BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17603
(591 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357606652|gb|EHJ65150.1| putative homocysteine S-methyltransferase isoform 1 [Danaus
plexippus]
Length = 341
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 229/410 (55%), Gaps = 103/410 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ ++DGGFS+QLS +VG +IDG PLWS+ FL T + VV TH DF++AGA+ ++TN+YQ
Sbjct: 13 HIVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGANFIITNTYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ GF+E LDL + Y+LI +V+ K+A L
Sbjct: 73 ASVEGFVEHLDLTPEQGYELITRAVELAKQARTL-------------------------- 106
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
Y+E E+ I D L+ GSVGPYGA L DGSEY G Y
Sbjct: 107 ------------YLE--------EYENYIQHDHVP--LVVGSVGPYGAHLHDGSEYDGSY 144
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ S TM EWHRPRIQAL+EAG D+LA+ETIP +EA+MLC LLRE+P+ KAWLSFSC
Sbjct: 145 ADTTSAQTMREWHRPRIQALIEAGVDLLALETIPCQEEAEMLCDLLREFPNMKAWLSFSC 204
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----IPLVV 298
KD++ I++GESF +VA+ C+ N DQL+AVGVNC P V+SL++ + + IPL+V
Sbjct: 205 KDNQSIAHGESFQKVAKKCWESNSDQLVAVGVNCCAPSFVTSLLKGINDDRPHDPIPLIV 264
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE ++ Q W
Sbjct: 265 YPNSGE----------------------KYNPQIGW------------------------ 278
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
IDRD CEPV+ ++ +WLD GV VGGCCRTYA D +++++ W
Sbjct: 279 -----IDRDKCEPVEVFIQEWLDLGVRYVGGCCRTYAADVSRIRNQVHCW 323
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 51/211 (24%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
+G +LA+ETIP +EA+MLC LLRE+PN KAWLSFSCK +N + GE + V
Sbjct: 167 AGVDLLALETIPCQEEAEMLCDLLREFPNMKAWLSFSCK-DNQSIA----HGESFQKVAK 221
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIID 421
+ + + D+ VA+ CC S +++ + I D
Sbjct: 222 KCWESNS------------DQLVAVGVNCCAP----------------SFVTSLLKGIND 253
Query: 422 GHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
P D I + YN WIDRD CEPV+ ++ +WL
Sbjct: 254 DRP------------------HDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQEWL 295
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
D GV VGGCCRTYA D +++++ W D+
Sbjct: 296 DLGVRYVGGCCRTYAADVSRIRNQVHCWRDR 326
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVVY 565
D++ I++GESF +VA+ C+ N DQL+AVGVNC P V+ L++ + + IPL+VY
Sbjct: 206 DNQSIAHGESFQKVAKKCWESNSDQLVAVGVNCCAPSFVTSLLKGINDDRPHDPIPLIVY 265
Query: 566 PNSGERYD 573
PNSGE+Y+
Sbjct: 266 PNSGEKYN 273
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
LS +VG +IDG PLWS+ FL T + VV TH DF++
Sbjct: 25 LSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRA 61
>gi|389611259|dbj|BAM19241.1| 5-methyltetrahydrofolate [Papilio polytes]
Length = 343
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 227/410 (55%), Gaps = 103/410 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DGGFS+QLS +VG +IDG PLWS+ FL T + VV TH DF++AGA +++TN+YQ
Sbjct: 13 QIVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGAHLIITNTYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ GF+E L + + Y+LI +V+ K A+ L
Sbjct: 73 ASVDGFVEHLGVSPEQGYELIVRAVELAKRALNLYL------------------------ 108
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EYRG I DD L+ GSVGPYGA L DGSEY G Y
Sbjct: 109 ------EEYRG----------------CIQDDHVP--LVVGSVGPYGAHLHDGSEYDGSY 144
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ + TM EWHRPRIQALVEAG D+LA+ETIP +EA+MLC LLRE+P+ KAWL+FSC
Sbjct: 145 ADTTTVQTMREWHRPRIQALVEAGVDLLALETIPCQEEAEMLCDLLREFPNVKAWLAFSC 204
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----IPLVV 298
KD++ I++GESF +VA+ C+ NPDQL+AVGVNC P VS+L++ + + IPL+V
Sbjct: 205 KDNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAPSYVSTLLKGINDDRPHDPIPLIV 264
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE ++ Q W
Sbjct: 265 YPNSGE----------------------KYNPQIGW------------------------ 278
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
IDRD CE V+ ++ +WLD GV VGGCCRTYA D +++++ W
Sbjct: 279 -----IDRDKCEAVEVFIQEWLDLGVRYVGGCCRTYATDVSRIRNQVHCW 323
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 98/211 (46%), Gaps = 51/211 (24%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
+G +LA+ETIP +EA+MLC LLRE+PN KAWL+FSCK +N + GE + V
Sbjct: 167 AGVDLLALETIPCQEEAEMLCDLLREFPNVKAWLAFSCK-DNQSIA----HGESFQKVAK 221
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIID 421
+ + + D+ VA+ CC S +ST + I D
Sbjct: 222 KCWEANP------------DQLVAVGVNCCAP----------------SYVSTLLKGIND 253
Query: 422 GHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
P D I + YN WIDRD CE V+ ++ +WL
Sbjct: 254 DRP------------------HDPIPLIVYPNSGEKYNPQIGWIDRDKCEAVEVFIQEWL 295
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
D GV VGGCCRTYA D +++++ W D+
Sbjct: 296 DLGVRYVGGCCRTYATDVSRIRNQVHCWRDR 326
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVVY 565
D++ I++GESF +VA+ C+ NPDQL+AVGVNC P VS L++ + + IPL+VY
Sbjct: 206 DNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAPSYVSTLLKGINDDRPHDPIPLIVY 265
Query: 566 PNSGERYD 573
PNSGE+Y+
Sbjct: 266 PNSGEKYN 273
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
LS +VG +IDG PLWS+ FL T + VV TH DF++
Sbjct: 25 LSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAG 62
>gi|91083213|ref|XP_966501.1| PREDICTED: similar to homocysteine S-methyltransferase isoform 1
[Tribolium castaneum]
gi|270006942|gb|EFA03390.1| hypothetical protein TcasGA2_TC013376 [Tribolium castaneum]
Length = 348
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 218/411 (53%), Gaps = 108/411 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ ++DGGF++QLS +V IDG LWS+ FLAT K+A++ H DF++AGAD+V+TNSYQ
Sbjct: 24 DIVVLDGGFATQLSCHVSQQIDGDVLWSARFLATDKEAIIDAHLDFLRAGADLVITNSYQ 83
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASIGGFME L L D SY+LIK SV + IA + + + P
Sbjct: 84 ASIGGFMEHLKLTKDQSYELIKESVKLAR--IACQRYNKEFPNSTPP------------- 128
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
++ GSVGPYGASL DGSEY G Y
Sbjct: 129 -------------------------------------MVVGSVGPYGASLHDGSEYTGSY 151
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFS 241
+ TM EWH PRI+ALVEAG D+LA+ETIP EA+ML LL +E+P+ KAWLSFS
Sbjct: 152 AKTTPVETMREWHIPRIRALVEAGVDLLALETIPCKIEAEMLVELLKKEFPNTKAWLSFS 211
Query: 242 CKDD-KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN---IPLV 297
+ D K ++ GESF +VAR CY++NP QL+AVGVNCV P +V +LI + + +PLV
Sbjct: 212 VRQDGKSLAYGESFQEVARYCYDLNPQQLVAVGVNCVAPRLVETLISGINKDRKNPVPLV 271
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE
Sbjct: 272 VYPNSGESY--------------------------------------------------- 280
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
V WIDRD CEPVD YV WLD GV VGGCCRTYA D ++ ++ W
Sbjct: 281 KVELGWIDRDKCEPVDTYVQKWLDLGVTWVGGCCRTYATDVSRIRQEVEKW 331
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN---IPLVVYP 566
D K ++ GESF +VAR CY++NP QL+AVGVNCV P +V LI + + +PLVVYP
Sbjct: 215 DGKSLAYGESFQEVARYCYDLNPQQLVAVGVNCVAPRLVETLISGINKDRKNPVPLVVYP 274
Query: 567 NSGERYDFHLA 577
NSGE Y L
Sbjct: 275 NSGESYKVELG 285
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW----DDKHISNGE 518
WIDRD CEPVD YV WLD GV VGGCCRTYA D ++ ++ W ++K NG+
Sbjct: 286 WIDRDKCEPVDTYVQKWLDLGVTWVGGCCRTYATDVSRIRQEVEKWKRNKEEKRHQNGQ 344
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 387 VGGCCRTYAEDTLHMKHR----LDD-WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQT 441
VG DT+ R LD + + LS +V IDG LWS+ FLAT K+A++
Sbjct: 6 VGSSSEKRHNDTMSANERDIVVLDGGFATQLSCHVSQQIDGDVLWSARFLATDKEAIIDA 65
Query: 442 HRDFIKG 448
H DF++
Sbjct: 66 HLDFLRA 72
>gi|242007818|ref|XP_002424718.1| Homocysteine S-methyltransferase, putative [Pediculus humanus
corporis]
gi|212508211|gb|EEB11980.1| Homocysteine S-methyltransferase, putative [Pediculus humanus
corporis]
Length = 312
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 218/411 (53%), Gaps = 107/411 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M +K++DGGFS+QL+ YVGDIIDG PLWS+ FL T +AV+ +H DF+KAGA+I++TNS
Sbjct: 1 MEKIKVLDGGFSTQLARYVGDIIDGDPLWSARFLYTNPEAVINSHLDFLKAGAEIIITNS 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI GF E+L D Y LIKSSV + K A RD+
Sbjct: 61 YQASISGFKEYLGCDETEGYDLIKSSVRFAKRA----------------RDL-------- 96
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
Y+E +P LIAGSVGPYGASL DGSEY G
Sbjct: 97 --------------YLE---------------TNPGARPLIAGSVGPYGASLHDGSEYTG 127
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
+Y++ V + + WHRPRI L+E G D+LA ETIPA KE + L LL+E+P QKAWLSF
Sbjct: 128 EYMDKVDKDAIMSWHRPRITGLIEEGVDLLAFETIPAFKEGEFLLELLKEFPKQKAWLSF 187
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSL---IEQLKTENIPLV 297
CK+ +H + GE+F +V + C++MN +QL+AVG NC+ P VS L I + +T+ IPL+
Sbjct: 188 QCKNSEHTAKGENFQEVIKKCWSMNKEQLVAVGCNCLSPKYVSKLFKGINENRTDKIPLI 247
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE E IP
Sbjct: 248 VYPNSGE-----EYIP-------------------------------------------- 258
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
N W + ++K +W D GV +GGCCRT A+D ++ + + W
Sbjct: 259 --NIGWFGNEKLFNMNKLFGEWFDYGVKYIGGCCRTNADDVKNISNAVKQW 307
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPL---IEQLKTENIPLVVYP 566
+ +H + GE+F +V + C++MN +QL+AVG NC+ P VS L I + +T+ IPL+VYP
Sbjct: 191 NSEHTAKGENFQEVIKKCWSMNKEQLVAVGCNCLSPKYVSKLFKGINENRTDKIPLIVYP 250
Query: 567 NSGERY 572
NSGE Y
Sbjct: 251 NSGEEY 256
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
L+ YVGDIIDG PLWS+ FL T +AV+ +H DF+K
Sbjct: 15 LARYVGDIIDGDPLWSARFLYTNPEAVINSHLDFLK 50
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 461 PNL-WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
PN+ W + ++K +W D GV +GGCCRT A+D ++ + + W+ K
Sbjct: 258 PNIGWFGNEKLFNMNKLFGEWFDYGVKYIGGCCRTNADDVKNISNAVKQWNLK 310
>gi|332374172|gb|AEE62227.1| unknown [Dendroctonus ponderosae]
Length = 334
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 215/412 (52%), Gaps = 110/412 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N+ ++DGGF++QLS +V IDG LWS+ FLA+ +AV+ TH DF++AGAD+++TN+YQ
Sbjct: 21 NIVVLDGGFATQLSCHVSQPIDGDVLWSARFLASDPEAVIDTHIDFLRAGADLIITNTYQ 80
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASIG F++ L+L + +Y LIK SV+ A+
Sbjct: 81 ASIGLFVKHLNLTEEEAYALIKKSVELAHTAV---------------------------- 112
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDP-ARDILIAGSVGPYGASLRDGSEYRGD 181
R + + P A+ LI GSVGPYGASL DGSEY G
Sbjct: 113 -------------------------ERYLQEFPDAKKPLIVGSVGPYGASLHDGSEYTGA 147
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSF 240
Y TM WH PRI AL+E G D+LAIETIP EA+ML LL+ ++P KAWL+F
Sbjct: 148 YASSTPVETMKAWHVPRIDALIEGGVDLLAIETIPCRAEAEMLVNLLKDKYPQTKAWLAF 207
Query: 241 S-CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL---KTENIPL 296
S +D K + GE F + AR CY++NPDQL+AVGVNC P ++ SL++ + ++ IP+
Sbjct: 208 SVAQDGKSTAFGEPFQETARACYDLNPDQLVAVGVNCTAPRLIESLVDGINVGRSTPIPI 267
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVYPNSGE S +M W
Sbjct: 268 VVYPNSGE----------SYNVEM------------GW---------------------- 283
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
I+RD CEPV+ Y+ WLD GV +GGCCRTYA D ++ ++ W
Sbjct: 284 -------INRDKCEPVETYIERWLDLGVTWLGGCCRTYAIDITRIRREVEKW 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL---KTENIPLVVYP 566
D K + GE F + AR CY++NPDQL+AVGVNC P ++ L++ + ++ IP+VVYP
Sbjct: 212 DGKSTAFGEPFQETARACYDLNPDQLVAVGVNCTAPRLIESLVDGINVGRSTPIPIVVYP 271
Query: 567 NSGERYDFHLA 577
NSGE Y+ +
Sbjct: 272 NSGESYNVEMG 282
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
YN WI+RD CEPV+ Y+ WLD GV +GGCCRTYA D ++ ++ W H
Sbjct: 277 YNVEMGWINRDKCEPVETYIERWLDLGVTWLGGCCRTYAIDITRIRREVEKWKQNH 332
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ + LS +V IDG LWS+ FLA+ +AV+ TH DF++
Sbjct: 29 FATQLSCHVSQPIDGDVLWSARFLASDPEAVIDTHIDFLRA 69
>gi|350420371|ref|XP_003492488.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Bombus
impatiens]
Length = 319
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 209/416 (50%), Gaps = 104/416 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M VK++DGGFS+QL+T+VGDIIDG PLW++ FL T +AV+ TH DF+KAGADI+ TN+
Sbjct: 1 MQEVKVLDGGFSTQLATHVGDIIDGDPLWTARFLVTNPNAVISTHLDFLKAGADIIQTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ S+ GF ++++L + L +VDY KEAI L
Sbjct: 61 YQTSVDGFSKYMNLSEEEGLNLFSKAVDYAKEAINL------------------------ 96
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
Y E + +I +P LIAGSVGPYGA L D SEY G
Sbjct: 97 --------------YKEEIKNK-----RNVINANP----LIAGSVGPYGACLHDASEYTG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y VSE + WHRPRIQ L+E+G D+LAIETIP +EA+ L +LL E+P+ KAWLSF
Sbjct: 134 KYCSTVSEEILMNWHRPRIQKLIESGVDMLAIETIPCKQEAKALVKLLTEFPNSKAWLSF 193
Query: 241 SCK-DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLI----EQLKTENI 294
SC D K I++G F +A CY P Q++A+GVNC+ P V+SL+ E K + I
Sbjct: 194 SCSYDGKSIADGSHFQDIALWCYKEALPGQILAIGVNCIAPQNVTSLLKGINENCKQDFI 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PLVVYPNSGE + E L + EW
Sbjct: 254 PLVVYPNSGEKYTVKQGWVKKGEGYCLQEFIHEW-------------------------- 287
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
LD GV +GGCCRT A D ++ ++ W S
Sbjct: 288 -------------------------LDLGVRYIGGCCRTNAVDVKKIRAEVEKWKS 318
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 509 WDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLI----EQLKTENIPLV 563
+D K I++G F +A CY P Q++A+GVNC+ P V+ L+ E K + IPLV
Sbjct: 197 YDGKSIADGSHFQDIALWCYKEALPGQILAIGVNCIAPQNVTSLLKGINENCKQDFIPLV 256
Query: 564 VYPNSGERY 572
VYPNSGE+Y
Sbjct: 257 VYPNSGEKY 265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS----QTNDF 454
L+T+VGDIIDG PLW++ FL T +AV+ TH DF+K QTN +
Sbjct: 15 LATHVGDIIDGDPLWTARFLVTNPNAVISTHLDFLKAGADIIQTNTY 61
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 443 RDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 502
+DFI + Y W+ + + +++ +WLD GV +GGCCRT A D +
Sbjct: 250 QDFIPLVVYPNSGEKYTVKQGWVKKGEGYCLQEFIHEWLDLGVRYIGGCCRTNAVDVKKI 309
Query: 503 KHRLDDW 509
+ ++ W
Sbjct: 310 RAEVEKW 316
>gi|389612076|dbj|BAM19564.1| 5-methyltetrahydrofolate, partial [Papilio xuthus]
Length = 285
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/306 (47%), Positives = 191/306 (62%), Gaps = 52/306 (16%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DGGFS+QLS +VG +IDG PLWS+ FL T + VV TH DF++AGA +++TN+YQ
Sbjct: 13 QIVVLDGGFSTQLSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAGAHLIITNTYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ GF+E L + + Y+LI +V+ K A L
Sbjct: 73 ASVDGFVEHLSVSPEQGYELIVRAVELAKRARTL-------------------------- 106
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
Y+E E+ I DD L+ GSVGPYGA L DGSEY G Y
Sbjct: 107 ------------YLE--------EFSGCIQDDHVP--LVVGSVGPYGAHLHDGSEYDGSY 144
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ + TM EWHRPRIQALVEAG D+LA+ETIP +EA+MLC LLRE+P+ KAWL+FSC
Sbjct: 145 ADTTTVQTMREWHRPRIQALVEAGVDLLALETIPCQEEAEMLCDLLREFPNVKAWLAFSC 204
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----IPLVV 298
KD++ I++GESF +VA+ C+ NPDQL+AVGVNC P VS+L++ + + IPL+V
Sbjct: 205 KDNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAPSYVSTLLKGINDDRPHDPIPLIV 264
Query: 299 YPNSGE 304
YPNSGE
Sbjct: 265 YPNSGE 270
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVVY 565
D++ I++GESF +VA+ C+ NPDQL+AVGVNC P VS L++ + + IPL+VY
Sbjct: 206 DNQSIAHGESFQKVAKKCWEANPDQLVAVGVNCCAPSYVSTLLKGINDDRPHDPIPLIVY 265
Query: 566 PNSGERYD 573
PNSGE+Y+
Sbjct: 266 PNSGEKYN 273
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 54/120 (45%), Gaps = 52/120 (43%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN------------------ 343
+G +LA+ETIP +EA+MLC LLRE+PN KAWL+FSCK
Sbjct: 167 AGVDLLALETIPCQEEAEMLCDLLREFPNVKAWLAFSCKDNQSIAHGESFQKVAKKCWEA 226
Query: 344 ---------------------------------IPLVVYPNSGERYDAVNARWIDRDLCE 370
IPL+VYPNSGE+Y+ WIDRD CE
Sbjct: 227 NPDQLVAVGVNCCAPSYVSTLLKGINDDRPHDPIPLIVYPNSGEKYNP-QIGWIDRDKCE 285
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
LS +VG +IDG PLWS+ FL T + VV TH DF++
Sbjct: 25 LSCHVGHVIDGDPLWSARFLHTHPNEVVNTHLDFLRAG 62
>gi|307168596|gb|EFN61654.1| Homocysteine S-methyltransferase 3 [Camponotus floridanus]
Length = 321
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 217/409 (53%), Gaps = 102/409 (24%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+K++D GFS+QLST+VGD IDG PLW++ FL T +AV TH DF++AGADI++TN+YQ
Sbjct: 2 KIKVLDAGFSTQLSTHVGDKIDGDPLWTARFLVTDPNAVFATHLDFLRAGADIILTNTYQ 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF+++L++ + S Q+I ++VDY K+A+ + Y
Sbjct: 62 ATIDGFVKYLNMTEEESLQIIGNAVDYAKDAVNV------------------------YS 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ D + ++T+ R LIAGS GPYGA L DGSEY G Y
Sbjct: 98 KEIEDNA-------------------NIVTN---RKPLIAGSCGPYGACLHDGSEYTGSY 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+VS + +WHRPRI+ L+E G D+LAIETIP +EA+ + LL+E+P AWL+FSC
Sbjct: 136 CPNVSRQFLIDWHRPRIRTLIEKGVDLLAIETIPCVREAEAIIDLLKEFPDTYAWLTFSC 195
Query: 243 KDD-KHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSL---IEQLKTENIPLV 297
+DD K I++G +F ++A CY P QL+A+G+NC+ P V++L I Q + IPLV
Sbjct: 196 RDDGKSIADGSNFQKIAMRCYKKALPGQLLAIGINCISPQYVTALLKGINQNSDDFIPLV 255
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE + E EA L + EW
Sbjct: 256 VYPNSGEKYIVSEGWKKEGEAPSLHEFIDEW----------------------------- 286
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
LD GV +GGCCRTYA D ++ ++D
Sbjct: 287 ----------------------LDLGVCYIGGCCRTYATDIKKIRSKVD 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPL---IEQLKTENIPLVVY 565
D K I++G +F ++A CY P QL+A+G+NC+ P V+ L I Q + IPLVVY
Sbjct: 198 DGKSIADGSNFQKIAMRCYKKALPGQLLAIGINCISPQYVTALLKGINQNSDDFIPLVVY 257
Query: 566 PNSGERY 572
PNSGE+Y
Sbjct: 258 PNSGEKY 264
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 401 MKHRLDD--WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
MK ++ D + + LST+VGD IDG PLW++ FL T +AV TH DF++
Sbjct: 1 MKIKVLDAGFSTQLSTHVGDKIDGDPLWTARFLVTDPNAVFATHLDFLRAG 51
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 427 SSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVA 486
S ++ + Q DFI + Y W + +++ +WLD GV
Sbjct: 233 SPQYVTALLKGINQNSDDFIPLVVYPNSGEKYIVSEGWKKEGEAPSLHEFIDEWLDLGVC 292
Query: 487 LVGGCCRTYAEDTLHMKHRLDDWDDKHI 514
+GGCCRTYA D ++ ++D ++HI
Sbjct: 293 YIGGCCRTYATDIKKIRSKVDQRQEQHI 320
>gi|383862151|ref|XP_003706547.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Megachile
rotundata]
Length = 319
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 222/414 (53%), Gaps = 105/414 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M VK++DGGFS+QL+T+V D IDG PLW++ FL T +A+V TH DF+KAGADI++TNS
Sbjct: 2 MQQVKILDGGFSTQLATHVNDTIDGDPLWTARFLVTNPEAIVATHLDFLKAGADIILTNS 61
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI GF +++++ + S L SV+Y KEA+ L
Sbjct: 62 YQASIDGFSKYMNMTEEESLNLFSKSVEYAKEAVNL------------------------ 97
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
++ D V+++ ++++P LIAGS+GPYGA L DGSEY G
Sbjct: 98 ----------FKKD-VKNLKN---------VSENP----LIAGSIGPYGACLHDGSEYTG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y V+E + +WHRPRI+ L+ +G D+LAIETIP KEA+ L +LL+E+P+ KAWLSF
Sbjct: 134 KYCSLVTEEILMDWHRPRIRQLIASGVDLLAIETIPCKKEAEALVKLLKEFPNIKAWLSF 193
Query: 241 SCKDD-KHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQL----KTENI 294
SC++D ++I++G +F VA CY Q++AVG+NC+ P VS L+ + K E +
Sbjct: 194 SCRNDGENIADGSNFQNVAMQCYKEALQGQILAVGMNCIAPQNVSPLLRGINANNKQEIV 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PLVVYPNSGE + ++ L + + EW N
Sbjct: 254 PLVVYPNSGETYTVETGWMKTNDSCSLNQFIHEWLNL----------------------- 290
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
GV +GGCCRT+AED + ++ + +W
Sbjct: 291 ----------------------------GVRYIGGCCRTHAEDVVKIRAEVQNW 316
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLIEQL----KTENIPLVV 564
D ++I++G +F VA CY Q++AVG+NC+ P VSPL+ + K E +PLVV
Sbjct: 198 DGENIADGSNFQNVAMQCYKEALQGQILAVGMNCIAPQNVSPLLRGINANNKQEIVPLVV 257
Query: 565 YPNSGERYDFHLADEKNN 582
YPNSGE Y K N
Sbjct: 258 YPNSGETYTVETGWMKTN 275
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
L+T+V D IDG PLW++ FL T +A+V TH DF+K
Sbjct: 16 LATHVNDTIDGDPLWTARFLVTNPEAIVATHLDFLKA 52
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
W+ + +++++ +WL+ GV +GGCCRT+AED + ++ + +W
Sbjct: 271 WMKTNDSCSLNQFIHEWLNLGVRYIGGCCRTHAEDVVKIRAEVQNW 316
>gi|328782294|ref|XP_003250116.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Apis
mellifera]
Length = 320
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 216/415 (52%), Gaps = 105/415 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M V ++DGGFS+QL+T+V D IDG PLW++ FL T +A++ TH DF+KAGADI++TN+
Sbjct: 1 MQEVMVLDGGFSTQLATHVDDTIDGDPLWTARFLVTNPNAIISTHLDFLKAGADIILTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI GF +++++ + S + +VDY KEA+ L +DI G+V
Sbjct: 61 YQASIDGFSKYMNITEEESLDIFSKAVDYAKEAVNLYK-----------KDIENKGNV-- 107
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
I +P LIAGS+GPYGA L D SEY G
Sbjct: 108 ------------------------------INANP----LIAGSIGPYGACLHDASEYSG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y +V+E + WHRPRIQ L++ G ILAIETIP +EA+ L +LL+E+P+ KAWLSF
Sbjct: 134 KYCSNVTEEFLINWHRPRIQKLIDNGVHILAIETIPCKQEAEALIKLLKEFPNSKAWLSF 193
Query: 241 S-CKDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLI----EQLKTENI 294
S C D K I++G +F Q+A CY P Q++A+GVNC P V+ L+ E K E +
Sbjct: 194 SCCNDGKSIADGTNFQQIAMQCYREALPKQILAIGVNCTAPQNVTKLLKGINENNKQEFV 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PLVVYPNSGE
Sbjct: 254 PLVVYPNSGE-------------------------------------------------- 263
Query: 355 RYDAVNARWIDRDLCE-PVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+Y N W +D E + +++ +WL GV +GGCCRT A D ++ ++ W
Sbjct: 264 KYTIENG-WTIKDEEECSLHEFIYEWLTLGVRYIGGCCRTNATDIKKIRSEVEKW 317
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLI----EQLKTENIPLVV 564
D K I++G +F Q+A CY P Q++A+GVNC P V+ L+ E K E +PLVV
Sbjct: 198 DGKSIADGTNFQQIAMQCYREALPKQILAIGVNCTAPQNVTKLLKGINENNKQEFVPLVV 257
Query: 565 YPNSGERY 572
YPNSGE+Y
Sbjct: 258 YPNSGEKY 265
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
L+T+V D IDG PLW++ FL T +A++ TH DF+K
Sbjct: 15 LATHVDDTIDGDPLWTARFLVTNPNAIISTHLDFLKA 51
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 458 YNSPNLWIDRDLCE-PVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
Y N W +D E + +++ +WL GV +GGCCRT A D ++ ++ W
Sbjct: 265 YTIENGWTIKDEEECSLHEFIYEWLTLGVRYIGGCCRTNATDIKKIRSEVEKW 317
>gi|307193338|gb|EFN76200.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 321
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 215/413 (52%), Gaps = 104/413 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ +K++DGGFS+QLST+VGD IDG PLW++ FL T +AV TH DF++AGADI+ TN+
Sbjct: 1 MSKIKVLDGGFSTQLSTHVGDRIDGDPLWTARFLITDPNAVFATHLDFLRAGADIIQTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+I GF++++ + + S ++I+ +VDY K A V
Sbjct: 61 YQATIDGFVKYVGISEEESLEIIRRAVDYAKNA------------------------VNA 96
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
Y + D E+ M+ + P LIAGS GPYGA DGSEY G
Sbjct: 97 YTKEIAD------------DESIMSR------NKP----LIAGSCGPYGACQHDGSEYTG 134
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y VS+ + WHRPR++AL+E G +LAIETIP +EA + LL+E+P +AWLSF
Sbjct: 135 SYGTRVSKEFLINWHRPRVRALLEEGVSLLAIETIPCEREADAVVELLKEFPDARAWLSF 194
Query: 241 SCKDD-KHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----- 293
SC+DD K++++G SF + A CY N P Q+IAVGVNC+ P V+SL++ + N
Sbjct: 195 SCRDDGKNLADGTSFRETAVRCYKNALPGQIIAVGVNCIAPQHVTSLLKGVNKGNTDDNL 254
Query: 294 IPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSG 353
IPLVVYPNSGE L E EA L + EW
Sbjct: 255 IPLVVYPNSGEKYLVTEGWKKCGEAPSLHEFIDEW------------------------- 289
Query: 354 ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
LD GV +GGCCRT A D +K ++D
Sbjct: 290 --------------------------LDLGVRYIGGCCRTCAVDVKRIKSKVD 316
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
Query: 510 DDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-----IPLV 563
D K++++G SF + A CY N P Q+IAVGVNC+ P V+ L++ + N IPLV
Sbjct: 199 DGKNLADGTSFRETAVRCYKNALPGQIIAVGVNCIAPQHVTSLLKGVNKGNTDDNLIPLV 258
Query: 564 VYPNSGERY 572
VYPNSGE+Y
Sbjct: 259 VYPNSGEKY 267
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS----QTNDF 454
LST+VGD IDG PLW++ FL T +AV TH DF++ QTN +
Sbjct: 15 LSTHVGDRIDGDPLWTARFLITDPNAVFATHLDFLRAGADIIQTNTY 61
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 475 KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
+++ +WLD GV +GGCCRT A D +K ++D
Sbjct: 284 EFIDEWLDLGVRYIGGCCRTCAVDVKRIKSKVD 316
>gi|383862211|ref|XP_003706577.1| PREDICTED: homocysteine S-methyltransferase 1-like [Megachile
rotundata]
Length = 325
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 218/414 (52%), Gaps = 104/414 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+NVK++DGGFS+QLST+VG+ IDG PLW++ FLAT +AV TH DF++AGADI+ TN+
Sbjct: 1 MSNVKILDGGFSAQLSTHVGEKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI G M++L + S L+ +V ++A+
Sbjct: 61 YQASIPGLMKYLSKTEEESINLLHQAVKLAQKAV-------------------------- 94
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
DY++ + D + LIAGS GPYGASL DGSEY G
Sbjct: 95 ------------NDYLKEIEGNN---------DIENKSPLIAGSCGPYGASLHDGSEYNG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y + TM +WHR RI ALV++G D+LA+ET+P +EA++L LL+E+P+ KAWL+F
Sbjct: 134 AYGKATPRDTMMQWHRSRINALVDSGIDLLALETVPCYQEAEVLVELLKEYPNVKAWLTF 193
Query: 241 SC-KDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQLKTEN----I 294
SC ++ ++I +G +F +VA CY M P Q+IA+GVNC+ P VS L+ + + I
Sbjct: 194 SCERNSQNIVDGSNFQEVATNCYKMALPGQIIAIGVNCIAPKDVSPLLRNINKDTGNQFI 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PL+ YPNSGE + + K W
Sbjct: 254 PLIAYPNSGEI----------------------FSSTKGW-------------------- 271
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
I + C P + ++ +WL+ GV +GGCCR YAE+ ++ ++++
Sbjct: 272 ---------IKDESCPPFENFIPEWLEIGVQYLGGCCRMYAENIKSIRREINNF 316
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 415 YVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG--SQTNDFLRDYNSPNLWIDRDLCEP 472
Y + DG +Y AT +D ++Q HR I D L P L E
Sbjct: 121 YGASLHDGSEYNGAYGKATPRDTMMQWHRSRINALVDSGIDLLALETVPCYQEAEVLVEL 180
Query: 473 VDKY--VTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM 530
+ +Y V WL C R + ++I +G +F +VA CY M
Sbjct: 181 LKEYPNVKAWL------TFSCER----------------NSQNIVDGSNFQEVATNCYKM 218
Query: 531 N-PDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVVYPNSGERY 572
P Q+IA+GVNC+ P VSPL+ + + IPL+ YPNSGE +
Sbjct: 219 ALPGQIIAIGVNCIAPKDVSPLLRNINKDTGNQFIPLIAYPNSGEIF 265
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
++S WI + C P + ++ +WL+ GV +GGCCR YAE+ ++ ++++ K
Sbjct: 265 FSSTKGWIKDESCPPFENFIPEWLEIGVQYLGGCCRMYAENIKSIRREINNFKKK 319
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
LST+VG+ IDG PLW++ FLAT +AV TH DF++
Sbjct: 15 LSTHVGEKIDGDPLWTARFLATNPNAVYATHLDFLRA 51
>gi|322800889|gb|EFZ21732.1| hypothetical protein SINV_01371 [Solenopsis invicta]
Length = 318
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 218/412 (52%), Gaps = 104/412 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ ++++DGGFS+QLST+VG+ IDG PLW++ FL T AV TH DF++AGADI+ TN+
Sbjct: 1 MSKIRVLDGGFSTQLSTHVGEKIDGDPLWTARFLITDPKAVFATHLDFLRAGADIIETNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+I GF++ L + + S ++I+ +VDY K+A+ + +
Sbjct: 61 YQATIDGFVKHLGISKEESLEIIRKAVDYAKDAVNVYS---------------------- 98
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
E G+ E+V R LIAGS GPYGA L DGSEY G
Sbjct: 99 --------KEIEGN--ENVKN---------------RKPLIAGSCGPYGACLHDGSEYTG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y +VS + +WHRPRI+AL+E G D+LAIETIP +EA+ + LL+E+P +AWLSF
Sbjct: 134 SYCINVSREFLIDWHRPRIRALLEKGVDLLAIETIPCVREAEAVIDLLKEFPDTQAWLSF 193
Query: 241 SCKDD-KHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----I 294
SC+DD K +++G +F ++A CY N P Q++A+G+NC+ P V++L++ + I
Sbjct: 194 SCRDDGKSLADGSNFQEIAVRCYKNALPGQILAIGINCIAPQFVTTLLQDINKGKSDDLI 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PLVVYPNSGE + E E+ L + EW
Sbjct: 254 PLVVYPNSGEKYIVSEGWKKEGESASLHEFIDEW-------------------------- 287
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
LD GV +GGCCRTYA D ++ ++D
Sbjct: 288 -------------------------LDFGVRYIGGCCRTYATDIKQIRSKVD 314
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVV 564
D K +++G +F ++A CY N P Q++A+G+NC+ P V+ L++ + IPLVV
Sbjct: 198 DGKSLADGSNFQEIAVRCYKNALPGQILAIGINCIAPQFVTTLLQDINKGKSDDLIPLVV 257
Query: 565 YPNSGERY 572
YPNSGE+Y
Sbjct: 258 YPNSGEKY 265
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
LST+VG+ IDG PLW++ FL T AV TH DF++
Sbjct: 15 LSTHVGEKIDGDPLWTARFLITDPKAVFATHLDFLRAG 52
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 475 KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
+++ +WLD GV +GGCCRTYA D ++ ++D
Sbjct: 282 EFIDEWLDFGVRYIGGCCRTYATDIKQIRSKVD 314
>gi|322800888|gb|EFZ21731.1| hypothetical protein SINV_00334 [Solenopsis invicta]
Length = 322
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 210/401 (52%), Gaps = 107/401 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+VK++DGGFS QLS +VG IDG PLW++ FL T +AV TH DF++AGADI+ TN+YQ
Sbjct: 6 HVKILDGGFSGQLSRHVGTKIDGDPLWTARFLKTNVNAVHTTHLDFLRAGADIIETNTYQ 65
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ G M +L+ S L ++V K A+ ++ AR+
Sbjct: 66 ASLPGMMRYLNTSERESLDLFTTAVSLAKRAV-----------EEYARE----------- 103
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+H+S P + LIAGS GPYGA L + SEY G Y
Sbjct: 104 --------------KHIS--------------PEQRPLIAGSCGPYGAYLHNASEYTGSY 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+++S+ + +WHRPR++AL++AG D+LA+ETIP KEA+ L +LL+E+PH +AWLSFSC
Sbjct: 136 GKNMSQQELMDWHRPRVKALLDAGVDLLALETIPCIKEAEALLKLLKEYPHARAWLSFSC 195
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL------KTENIPL 296
+DDK IS+G F ++A CY P Q+IAVGVNC+ P V+ L++ + K + IPL
Sbjct: 196 RDDKFISDGSVFQEMAVHCYRTLPLQIIAVGVNCIDPRHVTPLLKNINANALSKQDFIPL 255
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVYPN G C EW P+
Sbjct: 256 VVYPNRGGS----------------CSATGEW------------------TAVPD----- 276
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D L P +++WLD GV +GGCC+ +AED
Sbjct: 277 --------DHSLNLP----ISEWLDLGVRYIGGCCKIFAED 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 6/66 (9%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL------KTENIPLV 563
DDK IS+G F ++A CY P Q+IAVGVNC+ P V+PL++ + K + IPLV
Sbjct: 197 DDKFISDGSVFQEMAVHCYRTLPLQIIAVGVNCIDPRHVTPLLKNINANALSKQDFIPLV 256
Query: 564 VYPNSG 569
VYPN G
Sbjct: 257 VYPNRG 262
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 405 LDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS----QTNDFLRDYN 459
LD SG LS +VG IDG PLW++ FL T +AV TH DF++ +TN +
Sbjct: 10 LDGGFSGQLSRHVGTKIDGDPLWTARFLKTNVNAVHTTHLDFLRAGADIIETNTYQASLP 69
Query: 460 SPNLWIDRDLCEPVDKYVT 478
+++ E +D + T
Sbjct: 70 GMMRYLNTSERESLDLFTT 88
>gi|332021681|gb|EGI62037.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 318
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 212/412 (51%), Gaps = 104/412 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ +K++DGGFS+QLST++ + I+G PLW++ FL T AV TH DF++AGADI+ TN+
Sbjct: 1 MSKIKVLDGGFSTQLSTHLDEKINGDPLWTARFLITKPKAVFATHLDFLRAGADIIETNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF++ L + + S ++I+ +VDY K+A+ + + I +D R+
Sbjct: 61 YQATTDGFVKHLGITEEESLEIIRKAVDYAKDAVNVYSKE--IENDKNVRN--------- 109
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R LIAGS GPYGA L DGSEY G
Sbjct: 110 ------------------------------------RKPLIAGSCGPYGACLHDGSEYIG 133
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y +VS + WHRPRI+AL+E G D+LAIETIP +EA+ + LL+E+P +AWLSF
Sbjct: 134 SYCINVSREFLINWHRPRIRALLERGVDLLAIETIPCVREAEAIIDLLKEFPDTQAWLSF 193
Query: 241 SCKDD-KHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----I 294
SC++D K +++G +F ++A CY N P Q++A+GVNC+ P V++L++ + I
Sbjct: 194 SCRNDGKSLADGNNFQELAVRCYKNALPGQILAIGVNCIAPQCVTTLLQDINKNKLNDLI 253
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PL+VYPNSGE E E L + EW
Sbjct: 254 PLIVYPNSGEKYTVSEGWKKEGEIASLHEFIDEW-------------------------- 287
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
LD GV +GGCCRTYA D ++ ++D
Sbjct: 288 -------------------------LDLGVRYIGGCCRTYAMDIKQIRSKVD 314
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G +LAIETIP +EA+ + LL+E+P+ +AWLSFSC+ + L G + + R
Sbjct: 159 GVDLLAIETIPCVREAEAIIDLLKEFPDTQAWLSFSCRNDGKSLA----DGNNFQELAVR 214
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDG 422
L + L GV + C T ++ K++L+D +
Sbjct: 215 CYKNALPGQI-------LAIGVNCIAPQCVTTLLQDIN-KNKLNDLI------------- 253
Query: 423 HPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD 482
PL +V + Y W + +++ +WLD
Sbjct: 254 -PL------------IVYPNSG-----------EKYTVSEGWKKEGEIASLHEFIDEWLD 289
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLD 507
GV +GGCCRTYA D ++ ++D
Sbjct: 290 LGVRYIGGCCRTYAMDIKQIRSKVD 314
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVV 564
D K +++G +F ++A CY N P Q++A+GVNC+ P V+ L++ + IPL+V
Sbjct: 198 DGKSLADGNNFQELAVRCYKNALPGQILAIGVNCIAPQCVTTLLQDINKNKLNDLIPLIV 257
Query: 565 YPNSGERY 572
YPNSGE+Y
Sbjct: 258 YPNSGEKY 265
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
LST++ + I+G PLW++ FL T AV TH DF++
Sbjct: 15 LSTHLDEKINGDPLWTARFLITKPKAVFATHLDFLRAG 52
>gi|380013277|ref|XP_003690691.1| PREDICTED: homocysteine S-methyltransferase-like [Apis florea]
Length = 320
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 210/411 (51%), Gaps = 103/411 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
NVK++DGGF +QLST+V + +DG PLW+S FL T +AV TH DF+KAGADI+ TN+YQ
Sbjct: 2 NVKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQ 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI M+ L + + S +L+ +V K A+
Sbjct: 62 ASIPSLMKHLSISEEESIKLLHKAVHLAKTAV---------------------------- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
DY + V ++ E ++ +I S GPYGASL DGSEY G Y
Sbjct: 94 ----------NDYTKEVIDSNDVE---------NKNPMIVASCGPYGASLHDGSEYNGAY 134
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ + +WH+ RI A++ AG D+LA+ETIP +EA+ + LLRE+P+ KAWLSFSC
Sbjct: 135 GKITPRENIIQWHKSRIDAIINAGIDLLALETIPCYQEAEAIVELLREYPNTKAWLSFSC 194
Query: 243 -KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLV 297
++ + I +G +F +++ CY P Q++A+GVNC+ P V+ L++ + + IPL+
Sbjct: 195 ERNTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPKDVTPLLKNINMGSGNDFIPLI 254
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
YPNSGE + PN G
Sbjct: 255 AYPNSGE------------------------------------------IYSPNEG---- 268
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
WI + C P++ ++ +WL+ G+ +GGCCR YAE+ ++ ++++
Sbjct: 269 -----WIKNESCAPLESFIPEWLEFGIRYLGGCCRMYAENIKSIRKAVNNF 314
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK----TENIPLVVY 565
+ + I +G +F +++ CY P Q++A+GVNC+ P V+PL++ + + IPL+ Y
Sbjct: 197 NTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPKDVTPLLKNINMGSGNDFIPLIAY 256
Query: 566 PNSGERY 572
PNSGE Y
Sbjct: 257 PNSGEIY 263
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N+G +LA+ETIP +EA+ + LLRE YPN+
Sbjct: 156 NAGIDLLALETIPCYQEAEAIVELLRE---------------------YPNT-------- 186
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDII 420
W+ CE + + D + E + L + +
Sbjct: 187 KAWLSFS-CERNTQKIVDG------------SNFQELSTRCYKTLPGQIVAIGVNCIAPK 233
Query: 421 DGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDW 480
D PL K+ + + DFI + Y+ WI + C P++ ++ +W
Sbjct: 234 DVTPLL--------KNINMGSGNDFIPLIAYPNSGEIYSPNEGWIKNESCAPLESFIPEW 285
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
L+ G+ +GGCCR YAE+ ++ ++++
Sbjct: 286 LEFGIRYLGGCCRMYAENIKSIRKAVNNF 314
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
LST+V + +DG PLW+S FL T +AV TH DF+K
Sbjct: 14 LSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKA 50
>gi|307193337|gb|EFN76199.1| Homocysteine S-methyltransferase 2 [Harpegnathos saltator]
Length = 323
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 203/398 (51%), Gaps = 103/398 (25%)
Query: 5 KLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
K++DGGFSSQLS +VG D PLW++ FL T AV TH D+++AGA+I+ TN+YQAS
Sbjct: 6 KVLDGGFSSQLSRHVGAKFDDDPLWTARFLQTNPSAVYNTHLDYLRAGAEIIETNTYQAS 65
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
+ G M++L++ D S L+ +V+ K+A+
Sbjct: 66 VPGLMKYLNISMDESLALLAKAVELAKQAV------------------------------ 95
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
V ++ E T + L+AGS GPYGA L D SEY G Y +
Sbjct: 96 -----------VTYMKENTTND------KQGGEKPLVAGSCGPYGACLHDKSEYTGAYGK 138
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+S + +WHRPRIQAL++AG D+LA+ETIP ++EA L LLRE+P +AWLSFSC+D
Sbjct: 139 SMSRQELMDWHRPRIQALLDAGVDLLALETIPYAEEADALVELLREFPRARAWLSFSCRD 198
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-----IPLVVY 299
D+HI++G F +VA CY P+Q++AVGVNCV P V +L++ + E IPL+VY
Sbjct: 199 DRHIADGSDFREVAVRCYRALPEQVVAVGVNCVPPNYVKTLLQGINKEERSQDFIPLIVY 258
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PN G C +E + P+
Sbjct: 259 PNRG----------------------------------GCYSETDEWIPVPDD------- 277
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ ++ V DWLD GV +GGCC+ +AED
Sbjct: 278 ----------QRINLPVLDWLDLGVRYIGGCCKVFAED 305
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 17/109 (15%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDW------------DDKHISNGESFTQVARTCY 528
LD GV L+ YAE+ + L ++ DD+HI++G F +VA CY
Sbjct: 157 LDAGVDLLALETIPYAEEADALVELLREFPRARAWLSFSCRDDRHIADGSDFREVAVRCY 216
Query: 529 NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-----IPLVVYPNSGERY 572
P+Q++AVGVNCV P V L++ + E IPL+VYPN G Y
Sbjct: 217 RALPEQVVAVGVNCVPPNYVKTLLQGINKEERSQDFIPLIVYPNRGGCY 265
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
Y+ + WI + ++ V DWLD GV +GGCC+ +AED
Sbjct: 265 YSETDEWIPVPDDQRINLPVLDWLDLGVRYIGGCCKVFAED 305
>gi|114052514|ref|NP_001040249.1| homocysteine S-methyltransferase [Bombyx mori]
gi|87248513|gb|ABD36309.1| homocysteine S-methyltransferase [Bombyx mori]
Length = 325
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 201/347 (57%), Gaps = 52/347 (14%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DGGFS+QL+ + G DG PL S+ FL T V+ TH DF++AG+DI+ TN+YQA
Sbjct: 11 VFVLDGGFSTQLTCHAGHTADGDPLGSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S+ G ++ L+L + SY+LIKS+V++ + ARD+
Sbjct: 71 SVDGLVKHLNLTVEESYELIKSAVEFAR----------------TARDL----------- 103
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
Y++ E+ ++ R LIAGSVGPYGA L D SEY G+Y
Sbjct: 104 -----------YLQECQESNLS----------GRKPLIAGSVGPYGAYLHDTSEYTGNYA 142
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++ ++ T+ WHR RIQALVEAG DILA ETIP KEA+ L +L+E+P+ KAWLSFSCK
Sbjct: 143 DNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEALVEILKEYPNMKAWLSFSCK 202
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE---NIPLVVYP 300
++ +++GE+F VA+ C+ NPDQLIA+GVN P +V+ L + + + +I + YP
Sbjct: 203 NETSLAHGENFQNVAKKCWKSNPDQLIAIGVNGCSPKIVTELFKDINNDQETSIQYITYP 262
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCKTENIPL 346
NSGE S + + L L+ EW + ++ C+T ++ +
Sbjct: 263 NSGETYDHKLGWTESDKCESLHNLVAEWLDLGVRYIGGCCRTNDVDI 309
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 62/142 (43%), Gaps = 51/142 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE------------------- 342
+G ILA ETIP KEA+ L +L+E+PN KAWLSFSCK E
Sbjct: 164 AGVDILAFETIPCQKEAEALVEILKEYPNMKAWLSFSCKNETSLAHGENFQNVAKKCWKS 223
Query: 343 -------------------------------NIPLVVYPNSGERYDAVNARWIDRDLCEP 371
+I + YPNSGE YD W + D CE
Sbjct: 224 NPDQLIAIGVNGCSPKIVTELFKDINNDQETSIQYITYPNSGETYDH-KLGWTESDKCES 282
Query: 372 VDKYVTDWLDEGVALVGGCCRT 393
+ V +WLD GV +GGCCRT
Sbjct: 283 LHNLVAEWLDLGVRYIGGCCRT 304
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE---NIPLVVYP 566
++ +++GE+F VA+ C+ NPDQLIA+GVN P +V+ L + + + +I + YP
Sbjct: 203 NETSLAHGENFQNVAKKCWKSNPDQLIAIGVNGCSPKIVTELFKDINNDQETSIQYITYP 262
Query: 567 NSGERYDFHLA-DEKNNC 583
NSGE YD L E + C
Sbjct: 263 NSGETYDHKLGWTESDKC 280
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 494
W + D CE + V +WLD GV +GGCCRT
Sbjct: 274 WTESDKCESLHNLVAEWLDLGVRYIGGCCRT 304
>gi|66501633|ref|XP_623182.1| PREDICTED: homocysteine S-methyltransferase 2-like [Apis mellifera]
Length = 320
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 208/411 (50%), Gaps = 103/411 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
NVK++DGGF +QLST+V + +DG PLW+S FL T +AV TH DF+KAGADI+ TN+YQ
Sbjct: 2 NVKILDGGFGAQLSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKAGADIIETNTYQ 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI M+ L + + S +L+ +V K A+
Sbjct: 62 ASIPSLMKHLSISKEESIKLLHKAVHLAKTAV---------------------------- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
DY + V E ++ +I S GPYGASL DGSEY G Y
Sbjct: 94 ----------NDYTKEVINNNDVE---------NKNPMIVASCGPYGASLHDGSEYNGAY 134
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ + +WH+ RI A++ AG D+LA+ETIP +EA+ + +LRE+P+ KAWLSFSC
Sbjct: 135 GKITPRENIIQWHKSRIDAIINAGIDLLALETIPCYQEAEAIIEVLREYPNTKAWLSFSC 194
Query: 243 -KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLV 297
K+ + I +G +F +++ CY P Q++A+GVNC+ P V+ L++ + + IPL+
Sbjct: 195 EKNTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPKDVTPLLKNINMGSGNDFIPLI 254
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
YPNSGE + PN G
Sbjct: 255 AYPNSGE------------------------------------------IYSPNEG---- 268
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
WI + C P++ ++ +WL+ G+ +GGCCR YAE+ ++ ++++
Sbjct: 269 -----WIKNESCAPLESFIPEWLEFGIRYLGGCCRMYAENIKSIRKAVNNF 314
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK----TENIPLVVY 565
+ + I +G +F +++ CY P Q++A+GVNC+ P V+PL++ + + IPL+ Y
Sbjct: 197 NTQKIVDGSNFQELSTRCYKTLPGQIVAIGVNCIAPKDVTPLLKNINMGSGNDFIPLIAY 256
Query: 566 PNSGERY 572
PNSGE Y
Sbjct: 257 PNSGEIY 263
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 50/209 (23%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N+G +LA+ETIP +EA+ + +LRE YPN+
Sbjct: 156 NAGIDLLALETIPCYQEAEAIIEVLRE---------------------YPNT-------- 186
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDII 420
W+ CE + + D + E + L + +
Sbjct: 187 KAWLSFS-CEKNTQKIVDG------------SNFQELSTRCYKTLPGQIVAIGVNCIAPK 233
Query: 421 DGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDW 480
D PL K+ + + DFI + Y+ WI + C P++ ++ +W
Sbjct: 234 DVTPLL--------KNINMGSGNDFIPLIAYPNSGEIYSPNEGWIKNESCAPLESFIPEW 285
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
L+ G+ +GGCCR YAE+ ++ ++++
Sbjct: 286 LEFGIRYLGGCCRMYAENIKSIRKAVNNF 314
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
LST+V + +DG PLW+S FL T +AV TH DF+K
Sbjct: 14 LSTHVNEKVDGDPLWTSKFLVTNPNAVYATHLDFLKA 50
>gi|170046469|ref|XP_001850787.1| homocysteine S-methyltransferase [Culex quinquefasciatus]
gi|167869210|gb|EDS32593.1| homocysteine S-methyltransferase [Culex quinquefasciatus]
Length = 324
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 202/418 (48%), Gaps = 113/418 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DGGF++QLS +VG +DG PLWS+ F AT +AV +TH DF++AGA +MTN+YQA
Sbjct: 8 VTVLDGGFATQLSVHVGKHVDGDPLWSARFNATNPNAVYKTHLDFLEAGAQCIMTNTYQA 67
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI G+ E+LDL +S QLIKS+
Sbjct: 68 SIEGYGEYLDLSEAASIQLIKST------------------------------------- 90
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
V A MA L D L+ S+GPYGA L DGSEY G+Y
Sbjct: 91 ---------------VKLAHMARTKHLAESDIREIPLVVASIGPYGAHLHDGSEYTGEYA 135
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
++VS T+ +WHR RI A +EAG D+L IETIP EA + ++ E +PH K W+SF C
Sbjct: 136 DYVSANTIQKWHRSRIDACLEAGVDVLGIETIPCKMEADAMLEMMTEDYPHVKFWISFQC 195
Query: 243 KDDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSSLIEQLK-----TEN 293
KD H++ GE+F + +N + D LIA+GVNCV P V+ L + E
Sbjct: 196 KDSAHLARGENFAETVSYIWNKAKLLGNDNLIALGVNCVHPQFVTPLFRAVNEKRSPVER 255
Query: 294 IPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSG 353
IPL+VYPNSGE + ++ET
Sbjct: 256 IPLIVYPNSGE-VYSVET------------------------------------------ 272
Query: 354 ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG 411
W ++ C P+++YV W+D G +GGCCRTYA D +K + +G
Sbjct: 273 --------GWQGKEDCVPLEQYVPQWIDLGARFIGGCCRTYARDIKRIKQAVTALQTG 322
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 510 DDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSPLIEQLK-----TENI 560
D H++ GE+F + +N + D LIA+GVNCV P V+PL + E I
Sbjct: 197 DSAHLARGENFAETVSYIWNKAKLLGNDNLIALGVNCVHPQFVTPLFRAVNEKRSPVERI 256
Query: 561 PLVVYPNSGERYDFHLA-DEKNNCV 584
PL+VYPNSGE Y K +CV
Sbjct: 257 PLIVYPNSGEVYSVETGWQGKEDCV 281
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 504
Y+ W ++ C P+++YV W+D G +GGCCRTYA D +K
Sbjct: 268 YSVETGWQGKEDCVPLEQYVPQWIDLGARFIGGCCRTYARDIKRIKQ 314
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK-GSQ 450
+ + LS +VG +DG PLWS+ F AT +AV +TH DF++ G+Q
Sbjct: 15 FATQLSVHVGKHVDGDPLWSARFNATNPNAVYKTHLDFLEAGAQ 58
>gi|157107160|ref|XP_001649650.1| 5-methyltetrahydrofolate:homocysteine methyltransferase [Aedes
aegypti]
gi|108879631|gb|EAT43856.1| AAEL004728-PA [Aedes aegypti]
Length = 315
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 203/412 (49%), Gaps = 113/412 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M V ++DGGF++QLS +VG IDG PLWS+ F AT +AV +TH DF++AGA+ +MTN+
Sbjct: 1 MDRVTVLDGGFATQLSVHVGKHIDGDPLWSARFNATNPNAVFKTHLDFLEAGAECIMTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI G+ME+LDL S QLIK++
Sbjct: 61 YQASIEGYMEYLDLSETGSLQLIKAT---------------------------------- 86
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
V A MA + ++ R L+ SVGPYGA L DGSEY G
Sbjct: 87 ------------------VKLAQMARTKYMADNEVRRVPLVVASVGPYGAHLHDGSEYTG 128
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ-MLCRLLREWPHQKAWLS 239
+Y ++V+ T+ +WHR RI A +EAG D+L IETIP EA+ ML + ++PH + W+S
Sbjct: 129 EYADYVTVDTIQKWHRARIDACLEAGVDVLGIETIPCKMEAEAMLDMMTEDYPHVRFWIS 188
Query: 240 FSCKDDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSSLIEQLK----- 290
F CKD+ HI++GE+F +N + L+A+GVNCV P V+ L +
Sbjct: 189 FQCKDNAHIAHGENFADTVSNLWNKAKLFGNENLVAIGVNCVHPQFVTPLFRAVNEKRPT 248
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
E IPL+VYPNSGE + ++ET
Sbjct: 249 KERIPLIVYPNSGE-VYSVET--------------------------------------- 268
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
W ++ C P++ YV W++ G +GGCCRTYA D +K
Sbjct: 269 -----------GWQGKEDCVPLEHYVPQWVELGARYIGGCCRTYARDIERIK 309
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 510 DDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSPLIEQLK-----TENI 560
D+ HI++GE+F +N + L+A+GVNCV P V+PL + E I
Sbjct: 193 DNAHIAHGENFADTVSNLWNKAKLFGNENLVAIGVNCVHPQFVTPLFRAVNEKRPTKERI 252
Query: 561 PLVVYPNSGERYDFHLA-DEKNNCV 584
PL+VYPNSGE Y K +CV
Sbjct: 253 PLIVYPNSGEVYSVETGWQGKEDCV 277
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 51/205 (24%)
Query: 302 SGEHILAIETIPASKEAQ-MLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G +L IETIP EA+ ML + ++P+ + W+SF CK + GE + D V
Sbjct: 153 AGVDVLGIETIPCKMEAEAMLDMMTEDYPHVRFWISFQCKDN-----AHIAHGENFADTV 207
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDI 419
+ W L + +E + +G C
Sbjct: 208 SNLWNKAKL----------FGNENLVAIGVNCV--------------------------- 230
Query: 420 IDGHPLW-SSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVT 478
HP + + F A + + I + + Y+ W ++ C P++ YV
Sbjct: 231 ---HPQFVTPLFRAVNEKRPTKERIPLIVYPNSGEV---YSVETGWQGKEDCVPLEHYVP 284
Query: 479 DWLDEGVALVGGCCRTYAEDTLHMK 503
W++ G +GGCCRTYA D +K
Sbjct: 285 QWVELGARYIGGCCRTYARDIERIK 309
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS 449
+ + LS +VG IDG PLWS+ F AT +AV +TH DF++
Sbjct: 11 FATQLSVHVGKHIDGDPLWSARFNATNPNAVFKTHLDFLEAG 52
>gi|195437797|ref|XP_002066826.1| GK24684 [Drosophila willistoni]
gi|194162911|gb|EDW77812.1| GK24684 [Drosophila willistoni]
Length = 331
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 208/419 (49%), Gaps = 108/419 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
++ V + DGGF +Q++ +VG+ +DG PLWS+ F +T AV+ TH DF++ GADI++TN+
Sbjct: 3 LSRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNSTNMSAVINTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQAS+ G+ME+L+LD + S +LIK++V A
Sbjct: 63 YQASVEGYMEYLELDEEQSIELIKNTVRLAHIA--------------------------- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
+ Y+ EA +A P LI S+GP+GA L DGSEY G
Sbjct: 96 -----------KEKYLTECYEAKLAV--------PEGFPLIIASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y + V T+ +WHR RI+A VEAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADFVPAKTITDWHRQRIEACVEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNP-----DQLIAVGVNCVRPLMVSSLIEQLKT--- 291
F CKD+ +++GESF A + +++ D+ +AVGVNCV P V++L + L
Sbjct: 197 FQCKDETSLAHGESFADAANSIWDILSERNALDKCLAVGVNCVHPKFVTALFKSLNGERS 256
Query: 292 --ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
E IPLVVYPNSGE
Sbjct: 257 VDEQIPLVVYPNSGE--------------------------------------------- 271
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
YD +N W R+ C P+ YV +W G ++GGCCRTYA D H+ + +W
Sbjct: 272 -----VYDVLNG-WQGREHCVPLANYVPEWAQLGAKIIGGCCRTYARDIRHIGEAIRNW 324
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 50/212 (23%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G LAIETIP EA+ L +L ++P+ K W++F CK E GE + DA
Sbjct: 161 AGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCKDET-----SLAHGESFADAA 215
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDI 419
N+ W D L ++ LD ++ V
Sbjct: 216 NSIW---------------------------------DILSERNALDKCLAVGVNCV--- 239
Query: 420 IDGHPLW-SSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVT 478
HP + ++ F + + V + + + Y+ N W R+ C P+ YV
Sbjct: 240 ---HPKFVTALFKSLNGERSVDEQIPLVVYPNSGEV---YDVLNGWQGREHCVPLANYVP 293
Query: 479 DWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
+W G ++GGCCRTYA D H+ + +W+
Sbjct: 294 EWAQLGAKIIGGCCRTYARDIRHIGEAIRNWN 325
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-----DQLIA 537
E ALV C Y + + + D + +++GESF A + +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ETSLAHGESFADAANSIWDILSERNALDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKTE-----NIPLVVYPNSGERYD 573
VGVNCV P V+ L + L E IPLVVYPNSGE YD
Sbjct: 234 VGVNCVHPKFVTALFKSLNGERSVDEQIPLVVYPNSGEVYD 274
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VG+ +DG PLWS+ F +T AV+ TH DF++
Sbjct: 17 MTVHVGNSVDGDPLWSARFNSTNMSAVINTHLDFLQ 52
>gi|332031666|gb|EGI71120.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 317
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 212/407 (52%), Gaps = 96/407 (23%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ +K+++GG ++QL G DG PLW++ +L T +A++ TH DF++AG++I+ T +
Sbjct: 1 MSEIKVLEGG-ATQLFINAGGETDGDPLWAARYLVTKPEAILATHLDFLRAGSNIIRTVT 59
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+I GF+++L + + S ++I+ +VDY KEA+ +
Sbjct: 60 YQATIDGFVKYLGITKEESLEIIRKAVDYAKEAVKI------------------------ 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
Y + + E ++ +T+ LIAGS GPYGASL DGSEY G
Sbjct: 96 --------------YTKEI------ENNKNVTNQKP---LIAGSCGPYGASLHDGSEYTG 132
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y VS + +WHRPRIQAL+E G D+LA+ETIP + EA+ + LL+E+P +AWLSF
Sbjct: 133 SYCTSVSREFLMDWHRPRIQALLEKGVDVLAMETIPCAYEAEAIIDLLKEFPDARAWLSF 192
Query: 241 SCKDDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
SCKD K +++G +F + A CY N P Q++A+G NC+ P V+SL + + +
Sbjct: 193 SCKDGKSLADGSNFQETAVRCYKNAAPGQILAIGTNCIAPKYVTSLFQGINRDK------ 246
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
+ IPLVVYPNSGE+Y
Sbjct: 247 ----------------------------------------SDDFIPLVVYPNSGEKYTES 266
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
W + +++ +WL+ GV +GGCCRT A D ++ ++D
Sbjct: 267 EG-WNKEGDAPTLHEFIDEWLNLGVRYIGGCCRTCATDVKLIRAKVD 312
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVV 564
D K +++G +F + A CY N P Q++A+G NC+ P V+ L + + + IPLVV
Sbjct: 196 DGKSLADGSNFQETAVRCYKNAAPGQILAIGTNCIAPKYVTSLFQGINRDKSDDFIPLVV 255
Query: 565 YPNSGERY 572
YPNSGE+Y
Sbjct: 256 YPNSGEKY 263
>gi|340712661|ref|XP_003394874.1| PREDICTED: homocysteine S-methyltransferase-like [Bombus
terrestris]
Length = 321
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 213/412 (51%), Gaps = 104/412 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++K++DGGFSSQLST++ IDG PLW++ FLAT DAV TH DF++AGADI+ T++YQ
Sbjct: 2 DIKILDGGFSSQLSTHINAKIDGDPLWTARFLATNPDAVYATHLDFLRAGADIIETSTYQ 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ M++L + + +L+ +V+ K A+
Sbjct: 62 ASVPDLMKYLSVTEEEGIKLLHKAVNLAKNAV---------------------------- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+Y++ + E D ++ +IAGS GPYGASL DGSEY G Y
Sbjct: 94 ----------NNYIKEIIENN---------DIENKNPIIAGSCGPYGASLHDGSEYNGIY 134
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ T+ EWH+ RI ALV+A ++LA+ETIP +EA+ L LLRE+P+ KAWLSFSC
Sbjct: 135 GKTTPRDTIIEWHKSRINALVDADINLLALETIPCYQEAEALIELLREYPNIKAWLSFSC 194
Query: 243 -KDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQLKT----ENIPL 296
KD ++I +G +F ++A CY P Q++A+GVNC+ P V+ L++ + T E IPL
Sbjct: 195 KKDSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAPENVTPLLKNINTGPANEFIPL 254
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
+ YPNSGE L K W+ NS
Sbjct: 255 IAYPNSGEIYL----------------------QSKGWIKNG------------NSAS-- 278
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+ ++ +WL+ G+ +GGCCR YAED ++ ++++
Sbjct: 279 ---------------FENFIPEWLELGIRYLGGCCRMYAEDIKSIRKEVNNF 315
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLIEQLKT----ENIPLVV 564
D ++I +G +F ++A CY P Q++A+GVNC+ P V+PL++ + T E IPL+
Sbjct: 197 DSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAPENVTPLLKNINTGPANEFIPLIA 256
Query: 565 YPNSGERY 572
YPNSGE Y
Sbjct: 257 YPNSGEIY 264
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ S LST++ IDG PLW++ FLAT DAV TH DF++
Sbjct: 10 FSSQLSTHINAKIDGDPLWTARFLATNPDAVYATHLDFLRA 50
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHIS 515
WI + ++ +WL+ G+ +GGCCR YAED ++ +++++ K S
Sbjct: 270 WIKNGNSASFENFIPEWLELGIRYLGGCCRMYAEDIKSIRKEVNNFNRKRES 321
>gi|345495637|ref|XP_001605767.2| PREDICTED: homocysteine S-methyltransferase-like [Nasonia
vitripennis]
Length = 323
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 212/414 (51%), Gaps = 106/414 (25%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
++VK+IDGGFS+QL T+VG++IDG PLW+S FL + DAV QTH D+++AG+ ++ T +Y
Sbjct: 3 SDVKVIDGGFSTQLVTHVGEVIDGDPLWTSRFLYSNPDAVFQTHLDYLRAGSHVIETATY 62
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QASI G++++LD + + QLIK++V+ K+A+ R+ +
Sbjct: 63 QASIPGYVKYLDRTEEEALQLIKTAVELAKKAV-------RVYKE--------------- 100
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG- 180
E +G V + + ++AGS+GPY A L D SEY G
Sbjct: 101 --------EIKGKDVSN------------------PEPMVAGSIGPYAAYLHDCSEYTGG 134
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y S ++ EWHRPR +AL+ G D+LAIETIP ++EA+ L LL+++P KAWLSF
Sbjct: 135 SYANIESMDSIVEWHRPRFEALINGGVDLLAIETIPCAREAEALVGLLKQYPDTKAWLSF 194
Query: 241 SCK-DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----IP 295
SCK D K I++G SF Q CY Q++A GVNC+ P V+ L++ + + IP
Sbjct: 195 SCKVDGKSIADGSSFKQTVLKCYKAASGQIVACGVNCLAPRSVTPLLKSINEKEINQFIP 254
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
+V YPNSGE +
Sbjct: 255 MVAYPNSGE--------------------------------------------------K 264
Query: 356 YDAVNARW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
Y + W ID D P +++V DWLD GV +G CCRT ++D + + W
Sbjct: 265 YSSTTFSWTIDNDF-HPPEEFVKDWLDIGVRYIGSCCRTGSKDIERIAAEVKSW 317
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN----IPLVVY 565
D K I++G SF Q CY Q++A GVNC+ P V+PL++ + + IP+V Y
Sbjct: 199 DGKSIADGSSFKQTVLKCYKAASGQIVACGVNCLAPRSVTPLLKSINEKEINQFIPMVAY 258
Query: 566 PNSGERY-----------DFHLADE 579
PNSGE+Y DFH +E
Sbjct: 259 PNSGEKYSSTTFSWTIDNDFHPPEE 283
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
L T+VG++IDG PLW+S FL + DAV QTH D+++
Sbjct: 16 LVTHVGEVIDGDPLWTSRFLYSNPDAVFQTHLDYLRA 52
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 465 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHIS 515
ID D P +++V DWLD GV +G CCRT ++D + + W ++
Sbjct: 274 IDNDF-HPPEEFVKDWLDIGVRYIGSCCRTGSKDIERIAAEVKSWTKSRLT 323
>gi|158296509|ref|XP_316898.4| AGAP008537-PA [Anopheles gambiae str. PEST]
gi|157014744|gb|EAA12151.5| AGAP008537-PA [Anopheles gambiae str. PEST]
Length = 333
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 206/420 (49%), Gaps = 110/420 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M NV ++DGGF++QLS +VG IDG PLWS+ F AT +AV +TH DF++AGA+ +MTN+
Sbjct: 8 MTNVTVLDGGFATQLSVHVGKSIDGDPLWSARFNATDPNAVFRTHLDFLEAGAEAIMTNT 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI G++E L L D+S LIKS+V R AR+ +A GP
Sbjct: 68 YQASIEGYVEHLHLTEDTSLNLIKSTV----------------RVAQMARNHFLAK--GP 109
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
T++ L+ S+GPYGA L DGSEY G
Sbjct: 110 -------------------------------TNEQRSVPLLVASIGPYGAHLHDGSEYTG 138
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y V T+ +WHRPRI A +EAG D+L IETIP EA+ L +L E+P + W+S
Sbjct: 139 RYAADVCADTIQKWHRPRIDACLEAGVDVLGIETIPCKMEAEALLDMLCDEYPTVRFWIS 198
Query: 240 FSCKDDKHISNGESFTQVARTCY----NMNPDQLIAVGVNCVRPLMVSSLI-----EQLK 290
F CKD++H++NGE F + + + L+A+GVNCV P +V+ L ++L
Sbjct: 199 FQCKDNQHLANGELFADTVNSLWAKARSRRAKNLLALGVNCVHPQIVTPLFRSVNEKKLP 258
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
IPL+VYPNSGE VY
Sbjct: 259 AVRIPLIVYPNSGE-------------------------------------------VY- 274
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
V W R+ C P++ YV W+D G +GGCCRTYA D +K + + S
Sbjct: 275 -------TVEDGWQGREDCVPLEHYVPQWIDLGARFIGGCCRTYARDIQRIKQTVINHAS 327
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 510 DDKHISNGESFTQVARTCY----NMNPDQLIAVGVNCVRPLMVSPLI-----EQLKTENI 560
D++H++NGE F + + + L+A+GVNCV P +V+PL ++L I
Sbjct: 203 DNQHLANGELFADTVNSLWAKARSRRAKNLLALGVNCVHPQIVTPLFRSVNEKKLPAVRI 262
Query: 561 PLVVYPNSGERY 572
PL+VYPNSGE Y
Sbjct: 263 PLIVYPNSGEVY 274
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 504
Y + W R+ C P++ YV W+D G +GGCCRTYA D +K
Sbjct: 274 YTVEDGWQGREDCVPLEHYVPQWIDLGARFIGGCCRTYARDIQRIKQ 320
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ + LS +VG IDG PLWS+ F AT +AV +TH DF++
Sbjct: 18 FATQLSVHVGKSIDGDPLWSARFNATDPNAVFRTHLDFLEA 58
>gi|347967937|ref|XP_563710.4| AGAP002469-PA [Anopheles gambiae str. PEST]
gi|333468235|gb|EAL40920.4| AGAP002469-PA [Anopheles gambiae str. PEST]
Length = 1123
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 206/418 (49%), Gaps = 119/418 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDGGFS+QL+ +VG +D PLW+S F AT AV++TH D++KAGAD ++TN+YQA
Sbjct: 792 VIVIDGGFSTQLTEHVGAKLDKDPLWTSRFNATNPAAVLETHLDYLKAGADCILTNTYQA 851
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI G+M+FLDL+ D S +LI++SV+ + AR R
Sbjct: 852 SIEGYMDFLDLNEDESLKLIRASVELAR--------RARTR------------------- 884
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
Y + +E+ S W + GS+GPYGA L DGSEY G Y
Sbjct: 885 -------YLAEKLENKSHKI--PW-------------VVGSIGPYGAHLHDGSEYTGAYA 922
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
EHV + +WHRPRI A+VEAG D LAIETIP EA+ L LL + P + W+SF C
Sbjct: 923 EHVPANRLQKWHRPRINAIVEAGVDALAIETIPCRMEAEALLDLLSADHPTVRFWISFQC 982
Query: 243 KDDKHISNGESFTQVARTCYN-----MNPDQLIAVGVNCVRPLMVSSLIEQL-------- 289
+D +++GE+F + +N NP+ L+A+GVNCV P V L+ +
Sbjct: 983 RDGASLAHGENFAETVLGLWNRARQLANPN-LLAIGVNCVNPQHVLPLLRSVHELLQQRA 1041
Query: 290 -----KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++E IPL+VYPNSGEH
Sbjct: 1042 AGTPPESERIPLIVYPNSGEH--------------------------------------- 1062
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
+DA + W + P++ Y+ W++ GV VGGCCRT A D +K
Sbjct: 1063 -----------WDAAASCWRGAENLTPLETYLPQWVEMGVKFVGGCCRTNARDIKRIK 1109
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 19/82 (23%)
Query: 510 DDKHISNGESFTQVARTCYN-----MNPDQLIAVGVNCVRPLMVSPLIEQL--------- 555
D +++GE+F + +N NP+ L+A+GVNCV P V PL+ +
Sbjct: 984 DGASLAHGENFAETVLGLWNRARQLANPN-LLAIGVNCVNPQHVLPLLRSVHELLQQRAA 1042
Query: 556 ----KTENIPLVVYPNSGERYD 573
++E IPL+VYPNSGE +D
Sbjct: 1043 GTPPESERIPLIVYPNSGEHWD 1064
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 503
W + P++ Y+ W++ GV VGGCCRT A D +K
Sbjct: 1070 WRGAENLTPLETYLPQWVEMGVKFVGGCCRTNARDIKRIK 1109
>gi|332021679|gb|EGI62035.1| Homocysteine S-methyltransferase ybgG [Acromyrmex echinatior]
Length = 322
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 201/399 (50%), Gaps = 107/399 (26%)
Query: 5 KLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
K++DGGFS QLS +V IDG PLW++ FL T DA+ TH DF++AGADI+ TN+YQAS
Sbjct: 10 KILDGGFSGQLSRHVNTKIDGDPLWTARFLKTNVDAIYATHLDFLRAGADIIETNTYQAS 69
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
+ G M++L++ S L+K+SV+ ++A+ DD R+ I P
Sbjct: 70 VPGMMKYLNISEHESLNLLKTSVNLARKAV-----------DDYIREESIPFESRP---- 114
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
++AGS GPYGA L +GSEY G Y +
Sbjct: 115 -----------------------------------MVAGSCGPYGAYLHNGSEYTGSYGK 139
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
++S + +WHRPR++AL+ A D+LA ETIP +EA+ + LL+E+PH +AWLSFSC+D
Sbjct: 140 NISRQELIDWHRPRVKALLNADTDLLAFETIPCVEEAEAILELLKEYPHARAWLSFSCRD 199
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL------KTENIPLVV 298
+ +S+G F A CY P Q++AVGVNC+ P V+ L++ + + + IPLVV
Sbjct: 200 GQFMSDGSVFQNTAVRCYRTLPLQIVAVGVNCIDPKYVTPLLKGINESASSEQDFIPLVV 259
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPN G S+S
Sbjct: 260 YPNRGG-------------------------------SYS-------------------- 268
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
N WI ++ +++WLD G+ +GGCC+ +AED
Sbjct: 269 TNGEWIAVQDDHSLNLPMSEWLDLGIRYIGGCCKIFAED 307
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL------KTENIPLV 563
D + +S+G F A CY P Q++AVGVNC+ P V+PL++ + + + IPLV
Sbjct: 199 DGQFMSDGSVFQNTAVRCYRTLPLQIVAVGVNCIDPKYVTPLLKGINESASSEQDFIPLV 258
Query: 564 VYPNSGERY 572
VYPN G Y
Sbjct: 259 VYPNRGGSY 267
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 405 LDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
LD SG LS +V IDG PLW++ FL T DA+ TH DF++
Sbjct: 12 LDGGFSGQLSRHVNTKIDGDPLWTARFLKTNVDAIYATHLDFLRA 56
>gi|350420352|ref|XP_003492482.1| PREDICTED: homocysteine S-methyltransferase-like [Bombus impatiens]
Length = 321
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 209/412 (50%), Gaps = 104/412 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++K++DGGFSSQLST++G IDG PLW++ FLAT +AV TH DF++AGADI+ T++YQ
Sbjct: 2 DIKILDGGFSSQLSTHIGAKIDGDPLWTARFLATNPNAVYATHLDFLRAGADIIETSTYQ 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ M++L + + +L+ + + K A+
Sbjct: 62 ASVPDLMKYLSVTEEEGIKLLHKAANLAKNAV---------------------------- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
DY++ + + D ++ +IAGS GPYGASL DGSEY G Y
Sbjct: 94 ----------NDYIKEIIDNN---------DIENKNPIIAGSCGPYGASLHDGSEYNGTY 134
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ T+ EWH+ RI ALV+A ++LA+ETIP +EA+ L LLRE+P+ KAWLSFSC
Sbjct: 135 GKTTPRDTIIEWHKSRINALVDADINLLALETIPCCQEAEALIELLREYPNIKAWLSFSC 194
Query: 243 -KDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQLKT----ENIPL 296
KD ++I +G +F ++A CY P Q++A+GVNC+ P V+ L++ + T E IPL
Sbjct: 195 KKDSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAPENVTPLLKNINTGPANEFIPL 254
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
+ YPNSGE L E + + + EW
Sbjct: 255 IAYPNSGEIYLQSEGWIKNGNSASFENFIPEW---------------------------- 286
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
L+ G+ +GGCCR YAED ++ ++++
Sbjct: 287 -----------------------LELGIRYLGGCCRMYAEDIKSIRKEVNNF 315
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLIEQLKT----ENIPLVV 564
D ++I +G +F ++A CY P Q++A+GVNC+ P V+PL++ + T E IPL+
Sbjct: 197 DSQNIVDGSNFQEIALRCYKTALPGQIVAIGVNCIAPENVTPLLKNINTGPANEFIPLIA 256
Query: 565 YPNSGERY 572
YPNSGE Y
Sbjct: 257 YPNSGEIY 264
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ S LST++G IDG PLW++ FLAT +AV TH DF++
Sbjct: 10 FSSQLSTHIGAKIDGDPLWTARFLATNPNAVYATHLDFLRA 50
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHIS 515
WI + ++ +WL+ G+ +GGCCR YAED ++ ++++ K S
Sbjct: 270 WIKNGNSASFENFIPEWLELGIRYLGGCCRMYAEDIKSIRKEVNNFKRKRES 321
>gi|195484287|ref|XP_002090630.1| GE12692 [Drosophila yakuba]
gi|194176731|gb|EDW90342.1| GE12692 [Drosophila yakuba]
Length = 331
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 205/419 (48%), Gaps = 108/419 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V L DGGF +Q++ +VGD +DG PLWSS F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLLKDGGFGTQMTVHVGDSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ+S+ G+ME+L+LD + S +LI+++V A
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIRNTVRLAHIA--------------------------- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
+ Y+ +A +A P LI S+GP+GA L DGSEY G
Sbjct: 96 -----------KERYLTECYQAQLAM--------PEGYPLIIASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y ++V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK---- 290
F CKD+ +++GE+F +++ D+ +A+GVNCV P V+ L + L
Sbjct: 197 FQCKDENTLAHGETFADATNAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKSLNGDRE 256
Query: 291 -TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
E IPLVVYPNSGE VY
Sbjct: 257 VGEQIPLVVYPNSGE-------------------------------------------VY 273
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
D VN W ++ C P+ YV +W G ++GGCCRTYA D H+ + DW
Sbjct: 274 -------DVVNG-WQGKEHCVPLANYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIRDW 324
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ENTLAHGETFADATNAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYD 274
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W ++ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVVNGWQGKEHCVPLANYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIRDWN 325
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VGD +DG PLWSS F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGDSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|194759566|ref|XP_001962018.1| GF14647 [Drosophila ananassae]
gi|190615715|gb|EDV31239.1| GF14647 [Drosophila ananassae]
Length = 331
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 203/419 (48%), Gaps = 108/419 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VG+ +DG PLWSS F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPSAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ+S+ G+ME+L+LD + S +LI+++V A
Sbjct: 63 YQSSVEGYMEYLELDEEQSIELIRNTVRLAHIA--------------------------- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
E ++E ++ P LI S+GP+GA L DGSEY G
Sbjct: 96 -------------------KERYLSECYQAQLSVPEGYPLIIASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y ++V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADYVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT--- 291
F CKD+ +++GE+F A +++ D+ +AVGVNCV P V+ L + L
Sbjct: 197 FQCKDESTLAHGETFADAATAIWDLLAERNAQDKCLAVGVNCVHPKFVTPLFKSLNGERG 256
Query: 292 --ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
E IPLVVYPNSGE
Sbjct: 257 ADEQIPLVVYPNSGE--------------------------------------------- 271
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
YD N W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW
Sbjct: 272 -----TYDVDNG-WQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIRDW 324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ESTLAHGETFADAATAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKTE-----NIPLVVYPNSGERYD 573
VGVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 VGVNCVHPKFVTPLFKSLNGERGADEQIPLVVYPNSGETYD 274
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVDNGWQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIRDWN 325
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VG+ +DG PLWSS F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGNSVDGDPLWSSRFNATNPSAIISTHLDFLQNGADIILTNTYQS 65
>gi|195580010|ref|XP_002079849.1| GD21797 [Drosophila simulans]
gi|194191858|gb|EDX05434.1| GD21797 [Drosophila simulans]
Length = 331
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 207/422 (49%), Gaps = 114/422 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VGD +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV---DYVKEAIALEATHARIRSDDPARDILIAGS 117
YQ+S+ G+ME+L+LD + S +LIK++V KE E A++
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQL-------------- 108
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
S+++G LI S+GP+GA L DGSE
Sbjct: 109 ------SVQEGYP-----------------------------LIIASIGPFGAHLHDGSE 133
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKA 236
Y G Y + V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K
Sbjct: 134 YTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKF 193
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK- 290
W++F CKD+ +++GE+F A +++ D+ +A+GVNCV P V+ L + L
Sbjct: 194 WVAFQCKDENTLAHGETFADAANAIWDLLADRNAQDKCLAIGVNCVHPKFVTPLFKSLNG 253
Query: 291 ----TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E IPLVVYPNSGE
Sbjct: 254 DREVGEQIPLVVYPNSGE------------------------------------------ 271
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
VY D VN W R+ C P+ YV +W G ++GGCCRTYA D H+ +
Sbjct: 272 -VY-------DVVNG-WQGREHCVPLASYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIR 322
Query: 407 DW 408
DW
Sbjct: 323 DW 324
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ENTLAHGETFADAANAIWDLLADRNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYD 274
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVVNGWQGREHCVPLASYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIRDWN 325
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VGD +DG PLWS+ F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|20129603|ref|NP_609920.1| CG10621 [Drosophila melanogaster]
gi|7298506|gb|AAF53725.1| CG10621 [Drosophila melanogaster]
gi|157816384|gb|ABV82186.1| FI01821p [Drosophila melanogaster]
Length = 331
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 207/422 (49%), Gaps = 114/422 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VGD +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV---DYVKEAIALEATHARIRSDDPARDILIAGS 117
YQ+S+ G+ME+L+LD + S +LIK++V KE E A++
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQL-------------- 108
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
S+++G LI S+GP+GA L DGSE
Sbjct: 109 ------SVQEGYP-----------------------------LIIASIGPFGAHLHDGSE 133
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKA 236
Y G Y + V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K
Sbjct: 134 YTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKF 193
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK- 290
W++F CKD+ +++GE+F A +++ D+ +A+GVNCV P V+ L + L
Sbjct: 194 WVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKSLNG 253
Query: 291 ----TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E IPLVVYPNSGE
Sbjct: 254 DREVGEQIPLVVYPNSGE------------------------------------------ 271
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
VY D VN W R+ C P+ YV +W G ++GGCCRTYA D H+ +
Sbjct: 272 -VY-------DVVNG-WQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIR 322
Query: 407 DW 408
DW
Sbjct: 323 DW 324
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ENTLAHGETFADAANAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYD 274
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVVNGWQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIRDWN 325
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VGD +DG PLWS+ F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|91080855|ref|XP_971795.1| PREDICTED: similar to homocysteine S-methyltransferase [Tribolium
castaneum]
gi|270005414|gb|EFA01862.1| hypothetical protein TcasGA2_TC007465 [Tribolium castaneum]
Length = 313
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 179/303 (59%), Gaps = 53/303 (17%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ L+DG F QLS YV +DG PLWS+ LA+ +AV++ H D+IKAG DI+ TNSYQ
Sbjct: 7 KIVLLDGSFGFQLSKYVSKSLDGDPLWSARSLASDPEAVIRVHLDYIKAGCDIIETNSYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ GFM++L+L + SY L+K SV K AI + ++ ++ G P
Sbjct: 67 ASVPGFMKYLNLSKEESYNLVKKSVVLAKTAI-----------ERAQKEGILQGDAKP-- 113
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
LIAGSVGPYGA L DGSEY G Y
Sbjct: 114 -------------------------------------LIAGSVGPYGAYLHDGSEYNGYY 136
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ +S ++H+ RI AL+E G D+LAIETIP+ KEA+++ +L++E+P KAWLSFSC
Sbjct: 137 TDRISREEFVDYHKSRIDALIEGGVDLLAIETIPSKKEAEIIVQLIKEYPDIKAWLSFSC 196
Query: 243 KDDKH-ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPN 301
+ + ++G++F A +CY +NPDQ++AVGVNC+ P V L++++ +IPL+VY N
Sbjct: 197 QTEGACTAHGDNFKDAATSCYKLNPDQILAVGVNCIAPHAVEPLLKEIT--DIPLIVYAN 254
Query: 302 SGE 304
SGE
Sbjct: 255 SGE 257
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 49/137 (35%)
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE-------------------- 342
G +LAIETIP+ KEA+++ +L++E+P+ KAWLSFSC+TE
Sbjct: 160 GVDLLAIETIPSKKEAEIIVQLIKEYPDIKAWLSFSCQTEGACTAHGDNFKDAATSCYKL 219
Query: 343 --------------------------NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
+IPL+VY NSGE+YD + W + CE +++YV
Sbjct: 220 NPDQILAVGVNCIAPHAVEPLLKEITDIPLIVYANSGEKYDP-DLGWDNN--CEKLEEYV 276
Query: 377 TDWLDEGVALVGGCCRT 393
WL+ GV +GGCCR
Sbjct: 277 PVWLNLGVKYIGGCCRV 293
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Query: 515 SNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYDF 574
++G++F A +CY +NPDQ++AVGVNC+ P V PL++++ +IPL+VY NSGE+YD
Sbjct: 204 AHGDNFKDAATSCYKLNPDQILAVGVNCIAPHAVEPLLKEIT--DIPLIVYANSGEKYDP 261
Query: 575 HLADEKNNCVK 585
L + NNC K
Sbjct: 262 DLGWD-NNCEK 271
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGS----QTNDF 454
LS YV +DG PLWS+ LA+ +AV++ H D+IK +TN +
Sbjct: 19 LSKYVSKSLDGDPLWSARSLASDPEAVIRVHLDYIKAGCDIIETNSY 65
>gi|195035505|ref|XP_001989218.1| GH11602 [Drosophila grimshawi]
gi|193905218|gb|EDW04085.1| GH11602 [Drosophila grimshawi]
Length = 328
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 196/405 (48%), Gaps = 108/405 (26%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF +Q++ +VG+ +DG PLWS+ F AT AV+ TH DF++ GAD+++TN+YQ S+ G
Sbjct: 10 DGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILTNTYQTSVEG 69
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
+ME+L+LD S +LIK++V A T Y A L
Sbjct: 70 YMEYLELDEQESIELIKNTVQLAHVAKEKYLTEC-------------------YEAQLEV 110
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
Y LI S+GP+GA L DGSEY G+Y ++V+
Sbjct: 111 NEGYP---------------------------LIIASIGPFGAHLHDGSEYTGEYADYVA 143
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
T+ +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++F CKD+
Sbjct: 144 PKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCKDES 203
Query: 247 HISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK-----TENIPL 296
+++GE F A +++ D +AVGVNCV P V+ L + L E IPL
Sbjct: 204 RLAHGEEFADAANAIWDILRERKALDNCLAVGVNCVHPKFVTPLFKSLNGERSVEEQIPL 263
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVYPNSGE Y
Sbjct: 264 VVYPNSGE--------------------------------------------------VY 273
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
D V W R+ C P++KYV +W G ++GGCCRTYA D H+
Sbjct: 274 D-VTTGWQGREHCVPLEKYVPEWAQLGAKIIGGCCRTYARDIRHI 317
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 48/203 (23%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
+G LAIETIP EA+ L +L ++P+ K W++F CK E+ + E DA N
Sbjct: 161 AGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCKDES----RLAHGEEFADAAN 216
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDII 420
A W D L + LD+ ++ V
Sbjct: 217 AIW---------------------------------DILRERKALDNCLAVGVNCV---- 239
Query: 421 DGHPLW-SSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTD 479
HP + + F + + V+ + + + Y+ W R+ C P++KYV +
Sbjct: 240 --HPKFVTPLFKSLNGERSVEEQIPLVVYPNSGEV---YDVTTGWQGREHCVPLEKYVPE 294
Query: 480 WLDEGVALVGGCCRTYAEDTLHM 502
W G ++GGCCRTYA D H+
Sbjct: 295 WAQLGAKIIGGCCRTYARDIRHI 317
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE F A +++ D +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ESRLAHGEEFADAANAIWDILRERKALDNCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLK-----TENIPLVVYPNSGERYD 573
VGVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 VGVNCVHPKFVTPLFKSLNGERSVEEQIPLVVYPNSGEVYD 274
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VG+ +DG PLWS+ F AT AV+ TH DF++
Sbjct: 17 MTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQ 52
>gi|195387968|ref|XP_002052664.1| GJ17677 [Drosophila virilis]
gi|194149121|gb|EDW64819.1| GJ17677 [Drosophila virilis]
Length = 331
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 201/410 (49%), Gaps = 110/410 (26%)
Query: 1 MANVKLI--DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
M + +L+ DGGF +Q++ +VG+ +DG PLWS+ F AT AV+ TH DF++ GAD+++T
Sbjct: 1 MGSTRLLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADMILT 60
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
N+YQ S+ G+ME+L+LD S +LIK++V A
Sbjct: 61 NTYQTSVEGYMEYLELDEQESIELIKNTVRLAHIA------------------------- 95
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
+ Y+ EA +A P LI S+GP+GA L DGSEY
Sbjct: 96 -------------KEKYLTECYEAQLAV--------PEGFPLIIASIGPFGAHLHDGSEY 134
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAW 237
G Y ++V T+ +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W
Sbjct: 135 TGSYADYVEPKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPEVKFW 194
Query: 238 LSFSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT- 291
++F CKD+ +++GE F + A +++ D+ +A+GVNCV P V+ L + L
Sbjct: 195 VAFQCKDESTLAHGEDFAEAANAIWDILRERKALDKCLALGVNCVHPKFVTPLFKSLNGE 254
Query: 292 ----ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLV 347
E IPLVVYPNSGE
Sbjct: 255 RTADEQIPLVVYPNSGE------------------------------------------- 271
Query: 348 VYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
YD V W R+ C P++ YV +W G ++GGCCRTYA D
Sbjct: 272 -------VYD-VTTGWQGREHCVPLENYVPEWTQLGAKIIGGCCRTYARD 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y E + + D + +++GE F + A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPEVKFWVAFQCKD--ESTLAHGEDFAEAANAIWDILRERKALDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKTE-----NIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 LGVNCVHPKFVTPLFKSLNGERTADEQIPLVVYPNSGEVYD 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 48/199 (24%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G LAIETIP EA+ L +L ++P K W++F CK E+ GE + +A
Sbjct: 161 AGVDALAIETIPCQMEAEALVEMLCDDYPEVKFWVAFQCKDESTLA-----HGEDFAEAA 215
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDI 419
NA W D L E AL C + +H K +V+
Sbjct: 216 NAIW--------------DILRERKAL--DKCLALGVNCVHPK-----FVT--------- 245
Query: 420 IDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTD 479
PL+ S D + + + + Y+ W R+ C P++ YV +
Sbjct: 246 ----PLFKSLNGERTADEQIP----LVVYPNSGEV---YDVTTGWQGREHCVPLENYVPE 294
Query: 480 WLDEGVALVGGCCRTYAED 498
W G ++GGCCRTYA D
Sbjct: 295 WTQLGAKIIGGCCRTYARD 313
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VG+ +DG PLWS+ F AT AV+ TH DF++
Sbjct: 17 MTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQ 52
>gi|195344946|ref|XP_002039037.1| GM17050 [Drosophila sechellia]
gi|194134167|gb|EDW55683.1| GM17050 [Drosophila sechellia]
Length = 331
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 210/419 (50%), Gaps = 108/419 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VGD +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ+S+ G+ME+++LD + S ++ +K + L A I
Sbjct: 63 YQSSVDGYMEYMELDEEQS-------IELIKNTVRL----AHI----------------- 94
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A R SE Y E +S + E + LI S+GP+GA L DGSEY G
Sbjct: 95 --AKERYLSEC---YQEQLS---VQEGYPLII----------ASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y + V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADFVPAKEITDWHRGRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK---- 290
F CKD+K +++GE+F+ A +++ D+ +A+GVNCV P V+ L + L
Sbjct: 197 FQCKDEKTLAHGETFSDAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKSLNGDRE 256
Query: 291 -TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
E IPLVVYPNSGE VY
Sbjct: 257 VGEQIPLVVYPNSGE-------------------------------------------VY 273
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
D VN W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW
Sbjct: 274 -------DVVNG-WQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIRDW 324
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D +K +++GE+F+ A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--EKTLAHGETFSDAANAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYD 274
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W R+ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVVNGWQGREHCVPLANYVPEWAQLGAKVIGGCCRTYARDVRHIGEAIRDWN 325
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VGD +DG PLWS+ F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|125986259|ref|XP_001356893.1| GA10443 [Drosophila pseudoobscura pseudoobscura]
gi|195148675|ref|XP_002015293.1| GL19626 [Drosophila persimilis]
gi|54645219|gb|EAL33959.1| GA10443 [Drosophila pseudoobscura pseudoobscura]
gi|194107246|gb|EDW29289.1| GL19626 [Drosophila persimilis]
Length = 331
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 207/419 (49%), Gaps = 108/419 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VG+ +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPAAIINTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQAS+ G+ME+L+LD D S +LI+++V A
Sbjct: 63 YQASVEGYMEYLELDEDQSIELIRNTVRLAHIA--------------------------- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
+ Y+ +A +A P LI S+GP+GA L DGSEY G
Sbjct: 96 -----------KEKYLTECYQAQLAV--------PEGYPLIIASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y ++V T+ +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADYVPAKTITDWHRIRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK---- 290
F CKD+ +++GE+F A ++M D+ +AVGVNCV P V+SL + L
Sbjct: 197 FQCKDESTLAHGETFADAANAIWDMLAERNAQDKCLAVGVNCVHPKFVTSLFKSLNGDRS 256
Query: 291 -TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
+ IPLVVYPNSGE + +++ W ++ +PL Y
Sbjct: 257 VEDQIPLVVYPNSGE----------------VYDVVKGWEGRE---------HCVPLANY 291
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
V +W G ++GGCCRTYA D H+ + +W
Sbjct: 292 --------------------------VPEWSQLGAKIIGGCCRTYARDIRHIGEAIRNW 324
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 48/211 (22%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G LAIETIP EA+ L +L ++P+ K W++F CK E+ GE + DA
Sbjct: 161 AGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCKDESTLA-----HGETFADAA 215
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDI 419
NA W D L E A C + +H K
Sbjct: 216 NAIW--------------DMLAERNA--QDKCLAVGVNCVHPK----------------- 242
Query: 420 IDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTD 479
+S F + D V+ + + + Y+ W R+ C P+ YV +
Sbjct: 243 -----FVTSLFKSLNGDRSVEDQIPLVVYPNSGEV---YDVVKGWEGREHCVPLANYVPE 294
Query: 480 WLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
W G ++GGCCRTYA D H+ + +W+
Sbjct: 295 WSQLGAKIIGGCCRTYARDIRHIGEAIRNWN 325
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F A ++M D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ESTLAHGETFADAANAIWDMLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLK-----TENIPLVVYPNSGERYD 573
VGVNCV P V+ L + L + IPLVVYPNSGE YD
Sbjct: 234 VGVNCVHPKFVTSLFKSLNGDRSVEDQIPLVVYPNSGEVYD 274
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VG+ +DG PLWS+ F AT A++ TH DF++
Sbjct: 17 MTVHVGNSVDGDPLWSARFNATNPAAIINTHLDFLQ 52
>gi|195114994|ref|XP_002002052.1| GI17171 [Drosophila mojavensis]
gi|193912627|gb|EDW11494.1| GI17171 [Drosophila mojavensis]
Length = 331
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 200/418 (47%), Gaps = 108/418 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VG+ +DG PLWS+ F AT AV+ TH DF++ GAD+V+TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQNGADLVLTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ S+ G+ME+L+LD S +LIK++V A
Sbjct: 63 YQTSVEGYMEYLELDEQESVELIKNTVRLAHIA--------------------------- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
+ Y+ EA + E H LI S+GP+GA L DGSEY G
