BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17600
(351 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 39/260 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY++ME++PGGD++ L+ D + E+ +FY AE LA+D+IH +G IHRD+KPDN+LLD
Sbjct: 150 LYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 78 ARGHIKLSDFGLC-----TGLK-----------------KSHRTDFY--RDLSQAKPSDF 113
GH+KL+DFG C TG+ KS D Y R+ F
Sbjct: 209 KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 268
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
+ PF +++ TY K+M +++L FP + IS+ A+ I F ++ + RLG
Sbjct: 269 LFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGR- 327
Query: 168 RGVEELKSLGACQFFRGV--DWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
GVEE+K FF+ +WD+IRE A + ++ S D+SNFDD D K ++ + P+
Sbjct: 328 NGVEEIKQ---HPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPI 384
Query: 226 PQDGEIIYKDWVFINYTFKR 245
P+ + FI +T+ R
Sbjct: 385 PK--AFVGNQLPFIGFTYYR 402
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
+ VGTPDYI+PEV G YG DWWS+GV ++EML+ F
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 45/280 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY++ME++PGGD++ L+ D + E+ +FY AE LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 144 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 202
Query: 78 ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
GH+KL+DFG C + KS D Y R+ F
Sbjct: 203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
Y PF +++ TY K+M+ +++L FP + IS+EA+ I F ++ + RLG
Sbjct: 263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 321
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
GVEE+K FF+ W+ +R+ A + + S DTSNFDD + K E + P+
Sbjct: 322 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 378
Query: 226 PQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSK 265
P+ + F+ +T+ +N + LSS NP D++
Sbjct: 379 PK--AFVGNQLPFVGFTYY---SNRRY---LSSANPNDNR 410
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
+ VGTPDYI+PEV G YG DWWS+GV +YEML+ F
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 45/280 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY++ME++PGGD++ L+ D + E+ +FY AE LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 78 ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
GH+KL+DFG C + KS D Y R+ F
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
Y PF +++ TY K+M+ +++L FP + IS+EA+ I F ++ + RLG
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 326
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
GVEE+K FF+ W+ +R+ A + + S DTSNFDD + K E + P+
Sbjct: 327 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 383
Query: 226 PQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSK 265
P+ + F+ +T+ +N + LSS NP D++
Sbjct: 384 PK--AFVGNQLPFVGFTYY---SNRRY---LSSANPNDNR 415
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
+ VGTPDYI+PEV G YG DWWS+GV +YEML+ F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 37/263 (14%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
D NLYL+M++ GGD++TLL K +D L EE +FY+AE +AIDS+H+L ++HRDIKPD
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPD 204
Query: 73 NLLLDARGHIKLSDFGLCTGLKKSHRT---------DFYR-DLSQAKPSD---------- 112
N+L+D GHI+L+DFG C L + D+ ++ QA
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 113 -----------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRFCSEC 160
+ PF +E+ ETY K+M+ ++ FP +V +SE A++ I R
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR 324
Query: 161 DRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEI 220
+ RLG G+E+ K FF G+DWD+IR A +V S DTSNFD D
Sbjct: 325 EHRLGQ-NGIEDFKKH---PFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNS 380
Query: 221 PSAPLPQDGEIIYKDWVFINYTF 243
+ P P F+ +T+
Sbjct: 381 ETMPPPTHTAFSGHHLPFVGFTY 403
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
VGTPDYI+PE+ ++ G YGP DWWSLGV MYEML F
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 126/240 (52%), Gaps = 43/240 (17%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D +LYL+M++ GGD++TLL K +D L E+ +FYI E LAIDSIH+L ++HRDIKP
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------- 116
DN+LLD GHI+L+DFG C LK + ++ P D+ P
Sbjct: 220 DNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTP-DYISPEILQAMEDGMGKYGP 276
Query: 117 -------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRF 156
PF +E+ ETY K+M+ + FP V +SEEA++ I R
Sbjct: 277 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 336
Query: 157 CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDV 216
+RRLG G+E+ K FF G++W++IR A V S DTSNFD DV
Sbjct: 337 ICSRERRLGQ-NGIEDFKKHA---FFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDV 392
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
VGTPDYI+PE+ ++ G YGP DWWSLGV MYEML F
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 126/240 (52%), Gaps = 43/240 (17%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D +LYL+M++ GGD++TLL K +D L E+ +FYI E LAIDSIH+L ++HRDIKP
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------- 116
DN+LLD GHI+L+DFG C LK + ++ P D+ P
Sbjct: 204 DNVLLDVNGHIRLADFGSC--LKMNDDGTVQSSVAVGTP-DYISPEILQAMEDGMGKYGP 260
Query: 117 -------------------PFCSENPQETYRKVMSWRDTLVFPPEVP-ISEEARETIVRF 156
PF +E+ ETY K+M+ + FP V +SEEA++ I R
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL 320
Query: 157 CSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDV 216
+RRLG G+E+ K FF G++W++IR A V S DTSNFD DV
Sbjct: 321 ICSRERRLGQ-NGIEDFKKHA---FFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDV 376
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 282 TVGTPDYIAPEVF--LQTG---YGPAADWWSLGVIMYEMLIAPEVF 322
VGTPDYI+PE+ ++ G YGP DWWSLGV MYEML F
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 37/242 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY++ME++PGGD++ L+ D + E+ +FY AE LA+D+IH +GFIHRD+KPDN+LLD
Sbjct: 149 LYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 78 ARGHIKLSDFGLCTGLK----------------------KSHRTDFY--RDLSQAKPSDF 113
GH+KL+DFG C + KS D Y R+ F
Sbjct: 208 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 114 SY------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECDRRLGSA 167
Y PF +++ TY K+M+ +++L FP + IS+EA+ I F ++ + RLG
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGR- 326
Query: 168 RGVEELKSLGACQFFRGVD--WDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPL 225
GVEE+K FF+ W+ +R+ A + + S DTSNFDD + K E + P+
Sbjct: 327 NGVEEIKR---HLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPI 383
Query: 226 PQ 227
P+
Sbjct: 384 PK 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 281 STVGTPDYIAPEVFLQTG----YGPAADWWSLGVIMYEMLIAPEVF 322
+ VGTPDYI+PEV G YG DWWS+GV +YEML+ F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 115/232 (49%), Gaps = 45/232 (19%)
Query: 18 LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LYL+ME+ GGD++TLL K + + E +FY+AE +AIDS+H+LG++HRDIKPDN+LL
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP-------------------- 116
D GHI+L+DFG C L+ R L D+ P
Sbjct: 196 DRCGHIRLADFGSCLKLRADGTV---RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECD 252
Query: 117 ----------------PFCSENPQETYRKVMSWRDTLVFP-PEVPISEEARETIVRFCSE 159
PF +++ ETY K++ +++ L P + + EEAR+ I R
Sbjct: 253 WWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP 312
Query: 160 CDRRLGSARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFD 211
+ RLG G + ++ FF G+DWD +R+ + DT NFD
Sbjct: 313 PETRLGRG-GAGDFRT---HPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFD 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 282 TVGTPDYIAPEVF-------LQTGYGPAADWWSLGVIMYEMLIAPEVF 322
VGTPDY++PE+ YGP DWW+LGV YEM F
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGGDM + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+IK++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 289 IAPEVFL--QTGYGPAAD-----------WWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
+ PE L Q GY AD W G Y +APE+ L GY A DWW+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY---LAPEIILSKGYNKAVDWWA 223
Query: 336 LGVIMYEM 343
LGV++YEM
Sbjct: 224 LGVLIYEM 231
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGGDM + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+IK++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 289 IAPEVFL--QTGYGPAAD-----------WWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
+ PE L Q GY AD W G Y +APE+ L GY A DWW+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY---LAPEIILSKGYNKAVDWWA 223
Query: 336 LGVIMYEM 343
LGV++YEM
Sbjct: 224 LGVLIYEM 231
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+IK++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 289 IAPEVFL--QTGYGPAAD-----------WWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
+ PE L Q GY AD W G Y +APE+ L GY A DWW+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY---LAPEIILSKGYNKAVDWWA 223
Query: 336 LGVIMYEM 343
LGV++YEM
Sbjct: 224 LGVLIYEM 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
+KP+NLL+D +G+I+++DFG +K T + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
YPPF ++ P + Y K++S + + FP S + ++ + + +R G
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 283
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 284 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + ++ GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFGL +K RT + K D+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
+KP+NLL+D +G+I+++DFG +K T + K D+
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
YPPF ++ P + Y K++S + + FP S + ++ + + +R G
Sbjct: 213 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 268
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 269 NLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + ++ GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 172 GFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 301
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 302 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 358
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 273
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 274 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 182 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+I+++DFGL +K RT + K D+
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
YPPF ++ P + Y K++S + + FP S + ++ + + +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 284 LKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
YPPF ++ P + Y K++S + + FP S + ++ + + +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 284 LKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 37/237 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD+KP
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF------ 113
+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 114 ------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
YPPF ++ P + Y K++S + + FP S + ++ + + +R G+
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGN 283
Query: 167 AR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 284 LKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT----------DFYRDLSQAKPSDF----- 113
+KP+NLL+D +G+I+++DFG +K + T + K D+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
YPPF ++ P + Y K++S + + FP S + ++ + + +R G
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 303
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 304 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + ++ GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 302 AADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEM 343
A W G Y +APE+ L GY A DWW+LGV++YEM
Sbjct: 214 GATWTLCGTPEY---LAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY+++E+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+IK++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 289 IAPEVFL--QTGYGPAAD-----------WWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
+ PE L Q GY AD W G Y +APE+ L GY A DWW+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEY---LAPEIILSKGYNKAVDWWA 224
Query: 336 LGVIMYEM 343
LGV++YEM
Sbjct: 225 LGVLIYEM 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYLI+E+L GG++ L ++ E+ FY+AE ++A+ +H+ G I+RD+KP+N++L+
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 78 ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
+GH+KL+DFGLC G + + + D+
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
PPF EN ++T K++ + L PP +++EAR+ + + RLG+ G
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK--LNLPPY--LTQEARDLLKKLLKRNAASRLGAGPG-- 269
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
+ + A FFR ++W+ + R P + ++S +D S FD
Sbjct: 270 DAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ + GT +Y+APE+ +++G+ A DWWSLG +MY+ML F
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
G I Y +APE+ +++G+ A DWWSLG +MY+ML
Sbjct: 183 GTIEY---MAPEILMRSGHNRAVDWWSLGALMYDML 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 34/222 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYLI+E+L GG++ L ++ E+ FY+AE ++A+ +H+ G I+RD+KP+N++L+
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 78 ARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF----------- 113
+GH+KL+DFGLC G + + + D+
Sbjct: 156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 114 -SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
PPF EN ++T K++ + L PP +++EAR+ + + RLG+ G
Sbjct: 216 TGAPPFTGENRKKTIDKILKCK--LNLPPY--LTQEARDLLKKLLKRNAASRLGAGPG-- 269
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
+ + A FFR ++W+ + R P + ++S +D S FD
Sbjct: 270 DAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ ++ GT +Y+APE+ +++G+ A DWWSLG +MY+ML F
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
G I Y +APE+ +++G+ A DWWSLG +MY+ML
Sbjct: 183 GTIEY---MAPEILMRSGHNRAVDWWSLGALMYDML 215
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 273
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 274 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 179 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME+ PGG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+IK++DFG +K RT + K D+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++PGG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 281
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++ + ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 FGNLKNGVNDIXN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 33/238 (13%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLK----------KSHRTDFYRDLSQAKPSDF----- 113
+KP+NLL+D +G+I+++DFG +K ++ + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 114 -------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLG 165
YPPF ++ P + Y K++S + + FP S + ++ + + +R G
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFG 282
Query: 166 SAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 283 NLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+ +APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 39/241 (16%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--R 162
YPPF ++ P + Y K++S + + FP S + ++ ++R + D +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTK 279
Query: 163 RLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLE 219
R G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++
Sbjct: 280 RFGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Query: 220 I 220
+
Sbjct: 337 V 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKDGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++Y+M
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++Y+M
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 39/241 (16%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--R 162
YPPF ++ P + Y K++S + + FP S + ++ ++R + D +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTK 280
Query: 163 RLGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLE 219
R G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++
Sbjct: 281 RFGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Query: 220 I 220
+
Sbjct: 338 V 338
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 212 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 267
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 268 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 176 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKK----------------------SHRTDFYRDLS 106
+KP+NLL+D +G+I+++DFG +K + D++
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 107 QAKPSDFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSECD--RRL 164
YPPF ++ P + Y K++S + + FP S + ++ ++R + D +R
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKD-LLRNLLQVDLTKRF 281
Query: 165 GSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 282 GNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+AP + L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+AP + L GY A DWW+LGV++YEM
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + +E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NL++D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ + GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ + GY A DWW+LGV++YEM
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 189 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 301
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 302 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIAV 358
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 220 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 275
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 276 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 184 KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + E +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LYLI++FL GGD+ T L K+ +EE +FY+AE AL +D +H LG I+RD+KP+N+LL
Sbjct: 104 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL 163
Query: 77 DARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSD-FSYP------ 116
D GHIKL+DFGL G + + + +D +SY
Sbjct: 164 DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 117 -----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI-VRFCSECDRRLGSA-RG 169
PF ++ +ET ++ + + P+ +S EA+ + F RLGS G
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGM---PQF-LSTEAQSLLRALFKRNPANRLGSGPDG 279
Query: 170 VEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
EE+K F+ +DW+ + R P + V DDT FD
Sbjct: 280 AEEIKR---HVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
AYS GT +Y+APEV + G+ +ADWWS GV+M+EML
Sbjct: 187 AYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEMLIVS 347
G + Y +APEV + G+ +ADWWS GV+M+EML S
Sbjct: 192 GTVEY---MAPEVVNRQGHSHSADWWSYGVLMFEMLTGS 227
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKA 280
Query: 164 LGSAR-GVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ + GV ++K+ ++F DW I +R P + K DTSNFDD+ + ++ +
Sbjct: 281 FGNLKNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 36/224 (16%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LYLI++FL GGD+ T L K+ +EE +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 77 DARGHIKLSDFGLCT-------------GLKKSHRTDFYRDLSQAKPSDF---------- 113
D GHIKL+DFGL G + + + +D+
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
Query: 114 --SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI-VRFCSECDRRLGSA-RG 169
PF ++ +ET ++ + + P+ +S EA+ + + F RLG+ G
Sbjct: 220 LTGTLPFQGKDRKETMTMILKAKLGM---PQF-LSPEAQSLLRMLFKRNPANRLGAGPDG 275
Query: 170 VEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNFD 211
VEE+K FF +DW+ + R P + +DT FD
Sbjct: 276 VEEIKR---HSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
AYS GT +Y+APEV + G+ +ADWWS GV+M+EML
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 309 GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
G + Y +APEV + G+ +ADWWS GV+M+EML
Sbjct: 188 GTVEY---MAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LYLI++FL GGD+ T L K+ +EE +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 101 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
Query: 77 DARGHIKLSDFGLC 90
D GHIKL+DFGL
Sbjct: 161 DEEGHIKLTDFGLS 174
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
AYS GT +Y+APEV + G+ +ADWWS GV+M+EML
Sbjct: 184 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + G+ +ADWWS GV+M+EML
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEML 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LYLI++FL GGD+ T L K+ +EE +FY+AE ALA+D +H LG I+RD+KP+N+LL
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
Query: 77 DARGHIKLSDFGLC 90
D GHIKL+DFGL
Sbjct: 160 DEEGHIKLTDFGLS 173
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
AYS GT +Y+APEV + G+ +ADWWS GV+M+EML
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + G+ +ADWWS GV+M+EML
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 42/251 (16%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D +++IM+++ GG++ +LL K +FY AE LA++ +H I+RD+KP
Sbjct: 75 FQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKP 134
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRT-----DFYR-DLSQAKPSDFS----------- 114
+N+LLD GHIK++DFG + D+ ++ KP + S
Sbjct: 135 ENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIY 194
Query: 115 -----YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSAR 168
Y PF N +TY K+++ L FPP +E+ ++ + R + + +RLG+ +
Sbjct: 195 EMLAGYTPFYDSNTMKTYEKILNAE--LRFPPF--FNEDVKDLLSRLITRDLSQRLGNLQ 250
Query: 169 -GVEELKSLGACQFFRGVDWDHIRER----PAAIPVQVKSIDDTSNFDDFPD------VK 217
G E++K+ +F+ V W+ + R P P+Q + DTS FD +P+ V+
Sbjct: 251 NGTEDVKN---HPWFKEVVWEKLLSRNIETPYEPPIQ-QGQGDTSQFDKYPEEDINYGVQ 306
Query: 218 LEIPSAPLPQD 228
E P A L +D
Sbjct: 307 GEDPYADLFRD 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
+ Y GTPDYIAPEV Y + DWWS G+++YEML GY P D
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML--------AGYTPFYD 205
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPEV Y + DWWS G+++YEML
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEML 197
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 37/240 (15%)
Query: 9 QLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRD 68
+ D NLY++ME++ GG+M + L + SE +FY A+ L + +H L I+RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 69 IKPDNLLLDARGHIKLSDFGLCTGLKKSHRT------------DFYRDLSQAKPSDF--- 113
+KP+NLL+D +G+I+++DFG +K RT + K D+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
YPPF ++ P + Y K++S + + FP S + ++ + + +R
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKR 280
Query: 164 LGSA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEI 220
G+ GV ++K+ ++F DW I +R P + K DTSN DD+ + ++ +
Sbjct: 281 FGNLPNGVNDIKN---HKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEEIRV 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 270 SWKKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ K + + GTP+Y+APE+ L GY A DWW+LGV++YEM
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APE+ L GY A DWW+LGV++YEM
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 45/268 (16%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P L+ +MEF+ GGD+M + K E +FY AE A+ +H G I+RD+K DN+
Sbjct: 96 PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNV 155
Query: 75 LLDARGHIKLSDFGLCT-GLKKSHRT------------DFYRDLSQAKPSDF-------- 113
LLD GH KL+DFG+C G+ T + +++ D+
Sbjct: 156 LLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
Query: 114 ----SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGS-A 167
+ PF +EN + + +++ D +V+P + E+A + F ++ RLGS
Sbjct: 216 EMLCGHAPFEAENEDDLFEAILN--DEVVYP--TWLHEDATGILKSFMTKNPTMRLGSLT 271
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDDFPDVKLEIPSAPL 225
+G E ++ FF+ +DW + R P ++KS +D SNFD PD E P
Sbjct: 272 QGGEH--AILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD--PDFIKEEPVLXP 327
Query: 226 PQDGEI--IYKDWVFINYTFKRFEANSP 251
+G + I +D F+ FE SP
Sbjct: 328 IDEGHLPMINQD------EFRNFEYVSP 349
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTPDYIAPE+ + YGPA DWW++GV++YEML F
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY +ME++ GGD+M + + E FY AE ++ + +HK G I+RD+K DN++LD
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 78 ARGHIKLSDFGLCTGLKKSHRTD------FYRDLSQAKPSDFSY---------------- 115
+ GHIK++DFG+C K H D F P +Y
Sbjct: 155 SEGHIKIADFGMC----KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 210
Query: 116 -------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
PPF E+ E ++ +M + +P +S+EA ++ +RLG
Sbjct: 211 YEMLAGQPPFDGEDEDELFQSIME--HNVSYPKS--LSKEAVSICKGLMTKHPAKRLGC- 265
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTS-NFDDF 213
G E + + FFR +DW+ + R P + K + NFD F
Sbjct: 266 -GPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKGAENFDKF 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTPDYIAPE+ YG + DWW+ GV++YEML
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPE+ YG + DWW+ GV++YEML
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEML 214
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+ ++E++ GGD+M + ++ L EE +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 81 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 78 ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
+ GHIKL+D+G+C GL+ T + ++ + + FS
Sbjct: 141 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
PF S+NP + + ++ L +P +S +A + F ++ +
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 259
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
+ FFR VDWD + ++ P + +I D+F P P
Sbjct: 260 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 318
Query: 227 QDGEIIYK 234
D +I+ K
Sbjct: 319 DDDDIVRK 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
GTP+YIAPE+ YG + DWW+LGV+M+EM+ F G D + VI
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
Query: 340 MYEMLIVSRNIT 351
+ + + + R+++
Sbjct: 228 LEKQIRIPRSLS 239
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+ ++E++ GGD+M + ++ L EE +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 78 ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
+ GHIKL+D+G+C GL+ T + ++ + + FS
Sbjct: 145 SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
PF S+NP + + ++ L +P +S +A + F ++ +
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 263
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
+ FFR VDWD + ++ P + +I D+F P P
Sbjct: 264 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 322
Query: 227 QDGEIIYK 234
D +I+ K
Sbjct: 323 DDDDIVRK 330
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
GTP+YIAPE+ YG + DWW+LGV+M+EM+ F G D + VI
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
Query: 340 MYEMLIVSRNIT 351
+ + + + R+++
Sbjct: 232 LEKQIRIPRSLS 243
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 33/248 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+ ++E++ GGD+M + ++ L EE +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 78 ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSDFSY------------- 115
+ GHIKL+D+G+C GL+ T + ++ + + FS
Sbjct: 188 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 116 ---PPF----CSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCSECDRRLGS 166
PF S+NP + + ++ L +P +S +A + F ++ +
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG 306
Query: 167 ARGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLEIPSAPLP 226
+ FFR VDWD + ++ P + +I D+F P P
Sbjct: 307 CHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK-PNISGEFGLDNFDSQFTNEPVQLXP 365
Query: 227 QDGEIIYK 234
D +I+ K
Sbjct: 366 DDDDIVRK 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
GTP+YIAPE+ YG + DWW+LGV+M+EM+ F G D + VI
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
Query: 340 MYEMLIVSRNIT 351
+ + + + R+++
Sbjct: 275 LEKQIRIPRSLS 286
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
NL+ +ME+L GGD+M + FY AE L + +H G ++RD+K DN+LL
Sbjct: 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
Query: 77 DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
D GHIK++DFG+C G K +H D++
Sbjct: 152 DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
PF ++ +E + + D +P + +EA++ +V+ F E ++RLG RG
Sbjct: 212 LIGQSPFHGQDEEELFHSIRM--DNPFYPRW--LEKEAKDLLVKLFVREPEKRLG-VRG- 265
Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
+ FR ++W+ + + P +VKS D SNFD
Sbjct: 266 ----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTPDYIAPE+ L Y + DWWS GV++YEMLI F
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPE+ L Y + DWWS GV++YEMLI
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLI 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
NL+ +ME+L GGD+M + FY AE L + +H G ++RD+K DN+LL
Sbjct: 93 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
Query: 77 DARGHIKLSDFGLCT-------------------------GLKKSHRTDFYRDLSQAKPS 111
D GHIK++DFG+C G K +H D++
Sbjct: 153 DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 112 DFSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVR-FCSECDRRLGSARGV 170
PF ++ +E + + D +P + +EA++ +V+ F E ++RLG RG
Sbjct: 213 LIGQSPFHGQDEEELFHSIRM--DNPFYPRW--LEKEAKDLLVKLFVREPEKRLG-VRG- 266
Query: 171 EELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
+ FR ++W+ + + P +VKS D SNFD
Sbjct: 267 ----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTPDYIAPE+ L Y + DWWS GV++YEMLI F
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPE+ L Y + DWWS GV++YEMLI
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLI 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 35/222 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY +++++ GG++ L ++ E +FY AE A A+ +H L ++RD+KP+N+LLD
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173
Query: 78 ARGHIKLSDFGLCT-GLKKSHRTDFY--------RDLSQAKPSD---------------- 112
++GHI L+DFGLC ++ + T + ++ +P D
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 113 FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGSARGVE 171
+ PPF S N E Y +++ L P I+ AR + + +RLG+
Sbjct: 234 YGLPPFYSRNTAEMYDNILN--KPLQLKPN--ITNSARHLLEGLLQKDRTKRLGAKDDFM 289
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFD 211
E+KS FF ++WD + + P V +D +FD
Sbjct: 290 EIKS---HVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFD 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV + Y DWW LG ++YEML
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + Y DWW LG ++YEML
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+ ++E++ GGD+M + ++ L EE +FY AE +LA++ +H+ G I+RD+K DN+LLD
Sbjct: 96 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 78 ARGHIKLSDFGLCT-GLKKSHRTDFY 102
+ GHIKL+D+G+C GL+ T +
Sbjct: 156 SEGHIKLTDYGMCKEGLRPGDTTSXF 181
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADW----WSLGVI 339
GTP+YIAPE+ YG + DWW+LGV+M+EM+ F G D + VI
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
Query: 340 MYEMLIVSRNIT 351
+ + + + R+++
Sbjct: 243 LEKQIRIPRSMS 254
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L+LI++++ GG++ T L +++ +E Q Y+ E LA++ +HKLG I+RDIK +N+LL
Sbjct: 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
Query: 77 DARGHIKLSDFGLCT--------------GLKKSHRTDFYR--DLSQAKPSDF------- 113
D+ GH+ L+DFGL G + D R D K D+
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 114 -----SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFC-SECDRRLG 165
PF + + + ++ R L P P +S A++ I R + +RLG
Sbjct: 253 YELLTGASPFTVDGEKNSQAEIS--RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 310
