Query psy17601
Match_columns 64
No_of_seqs 104 out of 763
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 18:16:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17601.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17601hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0605|consensus 99.6 2E-15 4.2E-20 110.4 5.6 62 2-63 100-161 (550)
2 KOG0608|consensus 99.4 5.6E-13 1.2E-17 100.6 5.1 62 2-63 588-649 (1034)
3 KOG0612|consensus 98.4 3.6E-07 7.7E-12 72.3 3.6 55 9-63 40-95 (1317)
4 KOG0598|consensus 98.1 9.4E-07 2E-11 62.7 1.2 25 39-63 21-45 (357)
5 KOG0616|consensus 98.0 6.7E-06 1.4E-10 58.1 3.7 44 20-63 17-64 (355)
6 KOG0694|consensus 97.9 4E-06 8.6E-11 63.5 1.6 26 38-63 363-388 (694)
7 KOG0580|consensus 97.8 1E-05 2.2E-10 55.7 1.6 27 37-63 16-42 (281)
8 KOG0696|consensus 97.8 9.7E-06 2.1E-10 60.0 1.4 26 39-64 345-370 (683)
9 KOG0690|consensus 97.5 3.7E-05 7.9E-10 55.6 1.0 27 37-63 162-188 (516)
10 KOG0591|consensus 97.3 4.1E-05 9E-10 54.2 -0.8 27 38-64 14-40 (375)
11 cd05628 STKc_NDR1 Catalytic do 97.2 0.00017 3.6E-09 49.2 1.1 22 43-64 1-22 (363)
12 cd05599 STKc_NDR_like Catalyti 97.1 0.00017 3.6E-09 48.8 1.0 22 43-64 1-22 (364)
13 cd05621 STKc_ROCK2 Catalytic d 97.1 0.00044 9.5E-09 47.7 2.9 35 29-63 29-63 (370)
14 cd05626 STKc_LATS2 Catalytic d 97.1 0.00019 4.2E-09 49.2 1.0 22 43-64 1-22 (381)
15 cd05598 STKc_LATS Catalytic do 97.1 0.00022 4.8E-09 48.6 1.1 22 43-64 1-22 (376)
16 cd05625 STKc_LATS1 Catalytic d 97.1 0.00022 4.8E-09 48.8 1.0 22 43-64 1-22 (382)
17 KOG1035|consensus 97.0 0.00018 3.9E-09 57.7 0.3 22 42-63 478-499 (1351)
18 cd05088 PTKc_Tie2 Catalytic do 97.0 0.00027 5.9E-09 46.8 1.1 26 38-63 2-27 (303)
19 cd05596 STKc_ROCK Catalytic do 97.0 0.00036 7.7E-09 48.0 1.7 29 36-64 36-64 (370)
20 PHA02882 putative serine/threo 97.0 0.00028 6E-09 46.7 1.0 23 41-63 10-32 (294)
21 cd05624 STKc_MRCK_beta Catalyt 97.0 0.00029 6.3E-09 47.4 1.1 22 43-64 1-22 (331)
22 cd05627 STKc_NDR2 Catalytic do 97.0 0.0003 6.6E-09 47.8 1.1 21 43-63 1-21 (360)
23 PLN03225 Serine/threonine-prot 97.0 0.00038 8.2E-09 51.3 1.6 28 37-64 126-153 (566)
24 cd05103 PTKc_VEGFR2 Catalytic 97.0 0.00033 7.1E-09 47.4 1.1 23 41-63 5-27 (343)
25 PLN03224 probable serine/threo 96.9 0.0005 1.1E-08 50.5 1.9 27 37-63 139-165 (507)
26 PTZ00263 protein kinase A cata 96.9 0.00039 8.4E-09 46.8 0.9 29 36-64 11-39 (329)
27 cd05102 PTKc_VEGFR3 Catalytic 96.9 0.0004 8.6E-09 46.5 0.9 24 40-63 4-27 (338)
28 cd05114 PTKc_Tec_Rlk Catalytic 96.9 0.00037 8E-09 44.6 0.7 24 40-63 1-24 (256)
29 cd05597 STKc_DMPK_like Catalyt 96.9 0.00044 9.5E-09 46.6 1.1 21 43-63 1-21 (331)
30 cd07862 STKc_CDK6 Catalytic do 96.8 0.00059 1.3E-08 44.4 1.5 22 43-64 1-22 (290)
31 cd05622 STKc_ROCK1 Catalytic d 96.8 0.0011 2.3E-08 45.8 2.8 29 36-64 36-64 (371)
32 cd05046 PTK_CCK4 Pseudokinase 96.8 0.00047 1E-08 44.4 1.0 24 40-63 2-25 (275)
33 PTZ00426 cAMP-dependent protei 96.8 0.00044 9.6E-09 47.1 0.9 27 37-63 24-50 (340)
34 cd05612 STKc_PRKX_like Catalyt 96.8 0.00058 1.3E-08 45.0 1.4 22 43-64 1-22 (291)
35 PTZ00284 protein kinase; Provi 96.8 0.00051 1.1E-08 48.6 1.0 23 42-64 128-150 (467)
36 cd06617 PKc_MKK3_6 Catalytic d 96.8 0.00059 1.3E-08 44.0 1.2 22 43-64 1-22 (283)
37 cd05623 STKc_MRCK_alpha Cataly 96.8 0.00056 1.2E-08 46.0 1.1 21 43-63 1-21 (332)
38 cd07871 STKc_PCTAIRE3 Catalyti 96.8 0.00062 1.4E-08 44.7 1.2 24 41-64 3-26 (288)
39 cd07869 STKc_PFTAIRE1 Catalyti 96.8 0.00062 1.3E-08 44.9 1.2 23 42-64 4-26 (303)
40 cd06649 PKc_MEK2 Catalytic dom 96.7 0.00071 1.5E-08 45.5 1.4 25 40-64 2-26 (331)
41 cd05108 PTKc_EGFR Catalytic do 96.7 0.00066 1.4E-08 45.1 1.1 24 40-63 4-27 (316)
42 cd05629 STKc_NDR_like_fungal C 96.7 0.00065 1.4E-08 46.4 1.1 21 43-63 1-21 (377)
43 cd05048 PTKc_Ror Catalytic Dom 96.7 0.0006 1.3E-08 44.1 0.8 24 40-63 2-25 (283)
44 PHA03210 serine/threonine kina 96.7 0.0007 1.5E-08 48.8 1.1 22 42-63 147-168 (501)
45 cd05096 PTKc_DDR1 Catalytic do 96.7 0.00079 1.7E-08 44.3 1.3 24 40-63 2-25 (304)
46 PHA03212 serine/threonine kina 96.7 0.00088 1.9E-08 46.7 1.6 26 39-64 88-113 (391)
47 cd05573 STKc_ROCK_NDR_like Cat 96.7 0.00069 1.5E-08 45.3 1.0 22 43-64 1-22 (350)
48 KOG0585|consensus 96.6 0.00082 1.8E-08 50.1 1.2 26 39-64 93-118 (576)
49 cd05067 PTKc_Lck_Blk Catalytic 96.6 0.00083 1.8E-08 43.0 1.1 24 40-63 3-26 (260)
50 cd05051 PTKc_DDR Catalytic dom 96.6 0.001 2.2E-08 43.2 1.5 24 40-63 2-25 (296)
51 cd05111 PTK_HER3 Pseudokinase 96.6 0.00081 1.8E-08 43.9 1.0 24 40-63 4-27 (279)
52 KOG0600|consensus 96.6 0.00039 8.5E-09 51.8 -0.6 26 39-64 113-138 (560)
53 cd05033 PTKc_EphR Catalytic do 96.6 0.00089 1.9E-08 43.0 1.0 23 41-63 2-24 (266)
54 cd07874 STKc_JNK3 Catalytic do 96.6 0.00096 2.1E-08 45.1 1.1 24 41-64 15-38 (355)
55 cd07872 STKc_PCTAIRE2 Catalyti 96.5 0.0013 2.7E-08 43.5 1.4 25 40-64 3-27 (309)
56 cd05600 STKc_Sid2p_Dbf2p Catal 96.5 0.001 2.3E-08 44.5 1.0 22 43-64 1-22 (333)
57 cd06620 PKc_MAPKK_Byr1_like Ca 96.5 0.00067 1.4E-08 44.2 0.1 24 40-63 2-25 (284)
58 cd05109 PTKc_HER2 Catalytic do 96.5 0.0012 2.6E-08 42.8 1.2 24 40-63 4-27 (279)
59 cd05090 PTKc_Ror1 Catalytic do 96.5 0.0012 2.5E-08 42.9 1.1 24 40-63 2-25 (283)
60 cd07876 STKc_JNK2 Catalytic do 96.5 0.0011 2.4E-08 44.9 0.9 23 42-64 20-42 (359)
61 cd07848 STKc_CDKL5 Catalytic d 96.5 0.0013 2.9E-08 42.7 1.2 22 43-64 1-22 (287)
62 cd06650 PKc_MEK1 Catalytic dom 96.4 0.0014 3.1E-08 44.2 1.4 25 40-64 2-26 (333)
63 cd07873 STKc_PCTAIRE1 Catalyti 96.4 0.0013 2.8E-08 43.2 1.1 25 40-64 3-27 (301)
64 cd05054 PTKc_VEGFR Catalytic d 96.4 0.0011 2.5E-08 44.9 0.9 21 43-63 7-27 (337)
65 cd05097 PTKc_DDR_like Catalyti 96.4 0.0014 3.1E-08 42.9 1.3 23 41-63 3-25 (295)
66 cd05072 PTKc_Lyn Catalytic dom 96.4 0.0011 2.4E-08 42.4 0.7 24 40-63 3-26 (261)
67 cd06622 PKc_MAPKK_PBS2_like Ca 96.4 0.0012 2.6E-08 42.8 0.9 22 43-64 1-22 (286)
68 cd05601 STKc_CRIK Catalytic do 96.4 0.0013 2.8E-08 43.9 1.0 22 43-64 1-22 (330)
69 PRK09188 serine/threonine prot 96.4 0.0014 3.1E-08 46.4 1.2 24 40-63 15-38 (365)
70 cd07878 STKc_p38beta_MAPK11 Ca 96.4 0.0014 3.1E-08 44.0 1.1 23 42-64 14-36 (343)
71 PLN00034 mitogen-activated pro 96.4 0.0011 2.3E-08 45.0 0.5 25 40-64 71-95 (353)
72 cd05104 PTKc_Kit Catalytic dom 96.4 0.0012 2.7E-08 45.4 0.7 24 40-63 32-55 (375)
73 KOG0695|consensus 96.4 0.0011 2.4E-08 48.4 0.5 25 39-63 246-270 (593)
74 cd05091 PTKc_Ror2 Catalytic do 96.4 0.00076 1.7E-08 43.7 -0.3 24 40-63 2-25 (283)
75 cd05049 PTKc_Trk Catalytic dom 96.3 0.0013 2.8E-08 42.3 0.7 24 40-63 2-25 (280)
76 cd06619 PKc_MKK5 Catalytic dom 96.3 0.0019 4.2E-08 42.0 1.4 22 43-64 1-22 (279)
77 cd05089 PTKc_Tie1 Catalytic do 96.3 0.0022 4.7E-08 42.2 1.5 21 43-63 2-22 (297)
78 cd05110 PTKc_HER4 Catalytic do 96.3 0.0018 3.9E-08 42.8 1.0 24 40-63 4-27 (303)
79 cd05032 PTKc_InsR_like Catalyt 96.3 0.0016 3.4E-08 41.9 0.7 24 40-63 3-26 (277)
80 cd05061 PTKc_InsR Catalytic do 96.2 0.0017 3.6E-08 42.5 0.8 24 40-63 3-26 (288)
81 cd07845 STKc_CDK10 Catalytic d 96.2 0.0019 4.2E-08 42.6 1.1 24 41-64 5-28 (309)
82 cd06615 PKc_MEK Catalytic doma 96.2 0.0024 5.2E-08 42.3 1.5 21 43-63 1-21 (308)
83 cd07875 STKc_JNK1 Catalytic do 96.2 0.0019 4.1E-08 43.9 1.0 23 42-64 23-45 (364)
84 cd05050 PTKc_Musk Catalytic do 96.2 0.002 4.3E-08 41.9 1.1 24 40-63 2-25 (288)
85 cd05112 PTKc_Itk Catalytic dom 96.2 0.002 4.4E-08 41.0 1.0 23 41-63 2-24 (256)
86 cd05106 PTKc_CSF-1R Catalytic 96.2 0.0015 3.4E-08 45.0 0.5 24 40-63 35-58 (374)
87 PTZ00036 glycogen synthase kin 96.2 0.002 4.2E-08 45.7 1.0 25 40-64 63-87 (440)
88 KOG0201|consensus 96.2 0.0022 4.7E-08 47.1 1.2 22 43-64 13-34 (467)
89 cd05066 PTKc_EphR_A Catalytic 96.2 0.0016 3.5E-08 41.9 0.5 23 41-63 2-24 (267)
90 cd06646 STKc_MAP4K5 Catalytic 96.1 0.0022 4.8E-08 41.1 1.0 23 41-63 7-29 (267)
91 cd05064 PTKc_EphR_A10 Catalyti 96.1 0.0022 4.9E-08 41.4 1.0 24 40-63 2-25 (266)
92 KOG1152|consensus 96.1 0.0027 5.8E-08 48.6 1.5 25 40-64 558-582 (772)
93 cd06638 STKc_myosinIIIA Cataly 96.1 0.0028 6E-08 41.0 1.3 25 40-64 15-39 (286)
94 cd05070 PTKc_Fyn_Yrk Catalytic 96.1 0.0024 5.2E-08 40.9 1.0 24 40-63 3-26 (260)
95 cd08228 STKc_Nek6 Catalytic do 96.0 0.0031 6.7E-08 40.3 1.3 22 42-63 1-22 (267)
96 cd05095 PTKc_DDR2 Catalytic do 96.0 0.0029 6.2E-08 41.5 1.1 21 43-63 5-25 (296)
97 cd06616 PKc_MKK4 Catalytic dom 96.0 0.002 4.2E-08 41.9 0.3 23 41-63 2-24 (288)
98 cd05098 PTKc_FGFR1 Catalytic d 96.0 0.0019 4.2E-08 42.6 0.2 25 39-63 14-38 (307)
99 cd08229 STKc_Nek7 Catalytic do 96.0 0.0029 6.3E-08 40.5 1.0 22 42-63 1-22 (267)
100 KOG1164|consensus 96.0 0.0032 6.9E-08 42.9 1.1 21 44-64 19-39 (322)
101 PHA03209 serine/threonine kina 95.9 0.0035 7.5E-08 42.8 1.2 24 41-64 64-87 (357)
102 cd07844 STKc_PCTAIRE_like Cata 95.9 0.0036 7.7E-08 40.7 1.1 24 41-64 3-26 (291)
103 cd05036 PTKc_ALK_LTK Catalytic 95.9 0.0031 6.6E-08 40.9 0.8 24 40-63 3-26 (277)
104 cd05059 PTKc_Tec_like Catalyti 95.9 0.0032 7E-08 40.3 0.9 23 41-63 2-24 (256)
105 cd05113 PTKc_Btk_Bmx Catalytic 95.9 0.0027 5.9E-08 40.8 0.5 23 41-63 2-24 (256)
106 cd05063 PTKc_EphR_A2 Catalytic 95.9 0.0029 6.4E-08 40.5 0.7 24 40-63 2-25 (268)
107 cd05093 PTKc_TrkB Catalytic do 95.9 0.0035 7.5E-08 41.0 1.0 24 40-63 2-25 (288)
108 cd05610 STKc_MASTL Catalytic d 95.9 0.0035 7.6E-08 46.9 1.1 24 41-64 2-25 (669)
109 cd06652 STKc_MEKK2 Catalytic d 95.9 0.0045 9.7E-08 39.7 1.4 23 42-64 1-23 (265)
110 cd07837 STKc_CdkB_plant Cataly 95.8 0.0043 9.3E-08 40.3 1.3 22 43-64 1-22 (295)
111 cd05039 PTKc_Csk_like Catalyti 95.8 0.0048 1E-07 39.3 1.5 24 40-63 3-26 (256)
112 cd05068 PTKc_Frk_like Catalyti 95.8 0.0039 8.6E-08 39.9 1.0 24 40-63 3-26 (261)
113 cd05092 PTKc_TrkA Catalytic do 95.8 0.0047 1E-07 40.2 1.4 24 40-63 2-25 (280)
114 cd07866 STKc_BUR1 Catalytic do 95.8 0.0039 8.3E-08 40.6 1.0 23 41-63 6-28 (311)
115 cd05073 PTKc_Hck Catalytic dom 95.8 0.0047 1E-07 39.6 1.3 24 40-63 3-26 (260)
116 cd05034 PTKc_Src_like Catalyti 95.8 0.0044 9.5E-08 39.5 1.2 24 40-63 3-26 (261)
117 KOG0610|consensus 95.8 0.0023 4.9E-08 46.9 -0.2 29 36-64 70-98 (459)
118 PTZ00283 serine/threonine prot 95.8 0.0043 9.3E-08 44.8 1.2 26 39-64 28-53 (496)
119 cd05148 PTKc_Srm_Brk Catalytic 95.8 0.0024 5.2E-08 40.7 -0.1 24 41-64 4-27 (261)
120 cd05065 PTKc_EphR_B Catalytic 95.8 0.0037 8E-08 40.2 0.7 23 41-63 2-24 (269)
121 cd05101 PTKc_FGFR2 Catalytic d 95.7 0.0031 6.7E-08 41.5 0.3 25 39-63 11-35 (304)
122 cd05053 PTKc_FGFR Catalytic do 95.7 0.0033 7.2E-08 40.9 0.5 25 39-63 8-32 (293)
123 cd05082 PTKc_Csk Catalytic dom 95.7 0.0042 9.1E-08 39.7 0.9 24 40-63 3-26 (256)
124 cd05062 PTKc_IGF-1R Catalytic 95.7 0.0038 8.2E-08 40.4 0.7 23 41-63 4-26 (277)
125 cd05105 PTKc_PDGFR_alpha Catal 95.7 0.0051 1.1E-07 43.2 1.4 25 39-63 33-57 (400)
126 cd05100 PTKc_FGFR3 Catalytic d 95.7 0.0036 7.9E-08 41.9 0.5 22 42-63 11-32 (334)
127 cd05057 PTKc_EGFR_like Catalyt 95.7 0.0042 9E-08 40.2 0.8 24 40-63 4-27 (279)
128 cd05038 PTKc_Jak_rpt2 Catalyti 95.7 0.0058 1.2E-07 39.2 1.4 23 41-63 2-24 (284)
129 cd07865 STKc_CDK9 Catalytic do 95.7 0.0043 9.4E-08 40.4 0.9 24 41-64 10-33 (310)
130 cd05107 PTKc_PDGFR_beta Cataly 95.6 0.0036 7.8E-08 44.1 0.4 24 40-63 34-57 (401)
131 PTZ00266 NIMA-related protein 95.6 0.0048 1E-07 49.0 1.0 26 39-64 9-34 (1021)
132 cd07846 STKc_CDKL2_3 Catalytic 95.6 0.006 1.3E-07 39.4 1.3 22 43-64 1-22 (286)
133 cd06618 PKc_MKK7 Catalytic dom 95.6 0.006 1.3E-07 40.0 1.3 25 39-63 11-35 (296)
134 cd07870 STKc_PFTAIRE2 Catalyti 95.6 0.005 1.1E-07 40.1 0.8 22 42-63 4-25 (291)
135 cd05071 PTKc_Src Catalytic dom 95.5 0.0051 1.1E-07 39.6 0.8 24 41-64 4-27 (262)
136 cd05581 STKc_PDK1 Catalytic do 95.5 0.0071 1.5E-07 38.6 1.4 22 43-64 1-22 (280)
137 cd06610 STKc_OSR1_SPAK Catalyt 95.5 0.0073 1.6E-07 38.3 1.4 21 43-63 1-21 (267)
138 cd05083 PTKc_Chk Catalytic dom 95.5 0.0045 9.7E-08 39.5 0.4 23 41-63 4-26 (254)
139 KOG0659|consensus 95.4 0.0058 1.3E-07 42.9 0.8 22 43-64 2-23 (318)
140 cd06644 STKc_STK10_LOK Catalyt 95.4 0.006 1.3E-07 39.8 0.8 21 43-63 12-32 (292)
141 cd05043 PTK_Ryk Pseudokinase d 95.4 0.0062 1.3E-07 39.3 0.8 24 40-63 3-26 (280)
142 KOG0592|consensus 95.4 0.0077 1.7E-07 45.4 1.4 26 39-64 69-94 (604)
143 PHA03207 serine/threonine kina 95.4 0.0071 1.5E-07 41.8 1.1 21 43-63 92-112 (392)
144 cd05079 PTKc_Jak1_rpt2 Catalyt 95.4 0.008 1.7E-07 39.1 1.3 20 44-63 5-24 (284)
145 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 95.4 0.009 2E-07 38.7 1.5 21 43-63 4-24 (284)
146 cd06653 STKc_MEKK3_like_1 Cata 95.3 0.0088 1.9E-07 38.4 1.4 22 43-64 2-23 (264)
147 cd05055 PTKc_PDGFR Catalytic d 95.3 0.0049 1.1E-07 40.9 0.2 25 39-63 31-55 (302)
148 cd07850 STKc_JNK Catalytic dom 95.3 0.0073 1.6E-07 40.8 1.0 23 42-64 15-37 (353)
149 cd07864 STKc_CDK12 Catalytic d 95.3 0.0066 1.4E-07 39.5 0.7 24 40-63 4-27 (302)
150 cd06651 STKc_MEKK3 Catalytic d 95.3 0.01 2.3E-07 38.1 1.6 22 43-64 2-23 (266)
151 cd07849 STKc_ERK1_2_like Catal 95.3 0.007 1.5E-07 40.6 0.7 22 43-64 5-26 (336)
152 cd06645 STKc_MAP4K3 Catalytic 95.2 0.0045 9.7E-08 39.7 -0.2 25 40-64 6-30 (267)
153 cd06605 PKc_MAPKK Catalytic do 95.2 0.0077 1.7E-07 38.3 0.9 21 43-63 1-21 (265)
154 cd05094 PTKc_TrkC Catalytic do 95.2 0.0073 1.6E-07 39.5 0.7 24 40-63 2-25 (291)
155 cd07843 STKc_CDC2L1 Catalytic 95.2 0.007 1.5E-07 39.4 0.6 24 41-64 3-26 (293)
156 cd07847 STKc_CDKL1_4 Catalytic 95.2 0.0095 2.1E-07 38.3 1.2 22 43-64 1-22 (286)
157 cd05574 STKc_phototropin_like 95.2 0.0095 2.1E-07 39.3 1.2 22 43-64 1-22 (316)
158 cd07877 STKc_p38alpha_MAPK14 C 95.2 0.0082 1.8E-07 40.6 0.9 24 41-64 15-38 (345)
159 PLN00009 cyclin-dependent kina 95.2 0.011 2.4E-07 38.5 1.5 23 42-64 1-23 (294)
160 cd07880 STKc_p38gamma_MAPK12 C 95.2 0.0086 1.9E-07 40.5 1.0 22 42-63 14-35 (343)
161 cd05609 STKc_MAST Catalytic do 95.2 0.0097 2.1E-07 39.2 1.2 21 43-63 1-21 (305)
162 KOG0663|consensus 95.1 0.0054 1.2E-07 44.3 -0.1 24 41-64 74-97 (419)
163 KOG0589|consensus 95.1 0.0056 1.2E-07 44.6 -0.0 22 42-63 3-24 (426)
164 cd08224 STKc_Nek6_Nek7 Catalyt 95.1 0.012 2.5E-07 37.4 1.4 21 43-63 2-22 (267)
165 PRK13184 pknD serine/threonine 95.1 0.0095 2.1E-07 46.9 1.1 23 42-64 1-23 (932)
166 cd07854 STKc_MAPK4_6 Catalytic 95.1 0.0099 2.1E-07 40.1 1.1 22 43-64 5-26 (342)
167 cd05099 PTKc_FGFR4 Catalytic d 95.1 0.0072 1.6E-07 40.1 0.4 24 40-63 9-32 (314)
168 KOG0667|consensus 95.0 0.0084 1.8E-07 45.3 0.7 21 44-64 187-207 (586)
169 cd05056 PTKc_FAK Catalytic dom 95.0 0.0097 2.1E-07 38.2 0.9 24 40-63 3-26 (270)
170 cd06623 PKc_MAPKK_plant_like C 95.0 0.011 2.5E-07 37.4 1.2 22 43-64 1-22 (264)
171 cd05580 STKc_PKA Catalytic dom 95.0 0.011 2.4E-07 38.6 1.1 22 43-64 1-22 (290)
172 cd06625 STKc_MEKK3_like Cataly 95.0 0.015 3.3E-07 37.0 1.6 21 43-63 2-22 (263)
173 cd06621 PKc_MAPKK_Pek1_like Ca 95.0 0.011 2.5E-07 38.5 1.1 22 43-64 1-22 (287)
174 KOG0595|consensus 94.9 0.013 2.9E-07 42.7 1.5 23 41-63 8-30 (429)
175 cd06641 STKc_MST3 Catalytic do 94.9 0.011 2.4E-07 38.3 0.8 20 44-63 5-24 (277)
176 cd07868 STKc_CDK8 Catalytic do 94.9 0.013 2.9E-07 38.6 1.2 16 48-63 6-21 (317)
177 cd07858 STKc_TEY_MAPK_plant Ca 94.8 0.014 3E-07 39.3 1.2 22 43-64 5-26 (337)
178 cd05052 PTKc_Abl Catalytic dom 94.8 0.0098 2.1E-07 38.2 0.5 24 40-63 3-26 (263)
179 KOG0986|consensus 94.8 0.013 2.8E-07 43.9 1.1 26 37-62 179-204 (591)
180 KOG0666|consensus 94.8 0.011 2.4E-07 42.7 0.7 22 42-63 23-44 (438)
181 cd06637 STKc_TNIK Catalytic do 94.8 0.0096 2.1E-07 38.1 0.3 21 43-63 6-26 (272)
182 cd07856 STKc_Sty1_Hog1 Catalyt 94.7 0.013 2.9E-07 39.4 1.0 23 42-64 9-31 (328)
183 cd06609 STKc_MST3_like Catalyt 94.7 0.013 2.9E-07 37.7 0.9 22 43-64 1-22 (274)
184 cd06608 STKc_myosinIII_like Ca 94.7 0.015 3.3E-07 36.9 1.2 23 42-64 5-27 (275)
185 cd06636 STKc_MAP4K4_6 Catalyti 94.7 0.014 2.9E-07 37.8 0.9 24 41-64 14-37 (282)
186 KOG0597|consensus 94.7 0.013 2.9E-07 45.0 0.9 23 42-64 1-23 (808)
187 cd06656 STKc_PAK3 Catalytic do 94.7 0.014 3.1E-07 38.4 1.0 21 43-63 19-39 (297)
188 cd05080 PTKc_Tyk2_rpt2 Catalyt 94.6 0.018 3.9E-07 37.3 1.4 18 45-62 6-23 (283)
189 cd06613 STKc_MAP4K3_like Catal 94.6 0.016 3.6E-07 36.7 1.1 21 43-63 3-23 (262)
190 KOG0661|consensus 94.5 0.0085 1.8E-07 44.7 -0.4 23 41-63 8-30 (538)
191 cd06639 STKc_myosinIIIB Cataly 94.5 0.019 4E-07 37.4 1.3 22 42-63 21-42 (291)
192 KOG0198|consensus 94.5 0.018 3.9E-07 40.3 1.2 22 42-63 16-37 (313)
193 cd06611 STKc_SLK_like Catalyti 94.5 0.01 2.2E-07 38.3 0.0 21 43-63 5-25 (280)
194 cd06647 STKc_PAK_I Catalytic d 94.5 0.018 3.9E-07 37.9 1.2 22 42-63 18-39 (293)
195 cd07833 STKc_CDKL Catalytic do 94.4 0.02 4.3E-07 36.9 1.2 22 43-64 1-22 (288)
196 cd07855 STKc_ERK5 Catalytic do 94.4 0.019 4.1E-07 38.5 1.1 22 43-64 5-26 (334)
197 cd06640 STKc_MST4 Catalytic do 94.2 0.017 3.7E-07 37.4 0.6 22 43-64 4-25 (277)
198 cd07879 STKc_p38delta_MAPK13 C 94.2 0.021 4.6E-07 38.5 1.0 22 43-64 15-36 (342)
199 KOG0583|consensus 94.2 0.026 5.7E-07 39.9 1.5 24 40-63 14-37 (370)
200 cd05069 PTKc_Yes Catalytic dom 94.1 0.02 4.3E-07 36.7 0.7 23 41-63 4-26 (260)
201 cd07852 STKc_MAPK15 Catalytic 94.1 0.016 3.4E-07 38.8 0.3 23 42-64 6-28 (337)
202 cd06917 STKc_NAK1_like Catalyt 94.1 0.023 4.9E-07 36.6 1.0 20 44-63 2-21 (277)
203 cd06654 STKc_PAK1 Catalytic do 94.1 0.026 5.6E-07 37.2 1.2 22 42-63 19-40 (296)
204 PHA03211 serine/threonine kina 94.1 0.024 5.3E-07 40.9 1.2 23 42-64 168-190 (461)
205 KOG0593|consensus 94.0 0.024 5.2E-07 40.7 1.0 23 42-64 1-23 (396)
206 cd06612 STKc_MST1_2 Catalytic 94.0 0.027 5.8E-07 35.6 1.2 21 43-63 3-23 (256)
207 cd06607 STKc_TAO Catalytic dom 94.0 0.044 9.6E-07 36.1 2.2 22 42-63 14-35 (307)
208 cd07867 STKc_CDC2L6 Catalytic 93.9 0.028 6.1E-07 36.9 1.2 15 49-63 7-21 (317)
209 KOG0658|consensus 93.9 0.022 4.7E-07 40.9 0.7 20 44-63 25-44 (364)
210 KOG1163|consensus 93.9 0.022 4.8E-07 40.0 0.7 23 41-63 13-35 (341)
211 cd07851 STKc_p38 Catalytic dom 93.8 0.028 6E-07 38.0 1.0 24 41-64 13-36 (343)
212 KOG0614|consensus 93.7 0.069 1.5E-06 40.8 3.0 28 36-63 413-440 (732)
213 KOG0615|consensus 93.7 0.028 6.1E-07 41.4 0.9 22 42-63 171-192 (475)