Sbjct: 96 -----------KEKYLTECYEAQL-EIHEGYP-------LIIASIGPFGAHLHDGSEYTG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y ++V T+ +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K W++
Sbjct: 137 SYADYVPAKTITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNP-----DQLIAVGVNCVRPLMVSSLIEQLKT--- 291
F CKD+ +++GE F +++ D+ +AVGVNCV P V+ L + L
Sbjct: 197 FQCKDESTLAHGEDFADAVNAIWDLLAERKALDKCLAVGVNCVHPKFVTPLFKSLNGERS 256
Query: 292 --ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
E IPLVVYPNSGE
Sbjct: 257 PDEQIPLVVYPNSGE--------------------------------------------- 271
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
YD V W R+ C P++ YV +W G ++GGCCRTYA D + + D
Sbjct: 272 -----VYD-VTTGWQGREHCVPLENYVPEWTQLGAKIIGGCCRTYARDIRRISEAVHD 323
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 48/209 (22%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G LAIETIP EA+ L +L ++P+ K W++F CK E+ GE + DAV
Sbjct: 161 AGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVAFQCKDESTL-----AHGEDFADAV 215
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDI 419
NA W D L E AL C + +H K +V+
Sbjct: 216 NAIW--------------DLLAERKAL--DKCLAVGVNCVHPK-----FVT--------- 245
Query: 420 IDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTD 479
PL+ S + D + + + + Y+ W R+ C P++ YV +
Sbjct: 246 ----PLFKSLNGERSPDEQIP----LVVYPNSGEV---YDVTTGWQGREHCVPLENYVPE 294
Query: 480 WLDEGVALVGGCCRTYAEDTLHMKHRLDD 508
W G ++GGCCRTYA D + + D
Sbjct: 295 WTQLGAKIIGGCCRTYARDIRRISEAVHD 323
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-----DQLIA 537
E ALV C Y + + + D + +++GE F +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ESTLAHGEDFADAVNAIWDLLAERKALDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKTE-----NIPLVVYPNSGERYD 573
VGVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 VGVNCVHPKFVTPLFKSLNGERSPDEQIPLVVYPNSGEVYD 274
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VG+ +DG PLWS+ F AT AV+ TH DF++
Sbjct: 17 MTVHVGNSVDGDPLWSARFNATNPTAVINTHLDFLQ 52
>gi|289743225|gb|ADD20360.1| homocysteine S-methyltransferase [Glossina morsitans morsitans]
Length = 333
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 202/410 (49%), Gaps = 107/410 (26%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFS+QL+ +VGD IDG PLW S F +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 15 GGFSTQLAKHVGDKIDGDPLWGSRFDKENPEAVIQTHLDFLEVGADIIVTNTYQSSVEGF 74
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+ L+L + S L++ SV +A++A + I L+D
Sbjct: 75 TKHLNLTKEESIDLMRESVK-----LAMQAKNKYIER-------------------LKDC 110
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
+ ++ +P LI GS+GPYGA L DGSEY G Y E +++
Sbjct: 111 NRHK---------------------EPGLP-LIMGSIGPYGAMLHDGSEYNGSYTEQLTK 148
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR-LLREWPHQKAWLSFSCKDDKH 247
+ +WHR RI+A++ G D LA+ETIP EA+ + LL+++P K W+SF CKD+ H
Sbjct: 149 QDIQQWHRTRIEAVLSGGVDGLAVETIPCQMEAEAVTEMLLKDYPDVKFWVSFQCKDELH 208
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT----ENIP-LV 297
+++GE+F A++ + + D+L +GVNCV P VS+L + L E IP L+
Sbjct: 209 LAHGENFANAAKSVWELVRKANAVDRLYGIGVNCVNPKFVSTLFQSLHKLLNHEQIPQLI 268
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VY N GE YD
Sbjct: 269 VYSNRGE--------------------------------------------------IYD 278
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
A W D C P+ YV +W+ ++GGCCR Y ED L ++ +D+
Sbjct: 279 ATKGEWTGHDKCVPLASYVPEWVQLQAKIIGGCCRVYPEDILAIRKCIDN 328
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLKT----ENI 560
D+ H+++GE+F A++ + + D+L +GVNCV P VS L + L E I
Sbjct: 205 DELHLAHGENFANAAKSVWELVRKANAVDRLYGIGVNCVNPKFVSTLFQSLHKLLNHEQI 264
Query: 561 P-LVVYPNSGERYD 573
P L+VY N GE YD
Sbjct: 265 PQLIVYSNRGEIYD 278
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 508
W D C P+ YV +W+ ++GGCCR Y ED L ++ +D+
Sbjct: 284 WTGHDKCVPLASYVPEWVQLQAKIIGGCCRVYPEDILAIRKCIDN 328
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 399 LHMKHRLDDWVSGLST----YVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
LH+K + G ST +VGD IDG PLW S F +AV+QTH DF++
Sbjct: 4 LHLKGLVLVKSGGFSTQLAKHVGDKIDGDPLWGSRFDKENPEAVIQTHLDFLE 56
>gi|194879917|ref|XP_001974328.1| GG21671 [Drosophila erecta]
gi|190657515|gb|EDV54728.1| GG21671 [Drosophila erecta]
Length = 331
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 202/422 (47%), Gaps = 114/422 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V L DGGF +Q++ +VG+ +DG PLWSS F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLLKDGGFGTQMTVHVGNSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV---DYVKEAIALEATHARIRSDDPARDILIAGS 117
YQ+S+ G+ME+L+LD + S +LIK++V KE E A++ P LI S
Sbjct: 63 YQSSLEGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLTV--PEGYPLIIAS 120
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
+GPYGA L DGSEY G Y ++V + +WHR+
Sbjct: 121 IGPYGAHLHDGSEYTGSYADYVPAKEITDWHRV--------------------------- 153
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKA 236
RI+A +EAG D LAIETIP EA+ L +L ++P K
Sbjct: 154 --------------------RIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKF 193
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK- 290
W++F C + +++GE+F +++ D+ +A+GVNCV P V+ L + L
Sbjct: 194 WVAFQCNGENTLAHGETFADATNAIWDLLAERNAQDKCLAIGVNCVNPKFVTPLFKSLNG 253
Query: 291 ----TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E IPLVVYPNSGE
Sbjct: 254 DREVAEQIPLVVYPNSGE------------------------------------------ 271
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
VY D VN W ++ C P+ YV +W G ++GGCCRTYA D H+ +
Sbjct: 272 -VY-------DVVNG-WQGKEHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIR 322
Query: 407 DW 408
DW
Sbjct: 323 DW 324
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + + + +++GE+F +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCNG--ENTLAHGETFADATNAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLK-----TENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVNPKFVTPLFKSLNGDREVAEQIPLVVYPNSGEVYD 274
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ N W ++ C P+ YV +W G ++GGCCRTYA D H+ + DW+
Sbjct: 273 YDVVNGWQGKEHCVPLANYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIRDWN 325
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VG+ +DG PLWSS F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGNSVDGDPLWSSRFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|307168595|gb|EFN61653.1| Homocysteine S-methyltransferase 1 [Camponotus floridanus]
Length = 324
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 205/418 (49%), Gaps = 106/418 (25%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
VK++DGGFS QLS +VG IDG PLW++ FLAT DAV TH DF++AG DI+ TN+YQ
Sbjct: 4 TVKILDGGFSGQLSRHVGAKIDGDPLWTARFLATDPDAVYATHLDFLRAGVDIIETNTYQ 63
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ G M +L+++ S L+ +V K+A+ + I+ D R
Sbjct: 64 ASVPGLMRYLNVNEHESLNLLAKAVGLAKKAVDIH-----IQETDNLRK----------- 107
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
P +IAGS GPYGA L D SEY G Y
Sbjct: 108 --------------------------------PHTRPMIAGSCGPYGAYLHDSSEYTGFY 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ VS + +WHRPR+QAL++AG D+LA+ETIP +EA+ L LLRE+PH +AWLSFSC
Sbjct: 136 GKSVSRQELIDWHRPRVQALLDAGVDLLALETIPCIEEAEALLELLREFPHARAWLSFSC 195
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-------IP 295
+D + +++G F +VA CY P Q++AVG+NC+ V+ L++ + IP
Sbjct: 196 RDGQLLADGSIFQEVAVRCYRALPSQIVAVGINCIDSRYVTPLLKGINVNGKSSSQDFIP 255
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
L+VYPN G +I+ A + L + EW
Sbjct: 256 LIVYPNRGGSYSSIDGWTAVPDDHSLKLPISEW--------------------------- 288
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
+D GV +GGCC+ +AED ++ +D + + ++
Sbjct: 289 ------------------------VDMGVRYIGGCCKIFAEDIKVIRSEVDQYCAKIT 322
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-------IPL 562
D + +++G F +VA CY P Q++AVG+NC+ V+PL++ + IPL
Sbjct: 197 DGQLLADGSIFQEVAVRCYRALPSQIVAVGINCIDSRYVTPLLKGINVNGKSSSQDFIPL 256
Query: 563 VVYPNSGERY 572
+VYPN G Y
Sbjct: 257 IVYPNRGGSY 266
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 405 LDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
LD SG LS +VG IDG PLW++ FLAT DAV TH DF++
Sbjct: 8 LDGGFSGQLSRHVGAKIDGDPLWTARFLATDPDAVYATHLDFLR 51
>gi|312381266|gb|EFR27053.1| hypothetical protein AND_06463 [Anopheles darlingi]
Length = 279
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 175/315 (55%), Gaps = 60/315 (19%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ V ++DGGF++QLS +VG IDG PLWS+ F AT +AV +TH DF++AGA+ +MTN+
Sbjct: 1 MSAVTVLDGGFATQLSVHVGKSIDGDPLWSARFNATNPNAVFRTHLDFLEAGAEAIMTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQASI G+ E L L+ D+S LIKS+V R AR +A
Sbjct: 61 YQASIEGYGEHLHLNEDASLNLIKSTV----------------RVAQMARTRFLAS---- 100
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R+ T+ P L+ S+GPYGA L DGSEY G
Sbjct: 101 ----------------------------RVSTNQPRTTPLLVASIGPYGAHLHDGSEYTG 132
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y VS T+ +WHRPRI A VEAG D+L IETIP EA L ++ E+P + W+S
Sbjct: 133 SYATTVSPDTIQKWHRPRIDACVEAGVDVLGIETIPCKMEAAALFDMMCEEYPSVRFWIS 192
Query: 240 FSCKDDKHISNGESFTQV-----ARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN- 293
F CKD+ H++NGE F++ AR N L+A+GVNCV P +V+ L + + +
Sbjct: 193 FQCKDNLHLANGELFSETVNSLWARARARRN-KTLLALGVNCVHPQIVTPLFKSVNEQKA 251
Query: 294 ----IPLVVYPNSGE 304
IPL+VYPNSGE
Sbjct: 252 PEVRIPLIVYPNSGE 266
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 409 VSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRD 468
V+ + Y + DG SY + D + + HR I D + L I+
Sbjct: 114 VASIGPYGAHLHDGSEYTGSYATTVSPDTIQKWHRPRI------DACVEAGVDVLGIETI 167
Query: 469 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQV----- 523
C+ E AL C Y + + D + H++NGE F++
Sbjct: 168 PCK----------MEAAALFDMMCEEYPSVRFWISFQCKD--NLHLANGELFSETVNSLW 215
Query: 524 ARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-----IPLVVYPNSGERY 572
AR N L+A+GVNCV P +V+PL + + + IPL+VYPNSGE Y
Sbjct: 216 ARARARRN-KTLLALGVNCVHPQIVTPLFKSVNEQKAPEVRIPLIVYPNSGEIY 268
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ + LS +VG IDG PLWS+ F AT +AV +TH DF++
Sbjct: 11 FATQLSVHVGKSIDGDPLWSARFNATNPNAVFRTHLDFLEA 51
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAV 359
+G +L IETIP EA L ++ E+P+ + W+SF CK +N+ L +GE + + V
Sbjct: 157 AGVDVLGIETIPCKMEAAALFDMMCEEYPSVRFWISFQCK-DNLHLA----NGELFSETV 211
Query: 360 NARW 363
N+ W
Sbjct: 212 NSLW 215
>gi|170035699|ref|XP_001845705.1| numb-associated kinase [Culex quinquefasciatus]
gi|167878011|gb|EDS41394.1| numb-associated kinase [Culex quinquefasciatus]
Length = 996
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 212/424 (50%), Gaps = 120/424 (28%)
Query: 6 LIDGGFSSQLSTYVGDI-IDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
+IDGGFS+QL+T+VG +D PLWSS + AT +AV++TH DF+KAGAD ++TN+YQAS
Sbjct: 678 VIDGGFSTQLATHVGQTTLDKDPLWSSRYNATNPNAVIETHLDFLKAGADCILTNTYQAS 737
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
I G+M+FL+L + S +LIK++V+ K AR R
Sbjct: 738 IEGYMDFLNLSEEDSIKLIKTAVELAK--------LARTR-------------------- 769
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
Y + +E+ + H++ + GS+GPYGA L DGSEY G Y +
Sbjct: 770 ------YLAEKIEN-------KTHKIP--------WVVGSIGPYGAHLHDGSEYTGAYAD 808
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCK 243
V A + +WHR RI A++EAG D LAIETIP KEA+ L LL E P + W+SF CK
Sbjct: 809 TVPYARIQKWHRQRINAVLEAGVDALAIETIPCRKEAEALLELLTTEHPTVRFWVSFQCK 868
Query: 244 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKTEN----- 293
D + + GE+F + A ++ NP+ L+A+GVNC+ P+ ++ LKT N
Sbjct: 869 DGVNTARGENFAETAAAIWSQARALKNPN-LLAIGVNCLHPVHA---VQLLKTANERRPD 924
Query: 294 ---IPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
IPL+VYPNSGE W N W + + +PL Y
Sbjct: 925 DDKIPLIVYPNSGEI----------------------WDN-GVW---KGEEDCVPLETY- 957
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
V +++ GV VGGCCRT A+D +K + +
Sbjct: 958 -------------------------VPQFVEYGVKFVGGCCRTTAQDIKRIKKTVINLCG 992
Query: 411 GLST 414
G ST
Sbjct: 993 GRST 996
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLKTEN----- 559
D + + GE+F + A ++ NP+ L+A+GVNC+ P+ ++ LKT N
Sbjct: 869 DGVNTARGENFAETAAAIWSQARALKNPN-LLAIGVNCLHPVHA---VQLLKTANERRPD 924
Query: 560 ---IPLVVYPNSGERYDFHLADEKNNCV 584
IPL+VYPNSGE +D + + +CV
Sbjct: 925 DDKIPLIVYPNSGEIWDNGVWKGEEDCV 952
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 463 LWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 503
+W + C P++ YV +++ GV VGGCCRT A+D +K
Sbjct: 944 VWKGEEDCVPLETYVPQFVEYGVKFVGGCCRTTAQDIKRIK 984
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 408 WVSGLSTYVGDI-IDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
+ + L+T+VG +D PLWSS + AT +AV++TH DF+K
Sbjct: 683 FSTQLATHVGQTTLDKDPLWSSRYNATNPNAVIETHLDFLKA 724
>gi|194879912|ref|XP_001974327.1| GG21670 [Drosophila erecta]
gi|190657514|gb|EDV54727.1| GG21670 [Drosophila erecta]
Length = 331
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 199/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLARNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
M++L + + +LI+ SV ++ A E + I G
Sbjct: 79 MKYLGVTRERGVELIQKSVQLARQ--AKEQYLSEI------------------------G 112
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
SE E+ + LI GS+GPYGA L DGSEY G+YVE++S+
Sbjct: 113 SEL---------ESALP--------------LILGSIGPYGAYLHDGSEYSGNYVENISK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WHR RI+ + AG D LA+ET+P EA+ + L L +P K W+S C+D+KH
Sbjct: 150 EQLKAWHRTRIEICLAAGVDGLALETLPCQLEAEAVTELVLDNFPDAKFWVSMQCRDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 LASGETFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE YD
Sbjct: 270 YSNRGEI--------------------------------------------------YDT 279
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
W E V K+V +WL GV +VGGCCR Y D L ++ +D
Sbjct: 280 EQGEWTGTG--EEVVKFVPEWLQLGVRIVGGCCRVYPTDVLAIRTYVD 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 9/73 (12%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHLASGETFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYD 573
PLVVY N GE YD
Sbjct: 266 PLVVYSNRGEIYD 278
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C+ E + SGE + +A + W
Sbjct: 171 LALETLPCQLEAEAVTELVLDNFPDAKFWVSMQCRDEK-----HLASGETFAEAALSVW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I ++ + W E V K+V +WL
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDTEQGE----------WTGTG--EEVVKFVPEWL 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRTYVDGLNIK 330
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKRILVKCGGFSSQLARNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNSPNLWIDRDLCEPVDKYVTDWLDEGVALV 488
Y S E KY+ + GV L+
Sbjct: 70 TYQSS--------VEGFMKYLGVTRERGVELI 93
>gi|289741865|gb|ADD19680.1| homocysteine S-methyltransferase [Glossina morsitans morsitans]
Length = 331
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 205/422 (48%), Gaps = 114/422 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ ++ + DGGF +Q++ +VGD +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTSILVKDGGFGTQMTVHVGDAVDGDPLWSARFNATKPAAIINTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV---DYVKEAIALEATHARIRSDDPARDILIAGS 117
YQ S+ G+ME+++L+ + S +LIK++V KE E A + + +I S
Sbjct: 63 YQTSVEGYMEYMELNEEQSVELIKNTVRLAHIAKEKYLSECCQAGLNITEGFP--MIIAS 120
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
+GPYGA L DGSEY G Y +++S + +WHR+
Sbjct: 121 IGPYGAHLHDGSEYTGSYADYLSAKDITDWHRV--------------------------- 153
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKA 236
RI A ++AG D LAIETIP EA+ L +L E + K
Sbjct: 154 --------------------RIDACLDAGIDALAIETIPCQMEAEALVDMLCEDYADVKF 193
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQ-----LIAVGVNCVRPLMVSSLIEQLKT 291
W+SF CKD+K +++GE F + A + +++ ++ +A+G NCV P V+ L++ +
Sbjct: 194 WISFQCKDEKTLAHGEVFAEAALSVWDLLRNRNAQKNCLAIGANCVHPKFVTPLLQSVNA 253
Query: 292 -----ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E IPLVVYPNSGE
Sbjct: 254 HKKPEEKIPLVVYPNSGE------------------------------------------ 271
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
YD V+ W+ ++ C P+ YV +W G ++GGCCRTYA D +K +
Sbjct: 272 --------IYD-VDKGWLGKEHCVPLADYVPEWAHLGAKIIGGCCRTYARDIRLIKEAVQ 322
Query: 407 DW 408
D+
Sbjct: 323 DY 324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQ-----LIA 537
E ALV C YA+ + + D +K +++GE F + A + +++ ++ +A
Sbjct: 176 EAEALVDMLCEDYADVKFWISFQCKD--EKTLAHGEVFAEAALSVWDLLRNRNAQKNCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+G NCV P V+PL++ + E IPLVVYPNSGE YD
Sbjct: 234 IGANCVHPKFVTPLLQSVNAHKKPEEKIPLVVYPNSGEIYD 274
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWD 510
Y+ W+ ++ C P+ YV +W G ++GGCCRTYA D +K + D++
Sbjct: 273 YDVDKGWLGKEHCVPLADYVPEWAHLGAKIIGGCCRTYARDIRLIKEAVQDYN 325
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
++ +VGD +DG PLWS+ F AT A++ TH DF++
Sbjct: 17 MTVHVGDAVDGDPLWSARFNATKPAAIINTHLDFLQ 52
>gi|328711356|ref|XP_001945392.2| PREDICTED: homocysteine S-methyltransferase-like isoform 1
[Acyrthosiphon pisum]
Length = 336
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 198/407 (48%), Gaps = 108/407 (26%)
Query: 6 LIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
L+DG F S + YV D + HPLW S + ++AVV+ HRD+I+AGA+ + TN+YQAS
Sbjct: 36 LLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTYQAS 95
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
I GF ++L+L+YD S +K+++ +
Sbjct: 96 IEGFQKYLNLNYDQ-------SFQLIKKSVTI---------------------------- 120
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
A M E R I I GSVGPYGASL DGSEY G+Y+
Sbjct: 121 --------------CRRAIMEE-------SSGRTIRIMGSVGPYGASLCDGSEYNGNYIG 159
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+ + +WH+PRIQALVEAG D++ ETIP+ EA +L +L E+P+QKA LSFSCKD
Sbjct: 160 KIDSKDLYDWHKPRIQALVEAGVDVVLFETIPSIIEANILLNILAEYPNQKACLSFSCKD 219
Query: 245 DKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+H+S+GE+F + V + N + QLIA+G+NC+ P +++ L+ +KTEN+ + YPN G
Sbjct: 220 SEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTENVNFITYPNGG 279
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
W DAV W
Sbjct: 280 ----------------------------GVW----------------------DAVKKCW 289
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ + + + W ++G+ ++GGCC T + +++ +D+ S
Sbjct: 290 DNTQMYQVSIDDLNLWSEKGLKIIGGCCNTGVTEISRIRNLIDNLSS 336
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 510 DDKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
D +H+S+GE+F + V + N + QLIA+G+NC+ P +++PL+ +KTEN+ + YPN
Sbjct: 219 DSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTENVNFITYPNG 278
Query: 569 GERYD 573
G +D
Sbjct: 279 GGVWD 283
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 382 EGVALVGGCCRTYAEDT--LHMKHRLDD--WVSGLSTYVG-DIIDGHPLWSSYFLATAKD 436
E + ++ C +D+ L+MK L D ++SG+ YV D + HPLW S + ++
Sbjct: 11 ENIFVLTFSCFVDMQDSTVLNMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEE 70
Query: 437 AVVQTHRDFIKG 448
AVV+ HRD+I+
Sbjct: 71 AVVKAHRDYIRA 82
>gi|328711354|ref|XP_003244518.1| PREDICTED: homocysteine S-methyltransferase-like isoform 2
[Acyrthosiphon pisum]
gi|328711358|ref|XP_003244519.1| PREDICTED: homocysteine S-methyltransferase-like isoform 3
[Acyrthosiphon pisum]
Length = 313
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 198/407 (48%), Gaps = 108/407 (26%)
Query: 6 LIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
L+DG F S + YV D + HPLW S + ++AVV+ HRD+I+AGA+ + TN+YQAS
Sbjct: 13 LLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTYQAS 72
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
I GF ++L+L+YD S +K+++ +
Sbjct: 73 IEGFQKYLNLNYDQ-------SFQLIKKSVTI---------------------------- 97
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
A M E R I I GSVGPYGASL DGSEY G+Y+
Sbjct: 98 --------------CRRAIMEE-------SSGRTIRIMGSVGPYGASLCDGSEYNGNYIG 136
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+ + +WH+PRIQALVEAG D++ ETIP+ EA +L +L E+P+QKA LSFSCKD
Sbjct: 137 KIDSKDLYDWHKPRIQALVEAGVDVVLFETIPSIIEANILLNILAEYPNQKACLSFSCKD 196
Query: 245 DKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+H+S+GE+F + V + N + QLIA+G+NC+ P +++ L+ +KTEN+ + YPN G
Sbjct: 197 SEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTENVNFITYPNGG 256
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
W DAV W
Sbjct: 257 ----------------------------GVW----------------------DAVKKCW 266
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ + + + W ++G+ ++GGCC T + +++ +D+ S
Sbjct: 267 DNTQMYQVSIDDLNLWSEKGLKIIGGCCNTGVTEISRIRNLIDNLSS 313
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 510 DDKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
D +H+S+GE+F + V + N + QLIA+G+NC+ P +++PL+ +KTEN+ + YPN
Sbjct: 196 DSEHLSHGETFASAVEKFWTNDSRKQLIAIGMNCMDPQLITPLLTSVKTENVNFITYPNG 255
Query: 569 GERYD 573
G +D
Sbjct: 256 GGVWD 260
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 399 LHMKHRLDD--WVSGLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
L+MK L D ++SG+ YV D + HPLW S + ++AVV+ HRD+I+
Sbjct: 7 LNMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRA 59
>gi|21711775|gb|AAM75078.1| RE64786p [Drosophila melanogaster]
Length = 326
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 200/409 (48%), Gaps = 111/409 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DGGF +Q++ +VGD +DG PLWS+ F AT A++ TH DF++ GADI++TN+
Sbjct: 3 LTRVLVKDGGFGTQMTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNT 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV---DYVKEAIALEATHARIRSDDPARDILIAGS 117
YQ+S+ G+ME+L+LD + S +LIK++V KE E A++
Sbjct: 63 YQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQL-------------- 108
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
S+++G LI S+GP+GA L DGSE
Sbjct: 109 ------SVQEGYP-----------------------------LIIASIGPFGAHLHDGSE 133
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKA 236
Y G Y + V + +WHR RI+A +EAG D LAIETIP EA+ L +L ++P K
Sbjct: 134 YTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKF 193
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT 291
W++F CKD+ +++GE+F A +++ D+ +A+GVNCV P V+ L + L
Sbjct: 194 WVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKSLNG 253
Query: 292 ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN 351
+ RE E IPLVVYPN
Sbjct: 254 D---------------------------------RE------------VGEQIPLVVYPN 268
Query: 352 SGERYDAVNARWIDRDLCEPVDKYVTDW-------LDEGVALVGGCCRT 393
SGE YD VN W R+ C P+ YV +W L + VAL+ G T
Sbjct: 269 SGEVYDVVNG-WQGREHCVPLANYVPEWGNWGPRSLGDAVALMRGIYAT 316
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNM-----NPDQLIA 537
E ALV C Y + + + D + +++GE+F A +++ D+ +A
Sbjct: 176 EAEALVEMLCDDYPDVKFWVAFQCKD--ENTLAHGETFADAANAIWDLLAERNAQDKCLA 233
Query: 538 VGVNCVRPLMVSPLIEQLKT-----ENIPLVVYPNSGERYD 573
+GVNCV P V+PL + L E IPLVVYPNSGE YD
Sbjct: 234 IGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYD 274
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 412 LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
++ +VGD +DG PLWS+ F AT A++ TH DF++ Y S
Sbjct: 17 MTVHVGDSVDGDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQS 65
>gi|195484290|ref|XP_002090631.1| GE12691 [Drosophila yakuba]
gi|194176732|gb|EDW90343.1| GE12691 [Drosophila yakuba]
Length = 331
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 191/408 (46%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AVVQTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLARNVNEKVDGDPLWGSRFDATNPEAVVQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV ++ A E I SD + LI GS+GPYGA L DG
Sbjct: 79 VKYLGVTRERGVELIQKSVQLARQ--AKEQYLTEIGSDLESALPLILGSIGPYGACLHDG 136
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
SEY G+Y +S+ + WH
Sbjct: 137 SEYSGNYAHKISKEQLKSWH---------------------------------------- 156
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
R RI+ L+ AG D LA+ET+P E + + L L + K W+S CKD+KH
Sbjct: 157 -------RTRIEILLAAGVDGLALETLPCQLEVEAVAELVLDNFSDAKFWVSLQCKDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 LASGEPFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE +Y DA
Sbjct: 270 YSNRGE-------------------------------------------IY-------DA 279
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
W E V K+V +W+ G +VGGCCR Y D L ++ +D
Sbjct: 280 EQGEWTGTG--EEVVKFVPEWIQLGARIVGGCCRVYPTDVLAIRKYVD 325
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHLASGEPFAEAALSVWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYD 573
PLVVY N GE YD
Sbjct: 266 PLVVYSNRGEIYD 278
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AVVQTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLARNVNEKVDGDPLWGSRFDATNPEAVVQTHLDFLRNGADIILTN 69
Query: 457 DYNSPNLWIDRDLCEPVDKYVTDWLDEGVALV 488
Y S E KY+ + GV L+
Sbjct: 70 TYQSS--------VEGFVKYLGVTRERGVELI 93
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 471 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
E V K+V +W+ G +VGGCCR Y D L ++ +D + K
Sbjct: 289 EEVVKFVPEWIQLGARIVGGCCRVYPTDVLAIRKYVDGLNIK 330
>gi|195437795|ref|XP_002066825.1| GK24683 [Drosophila willistoni]
gi|194162910|gb|EDW77811.1| GK24683 [Drosophila willistoni]
Length = 350
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 188/412 (45%), Gaps = 113/412 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGF+SQLS +G +DGHPLWSS F A+ +AV+QTH DF+ +GADI++TN+YQ+S+ GF
Sbjct: 34 GGFASQLSRNLGQKVDGHPLWSSRFDASNPEAVIQTHLDFLHSGADIILTNTYQSSVEGF 93
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA----RDILIAGSVGPYGAS 124
M+ L + + S +LI SV +A D P RD ++ S+GPYGA
Sbjct: 94 MKHLQVTREQSIELIAQSVKLALQAKDTYLKDLEEAEDTPCKNSRRDPIVLASIGPYGAH 153
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
L DGSEY GDY + V + +WH++
Sbjct: 154 LHDGSEYTGDYSDQVQTELLQKWHKV---------------------------------- 179
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCK 243
RI + G D LA+ET+P EA+ + L L + + K W+SF C+
Sbjct: 180 -------------RIDTCLLNGVDGLAVETMPCLLEAKAVTELILTSYSNVKFWVSFQCR 226
Query: 244 DDKHISNGESFTQVARTCYNMNPD-----QLIAVGVNCVRPLMVSSLIEQLKT----ENI 294
D+ ++NGESF A T + M D +L+A+GVNCV P VSSL + L + + I
Sbjct: 227 DETSLANGESFAHAAHTIWRMVQDAGQESRLLAIGVNCVNPNFVSSLFKSLNSLAGPDRI 286
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGE 354
PL+VY N GE
Sbjct: 287 PLIVYSNRGE-------------------------------------------------- 296
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
YD+ + WI + V ++V +W+ G +VGGCCR Y D ++ D
Sbjct: 297 IYDSASGEWIGSG--QNVVEFVPEWIKLGARIVGGCCRVYPADIARIRQCAD 346
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 510 DDKHISNGESFTQVARTCYNMNPD-----QLIAVGVNCVRPLMVSPLIEQLKT----ENI 560
D+ ++NGESF A T + M D +L+A+GVNCV P VS L + L + + I
Sbjct: 227 DETSLANGESFAHAAHTIWRMVQDAGQESRLLAIGVNCVNPNFVSSLFKSLNSLAGPDRI 286
Query: 561 PLVVYPNSGERYD 573
PL+VY N GE YD
Sbjct: 287 PLIVYSNRGEIYD 299
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFI 446
+ S LS +G +DGHPLWSS F A+ +AV+QTH DF+
Sbjct: 36 FASQLSRNLGQKVDGHPLWSSRFDASNPEAVIQTHLDFL 74
>gi|260796187|ref|XP_002593086.1| hypothetical protein BRAFLDRAFT_114091 [Branchiostoma floridae]
gi|229278310|gb|EEN49097.1| hypothetical protein BRAFLDRAFT_114091 [Branchiostoma floridae]
Length = 315
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 55/344 (15%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
K++DGG +++L + G I+ PLWS+ LAT A+ Q H+ F+ AG+D+++T +YQ
Sbjct: 2 ETKVLDGGLATELD-FAGFDINNDPLWSARLLATNPAAIKQVHKSFLSAGSDVIITATYQ 60
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ GF E+L + + +++L+ V K+A LE + + D P R
Sbjct: 61 ASVPGFQEYLGVSVEEAHKLMDHGVRIAKQAC-LEFCKEQDKGDFPGR------------ 107
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R+ L AGSVGPYGA L D SEY G+Y
Sbjct: 108 ----------------------------------RNPLAAGSVGPYGACLHDASEYTGEY 133
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V+ +S + WHRPR+ L+ +GAD++AIETIPA KEA L +LLRE+P+ +AW++FSC
Sbjct: 134 VDSMSIEELQRWHRPRLGQLITSGADMVAIETIPAVKEAAALVQLLREFPNTRAWVTFSC 193
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ----LKTENIPLVV 298
KD H +GESF + + Q+ A G NC P V+ L+++ K +
Sbjct: 194 KDGLHTCHGESFPEAIAAV--LKSPQVFAAGANCCMPEHVAPLLQKARELCKDPAKFFIA 251
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCKT 341
YPNSGE A + + L + EW + A W+ C+T
Sbjct: 252 YPNSGEKWAAGTGWHGKADCRPLSTFVPEWLDHGARWIGGCCRT 295
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 51/173 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK---- 340
IE+L+ + P L SG ++AIETIPA KEA L +LLRE+PN +AW++FSCK
Sbjct: 139 IEELQRWHRPRLGQLITSGADMVAIETIPAVKEAAALVQLLREFPNTRAWVTFSCKDGLH 198
Query: 341 ---TENIP------------------------------------------LVVYPNSGER 355
E+ P + YPNSGE+
Sbjct: 199 TCHGESFPEAIAAVLKSPQVFAAGANCCMPEHVAPLLQKARELCKDPAKFFIAYPNSGEK 258
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+ A W + C P+ +V +WLD G +GGCCRT +D ++ ++ W
Sbjct: 259 W-AAGTGWHGKADCRPLSTFVPEWLDHGARWIGGCCRTRPDDIKDIRSSIEQW 310
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
W + C P+ +V +WLD G +GGCCRT +D ++ ++ W
Sbjct: 265 WHGKADCRPLSTFVPEWLDHGARWIGGCCRTRPDDIKDIRSSIEQW 310
>gi|195148673|ref|XP_002015292.1| GL19625 [Drosophila persimilis]
gi|198475016|ref|XP_001356892.2| GA10445 [Drosophila pseudoobscura pseudoobscura]
gi|194107245|gb|EDW29288.1| GL19625 [Drosophila persimilis]
gi|198138642|gb|EAL33958.2| GA10445 [Drosophila pseudoobscura pseudoobscura]
Length = 349
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 191/417 (45%), Gaps = 112/417 (26%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT AV++TH DF+++GADI++TN+YQ+S+ GF
Sbjct: 24 GGFSSQLAHNVDEKVDGDPLWGSRFDATNPQAVIKTHLDFLRSGADIILTNTYQSSVEGF 83
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI--LIAGSVGPYGASLR 126
M++L L + S LI+ SV ++A A + ++S + + LI S+GPYGA L
Sbjct: 84 MKYLALTREQSVALIEKSVHLTQQAKA-QYLKEILQSGEIIKPFFPLILASIGPYGAHLH 142
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
DGSEY G Y + +S+ + +WH
Sbjct: 143 DGSEYSGSYADKISKEKLQDWH-------------------------------------- 164
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR-LLREWPHQKAWLSFSCKDD 245
R RI+ + AG D LA ET+P EA + +L + + K W+SF CKDD
Sbjct: 165 ---------RTRIETCLLAGVDGLAAETLPCQLEALAITESILENYTNVKFWVSFQCKDD 215
Query: 246 KHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT----ENIPL 296
+++GESF + A + M +L+ +GVNCV P V+ L+ L + IPL
Sbjct: 216 TSLADGESFAEAALAVWRMVQAYKAQTRLLGIGVNCVNPTFVTPLLRSLNAAAGLDRIPL 275
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVY N GE Y
Sbjct: 276 VVYSNRGEI--------------------------------------------------Y 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
D+V W E V K+V +W+ G +VGGCCR Y +D L ++ +D G S
Sbjct: 286 DSVRGEWTGTG--EDVAKFVPEWVRLGARVVGGCCRVYPDDVLKIRKCVDSLNIGYS 340
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLKT----ENI 560
DD +++GESF + A + M +L+ +GVNCV P V+PL+ L + I
Sbjct: 214 DDTSLADGESFAEAALAVWRMVQAYKAQTRLLGIGVNCVNPTFVTPLLRSLNAAAGLDRI 273
Query: 561 PLVVYPNSGERYD 573
PLVVY N GE YD
Sbjct: 274 PLVVYSNRGEIYD 286
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 471 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
E V K+V +W+ G +VGGCCR Y +D L ++ +D
Sbjct: 297 EDVAKFVPEWVRLGARVVGGCCRVYPDDVLKIRKCVD 333
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDL 469
S L+ V + +DG PLW S F AT AV++TH DF++ Y S
Sbjct: 28 SQLAHNVDEKVDGDPLWGSRFDATNPQAVIKTHLDFLRSGADIILTNTYQSS-------- 79
Query: 470 CEPVDKYVTDWLDEGVALV 488
E KY+ ++ VAL+
Sbjct: 80 VEGFMKYLALTREQSVALI 98
>gi|223967967|emb|CAR93714.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 196/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +GVNCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYTTDVLAIRKYVD 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +GVNCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGVNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYTTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNSPNLWIDRDLCEPVDKYVTDWLDEGVALV 488
Y S E KY+ + GV L+
Sbjct: 70 TYQSS--------VEGFVKYLGVTRERGVELI 93
>gi|47218900|emb|CAG05666.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 189/404 (46%), Gaps = 84/404 (20%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L G + G PLWS+ L T A+ H F+ +GAD++ T +YQAS+
Sbjct: 18 ILDGGLATDLEAQ-GVHLQGDPLWSARLLYTNPQAIRDAHCRFLLSGADVISTATYQASV 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIA-GSVGPYGAS 124
GFM+ L++ + + +LI S V KEA+ + + +P + G V G+
Sbjct: 77 EGFMDHLNVSSEGAKELIMSGVQLAKEAV-----ESFVPGTNPNTTVQSGEGKVNSEGSE 131
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
G G R L+AGS+GPYGA L +GSEY GDY E
Sbjct: 132 GLAGQCSSGR----------------------RCPLVAGSLGPYGAFLHNGSEYTGDYAE 169
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+S + WHRP+++ L A AD+LA ETIP+ KEA+ L LL+E+P+ KAWLS SCKD
Sbjct: 170 KMSVQELKAWHRPQVECLAAAEADVLAFETIPSIKEAEALVELLKEFPNTKAWLSLSCKD 229
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT---ENIPLVVYPN 301
K +S+G F + +QLIAVGVNC P +V L++ +T I VVYPN
Sbjct: 230 VKRLSDGSLFRDAVQIANRS--EQLIAVGVNCCPPELVEPLLDSARTLLSPEISWVVYPN 287
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE W ++ W C +E + SG
Sbjct: 288 SGE----------------------SWDPEQGW----CTSEAALPALLEMSG-------- 313
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W+ +G AL+GGCCR ++ L
Sbjct: 314 ----------------TWVKQGAALIGGCCRISPAHVAKLRRHL 341
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT---ENIPLVVYP 566
D K +S+G F + +QLIAVGVNC P +V PL++ +T I VVYP
Sbjct: 229 DVKRLSDGSLFRDAVQIANRS--EQLIAVGVNCCPPELVEPLLDSARTLLSPEISWVVYP 286
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 287 NSGESWD 293
>gi|223967965|emb|CAR93713.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 195/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +GVNCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +GVNCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGVNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGVNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|116806396|emb|CAL25772.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVSEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|223967963|emb|CAR93712.1| CG10623-PA [Drosophila melanogaster]
gi|223967971|emb|CAR93716.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYNVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE Y+ D
Sbjct: 266 PLVVYSNRGEIYNVEQGD 283
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D W E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYNVEQGD----------WTGTG--EEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|195344948|ref|XP_002039038.1| GM17049 [Drosophila sechellia]
gi|194134168|gb|EDW55684.1| GM17049 [Drosophila sechellia]
Length = 331
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 194/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------ADSALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EQLKAWHTARIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GESF + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGESFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GESF + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGESFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
S L+ V + +DG PLW S F AT +AV+QTH DF++ Y S
Sbjct: 23 SQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQS 73
>gi|116806416|emb|CAL25782.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|116806400|emb|CAL25774.1| CG10623 [Drosophila melanogaster]
gi|116806404|emb|CAL25776.1| CG10623 [Drosophila melanogaster]
gi|116806408|emb|CAL25778.1| CG10623 [Drosophila melanogaster]
gi|223967959|emb|CAR93710.1| CG10623-PA [Drosophila melanogaster]
gi|223967977|emb|CAR93719.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|116806398|emb|CAL25773.1| CG10623 [Drosophila melanogaster]
gi|116806414|emb|CAL25781.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 195/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKLSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|24585077|ref|NP_609921.1| CG10623 [Drosophila melanogaster]
gi|7298507|gb|AAF53726.1| CG10623 [Drosophila melanogaster]
gi|21430108|gb|AAM50732.1| GM29503p [Drosophila melanogaster]
gi|116806402|emb|CAL25775.1| CG10623 [Drosophila melanogaster]
gi|116806406|emb|CAL25777.1| CG10623 [Drosophila melanogaster]
gi|116806410|emb|CAL25779.1| CG10623 [Drosophila melanogaster]
gi|116806412|emb|CAL25780.1| CG10623 [Drosophila melanogaster]
gi|220950070|gb|ACL87578.1| CG10623-PA [synthetic construct]
gi|220959080|gb|ACL92083.1| CG10623-PA [synthetic construct]
gi|223967969|emb|CAR93715.1| CG10623-PA [Drosophila melanogaster]
gi|223967973|emb|CAR93717.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 195/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|310644707|ref|YP_003949466.1| homocysteine s-methyltransferase ybgg [Paenibacillus polymyxa SC2]
gi|309249658|gb|ADO59225.1| Homocysteine S-methyltransferase ybgG [Paenibacillus polymyxa SC2]
gi|392305363|emb|CCI71726.1| homocysteine S-methyltransferase [Paenibacillus polymyxa M1]
Length = 315
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 192/393 (48%), Gaps = 104/393 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ D LWS+ L D++ + HRD+ +AGAD +T SYQA++
Sbjct: 15 VLDGAMATELERHGHDLNDS--LWSAKILYEYPDSIKRVHRDYFEAGADCAITASYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G+++ L + + +LI+SSV IAL+A
Sbjct: 73 EGYVQ-RGLSENEALKLIQSSVQ-----IALQA--------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E+ D AT ++ HR P L+A SVGPYGA L DGSEYRGDY
Sbjct: 100 RD--EFWADVT-----ATASQQHR---PKP----LVAASVGPYGAFLADGSEYRGDY--K 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGADILA ETIP EA+ + RLL+E+P AW+SFS KD+
Sbjct: 144 LSEEQLMEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLKEFPGTYAWISFSAKDE 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HISNGES A+ + +Q+ AVG+NC P + SLI ++ + + P+VVYPN GE
Sbjct: 204 QHISNGESVAACAK--WLNEHEQVAAVGINCTLPKFIPSLIHEIHSHTDKPVVVYPNLGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V W
Sbjct: 262 --------------------------------------------------EYDPVTKTWQ 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E + W G ++GGCCRT +D
Sbjct: 272 GHTCTETFGQSARQWYKAGARMIGGCCRTQPQD 304
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D++HISNGES A+ + +Q+ AVG+NC P + LI ++ + + P+VVYPN
Sbjct: 202 DEQHISNGESVAACAK--WLNEHEQVAAVGINCTLPKFIPSLIHEIHSHTDKPVVVYPNL 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEEYD 264
>gi|116806418|emb|CAL25783.1| CG10623 [Drosophila melanogaster]
Length = 331
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 195/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IHLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 HLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|168823560|ref|NP_001108360.1| homocysteine S-methyltransferase-like isoform 2 [Danio rerio]
gi|159155523|gb|AAI54543.1| Zgc:172121 protein [Danio rerio]
Length = 307
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 185/340 (54%), Gaps = 60/340 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L G + G PLWS+ L T A+ H ++++G+D++ T +YQASI
Sbjct: 7 ILDGGLATELEAS-GFQLQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 65
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+++L + + + ++ S+V KE ++
Sbjct: 66 EGFVKYLGVQPEEAQHMMMSAVQLAKETVS------------------------------ 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E +S++ M++ R+ L+AGSVGPYG+ L DGSEY G Y +
Sbjct: 96 -----------EFISQSPMSD---------RREPLVAGSVGPYGSFLHDGSEYTGAYEDK 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++ + +WHRP+IQ LV+AGAD++A+ETIP KEA+ L ++L+E+P KAWLSFSCKD+
Sbjct: 136 MTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSCKDN 195
Query: 246 KHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE---NIPLVVYPN 301
IS+G F++ V C + QL+AVGVNC L+V L+E K+ ++ VVYPN
Sbjct: 196 NSISSGRRFSEAVEMACRST---QLVAVGVNCCPALLVKPLLESAKSHKRADLSWVVYPN 252
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCK 340
SGE + T ++ L EW Q A W+ C+
Sbjct: 253 SGEG-WDVTTGWKTEMRTSFANLSLEWKAQGALWIGGCCR 291
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 51/167 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN- 343
+E+LK + P + +G ++A+ETIP KEA+ L ++L+E+P KAWLSFSCK N
Sbjct: 138 VEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSCKDNNS 197
Query: 344 -----------------------------------------------IPLVVYPNSGERY 356
+ VVYPNSGE +
Sbjct: 198 ISSGRRFSEAVEMACRSTQLVAVGVNCCPALLVKPLLESAKSHKRADLSWVVYPNSGEGW 257
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
D V W ++ +W +G +GGCCR D +K
Sbjct: 258 D-VTTGW-KTEMRTSFANLSLEWKAQGALWIGGCCRVRPADITELKQ 302
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 510 DDKHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE---NIPLVVY 565
D+ IS+G F++ V C + QL+AVGVNC L+V PL+E K+ ++ VVY
Sbjct: 194 DNNSISSGRRFSEAVEMACRST---QLVAVGVNCCPALLVKPLLESAKSHKRADLSWVVY 250
Query: 566 PNSGERYD 573
PNSGE +D
Sbjct: 251 PNSGEGWD 258
>gi|195580012|ref|XP_002079850.1| GD21796 [Drosophila simulans]
gi|194191859|gb|EDX05435.1| GD21796 [Drosophila simulans]
Length = 331
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 191/408 (46%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
M++L + + +LI+ SV K+ A E + I S+ + LI GS+GPYGA L DG
Sbjct: 79 MKYLGVSRERGVELIQKSVQLAKQ--AKEQYLSEIGSEADSALPLIMGSIGPYGAYLHDG 136
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
SEY G+Y + +S+ + WH
Sbjct: 137 SEYTGNYADKMSKEQLKAWH---------------------------------------- 156
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 157 -------TARIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GESF + A + + + ++L+ +G NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGESFAEAALSLWRLVQSRKAENRLLGIGFNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVIKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAIRKYVD 325
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GESF + A + + + ++L+ +G NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGESFAEAALSLWRLVQSRKAENRLLGIGFNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGESFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGFNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D+ E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDW------------TGTGEEVIKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAIRKYVDGLNIK 330
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
S L+ V + +DG PLW S F AT +AV+QTH DF++ Y S
Sbjct: 23 SQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQS 73
>gi|223967961|emb|CAR93711.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 194/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L +P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYDVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D ++ +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVFAIRKYVD 325
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE YD D
Sbjct: 266 PLVVYSNRGEIYDVEQGD 283
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L +P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D W E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGD----------WTGTG--EEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D ++ +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVFAIRKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|213511026|ref|NP_001133262.1| Homocysteine S-methyltransferase [Salmo salar]
gi|209148170|gb|ACI32923.1| Homocysteine S-methyltransferase [Salmo salar]
Length = 335
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 184/409 (44%), Gaps = 106/409 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + G + G PLWS+ L T + H F+ AGAD++ T +YQAS+
Sbjct: 19 IIDGGLATELES-TGCKLQGDPLWSARLLHTNPQTIKDAHYRFLCAGADVITTATYQASV 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD+ + + QLI S V +E + +D P D
Sbjct: 78 EGFTRHLDVTPEQANQLIMSGVTLARETVK------HFMADQPPSD-------------- 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R L+AGSVGPYGA L +GSEY G Y
Sbjct: 118 ------------------------------RRVPLVAGSVGPYGAFLHNGSEYTGAYAAE 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + WHRP++ LV AG D++A+ETIP+ KEA+ L LLRE+P KAWL+FSCKD
Sbjct: 148 MSVEELKAWHRPQVHCLVTAGVDLIAMETIPSVKEAEALVELLREFPDSKAWLAFSCKDG 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP---LVVYPNS 302
+ IS+ F++ QL+AVGVNC P +V L++ +T+ P VVYPNS
Sbjct: 208 QCISDSSRFSEA--VLLASRSSQLVAVGVNCCPPALVKPLLDSARTQRRPGLGWVVYPNS 265
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE EW W K EN R ++
Sbjct: 266 GE----------------------EWDTYSGWR----KPEN-----------RLSSIA-- 286
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG 411
+ +W+ +G AL+GGCCR ++ ++ +SG
Sbjct: 287 -----------ELSLEWMKQGSALIGGCCRISPAHIAELRRQIHGNMSG 324
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIP---LVVYP 566
D + IS+ F++ QL+AVGVNC P +V PL++ +T+ P VVYP
Sbjct: 206 DGQCISDSSRFSEA--VLLASRSSQLVAVGVNCCPPALVKPLLDSARTQRRPGLGWVVYP 263
Query: 567 NSGERYDFH 575
NSGE +D +
Sbjct: 264 NSGEEWDTY 272
>gi|223967975|emb|CAR93718.1| CG10623-PA [Drosophila melanogaster]
Length = 331
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 195/408 (47%), Gaps = 111/408 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 19 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGF 78
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV K+ A E + I S+ A S P
Sbjct: 79 VKYLGVTRERGVELIQKSVQLAKQ--AKEQYLSEIGSE--------AESALP-------- 120
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
LI GS+GPYGA L DGSEY G+Y + +S+
Sbjct: 121 -------------------------------LIMGSIGPYGAYLHDGSEYTGNYADKMSK 149
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ WH+ RI+ + AG D LA+ET+P EA+ + L L ++P K W+S C D+KH
Sbjct: 150 EELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEKH 209
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLK----TENIPLVV 298
+++GE+F + A + + + ++L+ +G+NCV PL V+ L+ L ++ IPLVV
Sbjct: 210 MASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVV 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
Y N GE I +E + + + + + EW
Sbjct: 270 YSNRGE-IYNVEQGDWTGTGEEVVKFVPEW------------------------------ 298
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ GV +VGGCCR Y D L + +D
Sbjct: 299 ---------------------IQLGVRIVGGCCRVYPTDVLAICKYVD 325
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLK----TENI 560
D+KH+++GE+F + A + + + ++L+ +G+NCV PL V+PL+ L ++ I
Sbjct: 206 DEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRI 265
Query: 561 PLVVYPNSGERYDFHLAD 578
PLVVY N GE Y+ D
Sbjct: 266 PLVVYSNRGEIYNVEQGD 283
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 56/211 (26%)
Query: 307 LAIETIPASKEAQMLCRL-LREWPNQKAWLSFSCKTENIPLVVYPNSGERY-DAVNARWI 364
LA+ET+P EA+ + L L ++P+ K W+S C E + SGE + +A + W
Sbjct: 171 LALETLPCLMEAEAVTELVLDKFPDAKFWVSLQCMDEK-----HMASGENFAEAALSLW- 224
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHP 424
L + ++ + G+ + + P
Sbjct: 225 ---------------------------------RLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 425 LWSSYFLATAKD---AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL 481
L SS D VV ++R I + D W E V K+V +W+
Sbjct: 252 LLSSLTKVAGSDRIPLVVYSNRGEIYNVEQGD----------WTGTG--EEVVKFVPEWI 299
Query: 482 DEGVALVGGCCRTYAEDTLHMKHRLDDWDDK 512
GV +VGGCCR Y D L + +D + K
Sbjct: 300 QLGVRIVGGCCRVYPTDVLAICKYVDGLNIK 330
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 397 DTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLR 456
DT + + + S L+ V + +DG PLW S F AT +AV+QTH DF++
Sbjct: 10 DTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTN 69
Query: 457 DYNS 460
Y S
Sbjct: 70 TYQS 73
>gi|168823508|ref|NP_001108386.1| homocysteine S-methyltransferase-like isoform 1 [Danio rerio]
gi|158253828|gb|AAI53991.1| Zgc:171603 protein [Danio rerio]
Length = 311
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 60/340 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L G ++ G PLWS+ L T A+ H ++++G+D++ T +YQASI
Sbjct: 11 ILDGGLATELEAS-GFLLQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+++L + + + ++ S+V KE ++
Sbjct: 70 EGFVKYLGVQPEEAQHMMMSAVQLAKETVS------------------------------ 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E +S++ M++ R+ L+AGSVGPYG+ L DGSEY G Y +
Sbjct: 100 -----------EFISQSPMSD---------RREPLVAGSVGPYGSFLHDGSEYTGAYEDK 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++ + +WHRP+IQ LV+AGAD++A+ETIP KEA+ L +L+E+P KAWLSFSCKD+
Sbjct: 140 MTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEVLKEFPETKAWLSFSCKDN 199
Query: 246 KHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE---NIPLVVYPN 301
IS+G F++ V C + QL+AVGVNC +V L+E K+ ++ VVYPN
Sbjct: 200 NSISSGRRFSEAVEMACRST---QLVAVGVNCCPAPLVKPLLESAKSHKRADLSWVVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCK 340
SGE + T ++ L EW Q A W+ C+
Sbjct: 257 SGEG-WDVTTGWKTEMRTSFANLSLEWKAQGALWIGGCCR 295
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 68/167 (40%), Gaps = 51/167 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN- 343
+E+LK + P + +G ++A+ETIP KEA+ L +L+E+P KAWLSFSCK N
Sbjct: 142 VEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEVLKEFPETKAWLSFSCKDNNS 201
Query: 344 -----------------------------IPL------------------VVYPNSGERY 356
PL VVYPNSGE +
Sbjct: 202 ISSGRRFSEAVEMACRSTQLVAVGVNCCPAPLVKPLLESAKSHKRADLSWVVYPNSGEGW 261
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
D V W ++ +W +G +GGCCR D +K
Sbjct: 262 D-VTTGW-KTEMRTSFANLSLEWKAQGALWIGGCCRVRPADITELKQ 306
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 510 DDKHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE---NIPLVVY 565
D+ IS+G F++ V C + QL+AVGVNC +V PL+E K+ ++ VVY
Sbjct: 198 DNNSISSGRRFSEAVEMACRST---QLVAVGVNCCPAPLVKPLLESAKSHKRADLSWVVY 254
Query: 566 PNSGERYD 573
PNSGE +D
Sbjct: 255 PNSGEGWD 262
>gi|348513609|ref|XP_003444334.1| PREDICTED: homocysteine S-methyltransferase 1-like [Oreochromis
niloticus]
Length = 333
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 186/403 (46%), Gaps = 111/403 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L + G + G PLWS+ L T A+ H F+ +GAD++ T +YQASI
Sbjct: 36 ILDGGLATDLEAH-GAKLQGDPLWSARLLHTDPQAIRDAHYRFLLSGADVITTATYQASI 94
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L++ S + AR++L++G
Sbjct: 95 PGFISHLEV------------------------------SAERARELLMSGV-------- 116
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
H+++ T+ + + R L+AGSVGPYGA L DGSEY G Y E
Sbjct: 117 ------------HLAKETVKGF-----ESGQRRPLVAGSVGPYGAFLHDGSEYTGAYAEQ 159
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + WHRP+I L AGAD++A ETIP+ KEA+ + LLRE+P+ KAWLSFSCKD
Sbjct: 160 MSVEELKVWHRPQIDCLAAAGADLIAFETIPSIKEAEAVVELLREFPNSKAWLSFSCKDQ 219
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ---LKTENIPLVVYPNS 302
K IS+G F R QL+AVGVNC P +V L++ L T ++ VVYPNS
Sbjct: 220 KCISDGSLFADAVRVASRSR--QLLAVGVNCCPPDVVEPLLDSAGPLHTSDMSWVVYPNS 277
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE EW ++ W +T P P+
Sbjct: 278 GE----------------------EWDTERGW-----QTSGKPSAWTPDLSHM------- 303
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W+ +G AL+GGCCR ++ +L
Sbjct: 304 ----------------WVKQGAALIGGCCRIDPAHIAELRRQL 330
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQ---LKTENIPLVVYP 566
D K IS+G F R QL+AVGVNC P +V PL++ L T ++ VVYP
Sbjct: 218 DQKCISDGSLFADAVRVASRSR--QLLAVGVNCCPPDVVEPLLDSAGPLHTSDMSWVVYP 275
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 276 NSGEEWD 282
>gi|340368364|ref|XP_003382722.1| PREDICTED: homocysteine S-methyltransferase ybgG-like [Amphimedon
queenslandica]
Length = 301
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 186/398 (46%), Gaps = 107/398 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++++ +++ PLWS+ L T + ++ H+ F++ GADI+ T SYQASI
Sbjct: 7 ILDGGLATEIERRGVSLLN-DPLWSARILHTQPELILNVHKSFLQNGADIITTASYQASI 65
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G+ + L L +++ +LI +SV +E ARD
Sbjct: 66 DGYYQHLGLSSENALKLIANSVYLAQE----------------ARD-------------- 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ EH A LIAGSVGPYGA L DGSEY G Y+ H
Sbjct: 96 -----WFSQQPEHKDRA---------------QPLIAGSVGPYGACLCDGSEYTGAYLNH 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S + +WH+PRI+ L+E+G D+LA+ETIP+ EA++L +L ++P KAW+SF+CKD+
Sbjct: 136 TSLEVIKDWHKPRIRQLLESGVDLLALETIPSIIEAKILLEILADYPQAKAWISFTCKDE 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H GE F+ V + + QL+AVG+NC P + L++ + ++P +VYPNSGE
Sbjct: 196 GHTCYGEVFSDVVKAMCSYK--QLVAVGINCSPPQYIGGLLDSVSGCSLPFIVYPNSGEG 253
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
+ W +K C+T
Sbjct: 254 WCS-----------------TGWCGEKVSFISQCRT------------------------ 272
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
W+ +GV ++GGCCR ED +K
Sbjct: 273 -------------WISKGVKIIGGCCRITPEDINLIKQ 297
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D+ H GE F+ V + + QL+AVG+NC P + L++ + ++P +VYPNSG
Sbjct: 194 DEGHTCYGEVFSDVVKAMCSYK--QLVAVGINCSPPQYIGGLLDSVSGCSLPFIVYPNSG 251
Query: 570 ERY 572
E +
Sbjct: 252 EGW 254
>gi|308071460|ref|YP_003873065.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus polymyxa E681]
gi|305860739|gb|ADM72527.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus polymyxa E681]
Length = 315
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 192/393 (48%), Gaps = 104/393 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ D LWS+ L +++ HRD+ +AGAD +T SYQA++
Sbjct: 15 VLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKHVHRDYFEAGADCAITASYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G+++ L+ + + +LI+SSV IA++A
Sbjct: 73 EGYIK-RGLNENEALELIQSSVR-----IAVQA--------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E+ D AT ++ HR L+A SVGPYGA L DGSEYRGDY
Sbjct: 100 RD--EFWADVT-----ATASQRHR-------PKPLVAASVGPYGAFLADGSEYRGDY--K 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGADILA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 144 LSEEQLMEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLKEFPGTYAWISFSAKDG 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HISNGES A N + +Q+ A+G+NC P V SLI ++++ + P+VVYPN GE
Sbjct: 204 QHISNGESAAACAE-WLNWH-EQVAAIGINCTLPKFVPSLIHEIRSHTDKPVVVYPNLGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V W
Sbjct: 262 --------------------------------------------------EYDPVTKTWH 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E + W + G L+GGCCRT +D
Sbjct: 272 GSTCTETFGQSARQWYEAGARLIGGCCRTQPQD 304
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HISNGES A N + +Q+ A+G+NC P V LI ++++ + P+VVYPN
Sbjct: 202 DGQHISNGESAAACAE-WLNWH-EQVAAIGINCTLPKFVPSLIHEIRSHTDKPVVVYPNL 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEEYD 264
>gi|195035503|ref|XP_001989217.1| GH11601 [Drosophila grimshawi]
gi|193905217|gb|EDW04084.1| GH11601 [Drosophila grimshawi]
Length = 349
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 181/409 (44%), Gaps = 108/409 (26%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F T AVV+TH DF++ GADI++TN+YQ+S+ GF
Sbjct: 22 GGFSSQLARNVNEKVDGDPLWGSRFDCTQPTAVVKTHLDFLRNGADIILTNTYQSSVEGF 81
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
M+ L + S LI SV +A +
Sbjct: 82 MKHLGKTREESIALIAKSVQLAHDAKS--------------------------------- 108
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
E+++E A + D P I S+GPYGA L DGSEY+G Y V+
Sbjct: 109 --------EYLAELAAANNGNIDADMP----WILASIGPYGAHLHDGSEYQGSYANRVNY 156
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
+ +WH RI + AG D LA+ET+P EA + L L+ K W+SF CKD+ H
Sbjct: 157 EQLQQWHTTRIDTCLLAGVDGLAVETLPCQLEALAVTELILKRSTTAKFWVSFQCKDELH 216
Query: 248 ISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKT----ENI-PLV 297
+++GESF A + + +L+A+GVNCV P V+ LIE L+ E + PLV
Sbjct: 217 LAHGESFAGAALAVWRLVQQHEAQSRLLAIGVNCVNPSYVTPLIESLRATMAQEQLPPLV 276
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
+Y N GE YD
Sbjct: 277 IYSNRGE--------------------------------------------------VYD 286
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
A W L +V WL G ++GGCCR Y +D L ++ +D
Sbjct: 287 AERGEWTGTGL--NAISFVPQWLQLGARIIGGCCRVYPDDILEIRKYID 333
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLKT----ENI 560
D+ H+++GESF A + + +L+A+GVNCV P V+PLIE L+ E +
Sbjct: 213 DELHLAHGESFAGAALAVWRLVQQHEAQSRLLAIGVNCVNPSYVTPLIESLRATMAQEQL 272
Query: 561 -PLVVYPNSGERYD 573
PLV+Y N GE YD
Sbjct: 273 PPLVIYSNRGEVYD 286
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDL 469
S L+ V + +DG PLW S F T AVV+TH DF++ Y S
Sbjct: 26 SQLARNVNEKVDGDPLWGSRFDCTQPTAVVKTHLDFLRNGADIILTNTYQSS-------- 77
Query: 470 CEPVDKYVTDWLDEGVALVG 489
E K++ +E +AL+
Sbjct: 78 VEGFMKHLGKTREESIALIA 97
>gi|374321182|ref|YP_005074311.1| homocysteine methyltransferase [Paenibacillus terrae HPL-003]
gi|357200191|gb|AET58088.1| homocysteine methyltransferase [Paenibacillus terrae HPL-003]
Length = 326
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 195/395 (49%), Gaps = 104/395 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L + D+ D LWS+ L +++ + HR++ +AGAD +T SYQA
Sbjct: 13 VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPESIKRVHREYFEAGADCAITASYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
++ G+++ L+ + + +LI+SSV IA++A RD + A
Sbjct: 71 TVEGYVQ-RGLNENEALELIQSSVR-----IAVQA-----------RD--------EFWA 105
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
+ G++ + HR L+A SVGPYGA L DGSEYRGDY
Sbjct: 106 DITSGAKQQ---------------HR-------PKPLVAASVGPYGAFLADGSEYRGDYT 143
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+SE + E+HRPR++AL+EAGADILA ETIP EA+ + RLL+E+P AW+SFS K
Sbjct: 144 --LSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLKEFPGTYAWISFSAK 201
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNS 302
D +HISNGES + A + +Q+ AVG+NC P + SLI+++++ + P+VVYPN
Sbjct: 202 DGQHISNGESAAECAE--WLDEHEQVAAVGINCTLPQYIPSLIQEMRSHTDKPVVVYPNL 259
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YD V
Sbjct: 260 GE--------------------------------------------------EYDPVTKT 269
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W E + W + G L+GGCCRT +D
Sbjct: 270 WHGTSCTETFGQSARKWYEAGARLIGGCCRTQPQD 304
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HISNGES + A + +Q+ AVG+NC P + LI+++++ + P+VVYPN
Sbjct: 202 DGQHISNGESAAECAE--WLDEHEQVAAVGINCTLPQYIPSLIQEMRSHTDKPVVVYPNL 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEEYD 264
>gi|390454605|ref|ZP_10240133.1| homocysteine methyltransferase [Paenibacillus peoriae KCTC 3763]
Length = 315
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 192/397 (48%), Gaps = 108/397 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L + D+ D LWS+ L +A+ + HRD+ +AGAD +T SYQA
Sbjct: 13 VIVLDGAMATELERHGHDLNDS--LWSAKILHEHPEAIKRVHRDYFEAGADCAITASYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
++ G+++ + + + +LI+SSV IA++A
Sbjct: 71 TVEGYVQ-RGMSENEALELIQSSVR-----IAVQA------------------------- 99
Query: 124 SLRDGSEYRGDYVEHVSEATMA--EWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
RD E +EA A + HR P L+A SVGPYGA L DGSEYRGD
Sbjct: 100 --RD---------EFWAEAATAANQQHR---PKP----LVAASVGPYGAFLADGSEYRGD 141
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y +SE + E+HRPR++AL+EAGADILA ETIP EA+ + RLL+E+P AW+SFS
Sbjct: 142 Y--KLSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLKEFPGTYAWISFS 199
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYP 300
KD +HISNGES A + +Q+ AVG+NC P + SLI+ +++ + P+VVYP
Sbjct: 200 AKDGQHISNGESVAACAE--WLNEYEQVAAVGINCTLPKFIPSLIQGIRSHTDKPVVVYP 257
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N GE YD V
Sbjct: 258 NLGE--------------------------------------------------EYDPVT 267
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W E + W + G L+GGCCRT +D
Sbjct: 268 KTWHGTTCTETFGQSARHWYEAGARLIGGCCRTQPQD 304
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HISNGES A + +Q+ AVG+NC P + LI+ +++ + P+VVYPN
Sbjct: 202 DGQHISNGESVAACAE--WLNEYEQVAAVGINCTLPKFIPSLIQGIRSHTDKPVVVYPNL 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEEYD 264
>gi|195114992|ref|XP_002002051.1| GI17170 [Drosophila mojavensis]
gi|193912626|gb|EDW11493.1| GI17170 [Drosophila mojavensis]
Length = 349
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 181/411 (44%), Gaps = 111/411 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT DAV+QTH DF++ GADI++TN+YQ+S+ GF
Sbjct: 23 GGFSSQLARNVNEKVDGDPLWGSRFDATQPDAVIQTHLDFLRKGADIILTNTYQSSVEGF 82
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI-LIAGSVGPYGASLRD 127
M+ L + S LI SV+ ++A + + D D+ I S+GPYGA L D
Sbjct: 83 MKHLGKTREESIALIAKSVELARQARTKYLSEVAANNGDIGPDMPWILASIGPYGAHLHD 142
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
GSEY G Y V+ + + WH
Sbjct: 143 GSEYTGSYANLVNFSQLQAWH--------------------------------------- 163
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKDDK 246
+PRI + AG D LA+ET+P EA + LL + + W+SF CKD
Sbjct: 164 --------KPRIDTCLSAGIDGLAVETLPCQLEALAVTDLLLTCYCTPRFWVSFQCKDSS 215
Query: 247 HISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSSLIEQLKTE-----NIPL 296
+++GESF + A +NM +L+ +GVNCV P V+ L++ L + +PL
Sbjct: 216 SLAHGESFAEAALAVWNMVVKHKAQSRLLGIGVNCVNPNYVTPLLKSLLAKLPHGVTVPL 275
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVY N GE Y
Sbjct: 276 VVYSNRGE--------------------------------------------------IY 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
D+ W L V +V +WL G ++GGCCR Y +D ++ ++D
Sbjct: 286 DSDRGEWTGNGL--NVASFVPEWLRLGARIIGGCCRVYPDDIYEIRQTIED 334
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 510 DDKHISNGESFTQVARTCYNM-----NPDQLIAVGVNCVRPLMVSPLIEQLKTE-----N 559
D +++GESF + A +NM +L+ +GVNCV P V+PL++ L +
Sbjct: 213 DSSSLAHGESFAEAALAVWNMVVKHKAQSRLLGIGVNCVNPNYVTPLLKSLLAKLPHGVT 272
Query: 560 IPLVVYPNSGERYD 573
+PLVVY N GE YD
Sbjct: 273 VPLVVYSNRGEIYD 286
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447
S L+ V + +DG PLW S F AT DAV+QTH DF++
Sbjct: 27 SQLARNVNEKVDGDPLWGSRFDATQPDAVIQTHLDFLR 64
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 473 VDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 508
V +V +WL G ++GGCCR Y +D ++ ++D
Sbjct: 299 VASFVPEWLRLGARIIGGCCRVYPDDIYEIRQTIED 334
>gi|195387966|ref|XP_002052663.1| GJ17676 [Drosophila virilis]
gi|194149120|gb|EDW64818.1| GJ17676 [Drosophila virilis]
Length = 350
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 182/414 (43%), Gaps = 119/414 (28%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT AVV+TH DF++ GADI++TN+YQ+S+ GF
Sbjct: 23 GGFSSQLARNVQEKVDGDPLWGSRFDATQPAAVVKTHLDFLRNGADIILTNTYQSSVEGF 82
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIA-----LEATHARIRSDDPARDILIAGSVGPYGA 123
M+ L + S +LI SV ++A + L ++ I D P I S+GPYGA
Sbjct: 83 MKHLGKSREESIELIAKSVHLARQAKSQHLGELATSNGNIAPDMP----WIMASIGPYGA 138
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
L DGSEY G Y V+ + +WH +
Sbjct: 139 HLHDGSEYAGSYANLVNFTQLQQWHTV--------------------------------- 165
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSC 242
RI + AG D LA+ET+P EA + L L + + W+SF C
Sbjct: 166 --------------RIDTCLSAGVDGLAVETLPCQLEAMAVTELILSRYATARFWVSFQC 211
Query: 243 KDDKHISNGESFTQVARTCYNMNPD-----QLIAVGVNCVRPLMVSSLIEQLKT-----E 292
KD +++GESF Q A + + + +L+ +GVNCV P V+ L++ L E
Sbjct: 212 KDASSLAHGESFAQAAMAVWRLVQEFKAQSRLLGIGVNCVNPSYVTPLLKSLLAITPPDE 271
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
IPLVVY N GE
Sbjct: 272 KIPLVVYSNRGE------------------------------------------------ 283
Query: 353 GERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
YD+ W L V +V +WL G ++GGCCR Y +D L +++ +D
Sbjct: 284 --IYDSERGEWTGNGL--NVTSFVPEWLQLGARIIGGCCRVYPDDILEIRNTID 333
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 510 DDKHISNGESFTQVARTCYNMNPD-----QLIAVGVNCVRPLMVSPLIEQLKT-----EN 559
D +++GESF Q A + + + +L+ +GVNCV P V+PL++ L E
Sbjct: 213 DASSLAHGESFAQAAMAVWRLVQEFKAQSRLLGIGVNCVNPSYVTPLLKSLLAITPPDEK 272
Query: 560 IPLVVYPNSGERYD 573
IPLVVY N GE YD
Sbjct: 273 IPLVVYSNRGEIYD 286
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 473 VDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
V +V +WL G ++GGCCR Y +D L +++ +D
Sbjct: 299 VTSFVPEWLQLGARIIGGCCRVYPDDILEIRNTID 333
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNS 460
S L+ V + +DG PLW S F AT AVV+TH DF++ Y S
Sbjct: 27 SQLARNVQEKVDGDPLWGSRFDATQPAAVVKTHLDFLRNGADIILTNTYQS 77
>gi|410920922|ref|XP_003973932.1| PREDICTED: homocysteine S-methyltransferase 1-like [Takifugu
rubripes]
Length = 326
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 187/403 (46%), Gaps = 108/403 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L T G + G PLWS+ L T A+ H F+ +GAD++ T +YQAS+
Sbjct: 18 ILDGGLATELETQ-GFHLQGDPLWSARLLHTNPQAIRDAHGRFLLSGADVISTATYQASV 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + + LI S+V KEA+
Sbjct: 77 EGFIRHLHVSSECAKDLIMSAVQLAKEAVK------------------------------ 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+V +T +R L+AGSVGPYGA L +GSEY GDY E
Sbjct: 107 --------SFVSETHPST------------SRCPLVAGSVGPYGAFLHNGSEYTGDYAEQ 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + WHRP+I+ L AGAD+LA ETIP+ KEA+ L LL+E+P+ KAWL+ SCKD
Sbjct: 147 MSVQELKAWHRPQIECLAAAGADLLAFETIPSIKEAEALVELLKEFPNTKAWLALSCKDV 206
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ---LKTENIPLVVYPNS 302
+ +S+G F + QLIAVGVNC P +V L+E L I VVYPNS
Sbjct: 207 RSLSDGSPFADAVQMANRSQ--QLIAVGVNCCPPQLVEPLLESARCLLRPEISWVVYPNS 264
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +W +++ W +TE+ PL+
Sbjct: 265 GE----------------------DWDSEQGWT----ETESSPLI--------------- 283
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ W+ +G AL+GGCCR ++H L
Sbjct: 284 -----------EMSRTWMKQGAALIGGCCRISPAHIAKLRHHL 315
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQ---LKTENIPLVVYP 566
D + +S+G F + QLIAVGVNC P +V PL+E L I VVYP
Sbjct: 205 DVRSLSDGSPFADAVQMANRSQ--QLIAVGVNCCPPQLVEPLLESARCLLRPEISWVVYP 262
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 263 NSGEDWD 269
>gi|45360513|ref|NP_988891.1| uncharacterized protein LOC394486 [Xenopus (Silurana) tropicalis]
gi|37589988|gb|AAH59753.1| hypothetical protein MGC75760 [Xenopus (Silurana) tropicalis]
Length = 307
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 169/345 (48%), Gaps = 69/345 (20%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
VK++ GG S++L G ++ G PLWS+ L T A+ H F+K+GA+++ T +YQA
Sbjct: 5 VKILSGGLSTELENS-GFLLQGDPLWSARLLQTNPQAIKNVHTSFLKSGAEVLSTATYQA 63
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S+ GF E L L D +L V KEA A I+ + R+ILIAGS+GPYGA
Sbjct: 64 SVKGFQEHLGLSIDEVAELFHVGVRLAKEAA------AEIKDN---RNILIAGSIGPYGA 114
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
L DGSEY G+Y+ ++S + +WHRL
Sbjct: 115 FLSDGSEYTGNYLRNMSVEELKDWHRL--------------------------------- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++Q L AG ++ A+ETIP KEA+ L LLRE+P+ AWLS+SC+
Sbjct: 142 --------------QMQCLASAGIELFALETIPGQKEAEALLELLREFPNTNAWLSYSCR 187
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE---NIPLVVYP 300
D S G++F + + QL+AVG+NC P VSSL+ +I +VYP
Sbjct: 188 DMSSTSYGDAFEKAVGIAH--KSKQLVAVGMNCCPPTFVSSLLTSANKNRGLDIGWIVYP 245
Query: 301 NSGE---HILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCKT 341
NSG+ H L + + L EW N A W+ C T
Sbjct: 246 NSGKIWDHNLGWQ---GGGTEKTLSEYALEWVNLGAKWIGGCCTT 287
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 50/157 (31%)
Query: 286 IEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN- 343
+E+LK + + ++G + A+ETIP KEA+ L LLRE+PN AWLS+SC+ +
Sbjct: 132 VEELKDWHRLQMQCLASAGIELFALETIPGQKEAEALLELLREFPNTNAWLSYSCRDMSS 191
Query: 344 -----------------------------------------------IPLVVYPNSGERY 356
I +VYPNSG+ +
Sbjct: 192 TSYGDAFEKAVGIAHKSKQLVAVGMNCCPPTFVSSLLTSANKNRGLDIGWIVYPNSGKIW 251
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D N W + + +Y +W++ G +GGCC T
Sbjct: 252 DH-NLGWQGGGTEKTLSEYALEWVNLGAKWIGGCCTT 287
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE---NIPLVVYP 566
D S G++F + + QL+AVG+NC P VS L+ +I +VYP
Sbjct: 188 DMSSTSYGDAFEKAVGIAHK--SKQLVAVGMNCCPPTFVSSLLTSANKNRGLDIGWIVYP 245
Query: 567 NSGERYDFHLA 577
NSG+ +D +L
Sbjct: 246 NSGKIWDHNLG 256
>gi|56207591|emb|CAI21298.1| novel protein containing a homocysteine S-methyltransferase domain
[Danio rerio]
Length = 318
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 64/344 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L G + G PLWS+ L T A+ H ++++G+D++ T +YQASI
Sbjct: 14 ILDGGLATELEAS-GFQLQGDPLWSARVLHTDPQAIKDVHYRYLQSGSDVITTATYQASI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+++L + + + ++ S+V KE ++
Sbjct: 73 EGFVKYLGVQPEEAQHMMMSAVQLAKETVS------------------------------ 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E +S++ M++ R+ L+AGSVGPYG+ L DGSEY G Y +
Sbjct: 103 -----------EFISQSPMSD---------RREPLVAGSVGPYGSFLHDGSEYTGAYEDK 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC--- 242
++ + +WHRP+IQ LV+AGAD++A+ETIP KEA+ L ++L+E+P KAWLSFS
Sbjct: 143 MTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSSINL 202
Query: 243 -KDDKHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE---NIPLV 297
+D+ IS+G F++ V C + QL+AVGVNC L+V L+E K+ ++ V
Sbjct: 203 FQDNNSISSGRRFSEAVEMACRST---QLVAVGVNCCPALLVKPLLESAKSHKRADLSWV 259
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA-WLSFSCK 340
VYPNSGE + T ++ L EW Q A W+ C+
Sbjct: 260 VYPNSGEG-WDVTTGWKTEMRTSFANLSLEWKAQGALWIGGCCR 302
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 55/171 (32%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+E+LK + P + +G ++A+ETIP KEA+ L ++L+E+P KAWLSFS
Sbjct: 145 VEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSSINLFQ 204
Query: 339 ------------------CKTENI--------------PL--------------VVYPNS 352
C++ + PL VVYPNS
Sbjct: 205 DNNSISSGRRFSEAVEMACRSTQLVAVGVNCCPALLVKPLLESAKSHKRADLSWVVYPNS 264
Query: 353 GERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
GE +D V W ++ +W +G +GGCCR D +K
Sbjct: 265 GEGWD-VTTGW-KTEMRTSFANLSLEWKAQGALWIGGCCRVRPADITELKQ 313
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 510 DDKHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE---NIPLVVY 565
D+ IS+G F++ V C + QL+AVGVNC L+V PL+E K+ ++ VVY
Sbjct: 205 DNNSISSGRRFSEAVEMACRST---QLVAVGVNCCPALLVKPLLESAKSHKRADLSWVVY 261
Query: 566 PNSGERYD 573
PNSGE +D
Sbjct: 262 PNSGEGWD 269
>gi|419926004|ref|ZP_14443818.1| homocysteine methyltransferase [Escherichia coli 541-15]
gi|432527781|ref|ZP_19764863.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
gi|388384604|gb|EIL46323.1| homocysteine methyltransferase [Escherichia coli 541-15]
gi|431061547|gb|ELD70848.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
Length = 310
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPR++AL++AGAD+LA ET+P+ E + L LL E+P +AW SF+ +D
Sbjct: 143 AGEFTA--FHRPRVEALLDAGADLLACETLPSFTEIKALAALLAEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ ++ L++ ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVSAL--ANSPQIVALGINCIALENTTAALKHLQSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 269 HHGGACETLAGYLPQWLEAGAKLIGGCCRTTPKD 302
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + ++ L++ ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVVSAL--ANSPQIVALGINCIALENTTAALKHLQSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 470 CEPVDKYVTDWLDEGVALVGGCCRTYAED 498
CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 274 CETLAGYLPQWLEAGAKLIGGCCRTTPKD 302
>gi|156382071|ref|XP_001632378.1| predicted protein [Nematostella vectensis]
gi|156219433|gb|EDO40315.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 150/284 (52%), Gaps = 56/284 (19%)
Query: 22 IIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQ 81
+ G PLWS+ L +AV Q H+ F+ G+DI+ T +YQASI GF + L + D + +
Sbjct: 2 FMQGDPLWSARVLVENPEAVKQVHKSFLTHGSDIITTATYQASISGFCKHLGVTADEARK 61
Query: 82 LIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 141
LI+ V H++
Sbjct: 62 LIQRGV--------------------------------------------------HIAR 71
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA 201
++ E+ ++ P +AGSV PYG DGSEY G+YV+ ++ + +WHRP+IQA
Sbjct: 72 ESVDEFWDKHSNSPQ----VAGSVCPYGTCQSDGSEYHGNYVDTMTIKNLMDWHRPQIQA 127
Query: 202 LVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTC 261
LVE G D+LA ETIPA KE + L +LL+E+P KAWLS+SCKD H S+ E F
Sbjct: 128 LVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYSCKDGSHTSHNEDFVSAIMAA 187
Query: 262 YNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+ +Q+IAVG NC P+ V+SLI +LK + +P+V+YPN GE
Sbjct: 188 V-ADSEQIIAVGNNCCSPVYVTSLIRRLKPKTTLPIVIYPNKGE 230
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 51/162 (31%)
Query: 275 NCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
N V + + +L++ + + LV +G +LA ETIPA KE + L +LL+E+P KAW
Sbjct: 107 NYVDTMTIKNLMDWHRPQIQALV---ETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAW 163
Query: 335 LSFSCK-----------------------------------------------TENIPLV 347
LS+SCK +P+V
Sbjct: 164 LSYSCKDGSHTSHNEDFVSAIMAAVADSEQIIAVGNNCCSPVYVTSLIRRLKPKTTLPIV 223
Query: 348 VYPNSGERY-DAVNARWIDRDLCEPVDKYVTDWLDEGVALVG 388
+YPN GE + D + W D PV Y+ +W+D G +G
Sbjct: 224 IYPNKGEEWIDRRYSEWQDTGNVPPVVSYLDEWIDSGAQWIG 265
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D H S+ E F + +Q+IAVG NC P+ V+ LI +LK + +P+V+YPN
Sbjct: 170 DGSHTSHNEDFVSAIMAAV-ADSEQIIAVGNNCCSPVYVTSLIRRLKPKTTLPIVIYPNK 228
Query: 569 GERY 572
GE +
Sbjct: 229 GEEW 232
>gi|334123253|ref|ZP_08497281.1| homocysteine S-methyltransferase [Enterobacter hormaechei ATCC
49162]
gi|333390875|gb|EGK62000.1| homocysteine S-methyltransferase [Enterobacter hormaechei ATCC
49162]
Length = 351
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 181/399 (45%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NAQAGTLLVAGSVGPYGAYLADGSEYRGDYVRR 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T E+HRPR++AL++AGAD+LA ET+P+ E + L LL +P +AW SF+ +D
Sbjct: 143 AEEFT--EFHRPRVEALLDAGADLLACETLPSFPEIKALAALLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V N Q++A+G+NC+ ++ + L + ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVSVLENY--PQVVALGINCIALENTTAALTHLHSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
+ CE + Y+ WL+ G L+GGCCRT +D +K
Sbjct: 269 HHGEACETLAGYLPQWLEAGAKLIGGCCRTTPKDIAELK 307
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V N Q++A+G+NC+ + + L + ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVSVLENY--PQVVALGINCIALENTTAALTHLHSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 503
+ CE + Y+ WL+ G L+GGCCRT +D +K
Sbjct: 272 EACETLAGYLPQWLEAGAKLIGGCCRTTPKDIAELK 307
>gi|375311326|ref|ZP_09776581.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus sp. Aloe-11]
gi|375076506|gb|EHS54759.1| homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Paenibacillus sp. Aloe-11]
Length = 315
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 180/393 (45%), Gaps = 104/393 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L +A+ + H+D+ +AGAD +T SYQA++
Sbjct: 15 VLDGAMATELERQGHDLNDS--LWSAKILHEHPEAIKRVHKDYFEAGADCAITASYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G+++ + E ALE + +R ARD A +
Sbjct: 73 EGYVQ-----------------RGLSENEALELIQSSVRIAVQARDEFWAEAANAANQQH 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R L+A SVGPYGA L DGSEYRGDY
Sbjct: 116 RPKP------------------------------LVAASVGPYGAFLADGSEYRGDY--E 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGADILA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 144 LSEEQLVEFHRPRMKALIEAGADILACETIPCLVEAKAIARLLKEFPGTYAWISFSAKDG 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HISNGE+ A + + +Q+ AVG+NC P + SLI+++++ + P+VVYPN GE
Sbjct: 204 QHISNGETAAACAE--WLNDHEQVAAVGLNCTLPKFIPSLIQEMRSHTDKPVVVYPNLGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V W
Sbjct: 262 --------------------------------------------------EYDPVTKTWH 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E + W + G L+GGCCRT +D
Sbjct: 272 GHTCAETFGQSARQWYEAGARLIGGCCRTQPQD 304
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HISNGE+ A + + +Q+ AVG+NC P + LI+++++ + P+VVYPN
Sbjct: 202 DGQHISNGETAAACAE--WLNDHEQVAAVGLNCTLPKFIPSLIQEMRSHTDKPVVVYPNL 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEEYD 264
>gi|345298028|ref|YP_004827386.1| homocysteine S-methyltransferase [Enterobacter asburiae LF7a]
gi|345091965|gb|AEN63601.1| homocysteine S-methyltransferase [Enterobacter asburiae LF7a]
Length = 310
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 182/401 (45%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 ILDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDDAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPR++AL++AGAD+LA ET+P+ E++ L LL E+P +AW SF+ +D
Sbjct: 143 AEEFTA--FHRPRVEALLDAGADLLACETLPSFAESKALAALLSEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V Q++A+G+NC+ ++ + L++ ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVIAELVRY--PQIVALGINCIALENTTAALHYLQSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ CE + Y+ WL G L+GGCCRT +D + R
Sbjct: 269 HHGEACEALAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V Q++A+G+NC+ + + L++ ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVIAELVRY--PQIVALGINCIALENTTAALHYLQSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
+ CE + Y+ WL G L+GGCCRT +D + R
Sbjct: 272 EACEALAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
>gi|146310490|ref|YP_001175564.1| homocysteine methyltransferase [Enterobacter sp. 638]
gi|145317366|gb|ABP59513.1| homocysteine S-methyltransferase [Enterobacter sp. 638]
Length = 311
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 179/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L D + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY+
Sbjct: 103 --------------REAYLAE------NAHAGTLLVAGSVGPYGAYLADGSEYRGDYLRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T E+HRPR++AL++AGAD+LA ET+P+ E + L LL E+P +AW SF+ ++
Sbjct: 143 AQEFT--EFHRPRVEALLDAGADLLACETLPSFAEIKALAALLSEYPRARAWFSFTLRES 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + Q++A+G+NC+ ++ +E L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVAALADY--PQIVALGINCIALENTTAALEHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACETLSGYLPHWLAAGAKLIGGCCRTTPKD 302
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
+ +H+S+G +V + Q++A+G+NC+ + +E L + +PLVVYPNS
Sbjct: 199 ESEHLSDGTPLREVVAALADY--PQIVALGINCIALENTTAALEHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|383763011|ref|YP_005441993.1| homocysteine S-methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383279|dbj|BAM00096.1| homocysteine S-methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 322
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 181/405 (44%), Gaps = 109/405 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V +IDG +++L D+ D LWS+ L A + + H D+++AGAD+++T SYQ
Sbjct: 13 GVIIIDGALATELERRGADLSDA--LWSARLLIDAPELIRSVHLDYLRAGADVLITASYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI GF L+ L + SV EAI
Sbjct: 71 ASIEGFKR-RGLNEAQVRNLFRLSVQLAAEAIE--------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR-DILIAGSVGPYGASLRDGSEYRGD 181
E+++E PAR LIA S+GPYGA L DGSEYRGD
Sbjct: 103 --------------EYLAETQAG---------PARLPPLIAASIGPYGAYLADGSEYRGD 139
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V EA +A WHRPR+ AL E AD+ A ETIP EA+ L RLL E+P AWLSFS
Sbjct: 140 YGLSV-EALIA-WHRPRVSALAETEADLFACETIPCLAEAEALIRLLEEYPDMPAWLSFS 197
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
C+D + +S+GE F + R +Q++AVGVNC P V SL++ + + PL+ YP
Sbjct: 198 CRDGESLSSGEPFAEAVRLANRS--EQIVAVGVNCTAPRFVESLLQIARPLTDKPLLCYP 255
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE + +A+ C W+ + T
Sbjct: 256 NSGE----------AWDAEARC-----------WVEGTGVT------------------- 275
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D EP + W G L+GGCCRT D M L
Sbjct: 276 ------DFAEPARR----WYAAGARLIGGCCRTTPADIAAMAQAL 310
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D + +S+GE F + R +Q++AVGVNC P V L++ + + PL+ YPNS
Sbjct: 200 DGESLSSGEPFAEAVRLANRS--EQIVAVGVNCTAPRFVESLLQIARPLTDKPLLCYPNS 257
Query: 569 GERYD 573
GE +D
Sbjct: 258 GEAWD 262
>gi|194759568|ref|XP_001962019.1| GF14646 [Drosophila ananassae]
gi|190615716|gb|EDV31240.1| GF14646 [Drosophila ananassae]
Length = 329
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 184/409 (44%), Gaps = 114/409 (27%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GGFSSQL+ V + +DG PLW S F AT +AV++TH DF+ +GADI++TN+YQ+S+ GF
Sbjct: 18 GGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIKTHLDFLHSGADIILTNTYQSSVDGF 77
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+++L + + +LI+ SV +EA +A + + + D +++A S+GPYGA L DG
Sbjct: 78 VKYLGVSKERGKELIRKSVQLAQEA---KAQYLKETASDSTLPLILA-SIGPYGACLHDG 133
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
SEY G Y + +++ + EWH
Sbjct: 134 SEYSGSYADKITKKQLQEWH---------------------------------------- 153
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL-LREWPHQKAWLSFSCKDDKH 247
R RI+ + G + LA+ET+P EA+ + L L + W+SF C+D+
Sbjct: 154 -------RTRIEICLAEGVNGLALETLPCQLEAEAVTELVLDSYEGVNFWVSFQCQDNAR 206
Query: 248 ISNGESFTQVARTCYNMNPD-----QLIAVGVNCVRPLMVSSLIEQL-----KTENIPLV 297
+++GES+ Q A + + + +L+ +GVNCV P V+ L+ E IPLV
Sbjct: 207 LASGESYAQAALSIWRLVQQRQAQHRLLGIGVNCVNPQFVTPLLTSFLKAAGSNEKIPLV 266
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VY N GE A Q W +GE+
Sbjct: 267 VYSNRGEIYDA---------------------EQGEW---------------TGTGEQVV 290
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
WI G +VGGCCR Y D L ++ +D
Sbjct: 291 KFVPEWIQL----------------GAGIVGGCCRVYPSDVLEIRQYVD 323
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQ-----LIAVGVNCVRPLMVSPLIEQL-----KTEN 559
D+ +++GES+ Q A + + + + L+ +GVNCV P V+PL+ E
Sbjct: 203 DNARLASGESYAQAALSIWRLVQQRQAQHRLLGIGVNCVNPQFVTPLLTSFLKAAGSNEK 262
Query: 560 IPLVVYPNSGERYD 573
IPLVVY N GE YD
Sbjct: 263 IPLVVYSNRGEIYD 276
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 471 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
E V K+V +W+ G +VGGCCR Y D L ++ +D
Sbjct: 287 EQVVKFVPEWIQLGAGIVGGCCRVYPSDVLEIRQYVD 323
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 410 SGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFI 446
S L+ V + +DG PLW S F AT +AV++TH DF+
Sbjct: 22 SQLAKNVTEKVDGDPLWGSRFDATNPEAVIKTHLDFL 58
>gi|384048566|ref|YP_005496583.1| Homocysteine S-methyltransferase ybgG [Bacillus megaterium WSH-002]
gi|345446257|gb|AEN91274.1| Homocysteine S-methyltransferase ybgG [Bacillus megaterium WSH-002]
Length = 311
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 188/395 (47%), Gaps = 107/395 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L Y D+ D LWS+ L + + + H+D+ AGAD +T SYQ+
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ GF + R S+ AR+++ A
Sbjct: 71 TFEGFAK-------------------------------RGLSEAEARELI--------QA 91
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
S++ +E R ++ + E +RL P ++A SVGPYGA L +GSEY G Y
Sbjct: 92 SVKIAAEARDEFWQQ-------EENRLNRPKP----IVAASVGPYGAFLANGSEYTGQY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V+E + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL E+ AW++FS K
Sbjct: 140 -DVTEEELMEFHRPRMKALIEAGADVLACETIPNVMEARAIARLLEEFEGAYAWITFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNS 302
DD HIS+G ++ AR Y + +Q+ A+GVNC P +SSLI+++K++ + P++VYPNS
Sbjct: 199 DDLHISSGTLISECAR--YLNSYEQIAALGVNCTPPQYISSLIKEIKSQTDKPVIVYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GEH YDA +
Sbjct: 257 GEH--------------------------------------------------YDAESKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W E W + G L+GGCCRT +D
Sbjct: 267 WNGTSAGETYGCSAHSWYEAGAQLIGGCCRTTPDD 301
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
DD HIS+G ++ AR Y + +Q+ A+GVNC P +S LI+++K++ + P++VYPNS
Sbjct: 199 DDLHISSGTLISECAR--YLNSYEQIAALGVNCTPPQYISSLIKEIKSQTDKPVIVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|261340957|ref|ZP_05968815.1| homocysteine S-methyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288316817|gb|EFC55755.1| homocysteine S-methyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 310
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSRVLIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NANAGTLLVAGSVGPYGAYLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPR++AL++AGAD+LA ET+P+ E + L LL E+P +AW SF+ +D
Sbjct: 143 AEEFT--RFHRPRVEALLDAGADLLACETLPSFAEIKALASLLAEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G + +V + Q++A+G+NC+ ++ ++ L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTALREVVSALSHY--PQIVALGINCIALENTTAALKHLNSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGYLPQWLEAGAKLIGGCCRTTPKD 302
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G + +V + Q++A+G+NC+ + ++ L + +PLVVYPNS
Sbjct: 199 DSEHLSDGTALREVVSALSHY--PQIVALGINCIALENTTAALKHLNSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 272 EACETLAGYLPQWLEAGAKLIGGCCRTTPKD 302