Query: 166 SA-RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQ--VKSIDDTSNF 210
R +E+K FF+ ++WD + + P + ++ D SNF
Sbjct: 311 CGPRDADEIKE---HLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
IIY+D N +F LS D RA Y GT +Y+A
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA-----------YDFCGTIEYMA 228
Query: 291 PEVFL--QTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
P++ +G+ A DWWSLGV+MYE+L F G
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 51/271 (18%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY +ME++ GGD+M + + E FY AE A+ + + G I+RD+K DN++LD
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------------- 116
+ GHIK++DFG+C K + D D+ P
Sbjct: 156 SEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 117 --------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
PF E+ E ++ +M + +P +S+EA ++ +RLG
Sbjct: 212 YEMLAGQAPFEGEDEDELFQSIME--HNVAYPKS--MSKEAVAICKGLMTKHPGKRLGC- 266
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVKSID-DTSNFDDFPDVKLEIPSAPLP 226
G E + + FFR +DW+ + + P + K+ + NFD F P P
Sbjct: 267 -GPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAENFDRF---FTRHPPVLXP 322
Query: 227 QDGEII-------YKDWVFINYTFKRFEANS 250
D E+I ++ + F+N F + E S
Sbjct: 323 PDQEVIRNIDQSEFEGFXFVNSEFLKPEVKS 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTPDYIAPE+ YG + DWW+ GV++YEML F
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPE+ YG + DWW+ GV++YEML
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEML 215
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 51/271 (18%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY +ME++ GGD+M + + E FY AE A+ + + G I+RD+K DN++LD
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP--------------------- 116
+ GHIK++DFG+C K + D D+ P
Sbjct: 477 SEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 117 --------PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSEC-DRRLGSA 167
PF E+ E ++ +M + +P +S+EA ++ +RLG
Sbjct: 533 YEMLAGQAPFEGEDEDELFQSIME--HNVAYPKS--MSKEAVAICKGLMTKHPGKRLGC- 587
Query: 168 RGVEELKSLGACQFFRGVDWDHIRERPAAIPVQVK-SIDDTSNFDDFPDVKLEIPSAPLP 226
G E + + FFR +DW+ + + P + K S + NFD F P P
Sbjct: 588 -GPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGRNAENFDRF---FTRHPPVLXP 643
Query: 227 QDGEII-------YKDWVFINYTFKRFEANS 250
D E+I ++ + F+N F + E S
Sbjct: 644 PDQEVIRNIDQSEFEGFXFVNSEFLKPEVKS 674
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTPDYIAPE+ YG + DWW+ GV++YEML F
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPE+ YG + DWW+ GV++YEML
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEML 536
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
L +ME+ GG++ L ++ SE+ +FY AE A+D +H + ++RD+K +NL+L
Sbjct: 223 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
Query: 77 DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
D GHIK++DFGLC G+K D+ R + Y
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
C P + + K+ + + + FP + EA+ + + +RLG G E+
Sbjct: 343 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 398
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
K + +FF G+ W H+ E+ + P QV S DT FD+
Sbjct: 399 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
L +ME+ GG++ L ++ SE+ +FY AE A+D +H + ++RD+K +NL+L
Sbjct: 226 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 77 DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
D GHIK++DFGLC G+K D+ R + Y
Sbjct: 286 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
C P + + K+ + + + FP + EA+ + + +RLG G E+
Sbjct: 346 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 401
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
K + +FF G+ W H+ E+ + P QV S DT FD+
Sbjct: 402 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RTD L P +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RTD L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
L +ME+ GG++ L ++ SE+ +FY AE A+D +H + ++RD+K +NL+L
Sbjct: 85 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 144
Query: 77 DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
D GHIK++DFGLC G+K D+ R + Y
Sbjct: 145 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
C P + + K+ + + + FP + EA+ + + +RLG G E+
Sbjct: 205 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 260
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
K + +FF G+ W H+ E+ + P QV S DT FD+
Sbjct: 261 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
L +ME+ GG++ L ++ SE+ +FY AE A+D +H + ++RD+K +NL+L
Sbjct: 84 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 143
Query: 77 DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
D GHIK++DFGLC G+K D+ R + Y
Sbjct: 144 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
C P + + K+ + + + FP + EA+ + + +RLG G E+
Sbjct: 204 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 259
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
K + +FF G+ W H+ E+ + P QV S DT FD+
Sbjct: 260 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RTD L P +
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSE-CDRRLGSARG 169
PPF + QETYR++ R FP V +E AR+ I R +RL A
Sbjct: 203 FLVGMPPFEAHTYQETYRRIS--RVEFTFPDFV--TEGARDLISRLLKHNASQRLTLAEV 258
Query: 170 VEE 172
+E
Sbjct: 259 LEH 261
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GT DY+ PE+ + D WSLGV+ YE L+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLL 76
L +ME+ GG++ L ++ SE+ +FY AE A+D +H + ++RD+K +NL+L
Sbjct: 83 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 142
Query: 77 DARGHIKLSDFGLCT-GLKKS------------------HRTDFYRDLSQAKPSDFSYPP 117
D GHIK++DFGLC G+K D+ R + Y
Sbjct: 143 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
Query: 118 FCSENP--QETYRKV--MSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVEE 172
C P + + K+ + + + FP + EA+ + + +RLG G E+
Sbjct: 203 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGG--GSED 258
Query: 173 LKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
K + +FF G+ W H+ E+ + P QV S DT FD+
Sbjct: 259 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 300
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RTD L P +
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G++ L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT+ L P +
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYE 203
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE + D WSLGV+ YE L+ F Y
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G++ L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R L P +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 1 MKDYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIH 60
+K Y C + D LY + + G+++ + K + E CT+FY AE A++ +H
Sbjct: 100 VKLYFCFQ-----DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 61 KLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ---------- 107
G IHRD+KP+N+LL+ HI+++DFG L K R + + +Q
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 108 --AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARET 152
K SD PPF + N ++K++ FP + P + + E
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEK 272
Query: 153 IVRFCSECDRRLGSARGVEELKSLGACQFFRGVDWDHIRER 193
++ + +RLG +E L A FF V W+++ ++
Sbjct: 273 LLVL--DATKRLGCEE-MEGYGPLKAHPFFESVTWENLHQQ 310
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S R D L P
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 143 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 203 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 244
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S R L P
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCSE-CDRRLGSARG 169
PPF + QETYR++ R FP V +E AR+ I R +RL A
Sbjct: 203 FLVGMPPFEAHTYQETYRRIS--RVEFTFPDFV--TEGARDLISRLLKHNASQRLTLAEV 258
Query: 170 VEE 172
+E
Sbjct: 259 LEH 261
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GT DY+ PE+ + D WSLGV+ YE L+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 204 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 245
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 104 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 163
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 164 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP +AR+ + + + +R
Sbjct: 224 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FP--AAFFPKARDLVEKLLVLDATKR 279
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 280 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 308
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R D L P +
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 225 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 266
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 225 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 266
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 96 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 155
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 156 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 215
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 216 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 257
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S RT L P +
Sbjct: 140 LLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 78 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 137
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 138 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 197
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 198 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 239
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 210
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 98 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 273
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 274 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 302
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 277
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 278 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 306
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 76 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 135
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 136 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 195
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 196 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 237
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 83 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 142
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 143 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 203 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 258
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 259 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 287
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S RT L P
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL--DATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 49/293 (16%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P L I++ + GGD+ L + SE +FY AE L ++ +H ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75 LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
LLD GH+++SD GL KK H + + ++ +D+
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
+ PF +T K R TL E+P S E R + + +RRLG
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
RG +E+K FFR +DW + + P IP +V + D D +FD D +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
L L D E+ + I+ +++ A + F+ + T+ ++++++A++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAKN 544
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
+++VGT Y+APEV LQ G Y +ADW+SLG +++++L F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 79 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 138
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 139 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 199 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 254
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 255 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 283
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 78 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 137
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 138 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 198 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 253
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 254 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 282
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 49/293 (16%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P L I++ + GGD+ L + SE +FY AE L ++ +H ++RD+KP N+
Sbjct: 263 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 322
Query: 75 LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
LLD GH+++SD GL KK H + + ++ +D+
Sbjct: 323 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
+ PF +T K R TL E+P S E R + + +RRLG
Sbjct: 383 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 439
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
RG +E+K FFR +DW + + P IP +V + D D +FD D +K
Sbjct: 440 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 496
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
L L D E+ + I+ +++ A + F+ + T+ ++++++A++
Sbjct: 497 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKAKN 543
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
+++VGT Y+APEV LQ G Y +ADW+SLG +++++L F Q
Sbjct: 347 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 77 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 136
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 137 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 197 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 252
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 253 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 281
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 274
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 275 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 303
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A + VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 76 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 135
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 136 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 196 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 251
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 252 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 280
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 98 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPE-VPISEEARETIVRFCSECDRR 163
PPF + N ++K++ FP + P + + E ++ + +R
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEKFFPKARDLVEKLL--VLDATKR 273
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 274 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A S VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 277
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 278 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A S VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N + K++ FP + +AR+ + + + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLV 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G+++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N + K++ FP + +AR+ + + + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K+++FG S RT L P
Sbjct: 142 LLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K+++FG S RT L P +
Sbjct: 141 LLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 201 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 242
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R L P +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
+RRA + GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 164 SRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E+ PGG++ ++ +D LSEE T+ + A+ +H G+ HRD+KP+NLL D
Sbjct: 83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142
Query: 78 ARGHIKLSDFGLCT---GLKKSHRTDFYRDLSQAKP 110
+KL DFGLC G K H L+ A P
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
K N+ + G+ Y APE+ Y G AD WS+G+++Y ++
Sbjct: 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
D LY + + G ++ + K + E CT+FY AE A++ +H G IHRD+KP
Sbjct: 101 FQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 72 DNLLLDARGHIKLSDFGLCTGL---KKSHRTDFYRDLSQ------------AKPSDF--- 113
+N+LL+ HI+++DFG L K R + + +Q +K SD
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220
Query: 114 ---------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRR 163
PPF + N ++K++ FP + +AR+ + + + +R
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD--FPEK--FFPKARDLVEKLLVLDATKR 276
Query: 164 LGSARGVEELKSLGACQFFRGVDWDHIRER 193
LG +E L A FF V W+++ ++
Sbjct: 277 LGCEE-MEGYGPLKAHPFFESVTWENLHQQ 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++++A A S VGT Y++PE+ + ++D W+LG I+Y+++
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLV 228
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R L P +
Sbjct: 141 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 201 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 242
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S R L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
+RRA + GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 161 SRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 49/293 (16%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P L I++ + GGD+ L + SE +FY AE L ++ +H ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75 LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
LLD GH+++SD GL KK H + + ++ +D+
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
+ PF +T K R TL E+P S E R + + +RRLG
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
RG +E+K FFR +DW + + P IP +V + D D +FD D +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
L L D E+ + I+ +++ A + F+ + T+ ++++++ ++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKN 544
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
+++VGT Y+APEV LQ G Y +ADW+SLG +++++L F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 49/293 (16%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P L I++ + GGD+ L + SE +FY AE L ++ +H ++RD+KP N+
Sbjct: 264 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323
Query: 75 LLDARGHIKLSDFGLCTGL--KKSHRT----------DFYRDLSQAKPSDF--------- 113
LLD GH+++SD GL KK H + + ++ +D+
Sbjct: 324 LLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVP--ISEEARETIVRFCS-ECDRRLGS- 166
+ PF +T K R TL E+P S E R + + +RRLG
Sbjct: 384 LLRGHSPF---RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 167 ARGVEELKSLGACQFFRGVDWDHI---RERPAAIP--VQVKSID--DTSNFD--DFPDVK 217
RG +E+K FFR +DW + + P IP +V + D D +FD D +K
Sbjct: 441 GRGAQEVKE---SPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK 497
Query: 218 LEIPSAPLPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAES 270
L L D E+ + I+ +++ A + F+ + T+ ++++++ ++
Sbjct: 498 L------LDSDQELYRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKN 544
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 280 YSTVGTPDYIAPEVFLQTG--YGPAADWWSLGVIMYEMLIAPEVFLQ 324
+++VGT Y+APEV LQ G Y +ADW+SLG +++++L F Q
Sbjct: 348 HASVGTHGYMAPEV-LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S R L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R L P +
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 202 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 243
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 85 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 144
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 145 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 205 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 258
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 259 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 83 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 142
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 143 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 203 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 256
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 257 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 299
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPS---------------------D 112
LLL + G +K++DFG S R L P +
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 113 F--SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
F PPF + QETY+++ R FP V +E AR+ I R
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPDFV--TEGARDLISRL 241
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L +ME+ GG++ L ++ +EE +FY AE A++ +H ++RDIK +NL+LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 78 ARGHIKLSDFGLC-------TGLKKSHRTDFYRDLSQAKPSDFSYP-------------- 116
GHIK++DFGLC +K T Y + +D+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 117 ----PFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC-SECDRRLGSARGVE 171
PF +++ + + ++ + + FP +S EA+ + + +RLG G
Sbjct: 200 CGRLPFYNQDHERLFELILM--EEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGG--GPS 253
Query: 172 ELKSLGACQFFRGVDWDHIRERPAAIPV--QVKSIDDTSNFDD 212
+ K + +FF ++W + ++ P QV S DT FDD
Sbjct: 254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
GTP+Y+APEV YG A DWW LGV+MYEM+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV YG A DWW LGV+MYEM+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G + L K E+ T YI E A A+ H IHRDIKP+N
Sbjct: 79 DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPEN 138
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL + G +K++DFG S R L P
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRF 156
PPF + Q+TY+++ R FP V +E AR+ I R
Sbjct: 199 FLVGKPPFEANTYQDTYKRIS--RVEFTFPDFV--TEGARDLISRL 240
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
+RRA + GT DY+ PE+ + D WSLGV+ YE L+ F Y
Sbjct: 161 SRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
D +++++++ L GGD+ L + EE + +I E +A+D + IHRD+KPD
Sbjct: 85 QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPD 144
Query: 73 NLLLDARGHIKLSDFGLCTGL 93
N+LLD GH+ ++DF + L
Sbjct: 145 NILLDEHGHVHITDFNIAAML 165
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 275 RRALAYSTVGTPDYIAPEVFLQ---TGYGPAADWWSLGVIMYEML 316
R + GT Y+APE+F GY A DWWSLGV YE+L
Sbjct: 167 RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 317 IAPEVFLQ---TGYGPAADWWSLGVIMYEML 344
+APE+F GY A DWWSLGV YE+L
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELL 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D N YL+ME GG++ ++ + +E I + + +HK +HRD+KP+N
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN 166
Query: 74 LLLDAR---GHIKLSDFGLCT------GLKKSHRTDFY------RDLSQAKPSDFS---- 114
LLL+++ IK+ DFGL +K+ T +Y R K +S
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVI 226
Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS-ECDRRLGS 166
YPPF + QE RKV + T P +SE A++ I + + RR+ +
Sbjct: 227 LFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA 286
Query: 167 ARGVE 171
+ +E
Sbjct: 287 QQALE 291
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS+GVI++ +L
Sbjct: 199 LGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
LG Y IAPEV L+ Y D WS+GVI++ +L
Sbjct: 199 LGTAYY---IAPEV-LRKKYDEKCDVWSIGVILFILL 231
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 79 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 200
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL +E+ GG++ + + E Q + + + +H +G HRDIKP+NLLLD
Sbjct: 80 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
Query: 79 RGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
R ++K+SDFGL T + ++R + P
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
NR L GT Y+APE+ + + D WS G+++ ML
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YL++EF P G++ L K E+ + ++ E A A+ H+ IHRDIKP+N
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 74 LLLDARGHIKLSDFG------------LCTGLK---------KSHRTDFYRDLSQAKPSD 112
LL+ +G +K++DFG +C L K+H D DL A
Sbjct: 145 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLC 202
Query: 113 FSY----PPFCSENPQETYRKVMSWRDTLVFPP 141
+ + PPF S + ET+R++++ L FPP
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 233
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GT DY+ PE+ + D W GV+ YE L+
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YL++EF P G++ L K E+ + ++ E A A+ H+ IHRDIKP+N
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 74 LLLDARGHIKLSDFG------------LCTGLK---------KSHRTDFYRDLSQAKPSD 112
LL+ +G +K++DFG +C L K+H D DL A
Sbjct: 145 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLC 202
Query: 113 FSY----PPFCSENPQETYRKVMSWRDTLVFPP 141
+ + PPF S + ET+R++++ L FPP
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 233
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GT DY+ PE+ + D W GV+ YE L+
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YL++EF P G++ L K E+ + ++ E A A+ H+ IHRDIKP+N
Sbjct: 86 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 145
Query: 74 LLLDARGHIKLSDFG------------LCTGLK---------KSHRTDFYRDLSQAKPSD 112
LL+ +G +K++DFG +C L K+H D DL A
Sbjct: 146 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTH--DEKVDLWCAGVLC 203
Query: 113 FSY----PPFCSENPQETYRKVMSWRDTLVFPP 141
+ + PPF S + ET+R++++ L FPP
Sbjct: 204 YEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 234
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GT DY+ PE+ + D W GV+ YE L+
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+S P +++++ME++ GG++ + K L E+ ++ + +D H+ +HRD+KP
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKP 144
Query: 72 DNLLLDARGHIKLSDFGL 89
+N+LLDA + K++DFGL
Sbjct: 145 ENVLLDAHMNAKIADFGL 162
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
+ G+P+Y APEV Y GP D WS GVI+Y +L
Sbjct: 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y +L
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALL 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 28/167 (16%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPD 72
D YL+ EF GG++ ++ + +EC I + L+ I +HK +HRDIKP+
Sbjct: 117 DKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYLHKHNIVHRDIKPE 175
Query: 73 NLLLDARG---HIKLSDFGLCTGLKKSHR------TDFYR--DLSQAKPSD--------- 112
N+LL+ + +IK+ DFGL + K ++ T +Y ++ + K ++
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGV 235
Query: 113 ------FSYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
YPPF +N Q+ +KV + F IS+EA+E I
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI 282
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVIMY +L
Sbjct: 209 LGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILL 241
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
LG Y IAPEV L+ Y D WS GVIMY +L
Sbjct: 209 LGTAYY---IAPEV-LKKKYNEKCDVWSCGVIMYILL 241
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 117 LWVVMEFLEGG-ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 78 ARGHIKLSDFGLCTGLKK 95
+ G IKLSDFG C + K
Sbjct: 176 SDGRIKLSDFGFCAQVSK 193
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APEV + YG D WSLG+++ EM+
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YG D WSLG+++ EM+
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 223 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 282 HDGRVKLSDFGFCAQVSK 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMV 341
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+LY++ E + G +M + K LSE+ +FY + I+ +H IHRDIKP NLL+
Sbjct: 112 HLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170
Query: 77 DARGHIKLSDFGLCTGLKKS 96
GHIK++DFG+ K S
Sbjct: 171 GEDGHIKIADFGVSNEFKGS 190
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 273 KNRRALAYSTVGTPDYIAPEVFLQTGY---GPAADWWSLGVIMY 313
K AL +TVGTP ++APE +T G A D W++GV +Y
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+S P + +++ME++ GG++ + K + E + + A+D H+ +HRD+KP
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
+N+LLDA + K++DFGL + +F RD
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDG---EFLRD 169
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
+ G+P+Y APEV Y GP D WS GVI+Y +L
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y +L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 1 MKDYACLKQLRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAI 56
M+DY + M L+++MEFL GG +T ++ + L+EE A+
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG-ALTDIVSQVRLNEEQIATVCEAVLQAL 154
Query: 57 DSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
+H G IHRDIK D++LL G +KLSDFG C + K
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APEV ++ Y D WSLG+++ EM+
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV ++ Y D WSLG+++ EM+
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 101 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 160 HDGRVKLSDFGFCAQVSK 177
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 103 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 162 HDGRVKLSDFGFCAQVSK 179
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 146 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 205 HDGRVKLSDFGFCAQVSK 222
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMV 264
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 92 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 151 HDGRVKLSDFGFCAQVSK 168
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L+++MEFL GG +T ++ ++EE A+ +H G IHRDIK D++LL
Sbjct: 96 LWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
Query: 78 ARGHIKLSDFGLCTGLKK 95
G +KLSDFG C + K
Sbjct: 155 HDGRVKLSDFGFCAQVSK 172
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APE+ + YGP D WSLG+++ EM+
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ + YGP D WSLG+++ EM+
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMV 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+S P + +++ME++ GG++ + K + E + + A+D H+ +HRD+KP
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72 DNLLLDARGHIKLSDFGL 89
+N+LLDA + K++DFGL
Sbjct: 140 ENVLLDAHMNAKIADFGL 157
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
++ G+P+Y APEV Y GP D WS GVI+Y +L
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y +L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +LYL+M+ + GG++ +++K +E+ I + A+ +H++G +HRD+KP+NL
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 75 LL---DARGHIKLSDFGL 89
L D I +SDFGL
Sbjct: 152 LYYSQDEESKIMISDFGL 169
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILL 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I+ YL+ + + GG++ ++ ++ SE I + A+ H++G +
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 125
Query: 66 HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HRD+KP+NLLL ++ +KL+DFGL ++ + + R + K
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
P D YPPF E+ + Y+++ + P ++ EA+ I
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLV 201
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 43/258 (16%)
Query: 18 LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L L++ + GGD+ + M + E FY AE ++ +H+ ++RD+KP+N+L
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 76 LDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYPP------------ 117