214 cd06643 STKc_SLK Catalytic dom 93.5 0.025 5.5E-07 36.6 0.4 20 45-64 7-26 (282)
215 KOG0594|consensus 93.5 0.017 3.6E-07 40.9 -0.5 23 42-64 10-32 (323)
216 cd06629 STKc_MAPKKK_Bck1_like 93.5 0.041 8.8E-07 35.3 1.3 19 45-63 3-21 (272)
217 KOG1151|consensus 93.5 0.024 5.2E-07 42.8 0.3 22 43-64 463-484 (775)
218 KOG0576|consensus 93.4 0.026 5.7E-07 43.8 0.3 23 42-64 14-36 (829)
219 PHA03390 pk1 serine/threonine- 93.1 0.043 9.3E-07 35.6 1.0 21 43-63 14-36 (267)
220 KOG0611|consensus 93.0 0.028 6.1E-07 42.0 -0.0 22 43-64 53-74 (668)
221 cd06624 STKc_ASK Catalytic dom 93.0 0.066 1.4E-06 34.3 1.7 24 41-64 6-29 (268)
222 cd06642 STKc_STK25-YSK1 Cataly 92.9 0.028 6.1E-07 36.3 -0.1 22 43-64 4-25 (277)
223 cd06635 STKc_TAO1 Catalytic do 92.9 0.043 9.3E-07 36.5 0.8 21 43-63 25-45 (317)
224 KOG0032|consensus 92.8 0.049 1.1E-06 38.8 1.1 21 43-63 35-55 (382)
225 PTZ00024 cyclin-dependent prot 92.8 0.056 1.2E-06 36.1 1.2 22 43-64 8-30 (335)
226 KOG0194|consensus 92.8 0.055 1.2E-06 40.0 1.3 22 42-63 156-177 (474)
227 smart00090 RIO RIO-like kinase 92.7 0.051 1.1E-06 36.0 0.9 20 44-63 29-48 (237)
228 cd06655 STKc_PAK2 Catalytic do 92.5 0.049 1.1E-06 36.0 0.7 21 43-63 19-39 (296)
229 PRK10359 lipopolysaccharide co 92.4 0.072 1.6E-06 35.9 1.4 22 42-63 30-51 (232)
230 KOG0193|consensus 92.3 0.053 1.2E-06 41.5 0.7 22 42-63 391-412 (678)
231 PTZ00267 NIMA-related protein 92.1 0.055 1.2E-06 38.7 0.5 21 44-64 68-88 (478)
232 KOG0577|consensus 92.0 0.052 1.1E-06 42.2 0.4 20 45-64 28-47 (948)
233 cd05144 RIO2_C RIO kinase fami 91.6 0.11 2.3E-06 32.8 1.4 19 45-63 17-35 (198)
234 KOG0660|consensus 91.5 0.095 2.1E-06 37.7 1.2 22 43-64 22-43 (359)
235 KOG1026|consensus 91.3 0.05 1.1E-06 42.4 -0.4 24 40-63 483-506 (774)
236 cd06634 STKc_TAO2 Catalytic do 91.3 0.068 1.5E-06 35.4 0.3 22 43-64 15-36 (308)
237 cd06633 STKc_TAO3 Catalytic do 90.8 0.12 2.6E-06 34.4 1.1 19 45-63 23-41 (313)
238 cd06614 STKc_PAK Catalytic dom 90.7 0.12 2.6E-06 33.5 1.0 24 41-64 17-40 (286)
239 KOG0669|consensus 90.7 0.025 5.5E-07 40.0 -2.3 22 42-63 16-37 (376)
240 KOG1166|consensus 90.6 0.11 2.3E-06 41.5 0.9 23 41-63 696-718 (974)
241 KOG1187|consensus 90.5 0.15 3.3E-06 35.9 1.5 21 43-63 75-95 (361)
242 KOG0581|consensus 90.4 0.12 2.6E-06 37.2 0.9 25 39-63 75-99 (364)
243 KOG0575|consensus 90.0 0.15 3.2E-06 38.8 1.0 22 43-64 18-39 (592)
244 cd06659 STKc_PAK6 Catalytic do 89.8 0.13 2.9E-06 33.9 0.7 22 43-64 21-42 (297)
245 KOG0606|consensus 89.8 0.23 4.9E-06 40.4 2.0 26 39-64 79-104 (1205)
246 KOG1095|consensus 89.6 0.18 3.9E-06 40.5 1.3 23 40-62 689-711 (1025)
247 PLN00113 leucine-rich repeat r 89.6 0.18 3.8E-06 38.6 1.3 20 44-63 691-710 (968)
248 KOG0671|consensus 89.5 0.17 3.6E-06 37.0 1.0 23 42-64 88-110 (415)
249 cd06658 STKc_PAK5 Catalytic do 88.6 0.16 3.4E-06 33.5 0.4 21 43-63 22-42 (292)
250 KOG0197|consensus 88.6 0.091 2E-06 38.9 -0.9 20 44-63 207-226 (468)
251 cd06648 STKc_PAK_II Catalytic 88.4 0.21 4.6E-06 32.6 0.9 21 43-63 19-39 (285)
252 KOG0579|consensus 88.2 0.11 2.4E-06 40.9 -0.7 25 39-63 27-52 (1187)
253 cd06657 STKc_PAK4 Catalytic do 87.9 0.21 4.6E-06 32.9 0.7 20 44-63 21-40 (292)
254 KOG0586|consensus 87.9 0.29 6.2E-06 37.3 1.4 26 39-64 52-77 (596)
255 KOG4279|consensus 87.9 0.26 5.6E-06 39.2 1.2 15 50-64 582-596 (1226)
256 KOG0192|consensus 87.9 0.22 4.8E-06 35.3 0.7 24 40-63 38-61 (362)
257 PRK09605 bifunctional UGMP fam 87.4 0.34 7.4E-06 35.3 1.5 19 45-63 335-353 (535)
258 KOG0662|consensus 87.0 0.28 6E-06 33.5 0.8 21 43-63 2-22 (292)
259 PRK10345 hypothetical protein; 86.5 0.43 9.4E-06 31.3 1.5 17 45-61 4-20 (210)
260 KOG1345|consensus 85.9 0.27 5.8E-06 35.2 0.3 25 39-63 19-44 (378)
261 KOG3653|consensus 84.4 0.44 9.5E-06 35.8 0.8 23 41-63 208-230 (534)
262 KOG1290|consensus 83.6 0.49 1.1E-05 35.9 0.8 22 43-64 78-99 (590)
263 KOG2345|consensus 82.4 0.6 1.3E-05 32.8 0.8 25 39-63 17-41 (302)
264 PRK12274 serine/threonine prot 82.1 0.92 2E-05 30.5 1.6 20 45-64 4-23 (218)
265 PF13035 DUF3896: Protein of u 81.2 3.2 7E-05 22.6 3.2 28 2-29 19-46 (61)
266 KOG0584|consensus 81.2 0.76 1.6E-05 35.3 1.0 15 50-64 47-61 (632)
267 KOG0668|consensus 81.0 0.27 5.8E-06 34.6 -1.3 23 41-63 36-58 (338)
268 KOG2052|consensus 80.4 0.73 1.6E-05 34.5 0.7 21 43-63 211-231 (513)
269 KOG4250|consensus 78.6 1 2.3E-05 35.1 1.1 18 46-63 16-33 (732)
270 KOG1165|consensus 77.5 1.2 2.7E-05 32.6 1.1 19 44-62 29-47 (449)
271 KOG0574|consensus 77.3 0.28 6E-06 35.7 -2.2 21 43-63 33-53 (502)
272 KOG1025|consensus 75.0 1.4 2.9E-05 35.7 0.8 19 45-63 698-716 (1177)
273 KOG1006|consensus 74.6 0.76 1.6E-05 32.8 -0.5 23 39-61 60-82 (361)
274 PHA02988 hypothetical protein; 74.4 1.4 3.1E-05 28.9 0.8 24 40-63 15-40 (283)
275 KOG1167|consensus 73.8 0.69 1.5E-05 34.0 -0.9 23 42-64 35-57 (418)
276 KOG0582|consensus 72.2 2.3 4.9E-05 32.0 1.4 25 39-63 22-46 (516)
277 PF11181 YflT: Heat induced st 72.2 6.4 0.00014 22.9 3.1 25 2-26 71-95 (103)
278 KOG0200|consensus 71.7 2 4.3E-05 32.2 1.0 20 44-63 297-316 (609)
279 KOG4257|consensus 71.4 2.8 6.1E-05 33.2 1.8 16 48-63 394-409 (974)
280 KOG1989|consensus 71.0 2.2 4.7E-05 33.4 1.1 21 44-64 38-58 (738)
281 KOG0587|consensus 70.8 2.2 4.8E-05 34.2 1.2 23 41-63 17-39 (953)
282 PRK04750 ubiB putative ubiquin 70.8 2.3 5E-05 31.8 1.2 21 42-63 119-139 (537)
283 KOG1033|consensus 68.8 2.1 4.6E-05 32.2 0.7 23 40-62 46-68 (516)
284 KOG0596|consensus 68.0 2.1 4.5E-05 33.1 0.5 22 42-63 360-381 (677)
285 KOG4258|consensus 67.4 2.8 6E-05 33.8 1.0 15 48-62 999-1013(1025)
286 KOG4717|consensus 67.0 1.6 3.5E-05 33.9 -0.3 21 43-63 18-38 (864)
287 KOG0664|consensus 65.3 4.4 9.5E-05 29.3 1.6 23 42-64 52-74 (449)
288 KOG0199|consensus 64.2 4.8 0.0001 32.3 1.8 57 6-62 46-129 (1039)
289 KOG0196|consensus 62.5 4 8.7E-05 32.8 1.1 25 39-63 625-649 (996)
290 PF08988 DUF1895: Protein of u 57.8 18 0.00039 20.1 3.0 44 3-48 3-46 (68)
291 PF02216 B: B domain; InterPr 56.9 17 0.00038 19.5 2.7 24 4-27 13-36 (54)
292 KOG0984|consensus 56.2 3.5 7.6E-05 28.6 -0.1 19 42-60 45-63 (282)
293 TIGR01982 UbiB 2-polyprenylphe 53.3 6.4 0.00014 28.4 0.8 20 43-63 118-137 (437)
294 KOG1094|consensus 51.4 8 0.00017 30.4 1.1 19 45-63 540-558 (807)
295 cd07921 PCA_45_Doxase_A_like S 50.8 19 0.00041 21.9 2.5 18 5-22 37-54 (106)
296 cd07321 Extradiol_Dioxygenase_ 50.7 17 0.00037 20.4 2.2 19 4-22 26-44 (77)
297 cd07923 Gallate_dioxygenase_C 49.1 18 0.00039 21.5 2.2 20 3-22 27-46 (94)
298 KOG4236|consensus 48.2 7.3 0.00016 30.5 0.5 19 45-63 564-584 (888)
299 PF10346 Con-6: Conidiation pr 45.8 39 0.00084 16.7 3.3 23 4-26 10-32 (36)
300 PF14167 YfkD: YfkD-like prote 44.4 11 0.00024 25.6 0.8 13 50-62 181-193 (232)
301 KOG1024|consensus 44.2 12 0.00027 28.2 1.1 28 36-63 277-304 (563)
302 KOG4645|consensus 44.1 12 0.00026 31.6 1.2 14 50-63 1242-1255(1509)
303 cd07922 CarBa CarBa is the A s 43.7 25 0.00055 20.2 2.2 19 4-22 27-45 (81)
304 KOG0033|consensus 43.6 3.4 7.3E-05 29.4 -1.8 20 43-62 11-30 (355)
305 PF14531 Kinase-like: Kinase-l 40.7 8.9 0.00019 26.7 -0.1 19 46-64 15-33 (288)
306 PF07746 LigA: Aromatic-ring-o 40.5 34 0.00074 19.8 2.4 20 3-22 20-39 (88)
307 cd07925 LigA_like_1 The A subu 40.0 37 0.0008 20.6 2.6 18 5-22 37-54 (106)
308 KOG0983|consensus 37.8 14 0.00031 26.7 0.6 27 37-63 86-112 (391)
309 PF04201 TPD52: Tumour protein 37.3 55 0.0012 21.3 3.2 22 10-31 23-44 (162)
310 PF14385 DUF4416: Domain of un 37.0 1E+02 0.0022 19.9 4.4 51 13-63 68-133 (164)
311 PF08006 DUF1700: Protein of u 34.8 77 0.0017 19.9 3.6 24 2-27 8-31 (181)
312 PF13019 Telomere_Sde2: Telome 34.6 14 0.00029 24.0 0.1 10 50-59 86-95 (162)
313 PRK13378 protocatechuate 4,5-d 34.6 49 0.0011 20.4 2.5 18 5-22 48-65 (117)
314 PF03109 ABC1: ABC1 family; I 34.4 14 0.0003 22.0 0.1 19 44-63 13-31 (119)
315 PRK13379 protocatechuate 4,5-d 33.9 51 0.0011 20.4 2.5 19 4-22 48-66 (119)
316 COG2112 Predicted Ser/Thr prot 33.4 22 0.00048 23.9 0.9 16 48-63 27-42 (201)
317 TIGR02792 PCA_ligA protocatech 32.9 54 0.0012 20.2 2.5 18 5-22 42-59 (117)
318 cd07924 PCA_45_Doxase_A The A 31.8 59 0.0013 20.2 2.6 18 5-22 45-62 (121)
319 PRK11199 tyrA bifunctional cho 30.7 2E+02 0.0043 20.4 5.7 15 44-58 97-112 (374)
320 PRK13377 protocatechuate 4,5-d 29.4 67 0.0014 20.2 2.5 18 5-22 48-65 (129)
321 PF08312 cwf21: cwf21 domain; 29.4 89 0.0019 16.0 2.9 25 3-27 15-39 (46)
322 KOG0590|consensus 28.6 20 0.00044 27.2 0.2 22 42-63 19-40 (601)
323 PF08278 DnaG_DnaB_bind: DNA p 28.5 82 0.0018 18.4 2.8 21 3-23 105-125 (127)
324 PF13348 Y_phosphatase3C: Tyro 28.5 98 0.0021 16.2 2.9 22 4-25 45-67 (68)
325 PF15188 CCDC-167: Coiled-coil 28.0 1.2E+02 0.0027 17.5 3.4 23 2-24 22-44 (85)
326 PF06154 YagB_YeeU_YfjZ: YagB/ 26.8 40 0.00087 20.4 1.2 11 53-63 89-99 (103)
327 PF09845 DUF2072: Zn-ribbon co 25.9 30 0.00066 21.7 0.6 17 41-57 82-98 (131)
328 PF10777 YlaC: Inner membrane 25.7 1.2E+02 0.0026 19.6 3.3 27 2-28 113-139 (155)
329 TIGR02433 lysidine_TilS_C tRNA 25.0 45 0.00098 16.2 1.0 19 2-20 21-39 (47)
330 KOG0588|consensus 24.5 32 0.00069 27.4 0.6 23 41-63 10-32 (786)
331 TIGR03142 cytochro_ccmI cytoch 24.4 1.6E+02 0.0035 17.3 4.0 27 2-28 46-72 (117)
332 PF06570 DUF1129: Protein of u 24.2 1.6E+02 0.0035 19.0 3.8 25 3-27 12-36 (206)
333 PF07798 DUF1640: Protein of u 23.5 1.6E+02 0.0034 18.7 3.6 25 3-27 6-30 (177)
334 KOG0578|consensus 22.8 40 0.00088 25.8 0.8 23 42-64 272-294 (550)
335 PRK07668 hypothetical protein; 22.8 1.7E+02 0.0036 20.2 3.8 25 3-27 12-36 (254)
336 PF13095 FTA2: Kinetochore Sim 22.8 56 0.0012 21.8 1.4 21 43-63 37-58 (207)
337 PF06371 Drf_GBD: Diaphanous G 22.0 1.5E+02 0.0032 18.1 3.2 22 2-23 10-31 (187)
338 PF02750 Synapsin_C: Synapsin, 20.8 49 0.0011 22.3 0.8 25 37-61 43-69 (203)
339 PF08671 SinI: Anti-repressor 20.6 1.2E+02 0.0025 14.3 2.4 20 1-20 5-24 (30)
No 1
>KOG0605|consensus
Probab=99.59 E-value=2e-15 Score=110.39 Aligned_cols=62 Identities=50% Similarity=0.754 Sum_probs=59.9
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccCCccceEeeec
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQKETEFLRLKRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~~e~~~~r~~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..||+.|+..+++++++...++.+.++|++|+|++|.+++++||+++++||+||||+||||+
T Consensus 100 ~~le~~l~~~~~s~~~~~~~~~~~~~kEte~lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLar 161 (550)
T KOG0605|consen 100 KELEEKLASEDVSEEEQNELLKSLLSKETEYLRLRRTRLSLDDFELLKVIGKGAFGEVRLAR 161 (550)
T ss_pred HHHHHHHhhccccHHHHHHHHHHHhhHHHHHHHhccccCCcccchhheeeccccceeEEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999996
No 2
>KOG0608|consensus
Probab=99.38 E-value=5.6e-13 Score=100.65 Aligned_cols=62 Identities=32% Similarity=0.527 Sum_probs=60.5
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccCCccceEeeec
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQKETEFLRLKRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~~e~~~~r~~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++||++|...||++..++++++.+.++|++|.|++|.++..+.|-.|+.||=|+||+|.||+
T Consensus 588 ~QLEkEM~kagLpd~~q~qMrkmL~QKESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~ 649 (1034)
T KOG0608|consen 588 KQLEKEMVKAGLPDIMQNQMRKMLQQKESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVR 649 (1034)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhhHHHHHHhhccccceEEEeeecccccceeEEEe
Confidence 58999999999999999999999999999999999999999999999999999999999985
No 3
>KOG0612|consensus
Probab=98.36 E-value=3.6e-07 Score=72.27 Aligned_cols=55 Identities=36% Similarity=0.496 Sum_probs=42.1
Q ss_pred hcCCCCHHHHHHHHHHHHHH-HHHHHhhhccCCCCCCCCccccccCCccceEeeec
Q psy17601 9 KDESLSETQRQEKRQQHAQK-ETEFLRLKRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~-e~~~~r~~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++..|.-.|..+.+.+... +...-.....+++.+||+++++||+|+||+|.||+
T Consensus 40 ~ec~~~~Lrr~k~i~~fl~~~kp~v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr 95 (1317)
T KOG0612|consen 40 DECDNSALRRDKNIAEFLNRYKPIVKKVKELRLKAEDFEILKVIGRGAFGEVALVR 95 (1317)
T ss_pred HHhccHHHHhhhhHHHHHHHhHHHHHHHHHHhCCHHhhHHHHHhcccccceeEEEE
Confidence 45666666776666665554 44444566778999999999999999999999986
No 4
>KOG0598|consensus
Probab=98.12 E-value=9.4e-07 Score=62.74 Aligned_cols=25 Identities=48% Similarity=0.804 Sum_probs=23.5
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+++||+++++||+|+||+|++|+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vr 45 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVR 45 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEE
Confidence 5789999999999999999999986
No 5
>KOG0616|consensus
Probab=98.00 E-value=6.7e-06 Score=58.06 Aligned_cols=44 Identities=23% Similarity=0.437 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhh----hccCCCCCCCCccccccCCccceEeeec
Q psy17601 20 EKRQQHAQKETEFLRL----KRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 20 ~~~~~~~~~e~~~~r~----~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.....+.+...+|... ..+..+++||+++++||.|+||+|+||+
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~dfe~~~tlGtGSFGrV~LVr 64 (355)
T KOG0616|consen 17 SVKEFLDKAREDFPKKWANTPQNPYSLQDFERLKTLGTGSFGRVHLVR 64 (355)
T ss_pred HHHHHHHHHHHhhhhhhcCCCCCCcchhhhhheeeeccCccceEEEEE
Confidence 3344444444444432 2223789999999999999999999997
No 6
>KOG0694|consensus
Probab=97.93 E-value=4e-06 Score=63.51 Aligned_cols=26 Identities=38% Similarity=0.677 Sum_probs=24.2
Q ss_pred cCCCCCCCCccccccCCccceEeeec
Q psy17601 38 SRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 38 ~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+++++||..+++||+|+||+|+||.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae 388 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAE 388 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEE
Confidence 47899999999999999999999985
No 7
>KOG0580|consensus
Probab=97.79 E-value=1e-05 Score=55.71 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=24.7
Q ss_pred ccCCCCCCCCccccccCCccceEeeec
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.....++||++-++||+|.||+||||+
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlar 42 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAR 42 (281)
T ss_pred ccccchhhccccccccCCccccEeEee
Confidence 346889999999999999999999997
No 8
>KOG0696|consensus
Probab=97.77 E-value=9.7e-06 Score=59.95 Aligned_cols=26 Identities=35% Similarity=0.616 Sum_probs=23.5
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+.++||+.+.+||+|+||+|+||.+
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaer 370 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAER 370 (683)
T ss_pred ceeecccceEEEeccCccceeeeecc
Confidence 56778999999999999999999964
No 9
>KOG0690|consensus
Probab=97.49 E-value=3.7e-05 Score=55.60 Aligned_cols=27 Identities=37% Similarity=0.711 Sum_probs=24.3
Q ss_pred ccCCCCCCCCccccccCCccceEeeec
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.++.++||+.+++||+|.||+|-|++
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~r 188 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCR 188 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEe
Confidence 446788999999999999999999986
No 10
>KOG0591|consensus
Probab=97.27 E-value=4.1e-05 Score=54.16 Aligned_cols=27 Identities=41% Similarity=0.598 Sum_probs=24.0
Q ss_pred cCCCCCCCCccccccCCccceEeeecC
Q psy17601 38 SRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 38 ~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+..+.||++++.||+|+||+||.|.+
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~ 40 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQC 40 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeee
Confidence 467789999999999999999999863
No 11
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.15 E-value=0.00017 Score=49.17 Aligned_cols=22 Identities=68% Similarity=0.989 Sum_probs=20.1
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+||++++.||+|+||+||+|.+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~ 22 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQK 22 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEE
Confidence 5899999999999999999863
No 12
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.14 E-value=0.00017 Score=48.82 Aligned_cols=22 Identities=59% Similarity=0.957 Sum_probs=20.0
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~ 22 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQK 22 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEE
Confidence 5899999999999999999863
No 13
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.12 E-value=0.00044 Score=47.73 Aligned_cols=35 Identities=37% Similarity=0.656 Sum_probs=27.5
Q ss_pred HHHHHhhhccCCCCCCCCccccccCCccceEeeec
Q psy17601 29 ETEFLRLKRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 29 e~~~~r~~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.............++|++++.||+|+||.||+|.
T Consensus 29 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~ 63 (370)
T cd05621 29 EKIVRKIRKLQMKAEDYDVVKVIGRGAFGEVQLVR 63 (370)
T ss_pred HHHHHHHHhcCCCHHHCeEEEEEEecCCeEEEEEE
Confidence 33333445556778999999999999999999986
No 14
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.10 E-value=0.00019 Score=49.24 Aligned_cols=22 Identities=36% Similarity=0.526 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||+||+|.+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~ 22 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACK 22 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEE
Confidence 4799999999999999999863
No 15
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.07 E-value=0.00022 Score=48.59 Aligned_cols=22 Identities=41% Similarity=0.505 Sum_probs=20.1
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~ 22 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRK 22 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEE
Confidence 5899999999999999999863
No 16
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.06 E-value=0.00022 Score=48.81 Aligned_cols=22 Identities=36% Similarity=0.507 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|++
