BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17601
(64 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 34 RLKRSRLGVEDFEPLKVIGRGAFGE 58
++K+ RL EDFE LKVIGRGAFGE
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGE 89
>pdb|1PSB|C Chain C, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|D Chain D, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 26
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 21/23 (91%)
Query: 21 KRQQHAQKETEFLRLKRSRLGVE 43
+R HA+KETEFLRLKR+RLG+E
Sbjct: 4 RRSAHARKETEFLRLKRTRLGLE 26
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 33 LRLKRSRLGVEDFEPLKVIGRGAFGE 58
+RLK RL +DFE LKVIGRGAF E
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSE 76
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 34 RLKRSRLGVEDFEPLKVIGRGAFGE 58
+++ R+ ED+E +KVIGRGAFGE
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGE 89
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A
Rock-i:rhoe Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A
Rock-i:rhoe Complex Structure
Length = 406
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 34 RLKRSRLGVEDFEPLKVIGRGAFGE 58
+++ R+ ED+E +KVIGRGAFGE
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGE 89
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In
Complex With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In
Complex With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In
Complex With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In
Complex With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In
Complex With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In
Complex With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In
Complex With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In
Complex With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 34 RLKRSRLGVEDFEPLKVIGRGAFGE 58
+++ R+ ED+E +KVIGRGAFGE
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGE 84
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 35 LKRSRLGVEDFEPLKVIGRGAFGE 58
+K +L EDFE +KVIGRGAFGE
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGE 89
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 35 LKRSRLGVEDFEPLKVIGRGAFGE 58
+K +L EDFE +KVIGRGAFGE
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGE 105
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase
To The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 0.097, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 34 RLKRSRLGVEDFEPLKVIGRGAFGE 58
+++ ++ ED++ +KVIGRGAFGE
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGE 90
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 39 RLGVEDFEPLKVIGRGAFGEC 59
++G+E+FE LKV+G GA+G+
Sbjct: 50 KVGIENFELLKVLGTGAYGKV 70
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 20/21 (95%)
Query: 38 SRLGVEDFEPLKVIGRGAFGE 58
+RLG+++FE ++V+G+G+FG+
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGK 38
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide
From Par-3
Length = 396
Score = 28.9 bits (63), Expect = 0.80, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 38 SRLGVEDFEPLKVIGRGAFGE 58
S LG++DF+ L+VIGRG++ +
Sbjct: 47 SSLGLQDFDLLRVIGRGSYAK 67
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 28.5 bits (62), Expect = 0.90, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 38 SRLGVEDFEPLKVIGRGAFGE 58
S LG++DF+ L+VIGRG++ +
Sbjct: 15 SSLGLQDFDLLRVIGRGSYAK 35
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Query: 42 VEDFEPLKVIGRGAFG---ECPKKID 64
+ DFEP++ +GRG FG E K+D
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVD 29
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 17/19 (89%)
Query: 40 LGVEDFEPLKVIGRGAFGE 58
LG++DF+ L+VIGRG++ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAK 24
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 37 RSRLGVEDFEPLKVIGRGAFGEC 59
R+++ + DF+ LK++G+G FG+
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKV 24
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 17/19 (89%)
Query: 40 LGVEDFEPLKVIGRGAFGE 58
LG++DF+ L+VIGRG++ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAK 20
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 44 DFEPLKVIGRGAFG---ECPKKID 64
DFEP++ +GRG FG E K+D
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVD 30
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 45 FEPLKVIGRGAFGECPKKID 64