>gi|451819335|ref|YP_007455536.1| homocysteine S-methyltransferase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785314|gb|AGF56282.1| homocysteine S-methyltransferase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 312
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 180/393 (45%), Gaps = 107/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L DI D LWS+ LA + + + H D+ AGAD +T+SYQA+I
Sbjct: 15 ILDGALATELENRGCDINDS--LWSAKILAEKPEMIGKVHYDYFAAGADCAITSSYQATI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF++ + LIK SV K+A
Sbjct: 73 DGFVQ-KGFSEAEAISLIKRSVQIAKKA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+ W+ L+AGSVGPYGA L DGSEYRGDY +
Sbjct: 100 ------RDDF-----------WNNSENRKNRPTPLVAGSVGPYGAYLADGSEYRGDY--N 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E + +HRPRI+ L+E G DILA ETIP+ EA+ + +LL+E+P+ W+SFSCK++
Sbjct: 141 ITEEELISFHRPRIKLLIEEGVDILACETIPSLMEAKAIIKLLKEFPNVYCWISFSCKNE 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
IS+G + A++ + + Q+ A+G+NC P V LI ++K N P+VVYPNSGE
Sbjct: 201 LEISDGTPIAECAKSLDDYS--QVAAIGLNCTAPQYVQLLITEIKNNSNKPIVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
A N K W + NS NA+
Sbjct: 259 KYDA---------------------NSKTW--------------HGNSSSHSYCCNAK-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + G LVGGCCRT ED
Sbjct: 282 -------------GWFEAGAKLVGGCCRTTPED 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++ IS+G + A++ + + Q+ A+G+NC P V LI ++K N P+VVYPNS
Sbjct: 199 NELEISDGTPIAECAKSLDDYS--QVAAIGLNCTAPQYVQLLITEIKNNSNKPIVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEKYD 261
>gi|392977804|ref|YP_006476392.1| homocysteine methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392323737|gb|AFM58690.1| homocysteine methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 310
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYVRR 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPRI+AL++AGAD+LA ET+P+ +E + L LL E+P +AW SF+ +D
Sbjct: 143 AEEFTA--FHRPRIEALLDAGADLLACETLPSFEEIKTLAALLAEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + Q++A+G+NC+ ++ ++ L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVAAL--KDNAQVVALGINCIALENTTAALKHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGYLPQWLEAGARLIGGCCRTTPKD 302
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + Q++A+G+NC+ + ++ L + +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVVAAL--KDNAQVVALGINCIALENTTAALKHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 272 EACETLAGYLPQWLEAGARLIGGCCRTTPKD 302
>gi|333928501|ref|YP_004502080.1| Homocysteine S-methyltransferase [Serratia sp. AS12]
gi|333933454|ref|YP_004507032.1| Homocysteine S-methyltransferase [Serratia plymuthica AS9]
gi|386330324|ref|YP_006026494.1| Homocysteine S-methyltransferase [Serratia sp. AS13]
gi|333475061|gb|AEF46771.1| Homocysteine S-methyltransferase [Serratia plymuthica AS9]
gi|333492561|gb|AEF51723.1| Homocysteine S-methyltransferase [Serratia sp. AS12]
gi|333962657|gb|AEG29430.1| Homocysteine S-methyltransferase [Serratia sp. AS13]
Length = 312
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 182/405 (44%), Gaps = 110/405 (27%)
Query: 2 ANVKLI-DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
AN LI DG +++L D+ D PLWS+ L + + Q H D+ AGA +T S
Sbjct: 13 ANRTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITAS 70
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF+ L+ S LI SV ++A
Sbjct: 71 YQATPLGFLRR-GLNQQQSLALIAKSVQLAQQA--------------------------- 102
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R DY+ +A +LIAGSVGPYGA L DGSEYRG
Sbjct: 103 -----------RSDYLAQHPQAA--------------PLLIAGSVGPYGAYLADGSEYRG 137
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + + M +HRPRI AL EAG D+LA ET+P+ E Q L LL+E+P AW +F
Sbjct: 138 DY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALLTLLQEFPTLGAWFAF 195
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +D +H+S+G TQV + NP Q++A+G+NC+ V+ + QL T + PL+VY
Sbjct: 196 TLRDSQHLSDGTPLTQVLAALHG-NP-QVLAMGINCIALENVTPALRQLATLTDKPLLVY 253
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGEH A+ K W +C EN L+
Sbjct: 254 PNSGEHYDAVT---------------------KTW--HACGGENGSLI------------ 278
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ +W + G L+GGCCRT +D + R
Sbjct: 279 --------------DQIGEWQNIGARLIGGCCRTTPQDIRQIAAR 309
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G TQV + NP Q++A+G+NC+ V+P + QL T + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTQVLAALHG-NP-QVLAMGINCIALENVTPALRQLATLTDKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|296101466|ref|YP_003611612.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055925|gb|ADF60663.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 310
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 182/394 (46%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADN--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRR 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPRI+AL++AGAD+LA ET+P+ +E + L L+ E+P +AW SF+ +D
Sbjct: 143 AEEFTA--FHRPRIEALLDAGADLLACETLPSFEEIKALAALVAEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + + Q++A+G+NC+ ++ ++ L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLLEVVAALKDNS--QVVALGINCIALENTTAALKHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGYLPQWLEAGARLIGGCCRTTPKD 302
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + + Q++A+G+NC+ + ++ L + +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLLEVVAALKDNS--QVVALGINCIALENTTAALKHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 272 EACETLAGYLPQWLEAGARLIGGCCRTTPKD 302
>gi|386078276|ref|YP_005991801.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis PA13]
gi|354987457|gb|AER31581.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis PA13]
Length = 311
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 180/394 (45%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ S LI SV+ K A
Sbjct: 75 QGFAA-RGLNETQSLALIAQSVELAKRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ AT AE A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RADYL-----ATQAE---------AKILLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPRI AL+ AG D+LA ET+P+ EAQ L LL E+P +AW SF+ +D
Sbjct: 140 LPEAEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
+HIS+G +VA N P Q++A+G+NC+ V+ ++QL + + PLVVYPNSGE
Sbjct: 200 EHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ ++W G L+GGCCRT +D
Sbjct: 268 SAPSGCTLHDKF-SEWQQAGARLIGGCCRTSPKD 300
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D +HIS+G +VA N P Q++A+G+NC+ V+P ++QL + + PLVVYPNS
Sbjct: 198 DAEHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|423112758|ref|ZP_17100449.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376390252|gb|EHT02938.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5245]
Length = 310
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 180/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L LD S LI SV+ ++A
Sbjct: 76 AGFAA-LGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAFLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S+ +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SDEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVVAVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + +Y+ WL G L+GGCCRT +D + R
Sbjct: 269 RHGEACATLAEYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVVAVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|423106875|ref|ZP_17094570.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5243]
gi|376389001|gb|EHT01693.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5243]
Length = 310
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 180/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L LD S LI SV+ ++A
Sbjct: 76 AGFAA-LGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAFLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S+ +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SDEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + + PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTVLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + +Y+ WL G L+GGCCRT +D + R
Sbjct: 269 RHGEACATLAEYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + + PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|330006839|ref|ZP_08305716.1| homocysteine S-methyltransferase [Klebsiella sp. MS 92-3]
gi|328535720|gb|EGF62164.1| homocysteine S-methyltransferase [Klebsiella sp. MS 92-3]
Length = 310
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 178/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A+
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKAL------------------------------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 104 ---------------EAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A +HRPR++AL++AGAD+LA ET+P+ E Q L LL+E+P +AW SF+ +D
Sbjct: 141 RSAAEFQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQEYPRARAWYSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACASLADYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|295096844|emb|CBK85934.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 310
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 179/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NAQAGTLLVAGSVGPYGAYLADGSEYRGDYVRR 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPR++AL++AGAD+LA ET+P+ E ++L +L +P +AW SF+ +D
Sbjct: 143 AEEFTA--FHRPRVEALLDAGADLLACETLPSFPEIKVLAAMLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V + Q++A+G+NC+ ++ + L + ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVSALESY--PQVVALGINCIALENTTAALTHLHSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D CE + Y+ WLD G L+GGCCRT +D
Sbjct: 269 HHGDACETLAGYLPQWLDAGAKLIGGCCRTTPQD 302
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + + L + ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVSALESY--PQVVALGINCIALENTTAALTHLHSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
D CE + Y+ WLD G L+GGCCRT +D
Sbjct: 272 DACETLAGYLPQWLDAGAKLIGGCCRTTPQD 302
>gi|423369559|ref|ZP_17346989.1| hypothetical protein IC3_04658 [Bacillus cereus VD142]
gi|401076901|gb|EJP85247.1| hypothetical protein IC3_04658 [Bacillus cereus VD142]
Length = 325
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 184/409 (44%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ E T H+ L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 --------------DFWKENTQTNRHK---------PLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W D + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHDHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|293395015|ref|ZP_06639302.1| homocysteine S-methyltransferase [Serratia odorifera DSM 4582]
gi|291422422|gb|EFE95664.1| homocysteine S-methyltransferase [Serratia odorifera DSM 4582]
Length = 318
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 181/401 (45%), Gaps = 109/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L T D+ D PLWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 23 ILDGALATELETRGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 80
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ LD S LI SV ++A
Sbjct: 81 QGFLRR-GLDEQQSLALIAKSVQLAQQA-------------------------------- 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ +A +LIAGSVGPYGA L DGSEYRGDY
Sbjct: 108 ------RRDYLAQRPQA--------------EPLLIAGSVGPYGAFLADGSEYRGDY--R 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A M +HRPRI AL +AG D+LA ET+P+ E L LLR++P AW SF+ +D
Sbjct: 146 LPAAEMIAFHRPRIAALAQAGVDLLACETLPSFDELHALLTLLRDFPSLGAWFSFTLRDS 205
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G T+V N NP Q++A+GVNC+ V+ ++ L T ++PL+VYPNSGE
Sbjct: 206 HHLSDGTPLTEVI-ALLNHNP-QVLAIGVNCIALENVTPALQTLATLTSLPLLVYPNSGE 263
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H A+ K W +C G Y +++
Sbjct: 264 HYDAVS---------------------KTW--HAC-------------GGEYGSLS---- 283
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ DW G L+GGCCRT +D + +L
Sbjct: 284 ---------EQAGDWQQIGARLIGGCCRTTPKDIRAIAEQL 315
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G T+V N NP Q++A+GVNC+ V+P ++ L T ++PL+VYPNS
Sbjct: 204 DSHHLSDGTPLTEVI-ALLNHNP-QVLAIGVNCIALENVTPALQTLATLTSLPLLVYPNS 261
Query: 569 GERYD 573
GE YD
Sbjct: 262 GEHYD 266
>gi|423531861|ref|ZP_17508286.1| hypothetical protein IGE_05393 [Bacillus cereus HuB1-1]
gi|402443260|gb|EJV75170.1| hypothetical protein IGE_05393 [Bacillus cereus HuB1-1]
Length = 325
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 189/417 (45%), Gaps = 111/417 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARKARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRPKP--LVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V V++ T+A++HR R+ AL+EAGAD+LA ETIP +EA++L LLRE+P AWLSFS
Sbjct: 143 V--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGD 418
W + C +D +W G L+GGCCRT H++ + W S Y+ +
Sbjct: 269 TWHGHEQCNTLDIQSKEWYQAGARLIGGCCRT---TPYHIEEISNKWRSSEFFYLNE 322
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|295702986|ref|YP_003596061.1| homocysteine S-methyltransferase [Bacillus megaterium DSM 319]
gi|294800645|gb|ADF37711.1| homocysteine S-methyltransferase [Bacillus megaterium DSM 319]
Length = 311
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 187/399 (46%), Gaps = 115/399 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L Y D+ D LWS+ L + + + H+D+ AGAD +T SYQ+
Sbjct: 13 VIVLDGAMATELERYSCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ GF + R S+ AR+++ A
Sbjct: 71 TFEGFAK-------------------------------RGLSEAEARELI--------QA 91
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWH----RLITDDPARDILIAGSVGPYGASLRDGSEYR 179
S++ +E R ++ WH RL P ++A SVGPYGA L +GSEY
Sbjct: 92 SVKIAAESRDEF-----------WHQEENRLNRPKP----IVAASVGPYGAFLANGSEYT 136
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239
G Y V+E + E+HRPR++AL+EAGAD+LA ETIP EA+ + +LL E+ AW++
Sbjct: 137 GQY--DVTEEELMEFHRPRMKALIEAGADVLACETIPNLMEARAIAKLLEEFEGAYAWIT 194
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVV 298
FS KDD HIS+G ++ AR Y + +Q+ A+GVNC P +SSLI+++K++ + P++V
Sbjct: 195 FSAKDDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIKEIKSQTDKPVIV 252
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGEH YDA
Sbjct: 253 YPNSGEH--------------------------------------------------YDA 262
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W E W + G L+GGCCRT +D
Sbjct: 263 ESKTWNGTSAGETYGCSAHSWYEAGAQLIGGCCRTTPDD 301
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
DD HIS+G ++ AR Y + +Q+ A+GVNC P +S LI+++K++ + P++VYPNS
Sbjct: 199 DDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIKEIKSQTDKPVIVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|255528284|ref|ZP_05395098.1| homocysteine S-methyltransferase [Clostridium carboxidivorans P7]
gi|255508019|gb|EET84445.1| homocysteine S-methyltransferase [Clostridium carboxidivorans P7]
Length = 310
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 179/393 (45%), Gaps = 107/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L +I D LWS+ LA + + H D+ AGAD +T+SYQASI
Sbjct: 15 ILDGALATELENRGCNINDA--LWSAKILAENPKMIEKVHYDYFCAGADCAITSSYQASI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF++ D + LIK SV K+A
Sbjct: 73 EGFIK-KGFSKDEAVSLIKRSVTIAKKA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+ + S +R+ P LIAGSVGPYGA L DGSEYRG
Sbjct: 100 ------REDFWKEPS-------NRVNRAFP----LIAGSVGPYGAYLADGSEYRG--YSS 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E + +HRPR++ LV DILA ET+P+ EA+ + +LL+E+P W+SFSCK+
Sbjct: 141 INEENLINFHRPRMEILVGEKVDILACETLPSLLEAKAIVKLLKEFPETYCWISFSCKNA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
IS+G ++ A+ + + +Q+ A+GVNC P V SLIE++ K N P+VVYPNSGE
Sbjct: 201 LEISDGTPISECAK--FLDSCEQVAAIGVNCTAPQYVQSLIEEIKKNSNKPVVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YDA + W
Sbjct: 259 E--------------------------------------------------YDANSKTWH 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C+ W D+G +++GGCCRT ED
Sbjct: 269 GNSSCKSYSCNAKGWFDKGASIIGGCCRTTPED 301
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 513 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGER 571
IS+G ++ A+ + + +Q+ A+GVNC P V LIE++K N P+VVYPNSGE
Sbjct: 202 EISDGTPISECAK--FLDSCEQVAAIGVNCTAPQYVQSLIEEIKKNSNKPVVVYPNSGEE 259
Query: 572 YD 573
YD
Sbjct: 260 YD 261
>gi|423602850|ref|ZP_17578849.1| hypothetical protein III_05651 [Bacillus cereus VD078]
gi|401223975|gb|EJR30536.1| hypothetical protein III_05651 [Bacillus cereus VD078]
Length = 325
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 190/409 (46%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+IGGF L+ ++ +LIK +V + A
Sbjct: 74 ATIGGFSACGILEQEA-LELIKKTVLLARRA----------------------------- 103
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 104 ---------RDDFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+ +
Sbjct: 259 SGE--------------------------------------------------TYNPESK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|291618538|ref|YP_003521280.1| MmuM [Pantoea ananatis LMG 20103]
gi|291153568|gb|ADD78152.1| MmuM [Pantoea ananatis LMG 20103]
Length = 341
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 179/394 (45%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 47 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 104
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ S LI SV+ K A
Sbjct: 105 QGFAA-RGLNETQSLALIAQSVELAKRA-------------------------------- 131
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ AT AE A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 132 ------RADYL-----ATQAE---------AKILLVAGSVGPYGAFLADGSEYRGDYA-- 169
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E M +HRPRI AL+ AG D+LA ET+P+ EAQ L LL E+P +AW SF+ +D
Sbjct: 170 LPETEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDA 229
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
+HIS+G +VA N P Q++A+G+NC+ V+ ++QL + + PLVVYPNSGE
Sbjct: 230 EHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNSGE 287
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 288 --------------------------------------------------QYDASSKTWH 297
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ ++W G L+GGCCRT +D
Sbjct: 298 SAPSGCTLHDKF-SEWQQAGARLIGGCCRTSPKD 330
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D +HIS+G +VA N P Q++A+G+NC+ V+P ++QL + + PLVVYPNS
Sbjct: 228 DAEHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNS 285
Query: 569 GERYD 573
GE+YD
Sbjct: 286 GEQYD 290
>gi|319648990|ref|ZP_08003199.1| YbgG protein [Bacillus sp. BT1B_CT2]
gi|423680619|ref|ZP_17655458.1| homocysteine methyltransferase [Bacillus licheniformis WX-02]
gi|317388984|gb|EFV69802.1| YbgG protein [Bacillus sp. BT1B_CT2]
gi|383441725|gb|EID49434.1| homocysteine methyltransferase [Bacillus licheniformis WX-02]
Length = 315
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 183/395 (46%), Gaps = 107/395 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L Y D+ D LWS+ L + + Q H D+ +AGAD +T SYQ+
Sbjct: 14 VIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQS 71
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
++ GF + L + LI+ SV E ARD A
Sbjct: 72 TVEGFTK-RGLSEQEALHLIRESVRLAAE----------------ARDEFWA-------- 106
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
A +R P +A SVGPYGA L DGSEYRG+Y
Sbjct: 107 ---------------------APENREGRPKP----FVAASVGPYGAFLADGSEYRGNY- 140
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V+E +A++HR R+ AL+EAGADILA ETIP EA+ + LL+E+P AW+SFS K
Sbjct: 141 -GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAKAIVHLLKEFPDTHAWISFSAK 199
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNS 302
D +HIS+G + A+ + DQ+ AVGVNC R VSSLI +K P++VYPNS
Sbjct: 200 DGRHISDGTKAGECAK--WLDQHDQVAAVGVNCTRLEHVSSLIGGIKKHTAKPIIVYPNS 257
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE P K W +CKT + GE +AR
Sbjct: 258 GEQYD---------------------PETKTWHGAACKT---------SFGE-----SAR 282
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W ++G L+GGCCRT ED
Sbjct: 283 ---------------SWYNQGAQLIGGCCRTTPED 302
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 492 CRTYAEDTLHMKHRLDD---W------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 542
C + A+ +H+ D W D +HIS+G + A+ + DQ+ AVGVNC
Sbjct: 173 CLSEAKAIVHLLKEFPDTHAWISFSAKDGRHISDGTKAGECAK--WLDQHDQVAAVGVNC 230
Query: 543 VRPLMVSPLIEQLKTENI-PLVVYPNSGERYD 573
R VS LI +K P++VYPNSGE+YD
Sbjct: 231 TRLEHVSSLIGGIKKHTAKPIIVYPNSGEQYD 262
>gi|401762462|ref|YP_006577469.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400173996|gb|AFP68845.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 310
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 180/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAYLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P+ E + L LL E+P +AW SF+ +D
Sbjct: 142 -SAEAFTAFHRPRVEALLDAGADLLACETLPSFGEIKALAALLAEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N ++A+G+NC+ ++ ++ L++ +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVDVL--ANSPHIVALGINCIALENTTAALKHLQSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ CE + Y+ WL G L+GGCCRT +D + +
Sbjct: 269 HHGEACETLAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAK 309
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N ++A+G+NC+ + ++ L++ +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVVDVL--ANSPHIVALGINCIALENTTAALKHLQSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|294497614|ref|YP_003561314.1| homocysteine S-methyltransferase [Bacillus megaterium QM B1551]
gi|294347551|gb|ADE67880.1| homocysteine S-methyltransferase [Bacillus megaterium QM B1551]
Length = 311
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 187/395 (47%), Gaps = 107/395 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L Y D+ D LWS+ L + + + H+D+ AGAD +T SYQ+
Sbjct: 13 VIVLDGAMATELERYGCDLNDS--LWSAKVLMEQPELIKRVHQDYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ GF + R S+ AR+++ A
Sbjct: 71 TFEGFAK-------------------------------RGLSEAEARELI--------QA 91
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
S++ +E R ++ + E +R P ++A SVGPYGA L +GSEY G Y
Sbjct: 92 SVKIAAEARDEFWQQ-------EENRRNRPKP----IVAASVGPYGAFLANGSEYTGQY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V+E + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL E+ AW++FS K
Sbjct: 140 -DVTEEELMEFHRPRMKALIEAGADVLACETIPNVMEARAIARLLEEFEGAYAWITFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNS 302
DD HIS+G ++ AR Y + +Q+ A+GVNC P +SSLI+++K++ + P++VYPNS
Sbjct: 199 DDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIKEIKSQTDKPVIVYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GEH YDA +
Sbjct: 257 GEH--------------------------------------------------YDAESKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W E W + G L+GGCCRT +D
Sbjct: 267 WNGTSAGETYGCSAHSWYEAGAQLIGGCCRTTPDD 301
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
DD HIS+G ++ AR Y + +Q+ A+GVNC P +S LI+++K++ + P++VYPNS
Sbjct: 199 DDLHISSGTLISECAR--YLDSYEQVAALGVNCTPPQYISSLIKEIKSQTDKPVIVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|378766021|ref|YP_005194482.1| homocysteine methyltransferase [Pantoea ananatis LMG 5342]
gi|365185495|emb|CCF08445.1| homocysteine methyltransferase [Pantoea ananatis LMG 5342]
Length = 311
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 179/394 (45%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ S LI SV+ K A
Sbjct: 75 QGFAA-RGLNETQSLALIAQSVELAKRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ AT AE A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RADYL-----ATQAE---------AKILLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E M +HRPRI AL+ AG D+LA ET+P+ EAQ L LL E+P +AW SF+ +D
Sbjct: 140 LPETEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
+HIS+G +VA N P Q++A+G+NC+ V+ ++QL + + PLVVYPNSGE
Sbjct: 200 EHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ ++W G L+GGCCRT +D
Sbjct: 268 SAPSGCTLHDKF-SEWQQAGARLIGGCCRTSPKD 300
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D +HIS+G +VA N P Q++A+G+NC+ V+P ++QL + + PLVVYPNS
Sbjct: 198 DAEHISDGTPLREVA-AYLNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|238893292|ref|YP_002918026.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262042370|ref|ZP_06015532.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|378977207|ref|YP_005225348.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033371|ref|YP_005953284.1| homocysteine methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|402782207|ref|YP_006637753.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419973404|ref|ZP_14488829.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419978587|ref|ZP_14493883.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983974|ref|ZP_14499123.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990025|ref|ZP_14504999.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419995904|ref|ZP_14510709.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000816|ref|ZP_14515474.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007558|ref|ZP_14522051.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013377|ref|ZP_14527688.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420018462|ref|ZP_14532659.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024552|ref|ZP_14538565.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030309|ref|ZP_14544136.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035413|ref|ZP_14549077.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420041747|ref|ZP_14555243.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047809|ref|ZP_14561125.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053510|ref|ZP_14566688.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420058351|ref|ZP_14571364.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064641|ref|ZP_14577450.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420072547|ref|ZP_14585184.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076197|ref|ZP_14588670.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081830|ref|ZP_14594134.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421915571|ref|ZP_16345169.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424829167|ref|ZP_18253895.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425080067|ref|ZP_18483164.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425090190|ref|ZP_18493275.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932689|ref|ZP_19006261.1| homocysteine methyltransferase [Klebsiella pneumoniae JHCK1]
gi|428938760|ref|ZP_19011882.1| homocysteine methyltransferase [Klebsiella pneumoniae VA360]
gi|449061607|ref|ZP_21739007.1| homocysteine methyltransferase [Klebsiella pneumoniae hvKP1]
gi|238545608|dbj|BAH61959.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040278|gb|EEW41387.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|339760499|gb|AEJ96719.1| homocysteine methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|364516618|gb|AEW59746.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397348876|gb|EJJ41974.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397351658|gb|EJJ44741.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397355025|gb|EJJ48051.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366888|gb|EJJ59503.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397368546|gb|EJJ61152.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397373031|gb|EJJ65503.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397380326|gb|EJJ72511.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384259|gb|EJJ76379.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397390419|gb|EJJ82329.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399167|gb|EJJ90824.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402130|gb|EJJ93742.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397408149|gb|EJJ99525.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397416649|gb|EJK07822.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397418284|gb|EJK09443.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397424295|gb|EJK15202.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397433347|gb|EJK23997.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397437392|gb|EJK27961.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397439066|gb|EJK29531.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447708|gb|EJK37898.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397452763|gb|EJK42829.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543069|gb|AFQ67218.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405606992|gb|EKB79962.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405613874|gb|EKB86595.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410122080|emb|CCM87794.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414706586|emb|CCN28290.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305081|gb|EKV67210.1| homocysteine methyltransferase [Klebsiella pneumoniae VA360]
gi|426306822|gb|EKV68916.1| homocysteine methyltransferase [Klebsiella pneumoniae JHCK1]
gi|448872874|gb|EMB08016.1| homocysteine methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 310
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 177/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A +HRPR++AL++AGAD+LA ET+P+ E Q L LL+E+P +AW SF+ +D
Sbjct: 141 RSAAEFQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQEYPRARAWYSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACASLADYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|152968883|ref|YP_001333992.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|419762034|ref|ZP_14288283.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|424934883|ref|ZP_18353255.1| Homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078177|ref|ZP_18481280.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088810|ref|ZP_18491903.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|150953732|gb|ABR75762.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|397744952|gb|EJK92161.1| homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|405591156|gb|EKB64669.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601902|gb|EKB75055.1| homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|407809070|gb|EKF80321.1| Homocysteine methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 310
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 177/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A +HRPR++AL++AGAD+LA ET+P+ E Q L LL+E+P +AW SF+ +D
Sbjct: 141 RSAAEFQAFHRPRVEALLDAGADLLACETLPSFAEIQALAALLQEYPRARAWYSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACASLADYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|153954877|ref|YP_001395642.1| homocysteine methyltransferase [Clostridium kluyveri DSM 555]
gi|219855331|ref|YP_002472453.1| hypothetical protein CKR_1988 [Clostridium kluyveri NBRC 12016]
gi|146347735|gb|EDK34271.1| Predicted homocysteine S-methyltransferase [Clostridium kluyveri
DSM 555]
gi|219569055|dbj|BAH07039.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 313
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 179/396 (45%), Gaps = 107/396 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DG +++L +I D LWS+ L + H D+ +GAD +T+SYQ
Sbjct: 12 KVIILDGALATELEKIGCNIDDS--LWSAKILYEDPKIIEGVHYDYFVSGADCAITSSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GFME D + +LI+ SV K+ ARD
Sbjct: 70 ATIRGFME-KGFKEDEAIELIRLSVQVAKK----------------ARDRF--------- 103
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
W + LIAGS+GPYGA L DGSEY G Y
Sbjct: 104 ------------------------WKNPLNRINRPKPLIAGSIGPYGAYLADGSEYIGHY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
++SE + E+HRPR++ L+E G DILA ETIP+ EAQ + +LL E+P +W+SFS
Sbjct: 140 --NISEEELMEFHRPRMKILIEEGVDILACETIPSLVEAQAILKLLEEFPSVCSWISFSA 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPN 301
KD+ +IS G S + A+ Y + Q+ A+GVNC P ++SLIEQ+ K + P++VYPN
Sbjct: 198 KDELNISEGTSLAKCAK--YLDSNRQVAAIGVNCTPPKYINSLIEQISKNSSKPIIVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE I + W + +FSC +
Sbjct: 256 SGEEYDGI---------------TKTWHGDSSSKAFSCSAK------------------- 281
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+W D G L+GGCCRT ED
Sbjct: 282 ----------------EWFDGGARLIGGCCRTTPED 301
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D+ +IS G S + A+ Y + Q+ A+GVNC P ++ LIEQ+ K + P++VYPNS
Sbjct: 199 DELNISEGTSLAKCAK--YLDSNRQVAAIGVNCTPPKYINSLIEQISKNSSKPIIVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEEYD 261
>gi|423387943|ref|ZP_17365194.1| hypothetical protein ICE_05684 [Bacillus cereus BAG1X1-2]
gi|401627287|gb|EJS45161.1| hypothetical protein ICE_05684 [Bacillus cereus BAG1X1-2]
Length = 325
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 187/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARKARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRPKP--LVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V V++ T+A++HR R+ AL+EAGAD+LA ETIP +EA++L LLRE+P AWLSFS
Sbjct: 143 V--VTDKTLADFHRSRMSALIEAGADLLAFETIPCLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQKLRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C+ +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCDTLDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQKLRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|300718011|ref|YP_003742814.1| homocysteine S-methyltransferase [Erwinia billingiae Eb661]
gi|299063847|emb|CAX60967.1| Homocysteine S-methyltransferase [Erwinia billingiae Eb661]
Length = 300
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 178/406 (43%), Gaps = 112/406 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
MA ++DG +++L D+ D LWS+ L + + Q H D+ AGA + +T S
Sbjct: 1 MAAGLVLDGAMATELEARGCDLTDA--LWSAKVLIENPELIYQVHYDYFNAGAQVAITAS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF + L + S LI SV+ A
Sbjct: 59 YQATPLGFAK-RGLSEEQSLTLIARSVELASRA--------------------------- 90
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R DY + A ++LIAGSVGPYGA L DGSEYRG
Sbjct: 91 -----------RADYKA--------------AEPQAGNLLIAGSVGPYGAYLADGSEYRG 125
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + +A M +HRPRIQALV AGADILA ET+P+ E Q L LL E+P AW SF
Sbjct: 126 DY--SLPQAEMMAFHRPRIQALVAAGADILACETMPSFAEIQALVALLAEFPGTPAWFSF 183
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +D +H+S+G +QV + Q +A+G+NC+ V++ ++ L + PLVVY
Sbjct: 184 TLRDGEHLSDGTPLSQVVSVLESC--PQAVALGLNCIALDKVTAALQTLSSLTKKPLVVY 241
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE +YDA+
Sbjct: 242 PNSGE--------------------------------------------------QYDAI 251
Query: 360 NARW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ W D C +D ++ W G L+GGCCRT D + R
Sbjct: 252 SKTWHSDASTCTLIDN-LSAWQSAGAKLIGGCCRTTPADIAAIAQR 296
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +QV + Q +A+G+NC+ V+ ++ L + PLVVYPNS
Sbjct: 187 DGEHLSDGTPLSQVVSVLESC--PQAVALGLNCIALDKVTAALQTLSSLTKKPLVVYPNS 244
Query: 569 GERYD 573
GE+YD
Sbjct: 245 GEQYD 249
>gi|397166506|ref|ZP_10489950.1| homocysteine S-methyltransferase [Enterobacter radicincitans DSM
16656]
gi|396091594|gb|EJI89160.1| homocysteine S-methyltransferase [Enterobacter radicincitans DSM
16656]
Length = 310
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 184/404 (45%), Gaps = 116/404 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + H D+ +AGA I +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADN--LWSAKVLMENPQIIRDVHLDYFRAGAQIAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L S LI+ SV KEA + R+++P + GP
Sbjct: 76 AGFAA-RGLTEAQSKALIEQSVKLAKEASEI------YRAENP--------NAGP----- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 116 ---------------------------------LLVAGSVGPYGAYLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPRI+AL+ AGAD+LA ET+P+ E + L LL E+P +AW SF+ +DD
Sbjct: 142 -SHEAFQVFHRPRIEALLNAGADLLACETLPSFAEIKALADLLSEYPDVQAWFSFTLRDD 200
Query: 246 KHISNGESFTQV--ARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
KH+S+G +V A + Y Q++A+G+NC+ ++ ++ L++ +PLVVYPNS
Sbjct: 201 KHLSDGTPLAEVVNALSAY----PQIVALGINCIALSKTTAALKHLQSLSALPLVVYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YDAV
Sbjct: 257 GE--------------------------------------------------TYDAVTKA 266
Query: 363 W-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM-KHR 404
W + D C + ++ WL+ G L+GGCCRT +D + +HR
Sbjct: 267 WHVHGDTCGSLAAHLPQWLEAGARLIGGCCRTTPQDISALSEHR 310
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQV--ARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYP 566
DDKH+S+G +V A + Y Q++A+G+NC+ + ++ L++ +PLVVYP
Sbjct: 199 DDKHLSDGTPLAEVVNALSAY----PQIVALGINCIALSKTTAALKHLQSLSALPLVVYP 254
Query: 567 NSGERYD 573
NSGE YD
Sbjct: 255 NSGETYD 261
>gi|423520411|ref|ZP_17496891.1| hypothetical protein IG7_05480 [Bacillus cereus HuA2-4]
gi|401154110|gb|EJQ61530.1| hypothetical protein IG7_05480 [Bacillus cereus HuA2-4]
Length = 325
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD MT SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|163943202|ref|YP_001642432.1| homocysteine methyltransferase [Bacillus weihenstephanensis KBAB4]
gi|163865399|gb|ABY46457.1| homocysteine S-methyltransferase [Bacillus weihenstephanensis
KBAB4]
Length = 325
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD MT SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAMTASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLETLLREFPATYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|423118862|ref|ZP_17106546.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5246]
gi|376400606|gb|EHT13218.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5246]
Length = 310
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 176/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SHEEFQAFHRPRVEALLDAGADLLACETMPGFAEIKALAELLSTYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ +E L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVISILANY--PQIVALGINCIALEETTAALEHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGYLPRWLAAGAKLIGGCCRTTPKD 302
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + +E L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVISILANY--PQIVALGINCIALEETTAALEHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|433678974|ref|ZP_20510768.1| homocysteine methyltransferase [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815910|emb|CCP41304.1| homocysteine methyltransferase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 317
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 182/401 (45%), Gaps = 109/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ G LWS+ L + Q H D+ +AGA +T SYQA+
Sbjct: 17 VLDGALATELEARGCNL--GDALWSAKVLLEQPQLIRQVHLDYFQAGAQCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S QLI S +ALEA A
Sbjct: 75 LGFAAR-GLDLAQSQQLIARSAQ-----LALEARDA------------------------ 104
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
YR + + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 105 -----YRAMHAD------------------AGALLVAGSVGPYGAYLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +A M ++HRPRI ALV AG D+LA ET+P++ E L LL+E+P AW SF+ +D
Sbjct: 140 LPQAQMLDFHRPRIAALVAAGVDLLACETLPSAAEIVALLALLQEFPQSTAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G + +V + +P Q++A+G+NC+ P + S+ ++ L T +PLVVYPNSGE
Sbjct: 200 MHLSDGTALREVV-ALLDGHP-QVVALGINCIAPELGSAALQHLATLTRLPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H Y +G+R+D
Sbjct: 258 H-------------------------------------------YDAAGKRWDGAGI--- 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D C +D+ V W G L+GGCCRT + RL
Sbjct: 272 --DACGLLDR-VDAWRAAGARLIGGCCRTTPRAIAQLAQRL 309
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G + +V + +P Q++A+G+NC+ P + S ++ L T +PLVVYPNS
Sbjct: 198 DAMHLSDGTALREVV-ALLDGHP-QVVALGINCIAPELGSAALQHLATLTRLPLVVYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GEHYD 260
>gi|365969181|ref|YP_004950742.1| Homocysteine S-methyltransferase [Enterobacter cloacae EcWSU1]
gi|365748094|gb|AEW72321.1| Homocysteine S-methyltransferase [Enterobacter cloacae EcWSU1]
Length = 310
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 177/399 (44%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L D + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIRDVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S ++HRPR++AL++AGAD+LA ET+P+ E + L LL E+P + W SF+ +D
Sbjct: 142 -SAEAFTDFHRPRVEALLDAGADLLACETLPSFAEIKALAALLAEYPRARGWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V Q++A+G+NC+ ++ ++ L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVISALERY--PQIVALGINCIALENTTAALKHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
+ CE + Y+ WL G L+GGCCRT D +K
Sbjct: 269 HHGEACETLAGYLPQWLAAGAKLIGGCCRTTPTDIAELK 307
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V Q++A+G+NC+ + ++ L + +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVISALERY--PQIVALGINCIALENTTAALKHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 503
+ CE + Y+ WL G L+GGCCRT D +K
Sbjct: 272 EACETLAGYLPQWLAAGAKLIGGCCRTTPTDIAELK 307
>gi|423525136|ref|ZP_17501609.1| hypothetical protein IGC_04519 [Bacillus cereus HuA4-10]
gi|423525358|ref|ZP_17501830.1| hypothetical protein IGC_04740 [Bacillus cereus HuA4-10]
gi|401167451|gb|EJQ74733.1| hypothetical protein IGC_04740 [Bacillus cereus HuA4-10]
gi|401168607|gb|EJQ75868.1| hypothetical protein IGC_04519 [Bacillus cereus HuA4-10]
Length = 325
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 187/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARMLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+ +
Sbjct: 259 SGE--------------------------------------------------TYNPESK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|229077032|ref|ZP_04209790.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-18]
gi|228706234|gb|EEL58513.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-18]
Length = 308
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 185/406 (45%), Gaps = 111/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQA+I
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF S ++E ALE + ARD
Sbjct: 60 SGF-----------------SARGIQEQEALELIKKTVLLARRARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 89 --------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY--G 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS K++
Sbjct: 127 VTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSLKNE 186
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
K IS G + AR +Q++A+G+NC ++V+ I+ L+ P++VYPNSGE
Sbjct: 187 KEISEGIKLVECARAF--EKSEQIVAIGINCAPVIVVTGAIQGLRANTKKPIIVYPNSGE 244
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+ W
Sbjct: 245 --------------------------------------------------TYNPETKTWH 254
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
D + C +D +W G L+GGCCRT H++ + W S
Sbjct: 255 DHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 297
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC ++V+ I+ L+ P++VYPNS
Sbjct: 185 NEKEISEGIKLVECARAF--EKSEQIVAIGINCAPVIVVTGAIQGLRANTKKPIIVYPNS 242
Query: 569 GERYD 573
GE Y+
Sbjct: 243 GETYN 247
>gi|378581028|ref|ZP_09829679.1| homocysteine S-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
gi|377816326|gb|EHT99430.1| homocysteine S-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
Length = 311
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 179/394 (45%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCDLTDA--LWSAKVLMENPELIYQVHYDYFAAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ S LI SV+ + A
Sbjct: 75 QGFAA-RGLNEQQSLALIAQSVELAQRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ AT TDD R +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RADYL-----ATQ-------TDD--RILLVAGSVGPYGAFLADGSEYRGDYT-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPRI AL+ AG D+LA ET+P+ EAQ L LLRE+P AW SF+ +D
Sbjct: 140 LPEAEMMAFHRPRIAALLAAGVDVLACETLPSFAEAQTLVNLLREFPDSCAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNSG 303
+H+S+G VA N P Q+IAVG+NC+ V+ ++QL+ TE PLVVYPNSG
Sbjct: 200 EHLSDGTPLRDVA-AYLNAQP-QVIAVGINCIALDSVTPALQQLQRLTEK-PLVVYPNSG 256
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E N K+W S SG
Sbjct: 257 EQYDT---------------------NSKSWHSAP-------------SG---------- 272
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ +W G L+GGCCRT D
Sbjct: 273 -----CTLHDKFA-EWQQAGARLIGGCCRTSPRD 300
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D +H+S+G VA N P Q+IAVG+NC+ V+P ++QL+ TE PLVVYPN
Sbjct: 198 DAEHLSDGTPLRDVA-AYLNAQP-QVIAVGINCIALDSVTPALQQLQRLTEK-PLVVYPN 254
Query: 568 SGERYD 573
SGE+YD
Sbjct: 255 SGEQYD 260
>gi|440730685|ref|ZP_20910759.1| homocysteine methyltransferase [Xanthomonas translucens DAR61454]
gi|440377707|gb|ELQ14349.1| homocysteine methyltransferase [Xanthomonas translucens DAR61454]
Length = 312
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 178/403 (44%), Gaps = 113/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ G LWS+ L + Q H D+ +AGA +T SYQA+
Sbjct: 12 VLDGALATELEARGCDL--GDALWSAKVLLEQPQLIRQVHLDYFEAGAQCAITASYQATP 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S QLI S +ALEA A
Sbjct: 70 LGFAAR-GLDLAQSQQLIARSAQ-----LALEARDA------------------------ 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
YR + + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 100 -----YRAMHAD------------------AGALLVAGSVGPYGAYLADGSEYRGDYA-- 134
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +A M ++HRPRI ALVEAG D+LA ET P++ E L LL+E+P AW SF+ +D
Sbjct: 135 LPQAQMLDFHRPRIAALVEAGVDLLACETQPSAAEIVALLALLQEFPQSTAWFSFTLRDA 194
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G +V + +P Q++A+GVNC+ P + S+ ++ L T +PLVVYPNSGE
Sbjct: 195 MHLSDGTPLREVVAR-LDGHP-QVVALGVNCIAPELGSAALQHLATLTRLPLVVYPNSGE 252
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA W
Sbjct: 253 H--------------------------------------------------YDAAVKHWD 262
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D C VD+ V W G L+GGCCRT + RL
Sbjct: 263 GAGADACGLVDR-VDAWRAAGARLIGGCCRTTPRAIAQLAQRL 304
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G +V + +P Q++A+GVNC+ P + S ++ L T +PLVVYPNS
Sbjct: 193 DAMHLSDGTPLREVVAR-LDGHP-QVVALGVNCIAPELGSAALQHLATLTRLPLVVYPNS 250
Query: 569 GERYD 573
GE YD
Sbjct: 251 GEHYD 255
>gi|423595907|ref|ZP_17571936.1| hypothetical protein IIG_04773 [Bacillus cereus VD048]
gi|401221121|gb|EJR27746.1| hypothetical protein IIG_04773 [Bacillus cereus VD048]
Length = 325
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 187/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+ +
Sbjct: 259 SGE--------------------------------------------------TYNPESK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|386016841|ref|YP_005935135.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis AJ13355]
gi|327394917|dbj|BAK12339.1| homocysteine S-methyltransferase MmuM [Pantoea ananatis AJ13355]
Length = 390
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 178/394 (45%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 96 ILDGALATELEARGCDLADA--LWSAKVLVENPELIYQVHYDYFAAGARCAITASYQATP 153
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ S LI SV+ K A
Sbjct: 154 QGFAA-RGLNETQSLALIAQSVELAKRA-------------------------------- 180
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ AT AE A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 181 ------RADYL-----ATQAE---------AKILLVAGSVGPYGAFLADGSEYRGDYA-- 218
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E M +HRPRI AL+ AG D+LA ET+P+ EAQ L LL E+P +AW SF+ +D
Sbjct: 219 LPENEMMAFHRPRINALLTAGVDVLACETLPSFAEAQALVALLGEFPDSRAWFSFTLRDA 278
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
+HIS+G +VA N P Q++A+G+NC+ V+ ++QL + + PLVVYPNSGE
Sbjct: 279 EHISDGTPLREVAAY-LNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNSGE 336
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YDA + W
Sbjct: 337 Q--------------------------------------------------YDASSKTWH 346
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ ++W G L+GGCCRT +D
Sbjct: 347 SAPSGCTLHDKF-SEWQQAGARLIGGCCRTSPKD 379
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D +HIS+G +VA N P Q++A+G+NC+ V+P ++QL + + PLVVYPNS
Sbjct: 277 DAEHISDGTPLREVAAY-LNAQP-QVVALGINCIALESVTPALQQLQRLTDKPLVVYPNS 334
Query: 569 GERYD 573
GE+YD
Sbjct: 335 GEQYD 339
>gi|206580103|ref|YP_002240178.1| homocysteine methyltransferase [Klebsiella pneumoniae 342]
gi|290510019|ref|ZP_06549389.1| homocysteine S-methyltransferase [Klebsiella sp. 1_1_55]
gi|206569161|gb|ACI10937.1| homocysteine S-methyltransferase [Klebsiella pneumoniae 342]
gi|289776735|gb|EFD84733.1| homocysteine S-methyltransferase [Klebsiella sp. 1_1_55]
Length = 310
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 178/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDDAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A ++HRPR++AL++AGAD+LA ET+P+ E Q L LL+++P +AW SF+ +D
Sbjct: 141 RSAAEFQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQDYPRARAWYSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACATLADYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|429085355|ref|ZP_19148331.1| Homocysteine S-methyltransferase [Cronobacter condimenti 1330]
gi|426545476|emb|CCJ74372.1| Homocysteine S-methyltransferase [Cronobacter condimenti 1330]
Length = 310
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 178/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIHAVHLDYFHAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI AR + +A
Sbjct: 76 AGFAA-RGLDEAQSRALI-------------------------ARSVALA---------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ R D+ L T A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 100 ---RQAREDF--------------LATQPDAGPLLVAGSVGPYGAYLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++A A++HRPR++AL+EAGAD+LA ET+P+ EA+ L LL E+P +AW SF+ +D
Sbjct: 141 RTQAEFADFHRPRMEALLEAGADVLACETLPSLAEARALVALLAEYPQARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPNSGE 304
+HIS+G V + Q++A+G+NCV ++ + L +PLVVYPNSGE
Sbjct: 201 EHISDGSPLADVVAALASST--QIVALGINCVALENTTAALSHLHALTPLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDAV+ W
Sbjct: 259 --------------------------------------------------QYDAVSKTWR 268
Query: 365 -DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
D C + Y+ DW G AL+GGCCRT D +K +
Sbjct: 269 HDGHACHTLAHYLDDWRAAGAALIGGCCRTTPADIAALKAK 309
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D +HIS+G V + Q++A+G+NCV + + L +PLVVYPNS
Sbjct: 199 DSEHISDGSPLADVVAALASST--QIVALGINCVALENTTAALSHLHALTPLPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 466 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
D C + Y+ DW G AL+GGCCRT D +K +
Sbjct: 270 DGHACHTLAHYLDDWRAAGAALIGGCCRTTPADIAALKAK 309
>gi|365138363|ref|ZP_09345050.1| homocysteine S-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363655175|gb|EHL94041.1| homocysteine S-methyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 310
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 178/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A +HRPR++AL++AGAD+LA ET+P+ E Q L LL+ +P +AW +F+ +D
Sbjct: 141 RSAAEFQAFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQAYPRARAWYAFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V T NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREV-MTALADNP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + Y+ WL G L+GGCCRT +D + +
Sbjct: 269 HHGEACASLADYLPQWLAAGAKLIGGCCRTTPKDIAELNAK 309
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V T NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREV-MTALADNP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|401678749|ref|ZP_10810705.1| homocysteine methyltransferase [Enterobacter sp. SST3]
gi|400213990|gb|EJO44920.1| homocysteine methyltransferase [Enterobacter sp. SST3]
Length = 310
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 180/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRTLIGRSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P+ E + L LL +P +AW SF+ +D
Sbjct: 142 -SAEAFTAFHRPRVEALLDAGADLLACETLPSFAEIKALAALLAGYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V + ++A+G+NC+ ++ ++ L++ ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVSVL--ADSPHIVALGINCIALENTTAALKHLQSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ CE + Y+ WLD G L+GGCCRT +D + +
Sbjct: 269 HHGEACETLAGYLPQWLDAGAKLIGGCCRTTPKDIAELNAK 309
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V + ++A+G+NC+ + ++ L++ ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVSVL--ADSPHIVALGINCIALENTTAALKHLQSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
+ CE + Y+ WLD G L+GGCCRT +D + +
Sbjct: 272 EACETLAGYLPQWLDAGAKLIGGCCRTTPKDIAELNAK 309
>gi|365163146|ref|ZP_09359264.1| hypothetical protein HMPREF1014_04727 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363616819|gb|EHL68244.1| hypothetical protein HMPREF1014_04727 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 325
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ ++GAD +T SYQ
Sbjct: 16 SIMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRSGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ W I + + +++A SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DF-----------WKENIQTNRPKPLVVA-SVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEKCNALDILSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|451855432|gb|EMD68724.1| hypothetical protein COCSADRAFT_276080 [Cochliobolus sativus
ND90Pr]
Length = 321
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 184/403 (45%), Gaps = 108/403 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++ L T +G I G LWS+ L + +TH D+ +AGA++ +T SYQAS+
Sbjct: 22 ILDGALATYLET-LGANISG-ALWSAEILIANPSLIKKTHLDYYRAGANVAITASYQASL 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L L + ++K SV+ +EA
Sbjct: 80 DGLVKHLGLSEQDAKNVVKKSVELAREA-------------------------------- 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y+ S D + +AGSVGPYGA L DGSEYRGDYV
Sbjct: 108 ------RSQYITESSA------------DVGDKLFVAGSVGPYGAFLADGSEYRGDYV-- 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
V + M ++HR RIQALVEAG DILA ETIP+ E + L LL E+P +AW SF+ +D
Sbjct: 148 VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALIDLLTSEFPSSEAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
HIS+G +++A ++ +Q++++G NCV + +++LK + +VVYPNS
Sbjct: 208 GNHISDGTPLSEMAALFKSV--EQVVSLGFNCVPDDVALVALQELKPLVKEGTMVVYPNS 265
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE A REW + +TE L
Sbjct: 266 GEQWNAKA---------------REWEGK--------RTEGSTLA--------------- 287
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
K +W D G L+GGCCRT +D MK L
Sbjct: 288 -----------KKTEEWRDAGAGLIGGCCRTTPDDIAVMKQAL 319
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D HIS+G +++A ++ +Q++++G NCV + +++LK + +VVYPN
Sbjct: 207 DGNHISDGTPLSEMAALFKSV--EQVVSLGFNCVPDDVALVALQELKPLVKEGTMVVYPN 264
Query: 568 SGERYD 573
SGE+++
Sbjct: 265 SGEQWN 270
>gi|288936924|ref|YP_003440983.1| homocysteine S-methyltransferase [Klebsiella variicola At-22]
gi|288891633|gb|ADC59951.1| homocysteine S-methyltransferase [Klebsiella variicola At-22]
Length = 310
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 178/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDDAQSRALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGS+GPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSIGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A ++HRPR++AL++AGAD+LA ET+P+ E Q L LL+++P +AW SF+ +D
Sbjct: 141 RSAAEFQDFHRPRVEALLDAGADLLACETLPSFAEIQALTALLQDYPRARAWYSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACATLADYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|363807204|ref|NP_001242352.1| uncharacterized protein LOC100811127 [Glycine max]
gi|255644435|gb|ACU22722.1| unknown [Glycine max]
Length = 341
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 187/390 (47%), Gaps = 95/390 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF+++L + D+ D LWS+ L ++ V + H D++ AGA+I++T SYQA+I
Sbjct: 24 VIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIILTASYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + +++ SV+ +EA R+I Y
Sbjct: 82 QGF-EAKGFSREEGETMLRRSVEIAREA----------------REIY-------YDRCT 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+D S++ D E +R R ILIA SVG YGA L DGSEY GDY +
Sbjct: 118 KDSSDFMRD-----------ERYR------KRPILIAASVGSYGAYLADGSEYVGDYGDA 160
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK-AWLSFSCKD 244
V+ T+ ++HR R++ LVEAGAD++A ETIP EAQ LL E + AW SFSCKD
Sbjct: 161 VTVQTLKDFHRERVKILVEAGADLIAFETIPNKLEAQAYAELLEEEGIETPAWFSFSCKD 220
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ ++ +G+S + A + Q++AVGVNC P + LI + K + P++VYPNSG
Sbjct: 221 ESNVVSGDSIFECASIADSCR--QVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNSG 278
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E +A W+ S E +D V+
Sbjct: 279 ETYIA---------------------ESNQWVKSSGAAE-------------HDFVS--- 301
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
Y+ W D G +L GGCCRT
Sbjct: 302 -----------YIGKWRDAGASLFGGCCRT 320
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D+ ++ +G+S + A + Q++AVGVNC P + LI + K + P++VYPNS
Sbjct: 220 DESNVVSGDSIFECASIADSCR--QVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNS 277
Query: 569 GERYDFHLADEKNNCVKS 586
GE Y E N VKS
Sbjct: 278 GETY----IAESNQWVKS 291
>gi|423566360|ref|ZP_17542634.1| hypothetical protein II5_05762 [Bacillus cereus MSX-A1]
gi|401191999|gb|EJQ99020.1| hypothetical protein II5_05762 [Bacillus cereus MSX-A1]
Length = 325
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEGHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ W I + + +++A SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DF-----------WKENIQTNRPKPLVVA-SVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P+++YPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIIYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEKCNALDIQSDEWYRAGARLIGGCCRT---TPYHIEEIANKWRS 314
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P+++YPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIIYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|407702888|ref|YP_006816036.1| homocysteine methyltransferase [Bacillus thuringiensis MC28]
gi|407387303|gb|AFU17797.1| homocysteine methyltransferase [Bacillus thuringiensis MC28]
Length = 325
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 183/409 (44%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD G+
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARDDFWKGNTQ--- 113
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 114 -----------------------------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGA++LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGANLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNSLDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|52078720|ref|YP_077511.1| homocysteine methyltransferase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|404487595|ref|YP_006711701.1| homocysteine methyltransferase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52001931|gb|AAU21873.1| Homocysteine S-methyltransferase YbgG [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52346592|gb|AAU39226.1| homocysteine S-methyltransferase YbgG [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 315
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 183/396 (46%), Gaps = 107/396 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG +++L Y D+ D LWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 13 SVIILDGAMATELERYGCDLNDS--LWSAKILIENPELIKQVHLDYFRAGADCAITASYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+++ GF + L + LI+ SV E ARD A
Sbjct: 71 STVEGFTK-RGLSEQEALHLIRESVRLAAE----------------ARDEFWA------- 106
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A +R P +A SVGPYGA L DGSEY+G+Y
Sbjct: 107 ----------------------APENREGRPKP----FVAASVGPYGAFLADGSEYQGNY 140
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V+E +A++HR R+ AL+EAGADILA ETIP EA+ + LL+E+P AW+SFS
Sbjct: 141 --GVTEDELADFHRRRMGALIEAGADILACETIPCLSEAKAIVHLLKEFPDTHAWISFSA 198
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
KD +HIS+G + A+ + DQ+ AVGVNC R VSSLI +K P++VYPN
Sbjct: 199 KDGRHISDGTKAGECAK--WLDQHDQVAAVGVNCTRLEHVSSLIGGIKKHTAKPIIVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE P K W +CK + GE +A
Sbjct: 257 SGEQYD---------------------PETKTWHGAACKA---------SFGE-----SA 281
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R W ++G L+GGCCRT ED
Sbjct: 282 R---------------SWYNQGAQLIGGCCRTTPED 302
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 492 CRTYAEDTLHMKHRLDD---W------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 542
C + A+ +H+ D W D +HIS+G + A+ + DQ+ AVGVNC
Sbjct: 173 CLSEAKAIVHLLKEFPDTHAWISFSAKDGRHISDGTKAGECAK--WLDQHDQVAAVGVNC 230
Query: 543 VRPLMVSPLIEQLKTENI-PLVVYPNSGERYD 573
R VS LI +K P++VYPNSGE+YD
Sbjct: 231 TRLEHVSSLIGGIKKHTAKPIIVYPNSGEQYD 262
>gi|229170211|ref|ZP_04297896.1| Homocysteine S-methyltransferase [Bacillus cereus AH621]
gi|228613269|gb|EEK70409.1| Homocysteine S-methyltransferase [Bacillus cereus AH621]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 185/406 (45%), Gaps = 111/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQA+I
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF S ++E ALE + ARD
Sbjct: 60 SGF-----------------SARGIQEQEALELIKKTVLLARRARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 89 --------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY--G 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS K++
Sbjct: 127 VTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSLKNE 186
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNSGE
Sbjct: 187 KEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNSGE 244
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+ + W
Sbjct: 245 --------------------------------------------------TYNPESKTWH 254
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ C +D +W G L+GGCCRT H++ + W S
Sbjct: 255 GHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 297
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 185 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 242
Query: 569 GERYD 573
GE Y+
Sbjct: 243 GETYN 247
>gi|397656224|ref|YP_006496926.1| Homocysteine S-methyltransferase [Klebsiella oxytoca E718]
gi|394344839|gb|AFN30960.1| Homocysteine S-methyltransferase [Klebsiella oxytoca E718]
Length = 310
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 177/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 143 REE--FQAFHRPRVEALLDAGADLLACETMPNFAEMKALSELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVVAVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + +Y+ WL G L+GGCCRT +D + R
Sbjct: 269 HHGEACATLAEYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVVAVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|452004476|gb|EMD96932.1| hypothetical protein COCHEDRAFT_1018643 [Cochliobolus
heterostrophus C5]
Length = 321
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 186/403 (46%), Gaps = 108/403 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++ L T +G I G LWS+ L + +TH D+ +AGA++ +T SYQAS+
Sbjct: 22 ILDGALATYLET-LGANISG-ALWSAEILIANPSLIRKTHVDYYRAGANVAITASYQASL 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L L + ++K SV+ +EA RS
Sbjct: 80 DGLVKHLGLSEQDAKSVVKKSVELAQEA----------RS-------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++++EA D + +AGSVGPYGA L DGSEYRGDYV
Sbjct: 110 -----------QYITEANA---------DVQDKLFVAGSVGPYGAFLADGSEYRGDYV-- 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
V + M ++HR RIQALVEAG DILA ETIP+ E + L LL E+P +AW SF+ +D
Sbjct: 148 VPKEKMKDFHRGRIQALVEAGVDILACETIPSKAETEALIDLLTSEFPSSEAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
HIS+G +++ + +Q++++G NCV + +++LK + +VVYPNS
Sbjct: 208 GSHISDGTPLSEIVALFKGV--EQVVSLGFNCVPDDVALVALQELKPLVKEGTMVVYPNS 265
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE A REW + +TE L
Sbjct: 266 GEQWNAKA---------------REWEGK--------RTEGSTLA--------------- 287
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
K +W D G L+GGCCRT ED MK L
Sbjct: 288 -----------KKTEEWRDAGAGLIGGCCRTTPEDIAVMKQAL 319
>gi|403058001|ref|YP_006646218.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805327|gb|AFR02965.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 315
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 177/401 (44%), Gaps = 117/401 (29%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF S LI SV +A DD RD AG+
Sbjct: 71 QATPQGFAA-RGYSETESLALIAKSVQLAAQA-----------RDDYRRDNPQAGT---- 114
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+L+AGSVGPYGA L DGSEYRGD
Sbjct: 115 -------------------------------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESF-TQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVV 298
+D +H+S+G T +AR +NP Q++AVG+NC+ V+ + L + +PLVV
Sbjct: 196 LRDSEHLSDGTPLRTVLAR----VNPCSQVVAVGINCIALENVTPALTHLSSLTELPLVV 251
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE +YDA
Sbjct: 252 YPNSGE--------------------------------------------------QYDA 261
Query: 359 VNARWIDR--DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
V W D+C + Y+ +W G L+GGCCRT D
Sbjct: 262 VTKTWSSAHDDICS-LTAYLPEWQAAGARLIGGCCRTTPAD 301
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESF-TQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYP 566
D +H+S+G T +AR +NP Q++AVG+NC+ V+P + L + +PLVVYP
Sbjct: 198 DSEHLSDGTPLRTVLAR----VNPCSQVVAVGINCIALENVTPALTHLSSLTELPLVVYP 253
Query: 567 NSGERYD 573
NSGE+YD
Sbjct: 254 NSGEQYD 260
>gi|386756822|ref|YP_006230038.1| homocysteine methyltransferase [Bacillus sp. JS]
gi|384930104|gb|AFI26782.1| homocysteine methyltransferase [Bacillus sp. JS]
Length = 315
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 184/410 (44%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L D + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA
Sbjct: 73 EGFAA-RGLSKAEARRLIELSVSIAAEA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA SVGPYGA L DGSEYRG+Y
Sbjct: 100 RD-------------EFWSFEENRLNRPKP----IIAASVGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC +SSLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCA--AWLDEHRQIAALGINCTPLQHISSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PGTKTWNGAAC-------------AESYGA-SARI- 282
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT ED + WV L T
Sbjct: 283 --------------WHEKGAKLIGGCCRTKPEDI----QEIAAWVRSLKT 314
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC +S LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCA--AWLDEHRQIAALGINCTPLQHISSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|424791226|ref|ZP_18217701.1| homocysteine S-methyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797664|gb|EKU25884.1| homocysteine S-methyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 317
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 178/403 (44%), Gaps = 113/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ G LWS+ L + Q H D+ +AGA +T SYQA+
Sbjct: 17 VLDGALATELEARGCDL--GDALWSAKVLLEQPQLIRQVHLDYFEAGAQCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF +D S QLI S +AL+A RD +A
Sbjct: 75 LGFAAR-GIDPAQSRQLIARSAQ-----LALQA-----------RDAYLA---------- 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
T A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 108 --------------------------THADAGALLVAGSVGPYGAYLSDGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A M ++HRPRI ALVEAG D+LA ET P++ E L LL+E+P AW SF+ +D
Sbjct: 140 LPHAAMLDFHRPRIAALVEAGVDLLACETQPSAAEIVALLALLQEFPQSTAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G +V + +P Q++A+GVNC+ P + S+ ++ L T +PLVVYPNSGE
Sbjct: 200 MHLSDGTPLREVVAR-LDGHP-QVVALGVNCIAPELGSAALQHLATLTRLPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA W
Sbjct: 258 H--------------------------------------------------YDAAVKHWD 267
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D C VD+ V W G L+GGCCRT D + RL
Sbjct: 268 GAGADACGLVDR-VDAWRAAGARLIGGCCRTTPRDIAQLAQRL 309
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G +V + +P Q++A+GVNC+ P + S ++ L T +PLVVYPNS
Sbjct: 198 DAMHLSDGTPLREVVAR-LDGHP-QVVALGVNCIAPELGSAALQHLATLTRLPLVVYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GEHYD 260
>gi|423369763|ref|ZP_17347193.1| hypothetical protein IC3_04862 [Bacillus cereus VD142]
gi|401076047|gb|EJP84407.1| hypothetical protein IC3_04862 [Bacillus cereus VD142]
Length = 325
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------STRGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPATYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K +S G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEVSEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K +S G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEVSEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|328716395|ref|XP_001946395.2| PREDICTED: homocysteine S-methyltransferase ybgG-like
[Acyrthosiphon pisum]
Length = 309
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 66/304 (21%)
Query: 6 LIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
L+DG F S ++ YV D + HPLW S+ L +DAV++ H+
Sbjct: 9 LLDGSFISGVTPYVDIDSVMKHPLWGSHLLLNNEDAVIRGHK------------------ 50
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
DY IK+ D++ Y AS
Sbjct: 51 ----------DY------IKAGADFLTTI--------------------------TYQAS 68
Query: 125 LRDGSEYRG-DY---VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
+R +Y DY E + + + + ++ R+I I GSVGPYGASLRD SEY G
Sbjct: 69 IRGFQKYLDLDYDQSYELIKRSVIICRQAITEENVERNIQIMGSVGPYGASLRDCSEYNG 128
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
+Y++ ++ + +WH+PRIQALVEAG D++ ETIP+ EA +L +L E+P+QKA LSF
Sbjct: 129 NYIDTMNLKELYDWHKPRIQALVEAGVDVMLFETIPSVIEATILLNILTEFPNQKACLSF 188
Query: 241 SCKDDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
SCKD H+S+GE+F+ + N QLIA+G+NC+ P ++ L+ +KT+N+ + Y
Sbjct: 189 SCKDGNHLSHGETFSSAVEMFWSNDYCKQLIAIGMNCLHPKFITPLLMSVKTKNVNFITY 248
Query: 300 PNSG 303
PN G
Sbjct: 249 PNGG 252
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 48/154 (31%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC---------------------- 339
+G ++ ETIP+ EA +L +L E+PNQKA LSFSC
Sbjct: 153 AGVDVMLFETIPSVIEATILLNILTEFPNQKACLSFSCKDGNHLSHGETFSSAVEMFWSN 212
Query: 340 --------------------------KTENIPLVVYPNSGERYDAVNARWIDRDLCEPVD 373
KT+N+ + YPN G +D + D + +
Sbjct: 213 DYCKQLIAIGMNCLHPKFITPLLMSVKTKNVNFITYPNGGGIWDITKNCYDDTQIYKVSI 272
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
+ W +G+ + GGCC+T A + ++ +DD
Sbjct: 273 DDLNIWNKKGLKIFGGCCKTDAIEIARLRSLIDD 306
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 510 DDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
D H+S+GE+F+ + N QLIA+G+NC+ P ++PL+ +KT+N+ + YPN
Sbjct: 192 DGNHLSHGETFSSAVEMFWSNDYCKQLIAIGMNCLHPKFITPLLMSVKTKNVNFITYPNG 251
Query: 569 GERYDF 574
G +D
Sbjct: 252 GGIWDI 257
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 408 WVSGLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFL 455
++SG++ YV D + HPLW S+ L +DAV++ H+D+IK DFL
Sbjct: 14 FISGVTPYVDIDSVMKHPLWGSHLLLNNEDAVIRGHKDYIKAGA--DFL 60
>gi|229065347|ref|ZP_04200624.1| Homocysteine S-methyltransferase [Bacillus cereus AH603]
gi|228715915|gb|EEL67655.1| Homocysteine S-methyltransferase [Bacillus cereus AH603]
Length = 308
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 111/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQA+I
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF S ++E ALE + ARD
Sbjct: 60 SGF-----------------SARGIQEQEALELIKKTVLLARRARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 89 --------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY--G 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS K++
Sbjct: 127 VTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSLKNE 186
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
K IS G + AR +Q++A+G+NC +V+ I++L+ P+++YPNSGE
Sbjct: 187 KEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIIYPNSGE 244
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+ W
Sbjct: 245 --------------------------------------------------TYNPETKTWH 254
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ C +D +W G L+GGCCRT H++ + W S
Sbjct: 255 GHEQCNTLDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 297
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P+++YPNS
Sbjct: 185 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIIYPNS 242
Query: 569 GERYD 573
GE Y+
Sbjct: 243 GETYN 247
>gi|75760225|ref|ZP_00740280.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74492278|gb|EAO55439.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 325
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------STRGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C ++ +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALNIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|354722220|ref|ZP_09036435.1| homocysteine methyltransferase [Enterobacter mori LMG 25706]
Length = 310
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 178/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L D + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLVENPDLIREVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF A L+ +R LI SV
Sbjct: 76 AGF-----------------------SARGLDEAQSRA---------LIGKSV------- 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 97 --------ELARKAREAYLAE------NPHAGTLLVAGSVGPYGAYLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +H PR++AL++AGAD+LA ET+P+ +E + L LL E+P +AW SF+ +D
Sbjct: 143 AQEFTT--FHHPRVEALLDAGADLLACETLPSFEEIKALAALLSEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N ++A+G+NC+ ++ ++ L++ +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVSVL--ANSPHIVALGINCIALENTTAALKHLQSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + ++ WL G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGFLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N ++A+G+NC+ + ++ L++ +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLREVVSVL--ANSPHIVALGINCIALENTTAALKHLQSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|402844823|ref|ZP_10893172.1| homocysteine S-methyltransferase [Klebsiella sp. OBRC7]
gi|402272998|gb|EJU22208.1| homocysteine S-methyltransferase [Klebsiella sp. OBRC7]
Length = 310
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 178/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKTLIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY+
Sbjct: 103 --------------REAYLAE------NPLAGALLVAGSVGPYGAFLADGSEYRGDYLR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S+ +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SDEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKSWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + +Y+ WL G L+GGCCRT +D + R
Sbjct: 269 HHGEACATLAEYLPQWLAAGAKLIGGCCRTTPQDIAELNAR 309
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|375259245|ref|YP_005018415.1| homocysteine methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|365908723|gb|AEX04176.1| homocysteine methyltransferase [Klebsiella oxytoca KCTC 1686]
Length = 310
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 176/401 (43%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAFLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 143 REE--FQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVIGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + Y+ WL G L+GGCCRT +D + R
Sbjct: 269 HHGEACATLAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVIGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|375360910|ref|YP_005128949.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451348385|ref|YP_007447016.1| homocysteine methyltransferase [Bacillus amyloliquefaciens IT-45]
gi|371566904|emb|CCF03754.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449852143|gb|AGF29135.1| homocysteine methyltransferase [Bacillus amyloliquefaciens IT-45]
Length = 315
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 183/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + + +LI++SV+ +A
Sbjct: 71 TIEGFAAH-GIPETEAIRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP+ EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPSLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEYIPPLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG--SQT 451
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKALIESG 161
Query: 452 NDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDD 511
D L P+L K +T L+E TYA + K D
Sbjct: 162 ADLLACETIPSL--------SEAKAITRLLEEFPG-------TYAWISFSAK------DG 200
Query: 512 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGE 570
+HIS G ++ A + + Q+ A+G+NC + PLIE++K + P++ YPNSGE
Sbjct: 201 RHISEGTPISECAALLDSCS--QIAAIGINCTPIEYIPPLIEEIKRAASKPIIAYPNSGE 258
Query: 571 RYD 573
+YD
Sbjct: 259 QYD 261
>gi|423393716|ref|ZP_17370941.1| hypothetical protein ICG_05563 [Bacillus cereus BAG1X1-3]
gi|401628860|gb|EJS46690.1| hypothetical protein ICG_05563 [Bacillus cereus BAG1X1-3]
Length = 325
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPATYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C ++ +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALEIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|255638530|gb|ACU19573.1| unknown [Glycine max]
Length = 341
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 187/390 (47%), Gaps = 95/390 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF+++L + D+ D LWS+ L ++ V + H D++ AGA+I++T SYQA+I
Sbjct: 24 VIDGGFATELERHGADLND--ELWSAKCLISSPHLVRRVHLDYLDAGANIILTASYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + +++ SV+ +EA R+I Y
Sbjct: 82 QGF-EAKGFSREEGETMLRRSVEIAREA----------------REIY-------YDRCT 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+D S++ D E +R R ILIA SVG YGA L DGSEY GDY +
Sbjct: 118 KDSSDFMRD-----------ERYR------KRPILIAASVGSYGAYLADGSEYVGDYGDA 160
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK-AWLSFSCKD 244
V+ T+ ++HR R++ LVEAGAD++A ETIP EA+ LL E + AW SFSCKD
Sbjct: 161 VTVQTLKDFHRERVKILVEAGADLIAFETIPNKLEARAYAELLEEEGIETPAWFSFSCKD 220
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ ++ +G+S + A + Q++AVGVNC P + LI + K + P++VYPNSG
Sbjct: 221 ESNVVSGDSIFECASIADSCR--QVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNSG 278
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E +A W+ S E +D V+
Sbjct: 279 ETYIA---------------------ESNQWVKSSGAAE-------------HDFVS--- 301
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
Y+ W D G +L GGCCRT
Sbjct: 302 -----------YIGKWRDAGASLFGGCCRT 320
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D+ ++ +G+S + A + Q++AVGVNC P + LI + K + P++VYPNS
Sbjct: 220 DESNVVSGDSIFECASIADSCR--QVVAVGVNCTAPRFIHGLISFIKKATSKPVLVYPNS 277
Query: 569 GERYDFHLADEKNNCVKS 586
GE Y E N VKS
Sbjct: 278 GETY----IAESNQWVKS 291
>gi|423438994|ref|ZP_17415953.1| hypothetical protein IE9_05153 [Bacillus cereus BAG4X12-1]
gi|423439191|ref|ZP_17416137.1| hypothetical protein IE9_05337 [Bacillus cereus BAG4X12-1]
gi|401114424|gb|EJQ22285.1| hypothetical protein IE9_05337 [Bacillus cereus BAG4X12-1]
gi|401115008|gb|EJQ22865.1| hypothetical protein IE9_05153 [Bacillus cereus BAG4X12-1]
Length = 325
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 186/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLDNPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARRARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRPKP--LVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVAVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C ++ +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALNIQCEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEISEGMKLVECARAF--EKSEQIVAIGINCAPVAVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|423510471|ref|ZP_17487002.1| hypothetical protein IG3_01968 [Bacillus cereus HuA2-1]
gi|423514854|ref|ZP_17491359.1| hypothetical protein IG3_06325 [Bacillus cereus HuA2-1]
gi|402441366|gb|EJV73322.1| hypothetical protein IG3_06325 [Bacillus cereus HuA2-1]
gi|402453978|gb|EJV85775.1| hypothetical protein IG3_01968 [Bacillus cereus HuA2-1]
Length = 325
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 185/409 (45%), Gaps = 111/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQ
Sbjct: 16 SIMLLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQ 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I GF S ++E ALE + ARD
Sbjct: 74 ATISGF-----------------SARGIQEQEALELIKKTVLLARKARD----------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 106 -----------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY 142
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS
Sbjct: 143 --GVTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPATYAWLSFSL 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++K + G + AR +Q++A+G+NC +V+ I++L+ P++VYPN
Sbjct: 201 KNEKEVGEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+
Sbjct: 259 SGE--------------------------------------------------TYNPETK 268
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
W + C +D +W G L+GGCCRT H++ + W S
Sbjct: 269 TWHGHEQCNALDIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 314
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K + G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 202 NEKEVGEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 259
Query: 569 GERYD 573
GE Y+
Sbjct: 260 GETYN 264
>gi|228900939|ref|ZP_04065153.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 4222]
gi|228858713|gb|EEN03159.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 4222]
Length = 308
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 111/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQA+I
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF S ++E ALE + ARD
Sbjct: 60 SGF-----------------STRGIQEQEALELIKKTVLLARRARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 89 --------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY--G 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS K++
Sbjct: 127 VTDKTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSLKNE 186
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNSGE
Sbjct: 187 KEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNSGE 244
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+ W
Sbjct: 245 --------------------------------------------------TYNPETKTWH 254
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ C ++ +W G L+GGCCRT H++ + W S
Sbjct: 255 GHEQCNALNIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 297
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
++K IS G + AR +Q++A+G+NC +V+ I++L+ P++VYPNS
Sbjct: 185 NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQELRANTKKPIIVYPNS 242
Query: 569 GERYD 573
GE Y+
Sbjct: 243 GETYN 247
>gi|385263366|ref|ZP_10041453.1| homocysteine methyltransferase [Bacillus sp. 5B6]
gi|385147862|gb|EIF11799.1| homocysteine methyltransferase [Bacillus sp. 5B6]
Length = 315
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 184/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF L+ D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGILETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + L++++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPQLVQEIKRATSKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + L++++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPQLVQEIKRATSKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|444352981|ref|YP_007389125.1| Homocysteine S-methyltransferase (EC 2.1.1.10) [Enterobacter
aerogenes EA1509E]
gi|443903811|emb|CCG31585.1| Homocysteine S-methyltransferase (EC 2.1.1.10) [Enterobacter
aerogenes EA1509E]
Length = 310
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 180/394 (45%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY +
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY-QR 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+EA A +HRPR++AL++AGAD+LA ET+P+ E L LLR++P +AW S + +D
Sbjct: 142 SAEAFQA-FHRPRVEALLDAGADLLACETLPSFAEITALAALLRDYPRARAWFSLTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++A+G+NC+ ++ ++ L + ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVAVLAD-NP-QVLALGINCIALENTTAALQHLHSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDA+ W