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~ 22 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARK 22 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEE
Confidence 4699999999999999999863
No 17
>KOG1035|consensus
Probab=97.01 E-value=0.00018 Score=57.74 Aligned_cols=22 Identities=41% Similarity=0.830 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++||+.+.+||+||||.|++|+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVR 499 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVR 499 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEe
Confidence 4799999999999999999986
No 18
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.01 E-value=0.00027 Score=46.78 Aligned_cols=26 Identities=35% Similarity=0.463 Sum_probs=23.4
Q ss_pred cCCCCCCCCccccccCCccceEeeec
Q psy17601 38 SRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 38 ~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+..++|++.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~~~lg~G~~g~V~~a~ 27 (303)
T cd05088 2 PVLEWNDIKFQDVIGEGNFGQVLKAR 27 (303)
T ss_pred CccchhhceeeeeecCCCCceEEEEE
Confidence 35778899999999999999999986
No 19
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.01 E-value=0.00036 Score=48.00 Aligned_cols=29 Identities=48% Similarity=0.785 Sum_probs=25.0
Q ss_pred hccCCCCCCCCccccccCCccceEeeecC
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
....++.++|++++.||+|+||.||+|.+
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~ 64 (370)
T cd05596 36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRH 64 (370)
T ss_pred ccCCCCHHHcEEEEEEeeCCCEEEEEEEE
Confidence 44567889999999999999999999863
No 20
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.00 E-value=0.00028 Score=46.65 Aligned_cols=23 Identities=26% Similarity=0.365 Sum_probs=20.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.-..|.+.+.||+|+||.||+|.
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~ 32 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQ 32 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEE
Confidence 34679999999999999999985
No 21
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.98 E-value=0.00029 Score=47.45 Aligned_cols=22 Identities=59% Similarity=0.880 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~ 22 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKM 22 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEE
Confidence 5899999999999999999863
No 22
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.97 E-value=0.0003 Score=47.77 Aligned_cols=21 Identities=67% Similarity=1.013 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++++.||+|+||.||+|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~ 21 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQ 21 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEE
Confidence 589999999999999999986
No 23
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.97 E-value=0.00038 Score=51.33 Aligned_cols=28 Identities=36% Similarity=0.427 Sum_probs=24.5
Q ss_pred ccCCCCCCCCccccccCCccceEeeecC
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.....++|.+.+.||+|+||.||+|.+
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~ 153 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASL 153 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEE
Confidence 4566789999999999999999999863
No 24
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=96.96 E-value=0.00033 Score=47.41 Aligned_cols=23 Identities=30% Similarity=0.429 Sum_probs=20.6
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|.+.+.||+|+||.||+|.
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~ 27 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEAD 27 (343)
T ss_pred chhHhcccccccCCccceEEEEe
Confidence 44689999999999999999985
No 25
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.92 E-value=0.0005 Score=50.53 Aligned_cols=27 Identities=30% Similarity=0.501 Sum_probs=23.6
Q ss_pred ccCCCCCCCCccccccCCccceEeeec
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+++.++|.+.+.||+|+||.||.+.
T Consensus 139 ~~r~~~d~F~i~~~LG~GgFG~VYkG~ 165 (507)
T PLN03224 139 NSRWSSDDFQLRDKLGGGNFGITFEGL 165 (507)
T ss_pred CCCccccCceEeeEeecCCCeEEEEEE
Confidence 346788999999999999999999864
No 26
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.88 E-value=0.00039 Score=46.82 Aligned_cols=29 Identities=28% Similarity=0.438 Sum_probs=25.0
Q ss_pred hccCCCCCCCCccccccCCccceEeeecC
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
......+++|.+.+.||+|+||.||+|.+
T Consensus 11 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~ 39 (329)
T PTZ00263 11 DTSSWKLSDFEMGETLGTGSFGRVRIAKH 39 (329)
T ss_pred ccCCCCchheEEEEEEEecCCeEEEEEEE
Confidence 34567789999999999999999999863
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=96.86 E-value=0.0004 Score=46.46 Aligned_cols=24 Identities=29% Similarity=0.475 Sum_probs=20.9
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||.|+||.||+|.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~ 27 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEAS 27 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEE
Confidence 345789999999999999999984
No 28
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=96.86 E-value=0.00037 Score=44.58 Aligned_cols=24 Identities=21% Similarity=0.382 Sum_probs=21.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+++++|.+++.||+|+||.||+|.
T Consensus 1 ~~~~~~~~~~~lg~G~~~~vy~~~ 24 (256)
T cd05114 1 INPSELTFMKELGSGQFGVVHLGK 24 (256)
T ss_pred CCHHHcEEeeEecCCcCceEEEEE
Confidence 356889999999999999999875
No 29
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.85 E-value=0.00044 Score=46.59 Aligned_cols=21 Identities=67% Similarity=0.988 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++++.||+|+||.||+|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~ 21 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVK 21 (331)
T ss_pred CCceEEEEEEecCCeEEEEEE
Confidence 589999999999999999986
No 30
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.84 E-value=0.00059 Score=44.37 Aligned_cols=22 Identities=36% Similarity=0.635 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+|.+++.||+|+||.||+|.+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~ 22 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARD 22 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEE
Confidence 4699999999999999999863
No 31
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.83 E-value=0.0011 Score=45.77 Aligned_cols=29 Identities=48% Similarity=0.757 Sum_probs=25.0
Q ss_pred hccCCCCCCCCccccccCCccceEeeecC
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
....+..++|.+++.||+|+||.||+|.+
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~ 64 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRH 64 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEE
Confidence 34567789999999999999999999863
No 32
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.83 E-value=0.00047 Score=44.40 Aligned_cols=24 Identities=25% Similarity=0.506 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|.+++.||.|+||.||+|+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~ 25 (275)
T cd05046 2 FPRSNLQEITTLGRGEFGEVFLAK 25 (275)
T ss_pred CChHhceeeeeecccceeEEEEEE
Confidence 345899999999999999999986
No 33
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.82 E-value=0.00044 Score=47.13 Aligned_cols=27 Identities=26% Similarity=0.618 Sum_probs=23.9
Q ss_pred ccCCCCCCCCccccccCCccceEeeec
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...+..++|.+++.||+|+||.||+|.
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~ 50 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILAT 50 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEE
Confidence 346778999999999999999999985
No 34
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.81 E-value=0.00058 Score=44.97 Aligned_cols=22 Identities=36% Similarity=0.700 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~ 22 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRD 22 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEE
Confidence 5799999999999999999863
No 35
>PTZ00284 protein kinase; Provisional
Probab=96.79 E-value=0.00051 Score=48.56 Aligned_cols=23 Identities=30% Similarity=0.676 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+|.+++.||+|+||.||+|.+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~ 150 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWD 150 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEE
Confidence 46799999999999999999864
No 36
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.78 E-value=0.00059 Score=44.01 Aligned_cols=22 Identities=36% Similarity=0.687 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+||.+++.||.|+||.||+|.+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~ 22 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRH 22 (283)
T ss_pred CCceEEEEecccCCeEEEEEEE
Confidence 5899999999999999999863
No 37
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.78 E-value=0.00056 Score=46.00 Aligned_cols=21 Identities=71% Similarity=1.002 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+++.||+|+||.||++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~ 21 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVK 21 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEE
Confidence 589999999999999999985
No 38
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.76 E-value=0.00062 Score=44.68 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.5
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+++|.+++.||.|+||.||+|.+
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~ 26 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRS 26 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEE
Confidence 568899999999999999999863
No 39
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.75 E-value=0.00062 Score=44.91 Aligned_cols=23 Identities=22% Similarity=0.512 Sum_probs=20.9
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|++++.||.|+||.||+|.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~ 26 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKS 26 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEE
Confidence 47899999999999999999864
No 40
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.75 E-value=0.00071 Score=45.49 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=22.0
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+..++|++++.||+|+||.||+|.+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~ 26 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQH 26 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEE
Confidence 4568999999999999999999863
No 41
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=96.72 E-value=0.00066 Score=45.09 Aligned_cols=24 Identities=42% Similarity=0.751 Sum_probs=21.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|..++.||+|+||.||+|.
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~ 27 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGL 27 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEE
Confidence 456799999999999999999985
No 42
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.72 E-value=0.00065 Score=46.42 Aligned_cols=21 Identities=57% Similarity=0.906 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+++.||.|+||.||+|.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~ 21 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQ 21 (377)
T ss_pred CCceEeEEEeecCCEEEEEEE
Confidence 479999999999999999985
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=96.70 E-value=0.0006 Score=44.10 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=21.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.++||++++.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~ 25 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGE 25 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEE
Confidence 567899999999999999999875
No 44
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.69 E-value=0.0007 Score=48.77 Aligned_cols=22 Identities=23% Similarity=0.335 Sum_probs=19.7
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++|.+++.||+|+||+||+|.
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~ 168 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICA 168 (501)
T ss_pred hhccEEEeEecCCCCcceEEEE
Confidence 4689999999999999999864
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=96.69 E-value=0.00079 Score=44.32 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=20.8
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~ 25 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCE 25 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEE
Confidence 345789999999999999999985
No 46
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.68 E-value=0.00088 Score=46.75 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=22.8
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+...+|.+++.||+|+||.||+|+|
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d 113 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACID 113 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEE
Confidence 45667899999999999999999874
No 47
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.68 E-value=0.00069 Score=45.32 Aligned_cols=22 Identities=64% Similarity=0.918 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~ 22 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRD 22 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEE
Confidence 4799999999999999999864
No 48
>KOG0585|consensus
Probab=96.64 E-value=0.00082 Score=50.11 Aligned_cols=26 Identities=31% Similarity=0.572 Sum_probs=23.7
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+..+++|++++-||+|.||+|.||++
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~ 118 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARD 118 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEee
Confidence 45788999999999999999999985
No 49
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=96.64 E-value=0.00083 Score=43.03 Aligned_cols=24 Identities=29% Similarity=0.420 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|++++.||.|+||.||+|.
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~ 26 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGY 26 (260)
T ss_pred cchHHceeeeeeccCccceEEeee
Confidence 455789999999999999999986
No 50
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=96.63 E-value=0.001 Score=43.24 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...++|.+++.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~ 25 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCE 25 (296)
T ss_pred CchhhCcccccccCCCCccEEEEE
Confidence 345789999999999999999875
No 51
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.62 E-value=0.00081 Score=43.87 Aligned_cols=24 Identities=38% Similarity=0.678 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+++.||+|+||.||+|.
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~ 27 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGI 27 (279)
T ss_pred CCHhhceeccccCccCCcceEEEE
Confidence 456899999999999999999875
No 52
>KOG0600|consensus
Probab=96.61 E-value=0.00039 Score=51.80 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=23.3
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
....+.|+.|..||+|+||+||.|+|
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~ 138 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARD 138 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeee
Confidence 44678999999999999999999986
No 53
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=96.58 E-value=0.00089 Score=43.02 Aligned_cols=23 Identities=35% Similarity=0.384 Sum_probs=20.7
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|.+...||+|+||.||.|.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~ 24 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGR 24 (266)
T ss_pred ChHHceeeeEecCCccceEEEEE
Confidence 46789999999999999999875
No 54
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.56 E-value=0.00096 Score=45.07 Aligned_cols=24 Identities=33% Similarity=0.439 Sum_probs=21.2
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
-.++|.+++.||+|+||.||+|.+
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~ 38 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYD 38 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEe
Confidence 357899999999999999999864
No 55
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=96.52 E-value=0.0013 Score=43.55 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=21.8
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+++|.+++.||+|+||.||+|.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~Vy~~~~ 27 (309)
T cd07872 3 GKMETYIKLEKLGEGTYATVFKGRS 27 (309)
T ss_pred CCCCceEEEEEecccCCEEEEEEEe
Confidence 3568899999999999999999863
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.52 E-value=0.001 Score=44.53 Aligned_cols=22 Identities=27% Similarity=0.582 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~ 22 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKK 22 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEE
Confidence 4799999999999999999863
No 57
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.51 E-value=0.00067 Score=44.18 Aligned_cols=24 Identities=33% Similarity=0.436 Sum_probs=21.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|++++.||+|+||.||+|.
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~ 25 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVK 25 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEE
Confidence 456799999999999999999986
No 58
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=96.49 E-value=0.0012 Score=42.75 Aligned_cols=24 Identities=42% Similarity=0.685 Sum_probs=21.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|++++.||.|+||.||.|.