LD GHI++SD GL + + T Y K +++ P
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 118 FCSENPQETYRKVMSWRDTLVFPPEVP------ISEEARETIVR-FCSECDRRL----GS 166
++P + +K + + EVP S +AR + C + RL GS
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 167 ARGVEELKSLGACQFFR-GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLE------ 219
AR V+E F R G +P + K + D F V+LE
Sbjct: 439 AREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDF 498
Query: 220 -----IPSAPLPQDGEII 232
S P+P E++
Sbjct: 499 YQKFATGSVPIPWQNEMV 516
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
VGT Y+APEV Y + DWW+LG ++YEM+ F Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+G + Y +APEV Y + DWW+LG ++YEM+
Sbjct: 346 VGTVGY---MAPEVVKNERYTFSPDWWALGCLLYEMI 379
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+L+ + + G++ L +K TLSE+ T+ + I ++HKL +HRD+KP+N+LLD
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 78 ARGHIKLSDFGLCTGL 93
+IKL+DFG L
Sbjct: 159 DDMNIKLTDFGFSCQL 174
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 284 GTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEML 316
GTP Y+APE+ GYG D WS GVIMY +L
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 326 GYGPAADWWSLGVIMYEML 344
GYG D WS GVIMY +L
Sbjct: 205 GYGKEVDMWSTGVIMYTLL 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+L+ + + G++ L +K TLSE+ T+ + I ++HKL +HRD+KP+N+LLD
Sbjct: 99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 158
Query: 78 ARGHIKLSDFGLCTGL 93
+IKL+DFG L
Sbjct: 159 DDMNIKLTDFGFSCQL 174
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 281 STVGTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEML 316
S GTP Y+APE+ GYG D WS GVIMY +L
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+L+ + + G++ L +K TLSE+ T+ + I ++HKL +HRD+KP+N+LLD
Sbjct: 86 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 78 ARGHIKLSDFGLCTGL 93
+IKL+DFG L
Sbjct: 146 DDMNIKLTDFGFSCQL 161
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 284 GTPDYIAPEVFL------QTGYGPAADWWSLGVIMYEML 316
GTP Y+APE+ GYG D WS GVIMY +L
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 326 GYGPAADWWSLGVIMYEML 344
GYG D WS GVIMY +L
Sbjct: 192 GYGKEVDMWSTGVIMYTLL 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 10 LRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I + YLI + + GG++ ++ ++ SE I + A+ H++G +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 66 HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HRD+KP+NLLL ++ +KL+DFGL ++ + + R K
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
P D YPPF E+ Y+++ + P ++ EA++ I +
Sbjct: 204 PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 263
Query: 158 S 158
+
Sbjct: 264 T 264
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLV 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 287
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
+L + GTP Y+APEV + G Y A D WSLGVI++ L +GY P ++
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL--------SGYPPFSE 346
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 301
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
+L + GTP Y+APEV + G Y A D WSLGVI++ L +GY P ++
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL--------SGYPPFSE 360
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
+L + GTP Y+APEV + G Y A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 43/258 (16%)
Query: 18 LYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L L++ + GGD+ + M + E FY AE ++ +H+ ++RD+KP+N+L
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 76 LDARGHIKLSDFGLCTGLKKSHR------TDFYRDLSQAKPSDFSYPP------------ 117
LD GHI++SD GL + + T Y K +++ P
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 118 FCSENPQETYRKVMSWRDTLVFPPEVP------ISEEARETIVR-FCSECDRRL----GS 166
++P + +K + + EVP S +AR + C + RL GS
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGS 438
Query: 167 ARGVEELKSLGACQFFR-GVDWDHIRERPAAIPVQVKSIDDTSNFDDFPDVKLE------ 219
AR V+E F R G +P + K + D F V+LE
Sbjct: 439 AREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDF 498
Query: 220 -----IPSAPLPQDGEII 232
S P+P E++
Sbjct: 499 YQKFATGSVPIPWQNEMV 516
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ 324
VGT Y+APEV Y + DWW+LG ++YEM+ F Q
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+G + Y +APEV Y + DWW+LG ++YEM+
Sbjct: 346 VGTVGY---MAPEVVKNERYTFSPDWWALGCLLYEMI 379
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D N YL+ME GG++ ++ + SE + + +HK +HRD+KP+N
Sbjct: 92 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPEN 151
Query: 74 LLLDARGH---IKLSDFGLC----TGLKKSHR--TDFY------RDLSQAKPSDFS---- 114
LLL+++ IK+ DFGL G K R T +Y R K +S
Sbjct: 152 LLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVI 211
Query: 115 -------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
YPPF + QE ++V + + P +S+EA++ +
Sbjct: 212 LYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVI+Y +L
Sbjct: 184 LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILL 216
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
LG Y IAPEV L+ Y D WS GVI+Y +L
Sbjct: 184 LGTAYY---IAPEV-LRKKYDEKCDVWSCGVILYILL 216
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
+L + GTP Y+APEV + G Y A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 72 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
+L + GTP Y+APEV + G Y A D WSLGVI++
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 73 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
+L + GTP Y+APEV + G Y A D WSLGVI++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
+LYLIM+ + GG++ +++K +E I + A+ +H LG +HRD+KP+NLL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76 --LDARGHIKLSDFGL 89
LD I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 3 DYACLKQLR-MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHK 61
++ C+ +++ D + Y+++E + GG++ ++ L E + Y + LA+ +H+
Sbjct: 79 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 62 LGFIHRDIKPDNLLLDARGH---IKLSDFG 88
G IHRD+KP+N+LL ++ IK++DFG
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTG---YGPAADWWSLGVIMY 313
+L + GTP Y+APEV + G Y A D WSLGVI++
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 20/121 (16%)
Query: 17 NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
L+L+MEF G + L+ K +TL EE + E + +H+ IHRDIK N+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 160
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF--------CSENPQET 126
LL +KL DFG+ L D + + + F P+ C ENP T
Sbjct: 161 LLTENAEVKLVDFGVSAQL----------DRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 127 Y 127
Y
Sbjct: 211 Y 211
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 283 VGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEM 315
+GTP ++APEV Y +D WSLG+ EM
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
+LYLIM+ + GG++ +++K +E I + A+ +H LG +HRD+KP+NLL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76 --LDARGHIKLSDFGL 89
LD I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 1 MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+ + A LKQL D N YL+ME GG++ ++ + SE +
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGH---IKLSDFGLC----TGLKKSHR--TDF 101
+ +HK +HRD+KP+NLLL+++ IK+ DFGL G K R T +
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 171
Query: 102 Y------RDLSQAKPSDFS-----------YPPFCSENPQETYRKVMSWRDTLVFPPEVP 144
Y R K +S YPPF + QE ++V + + P
Sbjct: 172 YIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
Query: 145 ISEEARETI 153
+S+EA++ +
Sbjct: 232 VSDEAKQLV 240
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVI+Y +L
Sbjct: 167 LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILL 199
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 308 LGVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
LG Y IAPEV L+ Y D WS GVI+Y +L
Sbjct: 167 LGTAYY---IAPEV-LRKKYDEKCDVWSCGVILYILL 199
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
+LYLIM+ + GG++ +++K +E I + A+ +H LG +HRD+KP+NLL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76 --LDARGHIKLSDFGL 89
LD I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 11 RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
R+ D N LY++ME+ GGD+ +++ K + L EE + + LA+ H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64 ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
+HRD+KP N+ LD + ++KL DFGL L +H DF ++
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKE 175
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP Y++PE + Y +D WSLG ++YE+
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
++PE + Y +D WSLG ++YE+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL- 75
+LYLIM+ + GG++ +++K +E I + A+ +H LG +HRD+KP+NLL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 76 --LDARGHIKLSDFGL 89
LD I +SDFGL
Sbjct: 150 YSLDEDSKIMISDFGL 165
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 11 RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
R+ D N LY++ME+ GGD+ +++ K + L EE + + LA+ H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64 ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
+HRD+KP N+ LD + ++KL DFGL L +H T F
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ A + VGTP Y++PE + Y +D WSLG ++YE+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
++PE + Y +D WSLG ++YE+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 11 RMSDPIN--LYLIMEFLPGGDMMTLLMK----KDTLSEECTQFYIAETALAIDSIHKLG- 63
R+ D N LY++ME+ GGD+ +++ K + L EE + + LA+ H+
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 64 ----FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDF 101
+HRD+KP N+ LD + ++KL DFGL L +H T F
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+ A + VGTP Y++PE + Y +D WSLG ++YE+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
++PE + Y +D WSLG ++YE+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
++ P ++ +++E+ GG++ +++K ++E+ + + + AI+ H+ +HRD+KP
Sbjct: 78 ITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 72 DNLLLDARGHIKLSDFGLCT 91
+NLLLD ++K++DFGL
Sbjct: 137 ENLLLDDNLNVKIADFGLSN 156
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
++ G+P+Y APEV Y GP D WS G+++Y ML+
Sbjct: 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEMLI 345
APEV Y GP D WS G+++Y ML+
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLV 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 10 LRMSDPI----NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I + YLI + + GG++ ++ ++ SE I + A+ H++G +
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 132
Query: 66 HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HR++KP+NLLL ++ +KL+DFGL ++ + + R K
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
P D YPPF E+ Y+++ + P ++ EA++ I +
Sbjct: 193 PVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 252
Query: 158 S 158
+
Sbjct: 253 T 253
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLV 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYLIME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 148
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG + D +
Sbjct: 149 ADMNIKIADFGFSNEFTVGGKLDAF 173
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLV 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDAF 172
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D ++ +L+ME L GG++ + KK SE + + + A+ +H +G +HRD+KP+N
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 74 LLLDARG---HIKLSDFGL 89
LL IK+ DFG
Sbjct: 137 LLFTDENDNLEIKIIDFGF 155
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
T Y APE+ Q GY + D WSLGVI+Y ML
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTML 203
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE+ Q GY + D WSLGVI+Y ML
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTML 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTF 172
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYLIME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 86 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 145
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG + D +
Sbjct: 146 ADMNIKIADFGFSNEFTVGGKLDTF 170
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 205
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLV 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTD 100
A +IK++DFG ++ D
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLD 170
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 13/91 (14%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
L+++ME+L GG + D ++E C + IA E A++ +H IHRDIK D
Sbjct: 92 LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73 NLLLDARGHIKLSDFGLCTGL--KKSHRTDF 101
N+LL G +KL+DFG C + ++S R++
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEM 176
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APEV + YGP D WSLG++ EM+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YGP D WSLG++ EM+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D + YL+M F+ G + LMK + L E+ QF + + + IH G IHRD+KP
Sbjct: 99 LDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKP 156
Query: 72 DNLLLDARGHIKLSDFGLC 90
NL ++ +K+ DFGL
Sbjct: 157 GNLAVNEDCELKILDFGLA 175
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APEV L Y D WS+G IM EM+ +F
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 294 FLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G ++ APEV L Y D WS+G IM EM+
Sbjct: 169 ILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
+L L+M + GGD+ + D E FY A+ ++ +H+ I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73 NLLLDARGHIKLSDFGLCTGLKKSH 97
N+LLD G++++SD GL LK
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
GTP ++APE+ L Y + D+++LGV +YEM+ A F G
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ L Y + D+++LGV +YEM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 32/176 (18%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I+ YL+ + + GG++ ++ ++ SE I + +++ IH+ +
Sbjct: 93 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIV 152
Query: 66 HRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HRD+KP+NLLL ++ +KL+DFGL ++ + + R K
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGK 212
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
P D YPPF E+ + Y+++ + P ++ EA+ I
Sbjct: 213 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLV 228
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
+L L+M + GGD+ + D E FY A+ ++ +H+ I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73 NLLLDARGHIKLSDFGLCTGLKKSH 97
N+LLD G++++SD GL LK
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
GTP ++APE+ L Y + D+++LGV +YEM+ A F G
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ L Y + D+++LGV +YEM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
+L L+M + GGD+ + D E FY A+ ++ +H+ I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73 NLLLDARGHIKLSDFGLCTGLKKSH 97
N+LLD G++++SD GL LK
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
GTP ++APE+ L Y + D+++LGV +YEM+ A F G
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ L Y + D+++LGV +YEM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 89 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLD 148
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
+IK++DFG ++ D +
Sbjct: 149 GDMNIKIADFGFSNEFTVGNKLDTF 173
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLV 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT----LSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
+L L+M + GGD+ + D E FY A+ ++ +H+ I+RD+KP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 73 NLLLDARGHIKLSDFGLCTGLKKSH 97
N+LLD G++++SD GL LK
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQ 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTG 326
GTP ++APE+ L Y + D+++LGV +YEM+ A F G
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ L Y + D+++LGV +YEM+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D + Y++ E GG++ ++K+ SE I + I +HK +HRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
+N+LL+++ IK+ DFGL T +++ + T +Y R K +S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF +N + ++V + + P IS++A++ I + +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVI+Y +L
Sbjct: 184 IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPEV L+ Y D WS GVI+Y +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D + Y++ E GG++ ++K+ SE I + I +HK +HRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
+N+LL+++ IK+ DFGL T +++ + T +Y R K +S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF +N + ++V + + P IS++A++ I + +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVI+Y +L
Sbjct: 184 IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPEV L+ Y D WS GVI+Y +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
YL+ E + GG +++ + K+ +E + + A A+D +H G HRD+KP+N+L +
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 78 ARGH---IKLSDFGLCTGLK 94
+K+ DFGL +G+K
Sbjct: 146 HPNQVSPVKICDFGLGSGIK 165
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 283 VGTPDYIAPEV---FLQTG--YGPAADWWSLGVIMYEML 316
G+ +Y+APEV F + Y D WSLGVI+Y +L
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+Q+ + I L+ LI+E + GG++ L +K++LSEE +I +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
++ +H H D+KP+N++L + HIKL DFGL
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+Q+ + I L+ LI+E + GG++ L +K++LSEE +I +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
++ +H H D+KP+N++L + HIKL DFGL
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+Q+ + I L+ LI+E + GG++ L +K++LSEE +I +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
++ +H H D+KP+N++L + HIKL DFGL
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+Q+ + I L+ LI+E + GG++ L +K++LSEE +I +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
++ +H H D+KP+N++L + HIKL DFGL
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I+ YL+ + + GG++ ++ ++ SE I + +++ H G +
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HRD+KP+NLLL ++ +KL+DFGL ++ + + R K
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
P D YPPF E+ Y+++ + P ++ EA++ I +
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 158 S 158
+
Sbjct: 246 T 246
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLV 201
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
L+++ME+L GG + D ++E C + IA E A++ +H IHRDIK D
Sbjct: 93 LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 146
Query: 73 NLLLDARGHIKLSDFGLCTGL 93
N+LL G +KL+DFG C +
Sbjct: 147 NILLGMDGSVKLTDFGFCAQI 167
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APEV + YGP D WSLG++ EM+
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YGP D WSLG++ EM+
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+Q+ + I L+ LI+E + GG++ L +K++LSEE +I +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
++ +H H D+KP+N++L + HIKL DFGL
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
++L+ + + G++ L +K LSE+ T+ + A+ +H +HRD+KP+N+LLD
Sbjct: 175 MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 78 ARGHIKLSDFGLCTGLK 94
I+LSDFG L+
Sbjct: 235 DNMQIRLSDFGFSCHLE 251
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
Query: 284 GTPDYIAPEVF------LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLG 337
GTP Y+APE+ GYG D W+ GVI++ +L F W
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF----------WHRRQ 310
Query: 338 VIMYEMLI 345
++M M++
Sbjct: 311 ILMLRMIM 318
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I+ YL+ + + GG++ ++ ++ SE I + +++ H G +
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKSHRT-------------DFYRDLSQAK 109
HRD+KP+NLLL ++ +KL+DFGL ++ + + R K
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 110 PSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFC 157
P D YPPF E+ Y+++ + P ++ EA++ I +
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 158 S 158
+
Sbjct: 246 T 246
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + YG D W+ GVI+Y +L+
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + YG D W+ GVI+Y +L+
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLV 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
L+++ME+L GG + D ++E C + IA E A++ +H IHRDIK D
Sbjct: 92 LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73 NLLLDARGHIKLSDFGLCTGL 93
N+LL G +KL+DFG C +
Sbjct: 146 NILLGMDGSVKLTDFGFCAQI 166
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGTP ++APEV + YGP D WSLG++ EM+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YGP D WSLG++ EM+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
L+++ME+L GG + D ++E C + IA E A++ +H IHRDIK D
Sbjct: 92 LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 73 NLLLDARGHIKLSDFGLCTGL 93
N+LL G +KL+DFG C +
Sbjct: 146 NILLGMDGSVKLTDFGFCAQI 166
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ VGTP ++APEV + YGP D WSLG++ EM+
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YGP D WSLG++ EM+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
M++ LKQLR + +NL YL+ EF+ + L + + L + Q Y+
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
+ I H IHRDIKP+N+L+ G +KL DFG L
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ + YG A D W++G ++ EM + +F
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ME+ GG++ L+ + E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 81 LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 140
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 141 ADMNIKIADFGFSNEFTFGNKLDTF 165
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G+P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 200
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLV 200
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEFL-PGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E + P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 85 PDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTVYTDF 173
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D + Y++ E GG++ ++K+ SE I + I +HK +HRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFS-- 114
+N+LL+++ IK+ DFGL T +++ + T +Y R K +S
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAG 209
Query: 115 ---------YPPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF +N + ++V + + P IS++A++ I + +
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT 262
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L+ Y D WS GVI+Y +L
Sbjct: 184 IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
IAPEV L+ Y D WS GVI+Y +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+ LR I LY +++E+ G ++ ++++D +SE+ + + +
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
A++ H+ +HRD+KP+NLLLD ++K++DFGL
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 160
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
++ G+P+Y APEV Y GP D WS GVI+Y ML
Sbjct: 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y ML
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D YL+ E L GG ++ + K+ +E + + A A+D +H G HRD+KP+N
Sbjct: 82 DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPEN 141
Query: 74 LLLDA---RGHIKLSDFGLCTGLK 94
+L ++ +K+ DF L +G+K
Sbjct: 142 ILCESPEKVSPVKICDFDLGSGMK 165
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 284 GTPDYIAPEVF-----LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGV 338
G+ +Y+APEV T Y D WSLGV++Y ML F+ G+ A W G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV--GHCGADCGWDRGE 240
Query: 339 I 339
+
Sbjct: 241 V 241
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+ LR I LY +++E+ G ++ ++++D +SE+ + + +
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
A++ H+ +HRD+KP+NLLLD ++K++DFGL
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 161
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
++ G+P+Y APEV Y GP D WS GVI+Y ML
Sbjct: 171 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y ML
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+ LR I LY +++E+ G ++ ++++D +SE+ + + +
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 111
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
A++ H+ +HRD+KP+NLLLD ++K++DFGL
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 151
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
++ G+P+Y APEV Y GP D WS GVI+Y ML
Sbjct: 161 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y ML
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 3 DYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAET 52
+ A LK+++ + + L YL+M+ + GG++ ++++ +E+ I +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 53 ALAIDSIHKLGFIHRDIKPDNLLL---DARGHIKLSDFGL 89
A+ +H+ G +HRD+KP+NLL + I ++DFGL
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 272 KKNRRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
K + + + GTP Y+APEV Q Y A D WS+GVI Y +L
Sbjct: 157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Q Y A D WS+GVI Y +L
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILL 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L+++ME+ G + ++ ++ TL+E+ + T ++ +H + IHRDIK N+L
Sbjct: 98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL 157
Query: 76 LDARGHIKLSDFGLCTGL 93
L+ GH KL+DFG+ L
Sbjct: 158 LNTEGHAKLADFGVAGQL 175
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
+GTP ++APEV + GY AD WSLG+ EM
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 287 DYIAPEVFLQT-GYGPAADWWSLG-----------VIMYEMLIAPEVFLQTGYGPAADWW 334
D A + L T G+ AD+ G VI +APEV + GY AD W
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 335 SLGVIMYEM 343
SLG+ EM
Sbjct: 210 SLGITAIEM 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + L+ LR I LY +++E+ G ++ ++++D +SE+ + + +
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCT 91
A++ H+ +HRD+KP+NLLLD ++K++DFGL
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN 155
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
++ G+P+Y APEV Y GP D WS GVI+Y ML
Sbjct: 165 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APEV Y GP D WS GVI+Y ML
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++ LI+E + GG++ L +K++LSEE +I + ++ +H H D+KP+N++L
Sbjct: 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 77 DARG----HIKLSDFGLC 90
+ HIKL DFGL
Sbjct: 149 LDKNIPIPHIKLIDFGLA 166
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L++IME+L GG + LL K L E + E +D +H IHRDIK N+LL
Sbjct: 91 KLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL 149
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
+G +KL+DFG+ L TD +Q K + F PF
Sbjct: 150 SEQGDVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 181
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL H+ DF +
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 175
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 176 I----FGTPEFVA 184
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILL 210
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL H+ DF +
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 175
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 176 I----FGTPEFVA 184
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILL 210
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPAFVA 185
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP ++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI+E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL +H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECT-QFYIA----ETALAIDSIHKLGFIHRDIKPD 72
L+++ME+L GG + D ++E C + IA E A++ +H IHR+IK D
Sbjct: 93 LWVVMEYLAGGSL------TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSD 146
Query: 73 NLLLDARGHIKLSDFGLCTGL 93
N+LL G +KL+DFG C +
Sbjct: 147 NILLGMDGSVKLTDFGFCAQI 167
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+ VGTP ++APEV + YGP D WSLG++ EM+
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YGP D WSLG++ EM+
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ E+ GG++ L+ E+ + + A+ H+ +HRD+K +NLLLD
Sbjct: 88 LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFY 102
A +IK++DFG ++ D +
Sbjct: 148 ADXNIKIADFGFSNEFTFGNKLDAF 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 284 GTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEML 316
G P Y APE+F Y GP D WSLGVI+Y ++
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQTGY-GPAADWWSLGVIMYEML 344
APE+F Y GP D WSLGVI+Y ++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D YL+ E GG++ ++ + SE I + I +HK +HRD+KP+N
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 162
Query: 74 LLLDAR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY--- 115
LLL+++ +I++ DFGL T + S + T +Y K +S
Sbjct: 163 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 222
Query: 116 --------PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF N + +KV + T P +SE A++ I + +
Sbjct: 223 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 273
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L Y D WS GVI+Y +L
Sbjct: 195 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 227
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 85 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTVYTDF 173
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 84 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 143
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 144 ILIDLNRGELKLIDFGSGALLKDTVYTDF 172
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L++IME+L GG + LL + L E + E +D +H IHRDIK N+LL
Sbjct: 79 KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
G +KL+DFG+ L TD +Q K + F PF
Sbjct: 138 SEHGEVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 169
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 86 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 86 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L++IME+L GG + LL + L E + E +D +H IHRDIK N+LL
Sbjct: 94 KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 152
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
G +KL+DFG+ L TD +Q K + F PF
Sbjct: 153 SEHGEVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 184
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIEL 212
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 86 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDEN 140
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L++IME+L GG + LL + L E + E +D +H IHRDIK N+LL
Sbjct: 79 KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 137
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
G +KL+DFG+ L TD +Q K + F PF
Sbjct: 138 SEHGEVKLADFGVAGQL-----TD-----TQIKRNXFVGTPF 169
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ LKQL + + LY L+ E GG++ ++ + SE I
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR 157
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDAR---GHIKLSDFGLCTGLKKSHR------TDF 101
+ I +HK +HRD+KP+NLLL+++ +I++ DFGL T + S + T +
Sbjct: 158 QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 102 Y------RDLSQAKPSDFSY-----------PPFCSENPQETYRKVMSWRDTLVFPPEVP 144
Y K +S PPF N + +KV + T P
Sbjct: 218 YIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 277
Query: 145 ISEEARETIVRFCS 158
+SE A++ I + +
Sbjct: 278 VSESAKDLIRKMLT 291
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L Y D WS GVI+Y +L
Sbjct: 213 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 245
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
YL+ E GG++ ++ + SE I + I +HK +HRD+KP+NLLL+
Sbjct: 124 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE 183