Sbjct: 259 H--------------------------------------------------YDALTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACATLAAYLPQWLAAGARLIGGCCRTTPQD 302
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++A+G+NC+ + ++ L + ++PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVVAVLAD-NP-QVLALGINCIALENTTAALQHLHSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|394992981|ref|ZP_10385747.1| homocysteine methyltransferase [Bacillus sp. 916]
gi|393806187|gb|EJD67540.1| homocysteine methyltransferase [Bacillus sp. 916]
Length = 315
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 183/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P LIA S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LIAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--IAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|384157835|ref|YP_005539908.1| homocysteine methyltransferase [Bacillus amyloliquefaciens TA208]
gi|384166852|ref|YP_005548230.1| homocysteine methyltransferase [Bacillus amyloliquefaciens XH7]
gi|328551923|gb|AEB22415.1| homocysteine methyltransferase [Bacillus amyloliquefaciens TA208]
gi|341826131|gb|AEK87382.1| homocysteine methyltransferase [Bacillus amyloliquefaciens XH7]
Length = 315
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 184/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAVQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +R+ P LIA S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRIHRPKP----LIAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + +LL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITKLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
WI K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WIGTACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ +H L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRIHRPKPL--IAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITKLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|311070893|ref|YP_003975816.1| homocysteine methyltransferase [Bacillus atrophaeus 1942]
gi|419822759|ref|ZP_14346330.1| homocysteine methyltransferase [Bacillus atrophaeus C89]
gi|310871410|gb|ADP34885.1| homocysteine methyltransferase [Bacillus atrophaeus 1942]
gi|388473127|gb|EIM09879.1| homocysteine methyltransferase [Bacillus atrophaeus C89]
Length = 310
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 176/393 (44%), Gaps = 108/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++I
Sbjct: 15 ILDGAMATELERKGCDLNDS--LWSAKILMEQPNLIKQVHTDYFAAGADCAITASYQSTI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + +LI+ SV EA RD
Sbjct: 73 EGFAA-RGVSRAEALRLIQKSVHIAAEA----------------RDEF------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W + + D + I +A SVGPYGA L DGSEYRGDY
Sbjct: 104 ---------------------WEQHKSSDRPKPI-VAASVGPYGAFLADGSEYRGDY--Q 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E + ++H PR++AL+EAGADILA ETIP EA+ + RLL+++P AW+SFS KD+
Sbjct: 140 MTEEELMDFHMPRMKALIEAGADILACETIPCLSEAKAIVRLLQKFPGTYAWISFSAKDE 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
KHIS+G + A+ + Q+ A G+NC + SLI++ K P++VYPNSGE
Sbjct: 200 KHISDGTPVAECAK--WLDQHGQVAAAGINCTPIQYIPSLIKECKKNTAKPIIVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P+ K W +C
Sbjct: 258 QYD---------------------PDTKTWNGAACA------------------------ 272
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
EP +K +W G L+GGCCRT ED
Sbjct: 273 -----EPYEKSAQNWRKCGAQLIGGCCRTTPED 300
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D+KHIS+G + A+ + Q+ A G+NC + LI++ K P++VYPNS
Sbjct: 198 DEKHISDGTPVAECAK--WLDQHGQVAAAGINCTPIQYIPSLIKECKKNTAKPIIVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|423101510|ref|ZP_17089212.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5242]
gi|376391298|gb|EHT03977.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5242]
Length = 310
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 177/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKTLIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY+
Sbjct: 103 --------------REAYLAE------NPLAGALLVAGSVGPYGAFLADGSEYRGDYLR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S+ +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ D
Sbjct: 142 -SDEEFQAFHRPRVEALLDAGADLLACETMPNFAEMKALAELLTAYPRARAWFSFTLHDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKSWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + +Y+ WL G L+GGCCRT +D + R
Sbjct: 269 HHGEACATLAEYLPQWLAAGAKLIGGCCRTTPQDIAELNAR 309
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVVGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|377577516|ref|ZP_09806498.1| homocysteine S-methyltransferase [Escherichia hermannii NBRC
105704]
gi|377541254|dbj|GAB51663.1| homocysteine S-methyltransferase [Escherichia hermannii NBRC
105704]
Length = 311
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 173/401 (43%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L ++V Q H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCDLND--TLWSAKVLLENPESVYQVHLDYFRAGAQCAVTASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF ++ + LIK SV+ + A
Sbjct: 76 AGFAA-RGMNEAQATALIKQSVELAQRA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ ++ +LIAGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RTDFLAERPDSGA--------------LLIAGSVGPYGAYLADGSEYRGDYT-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S+A ++HRPR+ ALVEAG D+LA ET+P+ E + L LL E P AW SF+ D
Sbjct: 141 LSQAAYCDFHRPRMAALVEAGVDLLACETLPSFAETRALVALLAECPDTTAWFSFTLHDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
H+S+G V DQ++A+GVNC+ P ++ ++ L +PLVVYPNSGE
Sbjct: 201 HHLSDGTPLEDVVALLDGH--DQVLAIGVNCIAPEQATAALQTLHGMTTLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YDA W
Sbjct: 259 --------------------------------------------------TYDAQTKCWT 268
Query: 365 -DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
C+ +D Y+ DWL G L+GGCCRT D + R
Sbjct: 269 AGGQTCDSLDGYLDDWLCAGARLIGGCCRTTPADIALLAQR 309
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 485 VALVGGCCRTYA--EDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 542
VAL+ C T A TLH D H+S+G V DQ++A+GVNC
Sbjct: 180 VALLAECPDTTAWFSFTLH--------DSHHLSDGTPLEDVVALLDGH--DQVLAIGVNC 229
Query: 543 VRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+ P + ++ L +PLVVYPNSGE YD
Sbjct: 230 IAPEQATAALQTLHGMTTLPLVVYPNSGETYD 261
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 470 CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
C+ +D Y+ DWL G L+GGCCRT D + R
Sbjct: 274 CDSLDGYLDDWLCAGARLIGGCCRTTPADIALLAQR 309
>gi|226312609|ref|YP_002772503.1| homocysteine methyltransferase [Brevibacillus brevis NBRC 100599]
gi|226095557|dbj|BAH43999.1| homocysteine S-methyltransferase [Brevibacillus brevis NBRC 100599]
Length = 311
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 182/393 (46%), Gaps = 107/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + ++ D LWS+ L + + + H ++ AGAD +T SYQAS+
Sbjct: 15 ILDGAMATELERHGCNLNDS--LWSAKVLMENPELIKRVHTEYFLAGADCAITASYQASV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + LI++SV IA++A RD S G
Sbjct: 73 EGFVR-LGMSQRDALLLIQASVQ-----IAVQA-----------RDEFWKNSDG------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RL P ++A SVGPYGA L DGSEYRG Y
Sbjct: 110 -----------------------RLDRPKP----IVAASVGPYGAYLADGSEYRGAY--E 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + ++HRPR++AL++AGADILA ETIP EA+ L RLL E+P AW+SFS KD+
Sbjct: 141 LSEEELIDFHRPRMKALIDAGADILACETIPCLSEARALVRLLEEFPGVYAWISFSAKDE 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
HIS+G S T+ A + +Q+ A+G+NC P + L++++++ + P+VVYPN+GE
Sbjct: 201 LHISDGTSITECA--IWLDKKEQIAALGINCTSPRNIPRLVQEIRSCTMKPIVVYPNAGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
RYD W
Sbjct: 259 --------------------------------------------------RYDPTTKTWY 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E +W + G L+GGCCRT ED
Sbjct: 269 GASSREGYGNNALEWYESGARLIGGCCRTKPED 301
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D+ HIS+G S T+ A + +Q+ A+G+NC P + L++++++ + P+VVYPN+
Sbjct: 199 DELHISDGTSITECA--IWLDKKEQIAALGINCTSPRNIPRLVQEIRSCTMKPIVVYPNA 256
Query: 569 GERYD 573
GERYD
Sbjct: 257 GERYD 261
>gi|452854286|ref|YP_007495969.1| homocysteine methylase using (R,S)AdoMet [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452078546|emb|CCP20296.1| homocysteine methylase using (R,S)AdoMet [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 315
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 184/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLGEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTTIEHIPPLIEEIKRSASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLGEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTTIEHIPPLIEEIKRSASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|154684747|ref|YP_001419908.1| homocysteine methyltransferase [Bacillus amyloliquefaciens FZB42]
gi|154350598|gb|ABS72677.1| YbgG [Bacillus amyloliquefaciens FZB42]
Length = 315
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 183/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENNFGKSAQGWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRAASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|429503756|ref|YP_007184940.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485346|gb|AFZ89270.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 315
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 184/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRSASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQGWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRSASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|419960235|ref|ZP_14476278.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
GS1]
gi|388604824|gb|EIM34051.1| homocysteine methyltransferase [Enterobacter cloacae subsp. cloacae
GS1]
Length = 310
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 177/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA + +T SYQA+
Sbjct: 18 VLDGAMATELEARGCNLADS--LWSAKVLMENPELIRDVHLDYYRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF A L+ + +R LI SV
Sbjct: 76 AGFA-----------------------ARGLDESQSRA---------LIGKSV------- 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ EA +AE + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 97 --------ELARKAREAYLAE------NANAGTLLVAGSVGPYGAYLADGSEYRGDYVRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E T +HRPR++AL++AGAD+LA ET+P+ E + L LL +P +AW SF+ +D
Sbjct: 143 AEEFTA--FHRPRVEALLDAGADLLACETLPSFTEIKALAALLTAFPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V N Q++A+G+NC+ +S + L + ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVSALENY--PQVVALGINCIALENTTSALTHLHSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ CE + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACETLAGYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V N Q++A+G+NC+ + + L + ++PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVSALENY--PQVVALGINCIALENTTSALTHLHSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|194017506|ref|ZP_03056117.1| homocysteine S-methyltransferase 2 (S-methylmethionine:homocysteine
methyltransferase 2) (SMM:Hcy S-methyltransferase 2)
(ZmHMT-2) [Bacillus pumilus ATCC 7061]
gi|194010778|gb|EDW20349.1| homocysteine S-methyltransferase 2 (S-methylmethionine:homocysteine
methyltransferase 2) (SMM:Hcy S-methyltransferase 2)
(ZmHMT-2) [Bacillus pumilus ATCC 7061]
Length = 312
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 178/396 (44%), Gaps = 112/396 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ KAGAD T SYQ +I
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFKAGADCATTASYQTTI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + +L+K SV KEA L D+ R G P+
Sbjct: 73 DGFAE-KGYSKEEAIELMKRSVTLAKEARDL------FWQDEARRK----GRTKPF---- 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+AGSVGP+GA L DGSEY+G+Y
Sbjct: 118 -----------------------------------VAGSVGPFGAYLSDGSEYKGNY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
++E T+ ++HRPRIQALVEAGADILA ETIP EA + +LL+ E+ AW++FS KD
Sbjct: 141 LTEQTLIDFHRPRIQALVEAGADILACETIPCLIEATAIAKLLQDEFNGVSAWITFSAKD 200
Query: 245 DKHISNGESFTQVARTCYN-MNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
D HIS G+ + R C + P +Q+ AVGVNC P +SSLI+++K + P+VVYPN
Sbjct: 201 DLHISEGD----LLRECVQALEPYEQIAAVGVNCTPPQFISSLIQEMKKGTSKPIVVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD
Sbjct: 257 SGE--------------------------------------------------LYDPEEK 266
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W L + W +G ++GGCCRT ED
Sbjct: 267 VWSGDTLQHTFGECAHQWYQDGAHIIGGCCRTTPED 302
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYN-MNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYP 566
DD HIS G+ + R C + P +Q+ AVGVNC P +S LI+++K + P+VVYP
Sbjct: 200 DDLHISEGD----LLRECVQALEPYEQIAAVGVNCTPPQFISSLIQEMKKGTSKPIVVYP 255
Query: 567 NSGERYD 573
NSGE YD
Sbjct: 256 NSGELYD 262
>gi|308172111|ref|YP_003918816.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|384162630|ref|YP_005544009.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|307604975|emb|CBI41346.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|328910185|gb|AEB61781.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens LL3]
Length = 316
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 190/412 (46%), Gaps = 110/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLNDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAVQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +R+ P LIA S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRIHRPKP----LIAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + +LL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITKLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + +LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPTLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE P K W+ +C+ N G+
Sbjct: 257 GEQYD---------------------PVTKTWIGAACEN---------NFGKSAQ----- 281
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
+ W ++GV+L+GGCCRT D + DW L T
Sbjct: 282 --------------SSWYEKGVSLIGGCCRTKPADI----QAIADWAKTLKT 315
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ +H L + + Y + DG Y L +D ++ HR +K
Sbjct: 106 HEENRIHRPKPL--IAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITKLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPTLIEEIKRAASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|157371708|ref|YP_001479697.1| homocysteine methyltransferase [Serratia proteamaculans 568]
gi|157323472|gb|ABV42569.1| homocysteine S-methyltransferase [Serratia proteamaculans 568]
Length = 312
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 175/404 (43%), Gaps = 117/404 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 18 ILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ LD S LI SV ++A
Sbjct: 76 QGFLRR-GLDQAQSLALIAKSVQLAQQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ +A +LIAGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RRDYLAQHPQAA--------------PLLIAGSVGPYGAYLADGSEYRGDY--S 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ + M +HRPRI AL EAG D+LA ET+P+ E Q L LL E+P AW +F+ +D
Sbjct: 141 LPQEEMIAFHRPRISALAEAGVDLLACETLPSFSELQALLTLLEEFPTLGAWFAFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G T+V + NP Q++A+G+NC+ V+ ++Q + PL+VYPNSGE
Sbjct: 201 QHLSDGTPLTEV-MAALHANP-QVLAIGINCIALENVAPALQQFAALADKPLLVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTW- 267
Query: 365 DRDLCEPVDKYVTDWLDE----GVALVGGCCRTYAEDTLHMKHR 404
C + D + E G L+GGCCRT +D + R
Sbjct: 268 --HACGGAHGSLIDQIGEWQRIGARLIGGCCRTTPQDIHQIATR 309
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G T+V + NP Q++A+G+NC+ V+P ++Q + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTEV-MAALHANP-QVLAIGINCIALENVAPALQQFAALADKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|398307727|ref|ZP_10511313.1| homocysteine methyltransferase [Bacillus vallismortis DV1-F-3]
Length = 315
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 175/410 (42%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA RD A
Sbjct: 73 EGFAA-RGLSEAEARRLIEMSVSIAAEA----------------RDEFWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E +RL P +IA SVGPYGA L DGSEYRG Y
Sbjct: 106 -------------------FEENRLNRPKP----IIAASVGPYGAYLADGSEYRGHY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELVEFHRPRMKALIEAGADVLACETIPCLSEAKAIARLLKEFPEAYAWISFSAKDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+HIS+G A + Q+ A G+NC + LIE+LK + P++VYPNSGE
Sbjct: 201 QHISDGTPAADCAS--WLDEHRQIAAFGINCTPLQHIPFLIEELKKHSSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD W
Sbjct: 259 --------------------------------------------------QYDPKTKTWN 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
EP W ++G L+GGCCRT ED + W L T
Sbjct: 269 GAGCAEPYGTSARTWHEKGAKLIGGCCRTTPEDI----KEIASWARSLKT 314
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +HIS+G A + Q+ A G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DSQHISDGTPAADCAS--WLDEHRQIAAFGINCTPLQHIPFLIEELKKHSSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|423127659|ref|ZP_17115338.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376394698|gb|EHT07348.1| homocysteine S-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 310
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 177/400 (44%), Gaps = 109/400 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEGRGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY+
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAYLADGSEYRGDYLR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SHEEFQAFHRPRVEALLDAGADLLACETLPNFAEIKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVIGVLANY--PQVVALGINCIALESTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H P K W + GE
Sbjct: 259 HY---------------------DPESKTW---------------HHHGEA--------- 273
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
CE + Y+ WL G L+GGCCRT +D + R
Sbjct: 274 ----CETLAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVIGVLANY--PQVVALGINCIALESTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
+ CE + Y+ WL G L+GGCCRT +D + R
Sbjct: 272 EACETLAGYLPQWLAAGAKLIGGCCRTTPKDIAELNAR 309
>gi|336248939|ref|YP_004592649.1| homocysteine methyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334734995|gb|AEG97370.1| homocysteine methyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 310
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 176/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P+ E L LLR++P +AW S + +D
Sbjct: 141 RSAEVFQAFHRPRVEALLDAGADLLACETLPSFAEITALAALLRDYPRARAWFSLTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V + NP Q++A+G+NC+ ++ ++ L + ++PLVVYPNSGE
Sbjct: 201 EHLSDGTPLREVVAVLAD-NP-QVLALGINCIALENTTAALQHLHSLTSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDA+ W
Sbjct: 259 H--------------------------------------------------YDALTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACATLAAYLPQWLAAGARLIGGCCRTTPQD 302
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++A+G+NC+ + ++ L + ++PLVVYPNS
Sbjct: 199 DAEHLSDGTPLREVVAVLAD-NP-QVLALGINCIALENTTAALQHLHSLTSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|429107580|ref|ZP_19169449.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 681]
gi|426294303|emb|CCJ95562.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 681]
Length = 310
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 177/399 (44%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EAQ L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEAQALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
HIS+G VA + P Q+ A+G+NCV ++ + +L +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIAALGINCVALEKTTAALGRLHDATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W R+D
Sbjct: 258 EQYDAVS---------------------KTW--------------------RHDG----- 271
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
C+ + Y+ +W G AL+GGCCRT D ++
Sbjct: 272 ---HACQTLAHYLNEWRAAGAALIGGCCRTTPADIAALR 307
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPN 567
D HIS+G VA + P Q+ A+G+NCV + + +L +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIAALGINCVALEKTTAALGRLHDATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|296272992|ref|YP_003655623.1| homocysteine S-methyltransferase [Arcobacter nitrofigilis DSM 7299]
gi|296097166|gb|ADG93116.1| homocysteine S-methyltransferase [Arcobacter nitrofigilis DSM 7299]
Length = 310
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 183/408 (44%), Gaps = 112/408 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ +IDG ++L DI D LWS+ FL A+ + H+D+++AG+D + T SYQ
Sbjct: 12 KIVIIDGATGTELERKGYDINDS--LWSAKFLMENPKAIYEVHKDYLEAGSDCITTLSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF E L+ + +L++SS+ +A+EA S++ I
Sbjct: 70 ATFEGFKE-RGLNEVQAKELLQSSIK-----LAIEARDEFWASNESKSRI---------- 113
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
L+A SVGPYGA L DGSE+RG+Y
Sbjct: 114 -----------------------------------KPLVAASVGPYGAYLADGSEFRGNY 138
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S+ + +HR R+QAL+EA D+LA ET+P EA+ +LL E+P +AW++FS
Sbjct: 139 --GLSQEELVNFHRKRMQALIEAKPDLLACETVPCLIEAKAYVKLLEEFPSTQAWITFSA 196
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPN 301
KD KHI++GES + A+ + N +Q++A+G+NC P + SLI Q+K P++VYPN
Sbjct: 197 KDGKHINSGESIKECAK--FLDNKEQVVAIGINCTAPQYIESLISQIKEVSTKPIIVYPN 254
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G YD
Sbjct: 255 GGAA--------------------------------------------------YDGATK 264
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWV 409
W + + K W ++G +++GGCC+T D ++ WV
Sbjct: 265 TWSTQANTKDYGKMAHLWYEKGASVIGGCCQTTPNDI----EQISSWV 308
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D KHI++GES + A+ + N +Q++A+G+NC P + LI Q+K P++VYPN
Sbjct: 198 DGKHINSGESIKECAK--FLDNKEQVVAIGINCTAPQYIESLISQIKEVSTKPIIVYPNG 255
Query: 569 GERYD 573
G YD
Sbjct: 256 GAAYD 260
>gi|296332201|ref|ZP_06874664.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305672941|ref|YP_003864612.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150693|gb|EFG91579.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411184|gb|ADM36302.1| homocysteine methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 315
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 178/410 (43%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L D + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPDLIKQIHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF AR S+ AR LI SV A
Sbjct: 73 EGFA-------------------------------ARGLSEAKARR-LIEMSVS-IAAVA 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA SVGPYGA L DGSEYRG Y
Sbjct: 100 RD-------------EFWALEENRLNRPKP----IIAASVGPYGAYLADGSEYRGHY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ITEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHHQIAAIGINCTPLQHIPSLIEELKKHTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD W
Sbjct: 259 --------------------------------------------------QYDPETKTWN 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
EP + W ++G L+GGCCRT ED + W L T
Sbjct: 269 GAACAEPYGQSARMWHEKGAKLIGGCCRTKPEDI----KEIAAWAHALKT 314
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHHQIAAIGINCTPLQHIPSLIEELKKHTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|224062371|ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222842550|gb|EEE80097.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 332
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 193/419 (46%), Gaps = 100/419 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V +IDGG +++L + D+ D PLWS+ L T+ V H D+++AGADI++T SY
Sbjct: 9 GGVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVRAVHLDYLEAGADIIITASY 66
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E + S L++ SV+ EA + + R R P
Sbjct: 67 QATIQGF-EAKGFSREDSEALLRKSVEIACEA--RDIYYGRCREGSP------------- 110
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
DGS+ G ++H R IL+A SVG YGA L DGSEY G+
Sbjct: 111 -----DGSD-DGRVLKH------------------RPILVAASVGSYGAYLADGSEYSGN 146
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + ++ T+ ++HR R+Q L E+GAD++A ET+P EAQ LL E + AW SF
Sbjct: 147 YGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQAYAELLEEEDIKIPAWFSF 206
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
+ KD ++ +G+S + +A +C N +AVG+NC P + LI + K P+
Sbjct: 207 NSKDGINVVSGDSLLECASIAESCKNA-----VAVGINCTPPRFIHELILSIKKVTTKPI 261
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE ++K W+
Sbjct: 262 LIYPNSGESYDG---------------------DRKEWVQ-------------------- 280
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTY 415
N D+D YV W + G ALVGGCCRT + L + + LS++
Sbjct: 281 ---NTGISDQDFV----SYVNKWCEIGAALVGGCCRTTPHTIRAIYKTLPNRSAALSSH 332
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVY 565
D ++ +G+S + +A +C N +AVG+NC P + LI +K P+++Y
Sbjct: 210 DGINVVSGDSLLECASIAESCKNA-----VAVGINCTPPRFIHELILSIKKVTTKPILIY 264
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 265 PNSGESYD 272
>gi|421725054|ref|ZP_16164255.1| homocysteine methyltransferase [Klebsiella oxytoca M5al]
gi|410374136|gb|EKP28816.1| homocysteine methyltransferase [Klebsiella oxytoca M5al]
Length = 310
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 174/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVDNPELIREVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY+
Sbjct: 103 --------------REAYLAE------NPQAGALLVAGSVGPYGAYLADGSEYRGDYLR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+ +D
Sbjct: 142 -SHEEFQAFHRPRVEALLDAGADLLACETLPNFAEIKALAELLTAYPRARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G +V N Q++A+G+NC+ ++ + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLREVIGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD V+ W
Sbjct: 259 H--------------------------------------------------YDPVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGEACATLAGYLPQWLAAGAKLIGGCCRTTPKD 302
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V N Q++A+G+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLREVIGVLANY--PQVVALGINCIALENTTAALAHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|421733176|ref|ZP_16172290.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407072991|gb|EKE45990.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 315
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 183/412 (44%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R ++ H E +RL P L+A S+GPYGASL DGSEYRG Y
Sbjct: 100 --------RDEFWAH-------EENRLHRPKP----LVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+++ + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTDDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEYIPPLIEEIKRAASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTND 453
+ E+ LH L + + Y + DG Y L D ++ HR +K
Sbjct: 106 HEENRLHRPKPL--VAASIGPYGASLADGSEYRGHYGLT--DDELISFHRPRMKA----- 156
Query: 454 FLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKH 513
L + + L + C K +T L+E TYA + K D +H
Sbjct: 157 -LIESGADLLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRH 202
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS G ++ A + + Q+ A+G+NC + PLIE++K + P++ YPNSGE+Y
Sbjct: 203 ISEGTPISECAALLDSCS--QIAAIGINCTPIEYIPPLIEEIKRAASKPIIAYPNSGEQY 260
Query: 573 D 573
D
Sbjct: 261 D 261
>gi|384263855|ref|YP_005419562.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387896748|ref|YP_006327044.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens Y2]
gi|380497208|emb|CCG48246.1| homocysteine methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387170858|gb|AFJ60319.1| homocysteine S-methyltransferase [Bacillus amyloliquefaciens Y2]
Length = 315
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 179/412 (43%), Gaps = 111/412 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V +IDG +++L D+ D LWS+ L + + Q H ++ AGAD +T SYQ+
Sbjct: 13 VMIIDGAMATELERMGCDLHDD--LWSAKILLERPELIKQVHAEYFAAGADCAITASYQS 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GF + D+ +LI++SV+ +A H RS P
Sbjct: 71 TIEGFAARGIPETDA-IRLIQTSVELAAQARDEFWAHEENRSHRP--------------- 114
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
L+A S+GPYGASL DGSEYRG Y
Sbjct: 115 ----------------------------------KPLVAASIGPYGASLADGSEYRGHY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + +HRPR++AL+E+GAD+LA ETIP EA+ + RLL E+P AW+SFS K
Sbjct: 140 -GLTEDELISFHRPRMKALIESGADLLACETIPCLSEAKAITRLLEEFPGTYAWISFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D +HIS G ++ A + + Q+ A+G+NC + LIE++K + + P++ YPNS
Sbjct: 199 DGRHISEGTPISECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRSASKPIIAYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YD V
Sbjct: 257 GE--------------------------------------------------QYDPVTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W K W + GV+L+GGCCRT D + DW L T
Sbjct: 267 WKGAACENHFGKSAQSWYENGVSLIGGCCRTKPADI----QAIADWAKTLKT 314
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 403 HRLDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSP 461
HR V+ + Y + DG Y L +D ++ HR +K L + +
Sbjct: 112 HRPKPLVAASIGPYGASLADGSEYRGHYGLT--EDELISFHRPRMKA------LIESGAD 163
Query: 462 NLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFT 521
L + C K +T L+E TYA + K D +HIS G +
Sbjct: 164 LLACETIPCLSEAKAITRLLEEFPG-------TYAWISFSAK------DGRHISEGTPIS 210
Query: 522 QVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+ A + + Q+ A+G+NC + PLIE++K + + P++ YPNSGE+YD
Sbjct: 211 ECAALLDSCS--QIAAIGINCTPIEHIPPLIEEIKRSASKPIIAYPNSGEQYD 261
>gi|452114164|gb|AGG09240.1| selenocysteine methyltransferase [Camellia sinensis]
Length = 351
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 180/399 (45%), Gaps = 104/399 (26%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+V +IDGG +++L + D+ D PLWS+ L T+ + + H D+++AGADI++T SY
Sbjct: 28 GSVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASY 85
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E + S ++K V+ +EA + + R S+D A D
Sbjct: 86 QATIQGF-EAKGFSQEESEAMLKRCVEIAREARDIYYENCRELSNDSADD---------- 134
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
G ++H R IL+A SVG YGA L DGSEY GD
Sbjct: 135 -----------GRLLKH------------------RSILVAASVGSYGAYLADGSEYSGD 165
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + + ++HR R+Q L +AGAD++A ET+P EAQ RLL E + AW SF
Sbjct: 166 YGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYARLLEEEDIKIPAWFSF 225
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD H+ +G+S + +A C +++AVG+NC P + LI +K P+
Sbjct: 226 NSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPPRFIHDLILTVKKGTTKPI 280
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE Y
Sbjct: 281 LIYPNSGES--------------------------------------------------Y 290
Query: 357 DAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
DA W+ D V W D G +LVGGCCRT
Sbjct: 291 DADKKEWVQNTGVSDDDFVSCVNTWCDVGASLVGGCCRT 329
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D H+ +G+S + +A C +++AVG+NC P + LI +K P+++Y
Sbjct: 229 DGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPPRFIHDLILTVKKGTTKPILIY 283
Query: 566 PNSGERYDFHLADEK 580
PNSGE YD AD+K
Sbjct: 284 PNSGESYD---ADKK 295
>gi|449522026|ref|XP_004168029.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
Length = 338
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 178/393 (45%), Gaps = 101/393 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L D+ D PLWS+ L T+ V + H D++ AGA+I+ T SYQA+I
Sbjct: 25 VLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E D S L++ SV+ IA+EA RDI
Sbjct: 83 QGF-EAKGFSRDESENLLRKSVE-----IAIEA-----------RDI------------- 112
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
++ T W T +R ILIA S+G YGA L DGSEY G+Y +
Sbjct: 113 ------------YLERCTKDSWDFTETGAGSRRPILIAASIGSYGAYLADGSEYSGEYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCK 243
V+ T+ ++HR R+Q L AGAD++A ETIP EAQ LL E AW SF+ K
Sbjct: 161 SVTLETLKDFHRRRVQILANAGADLIAFETIPNKLEAQAYAELLDEEGIEIPAWFSFNSK 220
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D ++ +G+S + A Q++AVG+NC P + LI ++ + P+VVYPNS
Sbjct: 221 DGINVVSGDSISDCASIA--DASKQVVAVGINCTPPRYIHGLILSIREVTDKPIVVYPNS 278
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YD V R
Sbjct: 279 GES--------------------------------------------------YDGVTKR 288
Query: 363 WIDRD--LCEPVDKYVTDWLDEGVALVGGCCRT 393
W+ D + E YV W + G +L GGCCRT
Sbjct: 289 WLKSDGMIGEDFVSYVRKWKEAGASLFGGCCRT 321
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
Q++AVG+NC P + LI ++ + P+VVYPNSGE YD
Sbjct: 243 QVVAVGINCTPPRYIHGLILSIREVTDKPIVVYPNSGESYD 283
>gi|429092540|ref|ZP_19155168.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 1210]
gi|426742739|emb|CCJ81281.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 1210]
Length = 310
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 180/403 (44%), Gaps = 115/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV A+A +A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSV-----ALARQA--------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ +A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------REDFLREQPDAG--------------PLLVAGSVGPYGAYLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+++A A +HRPR++AL+EAG D+LA ET+P+ EA+ L LL ++P +AW SF+ +D
Sbjct: 141 LTDAQFAAFHRPRVEALLEAGVDLLACETLPSLAEARALAVLLAQYPQARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPL--MVSSLIEQLKTENIPLVVYPNS 302
+HIS+G VA + P Q++A+G+NCV PL ++L +PLVVYPNS
Sbjct: 201 EHISDGSPLADVAAA---LAPYPQIVALGINCV-PLEDACAALARLHDATPLPLVVYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE +YDAV+
Sbjct: 257 GE--------------------------------------------------QYDAVSKT 266
Query: 363 WI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W D C + ++ W G AL+GGCCRT D + R
Sbjct: 267 WRHDGHTCHTLSHHLDAWRAAGAALIGGCCRTTPADIAALSAR 309
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPL--MVSPLIEQLKTENIPLVVYP 566
D +HIS+G VA + P Q++A+G+NCV PL + L +PLVVYP
Sbjct: 199 DSEHISDGSPLADVAAA---LAPYPQIVALGINCV-PLEDACAALARLHDATPLPLVVYP 254
Query: 567 NSGERYD 573
NSGE+YD
Sbjct: 255 NSGEQYD 261
>gi|94958323|gb|ABF47292.1| selenocysteine methyltransferase [Camellia sinensis]
Length = 351
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 186/397 (46%), Gaps = 100/397 (25%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+V +IDGG +++L + D+ D PLWS+ L T+ + + H D+++AGADI++T SY
Sbjct: 28 GSVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRRVHLDYLEAGADIIITASY 85
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E + S ++K V+ +EA + + R S+D A D
Sbjct: 86 QATIQGF-EAKGFSQEESEAMLKRCVEIAREARDIYYENCRELSNDSADD---------- 134
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
G ++H R IL+A SVG YGA L DGSEY GD
Sbjct: 135 -----------GRVLKH------------------RSILVAASVGSYGAYLADGSEYSGD 165
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + + ++HR R+Q L +AGAD++A ET+P EAQ RLL E + AW SF
Sbjct: 166 YGNAMDLEFLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYARLLEEEDIKIPAWFSF 225
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD H+ +G+S + +A C +++AVG+NC P + LI +K P+
Sbjct: 226 NSKDGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPPRFIHDLILTVKKGTTKPI 280
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE A ++K W+ N+G
Sbjct: 281 LIYPNSGESYDA---------------------DKKEWVQ--------------NTGVSD 305
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D D C V W D G +LVGGCCRT
Sbjct: 306 D-------DFVSC------VNTWCDVGASLVGGCCRT 329
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D H+ +G+S + +A C +++AVG+NC P + LI +K P+++Y
Sbjct: 229 DGVHVVSGDSLLECAAIAEAC-----KKVVAVGINCTPPRFIHDLILTVKKGTTKPILIY 283
Query: 566 PNSGERYDFHLADEK 580
PNSGE YD AD+K
Sbjct: 284 PNSGESYD---ADKK 295
>gi|432532493|ref|ZP_19769499.1| homocysteine S-methyltransferase [Escherichia coli KTE234]
gi|431064669|gb|ELD73534.1| homocysteine S-methyltransferase [Escherichia coli KTE234]
Length = 310
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 176/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAA-RGLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V + Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDV--VAFLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDV--VAFLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|443634479|ref|ZP_21118653.1| MmuM [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345715|gb|ELS59778.1| MmuM [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 315
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 179/410 (43%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILLEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA RD A
Sbjct: 73 EGFAA-RGLSEAEARRLIEMSVTIAAEA----------------RDEFWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
V E +RL P +IA SVGPYGA L DGSEYRG+Y
Sbjct: 106 -------------VGE------NRLNRPKP----IIAASVGPYGAYLADGSEYRGNY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + R+L+E+P W+SFS KD
Sbjct: 141 ISEDELVEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRVLKEFPETYTWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKQTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD W
Sbjct: 259 --------------------------------------------------QYDPETKTWN 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
EP + W ++G L+GGCCRT ED + W L T
Sbjct: 269 GAACAEPYGTSASTWHEKGAKLIGGCCRTKPEDI----QEIAAWARSLKT 314
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKQTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|357011163|ref|ZP_09076162.1| homocysteine methyltransferase [Paenibacillus elgii B69]
Length = 313
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 175/395 (44%), Gaps = 107/395 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG S++L + +I D PLWS+ L + + H D+ +AGAD +T+SYQA
Sbjct: 13 VIILDGALSTELERHGCNIDD--PLWSAKILMENPGLIGKVHTDYFEAGADCAITSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI GF++ + EA A + +R ARD
Sbjct: 71 SIDGFVK-----------------QGLSEAQATDLIQNSVRIAVRARD------------ 101
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
A W L+A SVGPYGA L DGSEYRGDY
Sbjct: 102 ---------------------AFWDTWKDKSARPRPLVAASVGPYGAYLADGSEYRGDY- 139
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++E + E+HRPR++ALVEAGAD+LA ETIP+ EA+ + LL+E+P AW+SFS K
Sbjct: 140 -RLTERELIEFHRPRVKALVEAGADLLACETIPSLLEAKAIVALLQEFPQVCAWMSFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNS 302
D + IS+GE + A + Q+ A+GVNC P + SLI ++ K P++VYPNS
Sbjct: 199 DGERISSGERMDECAE--WLDEQRQIAALGVNCTPPKYIPSLIHEIGKKTQKPILVYPNS 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE A R W + S C +
Sbjct: 257 GEQYAA---------------GTRTWHGAASEESLGCSAKA------------------- 282
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W +G L+GGCCRT +D
Sbjct: 283 ----------------WYGQGARLIGGCCRTTPDD 301
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D + IS+GE + A + Q+ A+GVNC P + LI ++ K P++VYPNS
Sbjct: 199 DGERISSGERMDECAE--WLDEQRQIAALGVNCTPPKYIPSLIHEIGKKTQKPILVYPNS 256
Query: 569 GERY 572
GE+Y
Sbjct: 257 GEQY 260
>gi|255567526|ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223535926|gb|EEF37585.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 343
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 183/394 (46%), Gaps = 94/394 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V +IDGG +++L + D+ D PLWS+ L T+ + H D+++AGADI++T SY
Sbjct: 21 GGVAVIDGGLATELERHGADLND--PLWSAKCLLTSPHLIRMVHLDYLEAGADIIITASY 78
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E S L+K SV+ EA E H D +AG+
Sbjct: 79 QATIQGF-EAKGFSSAESEALLKKSVEIACEA--REVYH----------DKCLAGACDDN 125
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
DG R++ P IL+A SVG YGA L DGSEY GD
Sbjct: 126 ----NDG--------------------RVLKKRP---ILVAASVGSYGAYLADGSEYSGD 158
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y E V+ T+ ++HR R+Q L EAGAD++A ET+P EAQ LL E + AW SF
Sbjct: 159 YGEAVTLGTLKDFHRRRVQVLAEAGADLIAFETVPNRVEAQAYAELLEEEDIKVPAWFSF 218
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ KD ++ +G+S + A + ++IAVG+NC P + LI + K + P+++Y
Sbjct: 219 NSKDGINVVSGDSLLECASIAESCR--KVIAVGINCTPPSFIHGLILSIKKVTSKPILIY 276
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE A ++K W+
Sbjct: 277 PNSGESYDA---------------------DRKEWVQ----------------------- 292
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
N D D YV W + G +LVGGCCRT
Sbjct: 293 NTGVTDEDFV----SYVNKWCEVGASLVGGCCRT 322
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D ++ +G+S + A + ++IAVG+NC P + LI +K + P+++YPNS
Sbjct: 222 DGINVVSGDSLLECASIAESCR--KVIAVGINCTPPSFIHGLILSIKKVTSKPILIYPNS 279
Query: 569 GERYDFHLADEKNNCVKSDVT 589
GE YD AD K + VT
Sbjct: 280 GESYD---ADRKEWVQNTGVT 297
>gi|321313909|ref|YP_004206196.1| homocysteine methyltransferase [Bacillus subtilis BSn5]
gi|320020183|gb|ADV95169.1| homocysteine methyltransferase [Bacillus subtilis BSn5]
Length = 315
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 185/410 (45%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA RD SL
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA----------------RDEFW---------SL 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ +RL P +IA S+GPYGA L DGSEYRG+Y
Sbjct: 107 KE--------------------NRLNRPKP----IIAASIGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G + A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT ED + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPEDI----QEIAAWARSLKT 314
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|449455288|ref|XP_004145385.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
gi|449472065|ref|XP_004153485.1| PREDICTED: homocysteine S-methyltransferase 3-like [Cucumis
sativus]
Length = 338
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 177/393 (45%), Gaps = 101/393 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L D+ D PLWS+ L T+ V + H D++ AGA+I+ T SYQA+I
Sbjct: 25 VLDGGFATELERLGADLND--PLWSAKCLLTSPHLVRRVHLDYLDAGANIISTASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E D S L++ SV IA+EA RDI
Sbjct: 83 QGF-EAKGFSRDESENLLRKSVQ-----IAIEA-----------RDI------------- 112
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
++ T W T +R ILIA S+G YGA L DGSEY G+Y +
Sbjct: 113 ------------YLERCTKDSWDFTETGAGSRRPILIAASIGSYGAYLADGSEYSGEYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCK 243
V+ T+ ++HR R+Q L AGAD++A ETIP EAQ LL E AW SF+ K
Sbjct: 161 SVTLETLKDFHRRRVQILANAGADLIAFETIPNKLEAQAYAELLDEEGIEIPAWFSFNSK 220
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D ++ +G+S + A Q++AVG+NC P + LI ++ + P+VVYPNS
Sbjct: 221 DGINVVSGDSISDCASIA--DASKQVVAVGINCTPPRYIHGLILSIREVTDKPIVVYPNS 278
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YD V R
Sbjct: 279 GES--------------------------------------------------YDGVTKR 288
Query: 363 WIDRD--LCEPVDKYVTDWLDEGVALVGGCCRT 393
W+ D + E YV W + G +L GGCCRT
Sbjct: 289 WLKSDGMIGEDFVSYVRKWKEAGASLFGGCCRT 321
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
Q++AVG+NC P + LI ++ + P+VVYPNSGE YD
Sbjct: 243 QVVAVGINCTPPRYIHGLILSIREVTDKPIVVYPNSGESYD 283
>gi|157147045|ref|YP_001454364.1| homocysteine methyltransferase [Citrobacter koseri ATCC BAA-895]
gi|157084250|gb|ABV13928.1| hypothetical protein CKO_02822 [Citrobacter koseri ATCC BAA-895]
Length = 310
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 176/398 (44%), Gaps = 111/398 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLVENPALIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + D S LI SV+ ++A
Sbjct: 76 AG-LAARGFDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DG+EYRGDYV
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGAEYRGDYV-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ T +HRPR++AL++AG D+LA ET+P E + L LL E+P +AW SF+ +D
Sbjct: 141 CTPETFQAFHRPRVEALLDAGVDLLACETLPNFIEIKALAELLTEYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
+H+S+G VA N P Q++A GVNC+ V++ ++ L +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVA-AFLNACP-QVVATGVNCIALENVTAALQHLHGLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
RYDAV+ W
Sbjct: 259 --------------------------------------------------RYDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ C + +Y+ WL G L+GGCCRT +D +
Sbjct: 269 HHGEACATLAEYLPQWLAAGAKLIGGCCRTTPKDIAEL 306
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G VA N P Q++A GVNC+ V+ ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVA-AFLNACP-QVVATGVNCIALENVTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GERYD
Sbjct: 257 GERYD 261
>gi|268679857|ref|YP_003304288.1| homocysteine S-methyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268617888|gb|ACZ12253.1| homocysteine S-methyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 311
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 178/409 (43%), Gaps = 111/409 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG F ++L DI D LWS+ FL +A+ + H D+++AG+D + T SYQA
Sbjct: 13 VFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLRAGSDCITTASYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S GFM+ + + + LI SSV K ++R D A + + P
Sbjct: 71 SFEGFMK-RGMSEEEAKALIASSVQIAK----------KVRDDFWADETNRTKRLKP--- 116
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
L+A SVGPYGA L DGSE+RGDY
Sbjct: 117 ------------------------------------LVAASVGPYGAYLADGSEFRGDYA 140
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V EA A +H R+ L+EA D+LA ETIP KEA+ LC LL ++P AW+SFS K
Sbjct: 141 LDV-EALQA-FHAKRLLTLIEAKPDLLACETIPCLKEAKALCTLLEDYPDVSAWMSFSAK 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPL-VVYPNS 302
D +HI++GES + A+ + N ++A+G+NC P + SLI ++K + L +VYPN
Sbjct: 199 DGEHINSGESVRECAQ--FLENQKNIVAIGINCTAPEFIESLIGEIKAVSSKLIIVYPNG 256
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G Y+A+
Sbjct: 257 G--------------------------------------------------ATYNALTKT 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG 411
W K W +G L+GGCC+T ED + WV G
Sbjct: 267 WNGLSKNASYGKMAYGWYQKGARLIGGCCQTTPEDIAQIAK----WVRG 311
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPL-VVYPNS 568
D +HI++GES + A+ + N ++A+G+NC P + LI ++K + L +VYPN
Sbjct: 199 DGEHINSGESVRECAQ--FLENQKNIVAIGINCTAPEFIESLIGEIKAVSSKLIIVYPNG 256
Query: 569 GERYD 573
G Y+
Sbjct: 257 GATYN 261
>gi|448243338|ref|YP_007407391.1| S-methylmethionine:homocysteine methyltransferase, CP4-6 prophage
[Serratia marcescens WW4]
gi|445213702|gb|AGE19372.1| S-methylmethionine:homocysteine methyltransferase, CP4-6 prophage
[Serratia marcescens WW4]
Length = 312
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 177/401 (44%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ LD + S LI SV + A
Sbjct: 76 QGFLRR-GLDQEQSLALIAKSVQLAQRA-------------------------------- 102
Query: 126 RDGSEYRGDYV-EHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
R DY+ EH A + LIAGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RRDYLAEHPQAAPL---------------LIAGSVGPYGAYLADGSEYRGDY-- 139
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+++ +HRPR+ AL AG D+LA ET+P+ E Q L LL+E+P AW +F+ +D
Sbjct: 140 RLAQDDFIAFHRPRLAALAVAGVDLLACETLPSFAELQALLTLLQEFPTLGAWFAFTLRD 199
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+H+S+G T+V + NP Q++A+G+NC+ V+ + QL + PL+VYPNSG
Sbjct: 200 SQHLSDGTPLTEV-MSALRGNP-QVLAIGINCIALDKVAPALRQLSALADKPLLVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH A+ K W +C E+ L
Sbjct: 258 EHYDAVS---------------------KTW--HACGGEHGSLA---------------- 278
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
T+W G L+GGCCRT +D + R
Sbjct: 279 ----------DQATEWRALGAQLIGGCCRTTPQDIRAIAAR 309
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G T+V + NP Q++A+G+NC+ V+P + QL + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTEV-MSALRGNP-QVLAIGINCIALDKVAPALRQLSALADKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|398797861|ref|ZP_10557171.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. GM01]
gi|398101758|gb|EJL91964.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. GM01]
Length = 311
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 177/394 (44%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGA + +T SYQA+
Sbjct: 17 ILDGALATELEARGCNLADA--LWSAKVLMENPELIYQVHHDYFAAGAHVAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LIK SV + A
Sbjct: 75 QGFAA-RGLDEAQALALIKQSVQLAQRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY S A+ A +L+AGSVGPYGA L +G+EYRGDY
Sbjct: 102 ------RDDY--RASSASTAP------------LLVAGSVGPYGAFLANGAEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E M +HRPR++AL++AG D+LA ET+P+ EAQ L LL E+P AW SF+ +D
Sbjct: 140 LPEEEMKAFHRPRVKALLQAGVDLLACETLPSFAEAQALISLLAEFPDSSAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPNSGE 304
+HIS+G +QVA N P Q++A+G+NCV V+ + L+ ++ PL+VYPNSGE
Sbjct: 200 EHISDGTPLSQVAEL-VNGAP-QVVAIGINCVALESVTPALRSLQAQSDKPLLVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ +W G L+GGCCRT +D
Sbjct: 268 SAPSGCTLHDKF-HEWQLAGARLIGGCCRTTPQD 300
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D +HIS+G +QVA N P Q++A+G+NCV V+P + L+ ++ PL+VYPNS
Sbjct: 198 DAEHISDGTPLSQVAEL-VNGAP-QVVAIGINCVALESVTPALRSLQAQSDKPLLVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|291289384|ref|YP_003517716.1| homocysteine S-methyltransferase [Klebsiella pneumoniae]
gi|290792345|gb|ADD63670.1| homocysteine S-methyltransferase [Klebsiella pneumoniae]
Length = 331
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 175/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 36 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 93
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 94 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 123
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 124 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 160
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 161 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 218
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 219 RDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 276
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 277 SGEH--------------------------------------------------YDAVSK 286
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 287 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 330
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 220 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 277
Query: 569 GERYD 573
GE YD
Sbjct: 278 GEHYD 282
>gi|16128246|ref|NP_414795.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|170079885|ref|YP_001729205.1| homocysteine methyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|187736899|ref|YP_001816637.1| homocysteine methyltransferase [Escherichia coli 1520]
gi|386703522|ref|YP_006167369.1| Homocysteine S-methyltransferase [Escherichia coli P12b]
gi|388476372|ref|YP_488556.1| S-methylmethionine:homocysteine methyltransferase [Escherichia coli
str. K-12 substr. W3110]
gi|417270676|ref|ZP_12058029.1| homocysteine S-methyltransferase [Escherichia coli 2.4168]
gi|417947527|ref|ZP_12590699.1| homocysteine methyltransferase [Escherichia coli XH140A]
gi|418959690|ref|ZP_13511587.1| homocysteine S-methyltransferase [Escherichia coli J53]
gi|432368295|ref|ZP_19611401.1| homocysteine S-methyltransferase [Escherichia coli KTE10]
gi|432484009|ref|ZP_19725936.1| homocysteine S-methyltransferase [Escherichia coli KTE212]
gi|432556480|ref|ZP_19793183.1| homocysteine S-methyltransferase [Escherichia coli KTE49]
gi|432669232|ref|ZP_19904782.1| homocysteine S-methyltransferase [Escherichia coli KTE119]
gi|432735771|ref|ZP_19970563.1| homocysteine S-methyltransferase [Escherichia coli KTE42]
gi|432979693|ref|ZP_20168477.1| homocysteine S-methyltransferase [Escherichia coli KTE211]
gi|433095098|ref|ZP_20281319.1| homocysteine S-methyltransferase [Escherichia coli KTE139]
gi|433172120|ref|ZP_20356686.1| homocysteine S-methyltransferase [Escherichia coli KTE232]
gi|450258532|ref|ZP_21902967.1| homocysteine methyltransferase [Escherichia coli S17]
gi|2495491|sp|Q47690.2|MMUM_ECOLI RecName: Full=Homocysteine S-methyltransferase; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
gi|1552830|gb|AAB08682.1| similar to S. cerevisiae YLL062c [Escherichia coli]
gi|1786456|gb|AAC73364.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. MG1655]
gi|85674405|dbj|BAA77929.2| S-methylmethionine:homocysteine methyltransferase [Escherichia coli
str. K12 substr. W3110]
gi|169887720|gb|ACB01427.1| CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|172051481|emb|CAP07823.1| MmuM [Escherichia coli]
gi|342360742|gb|EGU24917.1| homocysteine methyltransferase [Escherichia coli XH140A]
gi|383101690|gb|AFG39199.1| Homocysteine S-methyltransferase [Escherichia coli P12b]
gi|384377382|gb|EIE35276.1| homocysteine S-methyltransferase [Escherichia coli J53]
gi|386237019|gb|EII68991.1| homocysteine S-methyltransferase [Escherichia coli 2.4168]
gi|430889187|gb|ELC11856.1| homocysteine S-methyltransferase [Escherichia coli KTE10]
gi|431019446|gb|ELD32847.1| homocysteine S-methyltransferase [Escherichia coli KTE212]
gi|431095888|gb|ELE01485.1| homocysteine S-methyltransferase [Escherichia coli KTE49]
gi|431214050|gb|ELF11889.1| homocysteine S-methyltransferase [Escherichia coli KTE119]
gi|431288042|gb|ELF78828.1| homocysteine S-methyltransferase [Escherichia coli KTE42]
gi|431497374|gb|ELH76951.1| homocysteine S-methyltransferase [Escherichia coli KTE211]
gi|431620123|gb|ELI89005.1| homocysteine S-methyltransferase [Escherichia coli KTE139]
gi|431696585|gb|ELJ61746.1| homocysteine S-methyltransferase [Escherichia coli KTE232]
gi|449312016|gb|EMD02314.1| homocysteine methyltransferase [Escherichia coli S17]
Length = 310
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 175/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|229073009|ref|ZP_04206203.1| Homocysteine S-methyltransferase [Bacillus cereus F65185]
gi|229079518|ref|ZP_04212057.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-2]
gi|228703797|gb|EEL56244.1| Homocysteine S-methyltransferase [Bacillus cereus Rock4-2]
gi|228710127|gb|EEL62107.1| Homocysteine S-methyltransferase [Bacillus cereus F65185]
Length = 308
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 183/406 (45%), Gaps = 111/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + Q H D+ +AGAD +T SYQA+I
Sbjct: 2 LLDGALATELEAHGCNLDD--PLWSARVLLENPELIYQVHSDYFRAGADCAITASYQATI 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF S ++E ALE + ARD
Sbjct: 60 SGF-----------------SARGIQEQEALELIKKTVLLARRARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D+ + ++ T+ P L+ SVGPYGA L DGSEY G+Y
Sbjct: 89 --------DFWKENTQ----------TNRP--KPLVVASVGPYGAYLADGSEYVGNY--G 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ T+A++HR R+ AL+EAGAD+LA ETIP+ +EA++L LLRE+P AWLSFS K++
Sbjct: 127 VTDDTLADFHRSRMSALIEAGADLLAFETIPSLQEARVLDTLLREFPETYAWLSFSLKNE 186
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP-LVVYPNSGE 304
K IS G+ + AR +Q++A+G+NC +V+ I+ L+ ++VYPNSGE
Sbjct: 187 KEISEGKKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQALRANTKKSIIVYPNSGE 244
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+ W
Sbjct: 245 --------------------------------------------------TYNPETKTWH 254
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ C ++ +W G L+GGCCRT H++ + W S
Sbjct: 255 GHEQCNTLNIQSEEWYQAGARLIGGCCRT---TPYHIEEISNKWRS 297
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIP-LVVYPNS 568
++K IS G+ + AR +Q++A+G+NC +V+ I+ L+ ++VYPNS
Sbjct: 185 NEKEISEGKKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQALRANTKKSIIVYPNS 242
Query: 569 GERYD 573
GE Y+
Sbjct: 243 GETYN 247
>gi|15896591|ref|NP_349940.1| homocysteine methyltransferase [Clostridium acetobutylicum ATCC
824]
gi|337738552|ref|YP_004637999.1| homocysteine methyltransferase [Clostridium acetobutylicum DSM
1731]
gi|384460063|ref|YP_005672483.1| homocysteine methyltransferase [Clostridium acetobutylicum EA 2018]
gi|15026431|gb|AAK81280.1|AE007832_1 Possible homocysteine S-methyltransferase [Clostridium
acetobutylicum ATCC 824]
gi|325510752|gb|ADZ22388.1| homocysteine methyltransferase [Clostridium acetobutylicum EA 2018]
gi|336292910|gb|AEI34044.1| homocysteine methyltransferase [Clostridium acetobutylicum DSM
1731]
Length = 314
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 177/398 (44%), Gaps = 113/398 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L ++ D LWS+ LA + + H D+ +G+D +T+SYQA
Sbjct: 14 VVILDGALATELEKRGCNLNDS--LWSAKILANNPEIIENVHYDYFVSGSDCAITSSYQA 71
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+I GFM+ D + LI++SV K+ ARD
Sbjct: 72 TIDGFMKN-GFPRDKAKDLIRNSVAIAKK----------------ARD------------ 102
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
+ G+ + A IAGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RFWGNPTNRRNRAKP---------------FIAGSVGPYGAYLADGSEYRGDY- 140
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+ E + ++H+ ++ L+EAGADILA ETIP EA+ + +LL E+P AW+SFSCK
Sbjct: 141 -KIDENALIKFHKSNVKLLIEAGADILACETIPNLTEARAIVKLLEEFPGVYAWISFSCK 199
Query: 244 DDKHISNGESFTQVAR---TCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+D IS+G + A+ +C N + A+GVNC P ++SLI+++ K + P++VY
Sbjct: 200 NDYEISDGTPIFECAKVLNSCKN-----IAAIGVNCTSPKYINSLIKEIKKASDKPIIVY 254
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE YDA
Sbjct: 255 PNSGEE--------------------------------------------------YDAN 264
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W +W + G +++GGCCRT D
Sbjct: 265 TKTWHGASSSNAFSISAKEWFENGASVIGGCCRTTPSD 302
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQVAR---TCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVY 565
+D IS+G + A+ +C N + A+GVNC P ++ LI+++K + P++VY
Sbjct: 200 NDYEISDGTPIFECAKVLNSCKN-----IAAIGVNCTSPKYINSLIKEIKKASDKPIIVY 254
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 255 PNSGEEYD 262
>gi|430758733|ref|YP_007211018.1| hypothetical protein A7A1_3241 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023253|gb|AGA23859.1| Hypothetical protein YbgG [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 315
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 185/410 (45%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA RD SL
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA----------------RDEFW---------SL 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ +RL P +IA S+GPYGA L DGSEYRG+Y
Sbjct: 107 KE--------------------NRLNRPKP----IIAASIGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G + A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT E+ + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPENI----QEIAAWARSLKT 314
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|224825185|ref|ZP_03698291.1| homocysteine S-methyltransferase [Pseudogulbenkiania ferrooxidans
2002]
gi|224602856|gb|EEG09033.1| homocysteine S-methyltransferase [Pseudogulbenkiania ferrooxidans
2002]
Length = 321
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 157/305 (51%), Gaps = 60/305 (19%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L D+ D PLWS+ L + + Q H D+ AGAD+ T SYQA
Sbjct: 18 VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATTASYQA 75
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ GF D +++ L++ +V +A+EA A DPA
Sbjct: 76 TFEGFAR-RGYDAEAAAALMRRAVT-----LAVEARDAFW--SDPA-------------- 113
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
HR P L+A SVGPYGA L DGSEYRGDY
Sbjct: 114 ------------------------HRQGRPKP----LVAASVGPYGAMLADGSEYRGDY- 144
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ E + ++HRPR++ L+EAGAD+LA ETIP EA+ L RLL E+P +AW+SFSC
Sbjct: 145 -GLGEQQLMDFHRPRLKVLLEAGADLLACETIPCQVEARALARLLAEEFPSARAWISFSC 203
Query: 243 KDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYP 300
KD +H GE ++A +N +Q +AVGVNC P + +L+ PL+VYP
Sbjct: 204 KDGEHTCQGE---KLADAVAELNEVEQAVAVGVNCTAPEFIPALVAAAHGATTKPLLVYP 260
Query: 301 NSGEH 305
NSGEH
Sbjct: 261 NSGEH 265
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 58/149 (38%), Gaps = 47/149 (31%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCK-------------- 340
L V +G +LA ETIP EA+ L RLL E+P+ +AW+SFSCK
Sbjct: 159 LKVLLEAGADLLACETIPCQVEARALARLLAEEFPSARAWISFSCKDGEHTCQGEKLADA 218
Query: 341 --------------------------------TENIPLVVYPNSGERYDAVNARWIDRDL 368
PL+VYPNSGE YD + W
Sbjct: 219 VAELNEVEQAVAVGVNCTAPEFIPALVAAAHGATTKPLLVYPNSGEHYDPEHKCWHGHAD 278
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W G L+GGCCRT +D
Sbjct: 279 ANRFAEAARGWHQAGARLIGGCCRTTPQD 307
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPN 567
D +H GE ++A +N +Q +AVGVNC P + L+ PL+VYPN
Sbjct: 205 DGEHTCQGE---KLADAVAELNEVEQAVAVGVNCTAPEFIPALVAAAHGATTKPLLVYPN 261
Query: 568 SGERYD 573
SGE YD
Sbjct: 262 SGEHYD 267
>gi|449092935|ref|YP_007425426.1| homocysteine methyltransferase [Bacillus subtilis XF-1]
gi|449026850|gb|AGE62089.1| homocysteine methyltransferase [Bacillus subtilis XF-1]
Length = 315
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 181/410 (44%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA SVGPYGA L DGSEYRG+Y
Sbjct: 100 RD-------------EFWSLEENRLNRPKP----IIAASVGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 IPEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT ED + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPEDI----QEIAAWARSLKT 314
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|237730325|ref|ZP_04560806.1| S-methylmethionine:homocysteine methyltransferase [Citrobacter sp.
30_2]
gi|226905864|gb|EEH91782.1| S-methylmethionine:homocysteine methyltransferase [Citrobacter sp.
30_2]
Length = 310
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 175/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFAEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L +PLVVYPN
Sbjct: 198 RDSEHLSDGTLLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTLLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|347539363|ref|YP_004846788.1| homocysteine S-methyltransferase [Pseudogulbenkiania sp. NH8B]
gi|345642541|dbj|BAK76374.1| homocysteine S-methyltransferase [Pseudogulbenkiania sp. NH8B]
Length = 321
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 153/304 (50%), Gaps = 58/304 (19%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DG +++L D+ D PLWS+ L + + Q H D+ AGAD+ T SYQA
Sbjct: 18 VLILDGALATELQQRGCDLND--PLWSARVLIEEPELIRQVHEDYFAAGADVATTASYQA 75
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ GF D +++ L++ +V +A+EA A DPA
Sbjct: 76 TFEGFAR-RGYDAEAAAGLMRRAVT-----LAVEARDAFW--SDPA-------------- 113
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
HR P L+A SVGPYGA L DGSEYRGDY
Sbjct: 114 ------------------------HRQGRPKP----LVAASVGPYGAMLADGSEYRGDY- 144
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ E + ++HRPR++ L+EAGAD+LA ETIP EA+ L RLL E+P +AW+SFSC
Sbjct: 145 -GLGEQQLMDFHRPRLKVLLEAGADLLACETIPCQVEARALARLLAEEFPSARAWISFSC 203
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
KD H GE+ + Q++AVGVNC P + +L+ PL+VYPN
Sbjct: 204 KDGAHTCQGETLADAVAELNEVG--QVVAVGVNCTAPEFIPALVAAAHGATTKPLLVYPN 261
Query: 302 SGEH 305
SGEH
Sbjct: 262 SGEH 265
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 58/149 (38%), Gaps = 47/149 (31%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCK-------------- 340
L V +G +LA ETIP EA+ L RLL E+P+ +AW+SFSCK
Sbjct: 159 LKVLLEAGADLLACETIPCQVEARALARLLAEEFPSARAWISFSCKDGAHTCQGETLADA 218
Query: 341 --------------------------------TENIPLVVYPNSGERYDAVNARWIDRDL 368
PL+VYPNSGE YD + W
Sbjct: 219 VAELNEVGQVVAVGVNCTAPEFIPALVAAAHGATTKPLLVYPNSGEHYDPEHKCWHGHAD 278
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W G L+GGCCRT +D
Sbjct: 279 ANRFAEAARGWHQAGARLIGGCCRTTPQD 307
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D H GE+ + Q++AVGVNC P + L+ PL+VYPNS
Sbjct: 205 DGAHTCQGETLADAVAELNEVG--QVVAVGVNCTAPEFIPALVAAAHGATTKPLLVYPNS 262
Query: 569 GERYD 573
GE YD
Sbjct: 263 GEHYD 267
>gi|407979478|ref|ZP_11160292.1| homocysteine methyltransferase [Bacillus sp. HYC-10]
gi|407413864|gb|EKF35541.1| homocysteine methyltransferase [Bacillus sp. HYC-10]
Length = 312
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 157/302 (51%), Gaps = 60/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ +AGAD T SYQ +I
Sbjct: 15 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + L+K SV KEA L D+ R+ G P+
Sbjct: 73 DGFAE-KGYTKEEAIALMKRSVTLAKEACEL------FWQDETRRE----GRTKPF---- 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+AGSVGP+GA L DGSEY+G+Y
Sbjct: 118 -----------------------------------VAGSVGPFGAYLSDGSEYKGNY--R 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+SE + ++HRPRIQALVEAGADILA ETIP EA + +LL+ E+ AW++FS KD
Sbjct: 141 LSEQALIDFHRPRIQALVEAGADILACETIPCLIEATAIAKLLQDEFSGVYAWITFSAKD 200
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
D HIS G+ + + P +Q+ AVGVNC P +SSLI+++K + P+VVYPNS
Sbjct: 201 DLHISEGDLLKDCVQA---LEPYEQIAAVGVNCTPPQFISSLIQEMKKGTSKPIVVYPNS 257
Query: 303 GE 304
GE
Sbjct: 258 GE 259
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPN 567
DD HIS G+ + + P +Q+ AVGVNC P +S LI+++K + P+VVYPN
Sbjct: 200 DDLHISEGDLLKDCVQA---LEPYEQIAAVGVNCTPPQFISSLIQEMKKGTSKPIVVYPN 256
Query: 568 SGERYD 573
SGE YD
Sbjct: 257 SGELYD 262
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 47/144 (32%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCKTE----------------- 342
+G ILA ETIP EA + +LL+ E+ AW++FS K +
Sbjct: 159 EAGADILACETIPCLIEATAIAKLLQDEFSGVYAWITFSAKDDLHISEGDLLKDCVQALE 218
Query: 343 -----------------------------NIPLVVYPNSGERYDAVNARWIDRDLCEPVD 373
+ P+VVYPNSGE YD W
Sbjct: 219 PYEQIAAVGVNCTPPQFISSLIQEMKKGTSKPIVVYPNSGELYDPKEKVWSGDTSHRTFG 278
Query: 374 KYVTDWLDEGVALVGGCCRTYAED 397
+ W +G ++GGCCRT ED
Sbjct: 279 ECAHQWYKDGAQIIGGCCRTTPED 302
>gi|421081602|ref|ZP_15542512.1| Homocysteine methyltransferase [Pectobacterium wasabiae CFBP 3304]
gi|401703691|gb|EJS93904.1| Homocysteine methyltransferase [Pectobacterium wasabiae CFBP 3304]
Length = 315
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 174/402 (43%), Gaps = 119/402 (29%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI-LIAGSVGP 120
QA+ GF + R A + LIA SV
Sbjct: 71 QATPQGF---------------------------------KTRGYSEAESLTLIAKSV-Q 96
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A RD +YR D + A +L+AGSVGPYGA L DGSEYRG
Sbjct: 97 LAAQARD--DYRRD------------------NPQAGVLLVAGSVGPYGAYLADGSEYRG 136
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF
Sbjct: 137 DY--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEFPQAQAWFSF 194
Query: 241 SCKDDKHISNGESFTQV---ARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPL 296
+ +D +H+S+G V C Q++AVG+NC+ V+ + L + N+PL
Sbjct: 195 TLRDSEHLSDGTPLHTVLERVNACL-----QVVAVGINCIALENVTPALTYLSSLTNLPL 249
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
VVYPNSGE Y
Sbjct: 250 VVYPNSGEQ--------------------------------------------------Y 259
Query: 357 DAVNARWID-RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DA+ W D + Y+ +W G L+GGCCRT D
Sbjct: 260 DALTKTWSSGHDAACSLTAYLPEWRAAGARLIGGCCRTTPAD 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQV---ARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVY 565
D +H+S+G V C Q++AVG+NC+ V+P + L + N+PLVVY
Sbjct: 198 DSEHLSDGTPLHTVLERVNACL-----QVVAVGINCIALENVTPALTYLSSLTNLPLVVY 252
Query: 566 PNSGERYD 573
PNSGE+YD
Sbjct: 253 PNSGEQYD 260
>gi|253687924|ref|YP_003017114.1| homocysteine S-methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754502|gb|ACT12578.1| homocysteine S-methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 315
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 178/396 (44%), Gaps = 115/396 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SYQA+
Sbjct: 17 VLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E S LI SV +A
Sbjct: 75 QGF-EARGYSEAESLALIAKSVQLAAQA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD +YR D + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 RD--DYRHD------------------NPQAGALLVAGSVGPYGAYLADGSEYRGDY--Q 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +A M +HRPR+ AL+EAGAD+LA ET+P+ E + L LL E+P +AWLSF+ +D
Sbjct: 140 LPQADMMAFHRPRMAALLEAGADLLACETLPSFAEIETLIALLAEFPQAQAWLSFTLRDS 199
Query: 246 KHISNGESF-TQVAR--TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+H+S+G T +AR C Q++AVG+NC+ V+ + L + ++PLVVYPN
Sbjct: 200 EHLSDGSPLRTVLARVNAC-----SQVVAVGINCIALEKVTPALTYLSSLTDLPLVVYPN 254
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE A+ K W S +DA +
Sbjct: 255 SGEQYDAV---------------------TKTWSS------------------AHDAACS 275
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ Y+ +W G L+GGCCRT D
Sbjct: 276 ----------LTAYLPEWQAAGARLIGGCCRTTPAD 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESF-TQVAR--TCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVY 565
D +H+S+G T +AR C Q++AVG+NC+ V+P + L + ++PLVVY
Sbjct: 198 DSEHLSDGSPLRTVLARVNAC-----SQVVAVGINCIALEKVTPALTYLSSLTDLPLVVY 252
Query: 566 PNSGERYD 573
PNSGE+YD
Sbjct: 253 PNSGEQYD 260
>gi|398309337|ref|ZP_10512811.1| homocysteine methyltransferase [Bacillus mojavensis RO-H-1]
Length = 315
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 177/410 (43%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCDLNDS--LWSAKILMEQPELIKQVHADYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA RD A
Sbjct: 73 EGFAA-RGLSEAEARRLIQMSVSIAAEA----------------RDEFWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ +RL P ++A SVGPYGA L DGSEYRG+Y
Sbjct: 106 -------------------QKENRLNRPKP----IVAASVGPYGAYLADGSEYRGNY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E +AE+HRPR++AL++AGAD+LA ETIP EA+ + LL+E+P AW SFS KD
Sbjct: 141 ITEEELAEFHRPRMKALIDAGADVLACETIPCLTEAKAIVSLLKEFPDTYAWFSFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q AVG+NC +SSLI +LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDQHSQAAAVGINCTPLQHISSLIAELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P+ K W +C
Sbjct: 259 QYD---------------------PDTKTWNGAACG------------------------ 273
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
EP + W + G L+GGCCRT ED + W L T
Sbjct: 274 -----EPYGQSARIWFENGAKLIGGCCRTKPEDI----KEIAGWARTLKT 314
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q AVG+NC +S LI +LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDQHSQAAAVGINCTPLQHISSLIAELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|227113027|ref|ZP_03826683.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 315
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 167/344 (48%), Gaps = 68/344 (19%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + S LI SV +A DD RD AG+
Sbjct: 71 QATPQGF-KARGYSETESLALIAKSVQLAAQA-----------RDDYRRDNPQAGT---- 114
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+L+AGSVGPYGA L DGSEYRGD
Sbjct: 115 -------------------------------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESF-TQVAR--TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLV 297
+D +H+S+G S T +AR C Q++AVG+NC+ V+ ++ L + ++PLV
Sbjct: 196 LRDSEHLSDGTSLRTVLARVNAC-----SQVVAVGINCIALENVTPALKHLSSLTDLPLV 250
Query: 298 VYPNSGEHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
VYPNSGE A+ A +A L L EW A L C
Sbjct: 251 VYPNSGEQYDAVTKTWSSAHDDACSLTAYLPEWQAAGARLIGGC 294
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 61/145 (42%), Gaps = 49/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
+G +LA ET+P+ E + L LL E+P +AW SF+ +
Sbjct: 158 EAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFTLRDSEHLSDGTSLRTVLARVNA 217
Query: 341 -------------TENI-------------PLVVYPNSGERYDAVNARWIDR--DLCEPV 372
EN+ PLVVYPNSGE+YDAV W D C +
Sbjct: 218 CSQVVAVGINCIALENVTPALKHLSSLTDLPLVVYPNSGEQYDAVTKTWSSAHDDACS-L 276
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
Y+ +W G L+GGCCRT D
Sbjct: 277 TAYLPEWQAAGARLIGGCCRTTPAD 301
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESF-TQVAR--TCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVY 565
D +H+S+G S T +AR C Q++AVG+NC+ V+P ++ L + ++PLVVY
Sbjct: 198 DSEHLSDGTSLRTVLARVNAC-----SQVVAVGINCIALENVTPALKHLSSLTDLPLVVY 252
Query: 566 PNSGERYD 573
PNSGE+YD
Sbjct: 253 PNSGEQYD 260
>gi|432529669|ref|ZP_19766717.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
gi|431057365|gb|ELD66816.1| homocysteine S-methyltransferase [Escherichia coli KTE233]
Length = 310
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 174/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
E +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------RETYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|421845543|ref|ZP_16278696.1| homocysteine methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411773078|gb|EKS56649.1| homocysteine methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 311
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 174/401 (43%), Gaps = 110/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF DLD S LI SV+ ++A
Sbjct: 76 AGFAA-RDLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E L LL +P +AW SF+ +D
Sbjct: 143 AEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
+H+S+G V P Q++A+G+NC+ ++ ++ L +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVALLAAGYP-QVVALGINCIALENTTAALQHLHGLTALPLVVYPNSGE 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDAV+ W
Sbjct: 260 --------------------------------------------------QYDAVSKTWH 269
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + Y+ W G L+GGCCRT +D +K R
Sbjct: 270 HHGEHCAHLADYLPQWQAAGARLIGGCCRTTPKDIAALKAR 310
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V P Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAAGYP-QVVALGINCIALENTTAALQHLHGLTALPLVVYPNS 257
Query: 569 GERYD 573
GE+YD
Sbjct: 258 GEQYD 262
>gi|385872474|gb|AFI90994.1| Homocysteine S-methyltransferase [Pectobacterium sp. SCC3193]
Length = 313
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 173/397 (43%), Gaps = 109/397 (27%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ AGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF AR A S+
Sbjct: 71 QATPQGFK---------------------------------------ARGYSEAESLTLI 91
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
S++ ++ R DY S+A + +L+AGSVGPYGA L DGSEYRGD
Sbjct: 92 AKSVQLAAQARDDYRRDNSQAGV--------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
+D +H+S+G V N P Q++AVG+NC+ V+ + L + N+PLVVYP
Sbjct: 196 LRDSEHLSDGTPLRTVLER-VNACP-QVVAVGINCIALENVTPALTYLSSLTNLPLVVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE AI K W S
Sbjct: 254 NSGEQYDAI---------------------TKTWSS------------------------ 268
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D + Y+ +W G L+GGCCRT D
Sbjct: 269 ----GHDAACSLAAYLPEWQAAGARLIGGCCRTTPAD 301
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V N P Q++AVG+NC+ V+P + L + N+PLVVYPNS
Sbjct: 198 DSEHLSDGTPLRTVLER-VNACP-QVVAVGINCIALENVTPALTYLSSLTNLPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|330920354|ref|XP_003298974.1| hypothetical protein PTT_09865 [Pyrenophora teres f. teres 0-1]
gi|311327538|gb|EFQ92923.1| hypothetical protein PTT_09865 [Pyrenophora teres f. teres 0-1]
Length = 319
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 160/339 (47%), Gaps = 61/339 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++ L T DI LWS+ L + QTH D+ +AGA++ +T SYQASI
Sbjct: 21 ILDGALATYLETLGADI--SGALWSASILLDQPSLIKQTHLDYFRAGANVAITASYQASI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L L + ++K SV+ +EA RD I S G L
Sbjct: 79 PGLVKHLQLSEREAKDVVKKSVELAQEA----------------RDHYITESTAEVGNQL 122
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
IAGSVGPYGA L DGSEYRGDY
Sbjct: 123 ----------------------------------FIAGSVGPYGAFLADGSEYRGDY--S 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+ M ++HR RIQALVEAG DILA ETIP+ E + L LL E+ +AW F+ +D
Sbjct: 147 IPREEMKDFHRGRIQALVEAGVDILACETIPSKAETEALLDLLITEFASTEAWFGFTLRD 206
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
HIS+G S +A N+ Q++A+G NCV + + ++ LK + LVVYPNS
Sbjct: 207 SAHISDGTSLADIAALFENVQ--QVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPNS 264
Query: 303 GEH--ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
GE A E E L REW + A L C
Sbjct: 265 GEQWNAQAREWEGKRTEGSSLAEKTREWRDAGAGLIGGC 303
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 49/154 (31%)
Query: 302 SGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKT-----------------EN 343
+G ILA ETIP+ E + L LL E+ + +AW F+ + EN
Sbjct: 166 AGVDILACETIPSKAETEALLDLLITEFASTEAWFGFTLRDSAHISDGTSLADIAALFEN 225
Query: 344 I------------------------------PLVVYPNSGERYDAVNARWI-DRDLCEPV 372
+ LVVYPNSGE+++A W R +
Sbjct: 226 VQQVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPNSGEQWNAQAREWEGKRTEGSSL 285
Query: 373 DKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ +W D G L+GGCCRT ED M+ L+
Sbjct: 286 AEKTREWRDAGAGLIGGCCRTTPEDIGVMEKALN 319
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D HIS+G S +A N+ Q++A+G NCV + ++ LK + LVVYPN
Sbjct: 206 DSAHISDGTSLADIAALFENVQ--QVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPN 263
Query: 568 SGERYD 573
SGE+++
Sbjct: 264 SGEQWN 269
>gi|196012640|ref|XP_002116182.1| hypothetical protein TRIADDRAFT_60203 [Trichoplax adhaerens]
gi|190581137|gb|EDV21215.1| hypothetical protein TRIADDRAFT_60203 [Trichoplax adhaerens]
Length = 321
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 179/406 (44%), Gaps = 104/406 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ +IDG ++L +G +D PLWS+ L T + H ++ AGADI++T +YQA
Sbjct: 5 ILVIDGACGTELQR-LGYDVDADPLWSASLLLTNPQVIKDLHTSYLNAGADIILTATYQA 63
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI G +++ DL S+ S+V + +A+E ARD A
Sbjct: 64 SIPGLVQYADLTEASA-----SAVIAMAVRLAIE-----------ARDEFWAEQKACNKN 107
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R L+ GSVGP+GA DGSE+ G Y
Sbjct: 108 VRRPKP------------------------------LVVGSVGPFGACQHDGSEFHGRYT 137
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+ ++ + +WH+PRI L++ G D++A ETIPA KEA L ++L + KAWLSF CK
Sbjct: 138 DEMTIEELKQWHKPRIMELIQNGVDLIAFETIPAEKEAIALIQVLETFRGVKAWLSFVCK 197
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE---QLKTENIPLVVYP 300
DD H+++GE F V N N Q++A+G NC P V +LI+ +L + P + YP
Sbjct: 198 DDLHLNHGELFADVMERFRNHN--QIVAIGTNCTNPQNVDNLIQSCKRLDAYDKPFIAYP 255
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE +W S IP V + +R+
Sbjct: 256 NSGE----------------------------SW-SVDRWDPTIPPVELSDYVQRWIKNG 286
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
RWI GGCCRT D L +++++D
Sbjct: 287 IRWI-----------------------GGCCRTTPSDILKIRNKVD 309
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIE---QLKTENIPLVVYP 566
DD H+++GE F V N N Q++A+G NC P V LI+ +L + P + YP
Sbjct: 198 DDLHLNHGELFADVMERFRNHN--QIVAIGTNCTNPQNVDNLIQSCKRLDAYDKPFIAYP 255
Query: 567 NSGERY 572
NSGE +
Sbjct: 256 NSGESW 261
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
YV W+ G+ +GGCCRT D L +++++D
Sbjct: 278 YVQRWIKNGIRWIGGCCRTTPSDILKIRNKVD 309
>gi|428277657|ref|YP_005559392.1| homocysteine methyltransferase [Bacillus subtilis subsp. natto
BEST195]
gi|291482614|dbj|BAI83689.1| homocysteine methyltransferase [Bacillus subtilis subsp. natto
BEST195]
Length = 315
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 182/410 (44%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA SVGPYGA L DGSEYRG+Y
Sbjct: 100 RD-------------EFWSLEENRLNRPKP----IIAASVGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT E+ + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPENI----QEIAAWARSLKT 314
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|433460739|ref|ZP_20418363.1| homocysteine methyltransferase [Halobacillus sp. BAB-2008]
gi|432191087|gb|ELK48068.1| homocysteine methyltransferase [Halobacillus sp. BAB-2008]
Length = 290
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 176/397 (44%), Gaps = 114/397 (28%)
Query: 11 FSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFME 70
+++L TY D+ D PLWS+ L DA+ + H D+ + GADI +T SYQA+I GF +
Sbjct: 1 MATELETYGFDLDD--PLWSARVLLENPDAIRKVHADYFRNGADIAITASYQATIDGFKQ 58
Query: 71 FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSE 130
+D D + LIK
Sbjct: 59 -RGIDEDKARTLIK---------------------------------------------- 71
Query: 131 YRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEAT 190
D V EA W DD A + +AGSVGPYGA L DGSEY G+Y V++
Sbjct: 72 ---DTVRLAQEARSDVWRE--ADDRAYPV-VAGSVGPYGAYLADGSEYIGNY--GVTDER 123
Query: 191 MAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISN 250
+ E+HRPRI+AL+EAGAD+LA ETIP+ +EA++L LL E+P AWLSFS K+ IS+
Sbjct: 124 LKEFHRPRIEALIEAGADVLAFETIPSLQEAEVLTELLGEYPGASAWLSFSLKNGSQISD 183
Query: 251 GESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHIL 307
G + R C ++ +Q++AVGVNC + + ++ + P+++YPNSGE
Sbjct: 184 GTEW----RRCIDVIEGREQVVAVGVNCAPIPDATEAVGHIRALTDKPIILYPNSGET-- 237
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRD 367
YD W
Sbjct: 238 ------------------------------------------------YDPDTNDWYGER 249
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
C+ D+ W++ G ++GGCCRT + + R
Sbjct: 250 SCQRFDEQSDRWVEAGATIIGGCCRTTPDHIQSLARR 286
>gi|224085515|ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222857051|gb|EEE94598.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 341
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 182/399 (45%), Gaps = 105/399 (26%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V +IDGG +++L + D+ D PLWS+ L T+ V + H D+++AGADI++T SY
Sbjct: 20 GGVAIIDGGLATELERHGADLND--PLWSAKCLLTSPHLVREVHLDYLEAGADIIITASY 77
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E + S L++ SV IA EA RDI Y
Sbjct: 78 QATIQGF-EAKGFSGEESESLLRKSVK-----IACEA-----------RDI--------Y 112
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+ GS + R++ P IL+A S+G YGA L DGSEY G+
Sbjct: 113 YDRCQKGSPDSNN-------------GRVLKQRP---ILVAASIGSYGAYLADGSEYSGN 156
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + ++ T+ ++HR R+Q L E+GAD++A ET+P EAQ LL+E + AW SF
Sbjct: 157 YGDAITLETLKDFHRRRVQILAESGADLIAFETVPNKVEAQAYVELLKEEDIKIPAWFSF 216
Query: 241 SCKDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
+ KD ++ +G+S +A +C N+ +AVG+NC P + LI + K P+
Sbjct: 217 NSKDGVNVVSGDSLLDCASIAESCQNV-----VAVGINCTPPRFIHGLILSIKKVTTKPI 271
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE Y
Sbjct: 272 LIYPNSGES--------------------------------------------------Y 281
Query: 357 DAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
D W+ D YV W + G ALVGGCCRT
Sbjct: 282 DGKRKEWVQNTGISDQDFVSYVNKWCEIGAALVGGCCRT 320
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIP 561
+ D ++ +G+S +A +C N+ +AVG+NC P + LI +K P
Sbjct: 216 FNSKDGVNVVSGDSLLDCASIAESCQNV-----VAVGINCTPPRFIHGLILSIKKVTTKP 270
Query: 562 LVVYPNSGERYD 573
+++YPNSGE YD
Sbjct: 271 ILIYPNSGESYD 282
>gi|16077310|ref|NP_388123.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308054|ref|ZP_03589901.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312377|ref|ZP_03594182.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221317310|ref|ZP_03598604.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221321574|ref|ZP_03602868.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|402774481|ref|YP_006628425.1| homocysteine methylase [Bacillus subtilis QB928]
gi|452916367|ref|ZP_21964991.1| homocysteine S-methyltransferase [Bacillus subtilis MB73/2]
gi|81341836|sp|O31463.1|HMT_BACSU RecName: Full=Homocysteine S-methyltransferase YbgG; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
gi|2632527|emb|CAB12035.1| homocysteine methylase using (R,S)AdoMet [Bacillus subtilis subsp.
subtilis str. 168]
gi|3599664|dbj|BAA33139.1| ybgG [Bacillus subtilis]
gi|402479666|gb|AFQ56175.1| Homocysteine methylase using (R,S)AdoMet [Bacillus subtilis QB928]
gi|407955931|dbj|BAM49171.1| homocysteine methyltransferase [Bacillus subtilis BEST7613]
gi|407963202|dbj|BAM56441.1| homocysteine methyltransferase [Bacillus subtilis BEST7003]
gi|452114865|gb|EME05263.1| homocysteine S-methyltransferase [Bacillus subtilis MB73/2]
Length = 315
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 182/410 (44%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA S+GPYGA L DGSEYRG+Y
Sbjct: 100 RD-------------EFWSLEENRLNRPKP----IIAASIGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT E+ + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPENI----QEIAAWARSLKT 314
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|195940986|ref|ZP_03086368.1| homocysteine methyltransferase [Escherichia coli O157:H7 str.