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~ 27 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGI 27 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEE
Confidence 467899999999999999999885
No 59
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.49 E-value=0.0012 Score=42.93 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+++|++.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~ 25 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGH 25 (283)
T ss_pred CChhhceeeeeccccCCcceEEEE
Confidence 456899999999999999999974
No 60
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.46 E-value=0.0011 Score=44.93 Aligned_cols=23 Identities=35% Similarity=0.540 Sum_probs=20.8
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|.+++.||+|+||.||+|.+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~ 42 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFD 42 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEE
Confidence 57899999999999999999864
No 61
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.46 E-value=0.0013 Score=42.66 Aligned_cols=22 Identities=41% Similarity=0.629 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~ 22 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRH 22 (287)
T ss_pred CCceEEEEecccCCEEEEEEEE
Confidence 4799999999999999999863
No 62
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.45 E-value=0.0014 Score=44.19 Aligned_cols=25 Identities=32% Similarity=0.392 Sum_probs=21.8
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+..++|++++.||.|+||.||+|.+
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~ 26 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSH 26 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEE
Confidence 3458999999999999999999863
No 63
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.45 E-value=0.0013 Score=43.24 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=22.0
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+++|.+++.||.|+||.||+|.+
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~ 27 (301)
T cd07873 3 GKLETYIKLDKLGEGTYATVYKGRS 27 (301)
T ss_pred ccccceEEeeEeccCcCEEEEEEEE
Confidence 3578999999999999999999853
No 64
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=96.44 E-value=0.0011 Score=44.93 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.|++.+.||.|+||.||+|.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~ 27 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQAS 27 (337)
T ss_pred HHhhhhcccccCcCceEEecc
Confidence 589999999999999999985
No 65
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=96.44 E-value=0.0014 Score=42.94 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=20.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|++.+.||+|+||.||+|.
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~ 25 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCE 25 (295)
T ss_pred chHhCeehhccCCCCCceEEecc
Confidence 34689999999999999999875
No 66
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.44 E-value=0.0011 Score=42.38 Aligned_cols=24 Identities=29% Similarity=0.427 Sum_probs=21.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+++.||.|+||.||+|.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~ 26 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGY 26 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEE
Confidence 467899999999999999999985
No 67
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.43 E-value=0.0012 Score=42.84 Aligned_cols=22 Identities=27% Similarity=0.647 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++++.||.|+||.||+|.+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~ 22 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLH 22 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEE
Confidence 5799999999999999999863
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=96.41 E-value=0.0013 Score=43.92 Aligned_cols=22 Identities=36% Similarity=0.723 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+++.||+|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~ 22 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVRE 22 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEE
Confidence 4799999999999999999863
No 69
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.39 E-value=0.0014 Score=46.42 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=21.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.-.++|.+...||+|+||+||+|+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~ 38 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGY 38 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEE
Confidence 345789999999999999999995
No 70
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=96.38 E-value=0.0014 Score=43.96 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+.|.+++.||+|+||.||+|.+
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~ 36 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYD 36 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEE
Confidence 46899999999999999999863
No 71
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=96.38 E-value=0.0011 Score=44.97 Aligned_cols=25 Identities=32% Similarity=0.425 Sum_probs=21.9
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+++|+.++.||.|+||.||+|.+
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~ 95 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIH 95 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEE
Confidence 4568999999999999999999863
No 72
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.36 E-value=0.0012 Score=45.43 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=20.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~ 55 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEAT 55 (375)
T ss_pred cchHHeehhheecCCccceEEEEE
Confidence 445689999999999999999874
No 73
>KOG0695|consensus
Probab=96.36 E-value=0.0011 Score=48.39 Aligned_cols=25 Identities=40% Similarity=0.755 Sum_probs=22.9
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
-+.+.||..+++||+|+|.+|.||+
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~ 270 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVR 270 (593)
T ss_pred ccccccceeeeeecCcchhhhhhee
Confidence 4678999999999999999999886
No 74
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.36 E-value=0.00076 Score=43.69 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+++++|.+++.||.|+||.||++.
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~ 25 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGH 25 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEE
Confidence 467789999999999999999975
No 75
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=96.33 E-value=0.0013 Score=42.34 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=21.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+++.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~g~~~~v~~~~ 25 (280)
T cd05049 2 VQRDTIVLKRELGEGAFGKVFLGE 25 (280)
T ss_pred CChHHhhHHhhccccCCceEeeee
Confidence 356789999999999999999985
No 76
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=96.32 E-value=0.0019 Score=41.98 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|+++++||+|+||.||+|.+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~ 22 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYH 22 (279)
T ss_pred CcchheeeeccCCCeEEEEEEE
Confidence 4799999999999999999864
No 77
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.29 E-value=0.0022 Score=42.20 Aligned_cols=21 Identities=38% Similarity=0.676 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+.++||.|+||.||+|.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~ 22 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAM 22 (297)
T ss_pred ccceeeeeecCCCcceEEEEE
Confidence 689999999999999999885
No 78
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.26 E-value=0.0018 Score=42.79 Aligned_cols=24 Identities=42% Similarity=0.681 Sum_probs=21.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|..++.||.|+||.||+|.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~ 27 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGI 27 (303)
T ss_pred cchhhceeccccccCCCccEEEEE
Confidence 456899999999999999999985
No 79
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.25 E-value=0.0016 Score=41.90 Aligned_cols=24 Identities=25% Similarity=0.511 Sum_probs=21.1
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||.|+||.||++.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~ 26 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGL 26 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEE
Confidence 456789999999999999999875
No 80
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=96.25 E-value=0.0017 Score=42.46 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=21.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~ 26 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGN 26 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEE
Confidence 456789999999999999999874
No 81
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.24 E-value=0.0019 Score=42.57 Aligned_cols=24 Identities=38% Similarity=0.666 Sum_probs=21.8
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++++|++++.||.|+||.||+|.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~ 28 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARD 28 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEE
Confidence 578999999999999999999864
No 82
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.23 E-value=0.0024 Score=42.34 Aligned_cols=21 Identities=38% Similarity=0.594 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++++.||.|+||.||+|.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~ 21 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVL 21 (308)
T ss_pred CCceEEeeccCCCCeEEEEEE
Confidence 579999999999999999985
No 83
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.23 E-value=0.0019 Score=43.87 Aligned_cols=23 Identities=35% Similarity=0.505 Sum_probs=20.8
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|.+++.||+|+||.||.|.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~ 45 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYD 45 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEE
Confidence 57999999999999999999864
No 84
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=96.23 E-value=0.002 Score=41.93 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..+||++++.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~ 25 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQAR 25 (288)
T ss_pred CChHhceecccccccccccEEEEE
Confidence 356789999999999999999985
No 85
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=96.22 E-value=0.002 Score=40.96 Aligned_cols=23 Identities=22% Similarity=0.283 Sum_probs=20.7
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+++|.+.+.||.|+||.||+|.
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~ 24 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGY 24 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEE
Confidence 46789999999999999999985
No 86
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=96.21 E-value=0.0015 Score=45.00 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=20.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|++.+.||+|+||.||+|+
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~ 58 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEAT 58 (374)
T ss_pred ccHHHceehheecCCCcccEEEEE
Confidence 345689999999999999999875
No 87
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.21 E-value=0.002 Score=45.66 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
....+|.+++.||+|+||.||+|.+
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~ 87 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAIC 87 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEE
Confidence 3446899999999999999999863
No 88
>KOG0201|consensus
Probab=96.19 E-value=0.0022 Score=47.12 Aligned_cols=22 Identities=50% Similarity=0.806 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|..+..||+|+||+||.|+|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d 34 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAID 34 (467)
T ss_pred cccccchhccccccceeeeeee
Confidence 5688889999999999999976
No 89
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=96.18 E-value=0.0016 Score=41.90 Aligned_cols=23 Identities=35% Similarity=0.406 Sum_probs=20.4
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...+|.+.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~ 24 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGR 24 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEE
Confidence 45689999999999999999875
No 90
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.14 E-value=0.0022 Score=41.08 Aligned_cols=23 Identities=26% Similarity=0.567 Sum_probs=20.7
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|++++.||+|+||.||+|.
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~ 29 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKAR 29 (267)
T ss_pred chhhcchhheeecCCCeEEEEEE
Confidence 45789999999999999999986
No 91
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=96.13 E-value=0.0022 Score=41.41 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=20.3
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+...+|.+.+.||+|+||.||+|.
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~ 25 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGC 25 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEE
Confidence 345679999999999999999873
No 92
>KOG1152|consensus
Probab=96.13 E-value=0.0027 Score=48.57 Aligned_cols=25 Identities=28% Similarity=0.578 Sum_probs=22.4
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
-+.+||..++.+|.|+||+|.||++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~ 582 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIH 582 (772)
T ss_pred cccccceeeeeccccccceEEEeee
Confidence 3678999999999999999999974
No 93
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=96.11 E-value=0.0028 Score=41.04 Aligned_cols=25 Identities=24% Similarity=0.545 Sum_probs=21.7
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...++|++++.||+|+||.||+|.+
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~ 39 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLN 39 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEE
Confidence 3557999999999999999999853
No 94
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=96.09 E-value=0.0024 Score=40.86 Aligned_cols=24 Identities=29% Similarity=0.476 Sum_probs=21.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|++++.||+|+||.||+|.
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~ 26 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGT 26 (260)
T ss_pred CchHHhhhhheeccccCceEEEEE
Confidence 345789999999999999999885
No 95
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=96.04 E-value=0.0031 Score=40.33 Aligned_cols=22 Identities=36% Similarity=0.608 Sum_probs=20.1
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+++|.+.+.||.|+||.||+|.
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~ 22 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRAT 22 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEE
Confidence 4789999999999999999985
No 96
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.02 E-value=0.0029 Score=41.50 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=19.0
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+.+.||.|+||.||+|.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~ 25 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCE 25 (296)
T ss_pred hhceeeeeccCCCCCeEEecc
Confidence 579999999999999999874
No 97
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=96.02 E-value=0.002 Score=41.88 Aligned_cols=23 Identities=48% Similarity=0.758 Sum_probs=20.4
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+||+.+..||+|+||.||++.
T Consensus 2 ~~~~~~~~~~lg~G~~g~vy~~~ 24 (288)
T cd06616 2 TAEDLKDLGEIGRGAFGTVNKML 24 (288)
T ss_pred cHHHhHHHHHhCCCCceEEEEEE
Confidence 45789999999999999999875
No 98
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.01 E-value=0.0019 Score=42.63 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=21.6
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..++|.+.+.||+|+||.||+|.
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~ 38 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAE 38 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeE
Confidence 4455889999999999999999885
No 99
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.01 E-value=0.0029 Score=40.45 Aligned_cols=22 Identities=36% Similarity=0.588 Sum_probs=20.1
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+++|.+.+.||+|+||.||+|.
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~ 22 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRAT 22 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEe
Confidence 4689999999999999999986
No 100
>KOG1164|consensus
Probab=95.95 E-value=0.0032 Score=42.86 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=19.6
Q ss_pred CCCccccccCCccceEeeecC
Q psy17601 44 DFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~~ 64 (64)
.|.+.+.||.|+||.||+|.+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~ 39 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSD 39 (322)
T ss_pred ceEEeeeccccCCceEEEEEe
Confidence 899999999999999999864
No 101
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.94 E-value=0.0035 Score=42.78 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=20.8
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+|.+++.||.|+||.||+|.+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~ 87 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATK 87 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEE
Confidence 345799999999999999999863
No 102
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=95.90 E-value=0.0036 Score=40.70 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=21.4
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+++|.+++.||.|+||.||+|.+
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~ 26 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRS 26 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEE
Confidence 468999999999999999999863
No 103
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.90 E-value=0.0031 Score=40.92 Aligned_cols=24 Identities=29% Similarity=0.595 Sum_probs=21.1
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~ 26 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGL 26 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEE
Confidence 455789999999999999999885
No 104
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=95.89 E-value=0.0032 Score=40.29 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=20.5
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...+|.+.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~ 24 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGK 24 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeE
Confidence 45689999999999999999975
No 105
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=95.89 E-value=0.0027 Score=40.80 Aligned_cols=23 Identities=30% Similarity=0.421 Sum_probs=20.7
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+||.+++.||.|+||.||+|.
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~ 24 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGK 24 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEE
Confidence 56789999999999999999985
No 106
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=95.89 E-value=0.0029 Score=40.54 Aligned_cols=24 Identities=38% Similarity=0.571 Sum_probs=21.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|...+.||+|+||.||+|.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~ 25 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGI 25 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEE
Confidence 456789999999999999999885
No 107
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=95.87 E-value=0.0035 Score=40.97 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=21.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++..+|.+.+.||+|+||+||+|.
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~ 25 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAE 25 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeE
Confidence 456789999999999999999875
No 108
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=95.87 E-value=0.0035 Score=46.86 Aligned_cols=24 Identities=38% Similarity=0.559 Sum_probs=21.5
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+++|.+++.||.|+||.||+|.+
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~ 25 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRK 25 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEE
Confidence 468899999999999999999864
No 109
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=95.85 E-value=0.0045 Score=39.72 Aligned_cols=23 Identities=30% Similarity=0.472 Sum_probs=20.2
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|.+.+.||+|+||.||++.+
T Consensus 1 ~~~~~~~~~l~~g~~g~v~~~~~ 23 (265)
T cd06652 1 PTNWRLGKLLGQGAFGRVYLCYD 23 (265)
T ss_pred CCcceEeeEEecCCceEEEEEEE
Confidence 36899999999999999999863
No 110
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=95.84 E-value=0.0043 Score=40.31 Aligned_cols=22 Identities=36% Similarity=0.714 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++.+.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~ 22 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARD 22 (295)
T ss_pred CCceEeeEecccCCeEEEEEEE
Confidence 4699999999999999999863
No 111
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=95.82 E-value=0.0048 Score=39.30 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=21.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|++.+.||.|+||.||+|.
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~ 26 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGD 26 (256)
T ss_pred cChhhccceeeeecCCCceEEEEE
Confidence 456799999999999999999885
No 112
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=95.82 E-value=0.0039 Score=39.89 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=21.1
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~ 26 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGL 26 (261)
T ss_pred cchhheeeEEEecccCCccEEEEE
Confidence 355789999999999999999875
No 113
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=95.81 E-value=0.0047 Score=40.20 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=21.1
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|.....||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~ 25 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAE 25 (280)
T ss_pred CChHhceeccccCCccCCeEEEeE
Confidence 566789999999999999999874
No 114
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=95.81 E-value=0.0039 Score=40.63 Aligned_cols=23 Identities=39% Similarity=0.647 Sum_probs=21.1
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+++|.+++.||.|+||.||+|.
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~ 28 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKAR 28 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEE
Confidence 36899999999999999999986
No 115
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=95.80 E-value=0.0047 Score=39.62 Aligned_cols=24 Identities=29% Similarity=0.389 Sum_probs=21.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~ 26 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMAT 26 (260)
T ss_pred ccccceeEEeEecCccceEEEEEE
Confidence 346789999999999999999985
No 116
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=95.79 E-value=0.0044 Score=39.50 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||.|+||.||+|.
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~ 26 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGT 26 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEE
Confidence 456889999999999999999875
No 117
>KOG0610|consensus
Probab=95.79 E-value=0.0023 Score=46.90 Aligned_cols=29 Identities=31% Similarity=0.392 Sum_probs=25.3
Q ss_pred hccCCCCCCCCccccccCCccceEeeecC
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+...+++++|+.++.||+|.-|.||||.+
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l 98 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVEL 98 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEe
Confidence 34567889999999999999999999963
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.78 E-value=0.0043 Score=44.80 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=22.1
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+...++|.+.+.||+|+||.||+|.+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~ 53 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKR 53 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEE
Confidence 34457999999999999999999863
No 119
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.75 E-value=0.0024 Score=40.69 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=20.8
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+|.+++.||.|+||.||+|.+
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~ 27 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLW 27 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEe
Confidence 346899999999999999999863
No 120
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=95.75 E-value=0.0037 Score=40.21 Aligned_cols=23 Identities=35% Similarity=0.449 Sum_probs=20.4
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.+|.+.+.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~ 24 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGR 24 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEE
Confidence 46788999999999999999875
No 121
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.75 E-value=0.0031 Score=41.50 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=22.1
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..++|.+.+.||.|+||.||+|.
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~ 35 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAE 35 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEE
Confidence 4667899999999999999999884
No 122
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=95.74 E-value=0.0033 Score=40.88 Aligned_cols=25 Identities=32% Similarity=0.430 Sum_probs=21.6
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..++|.+++.||+|+||.||++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~ 32 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAE 32 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEE
Confidence 3456789999999999999999875
No 123
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=95.73 E-value=0.0042 Score=39.66 Aligned_cols=24 Identities=29% Similarity=0.599 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|.+.+.||+|+||.||++.
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~ 26 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGD 26 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEE
Confidence 456799999999999999999874
No 124
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=95.72 E-value=0.0038 Score=40.39 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|++.+.||+|+||.||+|.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~ 26 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGI 26 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEE
Confidence 45789999999999999999874
No 125
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=95.72 E-value=0.0051 Score=43.24 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=21.5
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..+.|.+.+.||.|+||.||.|.
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~ 57 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGT 57 (400)
T ss_pred eccccceehhheecCCCCceEEEEE
Confidence 4556889999999999999999874
No 126
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.70 E-value=0.0036 Score=41.93 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=19.5
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+|.+.+.||+|+||.||+|.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~ 32 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAE 32 (334)
T ss_pred HhHeeecceeccccCCcEEEEE
Confidence 3578999999999999999985
No 127
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=95.69 E-value=0.0042 Score=40.24 Aligned_cols=24 Identities=42% Similarity=0.720 Sum_probs=20.9
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+++.||.|+||.||+|.
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~ 27 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGV 27 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEE
Confidence 345789999999999999999875
No 128
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=95.69 E-value=0.0058 Score=39.22 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=20.2
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|.+++.||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~ig~g~~~~v~~~~ 24 (284)
T cd05038 2 EKRHLKFIKQLGEGHFGKVELCR 24 (284)
T ss_pred chhhchhheeeccCCCeeEEEee
Confidence 34689999999999999999985
No 129
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=95.69 E-value=0.0043 Score=40.36 Aligned_cols=24 Identities=42% Similarity=0.650 Sum_probs=21.0
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+++|.+++.||.|+||.||+|.+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~ 33 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARH 33 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEE
Confidence 357899999999999999999863
No 130
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=95.64 E-value=0.0036 Score=44.09 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=20.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~ 57 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEAT 57 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEE
Confidence 445678889999999999999985
No 131
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=95.61 E-value=0.0048 Score=48.98 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=22.8
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+++|.+++.||.|+||.||+|.+
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkd 34 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKH 34 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEE
Confidence 45568999999999999999999864
No 132
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=95.60 E-value=0.006 Score=39.38 Aligned_cols=22 Identities=32% Similarity=0.613 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++++.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~ 22 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKH 22 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEE
Confidence 4689999999999999999863
No 133
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=95.60 E-value=0.006 Score=39.99 Aligned_cols=25 Identities=32% Similarity=0.434 Sum_probs=22.9
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..++|.+.+.||.|+||.||+|.
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~ 35 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMR 35 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEE
Confidence 5678999999999999999999986
No 134
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=95.55 E-value=0.005 Score=40.12 Aligned_cols=22 Identities=23% Similarity=0.477 Sum_probs=20.1
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++|.+++.||.|+||.||+|.
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~ 25 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGI 25 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEE
Confidence 4789999999999999999985
No 135
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=95.53 E-value=0.0051 Score=39.64 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=20.7
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+|.+.+.||.|+||.||+|.+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~ 27 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTW 27 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEe
Confidence 446799999999999999999853
No 136
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=95.52 E-value=0.0071 Score=38.64 Aligned_cols=22 Identities=32% Similarity=0.546 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+.+.||.|+||.||.|.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~ 22 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKE 22 (280)
T ss_pred CCceEeeeecCCCceEEEEEEE
Confidence 4799999999999999999863
No 137
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=95.52 E-value=0.0073 Score=38.33 Aligned_cols=21 Identities=38% Similarity=0.561 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++.+.||.|+||.||.|.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~ 21 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAI 21 (267)
T ss_pred CcceeeeeecCCCCeEEEEEE
Confidence 589999999999999999885
No 138
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=95.50 E-value=0.0045 Score=39.50 Aligned_cols=23 Identities=22% Similarity=0.443 Sum_probs=20.4
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++++|.+.+.||+|+||.||++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~ 26 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE 26 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc
Confidence 56789999999999999999864
No 139
>KOG0659|consensus
Probab=95.42 E-value=0.0058 Score=42.95 Aligned_cols=22 Identities=32% Similarity=0.649 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.|..++.||.|+||.||+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d 23 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARD 23 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEe
Confidence 4688899999999999999986
No 140
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=95.42 E-value=0.006 Score=39.82 Aligned_cols=21 Identities=38% Similarity=0.566 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.|++++.||.|+||.||+|.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~ 32 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAK 32 (292)
T ss_pred hhhhhhheecCCCCeEEEEEE
Confidence 669999999999999999985
No 141
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=95.41 E-value=0.0062 Score=39.35 Aligned_cols=24 Identities=17% Similarity=0.290 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+..+||+|+||.||.|.
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~ 26 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGI 26 (280)
T ss_pred cchhheEEeeeecccCCceEEEEE
Confidence 456789999999999999999885
No 142
>KOG0592|consensus
Probab=95.40 E-value=0.0077 Score=45.43 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=24.0
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+..+.||.+.++||.|+|.+|++|.+
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~ 94 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLARE 94 (604)
T ss_pred cCChhhcchhheeccccceeEEEeee
Confidence 67789999999999999999999974
No 143
>PHA03207 serine/threonine kinase US3; Provisional
Probab=95.40 E-value=0.0071 Score=41.84 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=19.0
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+|.+++.||.|+||.||+|.