Query: 78 AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
++ +I++ DFGL T + S + T +Y K +S
Sbjct: 184 SKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 243
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF N + +KV + T P +SE A++ I + +
Sbjct: 244 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 290
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L Y D WS GVI+Y +L
Sbjct: 212 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 244
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 100 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTVYTDF 188
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 100 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTVYTDF 188
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIH 66
L LR + ++YL+ +++ + +++ + L Q+ + + I +H G +H
Sbjct: 75 LNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLH 132
Query: 67 RDIKPDNLLLDARGHIKLSDFGL 89
RD+KP N+LL+A H+K++DFGL
Sbjct: 133 RDMKPSNILLNAECHVKVADFGL 155
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L T Y D WSLG I+ E+L +F
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL++++EF GG + ++++ + L+E Q +T A++ +H IHRD+K N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
G IKL+DFG+ K+ RT RD
Sbjct: 168 FTLDGDIKLADFGVSA---KNTRTIQRRD 193
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
D +II++D N F +F +S+ N +RR S +GTP
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD------------SFIGTP 199
Query: 287 DYIAPEVFL-QTG----YGPAADWWSLGVIMYEM 315
++APEV + +T Y AD WSLG+ + EM
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 101 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL++++EF GG + ++++ + L+E Q +T A++ +H IHRD+K N+L
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 140
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYR 103
G IKL+DFG+ K+ RT R
Sbjct: 141 FTLDGDIKLADFGVSA---KNTRTXIQR 165
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
D +II++D N F +F +S+ N +R +S+ +GTP
Sbjct: 125 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF-----------IGTP 173
Query: 287 DYIAPEVFL-----QTGYGPAADWWSLGVIMYEM 315
++APEV + Y AD WSLG+ + EM
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+L+ A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 152 TNAVKVVDFGIARAIADS 169
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 134 QNG-IIHRDVKPANILISATNAVKVVDFGIA---------RAIADSGNSVXQTAAVIGTA 183
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWW 334
Y++PE +D +SLG ++YE+L F TG P + +
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAY 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 108 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 167
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 168 ILIDLNRGELKLIDFGSGALLKDTVYTDF 196
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
YL+ E GG++ ++ + SE I + I +HK +HRD+KP+NLLL+
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE 160
Query: 78 AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
++ +I++ DFGL T + S + T +Y K +S
Sbjct: 161 SKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 220
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETIVRFCS 158
PPF N + +KV + T P +SE A++ I + +
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 267
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L Y D WS GVI+Y +L
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 179
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 180 ILIDLNRGELKLIDFGSGALLKDTVYTDF 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L++IME+L GG + LL + L E + E +D +H IHRDIK N+LL
Sbjct: 99 KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL 157
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
G +KL+DFG+ L TD +Q K + F PF
Sbjct: 158 SEHGEVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 189
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 217
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIEL 217
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 128 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTVYTDF 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 113 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 114 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE 51
++ + LK+++ + I L+ LI E + GG++ L +K++L+EE ++ +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+ +H L H D+KP+N++L R IK+ DFGL H+ DF +
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDFGNEFKN 176
Query: 108 AKPSDFSYPPFCS 120
F P F +
Sbjct: 177 I----FGTPEFVA 185
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILL 211
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
YL+ E + GG +++ + K+ +E + + A A+D +H G HRD+KP+N+L +
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 78 ARGH---IKLSDFGLCTGLK 94
+K+ DF L +G+K
Sbjct: 146 HPNQVSPVKICDFDLGSGIK 165
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 283 VGTPDYIAPEV---FLQTG--YGPAADWWSLGVIMYEML 316
G+ +Y+APEV F + Y D WSLGVI+Y +L
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 15 PINLYLIMEF-LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P + LI+E P D+ + ++ L EE + + + A+ H G +HRDIK +N
Sbjct: 133 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 192
Query: 74 LLLD-ARGHIKLSDFGLCTGLKKSHRTDF 101
+L+D RG +KL DFG LK + TDF
Sbjct: 193 ILIDLNRGELKLIDFGSGALLKDTVYTDF 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D ++YL+ E + GG+++ ++++ SE F + ++ +H G +HRD+KP N
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 74 LL-LDARGH---IKLSDFGLCTGLK 94
+L +D G+ +++ DFG L+
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLR 176
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
T +++APEV + GY D WSLG+++Y ML GY P A+
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTML--------AGYTPFAN 227
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + GY D WSLG+++Y ML
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTML 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D ++YL+ E + GG+++ ++++ SE F + ++ +H G +HRD+KP N
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 74 LL-LDARGH---IKLSDFGLCTGLK 94
+L +D G+ +++ DFG L+
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLR 176
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
T +++APEV + GY D WSLG+++Y ML GY P A+
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTML--------AGYTPFAN 227
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + GY D WSLG+++Y ML
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTML 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L++IME+L GG + LL + E + E +D +H IHRDIK N+LL
Sbjct: 96 LWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPF 118
+G +KL+DFG+ L TD +Q K + F PF
Sbjct: 155 EQGDVKLADFGVAGQL-----TD-----TQIKRNTFVGTPF 185
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
VGTP ++APEV Q+ Y AD WSLG+ E+
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 213
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
+APEV Q+ Y AD WSLG+ E+
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
YL+ E GG++ ++ + SE I + I HK +HRD+KP+NLLL+
Sbjct: 101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLE 160
Query: 78 AR---GHIKLSDFGLCTGLKKSHR------TDFY------RDLSQAKPSDFSY------- 115
++ +I++ DFGL T + S + T +Y K +S
Sbjct: 161 SKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYIL 220
Query: 116 ----PPFCSENPQETYRKVMSWRDTLVFPPEVPISEEARETI 153
PPF N + +KV + T P +SE A++ I
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+GT YIAPEV L Y D WS GVI+Y +L
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D +YLI+E+ P G++ L K T E+ T + E A A+ H IHRDIKP+N
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF-------------------- 113
LLL +G +K++DFG R L P
Sbjct: 154 LLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYE 213
Query: 114 ---SYPPFCSENPQETYRKVMSWRDTLVFPPEVPISEE 148
PPF S + ETYR+++ + L FP VP +
Sbjct: 214 LLVGNPPFESASHNETYRRIV--KVDLKFPASVPTGAQ 249
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GT DY+ PE+ + D W +GV+ YE+L+
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+++ A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 152 TNAVKVMDFGIARAIADS 169
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 134 QNG-IIHRDVKPANIMISATNAVKVMDFGIA---------RAIADSGNSVTQTAAVIGTA 183
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWW 334
Y++PE +D +SLG ++YE+L F TG P + +
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAY 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+++ A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 152 TNAVKVMDFGIARAIADS 169
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 134 QNG-IIHRDVKPANIMISATNAVKVMDFGIA---------RAIADSGNSVTQTAAVIGTA 183
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGP 329
Y++PE +D +SLG ++YE+L F TG P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+++ A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 152 TNAVKVMDFGIARAIADS 169
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 134 QNG-IIHRDVKPANIMISATNAVKVMDFGIA---------RAIADSGNSVTQTAAVIGTA 183
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWW 334
Y++PE +D +SLG ++YE+L F TG P + +
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAY 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+++ A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 152 TNAVKVMDFGIARAIADS 169
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 134 QNG-IIHRDVKPANIMISATNAVKVMDFGIA---------RAIADSGNSVTQTAAVIGTA 183
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWW 334
Y++PE +D +SLG ++YE+L F TG P + +
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAY 229
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL++++EF GG + ++++ + L+E Q +T A++ +H IHRD+K N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76 LDARGHIKLSDFGL 89
G IKL+DFG+
Sbjct: 168 FTLDGDIKLADFGV 181
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
D +II++D N F +F +S+ N +RR S +GTP
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD------------SFIGTP 199
Query: 287 DYIAPEVFL-QTG----YGPAADWWSLGVIMYEM 315
++APEV + +T Y AD WSLG+ + EM
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L++++EF PGG + ++++ D L+E Q + A++ +H IHRD+K N+L
Sbjct: 90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL 149
Query: 76 LDARGHIKLSDFGL-CTGLKKSHRTDFY 102
+ G I+L+DFG+ LK + D +
Sbjct: 150 MTLEGDIRLADFGVSAKNLKTLQKRDSF 177
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 273 KNRRALAY--STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEM 315
KN + L S +GTP ++APEV + T Y AD WSLG+ + EM
Sbjct: 166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL++++EF GG + ++++ + L+E Q +T A++ +H IHRD+K N+L
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 167
Query: 76 LDARGHIKLSDFGL 89
G IKL+DFG+
Sbjct: 168 FTLDGDIKLADFGV 181
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
D +II++D N F +F +S+ N +RR +GTP
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD------------XFIGTP 199
Query: 287 DYIAPEVFL-QTG----YGPAADWWSLGVIMYEM 315
++APEV + +T Y AD WSLG+ + EM
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
Y++ME++ G + ++ + ++ + IA+ A++ H+ G IHRD+KP N+++ A
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 79 RGHIKLSDFGLCTGLKKS 96
+K+ DFG+ + S
Sbjct: 169 TNAVKVMDFGIARAIADS 186
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 227 QDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTP 286
Q+G II++D N A +F ++ RA + N + +GT
Sbjct: 151 QNG-IIHRDVKPANIMISATNAVKVMDFGIA---------RAIADSGNSVTQTAAVIGTA 200
Query: 287 DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWW 334
Y++PE +D +SLG ++YE+L F TG P + +
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAY 246
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L++++EF PGG + ++++ D L+E Q + A++ +H IHRD+K N+L
Sbjct: 82 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL 141
Query: 76 LDARGHIKLSDFGL-CTGLKKSHRTDFY 102
+ G I+L+DFG+ LK + D +
Sbjct: 142 MTLEGDIRLADFGVSAKNLKTLQKRDSF 169
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 273 KNRRALAY--STVGTPDYIAPEVFL-----QTGYGPAADWWSLGVIMYEM 315
KN + L S +GTP ++APEV + T Y AD WSLG+ + EM
Sbjct: 158 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY+++E + D+ L L+EE + + L + IH+ G IHRD+KP N LL+
Sbjct: 105 LYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQ 107
+K+ DFGL + T+ DL +
Sbjct: 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEE 193
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 259 TNPMDSKRRAESWKKNRRALAYSTVGTPDYIAPE-VFLQTGYGPAADWWSLGVIMYEML 316
N ++ KN + S V T Y APE + LQ Y + D WS G I E+L
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGLC
Sbjct: 159 NEDSELKILDFGLC 172
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 25 LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIK 83
LP D+ + +K L E ++ + + AI H G +HRDIK +N+L+D RG K
Sbjct: 121 LPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK 180
Query: 84 LSDFGLCTGLKKSHRTDF 101
L DFG L TDF
Sbjct: 181 LIDFGSGALLHDEPYTDF 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I YL+ + + GG++ ++ ++ SE I + +I H G +
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 126
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
HR++KP+NLLL ++ +KL+DFGL + S
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 160
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + Y D W+ GVI+Y +L+
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + Y D W+ GVI+Y +L+
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLV 201
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I YL+ + + GG++ ++ ++ SE I + +I H G +
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
HR++KP+NLLL ++ +KL+DFGL + S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GTP Y++PEV + Y D W+ GVI+Y +L+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + Y D W+ GVI+Y +L+
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I YL+ + + GG++ ++ ++ SE I + +I H G +
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
HR++KP+NLLL ++ +KL+DFGL + S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP Y++PEV + Y D W+ GVI+Y +L+
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + Y D W+ GVI+Y +L+
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
D + LI+EFL GG++ + +D +SE Y+ + + +H+ +H DIKP+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPE 178
Query: 73 NLLLDAR--GHIKLSDFGLCTGL 93
N++ + + +K+ DFGL T L
Sbjct: 179 NIMCETKKASSVKIIDFGLATKL 201
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 243 FKRFEANSPFEFSLSSTNPMDSKRRAES---------WKKNRRALAYSTVGTPDYIAPEV 293
K +S + N M ++A S K N + T T ++ APE+
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI 221
Query: 294 FLQTGYGPAADWWSLGVIMYEML 316
+ G D W++GV+ Y +L
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLL 244
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+I E + + ++ LS++ Q++I +T A+ +H IHRD+KP NLL++
Sbjct: 89 VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78 ARGHIKLSDFGLCTGLKKS 96
+ +K+ DFGL + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+I E + + ++ LS++ Q++I +T A+ +H IHRD+KP NLL++
Sbjct: 89 VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78 ARGHIKLSDFGLCTGLKKS 96
+ +K+ DFGL + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+I E + + ++ LS++ Q++I +T A+ +H IHRD+KP NLL++
Sbjct: 89 VYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146
Query: 78 ARGHIKLSDFGLCTGLKKS 96
+ +K+ DFGL + +S
Sbjct: 147 SNCDLKVCDFGLARIIDES 165
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LY++ EF+ G D+ ++K+ SE Y+ + A+ H IHRD+KP+N
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPEN 160
Query: 74 LLLDARGH---IKLSDFGLCTGLKKS 96
+LL ++ + +KL DFG+ L +S
Sbjct: 161 VLLASKENSAPVKLGDFGVAIQLGES 186
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+A VGTP ++APEV + YG D W GVI++ +L
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YG D W GVI++ +L
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILL 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D +YL+ + G D+ ++ K LS+E QF + + + IH G IHRD+KP
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 72 DNLLLDARGHIKLSDFGLC 90
N+ ++ +++ DFGL
Sbjct: 160 SNVAVNEDSELRILDFGLA 178
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F + Y
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 294 FLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G + APE+ L Y D WS+G IM E+L
Sbjct: 172 ILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10 LRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
+R+ D I YL+ + + GG++ ++ ++ SE I + +I H G +
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 66 HRDIKPDNLLLDARGH---IKLSDFGLCTGLKKS 96
HR++KP+NLLL ++ +KL+DFGL + S
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GTP Y++PEV + Y D W+ GVI+Y +L+
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
++PEV + Y D W+ GVI+Y +L+
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLV 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 18 LYLIMEFLPGGDMMTLL--------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
L+L+M+ L GG ++ ++ K L E + E ++ +HK G IHRD+
Sbjct: 83 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 142
Query: 70 KPDNLLLDARGHIKLSDFGL 89
K N+LL G ++++DFG+
Sbjct: 143 KAGNILLGEDGSVQIADFGV 162
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
R + + VGTP ++APEV Q GY AD WS G+ E L TG P
Sbjct: 173 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE--------LATGAAPYHK 224
Query: 333 WWSLGVIMYEM 343
+ + V+M +
Sbjct: 225 YPPMKVLMLTL 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 18 LYLIMEFLPGGDMMTLL--------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDI 69
L+L+M+ L GG ++ ++ K L E + E ++ +HK G IHRD+
Sbjct: 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDV 147
Query: 70 KPDNLLLDARGHIKLSDFGL 89
K N+LL G ++++DFG+
Sbjct: 148 KAGNILLGEDGSVQIADFGV 167
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
R + + VGTP ++APEV Q GY AD WS G+ E L TG P
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE--------LATGAAPYHK 229
Query: 333 WWSLGVIMYEM 343
+ + V+M +
Sbjct: 230 YPPMKVLMLTL 240
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+N++ ME L GG + L+ ++ L E+ +Y+ + ++ +H +H D+K DN+L
Sbjct: 160 VNIF--MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 217
Query: 76 LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
L + G H L DFG +C GL KS T Y
Sbjct: 218 LSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKK-DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+YL++E G+M L + SE + ++ + + +H G +HRD+ NLLL
Sbjct: 86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDF 101
+IK++DFGL T LK H +
Sbjct: 146 TRNMNIKIADFGLATQLKMPHEKHY 170
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPDYIA 290
I+++D N R +F L++ M ++ Y+ GTP+YI+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH------------YTLCGTPNYIS 180
Query: 291 PEVFLQTGYGPAADWWSLGVIMYEMLIA 318
PE+ ++ +G +D WSLG + Y +LI
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIG 208
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
I+PE+ ++ +G +D WSLG + Y +LI
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLI 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
YL+ME++ G + + LS + + + I H + +HRDIKP N+L+D+
Sbjct: 87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 79 RGHIKLSDFGLCTGLKKSHRT 99
+K+ DFG+ L ++ T
Sbjct: 147 NKTLKIFDFGIAKALSETSLT 167
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+GT Y +PE D +S+G+++YEML+
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D ++YL+ME GG++ ++ K E + + A+ HKL HRD+KP+N
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN 136
Query: 74 LLL---DARGHIKLSDFGLCTGLK 94
L +KL DFGL K
Sbjct: 137 FLFLTDSPDSPLKLIDFGLAARFK 160
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 14/69 (20%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI------AP---EVFLQTGYG--- 328
+ VGTP Y++P+V L+ YGP D WS GV+MY +L AP EV L+ G
Sbjct: 167 TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 225
Query: 329 -PAADWWSL 336
P DW ++
Sbjct: 226 FPEKDWLNV 234
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
++P+V L+ YGP D WS GV+MY +L
Sbjct: 175 VSPQV-LEGLYGPECDEWSAGVMMYVLL 201
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 14 DPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
D ++YL+ME GG++ ++ K E + + A+ HKL HRD+KP+N
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN 153
Query: 74 LLL---DARGHIKLSDFGLCTGLK 94
L +KL DFGL K
Sbjct: 154 FLFLTDSPDSPLKLIDFGLAARFK 177
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 14/69 (20%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI------AP---EVFLQTGYG--- 328
+ VGTP Y++P+V L+ YGP D WS GV+MY +L AP EV L+ G
Sbjct: 184 TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 242
Query: 329 -PAADWWSL 336
P DW ++
Sbjct: 243 FPEKDWLNV 251
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
++P+V L+ YGP D WS GV+MY +L
Sbjct: 192 VSPQV-LEGLYGPECDEWSAGVMMYVLL 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+N++ ME L GG + L+ ++ L E+ +Y+ + ++ +H +H D+K DN+L
Sbjct: 141 VNIF--MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVL 198
Query: 76 LDARG-HIKLSDFGLCTGLK 94
L + G H L DFG L+
Sbjct: 199 LSSDGSHAALCDFGHAVCLQ 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D +YL+ + G D+ ++ K LS+E QF + + + IH G IHRD+KP
Sbjct: 102 IEDFSEVYLVTTLM-GADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 159
Query: 72 DNLLLDARGHIKLSDFGLC 90
N+ ++ +++ DFGL
Sbjct: 160 SNVAVNEDSELRILDFGLA 178
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F + Y
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 294 FLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G + APE+ L Y D WS+G IM E+L
Sbjct: 172 ILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++++ + D+ ++ L+ E ++++ + + +H IHRD+KP NLL+
Sbjct: 134 SVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 192
Query: 77 DARGHIKLSDFGLCTGLKKS 96
+ +K+ DFG+ GL S
Sbjct: 193 NENCELKIGDFGMARGLCTS 212
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y A D WS+G I EML ++F Y
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 269
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
Y+ +T LA+ +H G +H D+KP N+ L RG KL DFGL L
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
G P Y+APE+ LQ YG AAD +SLG+ + E+
Sbjct: 218 GDPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
STVGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L ++ME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 145
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K+ DFG
Sbjct: 146 LLDGSPAPRLKICDFG 161
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
STVGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L ++ME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K+ DFG
Sbjct: 147 LLDGSPAPRLKICDFG 162
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
STVGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L ++ME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K+ FG
Sbjct: 147 LLDGSPAPRLKICAFG 162
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++++ + D+ ++ L+ E ++++ + + +H IHRD+KP NLL+
Sbjct: 133 SVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191
Query: 77 DARGHIKLSDFGLCTGLKKS 96
+ +K+ DFG+ GL S
Sbjct: 192 NENCELKIGDFGMARGLCTS 211
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y A D WS+G I EML ++F Y
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 17 NLYLIMEFLPGGDMMTLL--MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+LY++M++ GGD+ + K E+ + + LA+ +H +HRDIK N+
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156
Query: 75 LLDARGHIKLSDFGLCTGLKKS 96
L G ++L DFG+ L +
Sbjct: 157 FLTKDGTVQLGDFGIARVLNST 178
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
LA + +GTP Y++PE+ Y +D W+LG ++YE+ F
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P + L++E + GG++ +++K SE + + A+ +H+ G +HRD+KP+NL
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENL 179
Query: 75 LLDA---RGHIKLSDFGL 89
L +K++DFGL
Sbjct: 180 LYATPAPDAPLKIADFGL 197
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 275 RRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ L + GTP Y APE+ YGP D WS+G+I Y +L E F
Sbjct: 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE+ YGP D WS+G+I Y +L
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILL 244
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ D +YL+ + G D+ ++ K LS+E QF + + + IH G IHRD+KP
Sbjct: 94 IEDFSEVYLVTTLM-GADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKP 151
Query: 72 DNLLLDARGHIKLSDFGLC 90
N+ ++ +++ DFGL
Sbjct: 152 SNVAVNEDCELRILDFGLA 170
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F + Y
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 294 FLQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G + APE+ L Y D WS+G IM E+L
Sbjct: 164 ILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
STVGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L +IME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K+ DFG
Sbjct: 148 LLDGSPAPRLKICDFG 163
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
N+ L+ +F+ + + L+ + Y+ T ++ +H+ +HRD+KP+NLLL
Sbjct: 86 NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145
Query: 77 DARGHIKLSDFGLCTGLKKSHRT 99
D G +KL+DFGL +R
Sbjct: 146 DENGVLKLADFGLAKSFGSPNRA 168
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 268 AESWKKNRRALAYSTVGTPDYIAPEV-FLQTGYGPAADWWSLGVIMYEMLI 317
A+S+ RA + V T Y APE+ F YG D W++G I+ E+L+
Sbjct: 159 AKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELLL 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 141 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 198
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 234
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L L+ EF+ L K L + + Y+ + + H+ +HRD+KP NLL++
Sbjct: 94 LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Query: 78 ARGHIKLSDFGLC 90
+ G +KL+DFGL
Sbjct: 154 SDGALKLADFGLA 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
L L+ EF+ L K L + + Y+ + + H+ +HRD+KP NLL++
Sbjct: 94 LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Query: 78 ARGHIKLSDFGLC 90
+ G +KL+DFGL
Sbjct: 154 SDGALKLADFGLA 166
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
L++ ME+ G + L+ + L+++ +++ + A+ IH G IHRD+KP N+
Sbjct: 90 LFIQMEYCENGTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 76 LDARGHIKLSDFGLCTGLKKS 96
+D ++K+ DFGL + +S
Sbjct: 149 IDESRNVKIGDFGLAKNVHRS 169
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
S +GT Y+A EV TG Y D +SLG+I +EM+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 307 SLGVIMYEMLIAPEVFLQTG-YGPAADWWSLGVIMYEML 344
++G MY +A EV TG Y D +SLG+I +EM+
Sbjct: 190 AIGTAMY---VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 79 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 136
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL-L 76
+Y++ E + GG+++ ++++ SE + ++ +H G +HRD+KP N+L +
Sbjct: 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 77 DARGH---IKLSDFGLCTGLK 94
D G+ I++ DFG L+
Sbjct: 151 DESGNPESIRICDFGFAKQLR 171
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
T +++APEV + GY A D WSLGV++Y ML TGY P A+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTML--------TGYTPFAN 222
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + GY A D WSLGV++Y ML
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTML 214
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 163
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 199
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ LL K LS + +++ + + IH +HRD+KP NLLL
Sbjct: 120 DVYLVTHLM-GADLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 178 NTTXDLKICDFGLA 191
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+ YL+M F+ D+ ++ K SEE Q+ + + + IH G +HRD+KP NL +
Sbjct: 103 DFYLVMPFMQT-DLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 NEDCELKILDFGLA 173
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 288 YIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
Y APEV L Y D WS+G IM EML +F Y
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 295 LQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G ++ APEV L Y D WS+G IM EML
Sbjct: 168 LDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDATLKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+GVIM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+GVIM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 98 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 155
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 156 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 191
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDATLKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+GVIM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+GVIM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 96 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 156 EDLEVKIGDFGLATKVE 172
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ GTP+YIAPEV + G+ D WS+G IMY +L+ F
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 152 EDLEVKIGDFGLATKVE 168
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP+YIAPEV + G+ D WS+G IMY +L+
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 114 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 174 EDLEVKIGDFGLATKVE 190
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WS+G IMY +L+ F
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 61 KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
K G IHRD+KP N+LLD RG IKL DFG+
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGI 171
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 90 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 150 EDLEVKIGDFGLATKVE 166
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
GTP+YIAPEV + G+ D WS+G IMY +L+
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ LKQL+ + +NL +L+ E+ + L + + E +
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
+T A++ HK IHRD+KP+N+L+ IKL DFG L +D+Y D
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDD 161
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 283 VGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEML 316
V T Y +PE+ + T YGP D W++G + E+L
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 282 TVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
TVGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L ++ME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K+ FG
Sbjct: 147 LLDGSPAPRLKICAFG 162
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 176 EDLEVKIGDFGLATKVE 192
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WS+G IMY +L+ F
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDATLKILDFGLA 173
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+++++E ++ L ++ L+E ++Y+ + L +H+ IHRD+K NL L+
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 152 EDLEVKIGDFGLATKVE 168
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+ GTP+YIAPEV + G+ D WS+G IMY +L+
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WS+G IMY +L+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDXELKILDFGLA 172
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
A+S VGTP Y++PE + GY +D WSLG ++YEM F YG + +SL
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF----YGDKMNLYSL 246