+E LKVIG+G+FG+ K D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYD 118
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 38 SRLGVEDFEPLKVIGRGAFG 57
SR+ + +FE LK++G+G FG
Sbjct: 3 SRVTMNEFEYLKLLGKGTFG 22
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 26 AQKETEFLRLKRSRLGV----EDFEPLKVIGRGAFGE 58
+ K T F + K L + DF ++IGRG FGE
Sbjct: 168 SDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGE 204
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 26 AQKETEFLRLKRSRLGV----EDFEPLKVIGRGAFGE 58
+ K T F + K L + DF ++IGRG FGE
Sbjct: 168 SDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGE 204
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 26 AQKETEFLRLKRSRLGV----EDFEPLKVIGRGAFGE 58
+ K T F + K L + DF ++IGRG FGE
Sbjct: 167 SDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGE 203
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 26 AQKETEFLRLKRSRLGV----EDFEPLKVIGRGAFGE 58
+ K T F + K L + DF ++IGRG FGE
Sbjct: 168 SDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGE 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 36 KRSRLGVEDFEPLKVIGRGAFG 57
R R+ + DF L V+G+G+FG
Sbjct: 334 NRDRMKLTDFNFLMVLGKGSFG 355
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The
Protein Kinase C Theta In Complex With Nvp-Xaa228 At
2.32a Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The
Protein Kinase C Theta In Complex With Nvp-Xaa228 At
2.32a Resolution
Length = 352
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 39 RLGVEDFEPLKVIGRGAFGE 58
+L +EDFE K++G+G+FG+
Sbjct: 14 KLKIEDFELHKMLGKGSFGK 33
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 45 FEPLKVIGRGAFGECPKKID 64
+E LKVIG+G FG+ K D
Sbjct: 99 YEVLKVIGKGXFGQVVKAYD 118
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 44 DFEPLKVIGRGAFGECPK 61
DFE + V+G+GAFG+ K
Sbjct: 7 DFEEIAVLGQGAFGQVVK 24
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines
As Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines
As Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 38 SRLGVEDFEPLKVIGRGAFG 57
+R+ + +FE LK++G+G FG
Sbjct: 4 ARVTMNEFEYLKLLGKGTFG 23
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 37 RSRLGVEDFEPLKVIGRGAFGEC 59
+ R+ + +FE LK++G+G FG+
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKV 164
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 37 RSRLGVEDFEPLKVIGRGAFGEC 59
+ R+ + +FE LK++G+G FG+
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKV 167
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp
Length = 303
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 44 DFEPLKVIGRGAFGECPK 61
DFE + V+G+GAFG+ K
Sbjct: 7 DFEEIAVLGQGAFGQVVK 24
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 45 FEPLKVIGRGAFGECPKKID 64
+E LKVIG+G+FG+ K D
Sbjct: 99 YEVLKVIGKGSFGQVVKAYD 118
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 37 RSRLGVEDFEPLKVIGRGAFGE 58
R R+ + DF L V+G+G+FG+
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGK 35
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 25.8 bits (55), Expect = 7.0, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 44 DFEPLKVIGRGAFGECPK 61
DFE + V+G+GAFG+ K
Sbjct: 7 DFEEIAVLGQGAFGQVVK 24
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 25.8 bits (55), Expect = 7.1, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 43 EDFEPLKVIGRGAFGECPK 61
ED+E L IG G++G C K
Sbjct: 6 EDYEVLYTIGTGSYGRCQK 24
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 43 EDFEPLKVIGRGAFGECPK 61
ED+E L IG G++G C K
Sbjct: 6 EDYEVLYTIGTGSYGRCQK 24
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 43 EDFEPLKVIGRGAFGECPK 61
ED+E L IG G++G C K
Sbjct: 6 EDYEVLYTIGTGSYGRCQK 24
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 39 RLGVEDFEPLKVIGRGAFG 57
R+ + +FE LK++G+G FG
Sbjct: 6 RVTMNEFEYLKLLGKGTFG 24
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,316,472
Number of Sequences: 62578
Number of extensions: 32822
Number of successful extensions: 313
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 278
Number of HSP's gapped (non-prelim): 39
length of query: 64
length of database: 14,973,337
effective HSP length: 35
effective length of query: 29
effective length of database: 12,783,107
effective search space: 370710103
effective search space used: 370710103
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)