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~ 112 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCT 112 (392)
T ss_pred CceEEEEeecCCCCeEEEEEE
Confidence 469999999999999999974
No 144
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=95.38 E-value=0.008 Score=39.10 Aligned_cols=20 Identities=20% Similarity=0.385 Sum_probs=17.9
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.|.+++.||+|+||.||+|.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~ 24 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCR 24 (284)
T ss_pred hhhhceecCCCCceeEEEEE
Confidence 47889999999999999885
No 145
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=95.36 E-value=0.009 Score=38.67 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=18.8
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+|.+++.||.|+||.||.|.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~ 24 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCR 24 (284)
T ss_pred ccceeeeeccCCCCceEEEEE
Confidence 478999999999999999874
No 146
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.35 E-value=0.0088 Score=38.41 Aligned_cols=22 Identities=41% Similarity=0.590 Sum_probs=19.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+|.+.+.||+|+||.||+|.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~ 23 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYD 23 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEE
Confidence 5799999999999999999863
No 147
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=95.34 E-value=0.0049 Score=40.86 Aligned_cols=25 Identities=24% Similarity=0.403 Sum_probs=21.7
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+...++|.+.+.||+|+||.||+|.
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~ 55 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEAT 55 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEE
Confidence 4566799999999999999999874
No 148
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.33 E-value=0.0073 Score=40.85 Aligned_cols=23 Identities=35% Similarity=0.505 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+|.+++.||+|+||.||+|.+
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~ 37 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYD 37 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEE
Confidence 46799999999999999999863
No 149
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=95.27 E-value=0.0066 Score=39.54 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=21.5
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+++|++.+.||.|+||.||+|.
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~ 27 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKAR 27 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEE
Confidence 356899999999999999999986
No 150
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=95.27 E-value=0.01 Score=38.12 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
-+|...+.||.|+||.||+|.+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~ 23 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYD 23 (266)
T ss_pred CCccccceecCCCCEEEEEEEE
Confidence 4799999999999999999863
No 151
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=95.26 E-value=0.007 Score=40.60 Aligned_cols=22 Identities=27% Similarity=0.519 Sum_probs=20.0
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.+.+.||.|+||.||+|.+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~ 26 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATH 26 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEE
Confidence 6899999999999999999863
No 152
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=95.24 E-value=0.0045 Score=39.68 Aligned_cols=25 Identities=36% Similarity=0.591 Sum_probs=21.3
Q ss_pred CCCCCCCccccccCCccceEeeecC
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...++|.+.+.||+|+||.||+|.+
T Consensus 6 ~~~~~~~~~~~lg~g~~~~v~~~~~ 30 (267)
T cd06645 6 NPQEDFELIQRIGSGTYGDVYKARN 30 (267)
T ss_pred CcHHHHHHHHHhCCCCCeEEEEEEE
Confidence 3446899999999999999999863
No 153
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=95.23 E-value=0.0077 Score=38.35 Aligned_cols=21 Identities=33% Similarity=0.518 Sum_probs=19.2
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|+..+.||.|+||.||+|.
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~ 21 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVL 21 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEE
Confidence 479999999999999999985
No 154
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=95.21 E-value=0.0073 Score=39.48 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=21.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+...+|.+...||+|+||.||+|.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~ 25 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAE 25 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeE
Confidence 456789999999999999999985
No 155
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=95.20 E-value=0.007 Score=39.43 Aligned_cols=24 Identities=29% Similarity=0.587 Sum_probs=21.0
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++++|++++.||.|+||.||+|.+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~ 26 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARD 26 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEE
Confidence 357899999999999999999863
No 156
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=95.19 E-value=0.0095 Score=38.33 Aligned_cols=22 Identities=36% Similarity=0.599 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.|++++.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~ 22 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRN 22 (286)
T ss_pred CceeeeeeecccCCeEEEEEEE
Confidence 4689999999999999999863
No 157
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.19 E-value=0.0095 Score=39.29 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|+.++.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~ 22 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRL 22 (316)
T ss_pred CceEEeeeecCCccEEEEEEEE
Confidence 4799999999999999999863
No 158
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.18 E-value=0.0082 Score=40.63 Aligned_cols=24 Identities=29% Similarity=0.537 Sum_probs=20.9
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..++|.+++.||+|+||.||+|.+
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~ 38 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFD 38 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEE
Confidence 347899999999999999999863
No 159
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=95.18 E-value=0.011 Score=38.54 Aligned_cols=23 Identities=30% Similarity=0.647 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+++|+++..||+|+||.||+|.+
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~ 23 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARD 23 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEe
Confidence 46899999999999999999863
No 160
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=95.17 E-value=0.0086 Score=40.50 Aligned_cols=22 Identities=27% Similarity=0.616 Sum_probs=19.8
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.|.+++.||.|+||.||+|.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~ 35 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSAL 35 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEE
Confidence 3679999999999999999986
No 161
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=95.17 E-value=0.0097 Score=39.24 Aligned_cols=21 Identities=43% Similarity=0.681 Sum_probs=19.2
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++++.||.|+||.||+|.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~ 21 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVR 21 (305)
T ss_pred CCceEeeEeecCCCeeEEEEE
Confidence 479999999999999999885
No 162
>KOG0663|consensus
Probab=95.14 E-value=0.0054 Score=44.34 Aligned_cols=24 Identities=38% Similarity=0.630 Sum_probs=22.2
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+++.|+.+..|+.|+||.||-|+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakd 97 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKD 97 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEecc
Confidence 568999999999999999999986
No 163
>KOG0589|consensus
Probab=95.13 E-value=0.0056 Score=44.61 Aligned_cols=22 Identities=36% Similarity=0.724 Sum_probs=20.2
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+++|+.++.||+|+||.++|++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvr 24 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVR 24 (426)
T ss_pred cchhhhhhhcCccccchhhhhh
Confidence 5789999999999999999875
No 164
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=95.09 E-value=0.012 Score=37.45 Aligned_cols=21 Identities=38% Similarity=0.550 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+.+.||.|+||.||+|.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~ 22 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAI 22 (267)
T ss_pred CceeeeeeeccCCceEEEEEE
Confidence 579999999999999999985
No 165
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.09 E-value=0.0095 Score=46.94 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=20.4
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.+|++++.||+|+||.||+|.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d 23 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYD 23 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEE
Confidence 36899999999999999999863
No 166
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=95.09 E-value=0.0099 Score=40.12 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|.+++.||.|+||.||+|.+
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~ 26 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVD 26 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEE
Confidence 5799999999999999999863
No 167
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.07 E-value=0.0072 Score=40.09 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=20.9
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..++|.+.+.||+|+||.||+|.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~ 32 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAE 32 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEee
Confidence 445789999999999999999974
No 168
>KOG0667|consensus
Probab=95.05 E-value=0.0084 Score=45.27 Aligned_cols=21 Identities=43% Similarity=0.877 Sum_probs=18.0
Q ss_pred CCCccccccCCccceEeeecC
Q psy17601 44 DFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~~ 64 (64)
.|+++.+||+|+||+|..|.|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d 207 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYD 207 (586)
T ss_pred EEEEEEEecccccceeEEEEe
Confidence 457788999999999998865
No 169
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=95.03 E-value=0.0097 Score=38.24 Aligned_cols=24 Identities=29% Similarity=0.544 Sum_probs=20.7
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.++|.+.+.||.|+||.||+|.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~ 26 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGV 26 (270)
T ss_pred echhhceeeeeeCCccceeEEEEE
Confidence 345678999999999999999985
No 170
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=95.01 E-value=0.011 Score=37.36 Aligned_cols=22 Identities=36% Similarity=0.530 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++.+.||.|+||.||+|.+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~ 22 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRH 22 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEE
Confidence 4799999999999999999863
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=94.98 E-value=0.011 Score=38.57 Aligned_cols=22 Identities=36% Similarity=0.650 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|.++..||.|+||.||+|.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~ 22 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRH 22 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEE
Confidence 4789999999999999999863
No 172
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=94.97 E-value=0.015 Score=36.96 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|.+.++||.|+||.||+|.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~ 22 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCY 22 (263)
T ss_pred CcccccceecCCCceEEEEEE
Confidence 579999999999999999985
No 173
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=94.97 E-value=0.011 Score=38.50 Aligned_cols=22 Identities=32% Similarity=0.294 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|+.++.||.|+||.||+|.+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~ 22 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRL 22 (287)
T ss_pred CceEEEEEeccCCceEEEEEEE
Confidence 4789999999999999999864
No 174
>KOG0595|consensus
Probab=94.95 E-value=0.013 Score=42.72 Aligned_cols=23 Identities=35% Similarity=0.427 Sum_probs=21.0
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.+|...+-||.|+||.||.|+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~ 30 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGR 30 (429)
T ss_pred ccccceehhhccCcceEEEEEeE
Confidence 46899999999999999999986
No 175
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=94.88 E-value=0.011 Score=38.31 Aligned_cols=20 Identities=50% Similarity=0.772 Sum_probs=17.8
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
-|..++.||.|+||.||++.
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~ 24 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGI 24 (277)
T ss_pred hhhhheeEeecCCeEEEEEE
Confidence 47788999999999999985
No 176
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=94.87 E-value=0.013 Score=38.60 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=14.2
Q ss_pred cccccCCccceEeeec
Q psy17601 48 LKVIGRGAFGECPKKI 63 (64)
Q Consensus 48 ~~~iG~G~fG~V~La~ 63 (64)
.+.||+|+||.||+|.
T Consensus 6 ~~~lG~G~~g~Vy~~~ 21 (317)
T cd07868 6 GCKVGRGTYGHVYKAK 21 (317)
T ss_pred ccccccCCCeEEEEEE
Confidence 4679999999999986
No 177
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=94.84 E-value=0.014 Score=39.27 Aligned_cols=22 Identities=36% Similarity=0.688 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|.+++.||+|+||.||+|.+
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~ 26 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKN 26 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEe
Confidence 4689999999999999999863
No 178
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=94.83 E-value=0.0098 Score=38.17 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=20.9
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+...+|.+.+.||.|+||.||+|.
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~ 26 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGV 26 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEE
Confidence 345789999999999999999986
No 179
>KOG0986|consensus
Probab=94.82 E-value=0.013 Score=43.90 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=22.7
Q ss_pred ccCCCCCCCCccccccCCccceEeee
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La 62 (64)
...+..++|..-++||+|+||+|+-+
T Consensus 179 ~qpvt~n~F~~~RvlGkGGFGEV~ac 204 (591)
T KOG0986|consen 179 LQPVTKNTFRVYRVLGKGGFGEVCAC 204 (591)
T ss_pred hhhccccceeeeEEEecccccceeEE
Confidence 35678899999999999999999854
No 180
>KOG0666|consensus
Probab=94.79 E-value=0.011 Score=42.72 Aligned_cols=22 Identities=32% Similarity=0.696 Sum_probs=19.9
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..|+.+.-||+|+||.||+|.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~ 44 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAV 44 (438)
T ss_pred HHHhhccceecccccceeeEee
Confidence 4679999999999999999984
No 181
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=94.77 E-value=0.0096 Score=38.13 Aligned_cols=21 Identities=29% Similarity=0.567 Sum_probs=18.7
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
..|.+.+.||+|+||.||+|.
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~ 26 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGR 26 (272)
T ss_pred hhhhHHHheeecCCeEEEEEE
Confidence 458889999999999999885
No 182
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=94.74 E-value=0.013 Score=39.40 Aligned_cols=23 Identities=30% Similarity=0.486 Sum_probs=20.3
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|.+++.||.|+||.||+|.+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~ 31 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARD 31 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEE
Confidence 46799999999999999999863
No 183
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=94.73 E-value=0.013 Score=37.67 Aligned_cols=22 Identities=55% Similarity=0.848 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++++.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~ 22 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAID 22 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEE
Confidence 4789999999999999999863
No 184
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=94.72 E-value=0.015 Score=36.91 Aligned_cols=23 Identities=35% Similarity=0.564 Sum_probs=20.7
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|++++.||.|+||.||+|.+
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~ 27 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARH 27 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEE
Confidence 47899999999999999999863
No 185
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=94.67 E-value=0.014 Score=37.80 Aligned_cols=24 Identities=29% Similarity=0.504 Sum_probs=20.8
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
....|++.+.||.|+||.||+|.+
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~ 37 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRH 37 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEE
Confidence 447899999999999999999863
No 186
>KOG0597|consensus
Probab=94.67 E-value=0.013 Score=44.96 Aligned_cols=23 Identities=30% Similarity=0.603 Sum_probs=20.4
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+++|.+...||+|+||.||.+++
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrr 23 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRR 23 (808)
T ss_pred CcchhHHHHhcCCccceeeeccc
Confidence 36899999999999999999874
No 187
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.67 E-value=0.014 Score=38.43 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=19.7
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+|.+++.||.|+||.||+|.
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~ 39 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAI 39 (297)
T ss_pred hhceeeeeeccCCCeEEEEEE
Confidence 789999999999999999985
No 188
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=94.64 E-value=0.018 Score=37.31 Aligned_cols=18 Identities=28% Similarity=0.706 Sum_probs=16.1
Q ss_pred CCccccccCCccceEeee
Q psy17601 45 FEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La 62 (64)
|.+++.||+|+||.||++
T Consensus 6 ~~~~~~lg~g~~g~v~~~ 23 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLY 23 (283)
T ss_pred ceeceecccCCCcEEEEe
Confidence 488999999999999875
No 189
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=94.62 E-value=0.016 Score=36.68 Aligned_cols=21 Identities=38% Similarity=0.735 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++.+.||.|+||.||+|.
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~ 23 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKAR 23 (262)
T ss_pred cceEEEEEecCCCceEEEEeE
Confidence 689999999999999999986
No 190
>KOG0661|consensus
Probab=94.55 E-value=0.0085 Score=44.68 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=20.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+.|.+++-||.|+||.||||.
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~ 30 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAK 30 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEee
Confidence 34678999999999999999985
No 191
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=94.54 E-value=0.019 Score=37.40 Aligned_cols=22 Identities=27% Similarity=0.644 Sum_probs=20.2
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++|.++..||.|+||.||+|.
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~ 42 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVT 42 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEE
Confidence 5789999999999999999985
No 192
>KOG0198|consensus
Probab=94.54 E-value=0.018 Score=40.35 Aligned_cols=22 Identities=27% Similarity=0.587 Sum_probs=19.4
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++...+.||+|+||.|+++.
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~ 37 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLAT 37 (313)
T ss_pred cchhhhhccccCccceEEEEEE
Confidence 4568889999999999999985
No 193
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=94.52 E-value=0.01 Score=38.31 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=19.5
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++++.||.|+||.||+|.
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~ 25 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQ 25 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEE
Confidence 679999999999999999985
No 194
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=94.50 E-value=0.018 Score=37.89 Aligned_cols=22 Identities=27% Similarity=0.471 Sum_probs=20.0
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.|.+++.||.|+||.||++.
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~ 39 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAI 39 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEE
Confidence 4689999999999999999985
No 195
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=94.45 E-value=0.02 Score=36.89 Aligned_cols=22 Identities=36% Similarity=0.628 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++.+.||.|+||.||+|.+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~ 22 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRN 22 (288)
T ss_pred CceeEEEEecccCCeeEEEEEe
Confidence 3689999999999999999863
No 196
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=94.41 E-value=0.019 Score=38.46 Aligned_cols=22 Identities=36% Similarity=0.759 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++|++.+.||.|+||.||+|.+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~ 26 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAID 26 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEE
Confidence 6899999999999999998853
No 197
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=94.24 E-value=0.017 Score=37.42 Aligned_cols=22 Identities=55% Similarity=0.822 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|..++.||.|+||.||+|.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~ 25 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGID 25 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEE
Confidence 4688999999999999999863
No 198
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=94.22 E-value=0.021 Score=38.51 Aligned_cols=22 Identities=41% Similarity=0.759 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.|.+...||.|+||.||+|.+
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~ 36 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAID 36 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEe
Confidence 5799999999999999999863
No 199
>KOG0583|consensus
Probab=94.20 E-value=0.026 Score=39.86 Aligned_cols=24 Identities=25% Similarity=0.534 Sum_probs=21.4
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.....|.+.+.||.|+||+|++|.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~ 37 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAK 37 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEee
Confidence 456789999999999999999985
No 200
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=94.14 E-value=0.02 Score=36.70 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=20.0
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..++|.+...||.|+||.||+|.
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~ 26 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGT 26 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEE
Confidence 44678899999999999999985
No 201
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=94.13 E-value=0.016 Score=38.81 Aligned_cols=23 Identities=39% Similarity=0.713 Sum_probs=20.5
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|.+.+.||.|+||.||+|.+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~ 28 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAID 28 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEE
Confidence 46899999999999999999864
No 202
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=94.09 E-value=0.023 Score=36.57 Aligned_cols=20 Identities=35% Similarity=0.688 Sum_probs=18.2
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.|+.++.||.|+||.||+|.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~ 21 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGK 21 (277)
T ss_pred hhhhhhheeccCCceEEEEE
Confidence 58889999999999999986
No 203
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.07 E-value=0.026 Score=37.20 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.9
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+|.+++.||.|+||.||++.
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~ 40 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAM 40 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEE
Confidence 3689999999999999999986
No 204
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.06 E-value=0.024 Score=40.90 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=20.1
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...|.+.+.||+|+||.||+|.+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~ 190 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSH 190 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEE
Confidence 34799999999999999999864
No 205
>KOG0593|consensus
Probab=94.03 E-value=0.024 Score=40.75 Aligned_cols=23 Identities=30% Similarity=0.586 Sum_probs=20.1
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
++.|+.+..+|.||||.||.++.
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrn 23 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRN 23 (396)
T ss_pred CcHHhhhhccccCcceEEEEecc
Confidence 35799999999999999999863
No 206
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=94.02 E-value=0.027 Score=35.57 Aligned_cols=21 Identities=38% Similarity=0.705 Sum_probs=19.4
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|++.+.||.|+||.||+|.
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~ 23 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAI 23 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEE
Confidence 689999999999999999885
No 207
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=93.97 E-value=0.044 Score=36.11 Aligned_cols=22 Identities=32% Similarity=0.449 Sum_probs=19.4
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...|..++.||+|+||.||+|.
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~ 35 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFAR 35 (307)
T ss_pred chhhhhheeecCCCCeEEEEEE
Confidence 3569999999999999999985
No 208
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=93.92 E-value=0.028 Score=36.91 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=13.5
Q ss_pred ccccCCccceEeeec
Q psy17601 49 KVIGRGAFGECPKKI 63 (64)
Q Consensus 49 ~~iG~G~fG~V~La~ 63 (64)
+.||+|+||.||+|.
T Consensus 7 ~~lG~G~~g~Vy~~~ 21 (317)
T cd07867 7 CKVGRGTYGHVYKAK 21 (317)
T ss_pred eEeccCCCeeEEEEE
Confidence 569999999999986
No 209
>KOG0658|consensus
Probab=93.92 E-value=0.022 Score=40.94 Aligned_cols=20 Identities=30% Similarity=0.692 Sum_probs=17.8
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.|...++||.|+||.||.|.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~ 44 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAK 44 (364)
T ss_pred EEEeeEEEeecccceEEEEE
Confidence 47788999999999999985
No 210
>KOG1163|consensus
Probab=93.91 E-value=0.022 Score=40.05 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=20.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
-...|.+++-||.|+||.+|+++
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~ 35 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGI 35 (341)
T ss_pred eccceEEEEeecCCchhheeeee
Confidence 44679999999999999999985
No 211
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=93.82 E-value=0.028 Score=37.96 Aligned_cols=24 Identities=25% Similarity=0.552 Sum_probs=20.9
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..++|.+++.||.|+||.||+|++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~ 36 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFD 36 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEE
Confidence 357899999999999999999863
No 212
>KOG0614|consensus
Probab=93.74 E-value=0.069 Score=40.78 Aligned_cols=28 Identities=18% Similarity=0.415 Sum_probs=25.0
Q ss_pred hccCCCCCCCCccccccCCccceEeeec
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
..+++.++|++++..||-|+||+|=|+.
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~ 440 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVK 440 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEE
Confidence 4568899999999999999999998874
No 213
>KOG0615|consensus
Probab=93.70 E-value=0.028 Score=41.42 Aligned_cols=22 Identities=27% Similarity=0.362 Sum_probs=18.4
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.|.+.+.+|.|+||.|.||+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~ 192 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAY 192 (475)
T ss_pred cceeEeeeeecCCceeEEEEEE
Confidence 3556667799999999999996
No 214
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=93.50 E-value=0.025 Score=36.60 Aligned_cols=20 Identities=35% Similarity=0.622 Sum_probs=17.4
Q ss_pred CCccccccCCccceEeeecC
Q psy17601 45 FEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~~ 64 (64)
|++++.||.|+||.||++.+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~ 26 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQN 26 (282)
T ss_pred HHHHhhcccCCCeEEEEEEE
Confidence 47889999999999998853
No 215
>KOG0594|consensus
Probab=93.50 E-value=0.017 Score=40.93 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=20.3
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.++|+.+..||.|+||.||.|++
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~ 32 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARS 32 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEE
Confidence 56788899999999999999874
No 216
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=93.49 E-value=0.041 Score=35.29 Aligned_cols=19 Identities=21% Similarity=0.518 Sum_probs=16.7
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
|.+.+.||.|+||+||+|.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~ 21 (272)
T cd06629 3 WVKGELIGKGTYGRVYLAL 21 (272)
T ss_pred eeecceecccCceEEEEEe
Confidence 5667899999999999985
No 217
>KOG1151|consensus
Probab=93.48 E-value=0.024 Score=42.84 Aligned_cols=22 Identities=36% Similarity=0.703 Sum_probs=18.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.|-.+.+||+|+|.+||.|+|
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFD 484 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFD 484 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcc
Confidence 4566788999999999999986
No 218
>KOG0576|consensus
Probab=93.35 E-value=0.026 Score=43.77 Aligned_cols=23 Identities=35% Similarity=0.709 Sum_probs=21.6
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+||+.+..+|.|+||.||.|+|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd 36 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARD 36 (829)
T ss_pred ccchhheeeecCCcccchhhhcc
Confidence 48999999999999999999986
No 219
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=93.12 E-value=0.043 Score=35.65 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=16.7
Q ss_pred CCCCccccc--cCCccceEeeec
Q psy17601 43 EDFEPLKVI--GRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~i--G~G~fG~V~La~ 63 (64)
++|++++.+ |.|+||.||++.