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLM----KKDTLSEECTQ 46
+K+ LKQL + I Y +++E GD+ ++ +K + E
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 47 FYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
Y + A++ +H +HRDIKP N+ + A G +KL D GL
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEM 343
++PE + GY +D WSLG ++YEM
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 281 STVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIA 318
S VGTP YIAPEV L+ Y G AD WS GV +Y ML+
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
P +L ++ME+ GG++ + SE+ +F+ + + H + HRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENT 146
Query: 75 LLDAR--GHIKLSDFG 88
LLD +K++DFG
Sbjct: 147 LLDGSPAPRLKIADFG 162
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDXTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+ YL+M F+ + M+ SEE Q+ + + + IH G +HRD+KP NL +
Sbjct: 121 DFYLVMPFMQTDLQKIMGME---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 178 NEDCELKILDFGLA 191
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 288 YIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
Y APEV L Y D WS+G IM EML +F Y
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 295 LQTGYGPAADWWSLGVIMYEMLIAPEVFLQ-TGYGPAADWWSLGVIMYEML 344
L G AD G ++ APEV L Y D WS+G IM EML
Sbjct: 186 LDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 3 DYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAE 51
+ + + QL ++ I LY L+ME++ GG++ ++ + L+E T ++ +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYRDLSQ-- 107
I +H++ +H D+KP+N+L R IK+ DFGL K + +
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFL 255
Query: 108 ----------AKPSDF------------SYPPFCSENPQETYRKVMSWRDTLVFPPEVPI 145
+ P+D PF +N ET +++ R L I
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315
Query: 146 SEEARETIVRF 156
SEEA+E I +
Sbjct: 316 SEEAKEFISKL 326
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APEV D WS+GVI Y +L FL
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L K + E+ + + + HK+ +HRD+KP N+
Sbjct: 82 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNI 139
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L +F S P
Sbjct: 140 LVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSP 175
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+A VGT Y++PE T Y +D WS+G+ + EM +
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL-L 76
+Y++ E GG+++ ++++ SE + ++ +H G +HRD+KP N+L +
Sbjct: 91 VYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 77 DARGH---IKLSDFGLCTGLK 94
D G+ I++ DFG L+
Sbjct: 151 DESGNPESIRICDFGFAKQLR 171
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
T +++APEV + GY A D WSLGV++Y L TGY P A+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXL--------TGYTPFAN 222
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + GY A D WSLGV++Y L
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXL 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+N++ ME L GG + L+ + L E+ +Y+ + ++ +H +H D+K DN+L
Sbjct: 125 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 182
Query: 76 LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
L + G L DFG LC GL KS T Y
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDXTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+N++ ME L GG + L+ + L E+ +Y+ + ++ +H +H D+K DN+L
Sbjct: 141 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 198
Query: 76 LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
L + G L DFG LC GL KS T Y
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 96 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 152
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 153 KSDXTLKILDFGLA 166
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+N++ ME L GG + L+ + L E+ +Y+ + ++ +H +H D+K DN+L
Sbjct: 139 VNIF--MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVL 196
Query: 76 LDARG-HIKLSDFG--LCT---GLKKSHRTDFY 102
L + G L DFG LC GL KS T Y
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 161 NEDSELKILDFGLA 174
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDXTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L + TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 18 LYLIMEFLPGGDMMTLLMKK-----DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
L +IME++P D + ++K ++ YI + A+ IH LG HRDIKP
Sbjct: 113 LNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 73 NLLLDARGH-IKLSDFG 88
NLL++++ + +KL DFG
Sbjct: 171 NLLVNSKDNTLKLCDFG 187
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L T Y P+ D WS+G + E+++ +F
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 307 SLGVIMYEMLIAPEVFL-QTGYGPAADWWSLGVIMYEMLI 345
S+ I APE+ L T Y P+ D WS+G + E+++
Sbjct: 198 SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 165 NEDSELKILDFGLA 178
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIMEFLP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 90 NLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 150 VENENRVKIGDFGLTKVL 167
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 230
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 141 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 198 KSDCTLKILDFGL 210
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L++ MEF G + + K+ + L + + +D IH IHRD+KP N+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 76 LDARGHIKLSDFGLCTGLKK-SHRTDFYRDLSQAKPSDFSYPPFCSE 121
L +K+ DFGL T LK RT L P S + E
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE 215
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
GT Y++PE YG D ++LG+I+ E+L + +T
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+ LIMEFLP G + L K K+ ++ + Y + +D + ++HRD+ N+L+
Sbjct: 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
++ +K+ DFGL ++ +D + P F Y P C
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPV-FWYAPEC 200
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE +Q+ + A+D WS GV ++E+L
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELL 223
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE +Q+ + A+D WS GV ++E+L
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
++ L+++R + I L+ LI+E + GG++ L +K++L+E E TQF +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 136
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
+ + +H H D+KP+N++L + IKL DFG+
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILL 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
++ L+++R + I L+ LI+E + GG++ L +K++L+E E TQF +
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 122
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
+ + +H H D+KP+N++L + IKL DFG+
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL 212
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSE-ECTQFYIA 50
++ L+++R + I L+ LI+E + GG++ L +K++L+E E TQF +
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF-LK 115
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARG----HIKLSDFGLC 90
+ + +H H D+KP+N++L + IKL DFG+
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
GTP+++APE+ G AD WS+GVI Y +L FL
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APE+ G AD WS+GVI Y +L
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILL 205
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY+++E + D+ L L+E+ + + L IH+ G IHRD+KP N LL+
Sbjct: 107 LYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN 165
Query: 78 ARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFCSENPQETYRKVMSW 133
+K+ DFGL + DL + + ++ P + Q T V W
Sbjct: 166 QDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW 221
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 273 KNRRALAYSTVGTPDYIAPE-VFLQTGYGPAADWWSLGVIMYEML 316
KN + S V T Y APE + LQ Y + D WS G I E+L
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETAL----AIDSIHKLGFIHRDIKPD 72
N+Y++ME GG+++ ++ + ++ Y+AE A+ H +H+D+KP+
Sbjct: 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 73 NLLL-DARGH--IKLSDFGLCTGLKK-SHRTD 100
N+L D H IK+ DFGL K H T+
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 231 IIYKDWVFINYTFKRFEANSPF---EFSLSSTNPMDSKRRAESWKKNRRALAYSTVGTPD 287
+++KD N F+ +SP +F L AE +K + + + GT
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGL-----------AELFKSDEHST--NAAGTAL 191
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y+APEVF + D WS GV+MY +L
Sbjct: 192 YMAPEVF-KRDVTFKCDIWSAGVVMYFLL 219
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+L+D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 141 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 198 KSDCTLKILDFGL 210
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 1 MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQF 47
+++ A +K+LR ++ P NL ++ E+L G + LL K ++ L E
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 48 YIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGL 89
+ A ++ +H +HRD+K NLL+D + +K+ DFGL
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
GTP+++APEV +D +S GVI++E+
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+ LIMEFLP G + L K K+ ++ + Y + +D + ++HRD+ N+L+
Sbjct: 88 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 147
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
++ +K+ DFGL ++ +D + P F Y P C
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPV-FWYAPEC 188
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE +Q+ + A+D WS GV ++E+L
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELL 211
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE +Q+ + A+D WS GV ++E+L
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDXTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 104 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM E++ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDH---IDQWN 235
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM E++
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 130 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 187
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 188 NEDCELKILDFGLA 201
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH 257
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 102 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 159 KSDCTLKILDFGL 171
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDATLKILDFGLA 173
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 9 QLRMSDP-INLYLIMEFLPGGDMMTLLMKKDTLSEE----CTQFYIAETALAIDSIHKLG 63
QL+ S P + LY+ M+ ++ + ++ +L + C +I + A A++ +H G
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI-QIAEAVEFLHSKG 184
Query: 64 FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
+HRD+KP N+ +K+ DFGL T + +
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 279 AYST----VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
AY+T VGT Y++PE Y D +SLG+I++E+L
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 96 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 153 KSDCTLKILDFGL 165
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 104 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 38 DTLSEECTQFYIAETALAIDSIHK-LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
D + EE T A++ + + L IHRDIKP N+LLD G+IKL DFG+ L S
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 225 LPQDGEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTVG 284
L ++ +II++D N R +F +S + +S K R A G
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG-------QLVDSIAKTRDA------G 187
Query: 285 TPDYIAPEVF----LQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
Y+APE + GY +D WSLG+ +YE L TG P W S+
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYE--------LATGRFPYPKWNSV 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 97 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 97 DVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
V T Y APEV L GY D WS+G IM EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 164 NEDXELKILDFGLA 177
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 164 NEDXELKILDFGLA 177
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDATLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 101 DVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 157
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 158 KSDCTLKILDFGLA 171
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM E++ +F T + D W+
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH---IDQWN 233
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM E++
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 112 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 170 NEDXELKILDFGLA 183
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
+L+ME LPG + +L + + E + ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 79 RGHIKLSDFG 88
R H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
+L+ME LPG + +L + + E + ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 79 RGHIKLSDFG 88
R H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 166 NEDCELKILDFGLA 179
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 36 KKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
K T+ E+ A++ +H KL IHRD+KP N+L++A G +K+ DFG+
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI 200
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
P+ I PE+ Q GY +D WSLG+ M E+ I
Sbjct: 221 APERINPELN-QKGYSVKSDIWSLGITMIELAI 252
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLIV 346
I PE+ Q GY +D WSLG+ M E+ I+
Sbjct: 225 INPELN-QKGYSVKSDIWSLGITMIELAIL 253
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 166 NEDCELKILDFGLA 179
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEEC---TQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME + GG + +L + + EE + + H++ +HRD+KP N+
Sbjct: 89 ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI--MHRDVKPSNI 146
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKP 110
L+++RG IKL DFG+ L S F S P
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAP 182
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 277 ALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
++A S VGT Y+APE T Y +D WS+G+ + E+ +
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 164 NEDCELKILDFGLA 177
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 111 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 168
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 169 NEDCELKILDFGLA 182
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 100 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 157
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 158 NEDCELKILDFGLA 171
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 166 NEDCELKILDFGLA 179
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 161 NEDCELKILDFGLA 174
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 161 NEDCELKILDFGLA 174
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 97 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 155 NEDCELKILDFGLA 168
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 171 NEDCELKILDFGLA 184
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 171 NEDCELKILDFGLA 184
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 113 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 170
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 171 NEDCELKILDFGLA 184
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 108 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 165
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 166 NEDCELKILDFGLA 179
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ + +K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 98 DVYLVTHLM-GADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 156 NEDCELKILDFGLA 169
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 2 KDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLM-KKDTLSEECTQFYIA 50
K+ + LR +NL+ +I EF+ GG++ + + + +SE+ Y+
Sbjct: 203 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYR----- 103
+ + +H+ ++H D+KP+N++ + +KL DFGL L
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 322
Query: 104 ---DLSQAKPSDF----------SY------PPFCSENPQETYRKVMS 132
++++ KP + SY PF EN ET R V S
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
T GT ++ APEV G D WS+GV+ Y +L
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 98 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 155
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 156 NEDCELKILDFGLA 169
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 99 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 156
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 157 NEDCELKILDFGLA 170
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 97 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 155 NEDCELKILDFGLA 168
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 167 HRKLRLIDWGLA 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 120 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 178 NEDCELKILDFGLA 191
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 124 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 182 NEDCELKILDFGLA 195
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 179 NEDCELKILDFGLA 192
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 106 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 163
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 164 NEDCELKILDFGLA 177
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 97 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 155 NEDCELKILDFGLA 168
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 103 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 160
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 161 NEDCELKILDFGLA 174
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 109 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 165
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 166 HRKLRLIDWGLA 177
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 120 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 177
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 178 NEDCELKILDFGLA 191
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 19/148 (12%)
Query: 1 MKDYACLKQLR----------MSDPINLYLIMEFLPGGDMMTLLMK---KDTLSEECTQF 47
+++ A +K+LR ++ P NL ++ E+L G + LL K ++ L E
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 48 YIAETALAIDSIHKLG--FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDL 105
+ A ++ +H +HR++K NLL+D + +K+ DFGL + LK S F
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL-SRLKAS---TFLSSK 197
Query: 106 SQAKPSDFSYPPFCSENPQETYRKVMSW 133
S A ++ P + P V S+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEM 315
S GTP+++APEV +D +S GVI++E+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 112 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 169
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 170 NEDCELKILDFGLA 183
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 159 NEDCELKILDFGLA 172
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 179 NEDCELKILDFGLA 192
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 121 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 178
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 179 NEDCELKILDFGLA 192
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 124 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 181
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 182 NEDCELKILDFGLA 195
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 18 LYLIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+ + ME +PGG + LL K +E+ FY + + +H +HRDIK DN+
Sbjct: 94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNV 153
Query: 75 LLDA-RGHIKLSDFG 88
L++ G +K+SDFG
Sbjct: 154 LINTYSGVLKISDFG 168
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 283 VGTPDYIAPEVFLQT--GYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGV 338
GT Y+APE+ + GYG AAD WSLG + EM F + G P A + +G+
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-PQAAMFKVGM 240
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 297 TGYGPAADWWSLGVIMYEMLIAPEVFLQT--GYGPAADWWSLGVIMYEM 343
G P + ++ G + Y +APE+ + GYG AAD WSLG + EM
Sbjct: 174 AGINPCTETFT-GTLQY---MAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+L L+ME++P G + L + ++ + + + +H +IHR++ N+LL
Sbjct: 92 SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLL 150
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
D +K+ DFGL + + H ++YR F Y P C
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 191
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE + + A+D WS GV +YE+L
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELL 214
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + + A+D WS GV +YE+L
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 165 NEDCELKILDFGLA 178
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WSLG I+Y +L+ F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+++E ++ L ++ ++E ++++ +T + +H IHRD+K NL L+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 177 DDMDVKIGDFGLATKIE 193
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WSLG I+Y +L+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 167 HRKLRLIDWGLA 178
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 168 HRKLRLIDWGLA 179
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WSLG I+Y +L+ F
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+++E ++ L ++ ++E ++++ +T + +H IHRD+K NL L+
Sbjct: 101 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 161 DDMDVKIGDFGLATKIE 177
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WSLG I+Y +L+
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLV 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WSLG I+Y +L+ F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+++E ++ L ++ ++E ++++ +T + +H IHRD+K NL L+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 177 DDMDVKIGDFGLATKIE 193
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WSLG I+Y +L+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 165 NEDCELKILDFGLA 178
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 107 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 164
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 165 NEDCELKILDFGLA 178
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
GTP+YIAPEV + G+ D WSLG I+Y +L+ F
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y+++E ++ L ++ ++E ++++ +T + +H IHRD+K NL L+
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 78 ARGHIKLSDFGLCTGLK 94
+K+ DFGL T ++
Sbjct: 177 DDMDVKIGDFGLATKIE 193
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLI 345
IAPEV + G+ D WSLG I+Y +L+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
+L+ME LPG + +L + + E + ++ ++ K GF H D++P N+++DA
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKKGFWHDDVRPWNVMVDA 374
Query: 79 RGHIKLSDFG 88
R H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 36 KKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
K T+ E+ A++ +H KL IHRD+KP N+L++A G +K+ DFG+
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI 156
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
P+ I PE+ Q GY +D WSLG+ M E+ I
Sbjct: 177 APERINPELN-QKGYSVKSDIWSLGITMIELAI 208
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEMLIV 346
I PE+ Q GY +D WSLG+ M E+ I+
Sbjct: 181 INPELN-QKGYSVKSDIWSLGITMIELAIL 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+L L+ME++P G + L + ++ + + + +H +IHR++ N+LL
Sbjct: 92 SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLL 150
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
D +K+ DFGL + + H ++YR F Y P C
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 191
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE + + A+D WS GV +YE+L
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELL 214
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + + A+D WS GV +YE+L
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+L L+ME++P G + L + ++ + + + +H +IHRD+ N+LL
Sbjct: 109 SLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
Query: 77 DARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
D +K+ DFGL + + H + YR F Y P C
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGH--EXYRVREDGDSPVFWYAPEC 208
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE + + A+D WS GV +YE+L
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELL 231
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + + A+D WS GV +YE+L
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ E + D L TL++ +FY+ E A+D H +G +HRD+KP N+++D
Sbjct: 116 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 80 GH-IKLSDFGLC 90
++L D+GL
Sbjct: 173 HRKLRLIDWGLA 184
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 20 LIMEFLPGGDMMTLLMKK---DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+ ME +PGG + LL K +E+ FY + + +H +HRDIK DN+L+
Sbjct: 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 141
Query: 77 DA-RGHIKLSDFG 88
+ G +K+SDFG
Sbjct: 142 NTYSGVLKISDFG 154
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 283 VGTPDYIAPEVFLQT--GYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSLGV 338
GT Y+APE+ + GYG AAD WSLG + EM F + G P A + +G+
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-PQAAMFKVGM 226
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 297 TGYGPAADWWSLGVIMYEMLIAPEVFLQT--GYGPAADWWSLGVIMYEM 343
G P + ++ G + Y +APE+ + GYG AAD WSLG + EM
Sbjct: 160 AGINPCTETFT-GTLQY---MAPEIIDKGPRGYGKAADIWSLGCTIIEM 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPD 72
D + +I EF+ GG++ + + + +SE+ Y+ + + +H+ ++H D+KP+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 73 NLLLDAR--GHIKLSDFGLCTGLKKSHRTDFYR--------DLSQAKPSDF--------- 113
N++ + +KL DFGL L ++++ KP +
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 114 -SY------PPFCSENPQETYRKVMS 132
SY PF EN ET R V S
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKS 264
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 282 TVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
T GT ++ APEV G D WS+GV+ Y +L
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 244
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F Y D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY---IDQWN 235
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F Y D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDY---IDQWN 235
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L L+ME+LP G + L + + L Y ++ ++ + +HRD+ N+L
Sbjct: 87 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 76 LDARGHIKLSDFGL 89
+++ H+K++DFGL
Sbjct: 147 VESEAHVKIADFGL 160
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 91 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 150
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 151 VENENRVKIGDFGLTKVL 168
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 231
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELF 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 105 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 162 KSDCTLKILDFGLA 175
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 237
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 86 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 145
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 146 VENENRVKIGDFGLTKVL 163
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 226
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 97 DVYLVTHLM-GADLNNIV-KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 154
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 155 NEDCELKILDFGLA 168
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 92 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 151
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 152 VENENRVKIGDFGLTKVL 169
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 232
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPP 117
++ +K+ DFGL L + +F++ + F Y P
Sbjct: 147 VENENRVKIGDFGLTKVLPQD--KEFFKVKEPGESPIFWYAP 186
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 227
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 97 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 154 KSDCTLKILDFGL 166
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APEV L GY D WS+G IM EM+ +F
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF 219
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L L+ME+LP G + L + + L Y ++ ++ + +HRD+ N+L
Sbjct: 88 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 76 LDARGHIKLSDFGL 89
+++ H+K++DFGL
Sbjct: 148 VESEAHVKIADFGL 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 94 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 153
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 154 VENENRVKIGDFGLTKVL 171
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 234
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L L+ME+LP G + L + + L Y ++ ++ + +HRD+ N+L
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 76 LDARGHIKLSDFGL 89
+++ H+K++DFGL
Sbjct: 160 VESEAHVKIADFGL 173
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 85 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 144
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 145 VENENRVKIGDFGLTKVL 162
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 225
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 90 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 150 VENENRVKIGDFGLTKVL 167
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 230
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 177
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 178 VENENRVKIGDFGLTKVL 195
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 258
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 108 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 165 KSDCTLKILDFGL 177
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F Y D W+
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY---IDQWN 240
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LYL +E+ P G+++ L K TLS + + A+ A +D + +
Sbjct: 91 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 150
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
FIHRD+ N+L+ K++DFGL G
Sbjct: 151 KQFIHRDLAARNILVGENYVAKIADFGLSRG 181
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L L+ME+LP G + L + + L Y ++ ++ + +HRD+ N+L
Sbjct: 84 ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 76 LDARGHIKLSDFGL 89
+++ H+K++DFGL
Sbjct: 144 VESEAHVKIADFGL 157
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 93 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 152
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 153 VENENRVKIGDFGLTKVL 170
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 233
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELF 217
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGL 172
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 147 VENENRVKIGDFGLTKVL 164
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 227
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL D+ T M L+ + Y+ + + H +HRD+KP N
Sbjct: 79 KLYLVFEFL-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LYL +E+ P G+++ L K TLS + + A+ A +D + +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