EC4024]
Length = 261
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 160/355 (45%), Gaps = 109/355 (30%)
Query: 45 HRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIR 104
H D+ +AGA + +T SYQA+ GF LD S LI SV+ ++A
Sbjct: 6 HLDYYRAGAQVAITASYQATPAGFAA-RGLDEAQSRALIGKSVELARKA----------- 53
Query: 105 SDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGS 164
EA +AE + A +L+AGS
Sbjct: 54 -----------------------------------REAYLAE------NAQAGTLLVAGS 72
Query: 165 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQML 224
VGPYGA L DGSEYRGDY E T E+HRPR++AL++AGAD+LA ET+P+ E + L
Sbjct: 73 VGPYGAYLADGSEYRGDYERRAEEFT--EFHRPRVEALLDAGADLLACETLPSFPEIKAL 130
Query: 225 CRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSS 284
LL +P +AW SF+ +D +H+S+G V N Q++A+G+NC+ ++
Sbjct: 131 AALLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVSVLENY--PQVVALGINCIALENTTA 188
Query: 285 LIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN 343
+ L + ++PLVVYPNSGEH
Sbjct: 189 ALTHLHSLTSLPLVVYPNSGEH-------------------------------------- 210
Query: 344 IPLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
YDAV+ W + CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 211 ------------YDAVSKTWHHHGEACETLAGYLPQWLEAGAKLIGGCCRTTPKD 253
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V N Q++A+G+NC+ + + L + ++PLVVYPNS
Sbjct: 150 DSEHLSDGTPLRDVVSVLENY--PQVVALGINCIALENTTAALTHLHSLTSLPLVVYPNS 207
Query: 569 GERYD 573
GE YD
Sbjct: 208 GEHYD 212
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 468 DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 498
+ CE + Y+ WL+ G L+GGCCRT +D
Sbjct: 223 EACETLAGYLPQWLEAGAKLIGGCCRTTPKD 253
>gi|336359707|gb|AEI53593.1| selenocysteine methyltransferase [Astragalus chrysochlorus]
Length = 339
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 193/407 (47%), Gaps = 104/407 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+ Y
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDLY-------YQR 109
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
S+ GD R++ P ILIAGSVG YGA L DGSEY G+Y
Sbjct: 110 CAESSSDNNGDD------------SRILKQRP---ILIAGSVGSYGAYLADGSEYSGNYG 154
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSC 242
+ + T+ ++HR R+Q L ++GAD+LA ETIP EAQ LL E AW +F+
Sbjct: 155 DAIKLETLKDFHRRRVQILADSGADLLAFETIPNKLEAQAYADLLEEENITTPAWFTFNS 214
Query: 243 KDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVV 298
KD ++ +G+S + +A +C ++++AVG+NC P + LI LK P+V+
Sbjct: 215 KDGTNVVSGDSIEECGSIAESC-----NKVVAVGINCTPPRFIHDLILLLKKVTAKPIVI 269
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE I +K W+
Sbjct: 270 YPNSGETYDGI---------------------RKEWMQ---------------------- 286
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 287 -NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 327
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C ++++AVG+NC P + LI LK P+V+Y
Sbjct: 216 DGTNVVSGDSIEECGSIAESC-----NKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 270
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 271 PNSGETYD 278
>gi|325916613|ref|ZP_08178876.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas vesicatoria
ATCC 35937]
gi|325537167|gb|EGD08900.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas vesicatoria
ATCC 35937]
Length = 320
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 169/395 (42%), Gaps = 113/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 LLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV +A
Sbjct: 83 LGFAAR-GLDLAQSQALIARSVALAAQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+++ +A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 110 ------RDDHLQAQPDAA--------------PLWVAGSVGPYGAYLADGSEYRGDYA-- 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A + E+HRPRI AL AG D+LA ET+P++ E L LL E+PH AW SF+ +D
Sbjct: 148 LPLAQLMEFHRPRIAALAAAGVDVLACETLPSANEIVALRLLLEEFPHLHAWFSFTLRDA 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G V Q+IAVG+NC+ V++ ++ L +PLVVYPNSGE
Sbjct: 208 DHLSDGTPLAHVIPALDACA--QVIAVGINCIALDQVTAALQSLSALTTLPLVVYPNSGE 265
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDA + RW
Sbjct: 266 H--------------------------------------------------YDAGDKRWH 275
Query: 365 DRDL--CEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C D++ T WL G L+GGCCRT D
Sbjct: 276 GGNAPGCSLADQH-TRWLAAGARLIGGCCRTTPRD 309
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G V Q+IAVG+NC+ V+ ++ L +PLVVYPNS
Sbjct: 206 DADHLSDGTPLAHVIPALDACA--QVIAVGINCIALDQVTAALQSLSALTTLPLVVYPNS 263
Query: 569 GERYD 573
GE YD
Sbjct: 264 GEHYD 268
>gi|332529802|ref|ZP_08405756.1| homocysteine methyltransferase [Hylemonella gracilis ATCC 19624]
gi|332040823|gb|EGI77195.1| homocysteine methyltransferase [Hylemonella gracilis ATCC 19624]
Length = 322
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 160/337 (47%), Gaps = 60/337 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L D + Q H D+ AGAD+ T SYQA+
Sbjct: 19 VLDGALATELERRGADLKD--PLWSAKLLIEQPDLIRQVHLDYFVAGADVSTTASYQATF 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F L +D + L++ SV E ARD
Sbjct: 77 EAFAR-RGLGHDEAADLMRRSVQLACE----------------ARD-------------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A W R L+A SVGPYGA L DGSEYRG
Sbjct: 106 -------------------AFWSDPKHRAGRRKPLVAASVGPYGAMLADGSEYRG--YPG 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
VS A +A +HRPR+Q L +GAD+LA ET+P EA + LL E+P +AW+SFSC+D
Sbjct: 145 VSRAALAAFHRPRLQVLAHSGADLLACETLPCLAEALAITDLLPEFPGVQAWISFSCRDG 204
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+H S GE +A ++P Q+ AVGVNC P V SL+E+ + + P+VVYPNSG
Sbjct: 205 EHNSQGEP---LADCVAALDPVPQVAAVGVNCTAPEFVPSLVERARARTSKPIVVYPNSG 261
Query: 304 EHILAIETI-PASKEAQMLCRLLREWPNQKAWLSFSC 339
EH A+ + +A W N+ A L C
Sbjct: 262 EHYDAVGKVWQGEGQAHDFAAQAMRWHNRGARLIGGC 298
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 46/154 (29%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK--------------- 340
L V +SG +LA ET+P EA + LL E+P +AW+SFSC+
Sbjct: 158 LQVLAHSGADLLACETLPCLAEALAITDLLPEFPGVQAWISFSCRDGEHNSQGEPLADCV 217
Query: 341 -------------------------------TENIPLVVYPNSGERYDAVNARWIDRDLC 369
+ P+VVYPNSGE YDAV W
Sbjct: 218 AALDPVPQVAAVGVNCTAPEFVPSLVERARARTSKPIVVYPNSGEHYDAVGKVWQGEGQA 277
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
W + G L+GGCCRT +D ++
Sbjct: 278 HDFAAQAMRWHNRGARLIGGCCRTGPDDIRALRQ 311
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPN 567
D +H S GE +A ++P Q+ AVGVNC P V L+E+ + + P+VVYPN
Sbjct: 203 DGEHNSQGEP---LADCVAALDPVPQVAAVGVNCTAPEFVPSLVERARARTSKPIVVYPN 259
Query: 568 SGERYD 573
SGE YD
Sbjct: 260 SGEHYD 265
>gi|189194487|ref|XP_001933582.1| homocysteine S-methyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979146|gb|EDU45772.1| homocysteine S-methyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 169/339 (49%), Gaps = 61/339 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++ L T DI LWS+ L + QTH D+ +A A++ +T SYQASI
Sbjct: 21 ILDGALATYLETLGADI--SGALWSASILLDQPSLIKQTHLDYYRANANVAITASYQASI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L L+ + ++K SV+ +EA
Sbjct: 79 PGLVKHLQLNEKEAKDVVKKSVELAQEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD ++++E+T ++L IAGSVGPYGA L DGSEYRGDY
Sbjct: 107 RD---------QYITESTAKVGNQL---------FIAGSVGPYGAFLADGSEYRGDY--S 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+ + M ++HR RIQALVEAG DILA ETIP+ E + + LL E+ +AW F+ +D
Sbjct: 147 IPKEEMKDFHRGRIQALVEAGVDILACETIPSKAETEAIIDLLTTEFASTEAWFGFTLRD 206
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
+HIS+G S ++A N+ Q++A+G NCV + + ++ LK + LVVYPNS
Sbjct: 207 SEHISDGTSLAEIAALFDNVQ--QVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPNS 264
Query: 303 GEH--ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
GE A E E L REW + A L C
Sbjct: 265 GEQWNAQAREWEGKRTEGSSLAEKTREWRDAGAGLIGGC 303
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 49/154 (31%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-TENIP-------------- 345
+G ILA ETIP+ E + + LL E+ + +AW F+ + +E+I
Sbjct: 166 AGVDILACETIPSKAETEAIIDLLTTEFASTEAWFGFTLRDSEHISDGTSLAEIAALFDN 225
Query: 346 --------------------------------LVVYPNSGERYDAVNARWI-DRDLCEPV 372
LVVYPNSGE+++A W R +
Sbjct: 226 VQQVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPNSGEQWNAQAREWEGKRTEGSSL 285
Query: 373 DKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ +W D G L+GGCCRT +D MK L+
Sbjct: 286 AEKTREWRDAGAGLIGGCCRTTPKDIGVMKQALE 319
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D +HIS+G S ++A N+ Q++A+G NCV + ++ LK + LVVYPN
Sbjct: 206 DSEHISDGTSLAEIAALFDNVQ--QVVALGFNCVPDDLSVAALKTLKPLVKRGTLVVYPN 263
Query: 568 SGERYD 573
SGE+++
Sbjct: 264 SGEQWN 269
>gi|18403505|ref|NP_566715.1| homocysteine S-methyltransferase 3 [Arabidopsis thaliana]
gi|50400551|sp|Q8LAX0.2|HMT3_ARATH RecName: Full=Homocysteine S-methyltransferase 3; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
3; Short=AtHMT-3; Short=SMM:Hcy S-methyltransferase 3
gi|9966515|gb|AAG10301.1|AF297394_1 homocysteine S-methyltransferase [Arabidopsis thaliana]
gi|9279692|dbj|BAB01249.1| cysteine methyltransferase [Arabidopsis thaliana]
gi|26451099|dbj|BAC42654.1| putative selenocysteine methyltransferase [Arabidopsis thaliana]
gi|28950917|gb|AAO63382.1| At3g22740 [Arabidopsis thaliana]
gi|332643151|gb|AEE76672.1| homocysteine S-methyltransferase 3 [Arabidopsis thaliana]
Length = 347
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 184/416 (44%), Gaps = 107/416 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L + DI D PLWS+ L T+ V + H D++++GA+I++T SYQA+I
Sbjct: 25 VVDGGFATELQRHGADIND--PLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L++ SV+ EA R+I
Sbjct: 83 QGFVA-KGLSVGEAENLLRRSVEITYEA----------------REIF------------ 113
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
+ T W +R IL+A SVG YGA L DGSEY G Y +
Sbjct: 114 -------------YNRCTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
VS+ T+ ++HR R+Q L ++GAD++A ETIP EA+ LL E AW SF+ K
Sbjct: 161 SVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSK 220
Query: 244 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
D + G+S + VA +C N ++A+G+NC P + +LI L+ P+VVY
Sbjct: 221 DGVSVPRGDSVVECAKVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVVY 275
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE YD +
Sbjct: 276 PNSGE--------------------------------------------------VYDGL 285
Query: 360 NARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
N +WI + D YV+ W D G +L GGCCRT + L D S S
Sbjct: 286 NKKWIKSEGESEEDFVSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDEPSAAS 341
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 522 QVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+VA +C N ++A+G+NC P + LI L+ P+VVYPNSGE YD
Sbjct: 236 KVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYD 283
>gi|398790663|ref|ZP_10551638.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. YR343]
gi|398218269|gb|EJN04780.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Pantoea sp. YR343]
Length = 311
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 174/394 (44%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGA + +T SYQA+
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLVENPELIYQVHHDYFAAGAHVAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV + R R D A +GS P
Sbjct: 75 QGFAA-RGLDEAQALALITQSVQLAQ----------RARDDYRAS----SGSTAP----- 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+AGSVGPYGA L +G+EYRGDY
Sbjct: 115 ---------------------------------LLVAGSVGPYGAFLANGAEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E M +HRPR+ AL+EAG D+LA ET+P+ EAQ L LL E+P AW SF+ +D
Sbjct: 140 LPEEQMKAFHRPRVTALLEAGVDLLACETLPSFAEAQALVSLLAEFPDSSAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HIS+G ++VA N P Q++A+G+NCV V+ + L+ + PL+VYPNSGE
Sbjct: 200 EHISDGTPLSKVAEL-VNAAP-QVVAIGINCVALESVTPALRSLQALCDKPLLVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ +W G L+GGCCRT +D
Sbjct: 268 SAPSGCTLHDKFA-EWQQAGARLIGGCCRTTPQD 300
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HIS+G ++VA N P Q++A+G+NCV V+P + L+ + PL+VYPNS
Sbjct: 198 DAEHISDGTPLSKVAEL-VNAAP-QVVAIGINCVALESVTPALRSLQALCDKPLLVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|157691021|ref|YP_001485483.1| homocysteine methyltransferase [Bacillus pumilus SAFR-032]
gi|157679779|gb|ABV60923.1| homocysteine S-methyltransferase [Bacillus pumilus SAFR-032]
Length = 312
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 176/396 (44%), Gaps = 112/396 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ +AGAD T SYQ +I
Sbjct: 15 ILDGALATELERKGCNLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + +L+K SV KEA RD+
Sbjct: 73 DGFAE-KGYSKEEAIELMKRSVTLAKEA----------------RDLF------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W + + +AGSVGP+GA L DGSEY+G+Y
Sbjct: 104 ---------------------WQDEASRNGRTKPFVAGSVGPFGAYLSDGSEYKGNY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
++E + ++HRPRIQALVEAGADILA ETIP EA + +LL+ E+ AW++FS KD
Sbjct: 141 LTEQALIDFHRPRIQALVEAGADILACETIPCLIEAIAIAKLLQDEFSGVSAWITFSAKD 200
Query: 245 DKHISNGESFTQVARTCYN-MNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
D HIS G+ + R C + P +Q+ AVGVNC P +SSLI+++K + P+VVYPN
Sbjct: 201 DLHISEGD----LLRECVQALEPYEQIAAVGVNCTPPQYISSLIQEMKKGTSKPIVVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 257 SGE--------------------------------------------------LYDPEDK 266
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + W +G ++GGCCRT ED
Sbjct: 267 VWSGDTPQHTFGECAHQWYQDGAHIIGGCCRTTPED 302
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYN-MNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYP 566
DD HIS G+ + R C + P +Q+ AVGVNC P +S LI+++K + P+VVYP
Sbjct: 200 DDLHISEGD----LLRECVQALEPYEQIAAVGVNCTPPQYISSLIQEMKKGTSKPIVVYP 255
Query: 567 NSGERYD 573
NSGE YD
Sbjct: 256 NSGELYD 262
>gi|227326966|ref|ZP_03830990.1| homocysteine methyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 315
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 162/341 (47%), Gaps = 62/341 (18%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFKAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF E S LI SV +A DD RD AG+
Sbjct: 71 QATPQGF-EARGYGEAESLALIAKSVQLAAQA-----------RDDYRRDNPQAGT---- 114
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+L+AGSVGPYGA L DGSEYRGD
Sbjct: 115 -------------------------------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
+D +H+S+G V + Q++AVG+NC+ V+ + L + ++PLVVYP
Sbjct: 196 LRDSEHLSDGTPLRTVLERVNACS--QVVAVGINCIALENVTPALTHLSSLTDLPLVVYP 253
Query: 301 NSGEHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
NSGE A+ A +A L L EW A L C
Sbjct: 254 NSGEQYDAVTKTWSSAHDDACSLTAYLPEWQAAGARLIGGC 294
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 61/145 (42%), Gaps = 49/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
+G +LA ET+P+ E + L LL E+P +AW SF+ +
Sbjct: 158 EAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFTLRDSEHLSDGTPLRTVLERVNA 217
Query: 341 -------------TENI-------------PLVVYPNSGERYDAVNARWIDR--DLCEPV 372
EN+ PLVVYPNSGE+YDAV W D C +
Sbjct: 218 CSQVVAVGINCIALENVTPALTHLSSLTDLPLVVYPNSGEQYDAVTKTWSSAHDDACS-L 276
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
Y+ +W G L+GGCCRT D
Sbjct: 277 TAYLPEWQAAGARLIGGCCRTTPAD 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V + Q++AVG+NC+ V+P + L + ++PLVVYPNS
Sbjct: 198 DSEHLSDGTPLRTVLERVNACS--QVVAVGINCIALENVTPALTHLSSLTDLPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|395228179|ref|ZP_10406503.1| CP4-6 prophage [Citrobacter sp. A1]
gi|424730676|ref|ZP_18159271.1| homocysteine s-methyltransferase [Citrobacter sp. L17]
gi|394718301|gb|EJF23938.1| CP4-6 prophage [Citrobacter sp. A1]
gi|422894869|gb|EKU34676.1| homocysteine s-methyltransferase [Citrobacter sp. L17]
Length = 310
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 174/401 (43%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF DLD S LI SV+ ++A
Sbjct: 76 AGFAA-RDLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E L LL +P +AW SF+ +D
Sbjct: 143 AEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V + Q++A+G+NC+ ++ ++ L + +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHSLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDAV+ W
Sbjct: 259 --------------------------------------------------QYDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + Y+ W G LVGGCCRT D +K R
Sbjct: 269 HHGEHCAHLADYLPQWQATGARLVGGCCRTTPADIAALKAR 309
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + ++ L + +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHSLTALPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|309790678|ref|ZP_07685229.1| homocysteine S-methyltransferase [Oscillochloris trichoides DG-6]
gi|308227272|gb|EFO80949.1| homocysteine S-methyltransferase [Oscillochloris trichoides DG6]
Length = 318
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 155/302 (51%), Gaps = 62/302 (20%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L D + + H D+ +AGAD +T SYQA+
Sbjct: 15 ILDGALATELERRGADLND--PLWSARLLLEEPDLIREVHADYFRAGADCAITASYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAI-ALEATHARIRSDDPARDILIAGSVGPYGAS 124
GF L + ++ +L++ SV +A A+ AT R P
Sbjct: 73 PGFAR-RGLGHQAASELMRRSVRLACDARDAVWATLDHTRRPHP---------------- 115
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
L+A S+GPYGA L DGSEYRGDY
Sbjct: 116 -----------------------------------LVAASIGPYGAFLHDGSEYRGDYT- 139
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+S+A + +HRPR+ L +AGAD+LA+ETIP+ +EAQ+L RLL E+P AW+SFS +D
Sbjct: 140 -ISDADLLAFHRPRMAVLSDAGADLLALETIPSFREAQLLLRLLEEFPQTWAWMSFSARD 198
Query: 245 DKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
+HIS+G F T VA + Q+ AVGVNC P V+ L+ + PL+ YPNS
Sbjct: 199 GQHISDGTPFATCVAEIAQH---PQVAAVGVNCTAPGYVAELLRVARDLTTKPLLAYPNS 255
Query: 303 GE 304
GE
Sbjct: 256 GE 257
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 58/144 (40%), Gaps = 46/144 (31%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS---------------CK 340
+ V ++G +LA+ETIP+ +EAQ+L RLL E+P AW+SFS C
Sbjct: 153 MAVLSDAGADLLALETIPSFREAQLLLRLLEEFPQTWAWMSFSARDGQHISDGTPFATCV 212
Query: 341 TE-------------------------------NIPLVVYPNSGERYDAVNARWIDRDLC 369
E PL+ YPNSGE YD W
Sbjct: 213 AEIAQHPQVAAVGVNCTAPGYVAELLRVARDLTTKPLLAYPNSGEIYDPATHAWCGIASV 272
Query: 370 EPVDKYVTDWLDEGVALVGGCCRT 393
W EG +++GGCCRT
Sbjct: 273 GDYAAEAQKWYAEGASILGGCCRT 296
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPN 567
D +HIS+G F T VA + Q+ AVGVNC P V+ L+ + PL+ YPN
Sbjct: 198 DGQHISDGTPFATCVAEIAQH---PQVAAVGVNCTAPGYVAELLRVARDLTTKPLLAYPN 254
Query: 568 SGERYD 573
SGE YD
Sbjct: 255 SGEIYD 260
>gi|390940140|ref|YP_006403877.1| homocysteine/selenocysteine methylase [Sulfurospirillum barnesii
SES-3]
gi|390193247|gb|AFL68302.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Sulfurospirillum
barnesii SES-3]
Length = 311
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 175/400 (43%), Gaps = 107/400 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DG F ++L DI D LWS+ FL +A+ + H D++ AG+D + T SYQ
Sbjct: 12 KVFILDGAFGTELERKGYDINDS--LWSAKFLMEKPEAIAEVHLDYLNAGSDCITTASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GFM+ + + LI SSV + ++R D
Sbjct: 70 ASFEGFMK-RGMSEAEAKALIVSSVKIAQ----------KVRDD---------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ D HV RL L+A S+GPYGA L DGSE+RG+Y
Sbjct: 103 --------FWSDTKNHV--------KRL-------KPLVAASIGPYGAYLADGSEFRGNY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S + +HR R+ L+EA D+LA ETIP EA+ LC LL +P AW+SFS
Sbjct: 140 --GLSMEALMNFHRKRLLTLIEAKPDLLACETIPCLVEAKALCALLEGYPAVSAWVSFSA 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD +HI++GE + A+ + + Q++A+G+NC P + SLI+++K + P++VYPN
Sbjct: 198 KDGEHINSGEKVRECAQ--FLESQKQIVAIGINCTAPQFIESLIDEIKAVSSKPIIVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G Y+A+
Sbjct: 256 GGSS--------------------------------------------------YNALTK 265
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W K W +G L+GGCC+T ED +
Sbjct: 266 TWDGLSKNASYGKMAYGWYQKGARLIGGCCQTTPEDIAQI 305
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +HI++GE + A+ + + Q++A+G+NC P + LI+++K + P++VYPN
Sbjct: 199 DGEHINSGEKVRECAQ--FLESQKQIVAIGINCTAPQFIESLIDEIKAVSSKPIIVYPNG 256
Query: 569 GERYD 573
G Y+
Sbjct: 257 GSSYN 261
>gi|350264480|ref|YP_004875787.1| homocysteine S-methyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349597367|gb|AEP85155.1| homocysteine S-methyltransferase [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 296
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 165/388 (42%), Gaps = 109/388 (28%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS+ L D + Q H D+ AGAD +T SYQ++ GF L + +LI+ SV
Sbjct: 16 LWSAKILMEEPDLIKQVHTDYFAAGADCAITASYQSTFEGFAA-RGLSEAKARRLIEMSV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
EA RD A E
Sbjct: 75 SIAAEA----------------RDEFWA-----------------------------LEE 89
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+RL P +IA S+GPYGA L DGSEYRG Y +SE + E+HRPR++AL+EAGA
Sbjct: 90 NRLNRPKP----IIAASIGPYGAYLADGSEYRGHY--GISEDELVEFHRPRMKALIEAGA 143
Query: 208 DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD 267
D+LA ETIP EA+ + RLL+E+P AW+SFS KD HIS+G A +
Sbjct: 144 DVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPAAGCAS--WLDEHR 201
Query: 268 QLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR 326
Q+ A+G+NC + SLIE+LK + P++ YPNSGE
Sbjct: 202 QIAALGINCTPLQHIPSLIEELKKHTSKPIIAYPNSGE---------------------- 239
Query: 327 EWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVAL 386
+YD W EP + W ++G L
Sbjct: 240 ----------------------------QYDPETKTWNGAACAEPYGQSARMWHEKGAKL 271
Query: 387 VGGCCRTYAEDTLHMKHRLDDWVSGLST 414
+GGCCRT ED + W L T
Sbjct: 272 IGGCCRTKPEDI----KEIAAWARSLKT 295
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++ YPNS
Sbjct: 180 DGLHISDGTPAAGCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKHTSKPIIAYPNS 237
Query: 569 GERYD 573
GE+YD
Sbjct: 238 GEQYD 242
>gi|386596853|ref|YP_006093253.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|387620023|ref|YP_006127650.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|260450542|gb|ACX40964.1| homocysteine S-methyltransferase [Escherichia coli DH1]
gi|315134946|dbj|BAJ42105.1| homocysteine S-methyltransferase [Escherichia coli DH1]
Length = 310
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 174/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +A A +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAEAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|50121721|ref|YP_050888.1| homocysteine methyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|49612247|emb|CAG75697.1| homocysteine S-methyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 311
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 161/341 (47%), Gaps = 62/341 (18%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ KAGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHFDYFKAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF E S LI SV +A DD RD AG+
Sbjct: 71 QATPQGF-EARGYSEAESLALIAKSVQLAAQA-----------RDDYRRDNTQAGT---- 114
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+L+AGSVGPYGA L DGSEYRGD
Sbjct: 115 -------------------------------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQADMMAFHRPRIAALHEAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
+D +H+S+G V + Q++AVG+NC+ V+ + L + ++PLVVYP
Sbjct: 196 LRDSEHLSDGTPLRTVLERVNACS--QVVAVGLNCIALEKVTPALMHLSSLTDLPLVVYP 253
Query: 301 NSGEHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
NSGE A+ A A L L EW A L C
Sbjct: 254 NSGEQYDAVTKTWSSAHDTACSLTAYLPEWQTAGARLIGGC 294
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 47/144 (32%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
+G +LA ET+P+ E + L LL E+P +AW SF+ +
Sbjct: 158 EAGADLLACETLPSFAEIEALIALLAEFPQAQAWFSFTLRDSEHLSDGTPLRTVLERVNA 217
Query: 341 --------------------------TENIPLVVYPNSGERYDAVNARWID-RDLCEPVD 373
++PLVVYPNSGE+YDAV W D +
Sbjct: 218 CSQVVAVGLNCIALEKVTPALMHLSSLTDLPLVVYPNSGEQYDAVTKTWSSAHDTACSLT 277
Query: 374 KYVTDWLDEGVALVGGCCRTYAED 397
Y+ +W G L+GGCCRT D
Sbjct: 278 AYLPEWQTAGARLIGGCCRTTPAD 301
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V + Q++AVG+NC+ V+P + L + ++PLVVYPNS
Sbjct: 198 DSEHLSDGTPLRTVLERVNACS--QVVAVGLNCIALEKVTPALMHLSSLTDLPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|260596729|ref|YP_003209300.1| homocysteine methyltransferase [Cronobacter turicensis z3032]
gi|260215906|emb|CBA28467.1| Homocysteine S-methyltransferase [Cronobacter turicensis z3032]
Length = 310
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 175/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A +A A + A GP
Sbjct: 76 AGFAAR-GLDEAQSRALIARSVE-----LARQAREAFYKEQPDA---------GP----- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+AGSVGPYGA L DGSEYRGDY
Sbjct: 116 ---------------------------------LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+ AG D+LA ET+P+ EA+ L LL +P +AWL+F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAVLLESYPQARAWLTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + L +PLVVYPNSG
Sbjct: 201 GHISDGTPLADVAAA---LAPYPQIVALGINCVALEKTTAALAHLHDATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W R+D
Sbjct: 258 EQYDAVS---------------------KTW--------------------RHDG----- 271
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C+ + Y+ +W G AL+GGCCRT D
Sbjct: 272 ---HACQTLAHYLDEWRAAGAALIGGCCRTTPAD 302
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + L +PLVVYPN
Sbjct: 199 DSGHISDGTPLADVAAA---LAPYPQIVALGINCVALEKTTAALAHLHDATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|297835280|ref|XP_002885522.1| homocysteine S-methyltransferase 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297331362|gb|EFH61781.1| homocysteine S-methyltransferase 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 178/393 (45%), Gaps = 101/393 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L + DI D PLWS+ L T+ V + H D++++GA+I++T SYQA+I
Sbjct: 25 VVDGGFATELQRHGADIND--PLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + L++ SV+ EA R+I
Sbjct: 83 QGFVA-KGLSVEEAENLLRRSVEITYEA----------------REIF------------ 113
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
+ T W +R IL+A SVG YGA L DGSEY G Y +
Sbjct: 114 -------------YNRCTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCK 243
VS+ T+ ++HR R+Q L +GAD +A ETIP EA+ LL E + AW SF+ K
Sbjct: 161 SVSKETLKDFHRRRVQILANSGADFIAFETIPNKLEAEAYADLLEEEDINIPAWFSFTSK 220
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D + G+S + A+ + +++A+G+NC P + LI L+ P+VVYPNS
Sbjct: 221 DGVTVPRGDSVVECAKVADSCK--KVVAIGINCTAPRYIHDLIISLRQVTRKPIVVYPNS 278
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YD +N +
Sbjct: 279 GEI--------------------------------------------------YDGLNKK 288
Query: 363 WI--DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
WI + + E YV+ W D G +L GGCCRT
Sbjct: 289 WIRSEGESEEDFVSYVSKWRDAGASLFGGCCRT 321
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D + G+S + A+ + +++A+G+NC P + LI L+ P+VVYPNS
Sbjct: 221 DGVTVPRGDSVVECAKVADSCK--KVVAIGINCTAPRYIHDLIISLRQVTRKPIVVYPNS 278
Query: 569 GERYD 573
GE YD
Sbjct: 279 GEIYD 283
>gi|386822801|ref|ZP_10109997.1| homocysteine methyltransferase [Serratia plymuthica PRI-2C]
gi|386380275|gb|EIJ21016.1| homocysteine methyltransferase [Serratia plymuthica PRI-2C]
Length = 312
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 183/405 (45%), Gaps = 110/405 (27%)
Query: 2 ANVKLI-DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
AN LI DG +++L D+ D PLWS+ L + + Q H D+ AGA +T S
Sbjct: 13 ANRTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITAS 70
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF L+ S LI SV ++A
Sbjct: 71 YQATPLGFQRR-GLNQQQSLALIAKSVQLAQQA--------------------------- 102
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R DY+ +A +LIAGSVGPYGA L DGSEYRG
Sbjct: 103 -----------RSDYLAQHPQAA--------------PLLIAGSVGPYGAYLADGSEYRG 137
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + + M +HRPRI AL EAG D+LA ET+P+ E Q L LL+E+P AW +F
Sbjct: 138 DY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALLALLQEFPTLGAWFAF 195
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +D +H+S+G TQV + NP Q++A+G+NC+ V+ + QL T + PL+VY
Sbjct: 196 TLRDSQHLSDGTPLTQVLAALHG-NP-QVLAIGINCIALENVTPALRQLATLTDKPLLVY 253
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGEH A+ K W +C +E+ L+
Sbjct: 254 PNSGEHYDAVT---------------------KTW--HACGSESGSLI------------ 278
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ + +W + G L+GGCCRT +D + R
Sbjct: 279 --------------EQIGEWQNVGARLIGGCCRTTPQDIRQIAAR 309
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G TQV + NP Q++A+G+NC+ V+P + QL T + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTQVLAALHG-NP-QVLAIGINCIALENVTPALRQLATLTDKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|224285542|gb|ACN40491.1| unknown [Picea sitchensis]
Length = 348
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 181/400 (45%), Gaps = 104/400 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ +IDGG ++QL ++ D+ D PLWS L + + + H+++++AGA+I++T S
Sbjct: 19 VGGFGVIDGGLATQLESHGADLND--PLWSGRCLIESPHLIQKVHQEYLEAGAEIIITAS 76
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+I GF E L L++ SV+ IA EA RD
Sbjct: 77 YQATIQGF-ESRGLSITEGEALLRRSVE-----IACEA-----------RDQFWKKCAES 119
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
S+ D + R IL+A SVG YGA L DGSEY G
Sbjct: 120 LNGSVDDAQIPK-----------------------VRPILVAASVGSYGAYLADGSEYSG 156
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLS 239
DY ++ T+ ++HR R+Q L ++GAD+LA ETIP EAQ LL E Q AW S
Sbjct: 157 DYGPGMTVHTLKDFHRGRVQVLADSGADLLAFETIPNKLEAQAYIELLEENDIQIPAWFS 216
Query: 240 FSCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIP 295
F+ KD ++ +G+SFT+ +A +C N ++AVG+NC P + LI + K P
Sbjct: 217 FNSKDGVNVVSGDSFTECAALADSCTN-----VVAVGINCTPPRFIHGLILSIQKVTAKP 271
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
++VYPNSGE
Sbjct: 272 ILVYPNSGE--------------------------------------------------T 281
Query: 356 YDAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
YDA +W+ VD YV W + G +L+GGCCRT
Sbjct: 282 YDADRKQWVASTGVSDVDFVSYVQKWQEIGASLIGGCCRT 321
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D ++ +G+SFT+ +A +C N+ +AVG+NC P + LI + K P++VY
Sbjct: 221 DGVNVVSGDSFTECAALADSCTNV-----VAVGINCTPPRFIHGLILSIQKVTAKPILVY 275
Query: 566 PNSGERYDFHLADEKNNCVKSDVT 589
PNSGE YD AD K + V+
Sbjct: 276 PNSGETYD---ADRKQWVASTGVS 296
>gi|389842023|ref|YP_006344107.1| homocysteine methyltransferase [Cronobacter sakazakii ES15]
gi|387852499|gb|AFK00597.1| homocysteine methyltransferase [Cronobacter sakazakii ES15]
Length = 310
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 178/400 (44%), Gaps = 113/400 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + +L + +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E +YDAV+ W
Sbjct: 258 E--------------------------------------------------QYDAVSKTW 267
Query: 364 I-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
D C+ + Y+ W G AL+GGCCRT D ++
Sbjct: 268 RHDGHACQTLAHYLDAWRAAGAALIGGCCRTTPADIAALR 307
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + +L + +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|418034678|ref|ZP_12673148.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351468603|gb|EHA28819.1| homocysteine methyltransferase [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 296
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 174/388 (44%), Gaps = 109/388 (28%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS+ L + + Q H D+ AGAD +T SYQ++ GF L + +LI+ SV
Sbjct: 16 LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEGFAA-RGLSEAEARRLIELSV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
EA RD SL++
Sbjct: 75 SIAAEA----------------RDEFW---------SLKE-------------------- 89
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+RL P +IA S+GPYGA L DGSEYRG+Y +SE + E+HRPR++AL+EAGA
Sbjct: 90 NRLNRPKP----IIAASIGPYGAYLADGSEYRGNYA--ISEDELIEFHRPRMKALIEAGA 143
Query: 208 DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD 267
D+LA ETIP EA+ + RLL+E+P AW+SFS KD HIS+G + A +
Sbjct: 144 DVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPASDCAS--WLDEHR 201
Query: 268 QLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR 326
Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 202 QIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGEQYD------------------- 242
Query: 327 EWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVAL 386
P K W +C E Y A +AR W ++G L
Sbjct: 243 --PETKTWNGAAC-------------AESYGA-SAR---------------TWHEKGARL 271
Query: 387 VGGCCRTYAEDTLHMKHRLDDWVSGLST 414
+GGCCRT ED + W L T
Sbjct: 272 IGGCCRTKPEDI----QEIAAWARSLKT 295
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 180 DGLHISDGTPASDCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 237
Query: 569 GERYD 573
GE+YD
Sbjct: 238 GEQYD 242
>gi|420369891|ref|ZP_14870538.1| homocysteine S-methyltransferase [Shigella flexneri 1235-66]
gi|391320804|gb|EIQ77605.1| homocysteine S-methyltransferase [Shigella flexneri 1235-66]
Length = 310
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 169/394 (42%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAAR-GLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E L LL +P +AW SF+ +D
Sbjct: 143 AEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
+H+S+G V + Q++A+G+NC+ ++ ++ L +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YD+V W
Sbjct: 259 H--------------------------------------------------YDSVTKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C + Y+ WL G L+GGCCRT +D
Sbjct: 269 HHGKACATLAGYLPQWLAAGAKLIGGCCRTTPQD 302
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|238794214|ref|ZP_04637829.1| Homocysteine S-methyltransferase [Yersinia intermedia ATCC 29909]
gi|238726504|gb|EEQ18043.1| Homocysteine S-methyltransferase [Yersinia intermedia ATCC 29909]
Length = 296
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 175/393 (44%), Gaps = 109/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 2 ILDGALATELEARGCDLSD--PLWSAKVLIEDPELIYQVHLDYFNAGAQCAITASYQATP 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF++ LD S +LI SV ++A
Sbjct: 60 QGFLQ-RGLDQQQSLELITKSVQLAQQA-------------------------------- 86
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ +A +LIAGSVGPYGA L DGSEYRG+Y
Sbjct: 87 ------RKDFLNQHPQA--------------EPLLIAGSVGPYGAYLADGSEYRGNY--R 124
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ + M +HRPRI AL EAG D+LA ET+P+ E Q L LL+E+P W +F+ +D+
Sbjct: 125 LPQDEMIAFHRPRIAALAEAGVDLLACETLPSFHELQALLTLLQEFPTLGGWFAFTLRDN 184
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G V Q++A+G+NC+ V+ ++Q + PL+VYPNSGE
Sbjct: 185 QHLSDGTPLKDVLALLRGNQ--QVLAIGINCIALENVTPALQQFTALADKPLLVYPNSGE 242
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H A+ K W +C E+ L+
Sbjct: 243 HYDAVS---------------------KTW--HACGGEHNHLI----------------- 262
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL V +W G L+GGCCRT +D
Sbjct: 263 --DL-------VGEWQRLGARLIGGCCRTTPKD 286
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D++H+S+G V Q++A+G+NC+ V+P ++Q + PL+VYPNS
Sbjct: 183 DNQHLSDGTPLKDVLALLRGNQ--QVLAIGINCIALENVTPALQQFTALADKPLLVYPNS 240
Query: 569 GERYD 573
GE YD
Sbjct: 241 GEHYD 245
>gi|21593147|gb|AAM65096.1| putative selenocysteine methyltransferase [Arabidopsis thaliana]
Length = 347
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 185/417 (44%), Gaps = 107/417 (25%)
Query: 5 KLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
+++DGGF+++L + DI D P+WS+ L T+ V + H D++++GA+I++T SYQA+
Sbjct: 24 EVVDGGFATELQRHGADIND--PIWSAKCLITSPHLVTKVHLDYLESGANIIITASYQAT 81
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
I GF+ L + L++ SV+ EA R+I
Sbjct: 82 IQGFVA-KGLSVGEAENLLRRSVEITYEA----------------REIF----------- 113
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYV 183
+ T W +R IL+A SVG YGA L DGSEY G Y
Sbjct: 114 --------------YNRWTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYG 159
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
+ VS+ T+ ++HR R+Q L ++GAD++A ETIP EA+ LL E AW SF+
Sbjct: 160 DSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTS 219
Query: 243 KDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVV 298
KD + G+S + VA +C N ++A+G+NC P + +LI L+ P+VV
Sbjct: 220 KDGVSVPRGDSVVECAKVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVV 274
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE YD
Sbjct: 275 YPNSGE--------------------------------------------------VYDG 284
Query: 359 VNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
+N +WI + D YV+ W D G +L GGCCRT + L D S S
Sbjct: 285 LNKKWIKSEGESEEDFVSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDEPSAAS 341
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 522 QVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+VA +C N ++A+G+NC P + LI L+ P+VVYPNSGE YD
Sbjct: 236 KVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYD 283
>gi|356572212|ref|XP_003554264.1| PREDICTED: selenocysteine methyltransferase-like [Glycine max]
Length = 333
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 189/405 (46%), Gaps = 94/405 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+IDGG +++L + D+ D PLWS+ L + + Q H D+++ GADI++T SY
Sbjct: 13 GGTAVIDGGLATELERHGADLND--PLWSAKCLFSFPHLIRQVHLDYLENGADIIITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF D +S L++SSV+ +EA R++ G
Sbjct: 71 QATIQGFKAKGYSDEESE-ALLRSSVEIAREA----------------REVYYKNCAG-- 111
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
R G GD + R++ P IL+A SVG YGA L DGSEY GD
Sbjct: 112 ---CRSGD---GD-----------DDGRILKQRP---ILVAASVGSYGAYLADGSEYSGD 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + ++ T+ ++HR R+Q L ++GAD+LA ET+P EA+ +LL E + AW SF
Sbjct: 152 YGDAITVETLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAQLLEEEDIKIPAWFSF 211
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ KD ++ +G+S + + N +++AVG+NC P + LI L K P+V+Y
Sbjct: 212 NSKDGVNVVSGDSLMECGSIAESCN--KVVAVGINCTPPRFIHGLIVLLKKVTTKPIVIY 269
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSG ET A L+EW
Sbjct: 270 PNSG------ETYDAD---------LKEWVQ----------------------------- 285
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
N D D YV W + G +LVGGCCRT DT+ +R
Sbjct: 286 NTGVTDEDFI----SYVNKWCELGASLVGGCCRT-TPDTIRKIYR 325
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D ++ +G+S + + N +++AVG+NC P + LI LK P+V+YPNS
Sbjct: 215 DGVNVVSGDSLMECGSIAESCN--KVVAVGINCTPPRFIHGLIVLLKKVTTKPIVIYPNS 272
Query: 569 GERYDFHLADEKNNCVKSD 587
GE YD L + N +D
Sbjct: 273 GETYDADLKEWVQNTGVTD 291
>gi|384173890|ref|YP_005555275.1| homocysteine S-methyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349593114|gb|AEP89301.1| homocysteine S-methyltransferase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 296
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 171/388 (44%), Gaps = 109/388 (28%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS+ L + + Q H D+ AGAD +T SYQ++ GF L + +LI+ SV
Sbjct: 16 LWSAKILMEEPNLIKQVHTDYFAAGADCAITASYQSTFEGFAA-RGLSEAEARRLIELSV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
EA RD E E
Sbjct: 75 SIAAEA--------------------------------RD-------------EFWSLEE 89
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+RL P +IA SVGPYGA L DGSEYRG+Y +SE + E+HRPR++AL+EAGA
Sbjct: 90 NRLNRPKP----IIAASVGPYGAYLADGSEYRGNY--GISEDELIEFHRPRMKALIEAGA 143
Query: 208 DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD 267
D+LA ETIP EA+ + RLL+E+P AW+SFS KD HIS+G A +
Sbjct: 144 DVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPAADCAS--WLDEHR 201
Query: 268 QLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR 326
Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 202 QIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGEQYD------------------- 242
Query: 327 EWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVAL 386
P K W +C E Y A +AR W ++G L
Sbjct: 243 --PETKTWNGAAC-------------AESYGA-SAR---------------TWHEKGARL 271
Query: 387 VGGCCRTYAEDTLHMKHRLDDWVSGLST 414
+GGCCRT ED + W L T
Sbjct: 272 IGGCCRTKPEDI----QEIAAWARSLKT 295
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 180 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 237
Query: 569 GERYD 573
GE+YD
Sbjct: 238 GEQYD 242
>gi|169625027|ref|XP_001805918.1| hypothetical protein SNOG_15780 [Phaeosphaeria nodorum SN15]
gi|111055755|gb|EAT76875.1| hypothetical protein SNOG_15780 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 177/339 (52%), Gaps = 51/339 (15%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
LIDG ++ L ++G I G LWS+ L + D + +TH D+ +AGA+I +T SYQASI
Sbjct: 19 LIDGALATYLE-HLGADISGS-LWSASILLSRPDLIKKTHLDYYRAGANIAITASYQASI 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L L + + ++K SV +A+EA ++S L
Sbjct: 77 PGLVKHLGLGENEAKDVVKKSVQ-----LAIEARDEYVQS------------------KL 113
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ E V A++ E D+ +AGSVGPYGA L DGSEYRGDY
Sbjct: 114 EESCE------RSVDAASLRE-----------DLFVAGSVGPYGAYLSDGSEYRGDY--D 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
V+ M ++HR R+QALV+AG D+LA ETIP+ +E + L LL+ E+ +AW +F+ +D
Sbjct: 155 VAHEAMKDFHRGRVQALVDAGVDVLACETIPSRRETEALLDLLQSEFRDAEAWFTFTLRD 214
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
+HI++G S +A +Q++ +G NCV + + ++ LK + +VVYPNS
Sbjct: 215 AEHIADGTSLVDIA--ALFETAEQVVGLGFNCVPDDLALAALKNLKPLVKRGTMVVYPNS 272
Query: 303 GE--HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
GE + A E + E + L EW A L C
Sbjct: 273 GEQWNAKAREWEGSRTEGEGLASKTVEWERAGAGLIGGC 311
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 49/142 (34%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAW------------------------- 334
++G +LA ETIP+ +E + L LL+ E+ + +AW
Sbjct: 173 DAGVDVLACETIPSRRETEALLDLLQSEFRDAEAWFTFTLRDAEHIADGTSLVDIAALFE 232
Query: 335 -------LSFSCKTENIPL---------------VVYPNSGERYDAVNARWI-DRDLCEP 371
L F+C +++ L VVYPNSGE+++A W R E
Sbjct: 233 TAEQVVGLGFNCVPDDLALAALKNLKPLVKRGTMVVYPNSGEQWNAKAREWEGSRTEGEG 292
Query: 372 VDKYVTDWLDEGVALVGGCCRT 393
+ +W G L+GGCCRT
Sbjct: 293 LASKTVEWERAGAGLIGGCCRT 314
>gi|421784846|ref|ZP_16221282.1| homocysteine S-methyltransferase [Serratia plymuthica A30]
gi|407753030|gb|EKF63177.1| homocysteine S-methyltransferase [Serratia plymuthica A30]
Length = 312
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 182/405 (44%), Gaps = 110/405 (27%)
Query: 2 ANVKLI-DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
AN LI DG +++L D+ D PLWS+ L + + Q H D+ AGA +T S
Sbjct: 13 ANRTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITAS 70
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF+ L+ S LI SV ++A
Sbjct: 71 YQATPLGFLRR-GLNQQQSLALIAKSVQLAQQA--------------------------- 102
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R DY+ +A +LIAGSVGPYGA L DGSEYRG
Sbjct: 103 -----------RSDYLAQHPQAA--------------PLLIAGSVGPYGAYLADGSEYRG 137
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + + M +HRPRI AL EAG D+LA ET+P+ E Q L LL+E+P AW +F
Sbjct: 138 DY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALLALLQEFPTLGAWFAF 195
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +D +H+S+G TQV NP Q++A+G+NC+ V+ + QL T + PL+VY
Sbjct: 196 TLRDSQHLSDGTPLTQV-LAALRGNP-QVLAIGINCIALENVTPALRQLATLTDKPLLVY 253
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGEH A+ K W +C E+ L+
Sbjct: 254 PNSGEHYDAVT---------------------KTW--HACGGESGSLI------------ 278
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ + +W + G L+GGCCRT +D + R
Sbjct: 279 --------------EQIGEWQNIGARLIGGCCRTTPQDIRQIAAR 309
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G TQV NP Q++A+G+NC+ V+P + QL T + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTQV-LAALRGNP-QVLAIGINCIALENVTPALRQLATLTDKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|261822177|ref|YP_003260283.1| homocysteine methyltransferase [Pectobacterium wasabiae WPP163]
gi|261606190|gb|ACX88676.1| homocysteine S-methyltransferase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 162/341 (47%), Gaps = 62/341 (18%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A+ ++DG +++L D+ D PLWS+ L + Q H D+ AGA +T SY
Sbjct: 13 ASTIVLDGALATELEARGCDLTD--PLWSAKVLVENPALIYQVHLDYFNAGAQCAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF AR A S+
Sbjct: 71 QATPQGFK---------------------------------------ARGYSEAESLTLI 91
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
S++ ++ R DY S+A + +L+AGSVGPYGA L DGSEYRGD
Sbjct: 92 AKSVQLAAQARDDYRRDNSQAGV--------------LLVAGSVGPYGAYLADGSEYRGD 137
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y + +A M +HRPRI AL EAGAD+LA ET+P+ E + L LL E+P +AW SF+
Sbjct: 138 Y--QLPQAEMMAFHRPRIAALHEAGADLLACETLPSFAEVEALIALLAEFPQAQAWFSFT 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYP 300
+D +H+S+G V N P Q++AVG+NC+ V+ + L N+PLVVYP
Sbjct: 196 LRDSEHLSDGTPLHTVLER-VNACP-QVVAVGINCIALENVTPALTYLSLLTNLPLVVYP 253
Query: 301 NSGEHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
NSGE A+ A A L L EW A L C
Sbjct: 254 NSGEQYDAVTKTWSSAHDAACSLAAYLPEWQAAGARLIGGC 294
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 59/143 (41%), Gaps = 47/143 (32%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK--------------------- 340
+G +LA ET+P+ E + L LL E+P +AW SF+ +
Sbjct: 159 AGADLLACETLPSFAEVEALIALLAEFPQAQAWFSFTLRDSEHLSDGTPLHTVLERVNAC 218
Query: 341 -------------------------TENIPLVVYPNSGERYDAVNARWID-RDLCEPVDK 374
N+PLVVYPNSGE+YDAV W D +
Sbjct: 219 PQVVAVGINCIALENVTPALTYLSLLTNLPLVVYPNSGEQYDAVTKTWSSAHDAACSLAA 278
Query: 375 YVTDWLDEGVALVGGCCRTYAED 397
Y+ +W G L+GGCCRT D
Sbjct: 279 YLPEWQAAGARLIGGCCRTTPAD 301
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G V N P Q++AVG+NC+ V+P + L N+PLVVYPNS
Sbjct: 198 DSEHLSDGTPLHTVLER-VNACP-QVVAVGINCIALENVTPALTYLSLLTNLPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|422882217|ref|ZP_16928673.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK355]
gi|332360758|gb|EGJ38566.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK355]
Length = 315
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 178/408 (43%), Gaps = 109/408 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESLGYDV--SGKLWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++AI
Sbjct: 71 SISAFIE-AGLTPEKGYDLLKETVFLAQKAI----------------------------- 100
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
E+V W L ++ + LIAGSVGPY A L DGSEY GD
Sbjct: 101 -------------ENV-------WQELSPEEQKQRPYPLIAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE E+HRPRIQAL+E G D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE L + + P QK L EN L
Sbjct: 257 PNSGETY------------NGLTKTWHDDPEQKRSL-----LENSKL------------- 286
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W ++GV L GGCCRT ED + D
Sbjct: 287 -------------------WQEQGVQLFGGCCRTRPEDIAQLGKGFKD 315
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTYPNSGETYN 264
>gi|365104866|ref|ZP_09334258.1| homocysteine S-methyltransferase [Citrobacter freundii 4_7_47CFAA]
gi|363643807|gb|EHL83111.1| homocysteine S-methyltransferase [Citrobacter freundii 4_7_47CFAA]
Length = 310
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 173/404 (42%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R Y+ +A M +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ---------REAYLAENPQAGM--------------LLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFAEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPN 301
D +H+S+G V Q++A+G+NC+ ++ ++ L +PLVVYPN
Sbjct: 198 CDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE +YDAV+
Sbjct: 256 SGE--------------------------------------------------QYDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|255552095|ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223543727|gb|EEF45255.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 348
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 183/395 (46%), Gaps = 105/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF+++L + D+ D PLWS+ L ++ V + H D+I AGA+I++T SYQA+I
Sbjct: 25 VIDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYIDAGANIILTASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L + + QL++ SV+ IA EA R+I
Sbjct: 83 QGF-EAKGLSTEEAEQLLRRSVE-----IACEA-----------REI------------- 112
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
+ T W + +R +L+A S+G YGA L DGSEY GDY +
Sbjct: 113 ------------YYDNCTKGSWDLMEDGKMSRHPVLVAASIGSYGAYLADGSEYSGDYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCK 243
VS T+ ++HR R+Q L ++GAD++A ETIP EA+ LL E + AW SF+ K
Sbjct: 161 AVSIQTLKDFHRRRLQILAKSGADLIAFETIPNKLEAKAYAELLEEEGINIPAWFSFNSK 220
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D ++ +G+S + A + Q++AVG+NC P + LI ++ + P+V+YPNS
Sbjct: 221 DGINVVSGDSILECASIA--DSSKQVVAVGINCTPPRFIHGLILSMREATSKPIVIYPNS 278
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YDA +
Sbjct: 279 GE--------------------------------------------------TYDAALKQ 288
Query: 363 WIDRDLCEPVDK----YVTDWLDEGVALVGGCCRT 393
W+ C D+ Y+ W + G +L GGCCRT
Sbjct: 289 WVKS--CGASDEDFVSYIGKWREAGASLFGGCCRT 321
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D ++ +G+S + A + Q++AVG+NC P + LI ++ + P+V+YPNS
Sbjct: 221 DGINVVSGDSILECASIA--DSSKQVVAVGINCTPPRFIHGLILSMREATSKPIVIYPNS 278
Query: 569 GERYDFHLADEKNNCVKSD 587
GE YD L +C SD
Sbjct: 279 GETYDAALKQWVKSCGASD 297
>gi|15230929|ref|NP_189219.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|50400681|sp|Q9SDL7.1|HMT1_ARATH RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=AtHMT-1; Short=SMM:Hcy S-methyltransferase 1
gi|6685161|gb|AAF23821.1|AF219222_1 homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|9279594|dbj|BAB01052.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|17473823|gb|AAL38339.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|20148551|gb|AAM10166.1| homocysteine S-methyltransferase AtHMT-1 [Arabidopsis thaliana]
gi|332643566|gb|AEE77087.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 326
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 174/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGADIV+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV+ EA
Sbjct: 80 PGFLS-RGLSIEESESLLQKSVELAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + E VS+ + ++R L+A S+G YGA L DGSEY G Y E+
Sbjct: 107 ------RDRFWEKVSKVSGHSYNR---------ALVAASIGSYGAYLADGSEYSGHYGEN 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ +GESF + N + AVG+NC P + +LI + K +VVYPNSG
Sbjct: 212 GEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRKFAKLTKKAIVVYPNSG 269
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C ++
Sbjct: 270 EV----------------------WDGKAKQWLPSQCFGDD------------------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + T W D G L+GGCCRT
Sbjct: 289 --------EFEMFATKWRDLGAKLIGGCCRT 311
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D + +GESF + N + AVG+NC P + LI + K +VVYPNS
Sbjct: 211 DGEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRKFAKLTKKAIVVYPNS 268
Query: 569 GERYD 573
GE +D
Sbjct: 269 GEVWD 273
>gi|322385238|ref|ZP_08058885.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|417921927|ref|ZP_12565417.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|321270862|gb|EFX53775.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
gi|342833812|gb|EGU68092.1| homocysteine S-methyltransferase [Streptococcus cristatus ATCC
51100]
Length = 314
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 181/409 (44%), Gaps = 114/409 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DG ++L D+ LWS+ +L + H D+++A +DI+ T+SYQ
Sbjct: 12 EIIILDGALGTELERQGYDV--SGRLWSAKYLLENPQIIQGLHEDYVRASSDIITTSSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI F+E L D +Y+L K +V + A
Sbjct: 70 ASIPAFVEE-GLSLDKAYELFKETVFLAQAA----------------------------- 99
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI-LIAGSVGPYGASLRDGSEYRGD 181
V++V W L D+ R LIAGSVGPY A L DGSEY G
Sbjct: 100 -------------VKNV-------WQGLSLDEQQRSYPLIAGSVGPYAAYLADGSEYTGA 139
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y H+SE ++HRPRIQAL++AG D+LA+ETIP E + L LL E+P +A+LSF
Sbjct: 140 Y--HLSEEEFKDFHRPRIQALLDAGCDLLALETIPNGAETEALVHLLSEEFPQVEAYLSF 197
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVY 299
+ + IS+G +V R + Q++AVG NC P +++ L+E+LK + PL+ Y
Sbjct: 198 TAQTVSAISDGTLIEEVGRLA--QSSPQVLAVGFNCTAPHLIAPLLEKLKQVCDKPLLAY 255
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE +Y + V
Sbjct: 256 PNSGE-------------------------------------------IY-------NGV 265
Query: 360 NARWID---RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + LC + Y W +GV L GGCCRT ED + L
Sbjct: 266 TNTWQDNPEQQLC--LTDYSHLWKKQGVQLFGGCCRTRPEDIRRLAGEL 312
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERY 572
IS+G +V R + Q++AVG NC P +++PL+E+LK + PL+ YPNSGE Y
Sbjct: 205 ISDGTLIEEVGRLA--QSSPQVLAVGFNCTAPHLIAPLLEKLKQVCDKPLLAYPNSGEIY 262
Query: 573 D 573
+
Sbjct: 263 N 263
>gi|354596969|ref|ZP_09014986.1| Homocysteine S-methyltransferase [Brenneria sp. EniD312]
gi|353674904|gb|EHD20937.1| Homocysteine S-methyltransferase [Brenneria sp. EniD312]
Length = 321
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 172/395 (43%), Gaps = 113/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + Q H D+ AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCDLND--PLWSAKVLVENPALIYQVHLDYFHAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + S LI+ SV +A
Sbjct: 76 LRF-KSRGFSERQSQALIEKSVRLAVQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+ + S+ +LIAGS+GPYGA L DGSEYRGDY+
Sbjct: 103 ------RDDFRKTHSQVG--------------KLLIAGSIGPYGAYLADGSEYRGDYLLP 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
SE M ++HR R+ L++AG DILA ET+P+ E + L LL E+P AW SF+ +D
Sbjct: 143 QSE--MMDFHRVRMATLLDAGVDILACETLPSFPEIKALAELLTEFPQASAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
H+S+G +V T N P Q++AVG+NC+ V++ + QL E ++PLVVYPNSGE
Sbjct: 201 AHLSDGTPLREV-LTLLNAYP-QVVAVGINCIALNKVTAALAQLSAETSLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV W
Sbjct: 259 H--------------------------------------------------YDAVAKTWG 268
Query: 365 DRD--LCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D D C + +Y+ W G L+GGCCRT D
Sbjct: 269 DGDGHTCS-LAEYLPQWRAAGAKLIGGCCRTTPAD 302
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D H+S+G +V T N P Q++AVG+NC+ V+ + QL E ++PLVVYPNS
Sbjct: 199 DSAHLSDGTPLREV-LTLLNAYP-QVVAVGINCIALNKVTAALAQLSAETSLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|429121452|ref|ZP_19182077.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 680]
gi|426324037|emb|CCK12814.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 680]
Length = 310
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 178/399 (44%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY + +A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDYYDEQPDAG--------------PLLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + +L + +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W R+D
Sbjct: 258 EQYDAV---------------------SKTW--------------------RHDG----- 271
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
C+ + Y+ +W G AL+GGCCRT D ++
Sbjct: 272 ---HACQTLAHYLEEWRAAGAALIGGCCRTTPADIAALR 307
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + +L + +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|325921035|ref|ZP_08182916.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas gardneri
ATCC 19865]
gi|325548484|gb|EGD19457.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas gardneri
ATCC 19865]
Length = 320
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 171/395 (43%), Gaps = 113/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 LLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI AR + +A
Sbjct: 83 LGFAAR-GLDLAQSQALI-------------------------ARSVALA---------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ R D+++ +A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 107 ---AQARTDHLQSQPQAA--------------PLWVAGSVGPYGAYLADGSEYRGDYA-- 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A + ++HRPRI AL +AG D+LA ET+P++ E L LL E+P AW SF+ +D
Sbjct: 148 LPLAQLMDFHRPRIAALADAGVDLLACETLPSANEIVALRLLLEEFPQLHAWFSFTLRDA 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G QV Q+IAVG+NC+ V++ ++ L +PLVVYPNSGE
Sbjct: 208 AHLSDGTPLAQVIPALDACK--QVIAVGINCIALEHVTAALQTLSALTALPLVVYPNSGE 265
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA + RW
Sbjct: 266 H--------------------------------------------------YDAGDKRWH 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C D++ WL G L+GGCCRT D
Sbjct: 276 AGSTTACSLADQH-AQWLAAGARLIGGCCRTTPRD 309
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ V+ ++ L +PLVVYPNS
Sbjct: 206 DAAHLSDGTPLAQVIPALDACK--QVIAVGINCIALEHVTAALQTLSALTALPLVVYPNS 263
Query: 569 GERYD 573
GE YD
Sbjct: 264 GEHYD 268
>gi|156935092|ref|YP_001439008.1| homocysteine methyltransferase [Cronobacter sakazakii ATCC BAA-894]
gi|156533346|gb|ABU78172.1| hypothetical protein ESA_02943 [Cronobacter sakazakii ATCC BAA-894]
Length = 310
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 176/398 (44%), Gaps = 109/398 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
HIS+G + VA Q++A+G+NCV ++ + +L +PLVVYPNSGE
Sbjct: 201 DHISDGTPLSDVAAALAPYT--QIVALGINCVALEKTTAALARLHDATRLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
A+ K W R+D
Sbjct: 259 QYDAVS---------------------KTW--------------------RHDG------ 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
C+ + Y+ +W G AL+GGCCRT D ++
Sbjct: 272 --HACQTLAHYLGEWRAAGAALIGGCCRTTPADIAALR 307
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D HIS+G + VA Q++A+G+NCV + + +L +PLVVYPNS
Sbjct: 199 DSDHISDGTPLSDVAAALAPYT--QIVALGINCVALEKTTAALARLHDATRLPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|359778030|ref|ZP_09281301.1| homocysteine S-methyltransferase [Arthrobacter globiformis NBRC
12137]
gi|359304493|dbj|GAB15130.1| homocysteine S-methyltransferase [Arthrobacter globiformis NBRC
12137]
Length = 319
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 174/400 (43%), Gaps = 119/400 (29%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG +++L + + D PLWS+ L V HRD+ +AGA + +T SYQA+
Sbjct: 19 VDGALATELEAHGCHLDD--PLWSAKVLLEQPQLVKHVHRDYFRAGAAVAITASYQATPQ 76
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
GF + +D E ALE +R D AR
Sbjct: 77 GFA--------------RRGID---EEEALELVALSVRLADEARS--------------- 104
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
EH++E + A +LIAGSVGPYGA L DGSEYRGDY +
Sbjct: 105 ----------EHLAE-----------NPGAGPLLIAGSVGPYGAYLSDGSEYRGDYF--L 141
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDK 246
S E+HRPR+ ALV+AGAD LA ET+P+ EA+ L L++E+ + WLSF+ +D
Sbjct: 142 SRNEFLEFHRPRVAALVDAGADFLACETLPSLPEAEALVELMKEF-DVEGWLSFTLRDGG 200
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVR-PLMVSSLIEQLKTENIPLVVYPNSGEH 305
HIS+G QVA+ + ++A+GVNCV L+ SL K + PL+ YPNSGE
Sbjct: 201 HISDGTPLAQVAK--LSRAQPSVVAIGVNCVPLELVAPSLGALRKATDTPLIAYPNSGES 258
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW-- 363
YDAV+ W
Sbjct: 259 --------------------------------------------------YDAVSKTWRP 268
Query: 364 ------IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D + + + W + G L+GGCCRT ED
Sbjct: 269 ATAIGGPDGNHAASLAEGTALWRELGARLIGGCCRTTPED 308
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G QVA+ + ++A+GVNCV +V+P + L K + PL+ YPNS
Sbjct: 198 DGGHISDGTPLAQVAK--LSRAQPSVVAIGVNCVPLELVAPSLGALRKATDTPLIAYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GESYD 260
>gi|15229396|ref|NP_191884.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
gi|50400668|sp|Q9M1W4.1|HMT2_ARATH RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=AtHMT-2; Short=SMM:Hcy S-methyltransferase 2
gi|16226446|gb|AAL16170.1|AF428402_1 AT3g63250/F16M2_100 [Arabidopsis thaliana]
gi|7523407|emb|CAB86426.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
gi|33589736|gb|AAQ22634.1| At3g63250/F16M2_100 [Arabidopsis thaliana]
gi|110743464|dbj|BAE99618.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
gi|332646935|gb|AEE80456.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
Length = 333
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 179/407 (43%), Gaps = 107/407 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++ + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+K SV+ EA
Sbjct: 79 QGF-EAKGFSREESESLLKKSVEIATEA-------------------------------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + ++ + L R IL+A SVG YGA L DGSEY G Y +
Sbjct: 106 ------RNSYYDKCGTSSSMDDKIL----KKRPILVAASVGSYGAYLADGSEYSGIYGDS 155
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L E+GAD++A ETIP EAQ LL E + W SF+ KD
Sbjct: 156 ITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKD 215
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C ++++AVG+NC P + L+ ++ K + P++VYP
Sbjct: 216 GVNVVSGDSIKECISIAENC-----EKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYP 270
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA
Sbjct: 271 NSGES--------------------------------------------------YDADR 280
Query: 361 ARWIDRDLC--EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W++ E YV W+D GV+L+GGCCRT + RL
Sbjct: 281 KEWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 327
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYDFHLADEK 580
N ++++AVG+NC P + L+ ++ K + P++VYPNSGE YD AD K
Sbjct: 234 NCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYD---ADRK 281
>gi|424798331|ref|ZP_18223873.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 696]
gi|423234052|emb|CCK05743.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 696]
Length = 310
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 178/399 (44%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + +L + +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W R+D
Sbjct: 258 EQYDAV---------------------SKTW--------------------RHDG----- 271
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
C+ + Y+ +W G AL+GGCCRT D ++
Sbjct: 272 ---HACQTLAHYLEEWRAAGAALIGGCCRTTPADIAALR 307
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + +L + +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|195636122|gb|ACG37529.1| homocysteine S-methyltransferase 3 [Zea mays]
Length = 355
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 113/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVQ-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + IL+A ++G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPILVAAALGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + +WLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKD 214
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H+ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W++ D YV +W +G AL+GGCCRT +T+ HR
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCRT-TPNTIRAIHR 324
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D H+ +G+S + +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
>gi|162464074|ref|NP_001105012.1| homocysteine S-methyltransferase 2 [Zea mays]
gi|50400644|sp|Q9FUM9.1|HMT2_MAIZE RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=SMM:Hcy S-methyltransferase 2; AltName:
Full=ZmHMT-2
gi|10732787|gb|AAG22538.1| homocysteine S-methyltransferase-2 [Zea mays]
gi|195645364|gb|ACG42150.1| homocysteine S-methyltransferase 3 [Zea mays]
gi|223948689|gb|ACN28428.1| unknown [Zea mays]
gi|414868888|tpg|DAA47445.1| TPA: homocysteine S-methyltransferase 2 [Zea mays]
Length = 339
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 183/406 (45%), Gaps = 113/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVE-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + +L+A S+G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPVLVAASLGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EA+ LL E + AW SF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEAYVELLEECNINIPAWFSFNSKD 214
Query: 245 DKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
HI +G+S T +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHIVSGDSLIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W++ D YV +W +G L+GGCCRT +T+ HR
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRT-TPNTIRAIHR 324
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D HI +G+S T +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHIVSGDSLIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
>gi|242084136|ref|XP_002442493.1| hypothetical protein SORBIDRAFT_08g020830 [Sorghum bicolor]
gi|241943186|gb|EES16331.1| hypothetical protein SORBIDRAFT_08g020830 [Sorghum bicolor]
Length = 331
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 177/395 (44%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANILITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ IALEA ++
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVE-----IALEAREMFLK--------------------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++ + IL+A S+G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSIPIQ----------HPILVAASIGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + AWLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPAWLSFNSKD 214
Query: 245 DKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
HI +G+S T +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHIVSGDSVIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
W++ D YV +W +G AL+GGCCRT
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCRT 314
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D HI +G+S T +A C + AVG+NC P + LI + K + P+++Y
Sbjct: 214 DGVHIVSGDSVIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIY 268
Query: 566 PNSGERYD 573
PNSGERYD
Sbjct: 269 PNSGERYD 276
>gi|421908577|ref|ZP_16338412.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410117368|emb|CCM81037.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 314
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 175/397 (44%), Gaps = 113/397 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLADS--LWSAKVLLENPQLIRDVHLDYFRAGAQVAITASYQATP 75
Query: 66 GGF-MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
G LD S LI SV+ ++A
Sbjct: 76 AGXXFAARGLDEAQSRALIGKSVELARKA------------------------------- 104
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 105 ---------------REAYLAE------NPQAGTLLVAGSVGPYGAFLADGSEYRGDY-- 141
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ--MLCRLLREWPHQKAWLSFSC 242
S A +HRPR++AL++AGAD+LA ET+P+ E Q LL+E+P +AW SF+
Sbjct: 142 QRSAAEFQAFHRPRVEALLDAGADLLACETLPSFAEIQALAAXXLLQEYPRARAWYSFTL 201
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+D +H+S+G +V + NP Q++AVG+NC+ + + L + +PLVVYPN
Sbjct: 202 RDAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPN 259
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 260 SGEH--------------------------------------------------YDAVSK 269
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + C + Y+ WL G L+GGCCRT +D
Sbjct: 270 TWHHHGEACASLADYLPQWLAAGAKLIGGCCRTTPKD 306
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 203 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEHYD 265
>gi|162464283|ref|NP_001105013.1| homocysteine S-methyltransferase 3 [Zea mays]
gi|50400643|sp|Q9FUM8.1|HMT3_MAIZE RecName: Full=Homocysteine S-methyltransferase 3; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
3; Short=SMM:Hcy S-methyltransferase 3; AltName:
Full=ZmHMT-3
gi|10732789|gb|AAG22539.1|AF297046_1 homocysteine S-methyltransferase-3 [Zea mays]
gi|219886333|gb|ACL53541.1| unknown [Zea mays]
gi|224034199|gb|ACN36175.1| unknown [Zea mays]
gi|414877961|tpg|DAA55092.1| TPA: homocysteine S-methyltransferase 3 [Zea mays]
Length = 338
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 113/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVQ-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + IL+A ++G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPILVAAALGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + +WLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKD 214
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H+ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W++ D YV +W +G AL+GGCCRT +T+ HR
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCRT-TPNTIRAIHR 324
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D H+ +G+S + +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
>gi|6685163|gb|AAF23822.1|AF219223_1 homocysteine S-methyltransferase AtHMT-2 [Arabidopsis thaliana]
Length = 333
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 181/407 (44%), Gaps = 107/407 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++ + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+K SV+ IA EA
Sbjct: 79 QGF-EAKGFSREESESLLKKSVE-----IACEA--------------------------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + ++ + L R IL+A SVG YGA L DGSEY G Y +
Sbjct: 106 ------RNSYYDKCGTSSSMDDKIL----KKRPILVAASVGSYGAYLADGSEYSGIYGDS 155
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L E+GAD++A ETIP EAQ LL E + W SF+ KD
Sbjct: 156 ITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKD 215
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C ++++AVG+NC P + L+ ++ K + P++VYP
Sbjct: 216 GVNVVSGDSIKECISIAENC-----EKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYP 270
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA
Sbjct: 271 NSGES--------------------------------------------------YDADR 280
Query: 361 ARWIDRDLC--EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W++ E YV W+D GV+L+GGCCRT + RL
Sbjct: 281 KEWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 327
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
N ++++AVG+NC P + L+ ++ K + P++VYPNSGE YD
Sbjct: 234 NCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYD 277
>gi|270262976|ref|ZP_06191247.1| homocysteine methyltransferase [Serratia odorifera 4Rx13]
gi|270043660|gb|EFA16753.1| homocysteine methyltransferase [Serratia odorifera 4Rx13]
Length = 312
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 181/405 (44%), Gaps = 110/405 (27%)
Query: 2 ANVKLI-DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
AN LI DG +++L D+ D PLWS+ L + + Q H D+ AGA +T S
Sbjct: 13 ANRTLILDGALATELEARGCDLSD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITAS 70
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ GF+ L+ S LI SV ++A
Sbjct: 71 YQATPLGFLRR-GLNQQQSLALIAKSVQLAQQA--------------------------- 102
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R DY+ +A +LIAGSVGPYGA L DGSEYRG
Sbjct: 103 -----------RSDYLAQHPQAA--------------PLLIAGSVGPYGAYLADGSEYRG 137
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY + + M +HRPRI AL EAG D+LA ET+P+ E Q L LL+E+P AW +F
Sbjct: 138 DY--SLPQEEMIAFHRPRIAALAEAGVDLLACETLPSFSELQALLALLQEFPTLGAWFAF 195
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +D +H+S+G TQV NP Q++A+G+NC+ V+ + QL T + PL+VY
Sbjct: 196 TLRDSQHLSDGTPLTQV-LAALRGNP-QVLAIGINCIALENVTPALSQLATLTDKPLLVY 253
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGEH A+ K W +C + L+
Sbjct: 254 PNSGEHYDAVS---------------------KTW--HACGGGSSSLI------------ 278
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ + +W + G L+GGCCRT +D + R
Sbjct: 279 --------------EQIGEWQNIGARLIGGCCRTTPQDIRQIAAR 309
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G TQV NP Q++A+G+NC+ V+P + QL T + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTQV-LAALRGNP-QVLAIGINCIALENVTPALSQLATLTDKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|75316760|sp|Q4VNK0.1|SMTA_BRAOT RecName: Full=Selenocysteine Se-methyltransferase; Short=BoSMT
gi|60459900|gb|AAX20123.1| selenocysteine methyltransferase [Brassica oleracea var. italica]
Length = 346
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 182/405 (44%), Gaps = 105/405 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 26 IIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L++ SV+ IA EA
Sbjct: 84 QGF-EAKGYSIEKSESLLRKSVE-----IACEA--------------------------- 110
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + + R IL+A SVG YGA L DGSEY G Y +
Sbjct: 111 ------RSTYYDKCKDDDDK------KILKKRPILVAASVGSYGAFLADGSEYSGIYGDL 158
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ T+ ++HR R+Q L E+GADI+A ETIP EAQ LL E + W SF+ KD
Sbjct: 159 ITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFSFNSKD 218
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYP 300
++ +G+S + +A C ++++AVG+NC P + L+ E K + P++VYP
Sbjct: 219 GVNVVSGDSIKECIAIAEAC-----EKVVAVGINCTPPRFIEGLVLEIAKVTSKPILVYP 273
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE R P +K W+ E N
Sbjct: 274 NSGE---------------------RYDPERKEWV------------------ENTGVGN 294
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
++ YV W+D GV+L+GGCCRT + RL
Sbjct: 295 EDFVS---------YVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 21/99 (21%)
Query: 479 DWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQ---VARTCYNMNPDQL 535
+ LDEGVA + G + D ++ +G+S + +A C +++
Sbjct: 199 ELLDEGVAKIPGW------------FSFNSKDGVNVVSGDSIKECIAIAEAC-----EKV 241
Query: 536 IAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
+AVG+NC P + L+ ++ K + P++VYPNSGERYD
Sbjct: 242 VAVGINCTPPRFIEGLVLEIAKVTSKPILVYPNSGERYD 280
>gi|418521695|ref|ZP_13087737.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410702230|gb|EKQ60739.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 321
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 174/395 (44%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS++ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSAHVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAMQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LLR E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R + WL G L+GGCCRT D
Sbjct: 276 HAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|429114310|ref|ZP_19175228.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 701]
gi|449309313|ref|YP_007441669.1| homocysteine methyltransferase [Cronobacter sakazakii SP291]
gi|426317439|emb|CCK01341.1| Homocysteine S-methyltransferase [Cronobacter sakazakii 701]
gi|449099346|gb|AGE87380.1| homocysteine methyltransferase [Cronobacter sakazakii SP291]
Length = 310
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 176/394 (44%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAG D+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGVDLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + +L + +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPNSG 257
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W R+D
Sbjct: 258 EQYDAVS---------------------KTW--------------------RHDG----- 271
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C+ + Y+ +W G AL+GGCCRT D
Sbjct: 272 ---HACQTLAHYLGEWRAAGAALIGGCCRTTPAD 302
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + +L + +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALARLHEATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|390989385|ref|ZP_10259683.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555889|emb|CCF66658.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 321
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 174/395 (44%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAMQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LLR E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ R + WL G L+GGCCRT D
Sbjct: 276 HVGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|317049224|ref|YP_004116872.1| homocysteine S-methyltransferase [Pantoea sp. At-9b]
gi|316950841|gb|ADU70316.1| homocysteine S-methyltransferase [Pantoea sp. At-9b]
Length = 311
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 171/394 (43%), Gaps = 112/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCNLADT--LWSAKVLMENPELIYQVHYDYFAAGAHCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + LD S LI+ S + A
Sbjct: 75 QGFAQ-RGLDEAQSRALIQQSAALAQRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY T+ P +L+AGS+GPYGA L +G+EYRGDY
Sbjct: 102 ------RDDYRAASG-----------TNAP---LLVAGSIGPYGAFLANGAEYRGDYALP 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+E M +HRPR+ AL+EAG D+LA ET+P+ EAQ L LL E+P AW SF+ +D
Sbjct: 142 AAE--MKAFHRPRVAALLEAGVDLLACETLPSFAEAQALVSLLAEFPDSSAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G + VA N +P Q++AVG+NCV V+ + L+ PL+VYPNSGE
Sbjct: 200 NHISDGTPLSTVA-ALLNASP-QVVAVGINCVALENVTPALRSLQALCTQPLLVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDATSKTWH 267
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
C DK+ +W G L+GGCCRT +D
Sbjct: 268 SAPSGCTLHDKF-PEWQQAGARLIGGCCRTTPQD 300
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + VA N +P Q++AVG+NCV V+P + L+ PL+VYPNS
Sbjct: 198 DANHISDGTPLSTVA-ALLNASP-QVVAVGINCVALENVTPALRSLQALCTQPLLVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|113204693|gb|ABI34093.1| homocysteine S-methyltransferase [Medicago sativa]
Length = 295
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 53/304 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF+++L + D+ D PLWS+ L T+ V + H D++ +GA+I++T+SYQA+I
Sbjct: 9 IIDGGFATELERHGVDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIILTSSYQATI 66
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + L++ V+ +EA RDI Y
Sbjct: 67 QGF-EAKGFSKEEGQALLRRRVELAREA----------------RDIY-------YDRCT 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+D ++ D E +R +R ILIA SVG YGA L DGSEY GDY +
Sbjct: 103 KDSFDFIRD-----------ERYR------SRPILIAASVGSYGAYLADGSEYTGDYGDA 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK-AWLSFSCKD 244
V+ T+ ++HR R++ LV+AGAD++A ETIP +AQ LL E + AW SFSCKD
Sbjct: 146 VTVQTLKDFHRERVKILVDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKD 205
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
+ +++G+S + +A +C Q++AVGVNC P + LI + K + P++VYP
Sbjct: 206 ENKVASGDSILECASIADSC-----PQVVAVGVNCTAPRFIHGLISSIKKATSKPILVYP 260
Query: 301 NSGE 304
NSGE
Sbjct: 261 NSGE 264
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D+ +++G+S + +A +C Q++AVGVNC P + LI + K + P++VY
Sbjct: 205 DENKVASGDSILECASIADSC-----PQVVAVGVNCTAPRFIHGLISSIKKATSKPILVY 259
Query: 566 PNSGERYD 573
PNSGE Y+
Sbjct: 260 PNSGETYN 267
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 49/126 (38%)
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK-AWLSFSCKTEN- 343
++ E + ++V ++G ++A ETIP +AQ LL E + AW SFSCK EN
Sbjct: 151 LKDFHRERVKILV--DAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKDENK 208
Query: 344 ---------------------------------------------IPLVVYPNSGERYDA 358
P++VYPNSGE Y+A
Sbjct: 209 VASGDSILECASIADSCPQVVAVGVNCTAPRFIHGLISSIKKATSKPILVYPNSGETYNA 268
Query: 359 VNARWI 364
N W+
Sbjct: 269 DNNTWV 274
>gi|427407236|ref|ZP_18897441.1| hypothetical protein HMPREF9161_01801 [Selenomonas sp. F0473]
gi|425707711|gb|EKU70755.1| hypothetical protein HMPREF9161_01801 [Selenomonas sp. F0473]
Length = 327
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 156/305 (51%), Gaps = 41/305 (13%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F+++L + D LWS+ L D V H D+++AGAD+V + SYQ
Sbjct: 12 DVLILDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDIHLDYLRAGADVVTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM+ + + LI SV+ +EA RDI +
Sbjct: 70 ATVEGFMK-KGFTEEEAAALIVRSVEIAREA----------------RDIYCLTILA--- 109
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EY + + E AE I +P L+A SVGPYGA L DGSEYRGDY
Sbjct: 110 ------DEY---HAQEAREEGCAEQRGTIGGEP----LVAASVGPYGAYLADGSEYRGDY 156
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFS 241
+ E + +H R+ L E D+LA ET+P EA+ + R LRE H AW SFS
Sbjct: 157 --GMDEDALTVFHAERLTLLAEGQPDLLACETLPCLTEARAIVRALREKEIHIPAWFSFS 214
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYP 300
C+D HIS+G AR + + + AVGVNC P V SLI ++ E + P+VVYP
Sbjct: 215 CRDGAHISDGTPIADCAR--FLADVPEAAAVGVNCTAPQYVESLIRTIRAETDKPIVVYP 272
Query: 301 NSGEH 305
NSGE+
Sbjct: 273 NSGEN 277
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G AR + + + AVGVNC P V LI ++ E + P+VVYPNS
Sbjct: 217 DGAHISDGTPIADCAR--FLADVPEAAAVGVNCTAPQYVESLIRTIRAETDKPIVVYPNS 274
Query: 569 GERYD 573
GE YD
Sbjct: 275 GENYD 279
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 49/139 (35%)
Query: 306 ILAIETIPASKEAQMLCRLLREWP-NQKAWLSFSCK------------------------ 340
+LA ET+P EA+ + R LRE + AW SFSC+
Sbjct: 181 LLACETLPCLTEARAIVRALREKEIHIPAWFSFSCRDGAHISDGTPIADCARFLADVPEA 240
Query: 341 ----------------------TENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTD 378
+ P+VVYPNSGE YDA + W E
Sbjct: 241 AAVGVNCTAPQYVESLIRTIRAETDKPIVVYPNSGENYDASDKTW--HGSAEDFAAGARR 298
Query: 379 WLDEGVALVGGCCRTYAED 397
W G L+GGCCRT D
Sbjct: 299 WRAAGARLIGGCCRTSPRD 317
>gi|449458464|ref|XP_004146967.1| PREDICTED: homocysteine S-methyltransferase 2-like [Cucumis
sativus]
gi|449518264|ref|XP_004166162.1| PREDICTED: homocysteine S-methyltransferase 2-like [Cucumis
sativus]
Length = 338
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 182/395 (46%), Gaps = 104/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + D+ D PLWS+ L T+ + + H D+++AGADI++T SYQA+I
Sbjct: 26 IVDGGLATELERHGADLND--PLWSAKCLLTSPHLIHRVHMDYLEAGADIIITASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E D S L++ SV+ IA A
Sbjct: 84 QGF-ESKGYTTDESESLLRKSVE-----IACTA--------------------------- 110
Query: 126 RDGSEYRGDYVEHVSEATMAEW--HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
R +Y + + +T E R+ R ILIA SVG YGA L DGSEY G Y
Sbjct: 111 ------RVNYYDRCNTSTPDESPDGRIFKK---RQILIAASVGSYGAYLADGSEYSGIYG 161
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSC 242
+ ++ + E+HR R++ L E+GAD++A ETIP EA+ LL E AW +F+
Sbjct: 162 DSMTLEALKEFHRKRVKVLAESGADLIAFETIPNKLEAKAYAELLEEENISLPAWFAFNS 221
Query: 243 KDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVV 298
KD H+ +G+S+++ +A +C N +AVG+NC P + LI + K P+V+
Sbjct: 222 KDGIHVVSGDSYSECVSIAESCRNT-----VAVGINCTPPRFIHGLISSIKKVTTKPIVI 276
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE S +A L+EW
Sbjct: 277 YPNSGE----------SYDAD-----LKEWVQ---------------------------- 293
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
N D D YV W + G ++ GGCCRT
Sbjct: 294 -NTGVSDDDFV----SYVNKWCETGASIFGGCCRT 323
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIP 561
+ D H+ +G+S+++ +A +C N +AVG+NC P + LI +K P
Sbjct: 219 FNSKDGIHVVSGDSYSECVSIAESCRNT-----VAVGINCTPPRFIHGLISSIKKVTTKP 273
Query: 562 LVVYPNSGERYDFHLADEKNNCVKSD 587
+V+YPNSGE YD L + N SD
Sbjct: 274 IVIYPNSGESYDADLKEWVQNTGVSD 299
>gi|389571651|ref|ZP_10161741.1| homocysteine methyltransferase [Bacillus sp. M 2-6]
gi|388428764|gb|EIL86559.1| homocysteine methyltransferase [Bacillus sp. M 2-6]
Length = 315
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 181/395 (45%), Gaps = 110/395 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q H D+ +AGAD T SYQ +I
Sbjct: 18 ILDGALATELERKGCDLNDS--LWSAKILIEQPELIQQVHLDYFQAGADCATTASYQTTI 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + + +L+K SV KEA
Sbjct: 76 DGFAK-KGYTKEEAIELMKRSVTLAKEAC------------------------------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ D E HR P +AGSVGP+GA L DGSEY+G+Y
Sbjct: 104 ---EQFWQD-----------ETHRKERTKP----FVAGSVGPFGAYLSDGSEYKGNY--G 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
++E + ++HRPRIQALVE+GADILA ETIP EA + +LL+ E+ AW++FS KD
Sbjct: 144 LTEQALIDFHRPRIQALVESGADILACETIPCLIEAIAIAKLLQDEFSGVYAWITFSAKD 203
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
+HIS G+ + + P +Q+ AVGVNC P +SSLI+++K + P+VVYPNS
Sbjct: 204 GQHISEGDLLKDCVQA---LEPYEQIAAVGVNCTPPQYMSSLIQEMKKGTSKPIVVYPNS 260
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE L + P +K W R D +
Sbjct: 261 GE--------------------LYD-PEEKVW--------------------RGDTSHHT 279
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W +G ++GGCCRT ED
Sbjct: 280 F---------GECAQQWYKDGAQIIGGCCRTTPED 305
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 378 DWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKD 436
+ + V L C + +D H K R +V+G + + + DG +Y L +
Sbjct: 90 ELMKRSVTLAKEACEQFWQDETHRKERTKPFVAGSVGPFGAYLSDGSEYKGNYGLT--EQ 147
Query: 437 AVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYA 496
A++ HR I+ L + + L + C + L + + V YA
Sbjct: 148 ALIDFHRPRIQA------LVESGADILACETIPCLIEAIAIAKLLQDEFSGV------YA 195
Query: 497 EDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQL 555
T K D +HIS G+ + + P +Q+ AVGVNC P +S LI+++
Sbjct: 196 WITFSAK------DGQHISEGDLLKDCVQA---LEPYEQIAAVGVNCTPPQYMSSLIQEM 246
Query: 556 KT-ENIPLVVYPNSGERYD 573
K + P+VVYPNSGE YD
Sbjct: 247 KKGTSKPIVVYPNSGELYD 265
>gi|455641884|gb|EMF21055.1| homocysteine methyltransferase [Citrobacter freundii GTC 09479]
Length = 310
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 171/401 (42%), Gaps = 111/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF DLD S LI SV
Sbjct: 76 AGFAA-RDLDEAQSKVLIGKSV-------------------------------------- 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 97 --------ELARKAREAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL++AGAD+LA ET+P E L LL +P +AW SF+ +D
Sbjct: 143 AEE--FQAFHRPRVEALLDAGADLLACETLPNFAEISALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
+H+S+G V + Q++A+G+NC+ ++ ++ L +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDAV+ W
Sbjct: 259 --------------------------------------------------QYDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+ C + Y+ W G L+GGCCRT +D +K R
Sbjct: 269 HHGEHCARLADYLPQWQAAGARLIGGCCRTTPKDIAVLKAR 309
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLADY--PQVVALGINCIALENTTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|21112401|gb|AAM40642.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574532|gb|AAY49942.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 347
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 171/394 (43%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 52 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 109
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + A I AR + +A
Sbjct: 110 QGF---------------------AARGLGLAQSQALI-----ARSVALA---------- 133
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ R D+ L A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 134 ---AQARADH--------------LAAHPQAAPLWVAGSVGPYGAYLADGSEYRGDYALP 176
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ M ++HRPRI ALV+AG D+LA ET+P++ E L LL E+P AW SF+ +D
Sbjct: 177 VAQ--MLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEFPQVHAWFSFTLRDA 234
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G QV + P Q++AVG+NC+ V++ ++ L ++PLVVYPNSGE
Sbjct: 235 AHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNSGE 292
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA + RW
Sbjct: 293 H--------------------------------------------------YDASDKRWH 302
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W G L+GGCCRT D
Sbjct: 303 AGTTVACSLATQRAQWHAAGARLIGGCCRTTPAD 336
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV + P Q++AVG+NC+ V+ ++ L ++PLVVYPNS
Sbjct: 233 DAAHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNS 290
Query: 569 GERYD 573
GE YD
Sbjct: 291 GEHYD 295
>gi|325962525|ref|YP_004240431.1| homocysteine/selenocysteine methylase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468612|gb|ADX72297.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Arthrobacter
phenanthrenivorans Sphe3]
Length = 323
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 172/392 (43%), Gaps = 105/392 (26%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L ++ D PLWS+ L + + HRD+ +AGA I T SYQA+ G
Sbjct: 26 DGALATELEARGCNLDD--PLWSAKVLLEQPHLIKEVHRDYFRAGARIATTASYQATPQG 83
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F + + E ALE +R D AR
Sbjct: 84 F-----------------APRGISEQEALELVALSVRLADEARR---------------- 110
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
EH L + A +L+AGSVGPYGA L DGSEY GDYV +
Sbjct: 111 ---------EH-----------LAANPGAGPLLVAGSVGPYGAYLADGSEYSGDYVLSTT 150
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
E ++HRPRI ALVEAGAD LA ET+P+ EAQ L L +E+ ++W SFS +D H
Sbjct: 151 E--FQDFHRPRITALVEAGADFLACETLPSFPEAQALLALTKEF-DVESWFSFSLRDGGH 207
Query: 248 ISNGESFTQVARTCYNMNPDQLI-AVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
IS+G T VA + + L+ A+GVNCV +V+ + L E + PLV YPNSGE
Sbjct: 208 ISDGTPLTTVAAV---LGAEPLVAAIGVNCVPLHLVTPALAALHRETDKPLVAYPNSGET 264
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
P K W G+ A + R D
Sbjct: 265 Y---------------------DPATKTW------------------GQA--AASGRGRD 283
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
P D VT W D G ++GGCCRT D
Sbjct: 284 GTPATPADGAVT-WRDLGARIIGGCCRTTPRD 314
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRPLMVSPLIEQLKTE-NIPLVVYPN 567
D HIS+G T VA + + L+A +GVNCV +V+P + L E + PLV YPN
Sbjct: 204 DGGHISDGTPLTTVAAV---LGAEPLVAAIGVNCVPLHLVTPALAALHRETDKPLVAYPN 260
Query: 568 SGERYD 573
SGE YD
Sbjct: 261 SGETYD 266
>gi|440231865|ref|YP_007345658.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Serratia marcescens
FGI94]
gi|440053570|gb|AGB83473.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Serratia marcescens
FGI94]
Length = 313
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 178/401 (44%), Gaps = 109/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + Q H D+ +AGA +T SYQA+
Sbjct: 18 ILDGALATELEARGCDLSD--PLWSAKVLLENPTLIYQVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L+ + + LI +SV ++A
Sbjct: 76 QGFLRR-GLNEEQALTLIATSVQLAQQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY+ +A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RADYLAQQPQAA--------------PLLVAGSVGPYGAFLADGSEYRGDY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +A M +HRPRI AL AG D+LA ET+P+ E Q L LL ++P AW SF+ +D
Sbjct: 141 LPQAEMIAFHRPRIAALAAAGVDLLACETLPSFAELQALLTLLADYPTLGAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS-SLIEQLKTENIPLVVYPNSGE 304
+H+S+G +VA N +P Q +AVGVNC+ V+ +L +PL+ YPNSGE
Sbjct: 201 EHLSDGTPLAEVA-ALLNASP-QALAVGVNCIALEQVTPALRTLAALTTLPLLAYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H A+ K W +C E+ L+ + DA
Sbjct: 259 HYDAVS---------------------KTW--HACDGEHGSLI------GQLDA------ 283
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W G L+GGCCRT +D + +L
Sbjct: 284 --------------WRQSGARLIGGCCRTTPQDIRAIAGQL 310
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV-YPNS 568
D +H+S+G +VA N +P Q +AVGVNC+ V+P + L ++ YPNS
Sbjct: 199 DSEHLSDGTPLAEVA-ALLNASP-QALAVGVNCIALEQVTPALRTLAALTTLPLLAYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|432856044|ref|XP_004068342.1| PREDICTED: homocysteine S-methyltransferase 2-like [Oryzias
latipes]
Length = 320
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 62/338 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + G + G PLWS+ L T A+ H F+ +GAD++ T +YQAS+
Sbjct: 18 ILDGGLATELEAH-GAQLQGDPLWSARLLHTNPKAIKDAHHRFLLSGADVITTATYQASV 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + + +L+ S V +E + +G+ GP
Sbjct: 77 QGFVTHLGMSAERAKELLMSGVHLAREVV----------------KNFGSGNTGP----- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
L+AGS+G YGA L D SEY G + E
Sbjct: 116 ----------------------------------LVAGSIGSYGAYLHDTSEYTGTFAEK 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++ + +WHRP+++ L+ AGAD+LA ETIP+ KEA + LLRE+P AWLSFS KD+
Sbjct: 142 MTVDELKDWHRPQVEGLLAAGADLLAFETIPSIKEADAVVELLREFPDSSAWLSFSVKDE 201
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP---LVVYPNS 302
IS+G F + R QL+AVGVNC P +V L++ ++ P VVYPNS
Sbjct: 202 TRISDGSPFAEAVRVASRSA--QLLAVGVNCCSPTVVEPLLDSASSQLSPDMSWVVYPNS 259
Query: 303 GEHILAIETIPASKEAQM-LCRLLREWPNQKAWLSFSC 339
G + + A E+ + + L R W Q A L C
Sbjct: 260 GWEYDSQQGWQARGESSIWIPELSRRWVKQGAALIGGC 297
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 50/131 (38%), Gaps = 48/131 (36%)
Query: 309 IETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE-------------------------- 342
ETIP+ KEA + LLRE+P+ AWLSFS K E
Sbjct: 168 FETIPSIKEADAVVELLREFPDSSAWLSFSVKDETRISDGSPFAEAVRVASRSAQLLAVG 227
Query: 343 ----------------------NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
++ VVYPNSG YD+ + + + W+
Sbjct: 228 VNCCSPTVVEPLLDSASSQLSPDMSWVVYPNSGWEYDSQQGWQARGESSIWIPELSRRWV 287
Query: 381 DEGVALVGGCC 391
+G AL+GGCC
Sbjct: 288 KQGAALIGGCC 298
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIP---LVVYP 566
D+ IS+G F + R QL+AVGVNC P +V PL++ ++ P VVYP
Sbjct: 200 DETRISDGSPFAEAVRVASRSA--QLLAVGVNCCSPTVVEPLLDSASSQLSPDMSWVVYP 257
Query: 567 NSGERYD 573
NSG YD
Sbjct: 258 NSGWEYD 264
>gi|403511218|ref|YP_006642856.1| homocysteine S-methyltransferase [Nocardiopsis alba ATCC BAA-2165]
gi|402802582|gb|AFR09992.1| homocysteine S-methyltransferase [Nocardiopsis alba ATCC BAA-2165]
Length = 311
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 165/403 (40%), Gaps = 115/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L Y D+ G LWS+ LA + + + HRD+ +AGAD+ + YQAS+
Sbjct: 19 VVDGGLATRLEAYGRDL--GGGLWSARLLAEEPELIARVHRDYFEAGADVAIAAGYQASV 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + I SV+ + D L+A VGPYGA+
Sbjct: 77 AGFVS-LGYSRRRALESIARSVELA------------VGERDAFGSGLVAAGVGPYGAAR 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY GDY + E + WH
Sbjct: 124 ADGSEYTGDY--DLDEEGLYRWH------------------------------------- 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
R R L +AGAD++A ET+P+ EA+ L RL E P + W SFSC D
Sbjct: 145 ----------RERWNVLTDAGADLVACETLPSLAEARALARLTLETPGARVWFSFSCSDG 194
Query: 246 KHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ IS+G +VA + +L+AVGVNCV P V SL+ + + +P V YPNSGE
Sbjct: 195 ERISDGTPLREVAAELAPLRESGRLVAVGVNCVPPRHVPSLVRAVASAGLPAVAYPNSGE 254
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
W + V+ SGE
Sbjct: 255 G----------------------WDAARG--------------VWTGSGE---------- 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
E + W EG LVGGCCRT E ++ L+D
Sbjct: 269 ----SERFGEAAVSWCREGAVLVGGCCRTGPEHVRAVREALED 307
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
D + IS+G +VA + +L+AVGVNCV P V L+ + + +P V YPNS
Sbjct: 193 DGERISDGTPLREVAAELAPLRESGRLVAVGVNCVPPRHVPSLVRAVASAGLPAVAYPNS 252
Query: 569 GERYD 573
GE +D
Sbjct: 253 GEGWD 257
>gi|161485699|ref|NP_636718.2| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|162017097|ref|YP_243962.2| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 320
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 171/394 (43%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + A I AR + +A
Sbjct: 83 QGF---------------------AARGLGLAQSQALI-----ARSVALA---------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ R D+ L A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 107 ---AQARADH--------------LAAHPQAAPLWVAGSVGPYGAYLADGSEYRGDYALP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ M ++HRPRI ALV+AG D+LA ET+P++ E L LL E+P AW SF+ +D
Sbjct: 150 VAQ--MLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEFPQVHAWFSFTLRDA 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G QV + P Q++AVG+NC+ V++ ++ L ++PLVVYPNSGE
Sbjct: 208 AHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNSGE 265
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA + RW
Sbjct: 266 H--------------------------------------------------YDASDKRWH 275
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W G L+GGCCRT D
Sbjct: 276 AGTTVACSLATQRAQWHAAGARLIGGCCRTTPAD 309
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV + P Q++AVG+NC+ V+ ++ L ++PLVVYPNS
Sbjct: 206 DAAHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNS 263
Query: 569 GERYD 573
GE YD
Sbjct: 264 GEHYD 268
>gi|188992347|ref|YP_001904357.1| homocysteine methyltransferase [Xanthomonas campestris pv.
campestris str. B100]
gi|167734107|emb|CAP52313.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
campestris]
Length = 320
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 171/394 (43%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + A I AR + +A
Sbjct: 83 QGF---------------------AARGLGLAQSQALI-----ARSVALA---------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ R D+ L A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 107 ---AQARADH--------------LAAHPQAAPLWVAGSVGPYGAYLADGSEYRGDYALP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ M ++HRPRI ALV+AG D+LA ET+P++ E L LL E+P AW SF+ +D
Sbjct: 150 VAQ--MLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEFPQVHAWFSFTLRDA 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G QV + P Q++AVG+NC+ V++ ++ L ++PLVVYPNSGE
Sbjct: 208 AHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNSGE 265
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA + RW
Sbjct: 266 H--------------------------------------------------YDASDKRWH 275
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W G L+GGCCRT D
Sbjct: 276 AGTTVACSLATQRAQWHAAGARLIGGCCRTTPAD 309
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV + P Q++AVG+NC+ V+ ++ L ++PLVVYPNS
Sbjct: 206 DAAHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNS 263
Query: 569 GERYD 573
GE YD
Sbjct: 264 GEHYD 268
>gi|168025123|ref|XP_001765084.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683671|gb|EDQ70079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 175/390 (44%), Gaps = 100/390 (25%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF++QL + DI D PLWS+ L T + V + HR++++AGA ++ T SYQA+I G
Sbjct: 29 DGGFATQLERHGADIND--PLWSASCLITIPELVRKVHREYLEAGAGVISTASYQATIQG 86
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F + L + + L++ SV +E R+ + R+ + + R
Sbjct: 87 F-QSRGLSTNEAEDLLQRSVRIAQE------ERDRVWKESQNRE---------HARTARA 130
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
GS R L+A S+G YGA L DGSEY GDY ++
Sbjct: 131 GSNLRA--------------------------LVAASIGSYGAYLADGSEYSGDYGPSMT 164
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKDDK 246
+ ++HR R+ L +AG D+LAIETIP E Q L LL E + AW+SF+ KD
Sbjct: 165 VDKLKDFHRRRLVVLADAGPDLLAIETIPCKLETQALVELLHEEDLRIPAWISFNSKDGV 224
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGEH 305
++ +G+SF+ + P ++ AVG+NC P + LI K N P+VVYPNSGEH
Sbjct: 225 NVVSGDSFSDCV-ALVDKCP-EVAAVGINCTPPRFILDLIHAARKVTNKPIVVYPNSGEH 282
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
YD V +W++
Sbjct: 283 --------------------------------------------------YDPVIKQWVE 292
Query: 366 RDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
D YV +W G L+GGCCRT
Sbjct: 293 STGITDTDFVSYVHEWRKAGAQLIGGCCRT 322
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D ++ +G+SF+ + P ++ AVG+NC P + LI K N P+VVYPNS
Sbjct: 222 DGVNVVSGDSFSDCV-ALVDKCP-EVAAVGINCTPPRFILDLIHAARKVTNKPIVVYPNS 279
Query: 569 GERYD 573
GE YD
Sbjct: 280 GEHYD 284
>gi|418515690|ref|ZP_13081869.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707599|gb|EKQ66050.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 321
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 173/395 (43%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAMQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LLR E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLRHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R + WL G L+GGCCRT D
Sbjct: 276 HAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|402303086|ref|ZP_10822184.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC9]
gi|400379316|gb|EJP32160.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC9]
Length = 332
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 157/310 (50%), Gaps = 44/310 (14%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
++N+ ++DG F+++L + D LWS+ + D V H D+++AGADIV + S
Sbjct: 10 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA++ GF++ + + LI SV+ +EA RDI S+
Sbjct: 68 YQATVEGFVK-KGFTEEQAAALIVRSVELAREA----------------RDIYCLESLA- 109
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI----LIAGSVGPYGASLRDGS 176
EY H E + E + DP L+A SVGPYGA L DGS
Sbjct: 110 --------DEY------HAQEESTREEQTSCSSDPREKSGGAPLVAASVGPYGAYLADGS 155
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQK 235
EYRGDY V E + +H R+ L E D+LA ET+P EA+ + R LRE H
Sbjct: 156 EYRGDY--GVDEDALTAFHADRLVLLAEGQPDLLACETLPCLPEARAIVRALREKKIHIP 213
Query: 236 AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NI 294
AW SFSC+D HIS+G AR ++ + +AVGVNC P + LI ++ E +
Sbjct: 214 AWFSFSCRDGAHISDGTPIADCARFLAGVS--EAVAVGVNCTAPQYIQDLIRAIRRETDK 271
Query: 295 PLVVYPNSGE 304
P+VVYPNSGE
Sbjct: 272 PVVVYPNSGE 281
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G AR ++ + +AVGVNC P + LI ++ E + P+VVYPNS
Sbjct: 222 DGAHISDGTPIADCARFLAGVS--EAVAVGVNCTAPQYIQDLIRAIRRETDKPVVVYPNS 279
Query: 569 GERY 572
GE Y
Sbjct: 280 GEDY 283
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 54/149 (36%), Gaps = 49/149 (32%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWP-NQKAWLSFSCK-------------- 340
LV+ +LA ET+P EA+ + R LRE + AW SFSC+
Sbjct: 176 LVLLAEGQPDLLACETLPCLPEARAIVRALREKKIHIPAWFSFSCRDGAHISDGTPIADC 235
Query: 341 -------TENI-------------------------PLVVYPNSGERYDAVNARWIDRDL 368
+E + P+VVYPNSGE Y + W
Sbjct: 236 ARFLAGVSEAVAVGVNCTAPQYIQDLIRAIRRETDKPVVVYPNSGEDYSVSDKSW--HGT 293
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E W G ++GGCCRT D
Sbjct: 294 AEDFAAGARRWRMAGARIIGGCCRTSPRD 322
>gi|398411258|ref|XP_003856971.1| hypothetical protein MYCGRDRAFT_107675 [Zymoseptoria tritici
IPO323]
gi|339476856|gb|EGP91947.1| hypothetical protein MYCGRDRAFT_107675 [Zymoseptoria tritici
IPO323]
Length = 437
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 177/390 (45%), Gaps = 96/390 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ HPLWS+ L ++ + H D+ AGAD+ +T SYQA+
Sbjct: 72 ILDGALATELEVRGHDL--NHPLWSAKILKDDPASIEEVHVDYYLAGADVAITASYQAAT 129
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E ++ D S LIK SV + A RS A I
Sbjct: 130 LGLTEHFNMTEDESKALIKRSVSVAQSA----------RSKAYASGI------------- 166
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D +R +L+AGSVGPYGA L +GSEYRGDY
Sbjct: 167 ----------------------------DSSRRLLVAGSVGPYGAYLSNGSEYRGDYAR- 197
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+E ++HRPRIQAL+ AGAD+LAIETIP+ E Q + LLR ++P AWLS +
Sbjct: 198 -TEKEFQDFHRPRIQALINAGADLLAIETIPSISEIQTILALLRSDFPDAIAWLSCTAHS 256
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ + + + V R + + DQ+I G+NCV M + ++ L + +IPLV YPNSG
Sbjct: 257 AETLCDQTPWEDVLRLVED-HRDQIIGFGINCVPMAMADATLKYLSQLTSIPLVCYPNSG 315
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ + W ++ P+ + +A
Sbjct: 316 EVWDAVT---------------KTWHGER-----------------PDEALTSEQSSAN- 342
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D+ L D+ W G ++GGCCRT
Sbjct: 343 -DKALALEFDQ----WSKNGARMIGGCCRT 367
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
DQ+I G+NCV M ++ L + +IPLV YPNSGE +D
Sbjct: 278 DQIIGFGINCVPMAMADATLKYLSQLTSIPLVCYPNSGEVWD 319
>gi|381171172|ref|ZP_09880321.1| homocysteine S-methyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688396|emb|CCG36808.1| homocysteine S-methyltransferase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 321
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 174/395 (44%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAMQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ R + WL G L+GGCCRT D
Sbjct: 276 HVSRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|307193334|gb|EFN76196.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 346
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 50/301 (16%)
Query: 6 LIDGGFSSQLSTYVGDI-IDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
++DG F SQ + +G ID P S T + + TH F++AGA+++ TN+Y+ S
Sbjct: 7 VLDGDFISQTAANMGKTSIDDLP--SILATVTNESTMFDTHLAFLRAGANMIRTNTYRTS 64
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
+ FL ++ ++S +I + ++A+ TH S+DP
Sbjct: 65 VYNLNHFLGINVNNSASVITKAAMAARKAVL---THHSETSNDPT--------------- 106
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
V H + W I GS GPYGASL DG+EY G Y +
Sbjct: 107 --------NQEVFHKTRP----W-------------IVGSCGPYGASLGDGTEYTGAYAK 141
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
H+S + +WH PR++AL++AG D+L++ ++P +KEA L+R +P + W+SF C +
Sbjct: 142 HLSLEDLIDWHEPRVRALLDAGVDMLSLGSVPCAKEAAAFVELMRNFPSTRVWISFYCYN 201
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE----NIPLVVYP 300
D+ +++G +F ++ + CYN DQ+IA+GV+CV +V L + E IPL+V P
Sbjct: 202 DRILADGSNFRKIVKHCYNRLGDQMIAIGVSCVESSLVKPLFNIINREIFPRKIPLLVCP 261
Query: 301 N 301
+
Sbjct: 262 D 262
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 509 WDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE----NIPLVV 564
++D+ +++G +F ++ + CYN DQ+IA+GV+CV +V PL + E IPL+V
Sbjct: 200 YNDRILADGSNFRKIVKHCYNRLGDQMIAIGVSCVESSLVKPLFNIINREIFPRKIPLLV 259
Query: 565 YPN 567
P+
Sbjct: 260 CPD 262
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++G +L++ ++P +KEA L+R +P+ + W+SF C + I
Sbjct: 161 DAGVDMLSLGSVPCAKEAAAFVELMRNFPSTRVWISFYCYNDRI 204
>gi|403528269|ref|YP_006663156.1| homocysteine S-methyltransferase [Arthrobacter sp. Rue61a]
gi|403230696|gb|AFR30118.1| homocysteine S-methyltransferase [Arthrobacter sp. Rue61a]
Length = 317
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 175/394 (44%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ D PLWS+ L + Q HRD+ AGA + +T SYQA+
Sbjct: 18 VLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV-GPYGAS 124
GF + L + S +L+ SV EA R+ L G+ GP
Sbjct: 76 QGFA-WRGLGAEESLELVALSVRLADEA---------------RREALADGTANGP---- 115
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
+L+AGSVGPYGA L DGSEYRGDY
Sbjct: 116 ----------------------------------LLVAGSVGPYGAYLADGSEYRGDYT- 140
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+S A ++HRPRI ALVEAGAD LA ET+P+ EA+ L L+ E+ ++W +F+ +D
Sbjct: 141 -LSAAEFRDFHRPRIAALVEAGADFLACETLPSYAEAEALVALVAEF-DVESWFTFTLRD 198
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P ++ AVGVNCV +V+ + L + N PLV YPNSG
Sbjct: 199 SGHISDGTPIGDVA-VLLSAEP-RVTAVGVNCVPLELVTDALGTLHRFSNKPLVAYPNSG 256
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W P++G + A
Sbjct: 257 ESYDAV---------------------TKTW--------------APSAGVQGSGTLA-- 279
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DW D G L+GGCCRT D
Sbjct: 280 ----------GNAPDWQDRGARLIGGCCRTTPRD 303
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G VA + P ++ AVGVNCV +V+ + L + N PLV YPNS
Sbjct: 198 DSGHISDGTPIGDVA-VLLSAEP-RVTAVGVNCVPLELVTDALGTLHRFSNKPLVAYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GESYD 260
>gi|384420009|ref|YP_005629369.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353462922|gb|AEQ97201.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 321
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 173/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 83 LGFAAR-GLDVAQSQALIARSVELAVQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ HV W +AGSVGPYGA L DGSEYRGDY+
Sbjct: 110 ------RADHL-HVQPQAAPLW-------------VAGSVGPYGAYLADGSEYRGDYILP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+++ + ++HRPRI AL +AG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IAQ--LMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLLQNEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ V++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACR--QVIAVGINCIALDQVTAALHSLSVLTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH Y S +R+ A +A
Sbjct: 266 EH-------------------------------------------YDASDKRWHAGHASA 282
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ D++ WL G L+GGCCRT D
Sbjct: 283 LTL-----ADQH-AHWLAAGARLIGGCCRTTPRD 310
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ V+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACR--QVIAVGINCIALDQVTAALHSLSVLTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|320530118|ref|ZP_08031188.1| homocysteine S-methyltransferase [Selenomonas artemidis F0399]
gi|320137551|gb|EFW29463.1| homocysteine S-methyltransferase [Selenomonas artemidis F0399]
Length = 333
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 177/399 (44%), Gaps = 88/399 (22%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
++N+ ++DG F+++L + D LWS+ + D V H D+++AGADIV + S
Sbjct: 11 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 68
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA++ GF++ + + LI SV+ +EA RDI
Sbjct: 69 YQATVEGFVK-KGFTEEQAAALIVRSVELAREA----------------RDIYCL----- 106
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
SL D ++ E R + ++P L+A SVGPYGA L DGSEYRG
Sbjct: 107 --ESLADEYHAHEEFTRGSCERCAPAQRRSLGEEP----LVAASVGPYGAYLADGSEYRG 160
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLS 239
DY V E + +H R+ L E D+LA ET+P EA+ + R LRE H AW S
Sbjct: 161 DY--DVDEDALTAFHADRLALLAEGQPDLLACETLPCLPEARAIVRALREKKIHIPAWFS 218
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVV 298
FSC+D HIS+G AR + + A+GVNC P + LI ++ E + P+VV
Sbjct: 219 FSCRDGAHISDGTPIADCAR--FLAGVPEAAAIGVNCTAPQYIEDLIRAIRRETDKPVVV 276
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE A + K+W + E + A
Sbjct: 277 YPNSGEDYSA---------------------SDKSW---------------HGTAEDFAA 300
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R W D G ++GGCCRT D
Sbjct: 301 GARR----------------WRDAGARIIGGCCRTSPRD 323
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G AR + + A+GVNC P + LI ++ E + P+VVYPNS
Sbjct: 223 DGAHISDGTPIADCAR--FLAGVPEAAAIGVNCTAPQYIEDLIRAIRRETDKPVVVYPNS 280
Query: 569 GERY 572
GE Y
Sbjct: 281 GEDY 284
>gi|225432744|ref|XP_002283044.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 1 [Vitis
vinifera]
gi|297737089|emb|CBI26290.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 177/392 (45%), Gaps = 106/392 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L + D + + H D+++AGA I++T SYQA+I
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L + + L++ SV+ IA EA RDI
Sbjct: 82 QGF-EAKGLSREEAEVLLRRSVE-----IACEA-----------RDI------------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
Y E ++ T E R IL+A SVG YGA L DGSEY G Y
Sbjct: 112 ---------YHERCAKGTCLE---------QRPILVAASVGSYGAYLADGSEYSGHYGAA 153
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ T+ ++HR R+Q L E+GAD++A ETIP EA+ LL E + AW SF+ D
Sbjct: 154 VTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEAKAYAELLDEENIKIPAWFSFTSLD 213
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
++ +G+S + A + Q++AVG+NC P + LI + K P+V+YPNSG
Sbjct: 214 GINVVSGDSLIECASIADSCK--QVVAVGINCTPPRFIHGLILLIQKVTTKPVVIYPNSG 271
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD V W
Sbjct: 272 E--------------------------------------------------TYDGVRKEW 281
Query: 364 IDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
+ + D YV+ W + G +L GGCCRT
Sbjct: 282 VKSSGVQDGDFVSYVSKWREAGASLFGGCCRT 313
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D ++ +G+S + A + Q++AVG+NC P + LI + K P+V+YPNS
Sbjct: 213 DGINVVSGDSLIECASIADSCK--QVVAVGINCTPPRFIHGLILLIQKVTTKPVVIYPNS 270
Query: 569 GERYD 573
GE YD
Sbjct: 271 GETYD 275
>gi|440288844|ref|YP_007341609.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048366|gb|AGB79424.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Enterobacteriaceae
bacterium strain FGI 57]
Length = 310
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 170/399 (42%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + H D+ +AGA + +T SYQA+
Sbjct: 18 LLDGAMATELEGRGCNLADS--LWSAKVLMENPTLIRDVHLDYFRAGARVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI AR + +A
Sbjct: 76 AGFAA-RGLDEAQSRALI-------------------------ARSVALA---------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ E +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 100 -----------QEARELYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
E +HRPR++AL+EAGAD+LA ET+P+ E L LL +P +AW SF+ +D
Sbjct: 143 AEE--FQAFHRPRVEALLEAGADLLACETLPSFAEISALAELLTAYPTARAWFSFTLRDA 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPNSGE 304
+H+S+G V T Q+IAVG+NC+ + + L + +PLVVYPNSGE
Sbjct: 201 QHLSDGTPLCDVIATLARY--PQVIAVGINCIALENTNDALCHLHSLTPLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H YDAV+ W
Sbjct: 259 H--------------------------------------------------YDAVSKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
+ C+ + ++ W G L+GGCCRT D +K
Sbjct: 269 HHGEACDTLAHHLPQWQAAGARLIGGCCRTTPADIAALK 307
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D +H+S+G V T Q+IAVG+NC+ + + L + +PLVVYPNS
Sbjct: 199 DAQHLSDGTPLCDVIATLARY--PQVIAVGINCIALENTNDALCHLHSLTPLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|384427269|ref|YP_005636627.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
raphani 756C]
gi|341936370|gb|AEL06509.1| homocysteine S-methyltransferase [Xanthomonas campestris pv.