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~ 36 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLK 36 (267)
T ss_pred HhhccccceeecCCCceEEEEEE
Confidence 456666655 999999999985
No 220
>KOG0611|consensus
Probab=92.97 E-value=0.028 Score=42.04 Aligned_cols=22 Identities=18% Similarity=0.564 Sum_probs=19.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
-.|++...||+|+||+|.+|++
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e 74 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYE 74 (668)
T ss_pred hHHHHHHHhcCCcccceeehhh
Confidence 4799999999999999999974
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=92.96 E-value=0.066 Score=34.31 Aligned_cols=24 Identities=21% Similarity=0.353 Sum_probs=19.2
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+.+.....||+|+||.||.|.+
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~ 29 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARD 29 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEe
Confidence 445666677999999999999863
No 222
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=92.94 E-value=0.028 Score=36.31 Aligned_cols=22 Identities=55% Similarity=0.833 Sum_probs=18.7
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+.|..++.||.|+||.||+|.+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~ 25 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGID 25 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEE
Confidence 4577889999999999999853
No 223
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=92.88 E-value=0.043 Score=36.49 Aligned_cols=21 Identities=33% Similarity=0.501 Sum_probs=18.8
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
..|..++.||+|+||.||+|.
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~ 45 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFAR 45 (317)
T ss_pred hhhhhhheeccCCCeEEEEEE
Confidence 458899999999999999986
No 224
>KOG0032|consensus
Probab=92.84 E-value=0.049 Score=38.82 Aligned_cols=21 Identities=33% Similarity=0.457 Sum_probs=18.7
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.|++.+.||+|+||.||.|.
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~ 55 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCR 55 (382)
T ss_pred ccEEehhhhCCCCceEEEEEE
Confidence 468888899999999999986
No 225
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=92.79 E-value=0.056 Score=36.06 Aligned_cols=22 Identities=27% Similarity=0.530 Sum_probs=17.2
Q ss_pred CCCCc-cccccCCccceEeeecC
Q psy17601 43 EDFEP-LKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~-~~~iG~G~fG~V~La~~ 64 (64)
+.|.. .++||.|+||.||+|.+
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~ 30 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYD 30 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEE
Confidence 34554 46899999999999864
No 226
>KOG0194|consensus
Probab=92.79 E-value=0.055 Score=39.95 Aligned_cols=22 Identities=45% Similarity=0.523 Sum_probs=17.7
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+|-...+.||.|+||+|+.+.
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~ 177 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGK 177 (474)
T ss_pred ccCccccceeecccccEEEEEE
Confidence 3555667899999999999874
No 227
>smart00090 RIO RIO-like kinase.
Probab=92.70 E-value=0.051 Score=35.98 Aligned_cols=20 Identities=10% Similarity=-0.115 Sum_probs=18.1
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.|.+.+.||.|+||.||+|.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~ 48 (237)
T smart00090 29 LSAIGGCISTGKEANVYHAL 48 (237)
T ss_pred hHHhCCeeccCcceeEEEEE
Confidence 47788999999999999996
No 228
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=92.54 E-value=0.049 Score=35.96 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=19.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
..|.+++.||.|+||.||+|.
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~ 39 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAI 39 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEE
Confidence 569999999999999999886
No 229
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=92.42 E-value=0.072 Score=35.88 Aligned_cols=22 Identities=9% Similarity=-0.093 Sum_probs=19.4
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
-..|..++++|.|+||.|+|+.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~ 51 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLID 51 (232)
T ss_pred hCceEEEEEecCCCceEEEEEe
Confidence 3579999999999999999974
No 230
>KOG0193|consensus
Probab=92.34 E-value=0.053 Score=41.53 Aligned_cols=22 Identities=27% Similarity=0.335 Sum_probs=17.7
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+++.+...||+|+||+||-++
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~ 412 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGR 412 (678)
T ss_pred HHHhhccceeccccccceeecc
Confidence 4556667799999999999765
No 231
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=92.06 E-value=0.055 Score=38.65 Aligned_cols=21 Identities=10% Similarity=0.066 Sum_probs=18.6
Q ss_pred CCCccccccCCccceEeeecC
Q psy17601 44 DFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~~ 64 (64)
.|.+.+.||+|+||.||+|.+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~ 88 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATR 88 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEE
Confidence 388899999999999999863
No 232
>KOG0577|consensus
Probab=92.05 E-value=0.052 Score=42.21 Aligned_cols=20 Identities=40% Similarity=0.655 Sum_probs=17.7
Q ss_pred CCccccccCCccceEeeecC
Q psy17601 45 FEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~~ 64 (64)
|.=++-||.|+||-||.|+|
T Consensus 28 f~dLrEIGHGSFGAVYfArd 47 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARD 47 (948)
T ss_pred HHHHHHhcCCccceeEEeec
Confidence 66688899999999999986
No 233
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=91.62 E-value=0.11 Score=32.77 Aligned_cols=19 Identities=16% Similarity=0.004 Sum_probs=16.6
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
|.+.+.||.|+||.||.+.
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~ 35 (198)
T cd05144 17 ESLGNQIGVGKESDVYLAL 35 (198)
T ss_pred hhcCCccccCcceEEEEEE
Confidence 6667899999999999875
No 234
>KOG0660|consensus
Probab=91.46 E-value=0.095 Score=37.67 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=18.3
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|..++.||+|+||.|+.|.|
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~ 43 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKD 43 (359)
T ss_pred ceecccccccCcceeeEEEEEE
Confidence 4566689999999999998864
No 235
>KOG1026|consensus
Probab=91.30 E-value=0.05 Score=42.36 Aligned_cols=24 Identities=25% Similarity=0.296 Sum_probs=20.0
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..+|-..+.-||.|+||+||+|+
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~ 506 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAE 506 (774)
T ss_pred echhheeehhhhcCchhhhhhhhh
Confidence 455677778889999999999985
No 236
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=91.28 E-value=0.068 Score=35.40 Aligned_cols=22 Identities=36% Similarity=0.554 Sum_probs=18.9
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|..++.||.|+||.||+|++
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~ 36 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARD 36 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEE
Confidence 3488889999999999999863
No 237
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=90.84 E-value=0.12 Score=34.37 Aligned_cols=19 Identities=37% Similarity=0.550 Sum_probs=16.5
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
|..+..||.|+||.||+|.
T Consensus 23 ~~~~~~lg~g~~g~v~~~~ 41 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFAT 41 (313)
T ss_pred hhcceeeccCCCeEEEEEE
Confidence 6667789999999999985
No 238
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=90.72 E-value=0.12 Score=33.49 Aligned_cols=24 Identities=42% Similarity=0.502 Sum_probs=20.4
Q ss_pred CCCCCCccccccCCccceEeeecC
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..+.|+..+.||.|+||.||.|.+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~ 40 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATD 40 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEE
Confidence 446799999999999999999863
No 239
>KOG0669|consensus
Probab=90.70 E-value=0.025 Score=40.03 Aligned_cols=22 Identities=45% Similarity=0.715 Sum_probs=19.4
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.|+.+..||+|.||+|++|+
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr 37 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKAR 37 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHh
Confidence 4678888999999999999986
No 240
>KOG1166|consensus
Probab=90.64 E-value=0.11 Score=41.46 Aligned_cols=23 Identities=35% Similarity=0.476 Sum_probs=19.6
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.-++|.|-+.||+|+||+||.|.
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~ 718 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVAT 718 (974)
T ss_pred cceeEEEEeeeccccceEEEEee
Confidence 34578888899999999999985
No 241
>KOG1187|consensus
Probab=90.53 E-value=0.15 Score=35.88 Aligned_cols=21 Identities=33% Similarity=0.699 Sum_probs=18.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
++|..-.+||+|+||.||.+.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~ 95 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGV 95 (361)
T ss_pred hCCchhcceecCCCeEEEEEE
Confidence 678888899999999999763
No 242
>KOG0581|consensus
Probab=90.42 E-value=0.12 Score=37.22 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=22.3
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++++|++.+..||.|+-|.|++|+
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~ 99 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVR 99 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEE
Confidence 4566799999999999999999986
No 243
>KOG0575|consensus
Probab=89.97 E-value=0.15 Score=38.81 Aligned_cols=22 Identities=23% Similarity=0.656 Sum_probs=19.6
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|..-++||+|+|..||.|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~ 39 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD 39 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE
Confidence 4599999999999999999875
No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=89.85 E-value=0.13 Score=33.90 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=17.8
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
+-|+....||.|+||.||+|.+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~ 42 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIARE 42 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEE
Confidence 4566677899999999999853
No 245
>KOG0606|consensus
Probab=89.78 E-value=0.23 Score=40.36 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=22.7
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...-+||+.||+|-.|+||-||++++
T Consensus 79 ~p~e~df~~IklisngAygavylvrh 104 (1205)
T KOG0606|consen 79 APSESDFNTIKLISNGAYGAVYLVRH 104 (1205)
T ss_pred CCCccccceeEeeccCCCCceeeeec
Confidence 34558999999999999999999964
No 246
>KOG1095|consensus
Probab=89.64 E-value=0.18 Score=40.47 Aligned_cols=23 Identities=35% Similarity=0.648 Sum_probs=18.1
Q ss_pred CCCCCCCccccccCCccceEeee
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La 62 (64)
++.+.-.....||+|+||+||-+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g 711 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEG 711 (1025)
T ss_pred CChhheEeeeeeccccccceEEE
Confidence 34456666789999999999965
No 247
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=89.61 E-value=0.18 Score=38.62 Aligned_cols=20 Identities=30% Similarity=0.338 Sum_probs=16.9
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
+|....+||+|+||.||.|.
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~ 710 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGK 710 (968)
T ss_pred hCCcccEEccCCCeeEEEEE
Confidence 45666789999999999986
No 248
>KOG0671|consensus
Probab=89.46 E-value=0.17 Score=36.99 Aligned_cols=23 Identities=26% Similarity=0.611 Sum_probs=19.6
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...|.+++.+|.|+||+|..+.|
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D 110 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWD 110 (415)
T ss_pred ccceehhhhhcCCcccceEEEee
Confidence 35689999999999999987764
No 249
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=88.64 E-value=0.16 Score=33.48 Aligned_cols=21 Identities=24% Similarity=0.292 Sum_probs=17.5
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.|..+..||.|+||.||+|.
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~ 42 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIAT 42 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEE
Confidence 456667889999999999885
No 250
>KOG0197|consensus
Probab=88.57 E-value=0.091 Score=38.89 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=16.1
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.+..++-||+|.||+|++..
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~ 226 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGK 226 (468)
T ss_pred HHHHHHHhcCCccceEEEEE
Confidence 34457789999999999874
No 251
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=88.43 E-value=0.21 Score=32.59 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=17.8
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.|...+.||.|+||.||+|.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~ 39 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIAT 39 (285)
T ss_pred HhhhcceEeccCCCeEEEEEE
Confidence 356667899999999999985
No 252
>KOG0579|consensus
Probab=88.21 E-value=0.11 Score=40.94 Aligned_cols=25 Identities=32% Similarity=0.607 Sum_probs=19.7
Q ss_pred CCCC-CCCCccccccCCccceEeeec
Q psy17601 39 RLGV-EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~-~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++. +.+++|--||.|+||+||.|.
T Consensus 27 dlnP~d~WeIiGELGDGAFGKVyKA~ 52 (1187)
T KOG0579|consen 27 DLNPRDHWEIIGELGDGAFGKVYKAV 52 (1187)
T ss_pred cCCHHHHHHHHhhhcCccchhhhhhh
Confidence 4555 456778899999999999874
No 253
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=87.94 E-value=0.21 Score=32.90 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=15.9
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
.|+..+.||+|+||.||++.
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~ 40 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIAT 40 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEE
Confidence 34446789999999999874
No 254
>KOG0586|consensus
Probab=87.92 E-value=0.29 Score=37.31 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=22.2
Q ss_pred CCCCCCCCccccccCCccceEeeecC
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+-.|.+++.||+|.|++|.||+.
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~ 77 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARH 77 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEe
Confidence 44567899999999999999999863
No 255
>KOG4279|consensus
Probab=87.91 E-value=0.26 Score=39.24 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=14.1
Q ss_pred cccCCccceEeeecC
Q psy17601 50 VIGRGAFGECPKKID 64 (64)
Q Consensus 50 ~iG~G~fG~V~La~~ 64 (64)
+||+|+||.||-|+|
T Consensus 582 VLGKGTYG~VYA~RD 596 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARD 596 (1226)
T ss_pred EeecCceeEEEeecc
Confidence 799999999999986
No 256
>KOG0192|consensus
Probab=87.89 E-value=0.22 Score=35.34 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=19.2
Q ss_pred CCCCCCCccccccCCccceEeeec
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+..+++.+...||+|+||+||-+.
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~ 61 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGK 61 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEE
Confidence 445677777789999999999664
No 257
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=87.39 E-value=0.34 Score=35.33 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=15.3
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
|...+.||+|+||.||++.
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~ 353 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGE 353 (535)
T ss_pred cCccceeccCCcEEEEEEe
Confidence 3456789999999999853
No 258
>KOG0662|consensus
Probab=86.96 E-value=0.28 Score=33.51 Aligned_cols=21 Identities=24% Similarity=0.605 Sum_probs=17.8
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
..|+.+.-||.|+||.|+.|+
T Consensus 2 ~~ydkmekigegtygtvfkar 22 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKAR 22 (292)
T ss_pred cchHHHHhhcCCcceeeEecc
Confidence 356778889999999999886
No 259
>PRK10345 hypothetical protein; Provisional
Probab=86.46 E-value=0.43 Score=31.27 Aligned_cols=17 Identities=18% Similarity=0.427 Sum_probs=14.0
Q ss_pred CCccccccCCccceEee
Q psy17601 45 FEPLKVIGRGAFGECPK 61 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~L 61 (64)
......||+|+||.||.
T Consensus 4 L~~~~~LG~G~~~~Vy~ 20 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA 20 (210)
T ss_pred cCCcceecCCCceEEEE
Confidence 44567899999999985
No 260
>KOG1345|consensus
Probab=85.94 E-value=0.27 Score=35.18 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.5
Q ss_pred CCCC-CCCCccccccCCccceEeeec
Q psy17601 39 RLGV-EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~-~dF~~~~~iG~G~fG~V~La~ 63 (64)
++.+ +.|.+.+++|.|-||++.||+
T Consensus 19 kv~l~d~y~I~k~lgeG~FgkIlL~e 44 (378)
T KOG1345|consen 19 KVDLEDVYTINKQLGEGRFGKILLAE 44 (378)
T ss_pred ccchhhhhhHHHHhcccceeeEEeee
Confidence 3444 789999999999999999986
No 261
>KOG3653|consensus
Probab=84.37 E-value=0.44 Score=35.82 Aligned_cols=23 Identities=35% Similarity=0.569 Sum_probs=18.4
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
++...+.+.+||+|.||.||.|-
T Consensus 208 ~l~pl~l~eli~~Grfg~V~Kaq 230 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQ 230 (534)
T ss_pred cCCchhhHHHhhcCccceeehhh
Confidence 45566667799999999999873
No 262
>KOG1290|consensus
Probab=83.58 E-value=0.49 Score=35.86 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=19.2
Q ss_pred CCCCccccccCCccceEeeecC
Q psy17601 43 EDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~~ 64 (64)
..|-+++-||=|+|.+||||.|
T Consensus 78 gRY~v~rKLGWGHFSTVWLawD 99 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWD 99 (590)
T ss_pred ceEEEEEeccccccceeEEEee
Confidence 4566888999999999999976
No 263
>KOG2345|consensus
Probab=82.39 E-value=0.6 Score=32.83 Aligned_cols=25 Identities=12% Similarity=0.256 Sum_probs=21.8
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++-+.|.+.+.+|.|+|.-|+|+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~ 41 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVK 41 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeec
Confidence 4566789999999999999999985
No 264
>PRK12274 serine/threonine protein kinase; Provisional
Probab=82.05 E-value=0.92 Score=30.52 Aligned_cols=20 Identities=10% Similarity=-0.039 Sum_probs=16.6
Q ss_pred CCccccccCCccceEeeecC
Q psy17601 45 FEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~~ 64 (64)
+.+..+|++|+||+|+++.+
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~ 23 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG 23 (218)
T ss_pred cccceeecCCCcceEEEeec
Confidence 45677899999999999853
No 265
>PF13035 DUF3896: Protein of unknown function (DUF3896)
Probab=81.17 E-value=3.2 Score=22.56 Aligned_cols=28 Identities=25% Similarity=0.312 Sum_probs=22.0
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQKE 29 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~~e 29 (64)
++|-++|.++.|++++++++.-.....|
T Consensus 19 q~lc~kls~~~ls~~er~qi~~eidnye 46 (61)
T PF13035_consen 19 QQLCKKLSSMHLSEKEREQIKLEIDNYE 46 (61)
T ss_pred HHHHHHHhhcccCHHHHHHHHhhhhhHH
Confidence 4677899999999999998876655443
No 266
>KOG0584|consensus
Probab=81.16 E-value=0.76 Score=35.30 Aligned_cols=15 Identities=53% Similarity=0.837 Sum_probs=14.2
Q ss_pred cccCCccceEeeecC
Q psy17601 50 VIGRGAFGECPKKID 64 (64)
Q Consensus 50 ~iG~G~fG~V~La~~ 64 (64)
+||+|+|-+||.|+|
T Consensus 47 vLGrGafKtVYka~D 61 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFD 61 (632)
T ss_pred hcccccceeeeeccc
Confidence 899999999999987
No 267
>KOG0668|consensus
Probab=80.98 E-value=0.27 Score=34.56 Aligned_cols=23 Identities=30% Similarity=0.655 Sum_probs=20.6
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+||++++-+|+|.|.+|+-++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~ 58 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGI 58 (338)
T ss_pred ccchHHHHHHHcCccHhhHhccc
Confidence 67999999999999999998654
No 268
>KOG2052|consensus
Probab=80.35 E-value=0.73 Score=34.50 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=17.7
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+-.++.+||+|-||+||-+.
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~ 231 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGR 231 (513)
T ss_pred heeEEEEEecCccccceeecc
Confidence 567778899999999998754
No 269
>KOG4250|consensus
Probab=78.56 E-value=1 Score=35.07 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=14.6
Q ss_pred CccccccCCccceEeeec
Q psy17601 46 EPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 46 ~~~~~iG~G~fG~V~La~ 63 (64)
..-..||+||||.||..+
T Consensus 16 ~~~e~LG~Ga~g~V~rgr 33 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGR 33 (732)
T ss_pred eehhhhcCCccceeeeec
Confidence 334589999999999875
No 270
>KOG1165|consensus
Probab=77.48 E-value=1.2 Score=32.61 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=17.1
Q ss_pred CCCccccccCCccceEeee
Q psy17601 44 DFEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La 62 (64)
.|.+-+-||.|+||..++.
T Consensus 29 hyrVGkKIGeGsFG~lf~G 47 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLG 47 (449)
T ss_pred cceeccccccCcceeeecc
Confidence 6999999999999998864
No 271
>KOG0574|consensus
Probab=77.32 E-value=0.28 Score=35.74 Aligned_cols=21 Identities=33% Similarity=0.665 Sum_probs=18.3
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
+-|+++--||.|+||.|+.|+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAI 53 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAI 53 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHH
Confidence 458888899999999999875
No 272
>KOG1025|consensus
Probab=74.97 E-value=1.4 Score=35.71 Aligned_cols=19 Identities=47% Similarity=0.700 Sum_probs=14.9
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
+...++||.|+||.||..+
T Consensus 698 lkk~kvLGsgAfGtV~kGi 716 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGI 716 (1177)
T ss_pred hhhhceeccccceeEEeee
Confidence 3445689999999999754
No 273
>KOG1006|consensus
Probab=74.60 E-value=0.76 Score=32.83 Aligned_cols=23 Identities=35% Similarity=0.642 Sum_probs=17.8
Q ss_pred CCCCCCCCccccccCCccceEee
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPK 61 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~L 61 (64)
.++.++.+-+-.||+|+||.|+.
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~K 82 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNK 82 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhh
Confidence 34556667788999999999964
No 274
>PHA02988 hypothetical protein; Provisional
Probab=74.40 E-value=1.4 Score=28.88 Aligned_cols=24 Identities=17% Similarity=0.209 Sum_probs=19.1
Q ss_pred CCCCCCCcc--ccccCCccceEeeec
Q psy17601 40 LGVEDFEPL--KVIGRGAFGECPKKI 63 (64)
Q Consensus 40 ~~~~dF~~~--~~iG~G~fG~V~La~ 63 (64)
+..+|++.. ..||.|++|.||.+.
T Consensus 15 i~~~~i~~~~~~~i~~g~~~~v~~~~ 40 (283)
T PHA02988 15 IESDDIDKYTSVLIKENDQNSIYKGI 40 (283)
T ss_pred cCHHHcCCCCCeEEeeCCceEEEEEE
Confidence 455666666 689999999999875
No 275
>KOG1167|consensus
Probab=73.77 E-value=0.69 Score=33.96 Aligned_cols=23 Identities=26% Similarity=0.510 Sum_probs=19.9
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
...|..+..||.|+|+.|++|.+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~ 57 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATD 57 (418)
T ss_pred hhhhhhhccccccchhhhhhhhH
Confidence 35788899999999999999864
No 276
>KOG0582|consensus
Probab=72.21 E-value=2.3 Score=32.01 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=23.2
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++.++|++...||.|.=+.||+|+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~ 46 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLAR 46 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeee
Confidence 5788999999999999999999997
No 277
>PF11181 YflT: Heat induced stress protein YflT
Probab=72.18 E-value=6.4 Score=22.89 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=20.9
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHA 26 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~ 26 (64)
..+..+|.++|||+++..++...+.
T Consensus 71 d~~~~~l~~lGl~~~ea~~y~~~l~ 95 (103)
T PF11181_consen 71 DELRSKLESLGLSEDEAERYEEELD 95 (103)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3578899999999999888877664
No 278
>KOG0200|consensus
Probab=71.72 E-value=2 Score=32.20 Aligned_cols=20 Identities=35% Similarity=0.645 Sum_probs=15.7
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
++.+.+.||.|+||+|+.+.