FIHRD+ N+L+ K++DFGL G
Sbjct: 161 KQFIHRDLAARNILVGENYVAKIADFGLSRG 191
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 103 DVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DFGL
Sbjct: 160 KSDCTLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 235
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ME + + M+ L E + + + I +H G IHRD+KP N+++
Sbjct: 104 DVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 77 DARGHIKLSDFGL 89
+ +K+ DFGL
Sbjct: 161 KSDCTLKILDFGL 173
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWS 335
V T Y APEV L GY D WS+G IM EM+ +F T + D W+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWN 236
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L GY D WS+G IM EM+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 146
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 147 VENENRVKIGDFGLTKVL 164
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 227
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
L++ ME+ + L+ + L+++ +++ + A+ IH G IHRD+KP N+
Sbjct: 90 LFIQMEYCENRTLYDLI-HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIF 148
Query: 76 LDARGHIKLSDFGLCTGLKKS 96
+D ++K+ DFGL + +S
Sbjct: 149 IDESRNVKIGDFGLAKNVHRS 169
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
S +GT Y+A EV TG Y D +SLG+I +EM+
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 307 SLGVIMYEMLIAPEVFLQTG-YGPAADWWSLGVIMYEML 344
++G MY +A EV TG Y D +SLG+I +EM+
Sbjct: 190 AIGTAMY---VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 164
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 165 VENENRVKIGDFGLTKVL 182
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 245
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 16/103 (15%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQ---F 47
+K+ A +K+++ + + L Y++ E++P G+++ L ++ EE T
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLL 133
Query: 48 YIA-ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
Y+A + + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL 176
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ + LK L+ ++ + L+ L+ E+L L + ++ + ++
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF 107
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+ + H+ +HRD+KP NLL++ RG +KL+DFGL
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHRD+ N+L
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 164
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 165 VENENRVKIGDFGLTKVL 182
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 245
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 2 KDYACLKQLRMSDPINL------------YLIMEFLPGGDMMTLLMKKDTLSEE----C- 44
K+ L++LR + I L Y++ME+ G M +L D++ E+ C
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEML---DSVPEKRFPVCQ 110
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
Y + ++ +H G +H+DIKP NLLL G +K+S G+ L D R
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 105 LSQAKPS 111
SQ P+
Sbjct: 171 -SQGSPA 176
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I+EF+ G+++ L + + +S +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 18 LYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L L+ME GG + L+ K++ + + + ++ + + + F+HRD+ N+LL
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL 143
Query: 77 DARGHIKLSDFGLCTGL 93
R + K+SDFGL L
Sbjct: 144 VNRHYAKISDFGLSKAL 160
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76 LDAR---GHIKLSDFGLC---TGLKKSHRTDFYRDLSQAKPSDFSYPPFCSEN 122
++ +KL+DFG TG K D + YPPF S +
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ D+GL
Sbjct: 159 NEDCELKILDYGLA 172
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I+EF+ G+++ L + + +S +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I+EF+ G+++ L + + +S +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 121 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 176
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 112 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 167
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-ARGHIKLSDFG 88
K T+ + Y+ + ++ IH +G HRDIKP NLLLD G +KL DFG
Sbjct: 135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 4 YACLKQLRMSDPINLYL----IMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSI 59
Y C ++ R I + L + E++ D L ++ TL + +T + +
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL--------LQQTTSGLAHL 134
Query: 60 HKLGFIHRDIKPDNLLL---DARGHIK--LSDFGLCTGLKKSHRTDFYRDLSQAKPSDFS 114
H L +HRD+KP N+L+ +A G IK +SDFGLC L R F R +
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG-RHSFSRRSGVPGTEGWI 193
Query: 115 YPPF----CSENPQET 126
P C ENP T
Sbjct: 194 APEMLSEDCKENPTYT 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ + LK+L+ S+ + LY L+ E L L + + L + ++
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+ I H +HRD+KP NLL++ G +K++DFGL
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ + LK+L+ S+ + LY L+ E L L + + L + ++
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+ I H +HRD+KP NLL++ G +K++DFGL
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 135 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 190
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ E + + ++ +S + Q+++ L + +H+ G +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 78 ARGHIKLSDFGLC 90
I + DF L
Sbjct: 169 DNNDITICDFNLA 181
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQF-----YIAETALAIDSIHKLGFIHRDIKPDNL 74
L+ME++P G + +D L C + + + +H +IHR + N+
Sbjct: 90 LVMEYVPLGSL------RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 143
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
LLD +K+ DFGL + + H ++YR F Y P C
Sbjct: 144 LLDNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 186
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE + + A+D WS GV +YE+L
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELL 209
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + + A+D WS GV +YE+L
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LYL+ E + + ++ +S + Q+++ L + +H+ G +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 78 ARGHIKLSDFGLC 90
I + DF L
Sbjct: 169 DNNDITICDFNLA 181
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ + LK+L+ S+ + LY L+ E L L + + L + ++
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+ I H +HRD+KP NLL++ G +K++DFGL
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 123 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 178
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQF-----YIAETALAIDSIHKLGFIHRDIKPDNL 74
L+ME++P G + +D L C + + + +H +IHR + N+
Sbjct: 89 LVMEYVPLGSL------RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV 142
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
LLD +K+ DFGL + + H ++YR F Y P C
Sbjct: 143 LLDNDRLVKIGDFGLAKAVPEGH--EYYRVREDGDSPVFWYAPEC 185
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEML 316
APE + + A+D WS GV +YE+L
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELL 208
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + + A+D WS GV +YE+L
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 164 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 201
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 164 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 201
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 163 LRKLRLIDWGLA 174
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 1 MKDYACLKQLRMSDPINLY----------LIMEFLPGG-----DMMTLLMKKDTLSEECT 45
+++ + +K+L+ + + LY L+ EF+ D T+ L
Sbjct: 51 IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLV 110
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+++ + + H+ +HRD+KP NLL++ RG +KL DFGL
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
L+K LS + +++ + + IH +HRD+KP NLL++ +K+ DFGL
Sbjct: 135 LLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 163 LRKLRLIDWGLA 174
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L K K+ + Y ++ ++ + +IHR++ N+L
Sbjct: 88 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNIL 147
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPP 117
++ +K+ DFGL L + ++Y+ + F Y P
Sbjct: 148 VENENRVKIGDFGLTKVLPQD--KEYYKVKEPGESPIFWYAP 187
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 228
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELF 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP+N
Sbjct: 78 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 135
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 107 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 164 LRKLRLIDWGLA 175
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 162 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 199
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 154 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 191
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 162 LRKLRLIDWGLA 173
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP+N
Sbjct: 77 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LY++ EF+ G D+ ++K+ SE Y+ + A+ H IHRD+KP
Sbjct: 103 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 162
Query: 74 LLLDARGH---IKLSDFGLCTGLKKS 96
+LL ++ + +KL FG+ L +S
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGES 188
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+A VGTP ++APEV + YG D W GVI++ +L
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 229
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 316 LIAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + YG D W GVI++ +L
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILL 229
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECT-------QFYIAETALAIDSIHKLGFIHRDI 69
LYL+ EFL ++ +KK + T + Y+ + + H +HRD+
Sbjct: 79 KLYLVFEFL------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 70 KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
KP+NLL++ G IKL+DFGL RT
Sbjct: 133 KPENLLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 144 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 181
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD----TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LY++ EF+ G D+ ++K+ SE Y+ + A+ H IHRD+KP
Sbjct: 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC 160
Query: 74 LLLDARGH---IKLSDFGLCTGLKKS 96
+LL ++ + +KL FG+ L +S
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGES 186
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
+A VGTP ++APEV + YG D W GVI++ +L
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 298 GYGPAADWWSLGVIM-----YEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
G+G A G++ +APEV + YG D W GVI++ +L
Sbjct: 176 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 33 LLMKKDTLSEECTQFYIAETALAIDSIH-KLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
++ K T+ E+ A++ +H KL IHRD+KP N+L++A G +K DFG+
Sbjct: 126 VIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI 183
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLI 317
P+ I PE+ Q GY +D WSLG+ E+ I
Sbjct: 204 APERINPELN-QKGYSVKSDIWSLGITXIELAI 235
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
LI E++ D L TL++ ++YI E A+D H G +HRD+KP N+++D
Sbjct: 126 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
Query: 80 -GHIKLSDFGLC 90
++L D+GL
Sbjct: 183 LRKLRLIDWGLA 194
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 148 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 185
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECT-------QFYIAETALAIDSIHKLGFIHRDI 69
LYL+ EFL ++ +KK + T + Y+ + + H +HRD+
Sbjct: 77 KLYLVFEFL------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 70 KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
KP+NLL++ G IKL+DFGL RT
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRT 160
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 142 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 179
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 19 YLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLG--FIHRDIKPDN 73
+L++ L G ++ L K ++ LS + +T A+ +H+ IHRD+K +N
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN 168
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDF 101
LLL +G IKL DFG T + SH D+
Sbjct: 169 LLLSNQGTIKLCDFGSATTI--SHYPDY 194
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
A+ IH G IHR++KP N+ +D ++K+ DFGL + +S
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 281 STVGTPDYIAPEVFLQTG-YGPAADWWSLGVIMYEML 316
S +GT Y+A EV TG Y D +SLG+I +E +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 8 KQLRMSDP-INLYLIMEFLPGGDMMTLLMKKDTLSEE----CTQFYIAETALAIDSIHKL 62
++L+ S P + LY+ M+ ++ + + T+ E C ++ + A A++ +H
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL-QIAEAVEFLHSK 137
Query: 63 GFIHRDIKPDNLLLDARGHIKLSDFGLCTGL 93
G +HRD+KP N+ +K+ DFGL T +
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
VGT Y++PE Y D +SLG+I++E+L
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LYL +E+ P G+++ L K TLS + + A+ A +D + +
Sbjct: 98 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTG 92
FIHR++ N+L+ K++DFGL G
Sbjct: 158 KQFIHRNLAARNILVGENYVAKIADFGLSRG 188
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 79 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 78 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 34 LMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L+K LS + +++ + + IH +HRD+KP NLLL+ +K+ DFGL
Sbjct: 119 LLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 283 VGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVF 322
V T Y APE+ L + GY + D WS+G I+ EML +F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 318 APEVFLQT-GYGPAADWWSLGVIMYEML 344
APE+ L + GY + D WS+G I+ EML
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 83 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 141 LLINTEGAIKLADFGLARAFGVPVRT 166
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 83 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 141 LLINTEGAIKLADFGLARAFGVPVRT 166
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 79 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 78 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 507 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 544
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 75 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 80 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT 163
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 75 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 80 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT 163
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 77 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I+EF+ G+++ L + + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 77 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ ++Y+ + K Y P C
Sbjct: 506 HYAKISDFGLSKALRADE--NYYKAQTHGKWPVKWYAPEC 543
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I+EF+ G+++ L + + ++ +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+D +H +HRD+KP N+L+ + G IKL+DFGL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
S V T Y APEV LQ+ Y D WS+G I EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV LQ+ Y D WS+G I EM
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 75 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 75 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+D +H +HRD+KP N+L+ + G IKL+DFGL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
S V T Y APEV LQ+ Y D WS+G I EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV LQ+ Y D WS+G I EM
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 76 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+D +H +HRD+KP N+L+ + G IKL+DFGL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
S V T Y APEV LQ+ Y D WS+G I EM
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV LQ+ Y D WS+G I EM
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 75 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP+N
Sbjct: 76 KLYLVFEFLHQD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 133
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT 159
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L++ MEF G + + K+ + L + + +D IH I+RD+KP N+
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 76 LDARGHIKLSDFGLCTGLK 94
L +K+ DFGL T LK
Sbjct: 155 LVDTKQVKIGDFGLVTSLK 173
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
GT Y++PE YG D ++LG+I+ E+L + +T
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 77 KLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT 160
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
NL ++ ++ G + L ++T + IA +TA +D +H IHRD+K +N+
Sbjct: 105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF 164
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 165 LHEGLTVKIGDFGLAT 180
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 154 YTSKRPNAILKLTDFGF 170
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 217
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 190 VAPEVLGPEKYDKSCDMWSLGVIMYILL 217
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 156 YTSKRPNAILKLTDFGF 172
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 219
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 192 VAPEVLGPEKYDKSCDMWSLGVIMYILL 219
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 1 MKDYACLKQLRMSDPINLY------------LIMEFLPGGDMMTLLMKKDT---LSEECT 45
M+++ LK+L + + L+ LIMEF P G + T+L + L E
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DARGHIKLSDFGLCTGLK 94
+ + ++ + + G +HR+IKP N++ D + KL+DFG L+
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 281 STVGTPDYIAPEVF--------LQTGYGPAADWWSLGVIMYE 314
S GT +Y+ P+++ Q YG D WS+GV Y
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 194 YTSKRPNAILKLTDFGF 210
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIMYILL 257
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 155 YTSKRPNAILKLTDFGF 171
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 218
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 191 VAPEVLGPEKYDKSCDMWSLGVIMYILL 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 150 YTSKRPNAILKLTDFGF 166
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 148 YTSKRPNAILKLTDFGF 164
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 211
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 148 YTSKRPNAILKLTDFGF 164
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 211
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 184 VAPEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-A 78
L+ E++ D L L++ +FY+ E A+D H G +HRD+KP N+++D
Sbjct: 112 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 79 RGHIKLSDFGLC 90
+ ++L D+GL
Sbjct: 169 QKKLRLIDWGLA 180
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 149 YTSKRPNAILKLTDFGF 165
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 212
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 185 VAPEVLGPEKYDKSCDMWSLGVIMYILL 212
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 150 YTSKRPNAILKLTDFGF 166
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 186 VAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 164 YTSKRPNAILKLTDFGF 180
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 227
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 200 VAPEVLGPEKYDKSCDMWSLGVIMYILL 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ FGL
Sbjct: 159 NEDCELKILGFGLA 172
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 1 MKDYACLKQLRMSDPINLY------------LIMEFLPGGDMMTLLMKKDT---LSEECT 45
M+++ LK+L + + L+ LIMEF P G + T+L + L E
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLL----DARGHIKLSDFG 88
+ + ++ + + G +HR+IKP N++ D + KL+DFG
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 284 GTPDYIAPEVF--------LQTGYGPAADWWSLGVIMYE 314
GT +Y+ P+++ Q YG D WS+GV Y
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 29/130 (22%)
Query: 7 LKQL-RMSDP--INLY--------LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA 55
L+QL R++ P + LY L+ME+ GG + +L + L +Y A A++
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMS 107
Query: 56 -----------IDSIHKLGFIHRDIKPDNLLLDARGHI-KLSDFGLCTGLKKSHRTDFYR 103
+ S+ IHRD+KP NLLL A G + K+ DFG + ++H T+
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKG 166
Query: 104 DLSQAKPSDF 113
+ P F
Sbjct: 167 SAAWMAPEVF 176
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPA 330
G+ ++APEVF + Y D +S G+I++E++ + F + G GPA
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG-GPA 211
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD-A 78
L+ E++ D L L++ +FY+ E A+D H G +HRD+KP N+++D
Sbjct: 117 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 79 RGHIKLSDFGLC 90
+ ++L D+GL
Sbjct: 174 QKKLRLIDWGLA 185
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 18 LYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L L+ME GG + L+ K++ + + + ++ + + + F+HR++ N+LL
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL 469
Query: 77 DARGHIKLSDFGLCTGL 93
R + K+SDFGL L
Sbjct: 470 VNRHYAKISDFGLSKAL 486
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ME L GG++ + + + +E + AI +H + HRD+KP+NLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 76 LDAR---GHIKLSDFG 88
++ +KL+DFG
Sbjct: 200 YTSKRPNAILKLTDFG 215
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVIMY +L
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 263
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 236 VAPEVLGPEKYDKSCDMWSLGVIMYILL 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + +S +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHR++ N L+ +K++DFGL
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 364
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+Y++ME + GGD +T L + L + + + A ++ + IHRD+ N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 77 DARGHIKLSDFGL 89
+ +K+SDFG+
Sbjct: 247 TEKNVLKISDFGM 259
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+Y++ME + GGD +T L + L + + + A ++ + IHRD+ N L+
Sbjct: 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 77 DARGHIKLSDFGL 89
+ +K+SDFG+
Sbjct: 247 TEKNVLKISDFGM 259
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALA-----------IDSIHKLGFIHRD 68
L+ME+ GG + +L + L +Y A A++ + S+ IHRD
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 69 IKPDNLLLDARGHI-KLSDFGLCTGLKKSHRTDFYRDLSQAKPSDF 113
+KP NLLL A G + K+ DFG + ++H T+ + P F
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDI-QTHMTNNKGSAAWMAPEVF 175
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPA 330
G+ ++APEVF + Y D +S G+I++E++ + F + G GPA
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG-GPA 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 81 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 140
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 141 LHEDNTVKIGDFGLAT 156
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 79 KLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 153 LHEDNTVKIGDFGLAT 168
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 153 LHEDNTVKIGDFGLAT 168
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSE---ECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
LYL+ EFL + M L+ + Y+ + + H +HRD+KP N
Sbjct: 78 KLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRT 99
LL++ G IKL+DFGL RT
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT 161
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 184 PQNLLLDPDTAVLKLCDFG 202
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ D GL
Sbjct: 159 NEDCELKILDAGLA 172
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 91 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 150
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 151 PQNLLLDPDTAVLKLCDFG 169
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 161
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 150 PQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 126 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 185
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 186 PQNLLLDPDTAVLKLCDFG 204
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 170
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 103 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 162
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 163 PQNLLLDPDTAVLKLCDFG 181
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 128 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 187
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 188 PQNLLLDPDTAVLKLCDFG 206
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 118 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 177
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 178 PQNLLLDPDTAVLKLCDFG 196
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 161
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 162 PQNLLLDPDTAVLKLCDFG 180
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 95 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 154
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 155 PQNLLLDPDTAVLKLCDFG 173
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 102 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 161
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 162 PQNLLLDPDTAVLKLCDFG 180
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 94 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 153
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 154 PQNLLLDPDTAVLKLCDFG 172
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 183
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 184 PQNLLLDPDTAVLKLCDFG 202
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 98 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 157
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 158 PQNLLLDPDTAVLKLCDFG 176
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHRD+ N L+ +K++DFGL
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 109 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 168
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 169 PQNLLLDPDTAVLKLCDFG 187
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 DPINLYLIMEFLPGGDMMTLLM---KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
D + L L+++++P K TL + Y+ + ++ IH G HRDIK
Sbjct: 169 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 228
Query: 71 PDNLLLDA-RGHIKLSDFG 88
P NLLLD +KL DFG
Sbjct: 229 PQNLLLDPDTAVLKLCDFG 247
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 11 RMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIK 70
R DP+ Y++ME++ G + +K ++E Y+ E A+ +H +G ++ D+K
Sbjct: 153 RHGDPVG-YIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYLHSIGLVYNDLK 209
Query: 71 PDNLLLDARGHIKLSDFGLCT 91
P+N++L +KL D G +
Sbjct: 210 PENIMLTEE-QLKLIDLGAVS 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L +IME + GG++ + + ++ +E + + AI +H HRD+KP+NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 142 YTSKEKDAVLKLTDFGF 158
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA-PEVFLQTG 326
TP Y+APEV Y + D WSLGVIMY +L P + TG
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 215
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIMYILL 204
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ D GL
Sbjct: 159 NEDCELKILDRGLA 172
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L +IME + GG++ + + ++ +E + + AI +H HRD+KP+NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 161 YTSKEKDAVLKLTDFGF 177
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA-PEVFLQTG 326
TP Y+APEV Y + D WSLGVIMY +L P + TG
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVIMY +L
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILL 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA-RGHIKLSDFG 88
K TL + Y+ + ++ IH G HRDIKP NLLLD +KL DFG
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG 168
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F T Y + D WS G ++ E+L+ +F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
+Y+I EF+ G ++ L + + + + A+ A + I + +IHRD++ N+L
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 76 LDARGHIKLSDFGLCTGLKKSHRT 99
+ A K++DFGL ++ + T
Sbjct: 144 VSASLVCKIADFGLARVIEDNEYT 167
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ D GL
Sbjct: 159 NEDCELKILDGGLA 172
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++YL+ + G D+ ++ K L+++ QF I + + IH IHRD+KP NL +
Sbjct: 101 DVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV 158
Query: 77 DARGHIKLSDFGLC 90
+ +K+ DF L
Sbjct: 159 NEDCELKILDFYLA 172
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 283 VGTPDYIAPEVFLQ-TGYGPAADWWSLGVIMYEMLIAPEVFLQTGY 327
V T Y APE+ L Y D WS+G IM E+L +F T +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR 79
L+ME G + L + + ++ + + ++ + + + F+HRD+ N+LL +
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 80 GHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYPPFC 119
+ K+SDFGL L+ + Y+ + K Y P C
Sbjct: 148 HYAKISDFGLSKALRADE--NXYKAQTHGKWPVKWYAPEC 185
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11 RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
R I + L+ E + D+ T L K L E + + + +D +H +HRD
Sbjct: 79 RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69 IKPDNLLLDARGHIKLSDFGLC 90
+KP+N+L+ + G +KL+DFGL
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y APEV LQ+ Y D WS+G I EM
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 289 IAPEVFLQTGYGPA--ADWWSLGVIMYEMLI----------APEVFLQTGYGPAADWWSL 336
+ PE L T G AD+ + Y+M + APEV LQ+ Y D WS+
Sbjct: 138 LKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 337 GVIMYEML 344
G I EM
Sbjct: 198 GCIFAEMF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11 RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
R I + L+ E + D+ T L K L E + + + +D +H +HRD
Sbjct: 79 RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69 IKPDNLLLDARGHIKLSDFGLC 90
+KP+N+L+ + G +KL+DFGL
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y APEV LQ+ Y D WS+G I EM
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 289 IAPEVFLQTGYGPA--ADWWSLGVIMYEMLIAP----------EVFLQTGYGPAADWWSL 336
+ PE L T G AD+ + Y+M +AP EV LQ+ Y D WS+
Sbjct: 138 LKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 337 GVIMYEML 344
G I EM
Sbjct: 198 GCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11 RMSDPINLYLIMEFLPGGDMMTLLMKKD--TLSEECTQFYIAETALAIDSIHKLGFIHRD 68
R I + L+ E + D+ T L K L E + + + +D +H +HRD
Sbjct: 79 RTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 137
Query: 69 IKPDNLLLDARGHIKLSDFGLC 90
+KP+N+L+ + G +KL+DFGL
Sbjct: 138 LKPENILVTSGGTVKLADFGLA 159
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y APEV LQ+ Y D WS+G I EM
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 289 IAPEVFLQTGYGPA--ADWWSLGVIMYEMLI----------APEVFLQTGYGPAADWWSL 336
+ PE L T G AD+ + Y+M + APEV LQ+ Y D WS+
Sbjct: 138 LKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 337 GVIMYEML 344
G I EM
Sbjct: 198 GCIFAEMF 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
+D +H +HRD+KP+N+L+ + G +KL+DFGL
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y APEV LQ+ Y D WS+G I EM