raphani 756C]
Length = 320
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 170/394 (43%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + A I AR + +A
Sbjct: 83 QGF---------------------AARGLGLAQSQALI-----ARSVALA---------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++ R D+ L A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 107 ---AQARADH--------------LAAHPQAAPLWVAGSVGPYGAYLADGSEYRGDYALP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V++ M ++HRPRI ALV+AG D+LA ET+P++ E L LL E+P AW SF+ +D
Sbjct: 150 VAQ--MLDFHRPRIAALVDAGVDLLACETLPSASEITALRLLLEEFPQVHAWFSFTLRDA 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G QV + P Q++AVG+NC+ V++ ++ L ++PLVVYPNSGE
Sbjct: 208 AHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNSGE 265
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
H YDA + RW
Sbjct: 266 H--------------------------------------------------YDASDKRWH 275
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W G L+GGCCRT D
Sbjct: 276 AGTTAACSLATQRAQWHAAGARLIGGCCRTTPAD 309
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV + P Q++AVG+NC+ V+ ++ L ++PLVVYPNS
Sbjct: 206 DAAHLSDGTPLAQVI-PALDACP-QVVAVGINCIAIEQVTAALQSLAALTSLPLVVYPNS 263
Query: 569 GERYD 573
GE YD
Sbjct: 264 GEHYD 268
>gi|379705417|ref|YP_005203876.1| homocysteine methyltransferase [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682116|gb|AEZ62405.1| homocysteine methyltransferase [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 314
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 151/303 (49%), Gaps = 60/303 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + + H D++++GADIV T+SYQA++
Sbjct: 15 ILDGALGTELENRGHDV--SGKLWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + YG S
Sbjct: 73 QGLED--------------------------------------------------YGLSE 82
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
++ + VE A W L D+ + + LIAG VGPY A L DGSEY GDY
Sbjct: 83 KEALDTIALTVELAKNARQNFWQSLSDDEKKKRVYPLIAGDVGPYAAYLADGSEYTGDY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
+S+ + ++HR RIQ L+ AG+D LAIETIP EA L LL E+P +A++SF+
Sbjct: 142 -QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVELLADEFPDTEAYMSFTA 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+D + IS+G T+VA+ C + Q++A G+NC RP ++S L++ +T PLV YPN
Sbjct: 201 QDSQSISDGTLMTEVAKLCDSSK--QILAFGINCSRPAIISDLLKASRTISQKPLVTYPN 258
Query: 302 SGE 304
SGE
Sbjct: 259 SGE 261
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 402 KHRLDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG--SQTNDFLRDY 458
K R+ ++G + Y + DG Y L+ K++ HR I+ + +DFL
Sbjct: 113 KKRVYPLIAGDVGPYAAYLADGSEYTGDYQLS--KESFKDFHRSRIQTLLAAGSDFLAIE 170
Query: 459 NSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGE 518
PN+ E ALV + + +M D + IS+G
Sbjct: 171 TIPNM------------------TEATALVELLADEFPDTEAYMSFTAQD--SQSISDGT 210
Query: 519 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
T+VA+ C + Q++A G+NC RP ++S L++ +T PLV YPNSGE YD
Sbjct: 211 LMTEVAKLCDSSK--QILAFGINCSRPAIISDLLKASRTISQKPLVTYPNSGEIYD 264
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 59/156 (37%), Gaps = 56/156 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-TENI--------------- 344
+G LAIETIP EA L LL E+P+ +A++SF+ + +++I
Sbjct: 162 AGSDFLAIETIPNMTEATALVELLADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLCDS 221
Query: 345 ------------------------------PLVVYPNSGERYDAVNARWI-----DRDLC 369
PLV YPNSGE YD W LC
Sbjct: 222 SKQILAFGINCSRPAIISDLLKASRTISQKPLVTYPNSGEIYDGATQTWKSLPDNSHTLC 281
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
E W +VGGCCRT ED + +L
Sbjct: 282 ENSQV----WHKLSAKIVGGCCRTRPEDIKLLADKL 313
>gi|339998354|ref|YP_004729237.1| homocysteine s-methyltransferase [Salmonella bongori NCTC 12419]
gi|339511715|emb|CCC29424.1| homocysteine s-methyltransferase [Salmonella bongori NCTC 12419]
Length = 311
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 171/399 (42%), Gaps = 111/399 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + H D+ +AGA V+T SYQA+
Sbjct: 18 LLDGAMATELEARGCDLSDS--LWSAKVLLEKPALIRDVHLDYFRAGAQCVITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + L + LI SV+ ++A
Sbjct: 76 DG-LAARGLSKAQATSLIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +LIAGS+GPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLIAGSIGPYGAFLADGSEYRGDYAR- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +HRPR++AL++AGAD+LA ET+P E Q L LL +P +AW SF+ +D
Sbjct: 142 -TPEQFQAFHRPRVEALLDAGADLLACETLPNFVEIQALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
KH+S+G +V C N P Q++A+G+NC+ ++ ++ L +PLVVYPNSGE
Sbjct: 201 KHLSDGTPLLEVT-ACLNHYP-QVVAIGINCIALENATAALQHLYGLTTLPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD + W
Sbjct: 259 --------------------------------------------------QYDVASKVWR 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
+ C + ++ W G L+GGCCRT D +K
Sbjct: 269 HHGETCARLADHLPQWWAAGARLMGGCCRTTPADIAGLK 307
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D KH+S+G +V C N P Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSKHLSDGTPLLEVT-ACLNHYP-QVVAIGINCIALENATAALQHLYGLTTLPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|256592586|gb|ACV03423.1| selenocysteine methyltransferase-like protein [Astragalus
drummondii]
Length = 337
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 191/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG +++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIGGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGSVG YGA L DGSEY G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEYSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSF 240
Y + + T+ ++HR R+Q L ++G D+LA E +P EAQ LL E AW +F
Sbjct: 152 YGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD ++ +G+S + +A +C D+++AVG+NC P + LI LK P+
Sbjct: 212 NSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPI 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE I +EW
Sbjct: 267 VIYPNSGETYDGIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 ---NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+Y
Sbjct: 215 DGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|359479663|ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
Length = 335
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 179/397 (45%), Gaps = 110/397 (27%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V +IDGG +++L + D+ D PLWS+ L ++ + H D+++AGADI++T SY
Sbjct: 20 GGVAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDYLEAGADIIITASY 77
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+I GF E S L++ SV+ IA EA
Sbjct: 78 QATIQGF-EARGFSRGESEALLRKSVE-----IACEA----------------------- 108
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
R Y + + R++ P IL+A SVG YGA L DGSEY G
Sbjct: 109 ----------RKMYYDR--------YGRILKHRP---ILVAASVGSYGAYLADGSEYSGI 147
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + ++ T+ ++HR R+Q L +AGAD++A ET+P EAQ LL E + AW SF
Sbjct: 148 YGDEITVETLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSF 207
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
+ KD H+ +G+S + +A +C ++++VG+NC P + LI + K P+
Sbjct: 208 NSKDGVHVVSGDSLLECVSIAESC-----KKVVSVGINCTPPRFIHGLILSIKKVTTKPI 262
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE P QK W+ + +
Sbjct: 263 LIYPNSGESY---------------------DPEQKEWVQKTGVS--------------- 286
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
E YV W + G +LVGGCCRT
Sbjct: 287 ------------VEDFVSYVNKWCEVGASLVGGCCRT 311
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIP 561
+ D H+ +G+S + +A +C ++++VG+NC P + LI +K P
Sbjct: 207 FNSKDGVHVVSGDSLLECVSIAESC-----KKVVSVGINCTPPRFIHGLILSIKKVTTKP 261
Query: 562 LVVYPNSGERYD 573
+++YPNSGE YD
Sbjct: 262 ILIYPNSGESYD 273
>gi|58426147|gb|AAW75184.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 352
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 172/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 52 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 109
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 110 LGFAAR-GLDVAQSQALIARSVELAVQA-------------------------------- 136
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ H W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 137 ------RADHL-HAQPQAAPLW-------------VAGSVGPYGAYLADGSEYRGDYVLP 176
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+++ + ++HRPRI AL +AG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 177 IAQ--LMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLLQSEFPQLHAWFSFTLRD 234
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ V++ + L +PLVVYPNSG
Sbjct: 235 AAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNSG 292
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH Y S +R+ A +A
Sbjct: 293 EH-------------------------------------------YDASDKRWHAGHASA 309
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ D++ WL G L+GGCCRT D
Sbjct: 310 LTL-----ADQH-AHWLAAGARLIGGCCRTTPRD 337
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ V+ + L +PLVVYPNS
Sbjct: 234 DAAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNS 291
Query: 569 GERYD 573
GE YD
Sbjct: 292 GEHYD 296
>gi|313894915|ref|ZP_07828475.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976596|gb|EFR42051.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
Length = 332
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 156/306 (50%), Gaps = 36/306 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
++N+ ++DG F+++L + D LWS+ + D V H D+++AGADIV + S
Sbjct: 10 VSNILVLDGAFATELEARGFSVNDA--LWSAKAIFERPDLVRDVHLDYLRAGADIVTSAS 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA++ GF++ + + LI SV+ +EA RDI S+
Sbjct: 68 YQATVEGFVK-KGFTEEQAAALIVRSVELAREA----------------RDIYCLESLA- 109
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
EY E T R A L+A SVGPYGA L DGSEYRG
Sbjct: 110 --------DEYHAQEESTREEQTSCSSDRREKSGGAP--LVAASVGPYGAYLADGSEYRG 159
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLS 239
DY V+E T++ +H R+ L E D+LA ET+P EAQ + R LRE + AW S
Sbjct: 160 DY--GVNEETLSAFHAERLVLLAEGQPDLLACETLPCLTEAQAIVRALREKEIRIPAWFS 217
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVV 298
FSC+D HIS+G T AR + + AVGVNC P V LI ++ E + P+VV
Sbjct: 218 FSCRDGAHISDGTPITDCAR--FLDTVPEAAAVGVNCTAPQYVEDLIHAIRRETDKPVVV 275
Query: 299 YPNSGE 304
YPNSGE
Sbjct: 276 YPNSGE 281
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 54/149 (36%), Gaps = 49/149 (32%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCK-------------- 340
LV+ +LA ET+P EAQ + R LRE + AW SFSC+
Sbjct: 176 LVLLAEGQPDLLACETLPCLTEAQAIVRALREKEIRIPAWFSFSCRDGAHISDGTPITDC 235
Query: 341 ----------------------TENI----------PLVVYPNSGERYDAVNARWIDRDL 368
E++ P+VVYPNSGE Y + W
Sbjct: 236 ARFLDTVPEAAAVGVNCTAPQYVEDLIHAIRRETDKPVVVYPNSGEDYSVSDKSW--HGT 293
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E W G ++GGCCRT D
Sbjct: 294 AEDFAAGARRWRTAGARIIGGCCRTSPRD 322
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G T AR + + AVGVNC P V LI ++ E + P+VVYPNS
Sbjct: 222 DGAHISDGTPITDCAR--FLDTVPEAAAVGVNCTAPQYVEDLIHAIRRETDKPVVVYPNS 279
Query: 569 GERY 572
GE Y
Sbjct: 280 GEDY 283
>gi|334306355|sp|A4ZGQ8.1|HMT1_BRAOT RecName: Full=Homocysteine S-methyltransferase 1; Short=BoHMT1
gi|110468086|gb|ABG74913.1| homocysteine methyltransferase 1 [Brassica oleracea var. italica]
Length = 326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 174/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGAD+V+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV EA
Sbjct: 80 PGFLS-RGLSMEESESLLQKSVKLAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + VS+ + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 107 ------RDRFWDKVSKTSGHSYNR---------ALVAASIGSYGAYLADGSEYSGSYGED 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR RIQ LVEA D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLEEENVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
++ +GESF + T N + AVG+NC P + +LI + K +VVYPNSG
Sbjct: 212 GENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLIRKFSKLTQKAIVVYPNSG 269
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C
Sbjct: 270 EV----------------------WDGKAKKWLPSQC----------------------- 284
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ D + + + T W D G L+GGCCRT
Sbjct: 285 FGDAEF----EMFATKWRDLGAKLIGGCCRT 311
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D ++ +GESF + T N + AVG+NC P + LI + K +VVYPNS
Sbjct: 211 DGENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLIRKFSKLTQKAIVVYPNS 268
Query: 569 GERYD 573
GE +D
Sbjct: 269 GEVWD 273
>gi|161898998|ref|YP_200569.2| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|188577204|ref|YP_001914133.1| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521656|gb|ACD59601.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 325
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 172/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 83 LGFAA-RGLDVAQSQALIARSVELAVQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ H W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 110 ------RADHL-HAQPQAAPLW-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+++ + ++HRPRI AL +AG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IAQ--LMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLLQSEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ V++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH Y S +R+ A +A
Sbjct: 266 EH-------------------------------------------YDASDKRWHAGHASA 282
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ D++ WL G L+GGCCRT D
Sbjct: 283 LTL-----ADQH-AHWLAAGARLIGGCCRTTPRD 310
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ V+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|84623485|ref|YP_450857.1| homocysteine methyltransferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367425|dbj|BAE68583.1| homocysteine S-methyltransferase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 325
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 172/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 LLDGALATELEHRGCDLNDA--LWSARVLIEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 83 LGFAAR-GLDVAQSQALIARSVELAVQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ H W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 110 ------RADHL-HAQPQAAPLW-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+++ + ++HRPRI AL +AG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IAQ--LMDFHRPRIAALADAGVDVLACETLPSASEIVALRQLLQSEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ V++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH Y S +R+ A +A
Sbjct: 266 EH-------------------------------------------YDASDKRWHAGHASG 282
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ D++ WL G L+GGCCRT D
Sbjct: 283 LTL-----ADQH-AHWLAAGARLIGGCCRTTPRD 310
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ V+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACT--QVIAVGINCIALDQVTAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|407478612|ref|YP_006792489.1| Homocysteine S-methyltransferase [Exiguobacterium antarcticum B7]
gi|407062691|gb|AFS71881.1| Homocysteine S-methyltransferase [Exiguobacterium antarcticum B7]
Length = 310
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 172/401 (42%), Gaps = 113/401 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + + H D+ K GA
Sbjct: 19 LLDGALATELERHGSNLED--PLWSARVLLEEPEQIHRVHTDYFKIGA------------ 64
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
D SSYQ ++ +R +D A +++
Sbjct: 65 -------DCAITSSYQ------------ASVAGFSSRGIKEDEAIELM------------ 93
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+A+ R T A LIAGSVGPYGA L DGSEY G Y
Sbjct: 94 -------------KQTVYLAQQARAETGQAASHALIAGSVGPYGAYLSDGSEYVGHY--G 138
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V +A + +HRPR++AL+ AGAD+LA ETIP+ +EA++L RLL E+P Q AWL+FS ++
Sbjct: 139 VDDAQLEAFHRPRLEALIAAGADVLAFETIPSLQEAKVLFRLLEEFPEQSAWLAFSLRNA 198
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
HIS G ++ + +P QL A+G NC + + I LK ++P++VYPNSGE
Sbjct: 199 THISEGTPLSECIESL-GEHP-QLAAIGANCFPASIATDFITTLKQLTDVPIIVYPNSGE 256
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD V+ W
Sbjct: 257 --------------------------------------------------QYDPVSKTWS 266
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+C + +W G L+GGCCRT E ++ ++
Sbjct: 267 GEAVCTAFEDVAPEWYAAGARLIGGCCRTTPEQIERIQQKV 307
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 513 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGER 571
HIS G ++ + +P QL A+G NC + + I LK ++P++VYPNSGE+
Sbjct: 200 HISEGTPLSECIESL-GEHP-QLAAIGANCFPASIATDFITTLKQLTDVPIIVYPNSGEQ 257
Query: 572 YD 573
YD
Sbjct: 258 YD 259
>gi|297821248|ref|XP_002878507.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis lyrata subsp.
lyrata]
gi|297324345|gb|EFH54766.1| homocysteine S-methyltransferase AtHMT-2 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 182/406 (44%), Gaps = 105/406 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++ + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L++ SV+ IA EA
Sbjct: 79 QGF-EAKGFSREISESLLRKSVE-----IACEA--------------------------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + ++ + L R IL+A SVG YGA L DGSEY G Y +
Sbjct: 106 ------RNTYYDKCGTSSSMDDKIL----KKRPILVAASVGSYGAYLADGSEYSGVYGDL 155
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L E+GAD++A ETIP EAQ LL E + W SF+ KD
Sbjct: 156 ITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFAELLEEGDVKIPGWFSFNSKD 215
Query: 245 DKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPN 301
++ +G+S + C ++ N ++++AVG+NC P + L+ ++ K + P++VYPN
Sbjct: 216 GVNVVSGDSIKE----CISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPN 271
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YDA
Sbjct: 272 SGES--------------------------------------------------YDADRK 281
Query: 362 RWIDRDLC--EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W++ E YV W+D GV+L+GGCCRT + RL
Sbjct: 282 EWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 327
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYDFHLADEK 580
N ++++AVG+NC P + L+ ++ K + P++VYPNSGE YD AD K
Sbjct: 234 NCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYD---ADRK 281
>gi|119962403|ref|YP_948790.1| homocysteine methyltransferase [Arthrobacter aurescens TC1]
gi|119949262|gb|ABM08173.1| homocysteine S-methyltransferase [Arthrobacter aurescens TC1]
Length = 317
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 173/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ D PLWS+ L + Q HRD+ AGA + +T SYQA+
Sbjct: 18 VLDGALATELEAHGCDLED--PLWSAKVLLEQPHLIKQVHRDYFDAGASVAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV-GPYGAS 124
GF L + S +L+ SV EA R+ L G+ GP
Sbjct: 76 QGFAR-RGLGAEESLELVALSVRLADEA---------------RREALADGTANGP---- 115
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
+L+AGSVGPYGA L DGSEYRGDY
Sbjct: 116 ----------------------------------LLVAGSVGPYGAYLADGSEYRGDYT- 140
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+S A ++HRPRI ALVE GAD LA ET+P+ EA+ L L+ E+ ++W +F+ +D
Sbjct: 141 -LSAAEFRDFHRPRIAALVETGADFLACETLPSYAEAEALVALVAEF-DVESWFTFTLRD 198
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
HIS+G VA + P ++ AVGVNCV +V+ + L + N PLV YPNSG
Sbjct: 199 SGHISDGTPIGDVA-VLLSAEP-RVTAVGVNCVPLELVTDALGTLHRFSNKPLVAYPNSG 256
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W P++G + A
Sbjct: 257 ESYDAV---------------------TKTW--------------APSAGVQGSGTLA-- 279
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DW D G L+GGCCRT D
Sbjct: 280 ----------GNAPDWQDRGARLIGGCCRTTPRD 303
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G VA + P ++ AVGVNCV +V+ + L + N PLV YPNS
Sbjct: 198 DSGHISDGTPIGDVA-VLLSAEP-RVTAVGVNCVPLELVTDALGTLHRFSNKPLVAYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GESYD 260
>gi|297814814|ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
gi|297321128|gb|EFH51549.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
Length = 326
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 173/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGADIV+T+SYQA+I
Sbjct: 22 VVDGGFATQLENHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV EA
Sbjct: 80 PGFLS-RGLAIEESESLLQKSVQLAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + VS+ + ++R L+A S+G YGA L DGSEY G Y E+
Sbjct: 107 ------RDRFWDKVSKVSGHSYNR---------ALVAASIGSYGAYLADGSEYSGYYGEN 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ +GESF + N + AVG+NC P + +LI + K +VVYPNSG
Sbjct: 212 GEKAPSGESFEECLEALNKSN--NIYAVGINCAPPQFIENLICKFAKLTKKAIVVYPNSG 269
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C ++
Sbjct: 270 EV----------------------WDGKAKQWLPSQCFGDD------------------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + T W D G L+GGCCRT
Sbjct: 289 --------EFEMFATKWRDLGAKLIGGCCRT 311
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D + +GESF + N + AVG+NC P + LI + K +VVYPNS
Sbjct: 211 DGEKAPSGESFEECLEALNKSN--NIYAVGINCAPPQFIENLICKFAKLTKKAIVVYPNS 268
Query: 569 GERYD 573
GE +D
Sbjct: 269 GEVWD 273
>gi|6094303|sp|P56707.1|SMTA_ASTBI RecName: Full=Selenocysteine methyltransferase; Short=SECYS-MT;
Short=SECYS-methyltransferase
gi|4006848|emb|CAA10368.1| selenocysteine methyltransferase [Astragalus bisulcatus]
Length = 338
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 190/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG ++L + D+ D PLWS+ L + + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGSVG YGA L DGSE+ G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEFSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSF 240
Y + + T+ ++HR ++Q L ++G D+LA E +P EAQ LL E AW +F
Sbjct: 152 YGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD ++ +G+S + +A +C D+++AVG+NC P + LI LK P+
Sbjct: 212 TSKDGNNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPI 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE AI +EW
Sbjct: 267 VIYPNSGETYDAIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 ---NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+Y
Sbjct: 215 DGNNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|21242145|ref|NP_641727.1| homocysteine methyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21107558|gb|AAM36263.1| homocysteine S-methyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 321
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 173/395 (43%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAMQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R + WL G L+GGCCRT D
Sbjct: 276 HAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|168002076|ref|XP_001753740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695147|gb|EDQ81492.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 350
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 172/394 (43%), Gaps = 104/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGGF++QL + +I D PLWS+ L T D + + HR++++AGA ++ T SYQA+I
Sbjct: 33 VTDGGFATQLERHGANIND--PLWSAVCLITMPDLIRKVHREYLEAGAAVISTASYQATI 90
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L S L++ SV +E RD
Sbjct: 91 QGF-EMRGLSTKDSEDLLQLSVRIAREE----------------RD-------------- 119
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R EY+ H +H L+A S+G YGA L DGSEY GDY
Sbjct: 120 RFWKEYQNKV--HTGPGQAGSYHH---------ALVAASIGSYGAYLADGSEYSGDYGSF 168
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ + +HR R+ L +AG D+LA ETIP E Q L LL E + AW++ + KD
Sbjct: 169 VTVEKLKNFHRRRLLVLADAGPDLLAFETIPCKLEIQALVELLDEEKIRIPAWVALNSKD 228
Query: 245 DKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
++ NG+S T C + N +++AVG+NC P + LI K + P++VYPN
Sbjct: 229 GVNVVNGDSLTD----CVGLLDNCTKVVAVGINCTPPRFILDLIRVARKVTSKPIMVYPN 284
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV
Sbjct: 285 SGEH--------------------------------------------------YDAVIK 294
Query: 362 RWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
+W++ D +V +W G L+GGCCRT
Sbjct: 295 QWVECKGSTDTDFVSHVQEWRKAGAQLIGGCCRT 328
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 506 LDDWDDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPL 562
L+ D ++ NG+S T C + N +++AVG+NC P + LI K + P+
Sbjct: 224 LNSKDGVNVVNGDSLTD----CVGLLDNCTKVVAVGINCTPPRFILDLIRVARKVTSKPI 279
Query: 563 VVYPNSGERYD 573
+VYPNSGE YD
Sbjct: 280 MVYPNSGEHYD 290
>gi|125717926|ref|YP_001035059.1| homocysteine methyltransferase [Streptococcus sanguinis SK36]
gi|125497843|gb|ABN44509.1| Methyltransferase, putative [Streptococcus sanguinis SK36]
Length = 315
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 181/408 (44%), Gaps = 109/408 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESLGYDV--SGKLWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + SY L+K +V ++A +E T
Sbjct: 71 SIPAFVE-AGLTPEKSYDLLKETVFLARKA--IENT------------------------ 103
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARD--ILIAGSVGPYGASLRDGSEYRGD 181
W L ++ + +L+AGSVGPY A L DGSEY GD
Sbjct: 104 -----------------------WQALSPEEKNQRPRLLVAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP EA+ + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEEEFQDFHRPRIQALLEAGSDLLAIETIPNGAEAEAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVY 299
+ + IS+G ++ Q++ VG NC P +++ L++ L+ N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLTVGFNCTAPHLIAPLLDGLRQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE L ++ P Q+ L + K ++ N G R
Sbjct: 257 PNSGETY------------NGLTKIWHNDPEQERSLLENSK-------LWQNQGVR---- 293
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
L GGCCRT ED + L D
Sbjct: 294 --------------------------LFGGCCRTQPEDIAQLARGLKD 315
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
Q++ VG NC P +++PL++ L+ N P + YPNSGE Y+
Sbjct: 224 QVLTVGFNCTAPHLIAPLLDGLRQVCNKPFLTYPNSGETYN 264
>gi|357131066|ref|XP_003567164.1| PREDICTED: homocysteine S-methyltransferase 4-like [Brachypodium
distachyon]
Length = 359
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 182/394 (46%), Gaps = 101/394 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + D+ D LWS+ L +A + + H D+++AGA+I+ T SYQA++
Sbjct: 26 VLDGALGTELEAHGADLQD--ELWSASCLVSAPHIIRKVHLDYLEAGANIITTASYQATL 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG-SVGPYGAS 124
GF + L + S L++ SV+ +EA R I + G S GPY
Sbjct: 84 QGF-QSRGLSSEQSETLLRRSVEIAQEA----------------RAIFVEGRSKGPYAGR 126
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
DGS R R +L+A SVG YGA L DGSEY GDY
Sbjct: 127 ENDGSRER------------------------RPVLVAASVGSYGAYLADGSEYTGDYGR 162
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
V++ + +HR R+Q L +AG D++A ETIP EAQ LL E + AW SF+ K
Sbjct: 163 SVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEAQAYSELLEENDIRIPAWFSFTSK 222
Query: 244 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
D + ++G+ T+ VA +C ++ +VG+NC P ++ LI + K + +VVY
Sbjct: 223 DGANAASGDPITECAAVADSCR-----RVASVGINCTAPGLIHGLILSIRKVTSKAIVVY 277
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE +A ET +EW D+
Sbjct: 278 PNSGETYVA-ET--------------KEW---------------------------VDSA 295
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
A D V K W + G ++VGGCCRT
Sbjct: 296 GASGTT-DFASCVGK----WREAGASVVGGCCRT 324
>gi|289662875|ref|ZP_06484456.1| homocysteine methyltransferase [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 321
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 163/395 (41%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLND--TLWSARVLMEQPQLIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 83 LGFAAR-GLDVAQSQALIARSVELAVQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ H W + GSVGPYGA L DGSEYRGDYV
Sbjct: 110 ------RADHL-HAQPQAAPLW-------------VVGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
V + + ++HRPRI AL EAG D+LA ET+PA+ E L RLL+ E+P AW SF+ +D
Sbjct: 150 VEQ--LMDFHRPRIAALAEAGVDLLACETLPAAGEIVALRRLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IA+G+NC+ V+ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACT--QVIAIGINCIALDQVTDALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ WL G LVGGCCRT D
Sbjct: 276 HAGHGTALTLADQHAQWLAAGARLVGGCCRTTPRD 310
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IA+G+NC+ V+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACT--QVIAIGINCIALDQVTDALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|401682974|ref|ZP_10814863.1| homocysteine S-methyltransferase [Streptococcus sp. AS14]
gi|422823652|ref|ZP_16871840.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK405]
gi|422826276|ref|ZP_16874455.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK678]
gi|422855586|ref|ZP_16902244.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1]
gi|422865561|ref|ZP_16912186.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1058]
gi|324992979|gb|EGC24899.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK405]
gi|324995712|gb|EGC27624.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK678]
gi|327462275|gb|EGF08602.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1]
gi|327489628|gb|EGF21420.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1058]
gi|400183656|gb|EJO17907.1| homocysteine S-methyltransferase [Streptococcus sp. AS14]
Length = 315
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 180/411 (43%), Gaps = 119/411 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + +G + G LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELES-LGYDVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++A
Sbjct: 71 SIPAFIE-AGLTPEKGYNLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY GD
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPYPLVAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEEEFRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDVLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D R L E W ++GV L GGCCRT ED + L
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQEQGVQLFGGCCRTRPEDIAQLARGL 313
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDVLGQVCNKPFLTYPNSGETYN 264
>gi|300917137|ref|ZP_07133826.1| homocysteine S-methyltransferase, partial [Escherichia coli MS
115-1]
gi|300415614|gb|EFJ98924.1| homocysteine S-methyltransferase [Escherichia coli MS 115-1]
Length = 291
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 153/308 (49%), Gaps = 60/308 (19%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIRKVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAA-RGLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V + Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDV--VAFLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAI 309
SGEH A+
Sbjct: 256 SGEHYDAV 263
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 47/130 (36%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
++G +LA ET+P E + L LL +P +AW SF+ +
Sbjct: 159 DAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVAFLAG 218
Query: 341 -------------TEN-------------IPLVVYPNSGERYDAVNARWIDR-DLCEPVD 373
EN +PLVVYPNSGE YDAV+ W + C +
Sbjct: 219 YPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLA 278
Query: 374 KYVTDWLDEG 383
Y+ W G
Sbjct: 279 DYLPQWQGAG 288
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V + Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDV--VAFLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|256592588|gb|ACV03424.1| selenocysteine methyltransferase [Astragalus leptocarpus]
Length = 337
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 187/407 (45%), Gaps = 105/407 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG +++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L++ SV +EA RD+
Sbjct: 76 QGF-KAKGFSGEEGEALLRRSVGIAREA----------------RDL------------- 105
Query: 126 RDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
Y + +E++ + R++ P ILIAGSVG YGA L DGSEY G+Y
Sbjct: 106 ---------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEYSGNYG 153
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSC 242
+ + T+ ++HR R+Q L ++G D+LA E +P EAQ LL E AW +F+
Sbjct: 154 DAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAFNS 213
Query: 243 KDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVV 298
KD ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+
Sbjct: 214 KDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVI 268
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE I +EW
Sbjct: 269 YPNSGETYDGIR---------------KEWGQ---------------------------- 285
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 -NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+Y
Sbjct: 215 DGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|171778308|ref|ZP_02919514.1| hypothetical protein STRINF_00356 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283008|gb|EDT48432.1| homocysteine S-methyltransferase [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 314
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 151/303 (49%), Gaps = 60/303 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + + H D++++GADIV T+SYQA++
Sbjct: 15 ILDGALGTELENRGHDV--SGKLWSAKYLLENPQIIQELHEDYLRSGADIVTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + YG S
Sbjct: 73 QGLED--------------------------------------------------YGLSE 82
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
++ + VE A W L D+ + + LIAG VGPY A L DGSEY GDY
Sbjct: 83 KEALDTIVLTVELAKNARQNFWQSLSDDEKKKRVYPLIAGDVGPYAAYLADGSEYTGDY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
+S+ + ++HR RIQ L+ AG+D LAIETIP EA L LL E+P +A++SF+
Sbjct: 142 -QLSKESFKDFHRSRIQTLLAAGSDFLAIETIPNMTEATALVELLADEFPDTEAYMSFTA 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+D + IS+G T+VA+ C + Q++A G+NC RP ++S L++ +T PLV YPN
Sbjct: 201 QDSQSISDGTLMTEVAKLCDSSK--QILAFGINCSRPAIISDLLKASRTISQKPLVTYPN 258
Query: 302 SGE 304
SGE
Sbjct: 259 SGE 261
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 402 KHRLDDWVSG-LSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKG--SQTNDFLRDY 458
K R+ ++G + Y + DG Y L+ K++ HR I+ + +DFL
Sbjct: 113 KKRVYPLIAGDVGPYAAYLADGSEYTGDYQLS--KESFKDFHRSRIQTLLAAGSDFLAIE 170
Query: 459 NSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGE 518
PN+ E ALV + + +M D + IS+G
Sbjct: 171 TIPNM------------------TEATALVELLADEFPDTEAYMSFTAQD--SQSISDGT 210
Query: 519 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
T+VA+ C + Q++A G+NC RP ++S L++ +T PLV YPNSGE YD
Sbjct: 211 LMTEVAKLCDSSK--QILAFGINCSRPAIISDLLKASRTISQKPLVTYPNSGEIYD 264
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 60/156 (38%), Gaps = 56/156 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-TENI--------------- 344
+G LAIETIP EA L LL E+P+ +A++SF+ + +++I
Sbjct: 162 AGSDFLAIETIPNMTEATALVELLADEFPDTEAYMSFTAQDSQSISDGTLMTEVAKLCDS 221
Query: 345 ------------------------------PLVVYPNSGERYDAVNARWI-----DRDLC 369
PLV YPNSGE YD W LC
Sbjct: 222 SKQILAFGINCSRPAIISDLLKASRTISQKPLVTYPNSGEIYDGATQTWKSLPDNSHTLC 281
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
E W G +VGGCCRT ED + +L
Sbjct: 282 ENSQV----WHKLGAKIVGGCCRTRPEDIKLLADKL 313
>gi|380511746|ref|ZP_09855153.1| homocysteine methyltransferase [Xanthomonas sacchari NCPPB 4393]
Length = 312
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 176/401 (43%), Gaps = 109/401 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L D + Q HRD+ AGA +T SYQA+
Sbjct: 17 VLDGALATELERRGCDLRD--PLWSAKILLEQPDLIRQLHRDYFAAGAQCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +D + +LI SV+ +A +A A + A GP
Sbjct: 75 QGVAAR-GIDLVQAQRLIARSVE-----LAQQARQAHLARHPQA---------GP----- 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+AGSVGPYGA L DGSEYRGDY
Sbjct: 115 ---------------------------------LLVAGSVGPYGAYLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +A + ++HRPRI LVEAG D+L ET P+ E L +L +P AW + + +D
Sbjct: 140 LPQAALRDFHRPRIAVLVEAGVDLLTCETQPSLVEMVALLEVLEAFPQTVAWFTCTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G +V + +P Q++A+GVNCV P + + + L T +PLVVYPN+GE
Sbjct: 200 THLSDGTPLREVV-ALLDGHP-QVVALGVNCVAPSLATVALRHLATLTRVPLVVYPNAGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
R ++K W + S ++G D
Sbjct: 258 ---------------------RYDADRKCWQAGSA-----------DAGALAD------- 278
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
++T W G L+GGCCRT +D + RL
Sbjct: 279 ----------HLTAWRAAGARLIGGCCRTTPQDIAQLAQRL 309
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G +V + +P Q++A+GVNCV P + + + L T +PLVVYPN+
Sbjct: 198 DATHLSDGTPLREVV-ALLDGHP-QVVALGVNCVAPSLATVALRHLATLTRVPLVVYPNA 255
Query: 569 GERYDFHLADEK 580
GERYD AD K
Sbjct: 256 GERYD---ADRK 264
>gi|198423756|ref|XP_002127286.1| PREDICTED: similar to CG10623 CG10623-PA [Ciona intestinalis]
Length = 305
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 68/309 (22%)
Query: 1 MANVKLIDGGFSSQL---STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVM 57
M ++K++DGG + L +V ++ PLWS+ L + +++ H FIKAG+D+V
Sbjct: 1 MEDIKILDGGLCTDLFINGGFVRAEVNKDPLWSARVLYEKPEEIMKAHLRFIKAGSDVVS 60
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
T SYQAS+ G+ME HA++ + + I
Sbjct: 61 TCSYQASVQGYME-----------------------------HAQVTKEKAEKII----- 86
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
G V+ +A + R +L+AGS+ PYGA L D SE
Sbjct: 87 ---------------GSSVDVAKQAV---------QESGRRVLVAGSISPYGAILHDMSE 122
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237
Y G Y++ SE ++++H+ I+ L G D+ A ET+P+ KEA +L +LRE+P KAW
Sbjct: 123 YTGSYIDTTSEQQLSDFHKTNIRILASKGVDLFAFETLPSLKEALVLAEILREYPTLKAW 182
Query: 238 LSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP-- 295
+SFS K+ H GE F +V + N + Q+IA+G+NC + +SS I QL N+
Sbjct: 183 VSFSNKNGTHTCYGEPFEEVFKALGNYH--QIIAIGLNCCKSETISSFI-QLAHGNLAKH 239
Query: 296 --LVVYPNS 302
L++YPN+
Sbjct: 240 QRLIIYPNN 248
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 62/164 (37%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------------------- 338
+ + G + A ET+P+ KEA +L +LRE+P KAW+SFS
Sbjct: 146 ILASKGVDLFAFETLPSLKEALVLAEILREYPTLKAWVSFSNKNGTHTCYGEPFEEVFKA 205
Query: 339 --------------CKTENIP---------------LVVYPN--SGERYDAVNA--RWID 365
CK+E I L++YPN +G ++ A W+
Sbjct: 206 LGNYHQIIAIGLNCCKSETISSFIQLAHGNLAKHQRLIIYPNNCAGGNVNSSEAPLEWLP 265
Query: 366 RDLCEPVDKYVTDWLDEG-VALVGGCCRTYAEDTLHMKHRLDDW 408
+ V WL+ + +GGCC T +K + +W
Sbjct: 266 K---------VKTWLESNLIGWIGGCCMTSPFQIGQIKQAVMEW 300
>gi|422860215|ref|ZP_16906859.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK330]
gi|327470113|gb|EGF15577.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK330]
Length = 315
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 177/407 (43%), Gaps = 119/407 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESRGYDV--SGKLWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++AI
Sbjct: 71 SIPAFIE-AGLTPEKGYDLLKETVFLAQKAI----------------------------- 100
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
E+V W L ++ + L+AGSVGPY A L DGSEY G+
Sbjct: 101 -------------ENV-------WQELSPEEQKQRSYPLVAGSVGPYAAYLADGSEYTGN 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SEA E+H PRIQAL+EAG+D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEAEFREFHCPRIQALLEAGSDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDALGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W D R L E W ++GV L GGCCRT ED +
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQNQGVRLFGGCCRTRPEDIAQL 309
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDALGQVCNKPFLTYPNSGETYN 264
>gi|256592580|gb|ACV03420.1| selenocysteine methyltransferase [Astragalus racemosus]
Length = 338
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 190/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG ++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 IIAGGLGTELGRHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGSVG YGA L DGSE+ G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEFSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPH-QKAWLSF 240
Y + + T+ ++HR ++Q L ++G D+LA E +P EAQ LL E AW +F
Sbjct: 152 YGDAIKLETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENMITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD ++ +G+S + +A +C D+++AVG+NC P + LI LK P+
Sbjct: 212 NSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPI 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE I +EW
Sbjct: 267 VIYPNSGETYDGIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 ---NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+Y
Sbjct: 215 DGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|289670250|ref|ZP_06491325.1| homocysteine methyltransferase [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 321
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 163/395 (41%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLND--TLWSARVLMEQPQLIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ +A
Sbjct: 83 LGFAAR-GLDVAQSQALIARSVELAVQA-------------------------------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D++ H W + GSVGPYGA L DGSEYRGDYV
Sbjct: 110 ------RADHL-HAQPQAAPLW-------------VVGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
V + + ++HRPRI +L EAG D+LA ET+PA+ E L RLL+ E+P AW SF+ +D
Sbjct: 150 VEQ--LMDFHRPRIASLAEAGVDLLACETLPAAGEIVALRRLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IA+G+NC+ V+ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACT--QVIAIGINCIALDQVTDALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ WL G LVGGCCRT D
Sbjct: 276 HAGHGTALTLADQHAQWLAAGARLVGGCCRTTPRD 310
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IA+G+NC+ V+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACT--QVIAIGINCIALDQVTDALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|260881752|ref|ZP_05405152.2| homocysteine S-methyltransferase [Mitsuokella multacida DSM 20544]
gi|260848320|gb|EEX68327.1| homocysteine S-methyltransferase [Mitsuokella multacida DSM 20544]
Length = 315
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 165/393 (41%), Gaps = 109/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG F ++L+ D D LWS+ L + V HRD+ +AGADI + SYQA++
Sbjct: 18 VLDGAFGTELARRGFDTND--ELWSAKALFEKPELVEAVHRDYYEAGADISTSASYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + +LI SV V++ ARD
Sbjct: 76 EGF-EKKGFTREQAKELIVRSVRLVQQ----------------ARD-------------- 104
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A W + L A SVGPYGA L DGSEYRGDY
Sbjct: 105 -------------------AFWQQRAKRVGRPQPLAAASVGPYGAYLADGSEYRGDY--G 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
S A +A++H R+ LV AG DILA ET+P EA+ + LR +P AW+SFSCKD
Sbjct: 144 ASRAELADFHAERLAILVSAGPDILACETLPLLDEARAILDDLRRYPDAGAWISFSCKDA 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
+H G++ AR + Q+ A+GVNC P V+ LI ++ P+VVYPN+GE
Sbjct: 204 EHTCGGDAIADCARLLDKES--QVAAIGVNCTAPQYVADLIRNIRAHTAKPVVVYPNTGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YDAV W
Sbjct: 262 T--------------------------------------------------YDAVTKTW- 270
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
P +V W + G L+GGCCRT +D
Sbjct: 271 -HGSPTPYHDFVRQWYEAGARLIGGCCRTTPDD 302
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H G++ AR + Q+ A+GVNC P V+ LI ++ P+VVYPN+
Sbjct: 202 DAEHTCGGDAIADCARLLDKES--QVAAIGVNCTAPQYVADLIRNIRAHTAKPVVVYPNT 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GETYD 264
>gi|256592584|gb|ACV03422.1| selenocysteine methyltransferase [Astragalus ceramicus]
Length = 337
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 190/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG +++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIAGGLATELERHGADLND--PLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGSVG YGA L DGSEY G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEYSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSF 240
Y + + T+ ++HR R+Q L ++G D+LA E +P EAQ LL E AW +F
Sbjct: 152 YGDAIKLETLKDFHRRRVQILADSGVDLLAFEAVPNKPEAQAYADLLEEENIITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPL 296
+ KD ++ +G+S + +A +C D+++AVG+NC P + LI K P+
Sbjct: 212 NSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLPKKVTAKPI 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE I +EW
Sbjct: 267 VIYPNSGETYDGIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 ---NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI K P+V+Y
Sbjct: 215 DGTNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLPKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|125537333|gb|EAY83821.1| hypothetical protein OsI_39039 [Oryza sativa Indica Group]
Length = 342
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 174/393 (44%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ V + H D+++AGA+I++T SYQA+I
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ +EA RD+ +
Sbjct: 89 QGF-ESKGFSKEQSEDLLAKSVEIAREA----------------RDMFLK---------- 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
EH +D P + IL+A S+G YGA L DGSEY GDY E
Sbjct: 122 -----------EH-------------SDRPIQHPILVAASIGSYGAYLADGSEYSGDYGE 157
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
+ + ++H+ R++ L EAG D++A ETIP EAQ LL E AW SF+ K
Sbjct: 158 AGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELLDECNISIPAWFSFNSK 217
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNS 302
D HI +G+S + A + ++ AVG+NC P + LI + K + P+++YPNS
Sbjct: 218 DGVHIVSGDSLIECATIANGCS--KVGAVGINCTPPRFIHGLILSIRKVTDKPMLIYPNS 275
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE RYDA
Sbjct: 276 GE--------------------------------------------------RYDAEKKE 285
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
W++ D YV +W +G L+GGCCRT
Sbjct: 286 WVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRT 318
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HI +G+S + A + ++ AVG+NC P + LI + K + P+++YPNS
Sbjct: 218 DGVHIVSGDSLIECATIANGCS--KVGAVGINCTPPRFIHGLILSIRKVTDKPMLIYPNS 275
Query: 569 GERYD 573
GERYD
Sbjct: 276 GERYD 280
>gi|452988121|gb|EME87876.1| hypothetical protein MYCFIDRAFT_128460 [Pseudocercospora fijiensis
CIRAD86]
Length = 328
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 152/304 (50%), Gaps = 58/304 (19%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DG +++L T D+ HPLWS+ L +V H D+ KAGA+I +T SYQ
Sbjct: 15 GVLIVDGALATELETRGHDL--NHPLWSAKLLKENPASVQDVHLDYFKAGANIAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A + G ++ + LIK SV+ K ARD A S P
Sbjct: 73 AGLEGLTTHFGIEEPEARLLIKRSVEAAK----------------AARD---AFSTSP-- 111
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
DGS + +L+AGSVGPYGA L DGSEY GDY
Sbjct: 112 ----DGS--------------------------GKTLLVAGSVGPYGAFLADGSEYTGDY 141
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
+ V E +HR RI L+EAG D+LA+ET+P E + L LL+ E+P AWL+ S
Sbjct: 142 KKTVDE--FKRFHRSRIAVLIEAGVDLLAVETMPNLSEIKALLELLQTEFPQAIAWLACS 199
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
KD H+ +G S+ Q N + L++ G+NCV+P + ++ ++ ++PL+ YP
Sbjct: 200 MKDAAHLCDGTSW-QSVLDLVNEHRSPLVSFGINCVQPHETADALDHIRRYTDLPLICYP 258
Query: 301 NSGE 304
NSGE
Sbjct: 259 NSGE 262
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 56/159 (35%), Gaps = 61/159 (38%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCKTE------------ 342
+ V +G +LA+ET+P E + L LL+ E+P AWL+ S K
Sbjct: 156 IAVLIEAGVDLLAVETMPNLSEIKALLELLQTEFPQAIAWLACSMKDAAHLCDGTSWQSV 215
Query: 343 -----------------------------------NIPLVVYPNSGERYDAVNARWIDRD 367
++PL+ YPNSGE +++ W
Sbjct: 216 LDLVNEHRSPLVSFGINCVQPHETADALDHIRRYTDLPLICYPNSGEIWESATHTWHGSQ 275
Query: 368 LCEPVDKYVTD-------------WLDEGVALVGGCCRT 393
+D + + W G LVGGCCRT
Sbjct: 276 QRTLLDDHSSKSEAASQLAAEFDTWTKAGARLVGGCCRT 314
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+ +G S+ Q N + L++ G+NCV+P + ++ ++ ++PL+ YPNS
Sbjct: 202 DAAHLCDGTSW-QSVLDLVNEHRSPLVSFGINCVQPHETADALDHIRRYTDLPLICYPNS 260
Query: 569 GERYD 573
GE ++
Sbjct: 261 GEIWE 265
>gi|372276990|ref|ZP_09513026.1| homocysteine methyltransferase [Pantoea sp. SL1_M5]
gi|390437447|ref|ZP_10225985.1| homocysteine methyltransferase [Pantoea agglomerans IG1]
Length = 311
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 173/393 (44%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ + A
Sbjct: 75 QGFAT-RGLDEAESLALIAQSVELARRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RHDY--------------LAVRPDAKTLLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPR+QAL+ AGAD+LA ET+P+ EAQ L +LL E+P +AW SF+ +D
Sbjct: 140 LPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLLAEFPEGRAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
HIS+G + V + N P Q++AVG+NCV V+ ++QL K + PLVVYPNSGE
Sbjct: 200 GHISDGTPLSDVV-SWLNQQP-QVVAVGINCVALESVTPALQQLQKLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + +W G L+GGCCRT D
Sbjct: 268 SAPSGCTLHDKLAEWQQAGAKLIGGCCRTSPND 300
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G + V + N P Q++AVG+NCV V+P ++QL K + PLVVYPNS
Sbjct: 198 DAGHISDGTPLSDVV-SWLNQQP-QVVAVGINCVALESVTPALQQLQKLTDKPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|429101648|ref|ZP_19163622.1| Homocysteine S-methyltransferase [Cronobacter turicensis 564]
gi|426288297|emb|CCJ89735.1| Homocysteine S-methyltransferase [Cronobacter turicensis 564]
Length = 310
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 160/338 (47%), Gaps = 64/338 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S+ LI SV+ +A +A A + A GP
Sbjct: 76 AGFAA-RGLDEAQSWALIARSVE-----LARQAREAFYKEQPDA---------GP----- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+AGSVGPYGA L DGSEYRGDY
Sbjct: 116 ---------------------------------LLVAGSVGPYGAYLADGSEYRGDYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+ AG D+LA ET+P+ EA+ L L +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLAAGVDLLACETLPSLSEARALAAQLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + L +PLVVYPNSG
Sbjct: 201 GHISDGTPLADVAAA---LAPYPQIVALGINCVALEKTTAALAHLHDATRLPLVVYPNSG 257
Query: 304 EHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
E A+ + Q L L EW A L C
Sbjct: 258 EQYDAVSKTWHHSGHACQTLAHYLDEWRAAGAALIGGC 295
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 47/143 (32%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK--------------------- 340
+G +LA ET+P+ EA+ L L +P +AW +F+ +
Sbjct: 160 AGVDLLACETLPSLSEARALAAQLESYPQARAWFTFTLRDSGHISDGTPLADVAAALAPY 219
Query: 341 -------------------------TENIPLVVYPNSGERYDAVNARWIDRD-LCEPVDK 374
+PLVVYPNSGE+YDAV+ W C+ +
Sbjct: 220 PQIVALGINCVALEKTTAALAHLHDATRLPLVVYPNSGEQYDAVSKTWHHSGHACQTLAH 279
Query: 375 YVTDWLDEGVALVGGCCRTYAED 397
Y+ +W G AL+GGCCRT D
Sbjct: 280 YLDEWRAAGAALIGGCCRTTPAD 302
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + L +PLVVYPN
Sbjct: 199 DSGHISDGTPLADVAAA---LAPYPQIVALGINCVALEKTTAALAHLHDATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|115489490|ref|NP_001067232.1| Os12g0607000 [Oryza sativa Japonica Group]
gi|108862937|gb|ABA99257.2| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
gi|113649739|dbj|BAF30251.1| Os12g0607000 [Oryza sativa Japonica Group]
gi|125580011|gb|EAZ21157.1| hypothetical protein OsJ_36805 [Oryza sativa Japonica Group]
gi|385717680|gb|AFI71275.1| homocysteine S-methyltransferase 3 [Oryza sativa Japonica Group]
Length = 342
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 174/393 (44%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ V + H D+++AGA+I++T SYQA+I
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ +EA RD+ +
Sbjct: 89 QGF-ESKGFSKEQSEDLLAKSVEIAREA----------------RDMFLK---------- 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
EH +D P + IL+A S+G YGA L DGSEY GDY E
Sbjct: 122 -----------EH-------------SDRPIQHPILVAASIGSYGAYLADGSEYSGDYGE 157
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
+ + ++H+ R++ L EAG D++A ETIP EAQ LL E AW SF+ K
Sbjct: 158 AGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELLDECNISIPAWFSFNSK 217
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNS 302
D HI +G+S + A + ++ AVG+NC P + LI + K + P+++YPNS
Sbjct: 218 DGVHIVSGDSLIECATIANGCS--KVGAVGINCTPPRFIHGLILSIRKVTDKPILIYPNS 275
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE RYDA
Sbjct: 276 GE--------------------------------------------------RYDAEKKE 285
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
W++ D YV +W +G L+GGCCRT
Sbjct: 286 WVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRT 318
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HI +G+S + A + ++ AVG+NC P + LI + K + P+++YPNS
Sbjct: 218 DGVHIVSGDSLIECATIANGCS--KVGAVGINCTPPRFIHGLILSIRKVTDKPILIYPNS 275
Query: 569 GERYD 573
GERYD
Sbjct: 276 GERYD 280
>gi|422858544|ref|ZP_16905194.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1057]
gi|327460430|gb|EGF06767.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1057]
Length = 315
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 175/403 (43%), Gaps = 119/403 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESRGYDV--SGKLWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + +Y L+K +V ++A
Sbjct: 71 SIPAFVE-AGLTPEKAYDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY GD
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPYPLVAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE E+HRPRIQAL+EAG D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G + Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSETAISDGTKIEDLGNLA--QESPQVLAVGFNCTAPHLITPLLDGLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W D R L E W ++GV L GGCCRT ED
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQNQGVRLFGGCCRTRPED 305
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLITPLLDGLGQVCNKPFLTYPNSGETYN 264
>gi|422851690|ref|ZP_16898360.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK150]
gi|325694578|gb|EGD36487.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK150]
Length = 315
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 179/408 (43%), Gaps = 109/408 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESRGYDV--SGKLWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + +Y L+K +V ++AI
Sbjct: 71 SIPAFIE-AGLAPEKAYDLLKETVFLAQKAI----------------------------- 100
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
E+V W L ++ + LIAGSVGPY A L DGSEY GD
Sbjct: 101 -------------ENV-------WQELSPEEQKQRPYPLIAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE E+HRPRIQAL+E G D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEGEFQEFHRPRIQALLEVGCDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESSQVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE L + + P Q+ L + K ++ N G R
Sbjct: 257 PNSGETY------------NGLTKTWHDDPEQERSLLENSK-------LWQNQGVR---- 293
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
L GGCCRT ED + L D
Sbjct: 294 --------------------------LFGGCCRTRPEDIAQLAKGLKD 315
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 511 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSG 569
+ IS+G ++ Q++AVG NC P +++PL++ L + N P + YPNSG
Sbjct: 203 ENAISDGTKIEELGNLA--QESSQVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTYPNSG 260
Query: 570 ERYD 573
E Y+
Sbjct: 261 ETYN 264
>gi|422876517|ref|ZP_16922987.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1056]
gi|332361325|gb|EGJ39129.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1056]
Length = 315
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 179/410 (43%), Gaps = 125/410 (30%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + +G + G LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELES-LGYNVSGK-LWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEA-----IALEATHARIRSDDPARDILIAGSV 118
SI F+E L + +Y L+K +V ++A I L + R L+AGSV
Sbjct: 71 SIPAFIE-AGLTPEKAYNLLKETVFLAQKAIENIWIGLSPEEQKQRPYP-----LVAGSV 124
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
GPY A L DGSEY GDY +SE EY
Sbjct: 125 GPYAAYLADGSEYTGDY--QLSE----------------------------------EEY 148
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAW 237
R ++HRPRIQAL+EAG+D+LAIETIP E + RLL E+P +A+
Sbjct: 149 R-------------DFHRPRIQALLEAGSDLLAIETIPNGAETAAILRLLVEEFPQAEAY 195
Query: 238 LSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
LSF + + IS+G ++ Q++AVG NC P +++SL+ +L + N PL
Sbjct: 196 LSFVAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIASLLGRLGQVCNKPL 253
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
+ YPNSGE Y
Sbjct: 254 LTYPNSGE--------------------------------------------------TY 263
Query: 357 DAVNARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ + W D R L E W ++GV L GGCCRT ED +
Sbjct: 264 NGLTKTWHDDPEQERSLLENSKL----WQEQGVRLFGGCCRTRPEDIAQL 309
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++ L+ +L + N PL+ YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIASLLGRLGQVCNKPLLTYPNSGETYN 264
>gi|422846590|ref|ZP_16893273.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK72]
gi|325687398|gb|EGD29419.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK72]
Length = 315
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 174/408 (42%), Gaps = 119/408 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DG ++L + +G + G LWS+ +L + H +++AG+DI+ T+SYQ
Sbjct: 12 EIIILDGALGTELES-LGYDVSGK-LWSAQYLLDQPQIIQDVHESYVRAGSDIITTSSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI F+E L + Y +K + K+AI
Sbjct: 70 ASISAFIE-AGLTPEKGYDFLKETAFLAKKAI---------------------------- 100
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRG 180
E+V W L ++ + L+AGSVGPY A L DGSEY G
Sbjct: 101 --------------ENV-------WQALSPEEQKQRPYPLVAGSVGPYAAYLADGSEYTG 139
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
DY +SE E+HRPRIQAL+EAG D+LAIETIP EA + RLL E+P +A+LS
Sbjct: 140 DY--QLSEEEFQEFHRPRIQALLEAGCDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLS 197
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVV 298
F + + IS+G + Q++AVG NC P ++S L++ L + N +
Sbjct: 198 FVAQSETAISDGTKIEDLGNLA--QKSPQVLAVGFNCTAPHLISPLLDGLGQVCNKTFLT 255
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE Y+
Sbjct: 256 YPNSGE--------------------------------------------------TYNG 265
Query: 359 VNARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ W D R L E W ++GV L GGCCRT ED +
Sbjct: 266 LTKTWHDDPEQERSLLENSKL----WQEQGVQLFGGCCRTRPEDIAQL 309
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P ++SPL++ L + N + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLISPLLDGLGQVCNKTFLTYPNSGETYN 264
>gi|323351642|ref|ZP_08087296.1| homocysteine S-methyltransferase [Streptococcus sanguinis VMC66]
gi|322122128|gb|EFX93854.1| homocysteine S-methyltransferase [Streptococcus sanguinis VMC66]
Length = 315
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 178/407 (43%), Gaps = 119/407 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESLSYDV--SGKLWSAQYLLDQPRIIQDVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++A
Sbjct: 71 SIPAFIE-AGLTPEKGYDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY G+
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPCPLVAGSVGPYAAYLADGSEYTGN 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGVEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++SL+ +L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIASLLGELGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W D R L E W ++GV L GGCCRT ED +
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQNQGVRLFGGCCRTRPEDIAQL 309
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++ L+ +L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIASLLGELGQVCNKPFLTYPNSGETYN 264
>gi|381403600|ref|ZP_09928284.1| homocysteine methyltransferase [Pantoea sp. Sc1]
gi|380736799|gb|EIB97862.1| homocysteine methyltransferase [Pantoea sp. Sc1]
Length = 311
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 174/393 (44%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCQLADA--LWSAKVLMEDPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L D S LI SV+ + A
Sbjct: 75 QGFAT-RGLSEDESLALIARSVELTQRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RHDY--------------LAVRPDAKTLLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPR+QAL+ AGAD+LA ET+P+ EAQ L +LL E+P +AW SF+ +D
Sbjct: 140 LPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLLAEFPDARAWFSFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
HIS+G +V + N P Q++A+GVNCV V+ ++QL+T + PLVVYPNSGE
Sbjct: 200 GHISDGTPLAEVV-SWLNQQP-QVVALGVNCVALESVTPALQQLQTLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDAGSKTWH 267
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + +W G L+GGCCRT D
Sbjct: 268 SAPSGCTLHDKLAEWQQAGARLIGGCCRTSPGD 300
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D HIS+G +V + N P Q++A+GVNCV V+P ++QL+T + PLVVYPNS
Sbjct: 198 DAGHISDGTPLAEVV-SWLNQQP-QVVALGVNCVALESVTPALQQLQTLTDKPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|78047005|ref|YP_363180.1| homocysteine methyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035435|emb|CAJ23080.1| Homocysteine S-methyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 321
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 168/395 (42%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A A+ R+D ++ PY A L
Sbjct: 83 LGFAAR-GLDAAQAQALIARSV----------ALAAQARADHL--------TLHPYAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ + + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQARAALHSLAALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ WL G L+GGCCRT D
Sbjct: 276 HAGHGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQARAALHSLAALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|283834324|ref|ZP_06354065.1| homocysteine S-methyltransferase [Citrobacter youngae ATCC 29220]
gi|291069856|gb|EFE07965.1| homocysteine S-methyltransferase [Citrobacter youngae ATCC 29220]
Length = 310
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 168/394 (42%), Gaps = 111/394 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 LLDGAMATELEARGCNLADS--LWSAKVLVENPQLIREVHLDYYRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + LD S LI SV+ ++A
Sbjct: 76 AG-LAARGLDEAQSKALIGKSVELARKA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 --------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDYQRS 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V + +HRPR++AL++AGAD+LA ET+P E L LL +P +AW SF+ +D
Sbjct: 143 VG--ALQAFHRPRVEALLDAGADLLACETLPNFTEIGALAELLTAYPRARAWFSFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
+H+S+G V Q++A+G+NC+ ++ ++ L +PLVVYPNSGE
Sbjct: 201 EHLSDGTPLRDVVALLAGY--PQVVALGINCIALEKTTAALQHLHGLTALPLVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 259 --------------------------------------------------QYDAASKTWH 268
Query: 365 DR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ C + Y+ W G L+GGCCRT +D
Sbjct: 269 HHGEHCAHLADYLPQWRAAGARLIGGCCRTTPKD 302
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L +PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALEKTTAALQHLHGLTALPLVVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>gi|172058994|ref|YP_001815454.1| homocysteine methyltransferase [Exiguobacterium sibiricum 255-15]
gi|171991515|gb|ACB62437.1| homocysteine S-methyltransferase [Exiguobacterium sibiricum 255-15]
Length = 310
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 167/397 (42%), Gaps = 121/397 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG +++L + ++ D PLWS+ L + + + H ++ K GAD +T
Sbjct: 19 LLDGALATELERHGRNLDD--PLWSARVLLEEPEQIHRVHANYFKIGADCAIT------- 69
Query: 66 GGFMEFLDLDYDSSYQ--LIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SSYQ + S +KE A+E +
Sbjct: 70 ------------SSYQASVAGFSSRGIKEEEAIELMKQTVY------------------- 98
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
+A+ R T A LIAGS+GPYGA L DGSEY G Y
Sbjct: 99 --------------------LAQQARAETGPAADHALIAGSIGPYGAYLSDGSEYIGHY- 137
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V +A + +HRPR++AL+ AGAD+LA ETIP+ +EA+ML RLL E+P Q AWL+FS +
Sbjct: 138 -GVDDAQLEAFHRPRLEALIAAGADVLAFETIPSLQEAKMLFRLLEEFPEQSAWLAFSLR 196
Query: 244 DDKHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
D HIS G ++ C D QL A+G NC + + I LK ++P++VYP
Sbjct: 197 DATHISEGTPLSE----CIEALGDHPQLAAIGANCFPASIATEFITTLKQLTDVPIIVYP 252
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE +YD V+
Sbjct: 253 NSGE--------------------------------------------------QYDPVS 262
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + + +W G L+GGCCRT E
Sbjct: 263 KTWSGETVRTAFEDIAPEWYAAGARLIGGCCRTTPEQ 299
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYP 566
D HIS G ++ C D QL A+G NC + + I LK ++P++VYP
Sbjct: 197 DATHISEGTPLSE----CIEALGDHPQLAAIGANCFPASIATEFITTLKQLTDVPIIVYP 252
Query: 567 NSGERYD 573
NSGE+YD
Sbjct: 253 NSGEQYD 259
>gi|326501794|dbj|BAK06389.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 179/394 (45%), Gaps = 92/394 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + D+ D LWS+ L +A + + H D+++AGA+I+ T SYQA++
Sbjct: 23 VVDGALGTELEAHGADLQD--ELWSARCLVSAPHLIRKVHLDYLEAGANIITTASYQATL 80
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG-SVGPYGAS 124
GF + + + L++ SV +EA R I + G S GPY A
Sbjct: 81 QGF-QSRGVSREQGEALLRRSVQIAQEA----------------RAIFVEGRSKGPYAA- 122
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
RD + + R +L+A SVG YGA L DGSEY GDY
Sbjct: 123 -RDEKD-------------------AVASGARRPVLVAASVGSYGAYLADGSEYTGDYGR 162
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
V++ + +HR R+Q L +AG D++A ETIP EAQ LL E + AW SF+ K
Sbjct: 163 SVTKEALKNFHRRRLQVLADAGPDLIAFETIPNKLEAQAYAELLEENDIRIPAWFSFTSK 222
Query: 244 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
D ++G+ T+ VA +C ++ AVG+NC P +++ LI + K + P+VVY
Sbjct: 223 DGASAASGDPITECAAVADSCR-----RVAAVGINCTVPRLINGLILSISKVTSKPIVVY 277
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PN+GE +A ET +EW + + V
Sbjct: 278 PNTGETYVA-ET--------------KEWVDSAGAGAGGGGAPGTDFV------------ 310
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
V W G +LVGGCCRT
Sbjct: 311 --------------SCVGKWRQAGASLVGGCCRT 330
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 493 RTYAEDTLHMKHRLDDW------DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCV 543
+ YAE R+ W D ++G+ T+ VA +C ++ AVG+NC
Sbjct: 200 QAYAELLEENDIRIPAWFSFTSKDGASAASGDPITECAAVADSCR-----RVAAVGINCT 254
Query: 544 RPLMVSPLIEQL-KTENIPLVVYPNSGERY 572
P +++ LI + K + P+VVYPN+GE Y
Sbjct: 255 VPRLINGLILSISKVTSKPIVVYPNTGETY 284
>gi|294665003|ref|ZP_06730312.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605222|gb|EFF48564.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 321
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 172/395 (43%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAVQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P+ E L +LL+ ++P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSVSEIVALRQLLQHDFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVGVNC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGVNCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R + WL G L+GGCCRT D
Sbjct: 276 HAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVGVNC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGVNCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|304398684|ref|ZP_07380556.1| homocysteine S-methyltransferase [Pantoea sp. aB]
gi|440758196|ref|ZP_20937368.1| Homocysteine S-methyltransferase [Pantoea agglomerans 299R]
gi|304353895|gb|EFM18270.1| homocysteine S-methyltransferase [Pantoea sp. aB]
gi|436428075|gb|ELP25740.1| Homocysteine S-methyltransferase [Pantoea agglomerans 299R]
Length = 311
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 174/393 (44%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ + A
Sbjct: 75 QGFAT-RGLDEAQSLALIAQSVELARRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RQDY--------------LAVRPDAKTLLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPR+QAL+ AGAD+LA ET+P+ EAQ L +LL E+P +AW +F+ +D
Sbjct: 140 LPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLLAEFPEGRAWFTFTLRDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
HIS+G ++V + N P Q+IA+G+NCV V+ ++QL + + PLVVYPNSGE
Sbjct: 200 GHISDGTPLSEVV-SWLNQQP-QVIALGINCVALESVTPALQQLQRLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDASSKTWH 267
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + +W G L+GGCCRT D
Sbjct: 268 SAPSGCTLHDKLDEWQQAGAKLIGGCCRTSPND 300
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G ++V + N P Q+IA+G+NCV V+P ++QL + + PLVVYPNS
Sbjct: 198 DAGHISDGTPLSEVV-SWLNQQP-QVIALGINCVALESVTPALQQLQRLTDKPLVVYPNS 255
Query: 569 GERYD 573
GE+YD
Sbjct: 256 GEQYD 260
>gi|429109162|ref|ZP_19170932.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 507]
gi|426310319|emb|CCJ97045.1| Homocysteine S-methyltransferase [Cronobacter malonaticus 507]
Length = 311
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 161/338 (47%), Gaps = 64/338 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + H D+ +AGA +T SYQA+
Sbjct: 18 VLDGALATELEARGCNLADS--LWSAKVLMEQPELIYAVHLDYFRAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ ++A
Sbjct: 76 AGFAA-RGLDEAQSRALIARSVELARQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +H P +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RDDY-----------YHEQPDAGP---LLVAGSVGPYGAYLADGSEYRGDYT-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A A++HRPR++AL+EAGAD+LA ET+P+ EA L LL +P +AW +F+ +D
Sbjct: 141 LSAAEFADFHRPRVEALLEAGADLLACETLPSLPEALALAALLESYPQARAWFTFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
HIS+G VA + P Q++A+G+NCV ++ + +L +PLVVYPNSG
Sbjct: 201 DHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALGRLHDATRLPLVVYPNSG 257
Query: 304 EHILAIETI--PASKEAQMLCRLLREWPNQKAWLSFSC 339
E A+ Q L L EW A L C
Sbjct: 258 EQYDAVSKTWRHDGHACQTLAHYLNEWRAAGAALIGGC 295
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 60/140 (42%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
+G +LA ET+P+ EA L LL +P +AW +F+ +
Sbjct: 159 EAGADLLACETLPSLPEALALAALLESYPQARAWFTFTLRDSDHISDGTPLGDVAAALAP 218
Query: 341 --------------------------TENIPLVVYPNSGERYDAVNARWI-DRDLCEPVD 373
+PLVVYPNSGE+YDAV+ W D C+ +
Sbjct: 219 YPQIVALGINCVALEKTTAALGRLHDATRLPLVVYPNSGEQYDAVSKTWRHDGHACQTLA 278
Query: 374 KYVTDWLDEGVALVGGCCRT 393
Y+ +W G AL+GGCCRT
Sbjct: 279 HYLNEWRAAGAALIGGCCRT 298
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPN 567
D HIS+G VA + P Q++A+G+NCV + + +L +PLVVYPN
Sbjct: 199 DSDHISDGTPLGDVAAA---LAPYPQIVALGINCVALEKTTAALGRLHDATRLPLVVYPN 255
Query: 568 SGERYD 573
SGE+YD
Sbjct: 256 SGEQYD 261
>gi|326505178|dbj|BAK02976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 179/410 (43%), Gaps = 113/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + D+ D PLWS+ + ++ + + H D+I+AGA+I++T SYQA+I
Sbjct: 36 VLDGGLATELEAHGADLND--PLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATI 93
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + L+ SV+ EA R++ +
Sbjct: 94 QGF-EAKGFSKEQGENLLTKSVEIAHEA----------------REMFLK---------- 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH ++T R IL+A S+G YGA L DGSEY GDY E
Sbjct: 127 -----------EHPDQSTAL-----------RPILVAASIGSYGAYLADGSEYSGDYGEA 164
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
+ + ++HR R+Q L EA D++A ETIP EAQ LL E + +W SF+ KD
Sbjct: 165 GTLEFLKDFHRRRLQVLAEARPDLIAFETIPNKLEAQAYVELLDECNINIPSWFSFNSKD 224
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C + AVG+NC P + SLI + K + P+++YP
Sbjct: 225 GVNVVSGDSLIECANIANACAKVG-----AVGINCTPPRFIHSLILSIRKVTDKPILIYP 279
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYDA
Sbjct: 280 NSGE--------------------------------------------------RYDAEK 289
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
W++ D YV +W +G AL+GGCCRT + L+ +
Sbjct: 290 KEWVESTGVSDGDFVSYVGEWCKDGAALIGGCCRTTPNTIRAISRSLNQY 339
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D ++ +G+S + +A C + AVG+NC P + LI + K + P+++Y
Sbjct: 224 DGVNVVSGDSLIECANIANACAKVG-----AVGINCTPPRFIHSLILSIRKVTDKPILIY 278
Query: 566 PNSGERYD 573
PNSGERYD
Sbjct: 279 PNSGERYD 286
>gi|22748320|gb|AAN05322.1| Putative homocysteine S-methyltransferase-1 [Oryza sativa Japonica
Group]
gi|108706902|gb|ABF94697.1| Homocysteine S-methyltransferase 1, putative, expressed [Oryza
sativa Japonica Group]
gi|125585432|gb|EAZ26096.1| hypothetical protein OsJ_09954 [Oryza sativa Japonica Group]
gi|218192354|gb|EEC74781.1| hypothetical protein OsI_10560 [Oryza sativa Indica Group]
Length = 329
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 173/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T + + H +++AGAD+++++SYQA+I
Sbjct: 17 VIDGGFATQLEALGADIND--PLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ AR +L+ + G S+
Sbjct: 75 PGFL---------------------------------------ARGMLLEEAEGLLRRSI 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E R ++ + + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 96 ELALEARDEFWKSTLRKSKPVYNR---------ALVAASIGSYGAYLADGSEYSGSYGED 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 147 ITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEENIQVPSWICFSSVD 206
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
K++ +GESF + + + D++ VGVNC P + +I +LK + + VYPNSG
Sbjct: 207 GKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRELKKQTKKAIAVYPNSG 264
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C + +DA+ R
Sbjct: 265 EI----------------------WDGRAKRWLPAQCFGH-----------KSFDALAKR 291
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W + G +LVGGCCRT
Sbjct: 292 ----------------WQEAGASLVGGCCRT 306
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K++ +GESF + + + D++ VGVNC P + +I +LK + + VYPNS
Sbjct: 206 DGKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRELKKQTKKAIAVYPNS 263
Query: 569 GERYD 573
GE +D
Sbjct: 264 GEIWD 268
>gi|115482070|ref|NP_001064628.1| Os10g0422200 [Oryza sativa Japonica Group]
gi|31432147|gb|AAP53817.1| Homocysteine S-methyltransferase 2, putative, expressed [Oryza
sativa Japonica Group]
gi|113639237|dbj|BAF26542.1| Os10g0422200 [Oryza sativa Japonica Group]
gi|125531969|gb|EAY78534.1| hypothetical protein OsI_33628 [Oryza sativa Indica Group]
gi|125574831|gb|EAZ16115.1| hypothetical protein OsJ_31561 [Oryza sativa Japonica Group]
gi|215686685|dbj|BAG88938.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215716981|dbj|BAG95344.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737310|dbj|BAG96239.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 335
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 171/394 (43%), Gaps = 103/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L D+ D LWS+ L T D + + H D+++AGA +++T SYQA+I
Sbjct: 24 VIDGGLATELEANGADLKDA--LWSARCLFTCPDLIRKVHLDYLEAGASVLITGSYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ + S ++ SV+ EA A+ SD+ A+D+
Sbjct: 82 QGFLS-KGFSQEESESFLRRSVELACEARAIYLEKCSNGSDE-AKDV------------- 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++YR R ILIA SVG YGA L DGSEY GDY
Sbjct: 127 ---TKYR-----------------------KRPILIAASVGSYGAYLADGSEYSGDYGNE 160
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
+ + +H R+Q L EAG D++ ETIP E Q LL E + AW F+ KD
Sbjct: 161 GTLEFLKNFHLRRLQVLAEAGPDVIVFETIPNKIETQAYVELLEECKLRIPAWFGFTSKD 220
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
++ +G+S + A + ++ AVG+NC P + L+ ++
Sbjct: 221 GVNVVSGDSLIECASIADSCK--EVAAVGINCTPPRFIHELVLSIR-------------- 264
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
K + P+++YPNSGE YD + W+
Sbjct: 265 -----------------------------------KVTSKPILIYPNSGESYDPIRKEWV 289
Query: 365 DRDLCEPVDK-----YVTDWLDEGVALVGGCCRT 393
+ C + YV W + G +L+GGCCRT
Sbjct: 290 E---CSGISNEDFVSYVKKWHEAGASLIGGCCRT 320
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 493 RTYAEDTLHMKHRLDDW------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 546
+ Y E K R+ W D ++ +G+S + A + ++ AVG+NC P
Sbjct: 197 QAYVELLEECKLRIPAWFGFTSKDGVNVVSGDSLIECASIADSCK--EVAAVGINCTPPR 254
Query: 547 MVSPLIEQL-KTENIPLVVYPNSGERYD 573
+ L+ + K + P+++YPNSGE YD
Sbjct: 255 FIHELVLSIRKVTSKPILIYPNSGESYD 282
>gi|224107975|ref|XP_002314674.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222863714|gb|EEF00845.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 338
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 189/394 (47%), Gaps = 103/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + D+ D PLWS+ L ++ V + H D++ AGA+I+++ SYQA+I
Sbjct: 26 VVDGGLATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANIILSASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + L++ SV+ IA EA R+I
Sbjct: 84 QGFVA-KGLSVEEAESLLRRSVE-----IACEA-----------REI------------- 113
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
+ ++T W + + + +R +L+A S+G YGA L DGSEY G Y +
Sbjct: 114 ------------YYDKSTKGSWDYIESGNISRRPVLVAASIGSYGAYLADGSEYSGKYGD 161
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCK 243
VS T+ ++HR R+Q L+++GAD++A ETIP EA+ LL E + AW SF+ K
Sbjct: 162 AVSLETLKDFHRRRLQVLLKSGADLIACETIPNRLEAKAYAELLEEEGINIPAWFSFNSK 221
Query: 244 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
D ++ +G+S + +A +C Q++AVG+NC P + L+ + K + P+V+Y
Sbjct: 222 DGINVVSGDSILECASIADSC-----KQVVAVGINCTPPRFIHGLVLSIRKATSKPIVIY 276
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE A L++W K+ +
Sbjct: 277 PNSGETYNA---------------ELKQWT----------KSSGV--------------- 296
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+D D Y+ W + G +L GGCCRT
Sbjct: 297 ----VDEDFV----SYINKWREAGASLFGGCCRT 322
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D ++ +G+S + +A +C Q++AVG+NC P + L+ + K + P
Sbjct: 218 FNSKDGINVVSGDSILECASIADSC-----KQVVAVGINCTPPRFIHGLVLSIRKATSKP 272
Query: 562 LVVYPNSGERYDFHL 576
+V+YPNSGE Y+ L
Sbjct: 273 IVIYPNSGETYNAEL 287
>gi|422821310|ref|ZP_16869503.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK353]
gi|422870987|ref|ZP_16917480.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1087]
gi|324991224|gb|EGC23158.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK353]
gi|328946141|gb|EGG40286.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1087]
Length = 315
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 180/409 (44%), Gaps = 115/409 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + +G + G LWS+ +L + H +++A +DI+ T+SYQA
Sbjct: 13 IIILDGALGTELES-LGYDVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + +Y L+K +V ++AI E T + ++ + PY
Sbjct: 71 SIPVFIE-AGLTPEKAYDLLKETVFLAQKAI--ENTWQALSPEEQKQR--------PYP- 118
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
L+AGSVGPY A L DGSEY GDY
Sbjct: 119 ------------------------------------LVAGSVGPYAAYLADGSEYTGDY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+SE ++HRPRIQAL+EAG+D+LAIETIP EA + RLL E+P +A+LSF
Sbjct: 142 -QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAILRLLAEEFPQAEAYLSFVA 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPN 301
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + YPN
Sbjct: 201 QSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLITPLLDGLGQVCNKPFLTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE Y+ +
Sbjct: 259 SGE--------------------------------------------------TYNGLTK 268
Query: 362 RWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D R L E W ++GV L GGCCRT ED + L
Sbjct: 269 TWHDDPEQERSLLENSKL----WQNQGVRLFGGCCRTRPEDITQLARGL 313
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLITPLLDGLGQVCNKPFLTYPNSGETYN 264
>gi|260222063|emb|CBA31253.1| Homocysteine S-methyltransferase ybgG [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 317
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 167/404 (41%), Gaps = 112/404 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG +++L + DG LWS+ L + + H D+ AGAD+ T SYQA
Sbjct: 18 LMVLDGALATELERRGAYLNDG--LWSAKLLIEQPELIRAVHADYFAAGADVATTASYQA 75
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ F + + L++ SV EA RD A G
Sbjct: 76 TFEAFTR-RGMSRTEAADLMRLSVTLACEA----------------RDAFWAEPANRVG- 117
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
LR L+A SVGPYGA L DGSEYRG+Y
Sbjct: 118 RLRP--------------------------------LVAASVGPYGAMLADGSEYRGNY- 144
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+S A +A++HR R+Q L +GAD+LA ETIP EA + +L E + AW+SFSCK
Sbjct: 145 -GLSRAALADFHRERMQVLSTSGADLLACETIPGLDEALAIADVLAEQNNITAWISFSCK 203
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNS 302
D +H GE P ++A+GVNC P V+SL+EQ K P++VYPNS
Sbjct: 204 DGEHNVQGERLADCV-AALEAYP-HIVAIGVNCTAPEHVASLVEQAKARTTKPVLVYPNS 261
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GEH YDA
Sbjct: 262 GEH--------------------------------------------------YDAEGKV 271
Query: 363 WIDRDLCEPVDKY---VTDWLDEGVALVGGCCRTYAEDTLHMKH 403
W C+P D Y W +G ++GGCCRT +D ++H
Sbjct: 272 WT--GACDPADAYAEMAARWQAKGARMIGGCCRTGPDDIRAVRH 313
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVAR-----TCYNMNPDQL 535
LDE +A+ D L ++ + W +GE Q R P +
Sbjct: 178 LDEALAIA---------DVLAEQNNITAWISFSCKDGEHNVQGERLADCVAALEAYP-HI 227
Query: 536 IAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNSGERYD 573
+A+GVNC P V+ L+EQ K P++VYPNSGE YD
Sbjct: 228 VAIGVNCTAPEHVASLVEQAKARTTKPVLVYPNSGEHYD 266
>gi|242058861|ref|XP_002458576.1| hypothetical protein SORBIDRAFT_03g036040 [Sorghum bicolor]
gi|241930551|gb|EES03696.1| hypothetical protein SORBIDRAFT_03g036040 [Sorghum bicolor]
Length = 353
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 178/395 (45%), Gaps = 105/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++L + D+ D LWS+ LA+A + + H D+++AGAD++++ SYQA+I
Sbjct: 28 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + D S +L++ SV +EA R + +A
Sbjct: 86 EGF-QSRGFSRDESEELLRRSVHVAQEA----------------RRVFVA---------- 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
GD +++ + R P +L+A S+G YGA DGSEY GDY +
Sbjct: 119 ------EGDV-----DSSRSRRERERERPP---VLVAASIGSYGAYRADGSEYSGDYGKS 164
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
V++ + ++HR R+Q L AG D++A ETIP EAQ LL E AW SF+ KD
Sbjct: 165 VTKEALKDFHRRRLQVLAGAGPDLIAFETIPNKLEAQAYAELLEENGIRIPAWFSFTSKD 224
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H ++G+ T+ VA +C ++ AVGVNC P ++ LI + K + P+VVYP
Sbjct: 225 GVHAASGDPITECAAVADSC-----QRVAAVGVNCTSPRLIHGLILSIKKVTSKPIVVYP 279
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE Y A
Sbjct: 280 NSGE--------------------------------------------------TYIADT 289
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
W+D D D V +W G AL+GGCCRT
Sbjct: 290 NEWVDSDGATGTDFVSSVGEWRRAGAALIGGCCRT 324
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 493 RTYAEDTLHMKHRLDDW------DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCV 543
+ YAE R+ W D H ++G+ T+ VA +C ++ AVGVNC
Sbjct: 201 QAYAELLEENGIRIPAWFSFTSKDGVHAASGDPITECAAVADSC-----QRVAAVGVNCT 255
Query: 544 RPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
P ++ LI +K + P+VVYPNSGE Y
Sbjct: 256 SPRLIHGLILSIKKVTSKPIVVYPNSGETY 285
>gi|357605017|gb|EHJ64431.1| putative translin-associated factor X interacting protein 1 isoform
4 [Danaus plexippus]
Length = 695
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 114/217 (52%), Gaps = 56/217 (25%)
Query: 191 MAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISN 250
M +WHRPRI+AL++AG DILA+ET+P KEA+ML +++ + AW++FSCKDD+ + +
Sbjct: 1 MEKWHRPRIEALIDAGVDILALETMPCGKEAEMLASMIKNYAQIPAWITFSCKDDRSLVD 60
Query: 251 GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP---LVVYPNSGEHIL 307
GE F VA+ C+ +NP+QLI +GVNC P +V +L + + P LV YPNSGE
Sbjct: 61 GEDFQTVAQRCWEINPEQLIGIGVNCCSPKVVGNLFKDISKGIEPPLSLVTYPNSGEK-- 118
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRD 367
Y G W +RD
Sbjct: 119 -----------------------------------------YTEEG---------WGERD 128
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
C+ +D YV DWLD V VGGCCRTYAED ++ +
Sbjct: 129 -CDSLDTYVHDWLDLNVKFVGGCCRTYAEDIAQIRKK 164
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIP---LVVYP 566
DD+ + +GE F VA+ C+ +NP+QLI +GVNC P +V L + + P LV YP
Sbjct: 54 DDRSLVDGEDFQTVAQRCWEINPEQLIGIGVNCCSPKVVGNLFKDISKGIEPPLSLVTYP 113
Query: 567 NSGERY 572
NSGE+Y
Sbjct: 114 NSGEKY 119
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 464 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
W +RD C+ +D YV DWLD V VGGCCRTYAED ++ +
Sbjct: 124 WGERD-CDSLDTYVHDWLDLNVKFVGGCCRTYAEDIAQIRKK 164
>gi|239791618|dbj|BAH72253.1| ACYPI009247 [Acyrthosiphon pisum]
Length = 199
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 123/231 (53%), Gaps = 57/231 (24%)
Query: 6 LIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
L+DG F S + YV D + HPLW S + ++AVV+ HRD+I+AGA+ + TN+YQAS
Sbjct: 13 LLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRAGAEFLTTNTYQAS 72
Query: 65 IGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS 124
I GF ++L+L+YD S+QLIK SV + AI E++ R I I GSVGPYGAS
Sbjct: 73 IEGFQKYLNLNYDQSFQLIKKSVTICRRAIMEESS---------GRTIRIMGSVGPYGAS 123
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
L DGSEY G+Y+ + + +WH
Sbjct: 124 LCDGSEYNGNYIGKIDSKDLYDWH------------------------------------ 147
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235
+PRIQALVEAG D++ ETIP+ EA +L +L E+P +K
Sbjct: 148 -----------KPRIQALVEAGVDVVLFETIPSIIEANILLNILAEYPIKK 187
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 398 TLHMKHRLDD--WVSGLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKG 448
L+MK L D ++SG+ YV D + HPLW S + ++AVV+ HRD+I+
Sbjct: 6 VLNMKMYLLDGSFISGILPYVEYDSVMKHPLWGSNLIFNNEEAVVKAHRDYIRA 59
>gi|306831535|ref|ZP_07464693.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426320|gb|EFM29434.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 316
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 57/302 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + H ++++GADI+ T+SYQA++
Sbjct: 15 ILDGALGTELEKRGYDV--SGKLWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +F + K ++D I+L T AR ARDI G L
Sbjct: 73 QGLKDFGLSE--------KEALDI----ISLTVTLAR-----QARDIFWNG--------L 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D ++ + Y LI+G VGPY A L DGSEY G+Y
Sbjct: 108 SDEAKKKRPYP-----------------------LISGDVGPYAAYLADGSEYNGNY--Q 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+++ +HRPRIQAL+ AG+D L IETIP EA+ L LL E+P +A++SF+ +D
Sbjct: 143 LTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT--ENIPLVVYPNS 302
DKHIS+G +VA C +P Q++A G+NC P ++S L+++++T PLV YPNS
Sbjct: 203 DKHISDGTPIEEVAALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPNS 260
Query: 303 GE 304
GE
Sbjct: 261 GE 262
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT--ENIPLVVYPN 567
DDKHIS+G +VA C +P Q++A G+NC P ++S L+++++T PLV YPN
Sbjct: 202 DDKHISDGTPIEEVAALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPN 259
Query: 568 SGERYD 573
SGE YD
Sbjct: 260 SGEIYD 265
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 55/146 (37%), Gaps = 49/146 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFS--------------------- 338
++G L IETIP EA+ L LL E+P +A++SF+
Sbjct: 161 SAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVAALCE 220
Query: 339 -----------CKTENI---------------PLVVYPNSGERYDAVNARWID-RDLCEP 371
C + + PLV YPNSGE YD W D
Sbjct: 221 QSPQILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPNSGEIYDGATQTWKSIPDNSHT 280
Query: 372 VDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W G +VGGCCRT ED
Sbjct: 281 LLENSRAWHQLGAKIVGGCCRTSPED 306
>gi|453089962|gb|EMF18002.1| homocysteine methyltransferase [Mycosphaerella populorum SO2202]
Length = 343
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 177/390 (45%), Gaps = 82/390 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG +++L D+ HPLWS+ L ++ H D+ AGA I +T SYQA+