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~ 316 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKAL 316 (609)
T ss_pred hccccceeecccccceEeEE
Confidence 34455699999999999874
No 279
>KOG4257|consensus
Probab=71.38 E-value=2.8 Score=33.18 Aligned_cols=16 Identities=38% Similarity=0.796 Sum_probs=13.6
Q ss_pred cccccCCccceEeeec
Q psy17601 48 LKVIGRGAFGECPKKI 63 (64)
Q Consensus 48 ~~~iG~G~fG~V~La~ 63 (64)
-++||.|-||.||.+.
T Consensus 394 ~r~iG~GqFGdVy~gv 409 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGV 409 (974)
T ss_pred HHhhcCCcccceeeeE
Confidence 4489999999999864
No 280
>KOG1989|consensus
Probab=71.03 E-value=2.2 Score=33.42 Aligned_cols=21 Identities=24% Similarity=0.302 Sum_probs=17.6
Q ss_pred CCCccccccCCccceEeeecC
Q psy17601 44 DFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~~ 64 (64)
...+.+.|-.|||+.||||.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~ 58 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQD 58 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEe
Confidence 445677999999999999974
No 281
>KOG0587|consensus
Probab=70.81 E-value=2.2 Score=34.18 Aligned_cols=23 Identities=35% Similarity=0.586 Sum_probs=19.9
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
--+-|+++-+||.|.||+||.+.
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k 39 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGR 39 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEe
Confidence 34679999999999999999874
No 282
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=70.76 E-value=2.3 Score=31.85 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=18.1
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.++|+. +.||.||+|+|+.|.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~ 139 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFAR 139 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEE
Confidence 356887 899999999999985
No 283
>KOG1033|consensus
Probab=68.80 E-value=2.1 Score=32.24 Aligned_cols=23 Identities=39% Similarity=0.678 Sum_probs=19.6
Q ss_pred CCCCCCCccccccCCccceEeee
Q psy17601 40 LGVEDFEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 40 ~~~~dF~~~~~iG~G~fG~V~La 62 (64)
...++|+...++|+|+||.|+-|
T Consensus 46 r~a~~~e~~~~~~~~g~~~~~~~ 68 (516)
T KOG1033|consen 46 REANDFEPGQCLGRGGFGVVFSA 68 (516)
T ss_pred hhhccccccccccccCccccCCc
Confidence 34689999999999999999754
No 284
>KOG0596|consensus
Probab=68.05 E-value=2.1 Score=33.05 Aligned_cols=22 Identities=32% Similarity=0.431 Sum_probs=19.6
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
=..|++++.||+|+=.+||+|.
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~ 381 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVL 381 (677)
T ss_pred cchhhHHHhhcCCCcceeeeee
Confidence 3579999999999999999986
No 285
>KOG4258|consensus
Probab=67.42 E-value=2.8 Score=33.77 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=12.9
Q ss_pred cccccCCccceEeee
Q psy17601 48 LKVIGRGAFGECPKK 62 (64)
Q Consensus 48 ~~~iG~G~fG~V~La 62 (64)
.+.||.|+||.||+.
T Consensus 999 ~relg~gsfg~Vy~g 1013 (1025)
T KOG4258|consen 999 GRELGQGSFGMVYEG 1013 (1025)
T ss_pred hhhhccCccceEEEe
Confidence 557999999999974
No 286
>KOG4717|consensus
Probab=67.00 E-value=1.6 Score=33.89 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=18.2
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
.-|+.-+.||+|+|..|.||+
T Consensus 18 GLYDLekTlG~GHFAVVKLAr 38 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLAR 38 (864)
T ss_pred eeehhhhhhcCCceehhhhhh
Confidence 357778899999999999986
No 287
>KOG0664|consensus
Probab=65.35 E-value=4.4 Score=29.34 Aligned_cols=23 Identities=39% Similarity=0.567 Sum_probs=18.9
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
--|.+.=+.||=|+||.||-+-|
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTD 74 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTD 74 (449)
T ss_pred cccCCCCCcccccceeEEEeccC
Confidence 35677889999999999997654
No 288
>KOG0199|consensus
Probab=64.23 E-value=4.8 Score=32.30 Aligned_cols=57 Identities=19% Similarity=0.376 Sum_probs=33.7
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHH----------HHhh---hccCC--------------CCCCCCccccccCCccce
Q psy17601 6 ESLKDESLSETQRQEKRQQHAQKETE----------FLRL---KRSRL--------------GVEDFEPLKVIGRGAFGE 58 (64)
Q Consensus 6 ~~l~~~~l~~~~~~~~~~~~~~~e~~----------~~r~---~~~~~--------------~~~dF~~~~~iG~G~fG~ 58 (64)
..|.+.|+..-+++++++++.+.... |.+. ++... ..++......||.|+||.
T Consensus 46 eDLl~IGMgRp~qRRLrea~kkm~~~~k~kswvkKvf~ga~p~h~~~t~~~~~p~~~lkclIpee~i~l~e~LG~GsFgv 125 (1039)
T KOG0199|consen 46 EDLLEIGMGRPQQRRLREAIKKMSREMKNKSWVKKVFIGADPSHPAQTNSVANPSIDLKCLIPEEQIKLYELLGEGSFGV 125 (1039)
T ss_pred hhhhhhccCcHHHHHHHHHHHHhhhhccccchHHHHhccCCccccccccCCCCcCCCcceeccHHHHHHHHHhcCcceee
Confidence 45667777777777888877764333 1111 11110 112333455799999999
Q ss_pred Eeee
Q psy17601 59 CPKK 62 (64)
Q Consensus 59 V~La 62 (64)
|+-+
T Consensus 126 V~rg 129 (1039)
T KOG0199|consen 126 VKRG 129 (1039)
T ss_pred Eeec
Confidence 9865
No 289
>KOG0196|consensus
Probab=62.47 E-value=4 Score=32.80 Aligned_cols=25 Identities=32% Similarity=0.379 Sum_probs=19.1
Q ss_pred CCCCCCCCccccccCCccceEeeec
Q psy17601 39 RLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 39 ~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
-+..+.-.+-++||.|-||+|+..+
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~Gr 649 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGR 649 (996)
T ss_pred hcChhheEEEEEEecccccceeccc
Confidence 3455566667799999999998754
No 290
>PF08988 DUF1895: Protein of unknown function (DUF1895); InterPro: IPR015081 The YscE protein, produced by the pathogen Yersinia, assumes a secondary structure composed of two anti-parallel alpha-helices separated by a flexible loop. The function of this protein is, as yet, unknown. ; PDB: 1ZW0_B 2P58_A 2UWJ_E 2Q1K_D 3PH0_B.
Probab=57.78 E-value=18 Score=20.11 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=33.1
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcc
Q psy17601 3 KLEESLKDESLSETQRQEKRQQHAQKETEFLRLKRSRLGVEDFEPL 48 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~~~~~~e~~~~r~~~~~~~~~dF~~~ 48 (64)
+||+.|.. -+++++..+...+....+..-|.-..-..+++|...
T Consensus 3 ~LE~~L~~--~~~~~~~~i~~~L~~a~~~vkr~L~~G~~P~eyQq~ 46 (68)
T PF08988_consen 3 NLEQRLSN--ASGEEARAIEQQLRQAQSQVKRKLDRGGTPQEYQQL 46 (68)
T ss_dssp HHHHHHTC--TSHHHHHHHHHHHHHHHHHHHHHHTCTSSHHHHHHH
T ss_pred hHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 68888887 578888888888888888777766656666666543
No 291
>PF02216 B: B domain; InterPro: IPR003132 This entry represents the immunoglobulin-binding domain found in the Staphylococcus aureus virulence factor protein A (SpA). Protein A contains five highly homologous Ig-binding domains in tandem (designated domains E, D, A, B and C), which share a common structure consisting of three helices in a closed left-handed twist. Protein A can exist in both secreted and membrane-bound forms, and has two distinct Ig-binding activities: each domain can bind Fc-gamma (the constant region of IgG involved in effector functions) and Fab (the Ig fragment responsible for antigen recognition) [].; GO: 0019865 immunoglobulin binding, 0009405 pathogenesis; PDB: 1EDL_A 1EDI_A 1EDJ_A 1EDK_A 2B88_A 2B87_A 2B89_A 1FC2_C 1DEE_H 1ZXG_A ....
Probab=56.93 E-value=17 Score=19.54 Aligned_cols=24 Identities=29% Similarity=0.241 Sum_probs=18.2
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 4 LEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 4 Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
.=+.|...+|++++|+.+...+-.
T Consensus 13 FY~vl~~~nLteeQrn~yI~~lKd 36 (54)
T PF02216_consen 13 FYEVLHMPNLTEEQRNGYIQSLKD 36 (54)
T ss_dssp HHHHHCSTTS-HHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCHHHHHhHHHHHhh
Confidence 446788999999999998877643
No 292
>KOG0984|consensus
Probab=56.16 E-value=3.5 Score=28.62 Aligned_cols=19 Identities=32% Similarity=0.711 Sum_probs=14.6
Q ss_pred CCCCCccccccCCccceEe
Q psy17601 42 VEDFEPLKVIGRGAFGECP 60 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~ 60 (64)
.+|...+.-||+|+||.|-
T Consensus 45 ad~L~~i~elGrGayG~ve 63 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVE 63 (282)
T ss_pred hhhhhhhhhhcCCccchhh
Confidence 3556667789999999873
No 293
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=53.28 E-value=6.4 Score=28.42 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=15.7
Q ss_pred CCCCccccccCCccceEeeec
Q psy17601 43 EDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La~ 63 (64)
..|+. ..||.||+|+||.|.
T Consensus 118 ~~fd~-~plasaSigQVh~A~ 137 (437)
T TIGR01982 118 AEFEE-KPLAAASIAQVHRAR 137 (437)
T ss_pred hhCCC-cceeeeehhheEEEE
Confidence 34443 579999999999985
No 294
>KOG1094|consensus
Probab=51.37 E-value=8 Score=30.42 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=15.3
Q ss_pred CCccccccCCccceEeeec
Q psy17601 45 FEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~~iG~G~fG~V~La~ 63 (64)
.-+.+-||.|-||+|.|+.
T Consensus 540 L~~~ekiGeGqFGEVhLCe 558 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCE 558 (807)
T ss_pred eehhhhhcCcccceeEEEE
Confidence 3445679999999999975
No 295
>cd07921 PCA_45_Doxase_A_like Subunit A of the Class III Extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, and similar enzymes. This subfamily includes the A subunit of protocatechuate (PCA) 4,5-dioxygenase (LigAB) and two subfamilies of unknown function. The A subunit is the smaller, non-catalytic subunit of LigAB. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds. PCA 4,5-dioxygenase is one of the aromatic ring opening dioxygenases which play key roles in the degradation of aromatic compounds. As members of the Class III extradiol dioxygenase family, the enzymes use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like class III enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit.
Probab=50.78 E-value=19 Score=21.85 Aligned_cols=18 Identities=28% Similarity=0.204 Sum_probs=15.1
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..|++.+||++|++.+.
T Consensus 37 eAy~~~~gLTeEe~~AV~ 54 (106)
T cd07921 37 EAYCDKFGLTEEQKQAVL 54 (106)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 678899999999987764
No 296
>cd07321 Extradiol_Dioxygenase_3A_like Subunit A of Class III extradiol dioxygenases. Extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. There are two major groups of dioxygenases according to the cleavage site of the aromatic ring. Intradiol enzymes cleave the aromatic ring between two hydroxyl groups, whereas extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Extradiol dioxygenases can be divided into three classes. Class I and II enzymes are evolutionary related and show sequence similarity, with the two domain class II enzymes evolving from the class I enzyme through gene duplication. Class III enzymes are different in sequence and structure and usually have two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents subunit A of c
Probab=50.72 E-value=17 Score=20.38 Aligned_cols=19 Identities=16% Similarity=0.162 Sum_probs=14.9
Q ss_pred HHHHHhcCCCCHHHHHHHH
Q psy17601 4 LEESLKDESLSETQRQEKR 22 (64)
Q Consensus 4 Le~~l~~~~l~~~~~~~~~ 22 (64)
=+..|++.+||++|++.+.
T Consensus 26 p~a~~~~~~Lt~eE~~al~ 44 (77)
T cd07321 26 PEAVLAEYGLTPEEKAALL 44 (77)
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 3567889999999987654
No 297
>cd07923 Gallate_dioxygenase_C The C-terminal domain of Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of the PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. This model represents the C-terminal domain, which is similar to the A subunit of PCA 4,5-dioxygenase (or LigAB). The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. Since enzymes in this subfamily have fused A and B subunits, the dimer interface may resemble the tetramer interface of classical LigAB enzymes. This enzyme belongs to the class III extradiol dioxygenase family, composed of enzymes whi
Probab=49.09 E-value=18 Score=21.46 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.0
Q ss_pred HHHHHHhcCCCCHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKR 22 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~ 22 (64)
+-|..|.+.+||++|++.+.
T Consensus 27 D~ea~~~e~gLt~Ee~~av~ 46 (94)
T cd07923 27 DPEALFDEAGLTEEERTLIR 46 (94)
T ss_pred CHHHHHHHcCCCHHHHHHHH
Confidence 34778999999999987654
No 298
>KOG4236|consensus
Probab=48.21 E-value=7.3 Score=30.53 Aligned_cols=19 Identities=26% Similarity=0.543 Sum_probs=14.4
Q ss_pred CCccc--cccCCccceEeeec
Q psy17601 45 FEPLK--VIGRGAFGECPKKI 63 (64)
Q Consensus 45 F~~~~--~iG~G~fG~V~La~ 63 (64)
|+++. +||.|-||.||=++
T Consensus 564 YQif~devLGSGQFG~VYgg~ 584 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGK 584 (888)
T ss_pred HHhhhHhhccCCcceeeecce
Confidence 44443 89999999999653
No 299
>PF10346 Con-6: Conidiation protein 6; InterPro: IPR018824 This entry represents a conserved region found in fungal conidiation-specific protein 6 []. This protein is expressed approximately 6 hours after the induction of development and is induced just prior to major constriction-chain growth [].
Probab=45.83 E-value=39 Score=16.68 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=18.3
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHH
Q psy17601 4 LEESLKDESLSETQRQEKRQQHA 26 (64)
Q Consensus 4 Le~~l~~~~l~~~~~~~~~~~~~ 26 (64)
+...|.+++.|++-|+...+.+.
T Consensus 10 ~KAal~NPnvSeeaK~~A~~~Le 32 (36)
T PF10346_consen 10 YKAALHNPNVSEEAKQHAREKLE 32 (36)
T ss_pred HHHHhcCCCcCHHHHHHHHHHHH
Confidence 56778999999998887766654
No 300
>PF14167 YfkD: YfkD-like protein
Probab=44.42 E-value=11 Score=25.65 Aligned_cols=13 Identities=23% Similarity=0.284 Sum_probs=11.1
Q ss_pred cccCCccceEeee
Q psy17601 50 VIGRGAFGECPKK 62 (64)
Q Consensus 50 ~iG~G~fG~V~La 62 (64)
-=|+-+||+|||+
T Consensus 181 EkGkvtyGEVYl~ 193 (232)
T PF14167_consen 181 EKGKVTYGEVYLV 193 (232)
T ss_pred ccCceeEEEEEEE
Confidence 4688999999986
No 301
>KOG1024|consensus
Probab=44.18 E-value=12 Score=28.18 Aligned_cols=28 Identities=14% Similarity=0.180 Sum_probs=21.0
Q ss_pred hccCCCCCCCCccccccCCccceEeeec
Q psy17601 36 KRSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 36 ~~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+...+....|....++..|.||+||-++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI 304 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGI 304 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeee
Confidence 3334445567778899999999999874
No 302
>KOG4645|consensus
Probab=44.11 E-value=12 Score=31.59 Aligned_cols=14 Identities=36% Similarity=0.748 Sum_probs=12.6
Q ss_pred cccCCccceEeeec
Q psy17601 50 VIGRGAFGECPKKI 63 (64)
Q Consensus 50 ~iG~G~fG~V~La~ 63 (64)
.||.|.||+||-|.
T Consensus 1242 ~Ig~G~fG~VYtav 1255 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAV 1255 (1509)
T ss_pred ccCCcceeeeEEee
Confidence 59999999999875
No 303
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=43.70 E-value=25 Score=20.18 Aligned_cols=19 Identities=16% Similarity=0.263 Sum_probs=15.4
Q ss_pred HHHHHhcCCCCHHHHHHHH
Q psy17601 4 LEESLKDESLSETQRQEKR 22 (64)
Q Consensus 4 Le~~l~~~~l~~~~~~~~~ 22 (64)
=+..+++.+||++|++.+.
T Consensus 27 Pea~~~~~gLt~eE~~aL~ 45 (81)
T cd07922 27 PSAVFEEYGLTPAERAALR 45 (81)
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 4677899999999987764
No 304
>KOG0033|consensus
Probab=43.61 E-value=3.4 Score=29.42 Aligned_cols=20 Identities=20% Similarity=0.562 Sum_probs=16.9
Q ss_pred CCCCccccccCCccceEeee
Q psy17601 43 EDFEPLKVIGRGAFGECPKK 62 (64)
Q Consensus 43 ~dF~~~~~iG~G~fG~V~La 62 (64)
+.|++...||+|.|..|+-+
T Consensus 11 d~y~l~e~igkG~FSvVrRc 30 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRC 30 (355)
T ss_pred hhhhHHHHHccCchHHHHHH
Confidence 67888889999999998743
No 305
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=40.74 E-value=8.9 Score=26.68 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=15.5
Q ss_pred CccccccCCccceEeeecC
Q psy17601 46 EPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 46 ~~~~~iG~G~fG~V~La~~ 64 (64)
..-.+||.|+|+.|+.|.|
T Consensus 15 ~~~~~i~~g~~~~v~~v~d 33 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTD 33 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred EEccccccCCceEEEEEEE
Confidence 3455899999999998864
No 306
>PF07746 LigA: Aromatic-ring-opening dioxygenase LigAB, LigA subunit; InterPro: IPR011986 Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes (IPR000627 from INTERPRO) use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) [, ]. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Extradiol dioxygenases are usually homo-multimeric, bind one atom of ferrous ion per subunit and have a subunit size of about 33 kDa. Extradiol dioxygenases can be divided into three classes. Class I and II enzymes (IPR000486 from INTERPRO) show sequence similarity, with the two-domain class II enzymes having evolved from a class I enzyme through gene duplication. Class III enzymes are different in sequence and structure, but they do share several common active-site characteristics with the class II enzymes, in particular the coordination sphere and the disposition of the putative catalytic base are very similar. Class III enzymes usually have two subunits, designated A (IPR004183 from INTERPRO) and B (IPR004183 from INTERPRO). LigAB is a protocatechuate 4,5-dioxygenase (1.13.11.8 from EC) that belongs to the extradiol class III enzyme family. The LigA subunit of this enzyme is multi-helical, containing a compact array of 6 short helices [].; PDB: 1BOU_A 1B4U_A.
Probab=40.50 E-value=34 Score=19.84 Aligned_cols=20 Identities=30% Similarity=0.318 Sum_probs=13.6
Q ss_pred HHHHHHhcCCCCHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKR 22 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~ 22 (64)
+=+..|++.+||++|++.+.
T Consensus 20 D~~a~~~~~~Lt~eer~av~ 39 (88)
T PF07746_consen 20 DPEAYLDEYGLTEEERQAVL 39 (88)
T ss_dssp -HHHHHHCCT--HHHHHHHH
T ss_pred CHHHHHHHcCCCHHHHHHHH
Confidence 34678899999999987753
No 307
>cd07925 LigA_like_1 The A subunit of Uncharacterized proteins with similarity to Protocatechuate 4,5-dioxygenase (LigAB). The proteins of unknown function in this subfamily are similar to the A subunit of the Protocatechuate (PCA) 4,5-dioxygenase (LigAB). LigAB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Dioxygenases play key roles in the degradation of aromatic compounds. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds.
Probab=40.05 E-value=37 Score=20.61 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=14.9
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..|++.+||++|++.+.
T Consensus 37 ~Ay~~~~~Lteeqr~av~ 54 (106)
T cd07925 37 EAYCEKFGLTPEQKQAVR 54 (106)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 567889999999987764
No 308
>KOG0983|consensus
Probab=37.82 E-value=14 Score=26.73 Aligned_cols=27 Identities=30% Similarity=0.432 Sum_probs=22.7
Q ss_pred ccCCCCCCCCccccccCCccceEeeec
Q psy17601 37 RSRLGVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
+.+..+++.+++..||.|+-|.|+.++
T Consensus 86 r~~~dindl~~l~dlGsGtcG~V~k~~ 112 (391)
T KOG0983|consen 86 RYQADINDLENLGDLGSGTCGQVWKMR 112 (391)
T ss_pred ccccChHHhhhHHhhcCCCccceEEEE
Confidence 345677899999999999999998764
No 309
>PF04201 TPD52: Tumour protein D52 family; InterPro: IPR007327 The hD52 gene was originally identified through its elevated expression level in human breast carcinoma. Cloning of D52 homologues from other species has indicated that D52 may play roles in calcium-mediated signal transduction and cell proliferation. Two human homologues of hD52, hD53 and hD54, have also been identified, demonstrating the existence of a novel gene/protein family []. These proteins have an N-terminal coiled-coil that allows members to form homo- and heterodimers with each other [].
Probab=37.29 E-value=55 Score=21.25 Aligned_cols=22 Identities=45% Similarity=0.607 Sum_probs=18.7
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q psy17601 10 DESLSETQRQEKRQQHAQKETE 31 (64)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~e~~ 31 (64)
..+|++++++.++..+.+-|.+
T Consensus 23 ~~~LsEeE~eeLr~EL~KvEeE 44 (162)
T PF04201_consen 23 EEGLSEEEREELRSELAKVEEE 44 (162)
T ss_pred cccCCHHHHHHHHHHHHHHHHH
Confidence 3789999999999999987655
No 310
>PF14385 DUF4416: Domain of unknown function (DUF4416)
Probab=37.02 E-value=1e+02 Score=19.88 Aligned_cols=51 Identities=16% Similarity=0.330 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhccCCCCC---------------CCCccccccCCccceEeeec
Q psy17601 13 LSETQRQEKRQQHAQKETEFLRLKRSRLGVE---------------DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 13 l~~~~~~~~~~~~~~~e~~~~r~~~~~~~~~---------------dF~~~~~iG~G~fG~V~La~ 63 (64)
+++++--.+......-|..|....+.++|++ +|-.---||+|-|++|-|.+
T Consensus 68 i~~~~L~~iK~~tn~iE~~~~~~g~R~VNiDPGYl~~~~lVLAt~K~~~HRIYL~~GIyaE~tL~y 133 (164)
T PF14385_consen 68 IHPEELADIKLETNEIEKEFAKDGKRRVNIDPGYLTLERLVLATTKNFSHRIYLGDGIYAELTLIY 133 (164)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCceEEeCceecccCeEEEEecCCCCcceeccCCEEEEEEEEE
Confidence 3455555555555556777776434444433 44444469999999987653
No 311
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=34.78 E-value=77 Score=19.90 Aligned_cols=24 Identities=33% Similarity=0.416 Sum_probs=17.4
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
++|++.|. .+|+++++...+.+..