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 289 IAPEVFLQTGYGPA--ADWWSLGVIMYEMLI----------APEVFLQTGYGPAADWWSL 336
+ PE L T G AD+ + Y+M + APEV LQ+ Y D WS+
Sbjct: 146 LKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSV 205
Query: 337 GVIMYEML 344
G I EM
Sbjct: 206 GCIFAEMF 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
Y+ + + H +HRD+KP NLL++ G IKL+DFGL RT
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
Y+ + + H +HRD+KP NLL++ G IKL+DFGL RT
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 288 YIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVF 322
Y APE+ L Y A D WSLG I EM+ +F
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 40 LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L E + ++ + + H +HRD+KP NLL++ G +KL+DFGL
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
+Y+I EF+ G ++ L + + + + A+ A + I + +IHRD++ N+L
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 76 LDARGHIKLSDFGLCTGLKKSHRT 99
+ A K++DFGL ++ + T
Sbjct: 317 VSASLVCKIADFGLARVIEDNEYT 340
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77 DARGHIKLSDFGL 89
A +KL DFGL
Sbjct: 145 SATDCVKLGDFGL 157
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQF--YIAETALAIDSIHKLGFIHRDIKPDNLL 75
+Y+I EF+ G ++ L + + + + A+ A + I + +IHRD++ N+L
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 310
Query: 76 LDARGHIKLSDFGLC 90
+ A K++DFGL
Sbjct: 311 VSASLVCKIADFGLA 325
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 320
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHR++ N L+ +K++DFGL
Sbjct: 321 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 361
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQF-YIAETALAIDSIHKLGFIHRDIKPDNLL 75
NL LIME+LP G + L + Y ++ ++ + +IHRD+ N+L
Sbjct: 90 NLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
++ +K+ DFGL L
Sbjct: 150 VENENRVKIGDFGLTKVL 167
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 290 APEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAADWWSL 336
APE ++ + A+D WS GV++YE+ +++ P A++ +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF----TYIEKSKSPPAEFMRM 230
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE ++ + A+D WS GV++YE+
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 161 VDGMLKLIDFGIANQMQ 177
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 161 VDGMLKLIDFGIANQMQ 177
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMK--KDTLSEECTQFY 48
+K+ A +K+++ + + L Y+I EF+ G+++ L + + ++ +
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + K FIHR++ N L+ +K++DFGL
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 403
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 77 DARGHIKLSDFGLCTGLKKS 96
A +KL DFGL ++ S
Sbjct: 525 SATDCVKLGDFGLSRYMEDS 544
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 87 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 145 VDGMLKLIDFGIANQMQ 161
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 142 VDGMLKLIDFGIANQMQ 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 146
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 147 SSNDCVKLGDFGL 159
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 83 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 140
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 141 VDGMLKLIDFGIANQMQ 157
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 147
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 148 SSNDCVKLGDFGL 160
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 149
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 150 SSNDCVKLGDFGL 162
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 172
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 173 SSNDCVKLGDFGL 185
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
+Y++ME D+ + L KK ++ + Y A+ +IH+ G +H D+KP N L+
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 78 ARGHIKLSDFGLCTGLK 94
G +KL DFG+ ++
Sbjct: 189 VDGMLKLIDFGIANQMQ 205
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 141
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 142 SSNDCVKLGDFGL 154
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI+E+ GG++ +L + + + +SE I + + +H+ +H D+KP N+L
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 76 LDA---RGHIKLSDFGL 89
L + G IK+ DFG+
Sbjct: 164 LSSIYPLGDIKIVDFGM 180
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 283 VGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
+GTP+Y+APE+ A D W++G+I Y +L F+
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
LY+++E + D L L+E + + + + +H G +HRD+KP N L++
Sbjct: 132 LYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190
Query: 78 ARGHIKLSDFGLC 90
+K+ DFGL
Sbjct: 191 QDCSVKVCDFGLA 203
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 273 KNRRALAYSTVGTPDYIAPE-VFLQTGYGPAADWWSLGVIMYEML--IAPEVFLQTGYGP 329
KN + V T Y APE + LQ Y A D WS+G I E+L I V GP
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGP 293
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 318 APE-VFLQTGYGPAADWWSLGVIMYEML-IVSRNIT 351
APE + LQ Y A D WS+G I E+L ++ N+
Sbjct: 251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 77 DARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 145 SSNDCVKLGDFGL 157
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 91 TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 151 VKTPQHVKITDFGLAKLL 168
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 38 DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDAR-GHIKLSDFGLCTG 92
++LS + + Y+ A+ IH+ G +HRD+KP N L + R L DFGL G
Sbjct: 112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQT-GYGPAADWWSLGVIMYEMLIAPEVFLQTGYGPAAD 332
+RR GTP + APEV + A D WS GVI +L F Y + D
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF----YKASDD 253
Query: 333 WWSLGVIM 340
+L IM
Sbjct: 254 LTALAQIM 261
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 18 LYLIMEFLPGGDMMTLL-MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
+++IME G++ + L ++K +L Y + + A+ + F+HRDI N+L+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 77 DARGHIKLSDFGLCTGLKKS 96
+ +KL DFGL ++ S
Sbjct: 525 SSNDCVKLGDFGLSRYMEDS 544
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDI 69
SD +L L+ ++P G ++ L D LS A I+ +H+ IHRDI
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI 159
Query: 70 KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
K N+LLD K+SDFGL +K +T
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQT 189
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 246 FEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAYSTV--GTPDYIAPEVFLQTG--YGP 301
F N FE L +D E +K N T GTP ++APEV T YGP
Sbjct: 201 FSTNKSFEIKL-----VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 302 AADWWSLGVIMYEMLIAPEVF 322
D WS GV+++ +L+ F
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPF 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARG--HIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSD 112
A+ +H G HRDIKP+N L IKL DFGL K + ++Y ++A
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 113 FSYPPFCSENPQETYRKVMSW 133
F P + + K +W
Sbjct: 240 FVAPEVLNTTNESYGPKCDAW 260
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 316 LIAPEVFLQTG--YGPAADWWSLGVIMYEMLI 345
+APEV T YGP D WS GV+++ +L+
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 40 LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
L E + ++ + + H +HRD+KP NLL++ G +KL++FGL
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDI 69
SD +L L+ ++P G ++ L D LS A I+ +H+ IHRDI
Sbjct: 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI 159
Query: 70 KPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
K N+LLD K+SDFGL +K +T
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQT 189
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ E L GG++ + + + +E AI +H + HRD+KP+NLL
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 76 LDAR---GHIKLSDFGL 89
++ +KL+DFG
Sbjct: 194 YTSKRPNAILKLTDFGF 210
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 285 TPDYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
TP Y+APEV Y + D WSLGVI Y +L
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILL 257
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV Y + D WSLGVI Y +L
Sbjct: 230 VAPEVLGPEKYDKSCDXWSLGVIXYILL 257
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 1 MKDYACLKQLRMSDPI-----------NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQF 47
+ + + + QLR S+ + LY++ E++ G ++ L + L +C
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + F+HRD+ N+L+ K+SDFGL
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 66 HRDIKPDNLLLDARGHIKLSDFG 88
HRD+KP N+L+D G +KLSDFG
Sbjct: 175 HRDVKPSNILMDKNGRVKLSDFG 197
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 284 GTPDYIAPEVFL-QTGY-GPAADWWSLGVIMYEML 316
GT +++ PE F ++ Y G D WSLG+ +Y M
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
+L+ME+ G L + K L E + +H IHRD+K N+LL
Sbjct: 130 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 189
Query: 79 RGHIKLSDFG 88
G +KL DFG
Sbjct: 190 PGLVKLGDFG 199
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEM 315
A A VGTP ++APEV L + Y D WSLG+ E+
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 154 VKTPQHVKITDFGLAKLL 171
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
+L+ME+ G L + K L E + +H IHRD+K N+LL
Sbjct: 91 WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 150
Query: 79 RGHIKLSDFG 88
G +KL DFG
Sbjct: 151 PGLVKLGDFG 160
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 277 ALAYSTVGTPDYIAPEVFL---QTGYGPAADWWSLGVIMYEM 315
A A VGTP ++APEV L + Y D WSLG+ E+
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDI 69
SD +L L+ ++P G ++ L D LS A I+ +H+ IHRDI
Sbjct: 94 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI 153
Query: 70 KPDNLLLDARGHIKLSDFGLCTGLKK 95
K N+LLD K+SDFGL +K
Sbjct: 154 KSANILLDEAFTAKISDFGLARASEK 179
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 150 VKTPQHVKITDFGLAKLL 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 91 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 150
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 151 VKTPQHVKITDFGLAKLL 168
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 97 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 157 VKTPQHVKITDFGLAKLL 174
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 152 VKTPQHVKITDFGLAKLL 169
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 79 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 138
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 139 LHEDLTVKIGDFGLAT 154
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 142 LHEDLTVKIGDFGLAT 157
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 93 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 153 VKTPQHVKITDFGLAKLL 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 104 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 163
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 164 LHEDLTVKIGDFGLAT 179
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 1 MKDYACLKQLRMSDPI-----------NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQF 47
+ + + + QLR S+ + LY++ E++ G ++ L + L +C
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + F+HRD+ N+L+ K+SDFGL
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 137 LHEDLTVKIGDFGLAT 152
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 165 LHEDLTVKIGDFGLAT 180
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 137 LHEDLTVKIGDFGLAT 152
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 142 LHEDLTVKIGDFGLAT 157
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 97 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 156
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 157 LHEDLTVKIGDFGLAT 172
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 137 LHEDLTVKIGDFGLAT 152
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLL 75
L ++ ++ G + L +T E IA +TA +D +H IHRD+K +N+
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 76 LDARGHIKLSDFGLCT 91
L +K+ DFGL T
Sbjct: 165 LHEDLTVKIGDFGLAT 180
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 1 MKDYACLKQLRMSDPI-----------NLYLIMEFLPGGDMMTLLMKK--DTLSEECTQF 47
+ + + + QLR S+ + LY++ E++ G ++ L + L +C
Sbjct: 53 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 112
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + F+HRD+ N+L+ K+SDFGL
Sbjct: 113 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 1 MKDYACLKQLRMSDPINL-----------YLIMEFLPGGDMMTLLMKK--DTLSEECTQF 47
+ + + + QLR S+ + L Y++ E++ G ++ L + L +C
Sbjct: 47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 48 YIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
+ + A++ + F+HRD+ N+L+ K+SDFGL
Sbjct: 107 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 13 SDPINLYLIMEFLPGGDMMTLLMKKDTL-----SEECTQFYIAETAL-AIDSIHKLGFIH 66
SD +L L+ + P G ++ L D C IA+ A I+ +H+ IH
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK---IAQGAANGINFLHENHHIH 147
Query: 67 RDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
RDIK N+LLD K+SDFGL +K
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLARASEK 176
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 143
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQN 168
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 274 NRRALAYSTVGTPDYIAPEVFLQTGY-GPAADWWSLGVIMYEMLIAPEVFLQ 324
R L Y+ GT +Y APEV + Y GP + WSLGV +Y ++ F +
Sbjct: 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 20 LIMEFLPGG-DMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
L+ME G D+ + + L E + + A+ + IHRDIK +N+++
Sbjct: 106 LVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE 165
Query: 79 RGHIKLSDFGLCTGLKKS 96
IKL DFG L++
Sbjct: 166 DFTIKLIDFGSAAYLERG 183
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 309 GVIMYEMLIAPEVFLQTGY-GPAADWWSLGVIMYEML 344
G I Y APEV + Y GP + WSLGV +Y ++
Sbjct: 191 GTIEY---CAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 149
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQN 174
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 149
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQN 174
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 143
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQN 168
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 139
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 139
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+ ++ E P G ++ L K TLS Y + A + + FIHRD+
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-----YAVQVAEGMGYLESKRFIHRDLAA 139
Query: 72 DNLLLDARGHIKLSDFGLCTGLKKS 96
NLLL R +K+ DFGL L ++
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQN 164
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 19 YLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
++IME P G++ L + K++L Y + A+ + + +HRDI N+L+
Sbjct: 100 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 159
Query: 78 ARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 160 SPECVKLGDFGL 171
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 94 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 153
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 154 VKTPQHVKITDFG 166
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 20/111 (18%)
Query: 18 LYLIMEFLPGGDMMTLL------------MKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
L +I+EF G++ T L + KD L+ E Y + A ++ + I
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 166
Query: 66 HRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
HRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLA--------RDIYKDPDYVRKGDARLP 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ L+ + +P G ++ + + KD + + + + A + + + +HRD+ N+L
Sbjct: 90 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGLCTGLKKSHR 98
+ + H+K++DFGL L+ +
Sbjct: 150 VKSPNHVKITDFGLARLLEGDEK 172
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LIM+ +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 92 TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 19 YLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
++IME P G++ L + K++L Y + A+ + + +HRDI N+L+
Sbjct: 84 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 143
Query: 78 ARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 144 SPECVKLGDFGL 155
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ L+ + +P G ++ + + KD + + + + A + + + +HRD+ N+L
Sbjct: 113 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVL 172
Query: 76 LDARGHIKLSDFGLC 90
+ + H+K++DFGL
Sbjct: 173 VKSPNHVKITDFGLA 187
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 19 YLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
++IME P G++ L + K++L Y + A+ + + +HRDI N+L+
Sbjct: 88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 147
Query: 78 ARGHIKLSDFGL 89
+ +KL DFGL
Sbjct: 148 SPECVKLGDFGL 159
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 150 VKTPQHVKITDFGLAKLL 167
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +GF+HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGFVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 20/111 (18%)
Query: 18 LYLIMEFLPGGDMMTLL------------MKKDTLSEECTQFYIAETALAIDSIHKLGFI 65
L +I+EF G++ T L + KD L+ E Y + A ++ + I
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXI 166
Query: 66 HRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
HRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+Y+I EF+ G ++ L + L + F A+ A + I + +IHRD++ N+
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAEGMAYIERKNYIHRDLRAANV 140
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRT 99
L+ K++DFGL ++ + T
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYT 165
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLC 90
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L+++ F+ G L+ D ++E + + A+D IH +G++HR +K ++L
Sbjct: 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL 160
Query: 76 LDARGHIKLSDF 87
+ G + LS
Sbjct: 161 ISVDGKVYLSGL 172
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 110
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKK--DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
L+++ F+ G L+ D ++E + + A+D IH +G++HR +K ++L
Sbjct: 85 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL 144
Query: 76 LDARGHIKLSDF 87
+ G + LS
Sbjct: 145 ISVDGKVYLSGL 156
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 36 KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFG----LCT 91
K + L+E+ + + +++IH G+ HRD+KP N+LL G L D G C
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186
Query: 92 GLKKSHRTDFYRD-------LSQAKPSDFSYPPFC 119
++ S + +D +S P FS C
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 74 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT 165
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 78 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 132
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 133 RNCLVNDQGVVKVSDFGL 150
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 82 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 83 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 174
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 124 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 183
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 184 VKTPQHVKITDFGLAKLL 201
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
+Y++ E++ G ++ L + + + A+ A + I ++ +IHRD++ N+L
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 137
Query: 76 LDARGHIKLSDFGLCTGLKKSHRT 99
+ K++DFGL ++ + T
Sbjct: 138 VGNGLICKIADFGLARLIEDNEXT 161
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 100 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 159
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 160 VKTPQHVKITDFGLAKLL 177
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 74 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 128
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 129 RNCLVNDQGVVKVSDFGL 146
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 150 VKTPQHVKITDFGLAKLL 167
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 80 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 171
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 148
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 149 RNCLVNDQGVVKVSDFGL 166
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 133
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 134 RNCLVNDQGVVKVSDFGL 151
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 133
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 134 RNCLVNDQGVVKVSDFGL 151
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 20 LIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L+
Sbjct: 118 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 177
Query: 79 RGHIKLSDFGLCTGL 93
H+K++DFGL L
Sbjct: 178 PQHVKITDFGLAKLL 192
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 74 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 157 VKTPQHVKITDFGLAKLL 174
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 76 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 167
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 85 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-----KDVCEAMEYLESKQFLHRDLAA 139
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 140 RNCLVNDQGVVKVSDFGL 157
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+++I E++ G ++ L + L E C + A++ + F+HRD+
Sbjct: 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----DVCEAMEYLESKQFLHRDLAA 148
Query: 72 DNLLLDARGHIKLSDFGL 89
N L++ +G +K+SDFGL
Sbjct: 149 RNCLVNDQGVVKVSDFGL 166
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY +++E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 170
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 150 VKTPQHVKITDFGLAKLL 167
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++Y++ E++ D+ +L ++ L EE + ++ + + IH +HRD+KP NL +
Sbjct: 96 SVYIVQEYMET-DLANVL-EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI 153
Query: 77 DARGHI-KLSDFGLC 90
+ + K+ DFGL
Sbjct: 154 NTEDLVLKIGDFGLA 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 152 VKTPQHVKITDFGLAKLL 169
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 157 VKTPQHVKITDFGLAKLL 174
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIKPD 72
++ E++ G + T L D QF I + + + LG++HRD+
Sbjct: 127 IVTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 73 NLLLDARGHIKLSDFGLCTGLK 94
N+L+D+ K+SDFGL L+
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLE 202
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 279 AYSTVGTP---DYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPE 320
AY+T G + APE + A+D WS GV+M+E+L E
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + A+D WS GV+M+E+L
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 153 VKTPQHVKITDFGLAKLL 170
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 75 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 166
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ME++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 153 VKTPQHVKITDFGLAKLL 170
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIKPD 72
++ E++ G + T L D QF I + + + LG++HRD+
Sbjct: 127 IVTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR 180
Query: 73 NLLLDARGHIKLSDFGLCTGLK 94
N+L+D+ K+SDFGL L+
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLE 202
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPE 320
+ APE + A+D WS GV+M+E+L E
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APE + A+D WS GV+M+E+L
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 20 LIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDA 78
LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L+
Sbjct: 87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 146
Query: 79 RGHIKLSDFGLCTGL 93
H+K++DFGL L
Sbjct: 147 PQHVKITDFGLAKLL 161
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 74 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFGL 89
+ H+K++DFGL
Sbjct: 150 VKTPQHVKITDFGL 163
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 113
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 114 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 163
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 96 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 155
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 156 VKTPQHVKITDFGLAKLL 173
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 93 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 152
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 153 VKTPQHVKITDFGLAKLL 170
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + T L K D QF + + + + + +G++HRD+
Sbjct: 98 VMIVTEYMENGSLDTFLKKNDG------QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLA 151
Query: 71 PDNLLLDARGHIKLSDFGLCTGLK 94
N+L+++ K+SDFGL L+
Sbjct: 152 ARNILINSNLVCKVSDFGLSRVLE 175
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 20 LIMEFLPGG--DMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLL- 75
++ME L D+ +K +L T +A+ ++ I+ IH FIHRD+KPDN L
Sbjct: 82 MVMELLGPSLEDLFNFCSRKFSLK---TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 76 -LDARGH-IKLSDFGLCTGLK--KSHRTDFYRD 104
L +G+ + + DFGL + ++H+ YR+
Sbjct: 139 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRE 171
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 92 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 145
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 146 ARNILINSNLVCKVSDFGL 164
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 28/98 (28%)
Query: 16 INLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETA--------------LAIDSIH- 60
I L ++ME++P DTL C +Y + A +I +H
Sbjct: 99 IYLNVVMEYVP-----------DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 61 -KLGFIHRDIKPDNLLLD-ARGHIKLSDFGLCTGLKKS 96
+ HRDIKP N+L++ A G +KL DFG L S
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 288 YIAPE-VFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y APE +F Y A D WS+G I EM++ +F
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD---TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
+Y+I E++ G ++ L + L + F A+ A + I + +IHRD++ N+
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAEGMAYIERKNYIHRDLRAANV 141
Query: 75 LLDARGHIKLSDFGLCTGLKKSHRT 99
L+ K++DFGL ++ + T
Sbjct: 142 LVSESLMCKIADFGLARVIEDNEYT 166
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 79 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY +++E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 20 LIMEFLPGG--DMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLL- 75
++ME L D+ +K +L T +A+ ++ I+ IH FIHRD+KPDN L
Sbjct: 82 MVMELLGPSLEDLFNFCSRKFSLK---TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 76 -LDARGH-IKLSDFGLCTGLK--KSHRTDFYRD 104
L +G+ + + DFGL + ++H+ YR+
Sbjct: 139 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRE 171
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 80 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 109 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 162
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 163 ARNILINSNLVCKVSDFGL 181
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 87 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVL 146
Query: 76 LDARGHIKLSDFGLCTGL 93
+ H+K++DFGL L
Sbjct: 147 VKTPQHVKITDFGLAKLL 164
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 74 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLYLIM---------EFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 84 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ V T Y APEV L+ G+ D WS+G I++E + +F
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF 253
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEMLI 345
APEV L+ G+ D WS+G I++E +
Sbjct: 221 APEVILELGWSQPCDVWSIGCIIFEYYV 248
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGLCTGLK 94
N+L+++ K+SDFGL L+
Sbjct: 175 ARNILINSNLVCKVSDFGLARVLE 198
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 20 LIMEFLPGG--DMMTLLMKKDTLSEECTQFYIAETALA-IDSIHKLGFIHRDIKPDNLL- 75
++ME L D+ +K +L T +A+ ++ I+ IH FIHRD+KPDN L
Sbjct: 80 MVMELLGPSLEDLFNFCSRKFSLK---TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 136
Query: 76 -LDARGH-IKLSDFGLCTGLK--KSHRTDFYRD 104
L +G+ + + DFGL + ++H+ YR+
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRE 169
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ +++EF+ G + L K D QF + + A + + +G++HRD+
Sbjct: 119 VMIVIEFMENGALDAFLRKHDG------QFTVIQLVGMLRGIAAGMRYLADMGYVHRDLA 172
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 173 ARNILVNSNLVCKVSDFGL 191
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 279 AYSTVGTP---DYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
Y+T G + APE + A+D WS G++M+E++
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 119 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 172
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 173 ARNILINSNLVCKVSDFGL 191
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 69 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHRD++ N+L+ K++DFGL ++ + T
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
L VGT Y+APE+ Q Y D+WS G + +E + FL
Sbjct: 180 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L ME+ GGD+ L + + L E + +++ + A+ +H+ IHRD+KP+N++L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Query: 298 GYGPAADWWSL-----GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
GY D L G + Y +APE+ Q Y D+WS G + +E +
Sbjct: 170 GYAKELDQGELCTEFVGTLQY---LAPELLEQKKYTVTVDYWSFGTLAFECI 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 278 LAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
L VGT Y+APE+ Q Y D+WS G + +E + FL
Sbjct: 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 20 LIMEFLPGGDMMTLLMKKDT---LSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L ME+ GGD+ L + + L E + +++ + A+ +H+ IHRD+KP+N++L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 8/52 (15%)
Query: 298 GYGPAADWWSL-----GVIMYEMLIAPEVFLQTGYGPAADWWSLGVIMYEML 344
GY D L G + Y +APE+ Q Y D+WS G + +E +
Sbjct: 169 GYAKELDQGELCTEFVGTLQY---LAPELLEQKKYTVTVDYWSFGTLAFECI 217
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E++ G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDXVRKGDARLP 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 157
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 287
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 288 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 327
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARG-------------HIKLSDFGLCTGLKK 95
+ + A + +H L IHRD+KP N+L+ I +SDFGLC L
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL-D 179
Query: 96 SHRTDFYRDLSQ-AKPSDFSYPPFCSE-NPQETYRKV 130
S ++ F +L+ + S + P E N +T R++
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL 216
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 50 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 109
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 110 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 159