Sbjct: 18 IIDGALATELEARGHDL--NHPLWSAKLLQEDPTSIENVHYDYFAAGAYIAITASYQAAT 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + LD+ S
Sbjct: 76 AGLTKHLDI-------------------------------------------------SE 86
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG + VE +A + ++ + R +L+AGSVGPYGA L DGSEY G Y
Sbjct: 87 ADGKQLIQRSVEVAQQARTKAYSTVVGRN--RPLLVAGSVGPYGAYLSDGSEYTGQY--Q 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
++ ++HRPRI AL++AG D+LA+ETIP E Q L +LL E+P AWLS + +D
Sbjct: 143 LTMEQFMDFHRPRIAALIDAGVDLLALETIPNMNEIQALLKLLATEFPTATAWLSCTLQD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
+H+++G ++ +V +T + Q++A G+NCV + V++ + ++ +PL+ YPNSG
Sbjct: 203 TEHLADGTTWQEVLKTVQE-HETQILAFGINCVPAVSVTATLSKIHPLTTLPLIAYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E A+ K W + E+I + ++
Sbjct: 262 ETWDAV---------------------SKTW--HGTRAEDILHHHHTHAVHTEKEEEEEE 298
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D L + + + +W G L+GGCCRT
Sbjct: 299 RDAAL-KNLSTELEEWSVHGARLIGGCCRT 327
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+++G ++ +V +T + Q++A G+NCV + V+ + ++ +PL+ YPNS
Sbjct: 202 DTEHLADGTTWQEVLKTVQE-HETQILAFGINCVPAVSVTATLSKIHPLTTLPLIAYPNS 260
Query: 569 GERYD 573
GE +D
Sbjct: 261 GETWD 265
>gi|422848746|ref|ZP_16895422.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK115]
gi|325689767|gb|EGD31771.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK115]
Length = 315
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 176/407 (43%), Gaps = 119/407 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESLGYDV--SGKLWSAQYLLDQPQIIQDMHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++A
Sbjct: 71 SIPAFIE-AGLTSEKGYDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY G+
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPCPLVAGSVGPYAAYLADGSEYTGN 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP EA + RLL E+P + +LSF
Sbjct: 141 Y--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAAILRLLTEEFPQAETYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDALGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W D R L E W ++GV L GGCCRT ED +
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQNQGVRLFGGCCRTRPEDIAQL 309
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDALGQVCNKPFLTYPNSGETYN 264
>gi|357157405|ref|XP_003577787.1| PREDICTED: homocysteine S-methyltransferase 3-like [Brachypodium
distachyon]
Length = 340
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 175/395 (44%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + D+ D PLWS+ + + + + H D+I+AGA+I++T SYQA+I
Sbjct: 32 VLDGGLATELEAHGADLND--PLWSAKCILASPHLIRKVHLDYIEAGANIIITASYQATI 89
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L+ SV +EA R++ +
Sbjct: 90 QGF-ESKGFSKQQGEDLLTKSVKVAQEA----------------REMFLK---------- 122
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH ++T + IL+A S+G YGA L DGSEY GDY E
Sbjct: 123 -----------EHPDQSTPMQ----------HPILVAASIGSYGAYLADGSEYSGDYGEA 161
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
+ + ++HR R+Q L EAG D++A ETIP EAQ LL E +W SF+ KD
Sbjct: 162 GTLEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLDECNISIPSWFSFNSKD 221
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 222 GVNVVSGDSLIECATIANACAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 276
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYDA
Sbjct: 277 NSGE--------------------------------------------------RYDAEK 286
Query: 361 ARWIDR-DLCEP-VDKYVTDWLDEGVALVGGCCRT 393
W++ +C+ YV++W +G AL+GGCCRT
Sbjct: 287 KEWVESTGVCDGDFVSYVSEWCKDGAALIGGCCRT 321
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D ++ +G+S + +A C + AVG+NC P + LI + K + P+++Y
Sbjct: 221 DGVNVVSGDSLIECATIANACAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIY 275
Query: 566 PNSGERYD 573
PNSGERYD
Sbjct: 276 PNSGERYD 283
>gi|219847788|ref|YP_002462221.1| homocysteine methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219542047|gb|ACL23785.1| homocysteine S-methyltransferase [Chloroflexus aggregans DSM 9485]
Length = 316
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 164/389 (42%), Gaps = 107/389 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + H D+ AGAD+ +T SYQA+I
Sbjct: 15 VLDGALATELERRGCDLAD--PLWSAKVLIENPTLIQAVHADYFAAGADVAITASYQATI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM L + L++ SV + A +A A DPA + G + P
Sbjct: 73 PGFMA-RGLSEAEAIALLQRSVALARAA--RDAFWA-----DPANRV---GRIRP----- 116
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
L+A S+GPYGA L DGSEYRG+Y
Sbjct: 117 ----------------------------------LVAASIGPYGAYLHDGSEYRGEY--G 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A + ++HRPR+ AL A D+ A ETIP EA+ L LL E+P AW+SFS +D
Sbjct: 141 LSVADLIDFHRPRMAALAAAEPDLFACETIPCWDEARALVALLPEFPQLTAWISFSARDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
H S GE T+V +P Q+ A+G+NC P + LI +++ P+VVYPNSGE
Sbjct: 201 AHTSRGEPITEVVAE-IAAHP-QVAAIGINCTAPRFIPDLIRAIRSVTTKPIVVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V WI
Sbjct: 259 --------------------------------------------------VYDPVGQCWI 268
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ W G L+GGCCRT
Sbjct: 269 GTTEIDDFAAQARQWYAVGARLIGGCCRT 297
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D H S GE T+V +P Q+ A+G+NC P + LI +++ P+VVYPNS
Sbjct: 199 DGAHTSRGEPITEVVAE-IAAHP-QVAAIGINCTAPRFIPDLIRAIRSVTTKPIVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEVYD 261
>gi|449305067|gb|EMD01074.1| hypothetical protein BAUCODRAFT_60756 [Baudoinia compniacensis UAMH
10762]
Length = 318
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 173/396 (43%), Gaps = 110/396 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG +++L D+ HPLWS L D++ Q H D+ AGADI +T SYQAS
Sbjct: 18 IIDGALATELEARGHDL--NHPLWSGKLLRDDPDSIEQIHHDYYLAGADIAITASYQAST 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + L D S +LIK SV A AR ++
Sbjct: 76 QGLSDHFGLKEDESIELIKRSVRL--------AQRARCQA-------------------Y 108
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R GS I +D R +LIAGSVGPYGA L +GSEYRGDY
Sbjct: 109 RTGS---------------------IAED--RKLLIAGSVGPYGAYLANGSEYRGDYQRS 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
V E + +HRPRI+AL++AG D+LA+ET+P+S E + L LL E+ AW+S + +
Sbjct: 146 VEEFQI--FHRPRIRALIDAGVDLLALETMPSSPEIEALVSLLNIEFADATAWVSCTLSN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV--YPNS 302
KH+S+G V + + +Q++A G NC +L + + P+V+ Y NS
Sbjct: 204 AKHLSDGSPTEAVLKLAF--ESEQVVAFGFNCYSS-PDDALTRSISRQGPPVVLLCYANS 260
Query: 303 GEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W QK W
Sbjct: 261 GE----------------------SWDAEQKTW--------------------------- 271
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R D + + + + V W GV L+GGCCRT D
Sbjct: 272 RGGDASVKQGLSEEVCMWKAHGVRLMGGCCRTTPRD 307
>gi|294625945|ref|ZP_06704557.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599740|gb|EFF43865.1| homocysteine methyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 321
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 171/395 (43%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A+A++A R+D ++ P+ A L
Sbjct: 83 LGFAAR-GLDVAQAQALIARSV-----ALAVQA-----RADHL--------TLHPHAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AG VGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGLVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P+ E L +LL+ ++P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSVSEIVALRQLLQHDFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
H+S+G QV Q+IAVGVNC+ ++ + L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGVNCIALDQATAALHSLSALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
R + WL G L+GGCCRT D
Sbjct: 276 HAGRGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G QV Q+IAVGVNC+ + + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGVNCIALDQATAALHSLSALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|308187844|ref|YP_003931975.1| homocysteine S-methyltransferase [Pantoea vagans C9-1]
gi|308058354|gb|ADO10526.1| homocysteine S-methyltransferase [Pantoea vagans C9-1]
Length = 311
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 172/393 (43%), Gaps = 110/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D LWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 17 ILDGALATELEARGCHLADA--LWSAKVLMENPELIYQVHYDYFVAGARCAITASYQATP 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD S LI SV+ + A
Sbjct: 75 QGFAT-RGLDEAQSLALIAQSVELARRA-------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L A+ +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 102 ------RHDY--------------LAVRPDAKTLLVAGSVGPYGAFLADGSEYRGDYA-- 139
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ EA M +HRPR+QAL+ AGAD+LA ET+P+ EAQ L +LL E+P +AW +F+ D
Sbjct: 140 LPEAEMMAFHRPRVQALLAAGADLLACETLPSFAEAQALVKLLAEFPESRAWFTFTLHDA 199
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
HIS+G ++V + N P Q++A+G+NCV V+ + QL + + PLVVYPNSGE
Sbjct: 200 GHISDGTPLSEVV-SWLNQQP-QVVAIGINCVALESVTPALHQLQRLTDKPLVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YDA + W
Sbjct: 258 --------------------------------------------------QYDADSKTWH 267
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + +W G L+GGCCRT D
Sbjct: 268 SAPSGCTLHDKLDEWQQAGAKLIGGCCRTSPND 300
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D HIS+G ++V + N P Q++A+G+NCV V+P + QL + + PLVVYPNS
Sbjct: 198 DAGHISDGTPLSEVV-SWLNQQP-QVVAIGINCVALESVTPALHQLQRLTDKPLVVYPNS 255
Query: 569 GERYDFHLADEKN 581
GE+YD AD K
Sbjct: 256 GEQYD---ADSKT 265
>gi|422884262|ref|ZP_16930711.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK49]
gi|332360695|gb|EGJ38504.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK49]
Length = 315
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 174/414 (42%), Gaps = 125/414 (30%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L +G + G LWS+ +L + H +++A +DI+ T+SYQA
Sbjct: 13 IIILDGALGTELER-LGYDVSGK-LWSAQYLLDQPQIIQDVHESYVRADSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEA-----IALEATHARIRSDDPARDILIAGSV 118
SI F+E L + Y L+K +V ++A I L + R
Sbjct: 71 SIPAFIE-AGLTPEKGYNLLKETVFLAQKAIENIWIGLSPEEQKQR-------------- 115
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
PY L+AGSVGPY A L DGSEY
Sbjct: 116 -PYS-------------------------------------LVAGSVGPYAAYLADGSEY 137
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAW 237
GDY +SE +HRPRIQAL+EAG+D+LAIETIP EA + +LL E+P +A+
Sbjct: 138 TGDY--QLSEEEYRNFHRPRIQALLEAGSDLLAIETIPNGAEAAAILQLLAEEFPQAEAY 195
Query: 238 LSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
LSF + + IS+G ++ Q++AVG NC P +++ L++ L + N P
Sbjct: 196 LSFVAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDGLGQVCNKPF 253
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
+ YPNSGE Y
Sbjct: 254 LTYPNSGE--------------------------------------------------TY 263
Query: 357 DAVNARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ + W D R L E W ++GV L GGCCRT ED + R
Sbjct: 264 NGLTKTWHDDPEQGRSLLENSKL----WQNQGVRLFGGCCRTRPEDIAQLSKRF 313
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTYPNSGETYN 264
>gi|422862676|ref|ZP_16909308.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK408]
gi|327474149|gb|EGF19559.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK408]
Length = 315
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 176/399 (44%), Gaps = 111/399 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + D+ LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELESRGYDV--SGKLWSAQYLLDQPQIIQNVHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + +Y L+K +V ++A
Sbjct: 71 SIPAFVE-AGLTPEKAYDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY GD
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPYPLVAGSVGPYAAYLADGSEYTGD 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIET P EA + RLL E+P +A+LSF
Sbjct: 141 Y--QLSEEEFRDFHRPRIQALLEAGSDLLAIETTPNGAEAAAILRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNS E Y+ +
Sbjct: 257 PNSSE--------------------------------------------------TYNGL 266
Query: 360 NARWIDRDLCE-PVDKYVTDWLDEGVALVGGCCRTYAED 397
W D + E + + W ++GV L GGCCRT ED
Sbjct: 267 TKTWHDDPVQERSLLENSKLWQNQGVRLFGGCCRTRPED 305
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNS E Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTYPNSSETYN 264
>gi|313892138|ref|ZP_07825731.1| homocysteine S-methyltransferase [Dialister microaerophilus UPII
345-E]
gi|313119276|gb|EFR42475.1| homocysteine S-methyltransferase [Dialister microaerophilus UPII
345-E]
Length = 306
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 163/391 (41%), Gaps = 117/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG F+S+L ++ D LWS+ L + V + H + ++GA I +T SYQA +
Sbjct: 15 VIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHESYFESGAGIAITGSYQAHV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ ++ + +LIK SV K+ AR+
Sbjct: 73 QGLLK-KGFTHEKAIELIKLSVKLAKK----------------ARE-------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ P R + IA +VGPYGA L DGSEY G+Y
Sbjct: 102 -----------------------NCLKKHPERKLAIAAAVGPYGAYLADGSEYVGNYGLS 138
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + E+H +I+AL D A ETIP+ E + +L+ + W +FSCKD+
Sbjct: 139 VKE--LEEFHEEKIEALASENPDFFAFETIPSFDEVRAYVNILKRHENITGWFTFSCKDE 196
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYPNSGE 304
KHIS G ++VA+ N Q+ A+GVNC +P + LI E K + P+ VYPN+GE
Sbjct: 197 KHISEGVEISEVAKFLDKEN--QVHAIGVNCTKPEYIEPLICEIKKATDKPVAVYPNTGE 254
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+YD V W
Sbjct: 255 --------------------------------------------------KYDPVTKTWS 264
Query: 365 DRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
EPVD KY W + G L+GGCCRT
Sbjct: 265 G----EPVDFIKYAKRWYESGARLIGGCCRT 291
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLI-EQLKTENIPLVVYPNS 568
D+KHIS G ++VA+ N Q+ A+GVNC +P + PLI E K + P+ VYPN+
Sbjct: 195 DEKHISEGVEISEVAKFLDKEN--QVHAIGVNCTKPEYIEPLICEIKKATDKPVAVYPNT 252
Query: 569 GERYD 573
GE+YD
Sbjct: 253 GEKYD 257
>gi|365903363|ref|ZP_09441186.1| homocysteine methyltransferase [Lactobacillus malefermentans KCTC
3548]
Length = 316
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 168/394 (42%), Gaps = 106/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + DI + LWS+ L +A+ H+ + AGA + +TN+YQA+I
Sbjct: 15 VVDGAMATELEKH--DIDTDNDLWSAMALIEQPEAIYDVHKSYFDAGAQVAITNTYQANI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ + D + ++I ++V+ K R+ D A L G
Sbjct: 73 DAFVK-AGVPADDAQKMITNAVEIAK------------RARDDAWTALTPAEQAAKGG-- 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
AGSVGPYGA L +G+EY GDY
Sbjct: 118 ---------------------------------FFAAGSVGPYGAFLANGAEYTGDYNLS 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
V E + ++HR R+Q L +G D+ A ET P KEAQ L LL E+P Q AW+SFS +D
Sbjct: 145 VDE--LKDFHRSRMQLLANSGVDLFAFETQPQFKEAQSLANLLESEFPQQSAWISFSIRD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
K + +G S + Y + DQ+IA+GVNC +++ I+ +K + P++VYPN+G
Sbjct: 203 SKTLCDGTSLAKA--VSYFNDHDQIIAIGVNCTAMTNITAAIQTIKAVTDKPIIVYPNTG 260
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 261 E--------------------------------------------------TYDPKTKTW 270
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
++ ++ WL G ++GGCCRT +D
Sbjct: 271 QSQEEEASFEQLTPAWLKAGARMIGGCCRTTPKD 304
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D K + +G S + Y + DQ+IA+GVNC ++ I+ +K + P++VYPN+
Sbjct: 202 DSKTLCDGTSLAKA--VSYFNDHDQIIAIGVNCTAMTNITAAIQTIKAVTDKPIIVYPNT 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GETYD 264
>gi|242041729|ref|XP_002468259.1| hypothetical protein SORBIDRAFT_01g042580 [Sorghum bicolor]
gi|241922113|gb|EER95257.1| hypothetical protein SORBIDRAFT_01g042580 [Sorghum bicolor]
Length = 323
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 171/393 (43%), Gaps = 108/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T V + H +++AGADI++++SYQA+I
Sbjct: 16 VIDGGFATQLEALGADIND--PLWSAACLITRPHLVKEVHMQYLEAGADIIISSSYQATI 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ AR S D A D+L S+
Sbjct: 74 PGFL-------------------------------ARGMSVDEAEDLL--------RTSV 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ E R ++ + ++R L+A SVG YGA L DGSEY G Y
Sbjct: 95 KLAVEARDEFWKSALRKAKPIYNR---------ALVAASVGSYGAYLADGSEYSGSYGAD 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 146 ITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEKVQVPSWICFSSVD 205
Query: 245 DKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
K++ +GESF C + D++ VGVNC P + +I + K + + VYPN
Sbjct: 206 GKNLCSGESFAD----CLKILDTSDKVAVVGVNCTPPQFIEGIICEFKKQTKKAIAVYPN 261
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W + K WL C + +DA+
Sbjct: 262 SGEV----------------------WDGRAKRWLPVECLGH-----------KSFDALA 288
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R W + G +L+GGCCRT
Sbjct: 289 KR----------------WQEAGASLIGGCCRT 305
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYP 566
D K++ +GESF C + D++ VGVNC P + +I + K + + VYP
Sbjct: 205 DGKNLCSGESFAD----CLKILDTSDKVAVVGVNCTPPQFIEGIICEFKKQTKKAIAVYP 260
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 261 NSGEVWD 267
>gi|453063721|gb|EMF04699.1| homocysteine methyltransferase [Serratia marcescens VGH107]
Length = 312
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 175/400 (43%), Gaps = 109/400 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + + Q H D+ AGA +T SYQA+
Sbjct: 18 ILDGALATELEARGCDLTD--PLWSAKVLIENPELIYQVHLDYFNAGAQCAITASYQATP 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + S LI SV + A
Sbjct: 76 QGFSR-RGLDQEQSLALIAKSVQLAQRA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RGDY L A +LIAGSVGPYGA L DGSEYRGDY
Sbjct: 103 ------RGDY--------------LAAHPQAAPLLIAGSVGPYGAYLADGSEYRGDY--R 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+++ +HRPR+ AL AG D+LA ET+P+ E Q L LL+E+P AW +F+ +D
Sbjct: 141 LAQDDFIAFHRPRLAALAAAGVDLLACETLPSFAELQALLTLLQEFPTLGAWFAFTLRDS 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+H+S+G T+V + NP Q++A+G+NC+ V+ + QL + PL+VYPNSGE
Sbjct: 201 QHLSDGTPLTEVL-SALRGNP-QVLAIGINCIALDKVAPALRQLGALADKPLLVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
H A+ K W +C E+ L
Sbjct: 259 HYDAVS---------------------KTW--HACGGEHGSLA----------------- 278
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
T+W G L+GGCCRT +D + R
Sbjct: 279 ---------DQATEWRALGAQLIGGCCRTTPQDIRAIAAR 309
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G T+V + NP Q++A+G+NC+ V+P + QL + PL+VYPNS
Sbjct: 199 DSQHLSDGTPLTEVL-SALRGNP-QVLAIGINCIALDKVAPALRQLGALADKPLLVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
>gi|224111688|ref|XP_002315941.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222864981|gb|EEF02112.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 329
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 177/406 (43%), Gaps = 106/406 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL + I D PLWS+ L D + + H ++++AGADI++T+SYQA++
Sbjct: 22 VIDGGFATQLERHGATIND--PLWSALCLIKDPDLIKRVHLEYLEAGADILVTSSYQATL 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L+K SV EA
Sbjct: 80 PGFLS-RGLSAEEGELLLKKSVTLAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + V ++R L+A S+G YGA L DGSEY G Y
Sbjct: 107 ------RNKFWDAVERNPGHSYNR---------ALVAASIGSYGAYLADGSEYSGCYGPD 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
V+ + ++HR R+Q LV+A D+LA ETIP EAQ LL E + +W+ FSC D
Sbjct: 152 VNLEKLKDFHRRRLQVLVKASPDLLAFETIPNKLEAQACVELLEEENINIPSWICFSCVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
++ +GESF Q D++ AVG+NC P + SLI + K TE + +VVYPNS
Sbjct: 212 GENAPSGESFQQCLEAIN--KSDRVKAVGINCAPPHFIESLICKFKELTEKL-IVVYPNS 268
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W + K WL +C
Sbjct: 269 GE----------------------VWDGRAKRWLPSTC---------------------- 284
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
D D + + T W D G +L+GGCCRT + L D
Sbjct: 285 --FDDD---KFEVFATRWHDLGASLIGGCCRTTPSTIQAISKVLKD 325
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D ++ +GESF Q D++ AVG+NC P + LI + K TE + +VVYPN
Sbjct: 211 DGENAPSGESFQQCLEAINK--SDRVKAVGINCAPPHFIESLICKFKELTEKL-IVVYPN 267
Query: 568 SGERYD 573
SGE +D
Sbjct: 268 SGEVWD 273
>gi|256592582|gb|ACV03421.1| selenocysteine methyltransferase [Astragalus pectinatus]
Length = 338
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 190/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG ++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 18 IIAGGLGTELERHGADLND--PLWSAKCLYSSPHLIHQVHLDYLENGADIILTASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGS+G YGA L DGSE+ G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKPRP---ILIAGSIGSYGAYLADGSEFSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSF 240
Y + + T+ ++HR R+Q L ++G D+LA +P EAQ LL E AW +F
Sbjct: 152 YGDAIKLETLKDFHRRRVQILADSGVDLLAFGAVPNKLEAQAYADLLEEENIITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD ++ +G+S + +A +C D+++AVG++C P + LI LK P+
Sbjct: 212 NSKDGTNVVSGDSIEECGSIAESC-----DKVVAVGISCTPPRFIHDLIHLLKKVTAKPV 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE I +EW
Sbjct: 267 VIYPNSGETYDGIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G ++VGGCCRT A DT+ +++
Sbjct: 286 ---NSGVTDGDFVSYVDK----WCESGASIVGGCCRT-APDTIRGIYKI 326
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG++C P + LI LK P+V+Y
Sbjct: 215 DGTNVVSGDSIEECGSIAESC-----DKVVAVGISCTPPRFIHDLIHLLKKVTAKPVVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
>gi|414880278|tpg|DAA57409.1| TPA: homocysteine S-methyltransferase 4 [Zea mays]
Length = 342
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 171/399 (42%), Gaps = 119/399 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++L + D+ D LWS+ LA+A + + H D+++AGAD++++ SYQA+I
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSVGPYG 122
GF D S +L++ SV +EA A E + R PA
Sbjct: 84 EGFQS-RGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPA------------- 129
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
L+A SVG YGA DGSEY GDY
Sbjct: 130 -------------------------------------LVAASVGSYGAYRADGSEYSGDY 152
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
+ +++ + +HR R+Q L AG D++A ETIP EAQ+ LL E + AW SF+
Sbjct: 153 GKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLEENGIRIPAWFSFT 212
Query: 242 CKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLV 297
KD + ++G+ + VA +C ++ AVGVNC P + LI + K + P+V
Sbjct: 213 SKDGVNAASGDPINECAAVADSC-----PRVAAVGVNCTAPRFIHGLILSIKKVTSKPIV 267
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE Y
Sbjct: 268 VYPNSGES--------------------------------------------------YV 277
Query: 358 AVNARWIDRDLCEPVDKYVT---DWLDEGVALVGGCCRT 393
A W+D D D +V+ +W G AL+GGCCRT
Sbjct: 278 AETNEWVDSDGATGTDDFVSRVGEWRRAGAALIGGCCRT 316
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYDFHLADEKNNCVKSD 587
++ AVGVNC P + LI +K + P+VVYPNSGE Y E N V SD
Sbjct: 237 RVAAVGVNCTAPRFIHGLILSIKKVTSKPIVVYPNSGESY----VAETNEWVDSD 287
>gi|452090884|gb|AGF95112.1| homocysteine S-methyltransferase, partial [Prunus persica]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 181/393 (46%), Gaps = 112/393 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L + D+ D PLWS+ L ++ V + H D++ AGA++++T SYQA+I
Sbjct: 59 VLDGGFATELERHGADLND--PLWSAKCLISSPHLVRRVHLDYLDAGANVIITASYQATI 116
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + LI+ SV+ IA+EA R+I
Sbjct: 117 QGF-EAKGFSKEEAKALIRKSVE-----IAIEA-----------REIYF----------- 148
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D + R R +L+A SVG YGA L DGSEY G+Y +
Sbjct: 149 -DKLQSR------------------------RPVLVAASVGSYGAYLADGSEYSGNYGDA 183
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ T+ ++HR R+Q L +GAD++A ET P EA+ LL E AW SF+ KD
Sbjct: 184 VTVETLKDFHRERVQILANSGADLIAFETTPNKIEAKAYAELLEEEGIDIPAWFSFTSKD 243
Query: 245 DKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S T +A +C Q++AVG+NC P + L+ + K + P+V+YP
Sbjct: 244 GINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHGLVSLIRKVTSKPIVIYP 298
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE L ++W +SGE
Sbjct: 299 NSGETYDG---------------LTKQWVQ--------------------SSGE------ 317
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+D + D + W + G +L GGCCRT
Sbjct: 318 ---VDEEF---ADIVIGKWHEAGASLFGGCCRT 344
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D ++ +G+S T +A +C Q++AVG+NC P + L+ + K + P+V+Y
Sbjct: 243 DGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHGLVSLIRKVTSKPIVIY 297
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 298 PNSGETYD 305
>gi|420145926|ref|ZP_14653372.1| Homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402412|gb|EJN55757.1| Homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 311
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 171/402 (42%), Gaps = 111/402 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D LWS+ L T +AV H + AGAD+ +TN+YQA++
Sbjct: 18 ILDGAMATELEKRGVDT--NSELWSARALLTDPNAVYAVHYSYFAAGADVAITNTYQANV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + L +S LI +V ++A
Sbjct: 76 PAF-EKIGLTAAASKALIAKAVQVAQQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L+ D ARD+ +AGSVGPYGA L DGSEY G Y
Sbjct: 103 ------RTDY--------------LVASDNARDLYVAGSVGPYGAYLADGSEYTGAY--Q 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ +H PRI LV +G D+LAIET P E Q + LL+ E+P Q AW+S S KD
Sbjct: 141 LDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQEEFPQQAAWVSLSIKD 200
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+ + +G +V T N P Q++A+GVNC V+++++ L+ + PL+VYPNSG
Sbjct: 201 AQTLCDGTPLAEVV-TYLNQQP-QVVALGVNCTALTNVTAVLQTLQPLTDKPLLVYPNSG 258
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E E P+ K W QK FS
Sbjct: 259 E-----EYDPSDK----------TWHMQKNTPQFS------------------------- 278
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ V W G L+GGCCRT D + L
Sbjct: 279 ----------ELVPKWQATGAQLIGGCCRTTPGDIKQISQIL 310
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D + + +G +V T N P Q++A+GVNC V+ +++ L+ + PL+VYPNS
Sbjct: 200 DAQTLCDGTPLAEVV-TYLNQQP-QVVALGVNCTALTNVTAVLQTLQPLTDKPLLVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GEEYD 262
>gi|325978443|ref|YP_004288159.1| homocysteine methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178371|emb|CBZ48415.1| homocysteine methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 316
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 158/302 (52%), Gaps = 57/302 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + H ++++GADI+ T+SYQA++
Sbjct: 15 ILDGALGTELEKRGYDV--SGKLWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +F + K ++D I+L T AR ARD G L
Sbjct: 73 QGLKDFGLSE--------KEALDI----ISLTVTLAR-----QARDNFWNG--------L 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D ++ + Y LI+G VGPY A L DGSEY G+Y
Sbjct: 108 SDEAKKKRPYP-----------------------LISGDVGPYAAYLADGSEYNGNY--Q 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+++ +HRPRIQAL+ AG+D L IETIP EA+ L LL E+P +A++SF+ +D
Sbjct: 143 LTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT--ENIPLVVYPNS 302
DKHIS+G +VA C +P Q++A G+NC P ++S L+++++T PLV YPNS
Sbjct: 203 DKHISDGTPIEEVAALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPNS 260
Query: 303 GE 304
GE
Sbjct: 261 GE 262
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT--ENIPLVVYPN 567
DDKHIS+G +VA C +P Q++A G+NC P ++S L+++++T PLV YPN
Sbjct: 202 DDKHISDGTPIEEVAALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPN 259
Query: 568 SGERYD 573
SGE YD
Sbjct: 260 SGEIYD 265
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 55/146 (37%), Gaps = 49/146 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFS--------------------- 338
++G L IETIP EA+ L LL E+P +A++SF+
Sbjct: 161 SAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVAALCE 220
Query: 339 -----------CKTENI---------------PLVVYPNSGERYDAVNARWID-RDLCEP 371
C + + PLV YPNSGE YD W D
Sbjct: 221 QSPQILAFGINCSSPAVISGLLKRIRTVSPKKPLVTYPNSGEIYDGATQTWKSIPDNSHT 280
Query: 372 VDKYVTDWLDEGVALVGGCCRTYAED 397
+ + W G +VGGCCRT ED
Sbjct: 281 LLENSRAWHQLGAKIVGGCCRTSPED 306
>gi|162464417|ref|NP_001105014.1| homocysteine S-methyltransferase 4 [Zea mays]
gi|50400642|sp|Q9FUM7.1|HMT4_MAIZE RecName: Full=Homocysteine S-methyltransferase 4; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
4; Short=SMM:Hcy S-methyltransferase 4; AltName:
Full=ZmHMT-4
gi|10732791|gb|AAG22540.1|AF297047_1 homocysteine S-methyltransferase-4 [Zea mays]
Length = 342
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 171/399 (42%), Gaps = 119/399 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++L + D+ D LWS+ LA+A + + H D+++AGAD++++ SYQA+I
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSVGPYG 122
GF D S +L++ SV +EA A E + R PA
Sbjct: 84 EGFQS-RGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPA------------- 129
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
L+A SVG YGA DGSEY GDY
Sbjct: 130 -------------------------------------LVAASVGSYGAYRADGSEYSGDY 152
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
+ +++ + +HR R+Q L AG D++A ETIP EAQ+ LL E + AW SF+
Sbjct: 153 GKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLEENGIRIPAWFSFT 212
Query: 242 CKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLV 297
KD + ++G+ + VA +C ++ AVGVNC P + LI + K + P+V
Sbjct: 213 SKDGVNAASGDPINECAAVADSCPRVD-----AVGVNCTAPRFIHGLILSIKKVTSKPIV 267
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE Y
Sbjct: 268 VYPNSGET--------------------------------------------------YV 277
Query: 358 AVNARWIDRDLCEPVDKYVT---DWLDEGVALVGGCCRT 393
A W+D D D +V+ +W G AL+GGCCRT
Sbjct: 278 AETNEWVDSDGATGTDDFVSRVGEWRRAGAALIGGCCRT 316
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 537 AVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYDFHLADEKNNCVKSD 587
AVGVNC P + LI +K + P+VVYPNSGE Y E N V SD
Sbjct: 240 AVGVNCTAPRFIHGLILSIKKVTSKPIVVYPNSGETY----VAETNEWVDSD 287
>gi|374338104|ref|YP_005094814.1| Homocysteine S-methyltransferase [Streptococcus macedonicus ACA-DC
198]
gi|372284214|emb|CCF02472.1| Homocysteine S-methyltransferase [Streptococcus macedonicus ACA-DC
198]
Length = 315
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 156/301 (51%), Gaps = 56/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + H ++++GADI+ T+SYQA++
Sbjct: 15 ILDGALGTELEKRGYDV--SGKLWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +F L + +I +V +EA RD G L
Sbjct: 73 QGLEDF-GLSEKEALDIISLTVTLAREA----------------RDNFWNG--------L 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D ++ + Y LI+G VGPY A L DGSEY G+Y +
Sbjct: 108 SDEAKKKRPYP-----------------------LISGDVGPYAAYLADGSEYNGNYQQT 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
E + +HRPRIQAL+ AG+D L IETIP EA+ L LL E+P +A++SF+ +D
Sbjct: 145 QEEYQV--FHRPRIQALLSAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPNSG 303
DKHIS+G +VA C +P Q++A G+NC P ++S L+++++T + PLV YPNSG
Sbjct: 203 DKHISDGTPIEEVADLC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNSG 260
Query: 304 E 304
E
Sbjct: 261 E 261
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
DDKHIS+G +VA C +P Q++A G+NC P ++S L+++++T + PLV YPNS
Sbjct: 202 DDKHISDGTPIEEVADLC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEIYD 264
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFS--------------------- 338
++G L IETIP EA+ L LL E+P +A++SF+
Sbjct: 161 SAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVADLCE 220
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWID-RDLCEPV 372
C + + PLV YPNSGE YD W D +
Sbjct: 221 QSPQILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNSGEIYDGATQTWKSIPDNSHTL 280
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT +D
Sbjct: 281 LENSRAWHQLGAKIVGGCCRTSPKD 305
>gi|285019246|ref|YP_003376957.1| homocysteine s-methyltransferase [Xanthomonas albilineans GPE PC73]
gi|283474464|emb|CBA16965.1| probable homocysteine s-methyltransferase protein [Xanthomonas
albilineans GPE PC73]
Length = 316
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 181/402 (45%), Gaps = 111/402 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ D PLWS+ L + + Q H D+ AGA +T SYQA++
Sbjct: 19 VLDGALATELERFGCDLDD--PLWSAKVLLEQPERIRQVHLDYFVAGAQCAITASYQATL 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + +D + +LI S + ++A R D
Sbjct: 77 QG-LAARGIDPAQARRLIARSAELAQQA----------RRD------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
YR + + A +L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 107 -----YRAAHPQ------------------AGTLLVAGSVGPYGAYLADGSEYRGDYV-- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+ A M ++HRPRI ALV+AG D+LA ET P+S E L LL E+P AW + + +D
Sbjct: 142 VAPARMRDFHRPRITALVDAGVDLLAFETQPSSAEIAALLALLEEFPQSVAWFACTLRDP 201
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H+S+G + + +P Q++A+GVNC+ P + ++ +E L T +PLVVYPNSGE
Sbjct: 202 THLSDGTPLRETV-ALLDGHP-QVVALGVNCIAPALAAAALEHLSTLTRLPLVVYPNSGE 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW- 363
RYDA + RW
Sbjct: 260 --------------------------------------------------RYDAGDKRWK 269
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D + + +++ W G L+GGCCRT + + L
Sbjct: 270 ADGAVACALVEHIDRWRAAGARLIGGCCRTTPQQIAQLARCL 311
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G + + +P Q++A+GVNC+ P + + +E L T +PLVVYPNS
Sbjct: 200 DPTHLSDGTPLRETV-ALLDGHP-QVVALGVNCIAPALAAAALEHLSTLTRLPLVVYPNS 257
Query: 569 GERYD 573
GERYD
Sbjct: 258 GERYD 262
>gi|163848631|ref|YP_001636675.1| homocysteine methyltransferase [Chloroflexus aurantiacus J-10-fl]
gi|163669920|gb|ABY36286.1| homocysteine S-methyltransferase [Chloroflexus aurantiacus J-10-fl]
Length = 322
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 161/389 (41%), Gaps = 107/389 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + H D+ AGAD+ +T SYQA+I
Sbjct: 21 ILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM + D + L++ SV + ARD A G L
Sbjct: 79 PGFMA-RGIAPDQAILLLQRSVALAQA----------------ARDQFWADPANREG-RL 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R L+A SVGPYGA L DGSEYRG+Y
Sbjct: 121 RP--------------------------------LVAASVGPYGAFLHDGSEYRGNYGLS 148
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + E+HRPR+ AL A D+ A ETIP EA+ L LL E+PH AW+SFS +D
Sbjct: 149 VAE--LIEFHRPRMAALAAARPDLFACETIPCLDEARALVALLPEFPHLTAWISFSARDG 206
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H + GE + A +P Q+ A+GVNC P + LI ++ + P+VVYPNSGE
Sbjct: 207 AHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAVQAVTDKPIVVYPNSGE 264
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V WI
Sbjct: 265 --------------------------------------------------VYDPVGQCWI 274
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ W G L+GGCCRT
Sbjct: 275 GTTEIDDFVAQARQWYAMGARLIGGCCRT 303
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H + GE + A +P Q+ A+GVNC P + LI ++ + P+VVYPNS
Sbjct: 205 DGAHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAVQAVTDKPIVVYPNS 262
Query: 569 GERYD 573
GE YD
Sbjct: 263 GEVYD 267
>gi|357488709|ref|XP_003614642.1| Homocysteine s-methyltransferase [Medicago truncatula]
gi|355515977|gb|AES97600.1| Homocysteine s-methyltransferase [Medicago truncatula]
Length = 326
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 169/390 (43%), Gaps = 102/390 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGGF++QL + I D PLWS+ L + + H ++++AGADI++T+SYQA+I
Sbjct: 21 VTDGGFATQLEKHGAFIND--PLWSAICLIKQPHLIKKVHMEYLEAGADILVTSSYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L++ SV EA RD + A
Sbjct: 79 PGFLS-KGLSIEEGESLLQRSVKLAVEA----------------RDSFWSS------AKR 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
G++YR L+A S+G YGA L DGSEYRG Y
Sbjct: 116 NPGNKYR-------------------------RALVAASIGSYGAYLADGSEYRGLYGPD 150
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q +W+ F+ D
Sbjct: 151 VSLVKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEINVQIPSWICFTSVD 210
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
++ +GESF N ++ AVG+NC P + SLI + K N +VVYPNSG
Sbjct: 211 GENAPSGESFQYCLEVINKSN--KVEAVGINCAPPHFMESLIPKFKQLTNKAIVVYPNSG 268
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E I K WL C +
Sbjct: 269 EVWDGI---------------------AKKWLPSKC-----------------------F 284
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D D Y T W + G ++GGCCRT
Sbjct: 285 HDDDF----GFYATRWRELGAKIIGGCCRT 310
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D ++ +GESF N ++ AVG+NC P + LI + K N +VVYPNS
Sbjct: 210 DGENAPSGESFQYCLEVINKSN--KVEAVGINCAPPHFMESLIPKFKQLTNKAIVVYPNS 267
Query: 569 GERYD 573
GE +D
Sbjct: 268 GEVWD 272
>gi|222526567|ref|YP_002571038.1| homocysteine methyltransferase [Chloroflexus sp. Y-400-fl]
gi|222450446|gb|ACM54712.1| homocysteine S-methyltransferase [Chloroflexus sp. Y-400-fl]
Length = 319
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 161/389 (41%), Gaps = 107/389 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D PLWS+ L + H D+ AGAD+ +T SYQA+I
Sbjct: 18 ILDGALATELERRGCDLAD--PLWSAKVLIENPSLIQAVHADYFAAGADVAITASYQATI 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM + D + L++ SV + ARD A G L
Sbjct: 76 PGFMA-RGIAPDQAILLLQRSVALAQA----------------ARDQFWADPANREG-RL 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R L+A SVGPYGA L DGSEYRG+Y
Sbjct: 118 RP--------------------------------LVAASVGPYGAFLHDGSEYRGNYGLS 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + E+HRPR+ AL A D+ A ETIP EA+ L LL E+PH AW+SFS +D
Sbjct: 146 VAE--LIEFHRPRMAALAAARPDLFACETIPCLDEARALVALLPEFPHLTAWISFSARDG 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
H + GE + A +P Q+ A+GVNC P + LI ++ + P+VVYPNSGE
Sbjct: 204 AHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAVQAVTDKPIVVYPNSGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V WI
Sbjct: 262 --------------------------------------------------VYDPVGQCWI 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ W G L+GGCCRT
Sbjct: 272 GTTEIDDFVAQARQWYAMGARLIGGCCRT 300
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H + GE + A +P Q+ A+GVNC P + LI ++ + P+VVYPNS
Sbjct: 202 DGAHTAQGEPIAECAAE-IAAHP-QVAAIGVNCTAPRFLPDLIRAVQAVTDKPIVVYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEVYD 264
>gi|115451621|ref|NP_001049411.1| Os03g0221200 [Oryza sativa Japonica Group]
gi|108706901|gb|ABF94696.1| Homocysteine S-methyltransferase 1, putative, expressed [Oryza
sativa Japonica Group]
gi|113547882|dbj|BAF11325.1| Os03g0221200 [Oryza sativa Japonica Group]
gi|215695514|dbj|BAG90705.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 149/301 (49%), Gaps = 54/301 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T + + H +++AGAD+++++SYQA+I
Sbjct: 17 VIDGGFATQLEALGADIND--PLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ AR +L+ + G S+
Sbjct: 75 PGFL---------------------------------------ARGMLLEEAEGLLRRSI 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E R ++ + + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 96 ELALEARDEFWKSTLRKSKPVYNR---------ALVAASIGSYGAYLADGSEYSGSYGED 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 147 ITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEENIQVPSWICFSSVD 206
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
K++ +GESF + + + D++ VGVNC P + +I +LK + + VYPNSG
Sbjct: 207 GKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRELKKQTKKAIAVYPNSG 264
Query: 304 E 304
E
Sbjct: 265 E 265
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K++ +GESF + + + D++ VGVNC P + +I +LK + + VYPNS
Sbjct: 206 DGKNLCSGESFAECLQ--FLNASDKVTIVGVNCTPPQFIEGIIRELKKQTKKAIAVYPNS 263
Query: 569 GERYD 573
GE +D
Sbjct: 264 GEIWD 268
>gi|428149023|ref|ZP_18996858.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427540999|emb|CCM92996.1| Homocysteine S-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 193
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 123/239 (51%), Gaps = 56/239 (23%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AGSVGPYGA L DGSEYRGDY S A +HRPR++AL++AGAD+LA ET+P+ E
Sbjct: 1 MAGSVGPYGAFLADGSEYRGDYQR--SAAEFQAFHRPRVEALLDAGADLLACETLPSFAE 58
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280
Q L LL+E+P +AW SF+ +D +H+S+G +V + NP Q++AVG+NC+
Sbjct: 59 IQALAALLQEYPRARAWYSFTLRDAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALE 116
Query: 281 MVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+ + L + +PLVVYPNSGEH
Sbjct: 117 NTPAALAHLHSLTALPLVVYPNSGEH---------------------------------- 142
Query: 340 KTENIPLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
YDAV+ W + C + Y+ WL G L+GGCCRT +D
Sbjct: 143 ----------------YDAVSKTWHHHGEACASLADYLPQWLAAGAKLIGGCCRTTPKD 185
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G +V + NP Q++AVG+NC+ + L + +PLVVYPNS
Sbjct: 82 DAEHLSDGTPLREVMAALAD-NP-QVVAVGINCIALENTPAALAHLHSLTALPLVVYPNS 139
Query: 569 GERYD 573
GE YD
Sbjct: 140 GEHYD 144
>gi|452847522|gb|EME49454.1| hypothetical protein DOTSEDRAFT_68274 [Dothistroma septosporum
NZE10]
Length = 339
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 175/395 (44%), Gaps = 103/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFL--ATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
++DG +++L D+ HPLWS + +++ H D+ +AGA+I +T SYQA
Sbjct: 18 ILDGALATELEVRGHDL--NHPLWSMKVIQDPAGIESIKNIHLDYFRAGANIAITASYQA 75
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S G E L + + + +V+ + A RDI
Sbjct: 76 STQGLREHFQLSEAEAQKAVARTVELAQNA----------------RDIA---------- 109
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
E M H L L+AGSVGPYGA L DGSEYRGDYV
Sbjct: 110 ---------------YQEGAMPRSHPL---------LVAGSVGPYGAYLSDGSEYRGDYV 145
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
+ E ++HRPR+QAL +AG D+ A ET+P E + L LL ++P AWLS +
Sbjct: 146 RSIQE--FRDFHRPRMQALCDAGVDLFAFETMPNMTEIKALLDLLETDFPQAVAWLSCTT 203
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS--SLIEQLKTENIPLVVYP 300
+D H+S+G ++ V N + +Q++A G+NCV P+ S +L + +PLV YP
Sbjct: 204 RDADHLSDGTTW-NVLLDLVNRH-EQIVAFGINCV-PMTSSTNTLRSISQHTTLPLVCYP 260
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYD-A 358
NSGE EW + K W G+R D A
Sbjct: 261 NSGE----------------------EWDASTKTW-----------------RGQRPDEA 281
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + + DW++ G +L+GGCCRT
Sbjct: 282 LATSELSSSARSSLADSARDWIENGASLIGGCCRT 316
>gi|325929571|ref|ZP_08190685.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas perforans
91-118]
gi|346724291|ref|YP_004850960.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|325540081|gb|EGD11709.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Xanthomonas perforans
91-118]
gi|346649038|gb|AEO41662.1| homocysteine methyltransferase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 321
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 168/395 (42%), Gaps = 112/395 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ L + + Q HRD+ AGA +T SYQA+
Sbjct: 25 VLDGALATELEQRGCDLNDA--LWSARVLMEQPELIYQVHRDYFAAGAQCAITASYQATP 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + LI SV A A+ R+D ++ PY A L
Sbjct: 83 LGFAA-RGLDAAQAQALIARSV----------ALAAQARADHL--------TLHPYAAPL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
W +AGSVGPYGA L DGSEYRGDYV
Sbjct: 124 ---------------------W-------------VAGSVGPYGAYLADGSEYRGDYVLP 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HRPRI AL EAG D+LA ET+P++ E L +LL+ E+P AW SF+ +D
Sbjct: 150 IEQ--LMDFHRPRIAALAEAGVDLLACETLPSASEIVALRQLLQHEFPQLHAWFSFTLRD 207
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR-PLMVSSLIEQLKTENIPLVVYPNSG 303
H+S+G QV Q+IAVG+NC+ ++L +PLVVYPNSG
Sbjct: 208 AAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQASAALHSLAALTALPLVVYPNSG 265
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
EH YDA + RW
Sbjct: 266 EH--------------------------------------------------YDASDKRW 275
Query: 364 -IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ WL G L+GGCCRT D
Sbjct: 276 HAGHGAALTLADQHAHWLAAGARLIGGCCRTAPRD 310
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR-PLMVSPLIEQLKTENIPLVVYPNS 568
D H+S+G QV Q+IAVG+NC+ + L +PLVVYPNS
Sbjct: 207 DAAHLSDGTPLAQVVPALDACA--QVIAVGINCIALDQASAALHSLAALTALPLVVYPNS 264
Query: 569 GERYD 573
GE YD
Sbjct: 265 GEHYD 269
>gi|333394374|ref|ZP_08476193.1| homocysteine methyltransferase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336393079|ref|ZP_08574478.1| homocysteine methyltransferase [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 305
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 170/402 (42%), Gaps = 111/402 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D LWS+ L T +AV H + AGAD+ +TN+YQA++
Sbjct: 12 ILDGAMATELEKRGVDT--NSELWSARALLTDPNAVYAVHYSYFAAGADVAITNTYQANV 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + L +S LI +V ++A
Sbjct: 70 PAF-EKIGLTAAASKALIAKAVQVAQQA-------------------------------- 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY L+ D ARD+ +AGSVGPYGA L DGSEY G Y
Sbjct: 97 ------RTDY--------------LVASDNARDLYVAGSVGPYGAYLADGSEYTGAY--Q 134
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ +H PRI LV +G D+LAIET P E Q + LL+ E+P Q AW+S S KD
Sbjct: 135 LDRKAYQVFHYPRIAQLVASGVDVLAIETQPNFAEIQAVVALLQEEFPQQTAWVSLSIKD 194
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+ + +G +V T N P Q++A+GVNC V++ ++ L+ + PL+VYPNSG
Sbjct: 195 AQTLCDGTPLAEVV-TYLNQQP-QVVALGVNCTALTNVTAALQTLQPLTDKPLLVYPNSG 252
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E E P+ K W QK FS
Sbjct: 253 E-----EYDPSDK----------TWHMQKNTPQFS------------------------- 272
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ V W G L+GGCCRT D + L
Sbjct: 273 ----------ELVPKWQATGAQLIGGCCRTTPGDIEQISQIL 304
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D + + +G +V T N P Q++A+GVNC V+ ++ L+ + PL+VYPNS
Sbjct: 194 DAQTLCDGTPLAEVV-TYLNQQP-QVVALGVNCTALTNVTAALQTLQPLTDKPLLVYPNS 251
Query: 569 GERYD 573
GE YD
Sbjct: 252 GEEYD 256
>gi|303229190|ref|ZP_07315991.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516203|gb|EFL58144.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 339
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 37/303 (12%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG F ++L + +I D LWSS L + + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L+K SV +A++A + + + A D L + G L
Sbjct: 76 AGFKAH-GYGTEEALDLVKLSVR-----LAVQARNEFLEAK--ANDALTLRGI-TLGEQL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGS V + SE + + L+A SVGPYGA L DGSEYRGDY
Sbjct: 127 PDGS------VRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRGDY--G 166
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PRI E D+LA ET+P EA + R L + K AW+SFSC
Sbjct: 167 VQTEYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSC 226
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD+ HISNGE+ + A + Q+ +G+NC P V SLI+ +++ N P+ VYPN
Sbjct: 227 KDEHHISNGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPN 284
Query: 302 SGE 304
GE
Sbjct: 285 LGE 287
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 448 GSQTNDFLRDYNSPNLWI------DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 501
G QT ++L ++ P + + D CE V Y DE +A+ C +
Sbjct: 166 GVQT-EYLEVFHIPRIALFCEENPDVLACETVPCY-----DEAIAIARTLCDPLTTKGIP 219
Query: 502 MKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENI 560
D+ HISNGE+ + A + Q+ +G+NC P V LI+ +++ N
Sbjct: 220 AWISFSCKDEHHISNGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNK 277
Query: 561 PLVVYPNSGERYD 573
P+ VYPN GE YD
Sbjct: 278 PIAVYPNLGETYD 290
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 57/157 (36%), Gaps = 52/157 (33%)
Query: 287 EQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK---AWLSFSCKTE 342
E L+ +IP + ++ +LA ET+P EA + R L + K AW+SFSCK E
Sbjct: 170 EYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDE 229
Query: 343 ----------------------------------------------NIPLVVYPNSGERY 356
N P+ VYPN GE Y
Sbjct: 230 HHISNGETIIKCAEMIDKVRQVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPNLGETY 289
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D W + YV W G ++GGCCRT
Sbjct: 290 DGETKTWSGGQ--QSFIDYVDVWRKAGANIIGGCCRT 324
>gi|288905453|ref|YP_003430675.1| homocysteine S-methyltransferase [Streptococcus gallolyticus UCN34]
gi|386337898|ref|YP_006034067.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732179|emb|CBI13744.1| Putative homocysteine S-methyltransferase [Streptococcus
gallolyticus UCN34]
gi|334280534|dbj|BAK28108.1| homocysteine S-methyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 315
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 158/301 (52%), Gaps = 56/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + H ++++GADI+ T+SYQA++
Sbjct: 15 ILDGALGTELEKRGYDV--SGKLWSAKYLLENPSVIQDLHDVYLRSGADILTTSSYQATV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +F + K ++D I+L T AR ARD G L
Sbjct: 73 QGLKDFGLSE--------KEALDI----ISLTVTLAR-----QARDNFWNG--------L 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D ++ + Y LI+G +GPY A L DGSEY G+Y
Sbjct: 108 SDEAKKKRPYP-----------------------LISGDIGPYAAYLADGSEYNGNY--Q 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+++ +HRPRIQAL+ AG+D L IETIP EA+ L LL E+P +A++SF+ +D
Sbjct: 143 LTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQD 202
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPNSG 303
DKHIS+G +V C +P Q++A G+NC P ++S L+++++T + PLV YPNSG
Sbjct: 203 DKHISDGTPIEEVVALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNSG 260
Query: 304 E 304
E
Sbjct: 261 E 261
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
DDKHIS+G +V C +P Q++A G+NC P ++S L+++++T + PLV YPNS
Sbjct: 202 DDKHISDGTPIEEVVALC-EQSP-QILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEIYD 264
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 55/145 (37%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFS--------------------- 338
++G L IETIP EA+ L LL E+P +A++SF+
Sbjct: 161 SAGSDFLGIETIPNVAEAKALLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVVALCE 220
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWID-RDLCEPV 372
C + + PLV YPNSGE YD W D +
Sbjct: 221 QSPQILAFGINCSSPAVISGLLKRIRTVSPKPLVTYPNSGEIYDGATQTWKSIPDNSHTL 280
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT ED
Sbjct: 281 LENSRAWHQLGAKIVGGCCRTSPED 305
>gi|271964247|ref|YP_003338443.1| homocysteine methyltransferase [Streptosporangium roseum DSM 43021]
gi|270507422|gb|ACZ85700.1| homocysteine methyltransferase [Streptosporangium roseum DSM 43021]
Length = 287
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 143/299 (47%), Gaps = 68/299 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L D+ D LWS+ L + Q H D+ AGA++ T SYQASI
Sbjct: 3 ILDGGLATHLEALGADLRD--ELWSAKLLLENPSVIRQAHLDYFTAGAEVATTASYQASI 60
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F+ L + +LI SV EA T +A SVGPYGA L
Sbjct: 61 PAFVR-RGLSAREAEELIVLSVRLAAEARDSHGTGT------------VAASVGPYGAYL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+G+EY GDY + E +A+WHR
Sbjct: 108 ANGAEYTGDY--DLDEDGLADWHR------------------------------------ 129
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
WH L +GAD+LA ETIP+ EA+ L RLL E P +AW+SFSC+D
Sbjct: 130 ------DRWH-----ILAGSGADLLACETIPSYAEARALGRLLAETPGTRAWVSFSCRDG 178
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+HIS+G A + NP Q+IAVGVNC P ++SLI ++ E P++VYPNSGE
Sbjct: 179 EHISDGTPLKDAA-ALFAGNP-QVIAVGVNCTAPRHITSLIGRI--EGKPVMVYPNSGE 233
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 64/153 (41%), Gaps = 47/153 (30%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK----------------- 340
+ SG +LA ETIP+ EA+ L RLL E P +AW+SFSC+
Sbjct: 134 ILAGSGADLLACETIPSYAEARALGRLLAETPGTRAWVSFSCRDGEHISDGTPLKDAAAL 193
Query: 341 --------------------------TENIPLVVYPNSGERYDAVNARWIDRDLCEPVD- 373
E P++VYPNSGE +DA N RW+ L +P +
Sbjct: 194 FAGNPQVIAVGVNCTAPRHITSLIGRIEGKPVMVYPNSGETWDAANRRWL--GLADPAEF 251
Query: 374 -KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W G A VGGCCRT E + L
Sbjct: 252 GAAAAGWHAAGSAFVGGCCRTTPEHIRQIGEHL 284
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D +HIS+G A + NP Q+IAVGVNC P ++ LI ++ E P++VYPNSG
Sbjct: 177 DGEHISDGTPLKDAA-ALFAGNP-QVIAVGVNCTAPRHITSLIGRI--EGKPVMVYPNSG 232
Query: 570 ERYD 573
E +D
Sbjct: 233 ETWD 236
>gi|304437169|ref|ZP_07397130.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369831|gb|EFM23495.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 332
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 171/398 (42%), Gaps = 112/398 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG +++L + D PLWS+ L + V + H D+++AGAD++ + SYQ
Sbjct: 12 DVLVLDGALATELEARGFSVDD--PLWSAKALFERPNLVREIHLDYLRAGADVLTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM + + +L++ SV +EA RD+ A
Sbjct: 70 ATVAGFMR-RGFTAEKAAELLRRSVRLAQEA----------------RDLYRA------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
E GD A L+A SVGPYGA L DGSEYRGDY
Sbjct: 106 -------ECGGD---------------------AAVPLVAASVGPYGAYLADGSEYRGDY 137
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
V E T+ +H R++ L A D+LA ET+P EA + R LR E A+ SFS
Sbjct: 138 --DVEEDTLTAFHAQRLRILASAAPDLLACETLPCLHEACAIVRALRAEGIRIPAYFSFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYP 300
C+D HIS+G + AR + P+ A+GVNC P VS LI ++ E + P+VVYP
Sbjct: 196 CRDGAHISDGTEIAECARV-LDAVPEA-AAIGVNCTAPQYVSGLIRMIRQETDKPIVVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE+ YDA
Sbjct: 254 NSGEY--------------------------------------------------YDAAA 263
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDT 398
W R E ++ G ++GGCCRT DT
Sbjct: 264 RVW--RGAAEDFGARSREYAAAGARIIGGCCRTTPHDT 299
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + AR + P+ A+GVNC P VS LI ++ E + P+VVYPNS
Sbjct: 198 DGAHISDGTEIAECARV-LDAVPEA-AAIGVNCTAPQYVSGLIRMIRQETDKPIVVYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GEYYD 260
>gi|429735732|ref|ZP_19269663.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
gi|429157080|gb|EKX99687.1| homocysteine S-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
Length = 310
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 166/393 (42%), Gaps = 112/393 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F+++L + D LWS+ L D V H D+++AGA++V + SYQ
Sbjct: 12 DVIVLDGAFATELEARGFSVND--VLWSAKALFERPDLVRDVHLDYLRAGANVVTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM+ + L++ SV +EA RD+ +A
Sbjct: 70 ATVAGFMK-RGFSEAEAVALLQKSVHLAQEA----------------RDLYLA------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EH T +PA L+A SVGP+GA L DGSEYRGDY
Sbjct: 106 --------------EHG------------THEPAP--LVAASVGPFGAYLADGSEYRGDY 137
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
V E + E+H R++ L A D+LA ET+P EA+ L R LRE + AW SFS
Sbjct: 138 --DVDEDALTEFHAGRLRVLAAAQPDLLACETLPCLIEARALVRALREEKIRIPAWFSFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYP 300
C+D HIS+G + AR Y + A+G+NC P V LI + E P+VVYP
Sbjct: 196 CRDAAHISDGTEIAECAR--YLDGVPEAAAIGLNCTAPQYVEELIRTIHQETAKPVVVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA +
Sbjct: 254 NSGES--------------------------------------------------YDASD 263
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W E W G L+GGCCRT
Sbjct: 264 KTW--HGAAEDFGALARRWRSAGARLIGGCCRT 294
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D HIS+G + AR Y + A+G+NC P V LI + E P+VVYPNS
Sbjct: 198 DAAHISDGTEIAECAR--YLDGVPEAAAIGLNCTAPQYVEELIRTIHQETAKPVVVYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GESYD 260
>gi|401564628|ref|ZP_10805506.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC6]
gi|400188625|gb|EJO22776.1| homocysteine S-methyltransferase [Selenomonas sp. FOBRC6]
Length = 310
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 169/401 (42%), Gaps = 112/401 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F+++L + D LWS+ L D V H D+++AGAD+V + SYQ
Sbjct: 12 DVIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM+ + L++ SV +EA RD+ +A
Sbjct: 70 ATVEGFMK-RGFSEAEAAALLQKSVHLAQEA----------------RDLYLA------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RG T +PA L+A SVGPYGA L DGSEYRGDY
Sbjct: 106 --------ERG------------------THNPAP--LVAASVGPYGAYLADGSEYRGDY 137
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
V E + E+H R++ L A D+LA ET+P EA+ + R LR E AW SFS
Sbjct: 138 --DVDEDALTEFHAGRLRLLTAAQPDLLACETLPCLIEARAIVRALRAEKIRIPAWFSFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYP 300
C+D HIS+G + AR + + A+G+NC P V LI ++ E P++VYP
Sbjct: 196 CRDAAHISDGTEIAECAR--FLDGVPEAAAIGLNCTAPQYVEELIRTIRQETAKPIIVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA +
Sbjct: 254 NSGES--------------------------------------------------YDASD 263
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W E W G L+GGCCRT + + +
Sbjct: 264 KTW--HGAAEDFGALACRWRSAGARLIGGCCRTSPREIVEI 302
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D HIS+G + AR + + A+G+NC P V LI ++ E P++VYPNS
Sbjct: 198 DAAHISDGTEIAECAR--FLDGVPEAAAIGLNCTAPQYVEELIRTIRQETAKPIIVYPNS 255
Query: 569 GERYD 573
GE YD
Sbjct: 256 GESYD 260
>gi|238927222|ref|ZP_04658982.1| homocysteine S-methyltransferase [Selenomonas flueggei ATCC 43531]
gi|238885004|gb|EEQ48642.1| homocysteine S-methyltransferase [Selenomonas flueggei ATCC 43531]
Length = 349
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 167/398 (41%), Gaps = 112/398 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG +++L + D PLWS+ L D V H D+++AGAD++ + SYQ
Sbjct: 29 DVLVLDGALATELEARGFSVDD--PLWSAKALFERPDLVRDIHLDYLRAGADVLTSASYQ 86
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM+ + + +L++ SV +EA
Sbjct: 87 ATVDGFMQ-RGFTAEEAAELLRRSVRLAQEA----------------------------- 116
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RG Y S T L+A SVGPYGA L DGSEYRGDY
Sbjct: 117 ---------RGLYRAERSTGTAVP-------------LVAASVGPYGAYLADGSEYRGDY 154
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
V E + +H R++ L A D+LA ET+P EA + R LR E A+ SFS
Sbjct: 155 --DVEEDALTAFHAQRLRILASAAPDLLACETLPCLHEACAIVRSLRAEGIRIPAYFSFS 212
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYP 300
C+D HIS+G + AR + P+ A+GVNC P VS LI ++ E + P+VVYP
Sbjct: 213 CRDGAHISDGTEIAECARV-LDAVPEA-AAIGVNCTAPQYVSGLIRMIRQETDKPIVVYP 270
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE+ YDA
Sbjct: 271 NSGEY--------------------------------------------------YDAAA 280
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDT 398
W R E ++ G ++GGCCRT DT
Sbjct: 281 RVW--RGAAEDFGARSREYAAAGARIIGGCCRTTPHDT 316
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G + AR + P+ A+GVNC P VS LI ++ E + P+VVYPNS
Sbjct: 215 DGAHISDGTEIAECARV-LDAVPEA-AAIGVNCTAPQYVSGLIRMIRQETDKPIVVYPNS 272
Query: 569 GERYD 573
GE YD
Sbjct: 273 GEYYD 277
>gi|414877960|tpg|DAA55091.1| TPA: hypothetical protein ZEAMMB73_526479 [Zea mays]
Length = 302
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 60/304 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVQ-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + IL+A ++G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPILVAAALGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + +WLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKD 214
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H+ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGE 304
NSGE
Sbjct: 270 NSGE 273
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D H+ +G+S + +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
>gi|297559867|ref|YP_003678841.1| homocysteine S-methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844315|gb|ADH66335.1| homocysteine S-methyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 303
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 168/402 (41%), Gaps = 115/402 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L Y D+ G LWS+ LA D V + HRD+ +AGAD+ +
Sbjct: 12 VLDGGLATRLEAYGRDLGGG--LWSARLLAEEPDLVRRVHRDYFEAGADVAIAAG----- 64
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +S + + EA+AL A + + RD +G
Sbjct: 65 ----------YQASVPALTARGATESEALALIARSVELARAE--RDAFGSG--------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
L+A VGPYGA+ DGSEY GDY
Sbjct: 104 ----------------------------------LVAAGVGPYGAARADGSEYTGDY--D 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E + WHR R + L ++GAD+LA ET+P++ EA+ L RLL E P +AW+SFSC+D
Sbjct: 128 LDEEGLYAWHRERWRVLADSGADLLACETVPSAAEARALARLLAETPGARAWISFSCRDG 187
Query: 246 KHISNGESFTQVARTCYNMNPD-QLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ +S+G + A ++ D +L+AVGVNC P V +L+ + +P V YPNSGE
Sbjct: 188 ERVSDGTPLREAAAGLAPLHADGRLVAVGVNCTAPRHVPALVRAVAACGLPAVAYPNSGE 247
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
EW DA RW
Sbjct: 248 ----------------------EW----------------------------DAARGRWT 257
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
E + W + G LVGGCCRT E ++ LD
Sbjct: 258 GTAEPEEFGRAAVGWYEAGAVLVGGCCRTGPEHVRSVRAHLD 299
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 510 DDKHISNGESFTQVARTCYNMNPD-QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
D + +S+G + A ++ D +L+AVGVNC P V L+ + +P V YPNS
Sbjct: 186 DGERVSDGTPLREAAAGLAPLHADGRLVAVGVNCTAPRHVPALVRAVAACGLPAVAYPNS 245
Query: 569 GERYD 573
GE +D
Sbjct: 246 GEEWD 250
>gi|228946121|ref|ZP_04108456.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813534|gb|EEM59820.1| Homocysteine S-methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 236
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 62/261 (23%)
Query: 152 TDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILA 211
T+ P R L+ SVG YGA L DGSEY G+Y V++ T+A++HR R+ AL+EAGAD+LA
Sbjct: 25 TNRPKR--LVVASVGLYGAYLADGSEYVGNY--GVTDKTLADFHRSRMSALIEAGADLLA 80
Query: 212 IETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA 271
ETIP+ +EA++L LLRE+P AWLSFS K++K IS G + AR +Q++A
Sbjct: 81 FETIPSLQEARVLDTLLREFPETYAWLSFSLKNEKEISQGIKLVECARAF--EKSEQIVA 138
Query: 272 VGVNCVRPLMVSSLIEQLKTENI--PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWP 329
+G+NC +V+ I++L+ EN P++VYPNSGE
Sbjct: 139 IGINCAPVTVVTGAIQELR-ENTKKPIIVYPNSGE------------------------- 172
Query: 330 NQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGG 389
Y++ W D + C +D +W G L+GG
Sbjct: 173 -------------------------TYNSETKTWHDHEQCNSLDIQSEEWYQAGARLIGG 207
Query: 390 CCRTYAEDTLHMKHRLDDWVS 410
CCRT H++ + W S
Sbjct: 208 CCRT---TPYHIEEISNKWRS 225
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI--PLVVYPN 567
++K IS G + AR +Q++A+G+NC +V+ I++L+ EN P++VYPN
Sbjct: 113 NEKEISQGIKLVECARAF--EKSEQIVAIGINCAPVTVVTGAIQELR-ENTKKPIIVYPN 169
Query: 568 SGERYD 573
SGE Y+
Sbjct: 170 SGETYN 175
>gi|414877962|tpg|DAA55093.1| TPA: hypothetical protein ZEAMMB73_526479 [Zea mays]
Length = 295
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 60/304 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVQ-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + IL+A ++G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPILVAAALGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + +WLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKD 214
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H+ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGE 304
NSGE
Sbjct: 270 NSGE 273
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D H+ +G+S + +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
>gi|359395784|ref|ZP_09188836.1| Homocysteine S-methyltransferase ybgG [Halomonas boliviensis LC1]
gi|357970049|gb|EHJ92496.1| Homocysteine S-methyltransferase ybgG [Halomonas boliviensis LC1]
Length = 319
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 178/393 (45%), Gaps = 103/393 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG +++L D+ D LWS+ LA A + + Q H+ + +AGAD +T SYQA++
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM+ L + + LI+ SV ++A
Sbjct: 76 PGFMQ-AGLTAEEARALIQLSVTLAQQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD A W TD P LIA SVGPYGA L DGSEYRG Y
Sbjct: 103 RD-----------------AVWQPGQTDRP--KPLIAASVGPYGAYLADGSEYRGGY--D 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A + +HR R + L+ AGAD+LA ET+P+ +EA + LL E P +AW++FS KD
Sbjct: 142 LDRAGLVAFHRERFELLLAAGADLLAAETLPSLEEALAITDLLAEHPGAQAWITFSAKDG 201
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HIS+G + A N + A+GVNC + SLI++++ E ++P+VVYPNSGE
Sbjct: 202 QHISDGTPIAKCAAALANC--PGVAAIGVNCTALAHIESLIKEIRRECDLPIVVYPNSGE 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W S +C L SG
Sbjct: 260 VYD---------------------PVTKTWHSATCDHTAADL-----SG----------- 282
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + V WL G + GGCCRT ED
Sbjct: 283 -------LAQGVEHWLAAGASGFGGCCRTSPED 308
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HIS+G + A N + A+GVNC + LI++++ E ++P+VVYPNS
Sbjct: 200 DGQHISDGTPIAKCAAALANC--PGVAAIGVNCTALAHIESLIKEIRRECDLPIVVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GEVYD 262
>gi|328725536|ref|XP_003248519.1| PREDICTED: homocysteine S-methyltransferase-like [Acyrthosiphon
pisum]
Length = 328
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 156/352 (44%), Gaps = 110/352 (31%)
Query: 48 FIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDD 107
AGA++ +T SYQA+ GF LD + LI SV + A
Sbjct: 74 LFAAGANVAITASYQATPQGFAA-RGLDEAQALTLIDQSVKLAQRA-------------- 118
Query: 108 PARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGP 167
RD A S GSE +L+AGSVGP
Sbjct: 119 --RDDYRAAS----------GSE--------------------------AALLVAGSVGP 140
Query: 168 YGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRL 227
YGA L +G+EYRGDY + EA M ++HRPR++AL++AG D+LA ET+P+ EAQ L L
Sbjct: 141 YGAYLANGAEYRGDYA--LPEAEMKDFHRPRVKALLDAGVDLLACETLPSFAEAQALVSL 198
Query: 228 LREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
L E+P+ AW SF+ D +HIS+G +QVA N P Q++A+G+NCV V+ ++
Sbjct: 199 LAEYPNSSAWFSFTLCDAQHISDGTPLSQVAELV-NAAP-QVVAMGINCVALESVTPALQ 256
Query: 288 QLKTENI-PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
L+ PL+VYPNSGE
Sbjct: 257 TLQALCAKPLLVYPNSGE------------------------------------------ 274
Query: 347 VVYPNSGERYDAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+YDA + W C DK+ +W G L+GGCCRT +D
Sbjct: 275 --------QYDASSKTWHSAPSGCTLQDKF-PEWQQAGARLIGGCCRTTPQD 317
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +HIS+G +QVA N P Q++A+G+NCV V+P ++ L+ PL+VYPNS
Sbjct: 215 DAQHISDGTPLSQVAELV-NAAP-QVVAMGINCVALESVTPALQTLQALCAKPLLVYPNS 272
Query: 569 GERYD 573
GE+YD
Sbjct: 273 GEQYD 277
>gi|162463923|ref|NP_001105011.1| homocysteine S-methyltransferase 1 [Zea mays]
gi|50400645|sp|Q9FUN0.1|HMT1_MAIZE RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=SMM:Hcy S-methyltransferase 1; AltName:
Full=ZmHMT-1
gi|10732785|gb|AAG22537.1|AF297044_1 homocysteine S-methyltransferase-1 [Zea mays]
gi|194696762|gb|ACF82465.1| unknown [Zea mays]
gi|194697002|gb|ACF82585.1| unknown [Zea mays]
gi|195647426|gb|ACG43181.1| homocysteine S-methyltransferase 1 [Zea mays]
Length = 323
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 106/392 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T V + H +++AGAD+++++SYQA+I
Sbjct: 16 VIDGGFATQLEALGADIND--PLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATI 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ AR S A D+L S+
Sbjct: 74 PGFI-------------------------------ARGMSVAEAEDLL--------RTSV 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ +E R ++ + + ++R L+A S+G YGA L DGSEY G Y
Sbjct: 95 KLANEARDEFWKSTLRKSKPIYNR---------ALVAASIGSYGAYLADGSEYSGSYGAD 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 146 ITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEEEKVQIPSWICFSSVD 205
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRPLMVSSLI-EQLKTENIPLVVYPNS 302
K++ +GESF + +N + +A VGVNC P + +I E K + VYPNS
Sbjct: 206 GKNLCSGESFADCLKI---LNASEKVAVVGVNCTPPQFIEGIICEFRKQTKKAIAVYPNS 262
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W + K WL C + +DA+
Sbjct: 263 GEV----------------------WDGRAKRWLPVECLGH-----------KSFDALAK 289
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R W + G +L+GGCCRT
Sbjct: 290 R----------------WQEAGASLIGGCCRT 305
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAV-GVNCVRPLMVSPLI-EQLKTENIPLVVYPN 567
D K++ +GESF + +N + +AV GVNC P + +I E K + VYPN
Sbjct: 205 DGKNLCSGESFADCLKI---LNASEKVAVVGVNCTPPQFIEGIICEFRKQTKKAIAVYPN 261
Query: 568 SGERYD 573
SGE +D
Sbjct: 262 SGEVWD 267
>gi|427796533|gb|JAA63718.1| Putative cysteine s-methyltransferase, partial [Rhipicephalus
pulchellus]
Length = 257
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 130/267 (48%), Gaps = 68/267 (25%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPAS 218
+L+AGSVGPYGA+ D SEY G Y S + EWHRPR++ L+ AG D+LA ETIPA
Sbjct: 52 VLVAGSVGPYGAAQADLSEYTGAYAAVKSVEELVEWHRPRVRCLIAAGCDVLAFETIPAE 111
Query: 219 KEAQMLCRLLREWPHQKAWLSFSC-KDDKHIS-NGESFTQVARTCYNMNPD-QLIAVGVN 275
+EA L RLLRE+P +AWLSFS +D H + GE +V C + + Q+ A+GVN
Sbjct: 112 REALALVRLLREFPDARAWLSFSTSRDAPHCTAKGEPLAEVMNECLLADVNGQIFAIGVN 171
Query: 276 CVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
C P V++ + +P V YPNSGE
Sbjct: 172 CCPPQSVAAAFRSIGPLRVPFVTYPNSGE------------------------------- 200
Query: 336 SFSCKTENIPLVVYPNSGERYDAVNARWI--DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+Y +SG W+ DR +P+ YV +W+D V +GGCCRT
Sbjct: 201 ------------MYTSSG---------WVPDDRLTRKPLAAYVPEWIDLNVRWIGGCCRT 239
Query: 394 YAEDTLHMKHRLDDWVSGLSTYVGDII 420
+D +SG++ V +II
Sbjct: 240 GTDD-----------ISGVARAVSNII 255
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 515 SNGESFTQVARTCYNMNPD-QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERY 572
+ GE +V C + + Q+ A+GVNC P V+ + +P V YPNSGE Y
Sbjct: 144 AKGEPLAEVMNECLLADVNGQIFAIGVNCCPPQSVAAAFRSIGPLRVPFVTYPNSGEMY 202
>gi|255581651|ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
gi|223528747|gb|EEF30757.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ricinus communis]
Length = 327
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 176/392 (44%), Gaps = 106/392 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL T+ I D PLWS+ L + + + H ++++AGADI++T+SYQA++
Sbjct: 22 VIDGGFATQLETHGAAIND--PLWSALCLIKDPELIKRVHLEYLEAGADILVTSSYQATL 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM L + L+K SV +A+EA
Sbjct: 80 PGFMS-KGLTIEEGELLLKKSVK-----LAIEA--------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + V + ++R L+A S+G YGA L DGSEY G Y
Sbjct: 107 ------RDKFWDAVKRNPLHRYNR---------ALVAASIGSYGAYLADGSEYSGYYGPD 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ + ++HR R+Q L EAG D+LA ETIP EA+ LL E + +W+ FS D
Sbjct: 152 VNLEKLKDFHRHRLQVLAEAGPDLLAFETIPNKLEAEACVELLEEENIKIPSWICFSSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYPNS 302
++ +GESF + N +++A G+NC P + SLI + K T+ +VVYPNS
Sbjct: 212 GENAPSGESFQECLDVINKSN--KVVAAGINCAPPHFIESLICKFKKLTQKF-VVVYPNS 268
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W + K WL +C ++
Sbjct: 269 GEI----------------------WDGRAKRWLPSACFNDD------------------ 288
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + T W D G L+GGCCRT
Sbjct: 289 ---------KFEFFATRWHDLGANLIGGCCRT 311
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPN 567
D ++ +GESF + N +++A G+NC P + LI + K T+ +VVYPN
Sbjct: 211 DGENAPSGESFQECLDVINKSN--KVVAAGINCAPPHFIESLICKFKKLTQKF-VVVYPN 267
Query: 568 SGERYD 573
SGE +D
Sbjct: 268 SGEIWD 273
>gi|222150580|ref|YP_002559733.1| homocysteine methyltransferase [Macrococcus caseolyticus JCSC5402]
gi|222119702|dbj|BAH17037.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 295
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 163/338 (48%), Gaps = 69/338 (20%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ ++DGGF + + + D+ H LWSS + + +AV + H+ F+ +GA+I++TN+YQ
Sbjct: 10 DIVILDGGFGTTVEQFGYDV--KHELWSSNLIQSNPEAVYKVHKAFVDSGAEIILTNTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ FL++ D + ++ Y+ A+ L
Sbjct: 68 ASV---QSFLNIGIDKA-----TACTYLATAVEL-------------------------- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
AT A +R I IAGS+GPYGA L +GSEY GDY
Sbjct: 94 -------------------ATRAASNRTI---------IAGSLGPYGAMLGNGSEYTGDY 125
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
E +EA ++H+ R+ L+EAG + A ETIP +E + + LL ++PH +AW+S +
Sbjct: 126 EE--TEADYIQYHKERLDILIEAGVSVFAFETIPNIEEIKAVRTLLLDYPHIEAWISVTL 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+G V + + ++A GVNC ++ + +++L T + PL++YPN
Sbjct: 184 KDHDHLSDGTPLEAVIEVVNEI--ENVLAFGVNCTSVNVIDAAVDKLITLSDKPLILYPN 241
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
SG A+ + +E L W + + C
Sbjct: 242 SGRQYDAVHKVWIDQEDASLVEAAPRWKEKGVKIIGGC 279
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 47/137 (34%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK--------------------T 341
+G + A ETIP +E + + LL ++P+ +AW+S + K
Sbjct: 146 AGVSVFAFETIPNIEEIKAVRTLLLDYPHIEAWISVTLKDHDHLSDGTPLEAVIEVVNEI 205
Query: 342 ENI--------------------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKY 375
EN+ PL++YPNSG +YDAV+ WID++ V+
Sbjct: 206 ENVLAFGVNCTSVNVIDAAVDKLITLSDKPLILYPNSGRQYDAVHKVWIDQEDASLVEA- 264
Query: 376 VTDWLDEGVALVGGCCR 392
W ++GV ++GGCC+
Sbjct: 265 APRWKEKGVKIIGGCCQ 281
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+G V + + ++A GVNC ++ +++L T + PL++YPNS
Sbjct: 185 DHDHLSDGTPLEAVIEVVNEI--ENVLAFGVNCTSVNVIDAAVDKLITLSDKPLILYPNS 242
Query: 569 GERYD 573
G +YD
Sbjct: 243 GRQYD 247
>gi|303231518|ref|ZP_07318247.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513764|gb|EFL55777.1| putative Homocysteine S-methyltransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 339
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 174/392 (44%), Gaps = 89/392 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG F ++L + +I D LWSS L + + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L+K SV +A++A + + + A D L + G L
Sbjct: 76 AGFKAH-GYGTEEALDLVKLSVR-----LAVQARNEFLEAK--ANDALTLRGI-TLGEQL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGS V + SE + + L+A SVGPYGA L DGSEYRGDY
Sbjct: 127 PDGS------VRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRGDY--G 166
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PRI E D+LA ET+P EA + R L + K AW+SFSC
Sbjct: 167 VQTEYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARALCDPLTTKGIPAWISFSC 226
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD+ HIS+GE+ + A + Q+ +G+NC P V SLI+ +++ N P+ VYPN
Sbjct: 227 KDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPN 284
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE Y + +
Sbjct: 285 LGE-------------------------------------------TYDGEAKTWSGGQQ 301
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ID YV W G ++GGCCRT
Sbjct: 302 SFID---------YVDVWRKAGANIIGGCCRT 324
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 448 GSQTNDFLRDYNSPNLWI------DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 501
G QT ++L ++ P + + D CE V Y DE +A+ C +
Sbjct: 166 GVQT-EYLEVFHIPRIALFCEENPDVLACETVPCY-----DEAIAIARALCDPLTTKGIP 219
Query: 502 MKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENI 560
D+ HIS+GE+ + A + Q+ +G+NC P V LI+ +++ N
Sbjct: 220 AWISFSCKDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNK 277
Query: 561 PLVVYPNSGERYD 573
P+ VYPN GE YD
Sbjct: 278 PIAVYPNLGETYD 290
>gi|448747347|ref|ZP_21729007.1| Homocysteine S-methyltransferase [Halomonas titanicae BH1]
gi|445565039|gb|ELY21152.1| Homocysteine S-methyltransferase [Halomonas titanicae BH1]
Length = 322
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 178/393 (45%), Gaps = 103/393 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG +++L D+ D LWS+ LA A + + Q H+ + +AGAD +T SYQA++
Sbjct: 18 VIDGALATELEALGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GFM+ L + + LI+ SV ++A
Sbjct: 76 PGFMQ-AGLTAEEARALIQLSVTLAQQA-------------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD A W TD P L+A SVGPYGA L DGSEYRG Y
Sbjct: 103 RD-----------------AVWQPGQTDRP--KPLVAASVGPYGAYLADGSEYRGGY--D 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A + E+HR R + L+ AGAD+LA ET+P+ +EA + LL E P +AW++FS KD
Sbjct: 142 LDRAGLVEFHRERFELLLAAGADLLAAETLPSLEEALAITDLLAEHPGAQAWITFSAKDG 201
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
+HIS+G Q A N + A+GVNC + SLI+ ++ + ++P++VYPNSGE
Sbjct: 202 QHISDGTPIEQCAAALANC--PGVAAIGVNCTALAHIESLIQAIRRQCDLPILVYPNSGE 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
A+ K W C + SG
Sbjct: 260 VYDAVT---------------------KTWHPAQCDHTAADI-----SG----------- 282
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + V WL G + +GGCCRT ED
Sbjct: 283 -------LAQGVEQWLAAGASGIGGCCRTTPED 308
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +HIS+G Q A N + A+GVNC + LI+ ++ + ++P++VYPNS
Sbjct: 200 DGQHISDGTPIEQCAAALANC--PGVAAIGVNCTALAHIESLIQAIRRQCDLPILVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GEVYD 262
>gi|401680632|ref|ZP_10812545.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
gi|400218368|gb|EJO49250.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
Length = 339
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 156/303 (51%), Gaps = 37/303 (12%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG F ++L + +I D LWSS L + + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L+K SV +A++A + + + A D L + G L
Sbjct: 76 AGFKAH-GYGTEEALDLVKLSVR-----LAVQARNEFLEAK--ANDALTLRGI-TLGEQL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGS V + SE + + L+A SVGPYGA L DGSEYRGDY
Sbjct: 127 PDGS------VRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRGDY--G 166
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PRI E D+LA ET+P EA + R L + K AW+SFSC
Sbjct: 167 VQTEYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSC 226
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD+ HIS+GE+ + A + Q+ +G+NC P V SLI+ +++ N P+ VYPN
Sbjct: 227 KDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPN 284
Query: 302 SGE 304
GE
Sbjct: 285 LGE 287
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 448 GSQTNDFLRDYNSPNLWI------DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 501
G QT ++L ++ P + + D CE V Y DE +A+ C +
Sbjct: 166 GVQT-EYLEVFHIPRIALFCEENPDVLACETVPCY-----DEAIAIARTLCDPLTTKGIP 219
Query: 502 MKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENI 560
D+ HIS+GE+ + A + Q+ +G+NC P V LI+ +++ N
Sbjct: 220 AWISFSCKDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNK 277
Query: 561 PLVVYPNSGERYD 573
P+ VYPN GE YD
Sbjct: 278 PIAVYPNLGETYD 290
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 57/157 (36%), Gaps = 52/157 (33%)
Query: 287 EQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK---AWLSFSCKTE 342
E L+ +IP + ++ +LA ET+P EA + R L + K AW+SFSCK E
Sbjct: 170 EYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDE 229
Query: 343 ----------------------------------------------NIPLVVYPNSGERY 356
N P+ VYPN GE Y
Sbjct: 230 HHISSGETIIKCAEMIDKVRQVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPNLGETY 289
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D W + YV W G ++GGCCRT
Sbjct: 290 DGETKTWSGGQ--QSFIDYVDVWRKAGANIIGGCCRT 324
>gi|429759196|ref|ZP_19291700.1| homocysteine S-methyltransferase [Veillonella atypica KON]
gi|429180404|gb|EKY21625.1| homocysteine S-methyltransferase [Veillonella atypica KON]
Length = 339
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 156/303 (51%), Gaps = 37/303 (12%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG F ++L + +I D LWSS L + + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGAFGTELERHGCNIHD--ELWSSKMLIENPEIIKKVHISYLAAGADIIESSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L+K SV +A++A + + + A D L + G L
Sbjct: 76 AGFKAH-GYGTEEALDLVKLSVR-----LAVQARNEFLEAK--ANDALTLRGI-TLGEQL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGS V + SE + + L+A SVGPYGA L DGSEYRGDY
Sbjct: 127 PDGS------VRYFSEGALPKP------------LVAASVGPYGAFLADGSEYRGDY--G 166
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PRI E D+LA ET+P EA + R L + K AW+SFSC
Sbjct: 167 VQTEYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSC 226
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD+ HIS+GE+ + A + Q+ +G+NC P V SLI+ +++ N P+ VYPN
Sbjct: 227 KDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPN 284
Query: 302 SGE 304
GE
Sbjct: 285 LGE 287
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 448 GSQTNDFLRDYNSPNLWI------DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 501
G QT ++L ++ P + + D CE V Y DE +A+ C +
Sbjct: 166 GVQT-EYLEVFHIPRIALFCEENPDVLACETVPCY-----DEAIAIARTLCDPLTTKGIP 219
Query: 502 MKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENI 560
D+ HIS+GE+ + A + Q+ +G+NC P V LI+ +++ N
Sbjct: 220 AWISFSCKDEHHISSGETIIKCAEMIDKVR--QVTGIGINCTAPEYVESLIKDIRSVTNK 277
Query: 561 PLVVYPNSGERYD 573
P+ VYPN GE YD
Sbjct: 278 PIAVYPNLGETYD 290
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 52/157 (33%)
Query: 287 EQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK---AWLSFSCKTE 342
E L+ +IP + ++ +LA ET+P EA + R L + K AW+SFSCK E
Sbjct: 170 EYLEVFHIPRIALFCEENPDVLACETVPCYDEAIAIARTLCDPLTTKGIPAWISFSCKDE 229
Query: 343 ----------------------------------------------NIPLVVYPNSGERY 356
N P+ VYPN GE Y
Sbjct: 230 HHISSGETIIKCAEMIDKVRQVTGIGINCTAPEYVESLIKDIRSVTNKPIAVYPNLGETY 289
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
D W + Y+ W G ++GGCCRT
Sbjct: 290 DGETKTWSGGQ--QSFIDYIDVWRKAGANIIGGCCRT 324
>gi|220911917|ref|YP_002487226.1| homocysteine methyltransferase [Arthrobacter chlorophenolicus A6]
gi|219858795|gb|ACL39137.1| homocysteine S-methyltransferase [Arthrobacter chlorophenolicus A6]
Length = 319
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 147/300 (49%), Gaps = 61/300 (20%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DG +++L ++ D PLWS+ L + HRD+ AGA I T SYQA+
Sbjct: 24 VTDGALATELEDRGCNLDD--PLWSAKVLLEHPGLIRDVHRDYFAAGARIATTASYQATP 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF AR ++ A D++ S+
Sbjct: 82 QGFA-------------------------------ARGMTEQEALDLV--------ALSV 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R E R D++ + SEA R + IAGSVGPYGA L DGSEYRGDY
Sbjct: 103 RLADEARRDHLANQSEA--------------RPLFIAGSVGPYGAYLADGSEYRGDYA-- 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++ A ++HRPR++ALVE+GAD LA ET+P+ EA+ L L R+ ++W SFS +D
Sbjct: 147 LTPAEFRDFHRPRLEALVESGADALACETLPSFAEARALAELTRDL-GVESWFSFSLRDA 205
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGE 304
HIS+G VA + + AVGVNCV +V+ + L+ PLV YPNSGE
Sbjct: 206 GHISDGTPLAAVAELLDGES--HVAAVGVNCVPLALVAPALTALRGGTGKPLVAYPNSGE 263
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D HIS+G VA + + AVGVNCV +V+P + L+ PLV YPNS
Sbjct: 204 DAGHISDGTPLAAVAELLDGES--HVAAVGVNCVPLALVAPALTALRGGTGKPLVAYPNS 261
Query: 569 GERYD 573
GE YD
Sbjct: 262 GETYD 266
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 49/146 (33%), Gaps = 50/146 (34%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------------------- 340
SG LA ET+P+ EA+ L L R+ ++W SFS +
Sbjct: 165 ESGADALACETLPSFAEARALAELTRDL-GVESWFSFSLRDAGHISDGTPLAAVAELLDG 223
Query: 341 --------------------------TENIPLVVYPNSGERYDAVNARW---IDRDLCEP 371
PLV YPNSGE YDA W
Sbjct: 224 ESHVAAVGVNCVPLALVAPALTALRGGTGKPLVAYPNSGETYDAGTKTWDAAPAATAPAA 283
Query: 372 VDKYVTDWLDEGVALVGGCCRTYAED 397
+ V W G ++GGCCRT D
Sbjct: 284 LADGVPAWQALGARIIGGCCRTTPAD 309
>gi|42572773|ref|NP_974482.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
gi|332646934|gb|AEE80455.1| homocysteine S-methyltransferase 2 [Arabidopsis thaliana]
Length = 293
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 168/390 (43%), Gaps = 109/390 (27%)
Query: 22 IIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQ 81
+ID L YFL + Q H D+++AGADI+ + SYQA+I GF E + S
Sbjct: 1 MIDCSLLSCLYFL------MEQVHLDYLEAGADIISSASYQATIQGF-EAKGFSREESES 53
Query: 82 LIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 141
L+K SV+ EA R Y +
Sbjct: 54 LLKKSVEIATEA--------------------------------------RNSYYDKCGT 75
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA 201
++ + L R IL+A SVG YGA L DGSEY G Y + ++ + ++HR R+Q
Sbjct: 76 SSSMDDKIL----KKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQV 131
Query: 202 LVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQVART 260
L E+GAD++A ETIP EAQ LL E + W SF+ KD ++ +G+S +
Sbjct: 132 LAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSI----KE 187
Query: 261 CYNM--NPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGEHILAIETIPASKE 317
C ++ N ++++AVG+NC P + L+ ++ K + P++VYPNSGE
Sbjct: 188 CISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGES------------ 235
Query: 318 AQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLC--EPVDKY 375
YDA W++ E Y
Sbjct: 236 --------------------------------------YDADRKEWVENTGVGDEDFVSY 257
Query: 376 VTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
V W+D GV+L+GGCCRT + RL
Sbjct: 258 VEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 287
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYDFHLADEK 580
N ++++AVG+NC P + L+ ++ K + P++VYPNSGE YD AD K
Sbjct: 194 NCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYD---ADRK 241
>gi|334185631|ref|NP_001189977.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|332643567|gb|AEE77088.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 306
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 168/390 (43%), Gaps = 122/390 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGADIV+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV+ EA
Sbjct: 80 PGFLS-RGLSIEESESLLQKSVELAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + E VS+ + ++R L+A S+G YGA L DGSEY G Y E+
Sbjct: 107 ------RDRFWEKVSKVSGHSYNR---------ALVAASIGSYGAYLADGSEYSGHYGEN 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ +GESF + C+ PL S+ I L + I VVYPNSGE
Sbjct: 212 GEKAPSGESFEE-------------------CLEPLNKSNNIYALTKKAI--VVYPNSGE 250
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
W + K WL C ++
Sbjct: 251 V----------------------WDGKAKQWLPSQCFGDD-------------------- 268
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + T W D G L+GGCCRT
Sbjct: 269 -------EFEMFATKWRDLGAKLIGGCCRT 291
>gi|321461515|gb|EFX72546.1| hypothetical protein DAPPUDRAFT_308201 [Daphnia pulex]
Length = 325
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 64/338 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLAT-----AKDAVVQTHRDFIKAGADIVMTNS 60
++DGG + L G + G PLWS L + + ++Q H D++ AGADI+ TN
Sbjct: 7 ILDGGLGTLLYRR-GAFVKGDPLWSVRCLVSKEQLEGRRQLLQAHLDYLAAGADIIKTN- 64
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
SYQ+ S + +++ +
Sbjct: 65 ------------------SYQM---STENLRKCLP------------------------- 78
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR-DILIAGSVGPYGASLRDGSEYR 179
G S E D V A W + + R +AGS+GPYGA D SEY
Sbjct: 79 -GLSQEKALEMMKDSVRIARNACQQFWQSIGEEKSGRRKPGVAGSIGPYGACKADMSEYT 137
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWL 238
G YV+ ++E + +WHRPR+ AL+EAG D LAIET PA EA+ + +LL+ E P AW+
Sbjct: 138 GAYVDSMTEEELIQWHRPRLVALLEAGVDYLAIETFPALLEAKAILQLLKQEAPDIPAWI 197
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLV 297
SFSCKD++H+ +GE+ V + + L A+G+NC ++ L+ L +++P++
Sbjct: 198 SFSCKDEQHLCHGETLDSVLKHVWVNKTPGLKAIGINCTPERLIGPLLRSLDGVDHVPVI 257
Query: 298 VYPN-------SGEHILAIETIPASKEAQMLCRLLREW 328
+YPN G + A + K L +L +EW
Sbjct: 258 LYPNREESFEDEGPPVAAYPSRQDEKCNNNLSKLAKEW 295
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D++H+ +GE+ V + + L A+G+NC ++ PL+ L +++P+++YPN
Sbjct: 203 DEQHLCHGETLDSVLKHVWVNKTPGLKAIGINCTPERLIGPLLRSLDGVDHVPVILYPNR 262
Query: 569 GERYD 573
E ++
Sbjct: 263 EESFE 267
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCKTEN 343