T Consensus 8 ~~L~~~L~--~lp~~e~~e~l~~Y~e 31 (181)
T PF08006_consen 8 NELEKYLK--KLPEEEREEILEYYEE 31 (181)
T ss_pred HHHHHHHH--cCCHHHHHHHHHHHHH
Confidence 46888887 4888888877666554
No 312
>PF13019 Telomere_Sde2: Telomere stability and silencing
Probab=34.62 E-value=14 Score=24.02 Aligned_cols=10 Identities=40% Similarity=0.710 Sum_probs=8.2
Q ss_pred cccCCccceE
Q psy17601 50 VIGRGAFGEC 59 (64)
Q Consensus 50 ~iG~G~fG~V 59 (64)
+-|+|+||.-
T Consensus 86 ~GGKGGFGs~ 95 (162)
T PF13019_consen 86 RGGKGGFGSQ 95 (162)
T ss_pred cCCCccHHHH
Confidence 5799999963
No 313
>PRK13378 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=34.56 E-value=49 Score=20.42 Aligned_cols=18 Identities=22% Similarity=0.290 Sum_probs=14.8
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..+++-+||++|++.+.
T Consensus 48 ~Ay~~~~~Lteeqk~aV~ 65 (117)
T PRK13378 48 AAYCRKYGLNEEQKEAIR 65 (117)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 567889999999987764
No 314
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=34.40 E-value=14 Score=22.02 Aligned_cols=19 Identities=5% Similarity=0.286 Sum_probs=15.1
Q ss_pred CCCccccccCCccceEeeec
Q psy17601 44 DFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 44 dF~~~~~iG~G~fG~V~La~ 63 (64)
+|+ -..||.||.|+|+.|.
T Consensus 13 ~fd-~~PlasASiaQVh~a~ 31 (119)
T PF03109_consen 13 EFD-PEPLASASIAQVHRAR 31 (119)
T ss_pred HCC-cchhhheehhhheeee
Confidence 444 3579999999999885
No 315
>PRK13379 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=33.93 E-value=51 Score=20.43 Aligned_cols=19 Identities=21% Similarity=0.400 Sum_probs=15.3
Q ss_pred HHHHHhcCCCCHHHHHHHH
Q psy17601 4 LEESLKDESLSETQRQEKR 22 (64)
Q Consensus 4 Le~~l~~~~l~~~~~~~~~ 22 (64)
-+..|++.+||++|++.+.
T Consensus 48 e~ay~~~~~Lt~eqk~aV~ 66 (119)
T PRK13379 48 AEALMQEAGLTEQEKELIR 66 (119)
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 4677899999999987654
No 316
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=33.40 E-value=22 Score=23.88 Aligned_cols=16 Identities=13% Similarity=-0.018 Sum_probs=13.7
Q ss_pred cccccCCccceEeeec
Q psy17601 48 LKVIGRGAFGECPKKI 63 (64)
Q Consensus 48 ~~~iG~G~fG~V~La~ 63 (64)
.+.||+|++|.||++.
T Consensus 27 ~~~L~KG~~s~Vyl~~ 42 (201)
T COG2112 27 EKELAKGTTSVVYLGE 42 (201)
T ss_pred hhhhhcccccEEEEee
Confidence 5579999999999964
No 317
>TIGR02792 PCA_ligA protocatechuate 4,5-dioxygenase, alpha subunit. Protocatechuate (PCA) 4,5-dioxygenase is the first enzyme in the PCA 4,5-cleavage pathway that is an alternative to PCA 3,4-cleavage and PCA 2,3 cleavage pathways. PCA is an intermediate in the breakdown of lignin (hence the gene symbol ligA) and other compounds. Members of this family are the alpha chain of PCA 4,5-dioxygenase, or the equivalent domain of a fusion protein.
Probab=32.87 E-value=54 Score=20.24 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=14.8
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..+++-+||++|++.+.
T Consensus 42 ~Ay~d~~~Lt~eqk~av~ 59 (117)
T TIGR02792 42 SAYLDEWNLTPAQKQAVL 59 (117)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 567889999999987754
No 318
>cd07924 PCA_45_Doxase_A The A subunit of Protocatechuate 4,5-dioxygenase (LigAB) is the smaller, non-catalytic subunit. The A subunit is the non-catalytic subunit of Protocatechuate (PCA) 4,5-dioxygenase (LigAB), which is composed of A and B subunits that form a tetramer. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds. PCA 4,5-dioxygenase is one of the aromatic ring opening dioxygenases which play key roles in the degradation of aromatic compounds. As a member of the Class III extradiol dioxygenase family, LigAB uses a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.
Probab=31.81 E-value=59 Score=20.20 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=14.8
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..|++-+||++|++.+.
T Consensus 45 ~Ay~~~~~Lteeqr~aV~ 62 (121)
T cd07924 45 RAYLDKWPMTEEQKQAVL 62 (121)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 567889999999987754
No 319
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=30.66 E-value=2e+02 Score=20.37 Aligned_cols=15 Identities=33% Similarity=1.015 Sum_probs=12.2
Q ss_pred CCCcccccc-CCccce
Q psy17601 44 DFEPLKVIG-RGAFGE 58 (64)
Q Consensus 44 dF~~~~~iG-~G~fG~ 58 (64)
++..+-+|| -|.+|.
T Consensus 97 ~~~~I~IiGG~GlmG~ 112 (374)
T PRK11199 97 DLRPVVIVGGKGQLGR 112 (374)
T ss_pred ccceEEEEcCCChhhH
Confidence 667788998 898885
No 320
>PRK13377 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=29.44 E-value=67 Score=20.18 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=14.8
Q ss_pred HHHHhcCCCCHHHHHHHH
Q psy17601 5 EESLKDESLSETQRQEKR 22 (64)
Q Consensus 5 e~~l~~~~l~~~~~~~~~ 22 (64)
+..+++-+||++|++.+.
T Consensus 48 ~Ay~de~~Lteeqr~aV~ 65 (129)
T PRK13377 48 RAYLDEWPMTEEQKQAVL 65 (129)
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 567889999999987754
No 321
>PF08312 cwf21: cwf21 domain; InterPro: IPR013170 The cwf21 domain is found in proteins involved in mRNA splicing. Proteins containing this domain have been isolated as a subcomplex of the splicosome in Schizosaccharomyces pombe (Fission yeast) []. In yeast, this domain binds the protein Prp8p [], a large and highly conserved U5 snRNP protein which has been proposed as a protein cofactor at the spliceosomal catalytic centre []. The cwf21 domain is found in, amongst others, the small Cwc21p protein in yeast as well as in the much larger human ortholog SRm300 (serine/arginine repetitive matrix protein). ; PDB: 2E62_A.
Probab=29.36 E-value=89 Score=15.97 Aligned_cols=25 Identities=24% Similarity=0.423 Sum_probs=15.8
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
.|...|.+.|+++++...-.+.+..
T Consensus 15 elrd~LEe~g~~~eeIe~kv~~~R~ 39 (46)
T PF08312_consen 15 ELRDELEEQGYSEEEIEEKVDELRK 39 (46)
T ss_dssp HHHHHHHHHT--HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4677888889988877665555443
No 322
>KOG0590|consensus
Probab=28.56 E-value=20 Score=27.16 Aligned_cols=22 Identities=18% Similarity=0.413 Sum_probs=18.9
Q ss_pred CCCCCccccccCCccceEeeec
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~ 63 (64)
...|..++.||+|+|+.|.++.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~ 40 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALAS 40 (601)
T ss_pred cccccccccccccccchhhhhh
Confidence 5678999999999999998764
No 323
>PF08278 DnaG_DnaB_bind: DNA primase DnaG DnaB-binding ; InterPro: IPR013173 Eubacterial DnaG primases interact with several factors to form the replisome. One of these factors is DnaB, a helicase. This domain has been demonstrated to be responsible for the interaction between DnaG and DnaB []. This domain has a multi-helical structure that forms an orthogonal bundle [].; GO: 0003896 DNA primase activity, 0006269 DNA replication, synthesis of RNA primer; PDB: 2HAJ_A 1T3W_B.
Probab=28.51 E-value=82 Score=18.36 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=12.4
Q ss_pred HHHHHHhcCCCCHHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKRQ 23 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~ 23 (64)
.|.++....+|+++||+.++.
T Consensus 105 ~L~~k~~~~~Lt~eEk~el~~ 125 (127)
T PF08278_consen 105 ELKAKPRRGGLTDEEKQELRR 125 (127)
T ss_dssp HHHHHHTTT---HHHHHHHHH
T ss_pred HHHHhhccCCcCHHHHHHHHH
Confidence 455666667899999887654
No 324
>PF13348 Y_phosphatase3C: Tyrosine phosphatase family C-terminal region; PDB: 1YWF_A 2OZ5_B.
Probab=28.50 E-value=98 Score=16.17 Aligned_cols=22 Identities=27% Similarity=0.367 Sum_probs=13.7
Q ss_pred HHHHH-hcCCCCHHHHHHHHHHH
Q psy17601 4 LEESL-KDESLSETQRQEKRQQH 25 (64)
Q Consensus 4 Le~~l-~~~~l~~~~~~~~~~~~ 25 (64)
.+..| +..||++++.+.+++.+
T Consensus 45 ~e~Yl~~~lgl~~~~i~~Lr~~l 67 (68)
T PF13348_consen 45 VENYLREELGLSEEDIERLRERL 67 (68)
T ss_dssp HHHHHHHT-T--HHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHc
Confidence 46677 55699999888877654
No 325
>PF15188 CCDC-167: Coiled-coil domain-containing protein 167
Probab=27.96 E-value=1.2e+02 Score=17.53 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=17.3
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQ 24 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~ 24 (64)
+.++..|....|||+.|....+.
T Consensus 22 e~ve~rL~~~eLs~e~R~~lE~E 44 (85)
T PF15188_consen 22 EAVESRLRRRELSPEARRSLEKE 44 (85)
T ss_pred HHHHHHHcccCCChHHHHHHHHH
Confidence 35678899999999987665433
No 326
>PF06154 YagB_YeeU_YfjZ: YagB/YeeU/YfjZ family; InterPro: IPR009320 This family of proteins includes three proteins from Escherichia coli proteins YagB, YeeU and YfjZ. The function of these proteins is unknown. They are about 120 amino acids in length.; PDB: 2H28_A 2INW_B 2JN7_A 2EA9_A.
Probab=26.76 E-value=40 Score=20.38 Aligned_cols=11 Identities=27% Similarity=0.214 Sum_probs=8.3
Q ss_pred CCccceEeeec
Q psy17601 53 RGAFGECPKKI 63 (64)
Q Consensus 53 ~G~fG~V~La~ 63 (64)
-|++|=||+|+
T Consensus 89 lGS~GYVYiaI 99 (103)
T PF06154_consen 89 LGSCGYVYIAI 99 (103)
T ss_dssp TT-SSEEEEEE
T ss_pred CCCccEEEEEE
Confidence 37889999986
No 327
>PF09845 DUF2072: Zn-ribbon containing protein (DUF2072); InterPro: IPR018645 This archaeal Zinc-ribbon containing proteins have no known function.
Probab=25.94 E-value=30 Score=21.72 Aligned_cols=17 Identities=12% Similarity=0.442 Sum_probs=14.4
Q ss_pred CCCCCCccccccCCccc
Q psy17601 41 GVEDFEPLKVIGRGAFG 57 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG 57 (64)
--++|+.|++++.|.|-
T Consensus 82 ~~~~iESIrI~~pG~YE 98 (131)
T PF09845_consen 82 LNDRIESIRILEPGSYE 98 (131)
T ss_pred cccCcceEEEecCceEE
Confidence 34789999999999984
No 328
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=25.75 E-value=1.2e+02 Score=19.62 Aligned_cols=27 Identities=11% Similarity=0.231 Sum_probs=22.1
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQK 28 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~~ 28 (64)
+.+++.|+++..+++.|+++...+..+
T Consensus 113 ~ai~~iL~~p~V~~~~K~~i~~i~~~K 139 (155)
T PF10777_consen 113 QAIDKILQSPQVPDEIKQGIQRIISTK 139 (155)
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHhC
Confidence 467889999999999998887776654
No 329
>TIGR02433 lysidine_TilS_C tRNA(Ile)-lysidine synthetase, C-terminal domain. TIGRFAMs model TIGR02432 describes the family of the N-terminal domain of tRNA(Ile)-lysidine synthetase. This family (TIGR02433) describes a small C-terminal domain of about 50 residues present in about half the members of family TIGR02432,and in no other protein. Characterized examples of tRNA(Ile)-lysidine synthetase from E. coli and Bacillus subtilis both contain this domain.
Probab=25.01 E-value=45 Score=16.20 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=14.5
Q ss_pred hHHHHHHhcCCCCHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQE 20 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~ 20 (64)
+.|.+.+.+.++|+.+++.
T Consensus 21 k~lkk~~~e~kiP~~~R~~ 39 (47)
T TIGR02433 21 KKLKKLFIDAKVPPWLRDR 39 (47)
T ss_pred chHHHHHHHcCCCHHHHcC
Confidence 4577788889999887654
No 330
>KOG0588|consensus
Probab=24.46 E-value=32 Score=27.35 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=19.3
Q ss_pred CCCCCCccccccCCccceEeeec
Q psy17601 41 GVEDFEPLKVIGRGAFGECPKKI 63 (64)
Q Consensus 41 ~~~dF~~~~~iG~G~fG~V~La~ 63 (64)
.+.-++.-+.||+|+=|.|.||.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlak 32 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAK 32 (786)
T ss_pred cccceeccccccCCCCceehhhh
Confidence 34557788999999999999985
No 331
>TIGR03142 cytochro_ccmI cytochrome c-type biogenesis protein CcmI. This TPR repeat-containing protein is the CcmI protein (also called CycH) of c-type cytochrome biogenesis. CcmI is thought to act as an apo-cytochrome c chaperone. This model describes the N-terminal region of the protein, Members of this protein family
Probab=24.38 E-value=1.6e+02 Score=17.34 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=21.1
Q ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQQHAQK 28 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~~~~~~ 28 (64)
.+||+.+++--+++++.++...++.+.
T Consensus 46 ~ELe~d~~~G~l~~~e~~~~~~El~rr 72 (117)
T TIGR03142 46 AELERDLAEGLLDEAEAEAARAELQRR 72 (117)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 468888888888998887777777664
No 332
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.19 E-value=1.6e+02 Score=18.99 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=19.7
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
+|.+.|.+.+++|++.+....+...
T Consensus 12 ~l~~~L~~~~~~e~~~e~~L~eil~ 36 (206)
T PF06570_consen 12 DLRKYLRSSGVSEEEIEELLEEILP 36 (206)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 5788889999999998887666543
No 333
>PF07798 DUF1640: Protein of unknown function (DUF1640); InterPro: IPR024461 This family consists of uncharacterised proteins.
Probab=23.50 E-value=1.6e+02 Score=18.66 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=19.1
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
.+-+.|.+.|+|+++.+.+...+..
T Consensus 6 ~~v~~Le~~Gft~~QAe~i~~~l~~ 30 (177)
T PF07798_consen 6 KFVKRLEAAGFTEEQAEAIMKALRE 30 (177)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 3567889999999998887665444
No 334
>KOG0578|consensus
Probab=22.77 E-value=40 Score=25.82 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=19.7
Q ss_pred CCCCCccccccCCccceEeeecC
Q psy17601 42 VEDFEPLKVIGRGAFGECPKKID 64 (64)
Q Consensus 42 ~~dF~~~~~iG~G~fG~V~La~~ 64 (64)
.+.|....-||+|+=|-||+|++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~ 294 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARK 294 (550)
T ss_pred hhhhcchhhhccccccceeeeee
Confidence 45788888999999999999963
No 335
>PRK07668 hypothetical protein; Validated
Probab=22.76 E-value=1.7e+02 Score=20.18 Aligned_cols=25 Identities=8% Similarity=0.009 Sum_probs=19.9
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHH
Q psy17601 3 KLEESLKDESLSETQRQEKRQQHAQ 27 (64)
Q Consensus 3 ~Le~~l~~~~l~~~~~~~~~~~~~~ 27 (64)
+|+..|...++||++++....++..
T Consensus 12 ~L~~yL~~~glseeeieeiL~Ei~~ 36 (254)
T PRK07668 12 DTRVYLIAKGIKEEDIESFLEDAEL 36 (254)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 6788888899999998887666543
No 336
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=22.75 E-value=56 Score=21.83 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=19.1
Q ss_pred CCCCccccccCCcc-ceEeeec
Q psy17601 43 EDFEPLKVIGRGAF-GECPKKI 63 (64)
Q Consensus 43 ~dF~~~~~iG~G~f-G~V~La~ 63 (64)
++|+.+..||.|+= |.|+.+.
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~ 58 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE 58 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE
Confidence 78999999999999 9999874
No 337
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division []. Drf proteins are characterised by a variety of shared domains: an N-terminal GTPase-binding domain (GBD), formin-homology domains FH1, FH2 (IPR003104 from INTERPRO) and FH3 (IPR010472 from INTERPRO), and a C-terminal conserved Dia-autoregulatory domain (DAD) that binds the GBD. This entry represents the GBD, which is a bifunctional autoinhibitory domain that interacts with and is regulated by activated Rho family members. Mammalian Drf3 contains a CRIB-like motif within its GBD for binding to Cdc42, which is required for Cdc42 to activate and guide Drf3 towards the cell cortex where it remodels the actin skeleton [].; GO: 0003779 actin binding, 0017048 Rho GTPase binding, 0030036 actin cytoskeleton organization; PDB: 3OBV_A 2BNX_A 3EG5_D 2BAP_B 3O4X_B 1Z2C_B 2F31_A.
Probab=22.02 E-value=1.5e+02 Score=18.08 Aligned_cols=22 Identities=36% Similarity=0.519 Sum_probs=14.5
Q ss_pred hHHHHHHhcCCCCHHHHHHHHH
Q psy17601 2 AKLEESLKDESLSETQRQEKRQ 23 (64)
Q Consensus 2 ~~Le~~l~~~~l~~~~~~~~~~ 23 (64)
...++.|.++++|++.++.+.+
T Consensus 10 ~~F~~ll~~~~~~~~~r~~l~~ 31 (187)
T PF06371_consen 10 EMFEELLEELNLPEEKRKELRN 31 (187)
T ss_dssp HHHHHHHHHTT--HHHHHHHHT
T ss_pred HHHHHHHHhcCCCHHHHHHHHC
Confidence 3567888999999887666543
No 338
>PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments). The family comprises 5 homologous proteins Ia, Ib, IIa, IIb and III. Synapsins I, II, and III are encoded by 3 different genes. The a and b isoforms of synapsin I and II are splice variants of the primary transcripts []. Synapsin I is mainly associated with regulation of neurotransmitter release from presynaptic neuron terminals []. Synapsin II, as well as being involved in neurotransmitter release, has a role in the synaptogenesis and synaptic plasticity responsible for long term potentiation []. Recent studies implicate synapsin III with a developmental role in neurite elongation and synapse formation that is distinct from the functions of synapsins I and II []. Structurally, synapsins are multidomain proteins, of which 3 domains are common to all the mammalian forms. The N-terminal `A' domain is ~30 residues long and contains a serine residue that serves as an acceptor site for protein kinase-mediated phosphorylation. This is followed by the `B' linker domain, which is ~80 residues long and is relatively poorly conserved. Domain `C' is the longest, spanning approximately 300 residues. This domain is highly conserved across all the synapsins (including those from Drosophila) and is possessed by all splice variants. The remaining six domains, D-I, are not shared by all the synapsins and differ both between the primary transcripts and the splice variants. This entry represent the ATP-grasp fold found in synapsins, which is responsible for Ca dependent ATP binding. ; PDB: 1PX2_A 1PK8_F 1AUV_B 1AUX_A 2P0A_A 1I7N_A 1I7L_A.
Probab=20.78 E-value=49 Score=22.26 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=18.5
Q ss_pred ccCCCCCCCCcccccc--CCccceEee
Q psy17601 37 RSRLGVEDFEPLKVIG--RGAFGECPK 61 (64)
Q Consensus 37 ~~~~~~~dF~~~~~iG--~G~fG~V~L 61 (64)
+......+|.++--+| .|++|+|.+
T Consensus 43 ~em~s~~~fPvVvKvG~~h~G~GKvkv 69 (203)
T PF02750_consen 43 REMLSAPRFPVVVKVGHAHAGMGKVKV 69 (203)
T ss_dssp GGGCS-SSSSEEEEESS-STTTTEEEE
T ss_pred hhhccCCCCCEEEEEccccCceeEEEE
Confidence 3345556899888899 899999954
No 339
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=20.57 E-value=1.2e+02 Score=14.25 Aligned_cols=20 Identities=25% Similarity=0.307 Sum_probs=12.4
Q ss_pred ChHHHHHHhcCCCCHHHHHH
Q psy17601 1 QAKLEESLKDESLSETQRQE 20 (64)
Q Consensus 1 ~~~Le~~l~~~~l~~~~~~~ 20 (64)
|..|=+.-.++|+|.++-+.
T Consensus 5 W~~Li~eA~~~Gls~eeir~ 24 (30)
T PF08671_consen 5 WVELIKEAKESGLSKEEIRE 24 (30)
T ss_dssp HHHHHHHHHHTT--HHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH
Confidence 55666777789999886443
Done!