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 52 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 111
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 161
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 18 LYLIMEFLPGGDMMTLL--------------MKKDTLSEECTQFYIAETALAIDSIHKLG 63
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 168
Query: 64 FIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
IHRD+ N+LL + +K+ DFGL + K
Sbjct: 169 XIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 17 NLYLIMEFLPG--GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
++YL+ +F +++ ++ K TLSE + L IH+ +HRD+K N+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY--IHRNKILHRDMKAANV 156
Query: 75 LLDARGHIKLSDFGLC 90
L+ G +KL+DFGL
Sbjct: 157 LITRDGVLKLADFGLA 172
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 267 RAESWKKNRRALAY-STVGTPDYIAPEVFL-QTGYGPAADWWSLGVIMYEM 315
RA S KN + Y + V T Y PE+ L + YGP D W G IM EM
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 250
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD++ N+L+ K++DFGL ++ + T
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 17 NLYLIMEFLPG--GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
++YL+ +F +++ ++ K TLSE + L IH+ +HRD+K N+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY--IHRNKILHRDMKAANV 156
Query: 75 LLDARGHIKLSDFGL 89
L+ G +KL+DFGL
Sbjct: 157 LITRDGVLKLADFGL 171
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 229 GEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAY-STVGTPD 287
+I+++D N R +F L+ RA S KN + Y + V T
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLA---------RAFSLAKNSQPNRYXNRVVTLW 194
Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEM 315
Y PE+ L + YGP D W G IM EM
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 17 NLYLIMEFLPG--GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
++YL+ +F +++ ++ K TLSE + L IH+ +HRD+K N+
Sbjct: 98 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY--IHRNKILHRDMKAANV 155
Query: 75 LLDARGHIKLSDFGL 89
L+ G +KL+DFGL
Sbjct: 156 LITRDGVLKLADFGL 170
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 229 GEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAY-STVGTPD 287
+I+++D N R +F L+ RA S KN + Y + V T
Sbjct: 143 NKILHRDMKAANVLITRDGVLKLADFGLA---------RAFSLAKNSQPNRYXNRVVTLW 193
Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEM 315
Y PE+ L + YGP D W G IM EM
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 17 NLYLIMEFLPG--GDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNL 74
++YL+ +F +++ ++ K TLSE + L IH+ +HRD+K N+
Sbjct: 99 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY--IHRNKILHRDMKAANV 156
Query: 75 LLDARGHIKLSDFGL 89
L+ G +KL+DFGL
Sbjct: 157 LITRDGVLKLADFGL 171
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 229 GEIIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAESWKKNRRALAY-STVGTPD 287
+I+++D N R +F L+ RA S KN + Y + V T
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLA---------RAFSLAKNSQPNRYXNRVVTLW 194
Query: 288 YIAPEVFL-QTGYGPAADWWSLGVIMYEM 315
Y PE+ L + YGP D W G IM EM
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAI-DSIH-------KLGF------I 65
+I E+ GD++ L +K + E F IA + L+ D +H + F I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 66 HRDIKPDNLLLDARGHI-KLSDFGL 89
HRD+ N+LL GH+ K+ DFGL
Sbjct: 187 HRDVAARNVLL-TNGHVAKIGDFGL 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 92 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 152 VKTPQHVKITDFG 164
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
Y+ + + Y APEV L YG D WSLG I+ E+L
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGH--IKLSDFG 88
+D++HK IH D+KP+N+LL +G IK+ DFG
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L YG D WSLG I+ E+L
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELL 293
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFSYP 116
IHRD+ N+LL + +K+ DFGL D Y+D + D P
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLA--------RDIYKDPDYVRKGDARLP 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 149
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 150 VKTPQHVKITDFG 162
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
Y+ + + Y APEV L YG D WSLG I+ E+L
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGH--IKLSDFG 88
+D++HK IH D+KP+N+LL +G IK+ DFG
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L YG D WSLG I+ E+L
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELL 293
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ LI + +P G ++ + + KD + + + + A ++ + +HRD+ N+L
Sbjct: 97 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL 156
Query: 76 LDARGHIKLSDFG 88
+ H+K++DFG
Sbjct: 157 VKTPQHVKITDFG 169
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 132 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 186
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 164 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 218
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 136 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 190
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 133 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 187
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARG-------------HIKLSDFGLCTGL 93
+ + A + +H L IHRD+KP N+L+ I +SDFGLC L
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARG-------------HIKLSDFGLCTGL 93
+ + A + +H L IHRD+KP N+L+ I +SDFGLC L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHKLGFIHRDIKPDNLL 75
+Y++ E++ G ++ L + Q A+ A + + ++ ++HRD++ N+L
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 76 LDARGHIKLSDFGLCTGLKKSHRT 99
+ K++DFGL ++ + T
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYT 170
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARG-------------HIKLSDFGLCTGL 93
+ + A + +H L IHRD+KP N+L+ I +SDFGLC L
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 135 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 189
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
S + T Y APEV L G+ ++D WS G ++ E+ +F
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 43 ECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLD 77
E + Y E A++ + K+ H D+KP+N+LLD
Sbjct: 137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
APEV L G+ ++D WS G ++ E+
Sbjct: 227 APEVILNLGWDVSSDMWSFGCVLAEL 252
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 18 LYLIMEFLPGGDMMTLL---------------MKKDTLSEECTQFYIAETALAIDSIHKL 62
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 63 GFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
IHRD+ N+LL + +K+ DFGL + K
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
IHRD+ N+LL + +K+ DFGL + K
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 135 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 189
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E + G + + L K D QF + + A + + +G++HRD+
Sbjct: 92 VMIVTEXMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 145
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 146 ARNILINSNLVCKVSDFGL 164
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 129 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 183
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 142 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 196
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 55 AIDSIHKLGFIHRDIKPDNLLLDARGH--IKLSDFG 88
+D++HK IH D+KP+N+LL +G IK+ DFG
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 279 AYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
Y + + Y APEV L YG D WSLG I+ E+L
Sbjct: 256 VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEML 344
APEV L YG D WSLG I+ E+L
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELL 293
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I+EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
IHRD+ N+LL + +K+ DFGL + K
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 142 QM--AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI---YETDYYRK 196
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ V T Y APEV L G+ D WS+G I+ E + VF
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYE 342
APEV L G+ D WS+G I+ E
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIE 226
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
+++ME + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 200
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSE-----------ECT 45
MK + C +R+ ++ ++ME + GD+ + L +E E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
Q AE A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 134 QM-AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI---YETDYYR 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 25 LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL 84
L G D+ T+ M + E C A + +H IHRD+K N+LLD K+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIG-----AARGLHYLHTRAIIHRDVKSINILLDENFVPKI 180
Query: 85 SDFGLC---TGLKKSH 97
+DFG+ T L ++H
Sbjct: 181 TDFGISKKGTELDQTH 196
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
GT YI PE F++ +D +S GV+++E+L A +Q+
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 4 YACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFY--IAETALAIDSIHK 61
YA + Q +PI Y+I E++ G ++ L + + A+ A + I +
Sbjct: 70 YAVVTQ----EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
+IHR+++ N+L+ K++DFGL ++ + T
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA-ETALAIDSIHKLGFIHRDIKPDNLLL 76
L I E++ GG + ++ D+ + A + A + +H + IHRD+ N L+
Sbjct: 82 LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141
Query: 77 DARGHIKLSDFGL 89
++ ++DFGL
Sbjct: 142 RENKNVVVADFGL 154
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 231 IIYKDWVFINYTFKRFEANSPFEFSLSSTNPMDSKRRAE---SWKKNRRALAYSTVGTPD 287
II++D N + + +F L+ +D K + E S KK R Y+ VG P
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLM-VDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEML 316
++APE+ Y D +S G+++ E++
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
+++ME + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 124 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 215
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 25 LPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKL 84
L G D+ T+ M + E C A + +H IHRD+K N+LLD K+
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIG-----AARGLHYLHTRAIIHRDVKSINILLDENFVPKI 180
Query: 85 SDFGLC---TGLKKSH 97
+DFG+ T L ++H
Sbjct: 181 TDFGISKKGTELGQTH 196
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 284 GTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFLQT 325
GT YI PE F++ +D +S GV+++E+L A +Q+
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 3 DYACLKQLRMSDPINLYLIMEFLPGGDMMTLLMKK----DTLSEECTQFYIAETALAIDS 58
+ L+ + + +P NL L+MEF GG + +L K D L Q L ++
Sbjct: 67 NIIALRGVCLKEP-NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 59 IHKLGFIHRDIKPDNLLLDARGH--------IKLSDFGLCTGLKKSHRT 99
I + IHRD+K N+L+ + +K++DFGL ++ HRT
Sbjct: 126 I--VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA---REWHRT 169
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 275 RRALAYSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF-----LQTGYGP 329
R S G ++APEV + + +D WS GV+++E+L F L YG
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 330 AAD 332
A +
Sbjct: 227 AMN 229
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 317 IAPEVFLQTGYGPAADWWSLGVIMYEML 344
+APEV + + +D WS GV+++E+L
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELL 208
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRT 99
A+ A + + ++ ++HRD+ N+L+ K++DFGL ++ + T
Sbjct: 121 AQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 20 LIMEFLPGGDMMTLLMKK------DTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
+I+ F+ GD+ T L+ + + ++ + AL ++ + F+HRD+ N
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
+L + ++DFGL KK + D+YR AK
Sbjct: 178 CMLRDDMTVCVADFGLS---KKIYSGDYYRQGRIAK 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 1 MKDYACLKQLRMSDPINLY---------LIMEFLPGGDMMTLLMKKDTLSEECTQFY--I 49
+++ +K+LR + LY ++ E++ G ++ L + Q
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMA 120
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGL 89
A+ A + + ++ ++HRD++ N+L+ K++DFGL
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E + G + + L K D QF + + A + + +G++HRD+
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 20 LIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-TALAIDSIH-------KLGF------I 65
+I E+ GD++ L +K + E F IA TA D +H + F I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 66 HRDIKPDNLLLDARGHI-KLSDFGL 89
HRD+ N+LL GH+ K+ DFGL
Sbjct: 187 HRDVAARNVLL-TNGHVAKIGDFGL 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 18 LYLIMEFLPGGDMMTLL----------------MKKDTLSEECTQFYIAETALAIDSIHK 61
L +I EF G++ T L + KD L+ E Y + A ++ +
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKK 95
IHRD+ N+LL + +K+ DFGL + K
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 20 LIMEFLPGGDMMTLLMKKD------TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
+I+ F+ GD+ L+ L + ++ + A ++ + FIHRD+ N
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167
Query: 74 LLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
+L + ++DFGL +K + D+YR +K
Sbjct: 168 CMLAEDMTVCVADFGLS---RKIYSGDYYRQGCASK 200
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSE-----------ECT 45
MK + C +R+ ++ ++ME + GD+ + L +E E
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
Q AE A + ++ F+HRD+ N ++ +K+ DFG+ + + TD+YR
Sbjct: 133 QM-AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI---YETDYYR 186
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
KD L+ E Y + A ++ + IHRD+ N+LL + +K+ DFGL
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 240
Query: 97 HRTDFYRDLSQAKPSDFSYP 116
D Y+D + D P
Sbjct: 241 --RDIYKDPDYVRKGDARLP 258
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ +I EF+ G + + L + D QF + + A + + + ++HRD+
Sbjct: 109 VMIITEFMENGSLDSFLRQNDG------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 162
Query: 71 PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK-------PSDFSYPPFCSENP 123
N+L+++ K+SDFGL L+ Y K P Y F S +
Sbjct: 163 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 124 QETYRKVM 131
+Y VM
Sbjct: 223 VWSYGIVM 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
KD L+ E Y + A ++ + IHRD+ N+LL + +K+ DFGL
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 238
Query: 97 HRTDFYRDLSQAKPSDFSYP 116
D Y+D + D P
Sbjct: 239 --RDIYKDPDYVRKGDARLP 256
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
KD L+ E Y + A ++ + IHRD+ N+LL + +K+ DFGL
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 245
Query: 97 HRTDFYRDLSQAKPSDFSYP 116
D Y+D + D P
Sbjct: 246 --RDIYKDPDYVRKGDARLP 263
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 37 KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
KD L+ E Y + A ++ + IHRD+ N+LL + +K+ DFGL
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 247
Query: 97 HRTDFYRDLSQAKPSDFSYP 116
D Y+D + D P
Sbjct: 248 --RDIYKDPDYVRKGDARLP 265
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+ L+ + +P G ++ + + + L + + + A + + + +HRD+ N+L
Sbjct: 92 TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVL 151
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
+ + H+K++DFGL L T+++ D
Sbjct: 152 VKSPNHVKITDFGLAR-LLDIDETEYHAD 179
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD-TLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
L +I EF+ G D+ + L+E Y+ + A+ +H H DI+P+N++
Sbjct: 76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY 135
Query: 77 DAR--GHIKLSDFGLCTGLK 94
R IK+ +FG LK
Sbjct: 136 QTRRSSTIKIIEFGQARQLK 155
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 286 PDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVFL 323
P+Y APEV A D WSLG ++Y +L FL
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 25/179 (13%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLL------------MKKDTLSEEC 44
MK++ C +R+ ++ +IME + GD+ + L + +LS+
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 45 TQFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
E A + ++ F+HRD+ N + +K+ DFG+ + + TD+YR
Sbjct: 129 QM--AGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI---YETDYYRK 183
Query: 105 LSQA-KPSDFSYPPFCSENPQETYRKVMSWRDTL---VFPPEVPISEEARETIVRFCSE 159
+ P + P + TY V S+ L E P + E ++RF E
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 1 MKDYACLKQLRMSDPINL----------YLIMEFLPGGDMMTLLMKKDTLSEECTQFYIA 50
+++ + LK+L+ + I L +LI E+ D+ + K +S + ++
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLY 139
Query: 51 ETALAIDSIHKLGFIHRDIKPDNLLLDARGH-----IKLSDFGLC 90
+ ++ H +HRD+KP NLLL +K+ DFGL
Sbjct: 140 QLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDI---YRASYYR 201
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 56 IDSIHKLGFIHRDIKPDNLLLD---ARGHIKLSDFGLC 90
++ +H F+HRDIKPDN L+ + + DFGL
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 18 LYLIMEFLPGGDMMTLL------MKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKP 71
+Y++ E++ G ++ L ++ L E C Y +A H+ FIHRD+
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC---YDVCEGMAFLESHQ--FIHRDLAA 132
Query: 72 DNLLLDARGHIKLSDFGL 89
N L+D +K+SDFG+
Sbjct: 133 RNCLVDRDLCVKVSDFGM 150
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 281 STVGTP---DYIAPEVFLQTGYGPAADWWSLGVIMYEML 316
S+VGT + APEVF Y +D W+ G++M+E+
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEMLIVSR 348
APEVF Y +D W+ G++M+E+ + +
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYE 314
+ V T Y PEV L+ G+ D WS+G I++E
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 319 PEVFLQTGYGPAADWWSLGVIMYE 342
PEV L+ G+ D WS+G I++E
Sbjct: 217 PEVILELGWAQPCDVWSIGCILFE 240
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYE 314
+ V T Y PEV L+ G+ D WS+G I++E
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 319 PEVFLQTGYGPAADWWSLGVIMYE 342
PEV L+ G+ D WS+G I++E
Sbjct: 208 PEVILELGWAQPCDVWSIGCILFE 231
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGF 64
+++ + + ++ EF+ G + + L D QF + + A + + ++ +
Sbjct: 84 VTNSMPVMILTEFMENGALDSFLRLNDG------QFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 65 IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK-------PSDFSYPP 117
+HRD+ N+L+++ K+SDFGL L+++ Y K P ++
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 118 FCSENPQETYRKVM 131
F S + +Y VM
Sbjct: 198 FTSASDAWSYGIVM 211
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 109 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 200
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L L+ ++LP G ++ + + + L + + + A + + + G +HR++ N+L
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 165
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
L + ++++DFG+ L + Y +
Sbjct: 166 LKSPSQVQVADFGVADLLPPDDKQLLYSE 194
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 201
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 101 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 160
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 161 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 192
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSE-----------ECT 45
MK + C +R+ ++ ++ME + GD+ + L +E E
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
Q AE A + ++ F+HR++ N ++ +K+ DFG+ + + TD+YR
Sbjct: 135 QM-AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT---RDIYETDYYR 188
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYE 314
+ V T Y PEV L+ G+ D WS+G I++E
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 319 PEVFLQTGYGPAADWWSLGVIMYE 342
PEV L+ G+ D WS+G I++E
Sbjct: 240 PEVILELGWAQPCDVWSIGCILFE 263
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 185
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 186 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 217
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSE-----------ECT 45
MK + C +R+ ++ ++ME + GD+ + L +E E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
Q AE A + ++ F+HR++ N ++ +K+ DFG+ + + TD+YR
Sbjct: 134 QM-AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI---YETDYYR 187
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 175
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 176 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYR 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 17 NLYLIMEFLPGGDMMTLLMK-KDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLL 75
+L L+ ++LP G ++ + + + L + + + A + + + G +HR++ N+L
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL 147
Query: 76 LDARGHIKLSDFGLCTGLKKSHRTDFYRD 104
L + ++++DFG+ L + Y +
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDKQLLYSE 176
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 195
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 196 RNCLLTCPGPGRVAKIGDFGMARDI---YRASYYR 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 13 SDPINLYLIMEFLPGGDMM---------TLLMKKDTLSEECTQ---FYIAE-TALAIDSI 59
DP L ++ E++ GD+ +LM + E TQ +IA+ A + +
Sbjct: 87 GDP--LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL 144
Query: 60 HKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
F+HRD+ N L+ +K+ DFG+ + + TD+YR
Sbjct: 145 ASQHFVHRDLATRNCLVGENLLVKIGDFGMS---RDVYSTDYYR 185
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y + + Y +PEV L Y A D WSLG I+ EM +F
Sbjct: 197 YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLL--DARGHIKLSDFG----LCTGLKKSHRTDFYR 103
TAL + +L IH D+KP+N+LL R IK+ DFG L + + ++ FYR
Sbjct: 149 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYR 206
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
+PEV L Y A D WSLG I+ EM
Sbjct: 207 SPEVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 186
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYR 218
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 19 YLIMEFLPGGDMMTLLMKKDTLSEECTQF------YIA-ETALAIDSIHKLGFIHRDIKP 71
++++E + GGD+ + L + + + ++A + A + + FIHRDI
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209
Query: 72 DNLLLDARGH---IKLSDFGLCTGLKKSHRTDFYR 103
N LL G K+ DFG+ + +R +YR
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYR 241
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y + + Y +PEV L Y A D WSLG I+ EM +F
Sbjct: 216 YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLL--DARGHIKLSDFG----LCTGLKKSHRTDFYR 103
TAL + +L IH D+KP+N+LL R IK+ DFG L + + ++ FYR
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYR 225
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
+PEV L Y A D WSLG I+ EM
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 YSTVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
Y + + Y +PEV L Y A D WSLG I+ EM +F
Sbjct: 216 YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 52 TALAIDSIHKLGFIHRDIKPDNLLL--DARGHIKLSDFG----LCTGLKKSHRTDFYR 103
TAL + +L IH D+KP+N+LL R IK+ DFG L + + ++ FYR
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYR 225
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYEM 343
+PEV L Y A D WSLG I+ EM
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 1 MKDYACLKQLRMSDPINLY----LIMEFLPGGDMMTLLMKKDT-LSEECTQFYIAETALA 55
M ++ +R+ I+ Y +I E++ G + L +KD S + A
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 56 IDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQ-----AKP 110
+ + + ++HRD+ N+L+++ K+SDFGL L+ + + P
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 111 SDFSYPPFCSENPQETYRKVM 131
SY F S + ++ VM
Sbjct: 220 EAISYRKFTSASDVWSFGIVM 240
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 288 YIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPE 320
+ APE + A+D WS G++M+E++ E
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ ++ E + G + + L K D QF + + A + + +G +HRD+
Sbjct: 121 VMIVTEXMENGSLDSFLRKHDA------QFTVIQLVGMLRGIASGMKYLSDMGAVHRDLA 174
Query: 71 PDNLLLDARGHIKLSDFGL 89
N+L+++ K+SDFGL
Sbjct: 175 ARNILINSNLVCKVSDFGL 193
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 17 NLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
LY+ + G D+ L ++ L+ + + A+D+ H G HRD+KP+N+L+
Sbjct: 108 QLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV 167
Query: 77 DARGHIKLSDFGLCT 91
A L DFG+ +
Sbjct: 168 SADDFAYLVDFGIAS 182
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIA 318
+TVGT Y APE F ++ AD ++L ++YE L
Sbjct: 194 NTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 19 YLIMEFLPGGDMMTLLM--KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDNLLL 76
++++ ++ GD++ + +++ ++ F + + A ++ + + F+HRD+ N +L
Sbjct: 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARGMEYLAEQKFVHRDLAARNCML 157
Query: 77 DARGHIKLSDFGLC 90
D +K++DFGL
Sbjct: 158 DESFTVKVADFGLA 171
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 49 IAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
IA + + S H F+HRD+ N L+ A +K+ DFG+ + + TD+YR
Sbjct: 142 IASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMS---RDVYSTDYYR 190
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 12 MSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGF 64
+++ + + ++ EF+ G + + L D QF + + A + + ++ +
Sbjct: 86 VTNSMPVMILTEFMENGALDSFLRLNDG------QFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 65 IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKS 96
+HRD+ N+L+++ K+SDFGL L+++
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 171
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+ V Y APEV L G+ D WS+G I+ E + VF
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 318 APEVFLQTGYGPAADWWSLGVIMYE 342
APEV L G+ D WS+G I+ E
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIE 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 1 MKDYACLKQLRMSDPIN----LYLIMEFLPGGDMMTLLMKKDTLSE-----------ECT 45
MK + C +R+ ++ ++ME + GD+ + L +E E
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 46 QFYIAETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
Q AE A + ++ F+HRD+ N ++ +K+ DFG+ + + T +YR
Sbjct: 134 QM-AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI---YETAYYR 187
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETA----LAIDSIHK- 61
L P ++++M F G+ + L+KK Y+ + + L +D +H+
Sbjct: 92 LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRR 150
Query: 62 LGFIHRDIKPDNLLLDARG------HIKLSDFG 88
G IH DIKP+N+L++ IK++D G
Sbjct: 151 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+++ T +Y +PEV L +G AD WS +++E++ +F
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 7 LKQLRMSDPINLYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAETA----LAIDSIHK- 61
L P ++++M F G+ + L+KK Y+ + + L +D +H+
Sbjct: 92 LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRR 150
Query: 62 LGFIHRDIKPDNLLLDARG------HIKLSDFG 88
G IH DIKP+N+L++ IK++D G
Sbjct: 151 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 281 STVGTPDYIAPEVFLQTGYGPAADWWSLGVIMYEMLIAPEVF 322
+++ T +Y +PEV L +G AD WS +++E++ +F
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 18 LYLIMEFLPGGDMMTLLMKKDTLSEECTQFYIAE-------TALAIDSIHKLGFIHRDIK 70
+ +I EF+ G + + L + D QF + + A + + + ++HR +
Sbjct: 83 VMIITEFMENGSLDSFLRQNDG------QFTVIQLVGMLRGIAAGMKYLADMNYVHRALA 136
Query: 71 PDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK-------PSDFSYPPFCSENP 123
N+L+++ K+SDFGL L+ Y K P Y F S +
Sbjct: 137 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 196
Query: 124 QETYRKVM 131
+Y VM
Sbjct: 197 VWSYGIVM 204
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L + + LS + + A ++ +
Sbjct: 101 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 160
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 161 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 205
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L + + LS + + A ++ +
Sbjct: 98 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 157
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 158 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 202
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L + + LS + + A ++ +
Sbjct: 102 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 161
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 162 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 206
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKKD----------------TLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L ++ LS + + A ++ +
Sbjct: 109 LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L + + LS + + A ++ +
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 169 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 213
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 13/60 (21%)
Query: 44 CTQFYIAETALAI--------DSIHKLGFIHRDIKPDNLLLDARGH-----IKLSDFGLC 90
C + + +T L I + +H I+RD+KP+N L+ +G+ I + DFGL
Sbjct: 90 CDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 65 IHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 18 LYLIMEFLPGGDMMTLLMKK----------------DTLSEECTQFYIAETALAIDSIHK 61
LY+I+E+ G++ L + + LS + + A ++ +
Sbjct: 94 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 153
Query: 62 LGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYRDLSQAK 109
IHRD+ N+L+ +K++DFGL + H D+Y+ + +
Sbjct: 154 KKCIHRDLAARNVLVTEDNVMKIADFGLARDI---HHIDYYKKTTNGR 198
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
++ A + + L F+HRD+ N L+ +K+ DFG+ + + TD+YR
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTDYYR 215
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 15/61 (24%)
Query: 50 AETALA-IDSIHKLGFIHRDIKPDNLLL-----DARGHIKLSDFGLCTGLKKSHRTDFYR 103
A+ LA + SIH+ ++RDIKPDN L+ I + DFG+ FYR
Sbjct: 112 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK---------FYR 162
Query: 104 D 104
D
Sbjct: 163 D 163
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 15/61 (24%)
Query: 50 AETALA-IDSIHKLGFIHRDIKPDNLLL-----DARGHIKLSDFGLCTGLKKSHRTDFYR 103
A+ LA + SIH+ ++RDIKPDN L+ I + DFG+ FYR
Sbjct: 111 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK---------FYR 161
Query: 104 D 104
D
Sbjct: 162 D 162
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
++ A + + L F+HRD+ N L+ +K+ DFG+ + + TD+YR
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTDYYR 186
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 50 AETALAIDSIHKLGFIHRDIKPDNLLLDARGHIKLSDFGLCTGLKKSHRTDFYR 103
++ A + + L F+HRD+ N L+ +K+ DFG+ + + TD+YR
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS---RDIYSTDYYR 192
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 15 PINLYLIMEFLPGGDMMTLLM-KKDTLSEECTQFYIAETALAIDSIHKLGFIHRDIKPDN 73
P +L +I G + +++ K L T+ E + +H G +H+D+K N
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN 160
Query: 74 LLLDARGHIKLSDFGL 89
+ D G + ++DFGL
Sbjct: 161 VFYD-NGKVVITDFGL 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,278,093
Number of Sequences: 62578
Number of extensions: 485267
Number of successful extensions: 4315
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 1023
Number of HSP's gapped (non-prelim): 3139
length of query: 351
length of database: 14,973,337
effective HSP length: 100
effective length of query: 251
effective length of database: 8,715,537
effective search space: 2187599787
effective search space used: 2187599787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)