LV +G LAIET PA EA+ + +LL+ E P+ AW+SFSCK E
Sbjct: 157 LVALLEAGVDYLAIETFPALLEAKAILQLLKQEAPDIPAWISFSCKDEQ 205
>gi|269797423|ref|YP_003311323.1| homocysteine S-methyltransferase [Veillonella parvula DSM 2008]
gi|269094052|gb|ACZ24043.1| homocysteine S-methyltransferase [Veillonella parvula DSM 2008]
Length = 341
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 179/395 (45%), Gaps = 90/395 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y DI H LWS+ L D + + H ++ AGADI+ ++ YQA++
Sbjct: 22 VLDGALGTELERYGCDI--QHKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A++A + + + +G++ G L
Sbjct: 80 AGF-KGLGYGTEEAIELVKLSVR-----LAVQARNEFLEAK-------ASGALTLRGIKL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E + V++ SE + + L+A SVGPYGA L DGSEYRG
Sbjct: 127 ---GEETPEGVKYFSEGALPK------------PLVAASVGPYGAFLADGSEYRG--YPD 169
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PR+ E DIL+ ETIP+ EA + R + + K AW++FSC
Sbjct: 170 VQTEYLEVFHIPRLALFCEENPDILSFETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSC 229
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+GE+ + A+ ++P + +G+NC +P V SLI+ ++T + P+ VYPN
Sbjct: 230 KDGHHVSSGETIIKCAQMIDKVHP--ITGIGINCTKPEYVESLIKDIRTVTDKPIAVYPN 287
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE YD+
Sbjct: 288 LGE--------------------------------------------------SYDSKTK 297
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W G ++GGCCRT E
Sbjct: 298 TWYG-DAASFVD-YVEVWRKAGAEIIGGCCRTTPE 330
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A+ ++P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 231 DGHHVSSGETIIKCAQMIDKVHP--ITGIGINCTKPEYVESLIKDIRTVTDKPIAVYPNL 288
Query: 569 GERYD 573
GE YD
Sbjct: 289 GESYD 293
>gi|389578437|ref|ZP_10168464.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Desulfobacter postgatei
2ac9]
gi|389400072|gb|EIM62294.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Desulfobacter postgatei
2ac9]
Length = 312
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 166/397 (41%), Gaps = 107/397 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG ++L ++ D PLWS+ LA D + H D++ AGAD ++T SYQA+
Sbjct: 16 IIDGGLGTELERRGCNLDD--PLWSARLLADNPDMIAAVHSDYLHAGADCLITASYQATF 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + LI+S+V K +
Sbjct: 74 QGLAR-RGYTPEQVKNLIRSAVTLAKNIV------------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ D V V +RL L+A SVGPYGA L D SEY G Y
Sbjct: 102 ---DAFWADPVNRV--------NRL-------KPLVAASVGPYGAFLADRSEYTGKY--S 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + ++H+ R++ LV AG D+LA ET+P EA+ L RLL + AW SFS +D
Sbjct: 142 ISEDELVDFHKERLKILVSAGPDLLACETLPCFAEARALVRLLEDLDAPPAWFSFSARDG 201
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+HIS+GE+ A+ + + A+G+NC PL V+SL+ ++++ P+VVYPN G
Sbjct: 202 QHISSGEALRDCAQ--WLDGKPCVAAIGINCTDPLHVASLVREIRSMTEKPVVVYPNKGR 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
Y+++ W
Sbjct: 260 V--------------------------------------------------YNSLTNAWT 269
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ + W +G L+GGCCRT ED +
Sbjct: 270 PKSDLPSFGEMAVQWAKDGARLIGGCCRTTPEDIRQL 306
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +HIS+GE+ A+ + + A+G+NC PL V+ L+ ++++ P+VVYPN
Sbjct: 200 DGQHISSGEALRDCAQ--WLDGKPCVAAIGINCTDPLHVASLVREIRSMTEKPVVVYPNK 257
Query: 569 GERYD 573
G Y+
Sbjct: 258 GRVYN 262
>gi|238020029|ref|ZP_04600455.1| hypothetical protein VEIDISOL_01905 [Veillonella dispar ATCC 17748]
gi|237863553|gb|EEP64843.1| hypothetical protein VEIDISOL_01905 [Veillonella dispar ATCC 17748]
Length = 341
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 179/396 (45%), Gaps = 92/396 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+L Y ++ H LWS+ L D + + H ++ AGADI+ ++ YQA++
Sbjct: 22 VLDGGLGSELERYGCNL--QHKLWSAKILMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A++A + + + +G++ G +L
Sbjct: 80 AGF-KGLGYGTEEAIELVKLSVR-----LAVQARNEFVEAK-------ASGALTLRGITL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E D V + SE + + L+A SVGPYGA L DGSEYRG
Sbjct: 127 ---GEETPDGVRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRG--YPD 169
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK----AWLSFS 241
V + +H PR+ E DIL+ ETIP+ EA + R + + P+ W++FS
Sbjct: 170 VQTEYLEIFHIPRLALFCEENPDILSFETIPSYDEAIAIARAMSD-PYTSRGIPGWIAFS 228
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYP 300
CKD H+S+GE+ + A + P + +GVNC +P V SLI+ ++T + P+ VYP
Sbjct: 229 CKDGHHVSSGETIIKCAEMIDKVRP--ITGIGVNCTKPEYVESLIKDIRTVTDKPIAVYP 286
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N GE YD+
Sbjct: 287 NLGES--------------------------------------------------YDSET 296
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W + G ++GGCCRT E
Sbjct: 297 KTWYG-DPASFVD-YVDVWRNAGADIIGGCCRTTPE 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A + P + +GVNC +P V LI+ ++T + P+ VYPN
Sbjct: 231 DGHHVSSGETIIKCAEMIDKVRP--ITGIGVNCTKPEYVESLIKDIRTVTDKPIAVYPNL 288
Query: 569 GERYD 573
GE YD
Sbjct: 289 GESYD 293
>gi|372477767|gb|AEX97078.1| homocysteine s-methytransferase, partial [Malus x domestica]
Length = 324
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 162/393 (41%), Gaps = 108/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L D + + H D++ AGADI++T+SYQA+I
Sbjct: 23 VVDGGFATQLERHGAAIND--PLWSAVCLINQPDLIKRVHLDYLDAGADILITSSYQATI 80
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ G S+
Sbjct: 81 PGFLS--------------------------------------------------RGLSI 90
Query: 126 RDGSEYRGDYVEHVSEATMAEWH--RLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
G V+ EA + W ++ D L+A S+G YGA L DGSEY G Y
Sbjct: 91 EQGELLLKKSVKLAVEARNSFWDALKVTPDHRYNRALVAASIGSYGAYLADGSEYSGCYG 150
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
V + ++HR R Q LVEAG D+LA ET P EAQ LL E Q +W+ FS
Sbjct: 151 PRVDVDKLKDFHRRRFQVLVEAGPDLLAFETFPNKLEAQACLELLEEQSVQIPSWICFSS 210
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPN 301
D ++ +GE FT+ N ++ AVG+NC P ++ SLI + K + ++VYPN
Sbjct: 211 VDGENAPSGEGFTECLEVINKSN--KIHAVGINCTPPHLIKSLICKFKDLTSKAIIVYPN 268
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W + K WL C E
Sbjct: 269 SGEI----------------------WDGKAKRWLPAKCFDE------------------ 288
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
E + + T W D G +G CCRT
Sbjct: 289 ---------ENFECFATIWRDSGAKHIGRCCRT 312
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D ++ +GE FT+ N ++ AVG+NC P ++ LI + K + ++VYPNS
Sbjct: 212 DGENAPSGEGFTECLEVINKSN--KIHAVGINCTPPHLIKSLICKFKDLTSKAIIVYPNS 269
Query: 569 GERYD 573
GE +D
Sbjct: 270 GEIWD 274
>gi|418018246|ref|ZP_12657802.1| homocysteine methyltransferase [Streptococcus salivarius M18]
gi|345527095|gb|EGX30406.1| homocysteine methyltransferase [Streptococcus salivarius M18]
Length = 316
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 167/329 (50%), Gaps = 56/329 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ + DI LWS+ +L + + + H ++ AGAD++ T+SYQA++
Sbjct: 15 ILHGALGTEMESLGYDI--SGKLWSAKYLLEKPEVIQKIHETYVAAGADLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + Q+I +V K+A RD + A +L
Sbjct: 73 PGLID-AGLTKEEAEQIITLTVQLAKDA----------------RDKVWA--------TL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D + Y LI+G VGPY A L +GSEY GDY +
Sbjct: 108 DDSEKANRPYP-----------------------LISGDVGPYAAYLANGSEYTGDYGQI 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
EA + E+HRPRIQ L++ G D+LA+ETIP EAQ+L LL E+P +A++SF+ ++
Sbjct: 145 TIEA-LKEFHRPRIQILLDQGVDLLALETIPNHLEAQVLIELLAEEFPEAEAYISFTVQE 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNSGE
Sbjct: 204 PGTISDGTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGE 261
Query: 305 -HILAIET-IPASKEAQMLCRLLREWPNQ 331
+ + +T P K+A L ++W Q
Sbjct: 262 VYDGSTQTWKPKDKDALTLVEHSKDWHTQ 290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 51/162 (31%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
IE LK + P + + + G +LA+ETIP EAQ+L LL E+P +A++SF+
Sbjct: 146 IEALKEFHRPRIQILLDQGVDLLALETIPNHLEAQVLIELLAEEFPEAEAYISFTVQEPG 205
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 206 TISDGTSLDEIAQLVGQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGEVYDG 265
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
W D+D V+ + DW + GV ++GGCCRT D
Sbjct: 266 STQTWKPKDKDALTLVE-HSKDWHTQFGVKILGGCCRTRPND 306
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNSGE YD
Sbjct: 207 ISDGTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGEVYD 264
>gi|357120326|ref|XP_003561878.1| PREDICTED: homocysteine S-methyltransferase 1-like [Brachypodium
distachyon]
Length = 369
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 173/394 (43%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D LWS+ L T + + H +++AGAD+++++SYQA+I
Sbjct: 17 VIDGGFATQLEALGADIND--SLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + L+++SV +ALEA
Sbjct: 75 PGFLA-RGLRQEEAEGLLRTSVH-----LALEA--------------------------- 101
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPA--RDILIAGSVGPYGASLRDGSEYRGDYV 183
RD E+ W +T L+A S+G YGA L DGSEY G Y
Sbjct: 102 RD--EF---------------WKSTLTKPKPIYNRALVAASIGSYGAFLADGSEYSGSYG 144
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
+++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS
Sbjct: 145 DNIMAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEDIQVPSWICFSS 204
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRPLMVSSLIEQLKTE-NIPLVVYP 300
D KH+ +GESF + +N + +A VGVNC P + +I + K + + VYP
Sbjct: 205 VDGKHLCSGESFGDCLQI---LNASEKVAIVGVNCTPPQFIEGIIREFKKQTGKAIAVYP 261
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAV 359
NSGE W + K WL C G + V
Sbjct: 262 NSGEV----------------------WDGRAKRWLPAEC------------FGRKSFDV 287
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
AR W + G +L+GGCCRT
Sbjct: 288 MAR---------------RWQEAGASLIGGCCRT 306
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRPLMVSPLIEQLKTE-NIPLVVYPN 567
D KH+ +GESF + +N + +A VGVNC P + +I + K + + VYPN
Sbjct: 206 DGKHLCSGESFGDCLQI---LNASEKVAIVGVNCTPPQFIEGIIREFKKQTGKAIAVYPN 262
Query: 568 SGERYD 573
SGE +D
Sbjct: 263 SGEVWD 268
>gi|406838319|ref|ZP_11097913.1| homocysteine methyltransferase [Lactobacillus vini DSM 20605]
Length = 307
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 165/390 (42%), Gaps = 119/390 (30%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + + LWS+ L T + Q HR + AGA I TN+YQA+
Sbjct: 18 DGAMATELEKL--GVNTANDLWSAAALLTEPAKITQVHRSYFAAGAMIATTNTYQANFAA 75
Query: 68 FME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + F + + QLIK +VD ++A + A+I ++ L+AGSVGPYGA L
Sbjct: 76 FQKRGFNQVQFQ---QLIKQAVDCARQA----QSSAKIPNE-----TLVAGSVGPYGAYL 123
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY G+Y ++EA +H L
Sbjct: 124 ADGSEYTGNY--QLTEAEFQNFHYL----------------------------------- 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
RI+AL+ A D+LAIET P E Q L +LL ++ AW+SFS KD
Sbjct: 147 ------------RIKALLAAQVDVLAIETQPKFAEVQALVKLLAAKFSQTTAWISFSIKD 194
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSG 303
+H+ +G Q A T N + Q+ AVG+NC L ++ ++ LK ++ PL+VYPN+G
Sbjct: 195 PQHLCDGTLLAQAA-TWLN-DQQQISAVGINCTDLLQITPALQTLKKYSVKPLIVYPNNG 252
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD V +W
Sbjct: 253 DE--------------------------------------------------YDPVTKQW 262
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ L + V W G ++GGCCRT
Sbjct: 263 QAKHLSQNFSDLVPQWQKNGARIIGGCCRT 292
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+ +G Q A T N + Q+ AVG+NC L ++P ++ LK ++ PL+VYPN+
Sbjct: 194 DPQHLCDGTLLAQAA-TWLN-DQQQISAVGINCTDLLQITPALQTLKKYSVKPLIVYPNN 251
Query: 569 GERYD 573
G+ YD
Sbjct: 252 GDEYD 256
>gi|225873019|ref|YP_002754478.1| homocysteine methyltransferase [Acidobacterium capsulatum ATCC
51196]
gi|225793009|gb|ACO33099.1| homocysteine S-methyltransferase [Acidobacterium capsulatum ATCC
51196]
Length = 310
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 170/399 (42%), Gaps = 116/399 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++++DGG +++L G I G PLWS++ L + +A+ H D+++AG+D + T SYQ
Sbjct: 11 RIRVLDGGMATELERR-GFNISG-PLWSAHVLDESPEAIQAVHLDYLRAGSDCISTVSYQ 68
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
S G+ E + DPA + SV
Sbjct: 69 ISAQGYAE--------------------------------LSRPDPAFATALRRSVA--- 93
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
E R Y + S R I IA S+GPYGA+L +G+E+ G+Y
Sbjct: 94 ----LAEEARARYAQENS----------------RPIWIAASLGPYGAALHNGAEFHGNY 133
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
++ + E+HR R+ L E GAD++A ETIP+ EA+ + L P+ AWLSF+C
Sbjct: 134 --SITFDDLVEFHRARLAVLAETGADLVAFETIPSLDEARAILTALTHTPNVSAWLSFTC 191
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPN 301
+D+ HI++GE A+ + Q++A+G+NC P V+ L+ +++ P++ YPN
Sbjct: 192 RDEAHIAHGEPLAACAQLLDSAV--QVLALGINCTAPRHVAPLLAAAQSQTRKPVIAYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE ++A
Sbjct: 250 SGE--------------------------------------------------SWNAATR 259
Query: 362 RWIDR-DLCEPVDKYVT---DWLDEGVALVGGCCRTYAE 396
W R DL V Y T W G +GGCCRT E
Sbjct: 260 AWQGRTDLAAEVKDYQTLAGQWFAAGAQAIGGCCRTTPE 298
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D+ HI++GE A+ + Q++A+G+NC P V+PL+ +++ P++ YPNS
Sbjct: 193 DEAHIAHGEPLAACAQLLDSAV--QVLALGINCTAPRHVAPLLAAAQSQTRKPVIAYPNS 250
Query: 569 GERYD 573
GE ++
Sbjct: 251 GESWN 255
>gi|42572531|ref|NP_974361.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
gi|332643565|gb|AEE77086.1| homocysteine S-methyltransferase 1 [Arabidopsis thaliana]
Length = 268
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 142/285 (49%), Gaps = 53/285 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGADIV+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV+ EA
Sbjct: 80 PGFLS-RGLSIEESESLLQKSVELAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + E VS+ + ++R L+A S+G YGA L DGSEY G Y E+
Sbjct: 107 ------RDRFWEKVSKVSGHSYNR---------ALVAASIGSYGAYLADGSEYSGHYGEN 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL 289
+ +GESF + N + AVG+NC P + +LI +
Sbjct: 212 GEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRKF 254
>gi|294794963|ref|ZP_06760098.1| homocysteine S-methyltransferase [Veillonella sp. 3_1_44]
gi|294454325|gb|EFG22699.1| homocysteine S-methyltransferase [Veillonella sp. 3_1_44]
Length = 337
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 173/395 (43%), Gaps = 90/395 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y DI H LWS+ L D + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGALGTELERYGCDI--QHKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A E A+ R I + G P G
Sbjct: 76 AGF-KGLGYGTEEAIELVKLSVRLAVQA-RNEFLEAKASGALTLRGITL-GEETPKG--- 129
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ + SE + + L+A SVGPYGA L DGSEYRG
Sbjct: 130 ----------IRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRG--YPD 165
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PR+ E DIL+ ETIP+ EA + R + + K AW++FSC
Sbjct: 166 VQTEYLEVFHIPRLALFCEENPDILSFETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSC 225
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+GE+ + A+ ++P + +G+NC +P V SLI+ ++T + P+ VYPN
Sbjct: 226 KDGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPN 283
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE YD+
Sbjct: 284 LGE--------------------------------------------------SYDSKTK 293
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W G ++GGCCRT E
Sbjct: 294 TWYG-DAASFVD-YVEVWRKAGAEIIGGCCRTTPE 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A+ ++P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 227 DGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPNL 284
Query: 569 GERYD 573
GE YD
Sbjct: 285 GESYD 289
>gi|170589659|ref|XP_001899591.1| probable homocysteine S-methyltransferase [Brugia malayi]
gi|158593804|gb|EDP32399.1| probable homocysteine S-methyltransferase, putative [Brugia malayi]
Length = 315
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 176/413 (42%), Gaps = 112/413 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
++++DGGF ++L VG I+ + LWS L D ++Q H+ FI+AG+DI++TNSYQA
Sbjct: 10 IQILDGGFGTELEA-VGYNIENNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQA 68
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
I M + +++ +K V ++A
Sbjct: 69 CINTMMSSHGMTKNAAESSLKKLVSLAEQA------------------------------ 98
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
++E ++ E + I GSVGPYG DGSEY G YV
Sbjct: 99 ---------------INECSVRE-----------KVKIVGSVGPYGVIFNDGSEYNGYYV 132
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
+ + + + ++H + L++AG ++A ET+P+ KEA + + + W+SFSC
Sbjct: 133 DEIEQQVLVDYHMQQTIPLLQAGLKVIAYETVPSYKEALAILKAADAIGYSYNFWISFSC 192
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT--ENIPLVVYP 300
K+DK ++ E F + + ++ +G+NC P ++ L++ T ++P +VYP
Sbjct: 193 KNDKQTNHNEDFCKSVEKI--AHHPSILGIGINCTSPNYITPLLQSASTSVNSLPFIVYP 250
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE VY +S +++
Sbjct: 251 NSGE-------------------------------------------VYEHSTKKWRIGK 267
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
R+ D + + +W D GV +VGGCCR AE + + SG S
Sbjct: 268 CRFPDIE-------QLIEWKDLGVKVVGGCCRVGAEKIKELSILVAKLNSGYS 313
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT--ENIPLVVYPN 567
+DK ++ E F + + ++ +G+NC P ++PL++ T ++P +VYPN
Sbjct: 194 NDKQTNHNEDFCKSVEKI--AHHPSILGIGINCTSPNYITPLLQSASTSVNSLPFIVYPN 251
Query: 568 SGERYD 573
SGE Y+
Sbjct: 252 SGEVYE 257
>gi|320546905|ref|ZP_08041207.1| homocysteine S-methyltransferase [Streptococcus equinus ATCC 9812]
gi|320448423|gb|EFW89164.1| homocysteine S-methyltransferase [Streptococcus equinus ATCC 9812]
Length = 314
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 60/303 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D+ LWS+ +L + H +++AGADI+ T+SYQA+I
Sbjct: 15 ILDGALGTELENRGYDV--SGKLWSAKYLLENPKVIQDLHEVYLRAGADIITTSSYQATI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + YG +
Sbjct: 73 QGLED--------------------------------------------------YGLTE 82
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
++ ++ V+ +A W+ L D+ ++ LI+G VGPY A L DGSEY G+Y
Sbjct: 83 QEATDTIALTVDLAKKARENVWNVLSDDEKSKRPYPLISGDVGPYAAYLADGSEYNGNY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
H+S+ ++H RI+AL+ AG D L IETIP EA+ L LL E+P +A++SF+
Sbjct: 142 -HLSKEEFKDFHCTRIKALLSAGCDFLGIETIPNVVEAEALIELLADEFPETEAYMSFTA 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+DD+ IS+G + VA C Q++A G+NC P ++S+L+++++T PLV YPN
Sbjct: 201 QDDESISDGTAIETVAALC--DASKQILAFGINCSSPAVISNLLKKIRTVSQKPLVTYPN 258
Query: 302 SGE 304
SGE
Sbjct: 259 SGE 261
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
DD+ IS+G + VA C Q++A G+NC P ++S L+++++T PLV YPNS
Sbjct: 202 DDESISDGTAIETVAALC--DASKQILAFGINCSSPAVISNLLKKIRTVSQKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEIYD 264
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 48/153 (31%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFS--------------------- 338
++G L IETIP EA+ L LL E+P +A++SF+
Sbjct: 161 SAGCDFLGIETIPNVVEAEALIELLADEFPETEAYMSFTAQDDESISDGTAIETVAALCD 220
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + + PLV YPNSGE YD V W D +
Sbjct: 221 ASKQILAFGINCSSPAVISNLLKKIRTVSQKPLVTYPNSGEIYDGVTQTWKSLPDHTHTL 280
Query: 373 DKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ W G +VGGCCRT +D + + L
Sbjct: 281 LENSQIWHQFGAKVVGGCCRTTPDDIACLTNHL 313
>gi|329296708|ref|ZP_08254044.1| homocysteine methyltransferase [Plautia stali symbiont]
Length = 291
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 122/241 (50%), Gaps = 57/241 (23%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPAS 218
+L+AGSVGPYGA L +G+EYRGDY E M ++HRPR+ AL+EAG D+L ET+P+
Sbjct: 96 LLVAGSVGPYGAYLANGAEYRGDYALPAVE--MKDFHRPRVAALLEAGVDLLTCETLPSF 153
Query: 219 KEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 278
E Q L LL E+PH AW SF+ +D +H+S+G ++VA Q++AVG+NCV
Sbjct: 154 GEIQALISLLAEFPHSSAWFSFTLRDAQHLSDGTPLSKVAEVINAAQ--QVVAVGLNCVA 211
Query: 279 PLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSF 337
V+ ++ L+ + PL+VYPNSGE
Sbjct: 212 LESVTPALQTLQALTDKPLLVYPNSGE--------------------------------- 238
Query: 338 SCKTENIPLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+YDAV+ W C DK+ +W G L+GGCCRT +
Sbjct: 239 -----------------QYDAVSKSWHSAPSGCTLHDKF-PEWQQAGARLIGGCCRTTPQ 280
Query: 397 D 397
D
Sbjct: 281 D 281
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D +H+S+G ++VA Q++AVG+NCV V+P ++ L+ + PL+VYPNS
Sbjct: 179 DAQHLSDGTPLSKVAEVINAAQ--QVVAVGLNCVALESVTPALQTLQALTDKPLLVYPNS 236
Query: 569 GERYD 573
GE+YD
Sbjct: 237 GEQYD 241
>gi|294792995|ref|ZP_06758141.1| homocysteine S-methyltransferase [Veillonella sp. 6_1_27]
gi|294455940|gb|EFG24304.1| homocysteine S-methyltransferase [Veillonella sp. 6_1_27]
Length = 337
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 90/395 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y DI H LWS+ L D + + H ++ AGADI+ ++ YQA++
Sbjct: 18 VLDGALGTELERYGCDI--QHKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A++A + + + +G++ +G L
Sbjct: 76 AGF-KGLGYGTEEAIELVKLSVR-----LAVQARNEFLEAKA-------SGALTLHGIKL 122
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E + V + SE + + L+A SVGPYGA L DGSEYRG
Sbjct: 123 ---GEETPEGVRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRG--YPD 165
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PR+ E DIL+ ETIP+ EA + R + + K W++FSC
Sbjct: 166 VQTEYLEIFHIPRLALFCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSC 225
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+GE+ + A+ ++P + +G+NC +P V SLI+ ++T + P+ VYPN
Sbjct: 226 KDGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPN 283
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE YD+
Sbjct: 284 LGE--------------------------------------------------SYDSKTK 293
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W G ++GGCCRT E
Sbjct: 294 TWYG-DAASFVD-YVEVWRKAGAEIIGGCCRTTPE 326
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A+ ++P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 227 DGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPNL 284
Query: 569 GERYD 573
GE YD
Sbjct: 285 GESYD 289
>gi|291558743|emb|CBL37543.1| homocysteine S-methyltransferase [butyrate-producing bacterium
SSC/2]
Length = 318
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 175/409 (42%), Gaps = 110/409 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ +IDG S+ L + LW++ LA + + Q H+++ KAGAD +T SYQ
Sbjct: 13 KIMVIDGSMSTPLENR--GVSLNSKLWTAKILAEQPELIKQVHKNYFKAGADCGITCSYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI G ME + + LI+S+V EA
Sbjct: 71 ASIPGLMEN-GYTLEEAENLIRSAVKIFCEA----------------------------- 100
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R ++ E W L G+ GPYGA L DGSEYRG+Y
Sbjct: 101 ---------RDEWWEEEGREARRAWP-----------LCLGAAGPYGAYLADGSEYRGNY 140
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+++ + E+H+ R++ L EAGADI+ ET+P+ KEA++ + E+ + W+SFSC
Sbjct: 141 --GITDEQLKEFHKRRVELLHEAGADIILFETVPSLKEAKVEAEIAEEYGYD-YWISFSC 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+ I G + A T P L +GVNC +P ++ LI ++K +IP+ VYPN
Sbjct: 198 LSENIICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE A++ + W +++ LSF
Sbjct: 257 SGEEYDAVKKV---------------WFGKQSALSF------------------------ 277
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYA---EDTLHMKHRLDD 407
++Y +++ G + VGGCC T A E+ + K R +
Sbjct: 278 -----------EQYAYNYMKSGASAVGGCCTTVAKHVEEVVRAKKRFSE 315
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERY 572
I G + A T P L +GVNC +P ++ LI ++K +IP+ VYPNSGE Y
Sbjct: 203 ICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPNSGEEY 261
Query: 573 D 573
D
Sbjct: 262 D 262
>gi|334128524|ref|ZP_08502412.1| homocysteine S-methyltransferase [Centipeda periodontii DSM 2778]
gi|333387201|gb|EGK58404.1| homocysteine S-methyltransferase [Centipeda periodontii DSM 2778]
Length = 308
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 165/393 (41%), Gaps = 112/393 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F++++ + D LWS+ L D V + H D+++AGAD+V + SYQ
Sbjct: 12 DVIVLDGAFATEIEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GFM+ + + LI+ S+ +EA L
Sbjct: 70 ATVEGFMK-RGFSKEEAAALIQKSIQLAQEACDL-------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+++E ++ R +A SVGPYGA L DGSEYRGDY
Sbjct: 103 ---------------YLAE----------REENGRVPFVAASVGPYGAYLADGSEYRGDY 137
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
+ E + +H R+ L A D+LA ET+P EA+ + R+LRE + AW SFS
Sbjct: 138 --GIDEDALVAFHAERLALLASAQPDLLACETLPCLVEARAIVRVLREKKIRIPAWFSFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYP 300
C+D HIS+G AR + + A+G+NC P V SLI +++ E P+VVYP
Sbjct: 196 CRDAAHISDGMEIAVCAR--WLDTVPEAAAIGLNCTAPQYVESLIGEIRRETTKPIVVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA +
Sbjct: 254 NSGET--------------------------------------------------YDASD 263
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W E W G L+GGCCRT
Sbjct: 264 KSW--HGAAEDFGTIARRWRTAGARLIGGCCRT 294
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 503 KHRLDDW------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK 556
K R+ W D HIS+G AR + + A+G+NC P V LI +++
Sbjct: 185 KIRIPAWFSFSCRDAAHISDGMEIAVCAR--WLDTVPEAAAIGLNCTAPQYVESLIGEIR 242
Query: 557 TENI-PLVVYPNSGERYD 573
E P+VVYPNSGE YD
Sbjct: 243 RETTKPIVVYPNSGETYD 260
>gi|167765702|ref|ZP_02437755.1| hypothetical protein CLOSS21_00190 [Clostridium sp. SS2/1]
gi|167712610|gb|EDS23189.1| homocysteine S-methyltransferase [Clostridium sp. SS2/1]
Length = 319
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 175/409 (42%), Gaps = 110/409 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ +IDG S+ L + LW++ LA + + Q H+++ KAGAD +T SYQ
Sbjct: 14 KIMVIDGSMSTPLENR--GVSLNSKLWTAKILAEQPELIKQVHKNYFKAGADCGITCSYQ 71
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI G ME + + LI+S+V EA
Sbjct: 72 ASIPGLMEN-GYTLEEAENLIRSAVKIFCEA----------------------------- 101
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R ++ E W L G+ GPYGA L DGSEYRG+Y
Sbjct: 102 ---------RDEWWEEEGREARRAWP-----------LCLGAAGPYGAYLADGSEYRGNY 141
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+++ + E+H+ R++ L EAGADI+ ET+P+ KEA++ + E+ + W+SFSC
Sbjct: 142 --GITDEQLKEFHKRRVELLHEAGADIILFETVPSLKEAKVEAEIAEEYGYD-YWISFSC 198
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+ I G + A T P L +GVNC +P ++ LI ++K +IP+ VYPN
Sbjct: 199 LSENIICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPN 257
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE A++ + W +++ LSF
Sbjct: 258 SGEEYDAVKKV---------------WFGKQSALSF------------------------ 278
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYA---EDTLHMKHRLDD 407
++Y +++ G + VGGCC T A E+ + K R +
Sbjct: 279 -----------EQYAYNYMKSGASAVGGCCTTVAKHVEEVVRAKKRFSE 316
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERY 572
I G + A T P L +GVNC +P ++ LI ++K +IP+ VYPNSGE Y
Sbjct: 204 ICEGTPIAECATTFAKGYP-HLKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPNSGEEY 262
Query: 573 D 573
D
Sbjct: 263 D 263
>gi|282849176|ref|ZP_06258561.1| homocysteine S-methyltransferase [Veillonella parvula ATCC 17745]
gi|282580880|gb|EFB86278.1| homocysteine S-methyltransferase [Veillonella parvula ATCC 17745]
Length = 341
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 174/395 (44%), Gaps = 90/395 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y DI H LWS+ L D + + H ++ AGADI+ ++ YQA++
Sbjct: 22 VLDGALGTELERYGCDI--QHKLWSAKVLMDQPDIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A++A + + + GA
Sbjct: 80 AGF-KGLGYGTEEAIELVKLSVR-----LAVQARNEFLEAKAS-------------GALT 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG + + E V R ++ L+A SVGPYGA L DGSEYRG
Sbjct: 121 LDGIKLGEETPEGV---------RYFSEGALPKPLVAASVGPYGAFLADGSEYRG--YPD 169
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PR+ E DIL+ ETIP+ EA + R + + K W++FSC
Sbjct: 170 VQTEYLEIFHIPRLALFCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSC 229
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+GE+ + A+ ++P + +G+NC +P V SLI+ ++T + P+ VYPN
Sbjct: 230 KDGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPN 287
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE YD+
Sbjct: 288 LGE--------------------------------------------------SYDSKTK 297
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W G ++GGCCRT E
Sbjct: 298 TWYG-DAASFVD-YVEVWRKAGAEIIGGCCRTTPE 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A+ ++P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 231 DGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPNL 288
Query: 569 GERYD 573
GE YD
Sbjct: 289 GESYD 293
>gi|401421000|ref|XP_003874989.1| putative homocysteine S-methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491225|emb|CBZ26491.1| putative homocysteine S-methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 320
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 168/404 (41%), Gaps = 117/404 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG +++L T D++D PLWS L + + ++++AGA ++T SYQ
Sbjct: 10 HVVVLDGGLATELETRGCDLLD--PLWSGKALLESPQQIQDVALEYLRAGARCIITASYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ ME L D++ I+ SV +
Sbjct: 68 ITPQSLMEHRGLTEDAAVAAIEESVRIAQ------------------------------- 96
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
T+ E H L A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 97 --------------------TVRERH-LKEKPQAAPVFVAGSVGPYGAYLSDGSEYRGDY 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
V E E+HR RI AL+ AGAD+LAIET P++ E + + LL+ E PH +AW+SF+
Sbjct: 136 VRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIVALLQEEHPHCRAWVSFT 193
Query: 242 C---KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLV 297
+ IS+G + + + Q++AVGVNC+ S+++ L T +PLV
Sbjct: 194 TSRISPVEAISDGTKWADI--ISFLEKAPQVVAVGVNCISMGEASAVLAHLHTLTTMPLV 251
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VY NSGE YD
Sbjct: 252 VYTNSGE--------------------------------------------------SYD 261
Query: 358 AVNARW----IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
V W + + + +W G L+GGCCRT D
Sbjct: 262 TVTRTWHPIAMSDGTTMSLAAFAPEWASHGARLIGGCCRTGPSD 305
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
Q++AVGVNC+ S ++ L T +PLVVY NSGE YD
Sbjct: 221 QVVAVGVNCISMGEASAVLAHLHTLTTMPLVVYTNSGESYD 261
>gi|383757004|ref|YP_005435989.1| homocysteine S-methyltransferase MmuM [Rubrivivax gelatinosus
IL144]
gi|381377673|dbj|BAL94490.1| homocysteine S-methyltransferase MmuM [Rubrivivax gelatinosus
IL144]
Length = 310
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 172/404 (42%), Gaps = 106/404 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ ++DG +++L D+ D PLWS+ L + + + H D+ +AGAD+ T SYQ
Sbjct: 10 DILVLDGALATELERRGADLKD--PLWSAKLLIERPELIREVHLDYFRAGADVATTASYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF +D + L++ SV A+A+EA
Sbjct: 68 ATFEGFAR-RGFSHDEAGALMRRSV-----ALAIEA------------------------ 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD A W R L+A SVGPYGA L DGSEYRG
Sbjct: 98 ---RD-----------------AFWAEPANRAGRRRPLVAASVGPYGAMLADGSEYRG-- 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFS 241
V+ +A +HRPR+Q L AGAD+LA ETIP EA + LL P AW+SFS
Sbjct: 136 YPGVTREQLAAFHRPRLQVLAAAGADLLACETIPCLDEALAIASLLPGLQPALPAWISFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPN 301
C+D +H+S GE F A + + AVG+NC P E++P +V
Sbjct: 196 CRDGEHVSQGERFADCAAALDGL--PGVAAVGLNCTAP------------EHVPALV--- 238
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
AQ RL P+VVYPNSGE++DAV
Sbjct: 239 --------------AAAQARTRL--------------------PIVVYPNSGEQWDAVAK 264
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W W G L+GGCCRT ++ ++ L
Sbjct: 265 CWHGERDAADFAAQAQRWRRGGARLIGGCCRTGPDEIRALRAAL 308
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D +H+S GE F A + + AVG+NC P V L+ + +P+VVYPNS
Sbjct: 198 DGEHVSQGERFADCAAALDGL--PGVAAVGLNCTAPEHVPALVAAAQARTRLPIVVYPNS 255
Query: 569 GERYD 573
GE++D
Sbjct: 256 GEQWD 260
>gi|374709133|ref|ZP_09713567.1| homocysteine methyltransferase [Sporolactobacillus inulinus CASD]
Length = 315
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 170/399 (42%), Gaps = 110/399 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG ++++ + G +D LWS+ + + V Q H D+ K+GADI TN+YQ
Sbjct: 14 NPIILDGAMATEIEKH-GIALDSE-LWSAAVIQEHPEVVKQVHLDYFKSGADIATTNTYQ 71
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ L + S G
Sbjct: 72 ATL--------LGFQQS------------------------------------------G 81
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRG 180
S ++ V+ ++A W L A LIAGSVGPYGA L DGSEY G
Sbjct: 82 YSEQEAERIISKTVQLAADARAEFWASLSPQQQASRPYPLIAGSVGPYGAYLADGSEYSG 141
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLS 239
DY ++E +H+ R+Q L +AG D+ A ET+P EAQ L +LL + +P +AWLS
Sbjct: 142 DYT--LNEGGYRMFHQSRMQLLKKAGIDLFAFETMPNFAEAQALAKLLNDAFPEDEAWLS 199
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVV 298
FS KD +H+ +G + A +N N DQ+ A+GVNC + + I +++ P+VV
Sbjct: 200 FSLKDPEHLCDGTPLAEAA-AFFNDN-DQIAAIGVNCFSMMKIDQAIPVIRSATRKPIVV 257
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSGE I+ I W + K SF +DA
Sbjct: 258 YPNSGEKYHPIKKI---------------WISSKHRPSF------------------FDA 284
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W G L+GGCCRT +D
Sbjct: 285 SKT-----------------WAKAGATLIGGCCRTSPDD 306
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 483 EGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 542
E AL + ED + L D +H+ +G + A +N N DQ+ A+GVNC
Sbjct: 179 EAQALAKLLNDAFPEDEAWLSFSLKD--PEHLCDGTPLAEAA-AFFNDN-DQIAAIGVNC 234
Query: 543 VRPLMVSPLIEQLKTEN-IPLVVYPNSGERY 572
+ + I +++ P+VVYPNSGE+Y
Sbjct: 235 FSMMKIDQAIPVIRSATRKPIVVYPNSGEKY 265
>gi|302799886|ref|XP_002981701.1| hypothetical protein SELMODRAFT_179106 [Selaginella moellendorffii]
gi|300150533|gb|EFJ17183.1| hypothetical protein SELMODRAFT_179106 [Selaginella moellendorffii]
Length = 326
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 171/388 (44%), Gaps = 102/388 (26%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF++QL + + D PLWS+ L T + + H +++++GA++++T+SYQA++ G
Sbjct: 26 DGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTSSYQATLQG 83
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F I+LE + A +R S+
Sbjct: 84 FQS---------------------RGISLEESEALLRK------------------SVTL 104
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
E R D A AE + P L+A S+G YGA L DGSEY GDY ++
Sbjct: 105 ACEAR-DRFWRTKRAQKAERF----NRP----LVAASIGSYGAFLADGSEYSGDYGPGMT 155
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKDDK 246
+ ++HR R+Q L G D+LAIETIP+ EAQ LL E AW++FS KD K
Sbjct: 156 LKKLKDFHRRRLQILSSCGPDLLAIETIPSKLEAQAFIELLGEEDIDVPAWIAFSSKDGK 215
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYPNSGEH 305
++ +G++F++ D+++AVG+NC P V LI E K + +VVYPNSGE
Sbjct: 216 NVVSGDNFSESIAMLDKC--DKVVAVGINCCPPHFVEGLIHEARKATSKTIVVYPNSGEQ 273
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
P K W V R +
Sbjct: 274 YD---------------------PKTKLW-----------------------KVQERNCE 289
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+D +V +W G ++GGCCRT
Sbjct: 290 KDFM----AFVKNWKRAGANVIGGCCRT 313
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLI-EQLKTENIPLVVYPNS 568
D K++ +G++F++ D+++AVG+NC P V LI E K + +VVYPNS
Sbjct: 213 DGKNVVSGDNFSESIAMLDKC--DKVVAVGINCCPPHFVEGLIHEARKATSKTIVVYPNS 270
Query: 569 GERYD 573
GE+YD
Sbjct: 271 GEQYD 275
>gi|224102091|ref|XP_002312542.1| homocysteine s-methyltransferase [Populus trichocarpa]
gi|222852362|gb|EEE89909.1| homocysteine s-methyltransferase [Populus trichocarpa]
Length = 339
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 185/393 (47%), Gaps = 99/393 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L + D+ D PLWS+ L ++ V + H D++ AGA+I+ T SYQA+I
Sbjct: 25 VVDGGFATELERHGADLND--PLWSAKCLISSPHLVRKVHLDYLHAGANIITTASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + + L++ SV+ IA EA R+I Y
Sbjct: 83 QGFVA-KGLSEEEAELLLRRSVE-----IACEA-----------REIY-------YDKCT 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
GS DY+E + R +L+A S+G YGA L DGSEY G Y +
Sbjct: 119 TKGSL---DYIES-------------GNISRRPVLVAASIGSYGAYLADGSEYSGKYGDA 162
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
VS T+ ++HR R+Q L ++GAD++A ETIP EA+ LL E + AW SF+ KD
Sbjct: 163 VSLRTLKDFHRRRLQILAKSGADLIAFETIPNKLEAKAYAELLEEEEINIPAWFSFNSKD 222
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A +C +++AVG+NC P + L+ + K + P+V+YP
Sbjct: 223 GINVVSGDSILECASIADSC-----KRVVAVGINCTPPRFIHGLVLSIQKATSKPIVIYP 277
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE A L++W +
Sbjct: 278 NSGETYNA---------------ELKQWVKSSGVV------------------------- 297
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+D D Y+ W + G +L GGCCRT
Sbjct: 298 ---VDEDFVS----YIGKWREAGASLFGGCCRT 323
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D ++ +G+S + +A +C +++AVG+NC P + L+ + K + P
Sbjct: 218 FNSKDGINVVSGDSILECASIADSC-----KRVVAVGINCTPPRFIHGLVLSIQKATSKP 272
Query: 562 LVVYPNSGERYDFHL 576
+V+YPNSGE Y+ L
Sbjct: 273 IVIYPNSGETYNAEL 287
>gi|400290207|ref|ZP_10792234.1| homocysteine methyltransferase [Streptococcus ratti FA-1 = DSM
20564]
gi|399920998|gb|EJN93815.1| homocysteine methyltransferase [Streptococcus ratti FA-1 = DSM
20564]
Length = 318
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 180/410 (43%), Gaps = 120/410 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L D + H ++++G+DIV T+SYQAS+
Sbjct: 15 ILHGALGTELE-FLGHDVSGK-LWSAKYLLEDPDLIQSIHETYLRSGSDIVTTSSYQASL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA-------IALEATHARIRSDDPARDILIAGSV 118
G ++ L + + + I +VD K+A ++ + H R LI+G V
Sbjct: 73 QGLCDY-GLSQEEAEKTIALTVDLAKKAREKVWQGLSEKEKHGRPYP-------LISGDV 124
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
GPY A L DGSEY GDY GS+ G
Sbjct: 125 GPYAAYLADGSEYTGDY---------------------------GSIDKEG--------- 148
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAW 237
+ ++HRPRI L+E G+D+LA+ETIP+ EA+ L LL+ E+P +A+
Sbjct: 149 ------------LKDFHRPRIAVLLEKGSDLLALETIPSFLEAKALTELLQEEFPAAEAY 196
Query: 238 LSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPL 296
+SF+ ++ IS+G + +VA + P Q++A+G+NC PL+ + L++++ T + PL
Sbjct: 197 MSFTAQNSSSISDGTAIEEVA-ALLDAAP-QILALGINCSSPLVYTDLLKKMSTVTDKPL 254
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V YPNSGE Y
Sbjct: 255 VTYPNSGE--------------------------------------------------VY 264
Query: 357 DAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D + W D + + W + G +VGGCCRT D + L
Sbjct: 265 DGQHQTWTQTADRSHTLLENTVSWQNLGAKIVGGCCRTRPSDIESLSQGL 314
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERY 572
IS+G + +VA + P Q++A+G+NC PL+ + L++++ T + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVA-ALLDAAP-QILALGINCSSPLVYTDLLKKMSTVTDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|77411163|ref|ZP_00787515.1| homocysteine S-methyltransferase [Streptococcus agalactiae CJB111]
gi|77162781|gb|EAO73740.1| homocysteine S-methyltransferase [Streptococcus agalactiae CJB111]
Length = 348
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 178/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 49 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 106
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 107 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 133
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 134 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 175
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G DILA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 176 -DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 234
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A++ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 235 QDGKTISDGSAVADLAKSI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 292
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 293 SGE--------------------------------------------------VYDGASQ 302
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 303 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 347
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A++ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 236 DGKTISDGSAVADLAKSI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 293
Query: 569 GERYD 573
GE YD
Sbjct: 294 GEVYD 298
>gi|416999946|ref|ZP_11940331.1| putative homocysteine S-methyltransferase [Veillonella parvula
ACS-068-V-Sch12]
gi|333976382|gb|EGL77250.1| putative homocysteine S-methyltransferase [Veillonella parvula
ACS-068-V-Sch12]
Length = 341
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 178/395 (45%), Gaps = 90/395 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y DI H LWS+ L + + + H ++ AGADI+ ++ YQA++
Sbjct: 22 VLDGALGTELERYGCDI--QHKLWSAKVLMDQPEIIKKIHISYLAAGADIIQSSGYQATV 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + L + + +L+K SV +A++A + + + +G++ +G L
Sbjct: 80 AGF-KGLGYGTEEAIELVKLSVR-----LAVQARNEFLEAKA-------SGALTLHGIKL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E + V + SE + + L+A SVGPYGA L DGSEYRG
Sbjct: 127 ---GEETPEGVRYFSEGALPK------------PLVAASVGPYGAFLADGSEYRG--YPD 169
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK---AWLSFSC 242
V + +H PR+ E DIL+ ETIP+ EA + R + + K W++FSC
Sbjct: 170 VQTEYLEIFHIPRLALFCEEHPDILSFETIPSYAEAIAIARAMSDPFTSKGIPGWIAFSC 229
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
KD H+S+GE+ + A+ ++P + +G+NC +P V SLI+ ++T + P+ VYPN
Sbjct: 230 KDGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPN 287
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE YD+
Sbjct: 288 LGE--------------------------------------------------SYDSKTK 297
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W D VD YV W G ++GGCCRT E
Sbjct: 298 TWYG-DAASFVD-YVEVWRKAGAEIIGGCCRTTPE 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D H+S+GE+ + A+ ++P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 231 DGHHVSSGETIIKCAQMIDKVHP--ITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPNL 288
Query: 569 GERYD 573
GE YD
Sbjct: 289 GESYD 293
>gi|22537452|ref|NP_688303.1| homocysteine methyltransferase [Streptococcus agalactiae 2603V/R]
gi|22534329|gb|AAN00176.1|AE014251_20 homocysteine S-methyltransferase MmuM, putative [Streptococcus
agalactiae 2603V/R]
Length = 314
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 73 QGLAQ-VGVSESQTEDLIRLTVQLAKAA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 100 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G DILA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 201 QDGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------VYDGASQ 268
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 313
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 202 DGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEVYD 264
>gi|421148131|ref|ZP_15607797.1| homocysteine methyltransferase [Streptococcus agalactiae GB00112]
gi|401685107|gb|EJS81121.1| homocysteine methyltransferase [Streptococcus agalactiae GB00112]
Length = 314
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 73 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 100 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G DILA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 201 QDGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------VYDGASQ 268
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 313
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 202 DGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEVYD 264
>gi|398025214|ref|XP_003865768.1| homocysteine S-methyltransferase, putative [Leishmania donovani]
gi|322504005|emb|CBZ39092.1| homocysteine S-methyltransferase, putative [Leishmania donovani]
Length = 379
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 163/348 (46%), Gaps = 70/348 (20%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG +++L T D++D PLWS L + + +++AGA ++T SYQ
Sbjct: 69 QVVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIITASYQ 126
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ ME L D++ I+ SV +
Sbjct: 127 ITPQSLMEHRGLTEDAAVAAIEESVRIAQ------------------------------- 155
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDP-ARDILIAGSVGPYGASLRDGSEYRGD 181
S+R+ R + + P A + +AGSVGPYGA L DGSEYRGD
Sbjct: 156 -SVRE---------------------RHLKEKPQAAPVFVAGSVGPYGAYLADGSEYRGD 193
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSF 240
YV E E+HR RI AL+ AGAD+LAIET P++ E + + LL+ E P+ +AW+SF
Sbjct: 194 YVRSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIVALLQEEHPNCRAWVSF 251
Query: 241 SC---KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPL 296
+ + IS+G + + + Q++AVGVNC+ S+++ L T +PL
Sbjct: 252 TTSRISPVEAISDGTKWADI--ISFLEKAPQVVAVGVNCIPMAEASAVLAHLHTLTTMPL 309
Query: 297 VVYPNSGEHILAI----ETIPASKEAQM-LCRLLREWPNQKAWLSFSC 339
VVY NSGE + IP + L L REW + A L C
Sbjct: 310 VVYTNSGESYDTVTRTWHPIPMRDGTTLSLAALAREWASHGARLVGGC 357
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
Q++AVGVNC+ S ++ L T +PLVVY NSGE YD
Sbjct: 280 QVVAVGVNCIPMAEASAVLAHLHTLTTMPLVVYTNSGESYD 320
>gi|449434616|ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
sativus]
gi|449493450|ref|XP_004159294.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
sativus]
Length = 328
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 181/392 (46%), Gaps = 106/392 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL + I D PLWS+ L + + H ++++AGADI++++SYQA+I
Sbjct: 22 VIDGGFATQLEKHGAVIND--PLWSAVCLINDPHLIKKVHLEYLEAGADILVSSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L++ SV +A+EA
Sbjct: 80 PGFIS-KGLSVEEGELLLEKSVK-----LAIEA--------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + V +++R L+A S+G YGA L DGSEY G Y
Sbjct: 107 ------RDSFWDSVKCIPGHKYNR---------ALVAASIGSYGAYLADGSEYSGHYGPD 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ + ++HR R+Q V+A D+LA ETIP EAQ LL E Q +W+ FS D
Sbjct: 152 VNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELLEEENIQIPSWICFSSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
++ +GESF + Y +N D++ AVG+NC P + +LI + K N +VVYPNS
Sbjct: 212 GENAPSGESFE---KCLYAINKSDKVNAVGINCTPPHFIEALITKFKELTNKHIVVYPNS 268
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W + K WL +C + ++++++++
Sbjct: 269 GE----------------------VWDGRFKKWLPSNCFGD-----------DKFESLSS 295
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
RW R+L G +GGCCRT
Sbjct: 296 RW--RNL--------------GATFIGGCCRT 311
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPN 567
D ++ +GESF + Y +N D++ AVG+NC P + LI + K N +VVYPN
Sbjct: 211 DGENAPSGESFE---KCLYAINKSDKVNAVGINCTPPHFIEALITKFKELTNKHIVVYPN 267
Query: 568 SGERYD 573
SGE +D
Sbjct: 268 SGEVWD 273
>gi|387761727|ref|YP_006068704.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius 57.I]
gi|339292494|gb|AEJ53841.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius 57.I]
Length = 316
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 166/329 (50%), Gaps = 56/329 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ + DI LWS+ +L + + + H ++ AG+D++ T+SYQA++
Sbjct: 15 ILHGALGTEMESLGYDI--SGKLWSAKYLLEKPEVIQKIHETYVAAGSDLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + Q+I +V K+A RD + A
Sbjct: 73 PGLID-AGLTKEEAEQIIALTVQLAKDA----------------RDKVWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
T+ E + P LI+G VGPY A L +GSEY GDY +
Sbjct: 106 -----------------TLDETEKAKRPYP----LISGDVGPYAAYLANGSEYTGDYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
++ + E+HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+ ++
Sbjct: 144 ITIKELKEFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTVQE 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNSGE
Sbjct: 204 PGTISDGTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGE 261
Query: 305 -HILAIET-IPASKEAQMLCRLLREWPNQ 331
+ + +T P K+A L ++W Q
Sbjct: 262 VYDGSTQTWKPKDKDALTLVEHSKDWHTQ 290
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 51/162 (31%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
I++LK + P + + + G +LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 146 IKELKEFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTVQEPG 205
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 206 TISDGTSLDEIAQLVGQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGEVYDG 265
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
W D+D V+ + DW + GV ++GGCCRT D
Sbjct: 266 STQTWKPKDKDALTLVE-HSKDWHTQFGVKILGGCCRTRPND 306
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNSGE YD
Sbjct: 207 ISDGTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALAILKNAGKALITYPNSGEVYD 264
>gi|76799284|ref|ZP_00781452.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Streptococcus agalactiae 18RS21]
gi|76585361|gb|EAO61951.1| Homocysteine S-methyltransferase (S-methylmethionine:homocysteine
methyltransferase) [Streptococcus agalactiae 18RS21]
Length = 348
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 49 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 106
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 107 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 133
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 134 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 175
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G DILA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 176 -DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 234
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 235 QDGKTISDGSAVADLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 292
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 293 SGE--------------------------------------------------VYDGASQ 302
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 303 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 347
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 236 DGKTISDGSAVADLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 293
Query: 569 GERYD 573
GE YD
Sbjct: 294 GEVYD 298
>gi|302768791|ref|XP_002967815.1| hypothetical protein SELMODRAFT_88753 [Selaginella moellendorffii]
gi|300164553|gb|EFJ31162.1| hypothetical protein SELMODRAFT_88753 [Selaginella moellendorffii]
Length = 326
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 171/388 (44%), Gaps = 102/388 (26%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF++QL + + D PLWS+ L T + + H +++++GA++++T+SYQA++ G
Sbjct: 26 DGGFATQLEKHGALLND--PLWSALCLITNPGLIAKVHWEYLESGAEVLVTSSYQATLQG 83
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F I+LE + A +R S+
Sbjct: 84 FQS---------------------RGISLEESEALLRK------------------SVTL 104
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
E R D A AE + P L+A S+G YGA L DGSEY GDY ++
Sbjct: 105 ACEAR-DRFWRTKRAQGAERF----NRP----LVAASIGSYGAFLADGSEYSGDYGPGMT 155
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKDDK 246
+ ++HR R+Q L G D+LAIETIP+ EAQ LL E AW++FS KD K
Sbjct: 156 LKKLKDFHRRRLQILSSCGPDLLAIETIPSKLEAQAFIELLGEEDIDVPAWIAFSSKDGK 215
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYPNSGEH 305
++ +G++F++ D+++AVG+NC P V LI E K + +VVYPNSGE
Sbjct: 216 NVVSGDNFSESIAMLDKC--DKVVAVGINCCPPHFVEGLIHEARKATSKTIVVYPNSGEQ 273
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
P K W V R +
Sbjct: 274 YD---------------------PKTKLW-----------------------KVQERNCE 289
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+D +V +W G ++GGCCRT
Sbjct: 290 KDFM----AFVKNWKRAGANVIGGCCRT 313
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLI-EQLKTENIPLVVYPNS 568
D K++ +G++F++ D+++AVG+NC P V LI E K + +VVYPNS
Sbjct: 213 DGKNVVSGDNFSESIAMLDKC--DKVVAVGINCCPPHFVEGLIHEARKATSKTIVVYPNS 270
Query: 569 GERYD 573
GE+YD
Sbjct: 271 GEQYD 275
>gi|77409797|ref|ZP_00786446.1| homocysteine S-methyltransferase [Streptococcus agalactiae COH1]
gi|77171596|gb|EAO74816.1| homocysteine S-methyltransferase [Streptococcus agalactiae COH1]
Length = 341
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 42 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 99
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 100 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 127 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 168
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G DILA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 169 -DIDKQGLKNFHRHRIELLLDEGVDILALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 227
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 228 QDGKTISDGSAVADLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 285
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 286 SGE--------------------------------------------------VYDGASQ 295
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 296 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 340
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 229 DGKTISDGSAVADLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 286
Query: 569 GERYD 573
GE YD
Sbjct: 287 GEVYD 291
>gi|417089877|ref|ZP_11955769.1| homocysteine S-methyltransferase [Streptococcus suis R61]
gi|353533818|gb|EHC03458.1| homocysteine S-methyltransferase [Streptococcus suis R61]
Length = 315
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 158/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + G + G LWS+ +L + H+D+I+AGAD+V T++YQA+
Sbjct: 15 ILHGALGTELE-FRGYDVSGK-LWSAKYLLENPQLIKDIHKDYIRAGADLVTTSTYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E + L + +LI+ +VD KEA ++ +A
Sbjct: 73 EGLAE-VGLSQAEAEELIRLTVDLAKEA---------------REEVWVA---------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E ++ P LI+G VGPY A L +G+EY GDY +
Sbjct: 107 ------------------LSEAEKVQRTYP----LISGDVGPYAAYLANGAEYTGDY-GN 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+S + +HR R++ L+E GA++LA+ETIP EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ISLEELKAFHRRRMELLLEQGAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+ IS+G S ++A + +Q++AVG+NC P + + + QL+ + + P V YPNSG
Sbjct: 204 GQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 63/159 (39%), Gaps = 57/159 (35%)
Query: 303 GEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCK--------------------T 341
G +LA+ETIP EAQ L LL E +P +A++SF+ + +
Sbjct: 164 GAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQDGQSISDGTSIEKIAELVNSS 223
Query: 342 ENI--------------------------PLVVYPNSGERYDAVNARWIDR--DLCEPVD 373
E I P V YPNSGE YD W ++ D +D
Sbjct: 224 EQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSGEVYDGATQTWKEKADDSHSLLD 283
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGL 412
+ W G +VGGCCRT D + D V+GL
Sbjct: 284 NTLV-WHKLGAKVVGGCCRTRPAD-------IADLVAGL 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + IS+G S ++A + +Q++AVG+NC P + + QL+ + + P V YPNS
Sbjct: 203 DGQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEVYD 265
>gi|430845399|ref|ZP_19463289.1| hypothetical protein OGQ_02312 [Enterococcus faecium E1050]
gi|430495609|gb|ELA71765.1| hypothetical protein OGQ_02312 [Enterococcus faecium E1050]
Length = 306
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 148/305 (48%), Gaps = 70/305 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V LIDG S L D+ D LW++ L D + + H+ + AGA+I +T SYQ
Sbjct: 11 KVILIDGSMSLGLEEQGLDLND--ELWTAKALVNEPDKIEKVHQKYYDAGANIAITASYQ 68
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GF + L + S LIK +V+ A A+ +S
Sbjct: 69 ATVAGF-DRLGHTTEESRALIKRTVEL--------AKQAQTKS----------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ +W +A SVGPYGA L DGSEYRG+Y
Sbjct: 103 ------------------QGLQEKW-------------VAASVGPYGAYLADGSEYRGNY 131
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S+ + ++HR R++ L+E+GAD+LAIETIP E Q + LL + P AWL+ +
Sbjct: 132 --GLSQTELVDFHRERLELLLESGADLLAIETIPDLTEIQAVIELLAQHPKTTAWLTVTL 189
Query: 243 KDDKHISNGES---FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVV 298
KDD H+ +G F +A + +Q+IA GVNCV+P +V +E LK PLV
Sbjct: 190 KDDHHLCDGTDLRVFQLLAES-----SEQIIAYGVNCVQPDLVLPALEYLKEIATKPLVA 244
Query: 299 YPNSG 303
YPNSG
Sbjct: 245 YPNSG 249
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 53/148 (35%), Gaps = 47/148 (31%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK--------------------T 341
SG +LAIETIP E Q + LL + P AWL+ + K +
Sbjct: 152 SGADLLAIETIPDLTEIQAVIELLAQHPKTTAWLTVTLKDDHHLCDGTDLRVFQLLAESS 211
Query: 342 ENI--------------------------PLVVYPNSGERYDAVNARWIDRDLCEPV-DK 374
E I PLV YPNSG YDA W + V
Sbjct: 212 EQIIAYGVNCVQPDLVLPALEYLKEIATKPLVAYPNSGATYDATTKVWTHSHAVDEVFSN 271
Query: 375 YVTDWLDEGVALVGGCCRTYAEDTLHMK 402
W G +GGCC T A++ +K
Sbjct: 272 EALKWHGSGCKWIGGCCCTSAKEISLLK 299
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGES---FTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVY 565
DD H+ +G F +A + +Q+IA GVNCV+P +V P +E LK PLV Y
Sbjct: 191 DDHHLCDGTDLRVFQLLAES-----SEQIIAYGVNCVQPDLVLPALEYLKEIATKPLVAY 245
Query: 566 PNSGERYD 573
PNSG YD
Sbjct: 246 PNSGATYD 253
>gi|322372513|ref|ZP_08047049.1| homocysteine S-methyltransferase [Streptococcus sp. C150]
gi|321277555|gb|EFX54624.1| homocysteine S-methyltransferase [Streptococcus sp. C150]
Length = 322
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 54/300 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ T+SYQA++
Sbjct: 21 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKPEVIQEIHETYVAAGADLITTSSYQATL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ME L + Q+I +V K A RD + A
Sbjct: 79 PGLME-AGLTEREAEQIIALTVQLAKAA----------------RDKVWA---------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
T+ E + P LI+G VGPY A L +GSEY GDY +
Sbjct: 112 -----------------TLDETEKAKRPYP----LISGDVGPYAAYLANGSEYTGDYGQ- 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
V+ T+ ++HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+ +
Sbjct: 150 VTVETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALVELLAEEFPEVEAYISFTIQV 209
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+G S ++A+ N Q++AVG+NC P++ + LK L+ YPNSGE
Sbjct: 210 PDAISDGTSLDEMAKLVSQSN--QILAVGINCSSPILYEQALPVLKKAGKALITYPNSGE 267
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L+D++ P + I D + VD + + E ALV + E ++
Sbjct: 148 GQVTVETLKDFHRPRIQILLD--QGVDLLALETIPNHLEAQALVELLAEEFPEVEAYISF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S ++A+ N Q++AVG+NC P++ + LK L+
Sbjct: 206 TIQVPD--AISDGTSLDEMAKLVSQSN--QILAVGINCSSPILYEQALPVLKKAGKALIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEVYD 270
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 49/161 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKT-- 341
+E LK + P + + + G +LA+ETIP EAQ L LL E+P +A++SF+ +
Sbjct: 152 VETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALVELLAEEFPEVEAYISFTIQVPD 211
Query: 342 -----------------------------------ENIP--------LVVYPNSGERYDA 358
+ +P L+ YPNSGE YD
Sbjct: 212 AISDGTSLDEMAKLVSQSNQILAVGINCSSPILYEQALPVLKKAGKALITYPNSGEVYDG 271
Query: 359 VNARWIDRDL-CEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
+ W +D + ++ DW GV ++GGCCRT D
Sbjct: 272 DSQTWKPKDKDALTLLEHSKDWHAHFGVQILGGCCRTRPND 312
>gi|396482943|ref|XP_003841585.1| similar to homocysteine S-methyltransferase [Leptosphaeria maculans
JN3]
gi|312218160|emb|CBX98106.1| similar to homocysteine S-methyltransferase [Leptosphaeria maculans
JN3]
Length = 333
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 161/347 (46%), Gaps = 62/347 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++ L T DI LWS+ L + Q H D+ +AGA I +T SYQAS+
Sbjct: 17 ILDGALATYLETLGADISGA--LWSADILLKNPSLIKQAHLDYYRAGAQIAITASYQASL 74
Query: 66 GGFMEFLD---LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
G ++ L + D +++++SV ++A
Sbjct: 75 PGLVQHLGPGTVGEDEVKEVVRTSVRLAQQA----------------------------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R +YV + E T P + +AGSVGPYGA L +GSEYRGDY
Sbjct: 106 ---------RDEYVAERTREGAGE-----TSTPPPQLWVAGSVGPYGAFLANGSEYRGDY 151
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
+ M +HR RI ALV AGADILA+ETIP+ +E L LLR E+P KAW +F+
Sbjct: 152 --ELPIPAMQAFHRGRIAALVSAGADILALETIPSKQETIALLDLLRHEFPTTKAWFTFT 209
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-------ENI 294
I++G ++ + Q++A+G NCV + + ++ LKT +
Sbjct: 210 LAGPDAIADGTPLAEL--VPLFRHEAQVLALGFNCVPDGVGLAAVKVLKTVLLEQGMARV 267
Query: 295 PLVVYPNSGE--HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
V+YPNSGE + A E + E +L REW A L C
Sbjct: 268 GTVMYPNSGELWNARAREWEGSRTEGGLLGEKTREWYAAGARLIGGC 314
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 63/162 (38%), Gaps = 54/162 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-----------TENIPL-- 346
++G ILA+ETIP+ +E L LLR E+P KAW +F+ E +PL
Sbjct: 171 SAGADILALETIPSKQETIALLDLLRHEFPTTKAWFTFTLAGPDAIADGTPLAELVPLFR 230
Query: 347 ---------------------------------------VVYPNSGERYDAVNARW-IDR 366
V+YPNSGE ++A W R
Sbjct: 231 HEAQVLALGFNCVPDGVGLAAVKVLKTVLLEQGMARVGTVMYPNSGELWNARAREWEGSR 290
Query: 367 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+ + +W G L+GGCCRT D M+ L+ +
Sbjct: 291 TEGGLLGEKTREWYAAGARLIGGCCRTTPGDIGVMREALEGF 332
>gi|308180236|ref|YP_003924364.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308045727|gb|ADN98270.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 309
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 163/401 (40%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAAQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV+ D +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVT-----------------DAVIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ WP Q W+SFS KD +
Sbjct: 134 PSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S A+ + ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLAATAK--WVAAQPNVVAVGVNCTTLENIAPALATLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W +
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQE 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE ALV T+ + + + D + + +G S A+ + ++AVGV
Sbjct: 164 LDEVQALVQLITTTWPQQPYWVSFSIKD--PQTLCDGTSLAATAK--WVAAQPNVVAVGV 219
Query: 541 NCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
NC ++P + LK +PL+VYPNSG++YD
Sbjct: 220 NCTTLENIAPALATLKAAVAVPLIVYPNSGDQYD 253
>gi|302766551|ref|XP_002966696.1| hypothetical protein SELMODRAFT_168384 [Selaginella moellendorffii]
gi|300166116|gb|EFJ32723.1| hypothetical protein SELMODRAFT_168384 [Selaginella moellendorffii]
Length = 327
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 181/403 (44%), Gaps = 100/403 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++QL D+ D PLWS+ L T + + H D+++AGADI++++SYQA++
Sbjct: 20 VLDGGLATQLEHCGADLND--PLWSALCLITRPQLIQKVHWDYLEAGADILVSSSYQATV 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L +++K SV AIA + RD
Sbjct: 78 QGFVS-KGLSEKEGEEMLKKSV-----AIACQV-----------RDKFW----------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
D V+ + + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 110 --------DKVKQNNSSGEIRYNR---------ALVAASIGSYGAYLADGSEYSGQYGPE 152
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
++ A + +HR R+Q L +GAD+LAIETIP EAQ L LL E Q +W+SF+ K
Sbjct: 153 MMNVAKLKGFHRRRLQILASSGADLLAIETIPCQVEAQALVELLEEEDIQIPSWISFNSK 212
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNS 302
D ++ +G+ ++ ++ AVG+NC P + L+ K + P+VVYPNS
Sbjct: 213 DGANVVSGDPLSECVAL--AAKSAKVAAVGINCTPPRFIHGLVSTARKVTDKPIVVYPNS 270
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE P+ K W+ P++G
Sbjct: 271 GETFD---------------------PDAKQWI--------------PSTGVS------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D D YV +W G +L+GGCCRT +K L
Sbjct: 289 --DVDFVS----YVGEWKKAGASLIGGCCRTTPATIRAIKKSL 325
>gi|395769093|ref|ZP_10449608.1| homocysteine methyltransferase [Streptomyces acidiscabies 84-104]
Length = 323
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 173/407 (42%), Gaps = 107/407 (26%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ D LWS+ LA +A+ Q H + AGAD+ +T+SY
Sbjct: 16 AGSLVLDGGMSNQLESAGHDLSD--ELWSARLLAEVPEAITQAHLAYFLAGADVAITSSY 73
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + ++ + + +L+ SV+ +EA + +
Sbjct: 74 QATYEGFAKR-GIERERASELLVQSVELAREAARRAQAADALGT---------------- 116
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
R G+ T R + +A S+GPYGA L DGSEYRG
Sbjct: 117 ----RPGAG---------------------TGTAPRPLYVAASIGPYGAMLADGSEYRGR 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V E +A +HRPRI+ L A D+LA+ET+P + EA+ L ++R AWLS+S
Sbjct: 152 YGLTVPE--LAAFHRPRIETLAAAAPDVLALETVPDTDEAKALLEVVRGL-GTPAWLSYS 208
Query: 242 CKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
+ D+ + E+F A + D++IAVGVNC P
Sbjct: 209 VEGDRTRAGQPLEEAFALAA------DVDEIIAVGVNCCAP------------------- 243
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
G+ A+E + + P+VVYPNSGE +DA
Sbjct: 244 ----GDATRAVE--------------------------IAARVTGKPVVVYPNSGEGWDA 273
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W P + V W G L+GGCCR E + L
Sbjct: 274 NARTWTGSSSFAP--EEVEGWSAAGARLIGGCCRVGPEAIASIAKTL 318
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYDFH 575
D++IAVGVNC P + +E + P+VVYPNSGE +D +
Sbjct: 231 DEIIAVGVNCCAPGDATRAVEIAARVTGKPVVVYPNSGEGWDAN 274
>gi|228478144|ref|ZP_04062752.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius SK126]
gi|340399273|ref|YP_004728298.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
CCHSS3]
gi|228249823|gb|EEK09093.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius SK126]
gi|338743266|emb|CCB93774.1| homocysteine S-methyltransferase 1 (S-methylmethionine:homocysteine
methyltransferase 1) (SMM:Hcy S-methyltransferase 1)
(AtHMT-1) [Streptococcus salivarius CCHSS3]
Length = 316
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 104/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ + DI LWS+ +L + + + H ++ AG+D++ T+SYQA++
Sbjct: 15 ILHGALGTEMESLGYDI--SGKLWSAKYLLDKPEVIQKIHETYVAAGSDLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + Q+I +V K A RD + A+L
Sbjct: 73 PGLID-AGLTEKEAEQIIALTVQLAKNA----------------RDKV--------WATL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D + + Y LI+G VGPY A L +GSEY GDY
Sbjct: 108 DDSEKAKRPYP-----------------------LISGDVGPYAAYLANGSEYTGDY-GR 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
++ + E+HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+ ++
Sbjct: 144 ITIKELKEFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFPEAEAYISFTVQE 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+G S ++ + DQ++A+G+NC PL+ + + LK L+ YPNSGE
Sbjct: 204 PGTISDGTSLDEITQLV--SQSDQILALGINCSSPLLYNQALTILKNAGKALITYPNSGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
VY S + + +
Sbjct: 262 -------------------------------------------VYDGSTQTW-----KPK 273
Query: 365 DRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
D+D V+ + DW D+ GV ++GGCCRT D
Sbjct: 274 DKDALTLVE-HSKDWHDQFGVKILGGCCRTRPND 306
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
IS+G S ++ + DQ++A+G+NC PL+ + + LK L+ YPNSGE YD
Sbjct: 207 ISDGTSLDEITQLV--SQSDQILALGINCSSPLLYNQALTILKNAGKALITYPNSGEVYD 264
>gi|421451947|ref|ZP_15901308.1| Homocysteine S-methyltransferase [Streptococcus salivarius K12]
gi|400182378|gb|EJO16640.1| Homocysteine S-methyltransferase [Streptococcus salivarius K12]
Length = 322
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 176/396 (44%), Gaps = 108/396 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ + DI LWS+ +L + + + H ++ AG+D++ T+SYQA++
Sbjct: 21 ILHGALGTEMESLGYDI--SGKLWSAKYLLDKPEVIQKIHETYVAAGSDLITTSSYQATL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + Q+I +V K ARD +
Sbjct: 79 PGLID-AGLTEKEAEQIIALTVQLAK----------------AARDKV------------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 110 ---------------------WGALDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 148
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ +EA + E+HRPRIQ L+ G D+LA+ETIP EAQ L LL E+P + ++SF+
Sbjct: 149 QITTEA-LKEFHRPRIQILLNQGVDLLALETIPNRLEAQALNELLAEEFPEAEVYISFTV 207
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
++ IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNS
Sbjct: 208 QEPGTISDGTSLDEIAQLV--SQSDQILALGINCSSPLLYNQALAILKNTGKALITYPNS 265
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE VY S + + +
Sbjct: 266 GE-------------------------------------------VYDGSTQTW-----K 277
Query: 363 WIDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
D+D V+ + DW D+ GV ++GGCCRT D
Sbjct: 278 PKDKDALTLVE-HSKDWHDQFGVKILGGCCRTRPND 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L++++ P + I L + VD + + E AL + E +++
Sbjct: 148 GQITTEALKEFHRPRIQIL--LNQGVDLLALETIPNRLEAQALNELLAEEFPEAEVYISF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ + IS+G S ++A+ DQ++A+G+NC PL+ + + LK L+
Sbjct: 206 TVQE--PGTISDGTSLDEIAQLV--SQSDQILALGINCSSPLLYNQALAILKNTGKALIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEVYD 270
>gi|443304838|ref|ZP_21034626.1| homocysteine methyltransferase [Mycobacterium sp. H4Y]
gi|442766402|gb|ELR84396.1| homocysteine methyltransferase [Mycobacterium sp. H4Y]
Length = 309
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 141/300 (47%), Gaps = 63/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 15 LLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A RD GP
Sbjct: 73 EGFAA-RGLDRRETDGLLRRSVELAKAA----------------RD-----EAGP----- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ G +L+A SVGPYGA+L DGSEYRG Y
Sbjct: 106 ---GEFGG-------------------------LLVAASVGPYGAALADGSEYRGRY--G 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S +A WHRPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 136 LSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 193
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 194 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGER 251
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 192 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSG 249
Query: 570 ERYD 573
ER+D
Sbjct: 250 ERWD 253
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 55/148 (37%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS---------------------- 338
++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 154 DAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFAVAAGV 212
Query: 339 ----------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDLCEPVD 373
C +++ P++VYPNSGER+D V R L
Sbjct: 213 DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGERWDGRAWVGPRTFATGL----- 267
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 268 --AAQWVSAGARIVGGCCRVGPVDIAEL 293
>gi|379760975|ref|YP_005347372.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-64]
gi|378808917|gb|AFC53051.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-64]
Length = 295
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 141/300 (47%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 2 LLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A RD AG+VG
Sbjct: 60 EGFAAR-GLDRRETDLLLRRSVELAKAA----------------RDE--AGAVG------ 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+A SVGPYGA+L DGSEYRG Y
Sbjct: 95 ---------------------------------LLVAASVGPYGAALADGSEYRGRY--G 119
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S +A WHRPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 120 LSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 177
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 178 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASKIGKPVIVYPNSGER 235
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 176 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASKIGKPVIVYPNSG 233
Query: 570 ERYD 573
ER+D
Sbjct: 234 ERWD 237
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 57/153 (37%), Gaps = 55/153 (35%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L ++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 133 LETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFA 191
Query: 339 ---------------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDL 368
C +++ P++VYPNSGER+D V R +L
Sbjct: 192 VAAGVDEIVAVGVNCCAPDDVLPAIASASKIGKPVIVYPNSGERWDGRAWVGPRTFATEL 251
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 252 -------AAQWVSAGARIVGGCCRVGPADIAEL 277
>gi|380032189|ref|YP_004889180.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum WCFS1]
gi|342241432|emb|CCC78666.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum WCFS1]
Length = 309
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 165/401 (41%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAVQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV++A +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVTDA-----------------VIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ WP Q W+SFS KD +
Sbjct: 134 PSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S VA P+ ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLA-VAAKWVAAQPN-VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W +
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQE 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE ALV T+ + + + D + + +G S VA P+ ++AVGV
Sbjct: 164 LDEVQALVQLITTTWPQQPYWVSFSIKD--PQTLCDGTSLA-VAAKWVAAQPN-VVAVGV 219
Query: 541 NCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
NC ++P + LK +PL+VYPNSG++YD
Sbjct: 220 NCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYD 253
>gi|356526645|ref|XP_003531927.1| PREDICTED: homocysteine S-methyltransferase 1-like [Glycine max]
Length = 323
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 173/393 (44%), Gaps = 108/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGGF++QL + I D PLWS+ +L + Q H ++++AGADI++T+SYQA++
Sbjct: 18 VTDGGFATQLEKHGASIND--PLWSAIYLIKDPHLIKQVHLEYLEAGADILVTSSYQATL 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + L++ SV +A+EA
Sbjct: 76 PGFSS-KGLSIEEGESLLEKSVK-----LAVEA--------------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITD--DPARDILIAGSVGPYGASLRDGSEYRGDYV 183
RDG W+ I + + R L+A S+G YG+ L DGSEY G Y
Sbjct: 103 RDGF-----------------WNSAIINPGNKYRRALVAASIGSYGSYLADGSEYSGCYG 145
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
V+ + ++HR R+Q LVEAG D+LA ETIP EAQ LL E + +W+ F+
Sbjct: 146 PDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEESVKIPSWICFTT 205
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
D ++ +GESF N ++ AVG+NC P ++ +LI + K ++VYPN
Sbjct: 206 VDGENAPSGESFKDCLEALNKSN--KVDAVGINCAPPHLMENLICKFKQLTKKAIIVYPN 263
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W + K WL C + + ++A
Sbjct: 264 SGE----------------------VWDGKAKKWLPSKC---------FHDDEFGFNA-- 290
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
T W D G ++GGCCRT
Sbjct: 291 ----------------TRWRDLGAKIIGGCCRT 307
>gi|422854197|ref|ZP_16900861.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK160]
gi|325696433|gb|EGD38323.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK160]
Length = 315
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 179/407 (43%), Gaps = 119/407 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + +G + G LWS+ +L + H +++AG+DI+ T+SYQA
Sbjct: 13 IIILDGALGTELES-LGYDVSGK-LWSAQYLLDQPQIIQDMHESYVRAGSDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + Y L+K +V ++A
Sbjct: 71 SIPAFIE-AGLTSEKGYDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY G+
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPCPLVAGSVGPYAAYLADGSEYTGN 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIP-ASKEAQMLCRLLREWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP ++ A +L L E+P +A+LSF
Sbjct: 141 Y--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAALLRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q +AVG NC P +++ L+++L + N P + Y
Sbjct: 199 VAQSENAISDGTKIEELGNLA--QESPQALAVGFNCTAPHLIAPLLDRLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE Y+ +
Sbjct: 257 PNSGE--------------------------------------------------TYNGL 266
Query: 360 NARWID-----RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W D R L E W ++GV L GGCCRT ED +
Sbjct: 267 TKTWHDDPEQERSLLENSKL----WQEQGVRLFGGCCRTRPEDIAQL 309
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q +AVG NC P +++PL+++L + N P + YPNSGE Y+
Sbjct: 224 QALAVGFNCTAPHLIAPLLDRLGQVCNKPFLTYPNSGETYN 264
>gi|329121708|ref|ZP_08250325.1| homocysteine S-methyltransferase [Dialister micraerophilus DSM
19965]
gi|327468178|gb|EGF13664.1| homocysteine S-methyltransferase [Dialister micraerophilus DSM
19965]
Length = 306
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 165/393 (41%), Gaps = 113/393 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG F+S+L ++ D LWS+ L + V + H ++ ++GADI +T SYQA +
Sbjct: 15 VIDGSFASELEKAGLNLCDS--LWSAKALYENPELVTKVHENYFESGADIAITGSYQAHV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G FL + + +++ +K ++ L A A+
Sbjct: 73 QG---FLGKGFTH-----EKAIELIKLSVKL-AKKAK----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ P R + IA +VGPYGA L DGSEY G+Y
Sbjct: 101 ----------------------ENCLKKHPERKLAIAAAVGPYGAYLADGSEYVGNYGLS 138
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + E+H +I++L D A ETIP+ EA+ +L+ + W +FSCKD+
Sbjct: 139 VKE--LEEFHEEKIESLASENPDFFAFETIPSFDEARAYVNILKRHENITGWFTFSCKDE 196
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYPNSGE 304
KHIS G ++VA+ + +Q+ A+GVNC +P + LI E K + + VY N+GE
Sbjct: 197 KHISEGVEISEVAK--FLDKENQVHAIGVNCTKPEYIEPLICEIKKATDKSVAVYSNTGE 254
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+ P K W SGE D
Sbjct: 255 NYD---------------------PVTKTW-----------------SGELAD------- 269
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
KY W + G L+GGCCRT E+
Sbjct: 270 -------FTKYAKRWYESGAKLIGGCCRTLPEE 295
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLI-EQLKTENIPLVVYPNS 568
D+KHIS G ++VA+ + +Q+ A+GVNC +P + PLI E K + + VY N+
Sbjct: 195 DEKHISEGVEISEVAK--FLDKENQVHAIGVNCTKPEYIEPLICEIKKATDKSVAVYSNT 252
Query: 569 GERYD 573
GE YD
Sbjct: 253 GENYD 257
>gi|387874910|ref|YP_006305214.1| homocysteine methyltransferase [Mycobacterium sp. MOTT36Y]
gi|386788368|gb|AFJ34487.1| homocysteine methyltransferase [Mycobacterium sp. MOTT36Y]
Length = 311
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 141/300 (47%), Gaps = 63/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 15 LLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A RD GP
Sbjct: 73 EGFAA-RGLDRRETDLLLRRSVELAKAA----------------RD-----EAGP----- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ G +L+A SVGPYGA+L DGSEYRG Y
Sbjct: 106 ---GEFGG-------------------------LLVAASVGPYGAALADGSEYRGRY--G 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S +A WHRPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 136 LSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 193
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 194 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGER 251
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 192 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSG 249
Query: 570 ERYD 573
ER+D
Sbjct: 250 ERWD 253
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 55/148 (37%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS---------------------- 338
++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 154 DAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFAVAAGV 212
Query: 339 ----------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDLCEPVD 373
C +++ P++VYPNSGER+D V R L
Sbjct: 213 DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGERWDGRAWVGPRTFATGL----- 267
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 268 --AAQWVSAGARIVGGCCRVGPVDIAEL 293
>gi|302792559|ref|XP_002978045.1| hypothetical protein SELMODRAFT_108383 [Selaginella moellendorffii]
gi|300154066|gb|EFJ20702.1| hypothetical protein SELMODRAFT_108383 [Selaginella moellendorffii]
Length = 330
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 180/403 (44%), Gaps = 100/403 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++QL D+ D PLWS+ L T + + H D+++AGADI++++SYQA++
Sbjct: 20 VLDGGLATQLEHCGADLND--PLWSALCLITRPQLIQKVHWDYLEAGADILVSSSYQATV 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L +++K SV AIA + RD
Sbjct: 78 QGFVS-KGLSEKEGEEMLKKSV-----AIACQV-----------RDKFW----------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
D V+ + + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 110 --------DKVKQNNSSGEIRYNR---------ALVAASIGSYGAYLADGSEYSGQYGPE 152
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
++ A + +HR R+Q L +GAD+LAIETIP EAQ L LL E Q +W+SF+ K
Sbjct: 153 MMNVAKLKGFHRRRLQILASSGADLLAIETIPCQVEAQALVELLEEEDIQIPSWISFNSK 212
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNS 302
D ++ +G+ ++ ++ AVG+NC P + L+ K + P+VVYPNS
Sbjct: 213 DGANVVSGDPLSECVAL--AAKSAKVAAVGINCTPPRFIHGLVSTARKVTDKPIVVYPNS 270
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE P+ K W+ P +G
Sbjct: 271 GETFD---------------------PDAKQWI--------------PATGVS------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D D YV +W G +L+GGCCRT +K L
Sbjct: 289 --DVDFVS----YVGEWKKAGASLIGGCCRTTPATIRAIKKSL 325
>gi|225432746|ref|XP_002283054.1| PREDICTED: homocysteine S-methyltransferase 3 isoform 2 [Vitis
vinifera]
Length = 303
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 167/391 (42%), Gaps = 131/391 (33%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L + D + + H D+++AGA I++T SYQA+I
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L + + L++ SV+ IA EA RDI
Sbjct: 82 QGF-EAKGLSREEAEVLLRRSVE-----IACEA-----------RDI------------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
Y E ++ T E R IL+A SVG YGA L DGSEY G Y
Sbjct: 112 ---------YHERCAKGTCLEQ---------RPILVAASVGSYGAYLADGSEYSGHYGAA 153
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+ T+ ++HR R+Q L E+GAD++A ETIP EA++ L E A ++ SCK
Sbjct: 154 VTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEAKVSGDSLIEC----ASIADSCK-- 207
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
Q++AVG+NC P + LI + K P+V+YPNSGE
Sbjct: 208 ----------------------QVVAVGINCTPPRFIHGLILLIQKVTTKPVVIYPNSGE 245
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V W+
Sbjct: 246 --------------------------------------------------TYDGVRKEWV 255
Query: 365 DRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
+ D YV+ W + G +L GGCCRT
Sbjct: 256 KSSGVQDGDFVSYVSKWREAGASLFGGCCRT 286
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG+NC P + LI + K P+V+YPNSGE YD
Sbjct: 208 QVVAVGINCTPPRFIHGLILLIQKVTTKPVVIYPNSGETYD 248
>gi|225423971|ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
gi|297737821|emb|CBI27022.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 175/394 (44%), Gaps = 110/394 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L D + + H ++++AGADI++T+SYQA+I
Sbjct: 20 VVDGGFATQLEIHGATIND--PLWSALCLIKDPDLIKRVHLEYLEAGADILVTSSYQATI 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ + +++E ++L+ SV
Sbjct: 78 PGFLS---------------------KGLSIEEG-----------ELLLERSV------- 98
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R E R + + ++R L+A S+G YGA L DGSEY G Y
Sbjct: 99 RLAVEARDKFWDVTKRVPGHGYNR---------ALVAASIGSYGAYLADGSEYSGCYGPD 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q LV + D+LA ETIP EAQ LL E Q +W+ FS D
Sbjct: 150 MNLDKLKDFHRRRLQVLVRSCPDLLAFETIPNKLEAQACVELLEEENVQIPSWICFSSVD 209
Query: 245 DKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVYP 300
++ +GESF + C ++ ++ AVG+NC P + SLI + K TE P+VVYP
Sbjct: 210 GENAPSGESFKE----CLDIINKSKKVNAVGINCAPPHFLESLICKFKELTEK-PIVVYP 264
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAV 359
NSGE W + K WL C ++
Sbjct: 265 NSGEV----------------------WDGRAKRWLPSKCFGDD---------------- 286
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ Y T W D G L+GGCCRT
Sbjct: 287 -----------KFELYATKWRDLGAKLIGGCCRT 309
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVY 565
D ++ +GESF + C ++ ++ AVG+NC P + LI + K TE P+VVY
Sbjct: 209 DGENAPSGESFKE----CLDIINKSKKVNAVGINCAPPHFLESLICKFKELTEK-PIVVY 263
Query: 566 PNSGERYD 573
PNSGE +D
Sbjct: 264 PNSGEVWD 271
>gi|345009879|ref|YP_004812233.1| homocysteine S-methyltransferase [Streptomyces violaceusniger Tu
4113]
gi|344036228|gb|AEM81953.1| homocysteine S-methyltransferase [Streptomyces violaceusniger Tu
4113]
Length = 329
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 161/394 (40%), Gaps = 97/394 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + H + +AGA +++T+SYQA+
Sbjct: 18 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPGQIEAAHTAYARAGARVLITSSYQATY 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + ++ + L++ SV+ + AT D A D + G
Sbjct: 76 EGFA-HRGVGHEQATALLRRSVELARTGAERAATERATARDQAAGDRAVGGD-------- 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D A + +A SVGPYGA L DGSEYRG Y
Sbjct: 127 -----------------------RAADDRAAEPVWVAASVGPYGAMLADGSEYRGRYGLS 163
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPRI+AL AG D+LA+ET+P + EA L + E WLS+S +
Sbjct: 164 VAE--LVRFHRPRIEALAAAGPDVLALETVPDADEAAALLSAV-EGCGVPVWLSYSIAGE 220
Query: 246 KHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNS 302
+ Q R + + DQ+IAVGVNC P +E P+VVYPNS
Sbjct: 221 TTRAG-----QPLREAFALAAGVDQVIAVGVNCCEPGDADRAVEIAADITGKPVVVYPNS 275
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE EW DA
Sbjct: 276 GE----------------------EW----------------------------DATARS 285
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W R +P V W D G L+GGCCR E
Sbjct: 286 WRGRATFDP--GRVKAWRDAGARLIGGCCRVGPE 317
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
DQ+IAVGVNC P +E P+VVYPNSGE +D
Sbjct: 239 DQVIAVGVNCCEPGDADRAVEIAADITGKPVVVYPNSGEEWD 280
>gi|406029911|ref|YP_006728802.1| Homocysteine S-methyltransferase [Mycobacterium indicus pranii MTCC
9506]
gi|405128458|gb|AFS13713.1| Homocysteine S-methyltransferase [Mycobacterium indicus pranii MTCC
9506]
Length = 295
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 165/399 (41%), Gaps = 126/399 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 2 LLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A RD AG+VG
Sbjct: 60 EGFAAR-GLDRRETDLLLRRSVELAKAA----------------RDE--AGAVG------ 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+A SVGPYGA+L DGSEYRG Y
Sbjct: 95 ---------------------------------LLVAASVGPYGAALADGSEYRGRY--G 119
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S +A WHRPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 120 LSVGALARWHRPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 177
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P
Sbjct: 178 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAP-------------------------- 209
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA---VNAR 362
+ +PA A + + P++VYPNSGER+D V R
Sbjct: 210 ---DDQLPAIASASKIGK---------------------PVIVYPNSGERWDGRAWVGPR 245
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+L W+ G +VGGCCR D +
Sbjct: 246 TFATEL-------AAQWVSAGARIVGGCCRVGPADIAEL 277
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P P I P++VYPNSG
Sbjct: 176 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDQLPAIASASKIGKPVIVYPNSG 233
Query: 570 ERYD 573
ER+D
Sbjct: 234 ERWD 237
>gi|339637099|emb|CCC15976.1| homocysteine methyltransferase [Lactobacillus pentosus IG1]
Length = 304
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 159/392 (40%), Gaps = 116/392 (29%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + A+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPAAIQAVHQSYLDAGAQIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + + QLI+ +V +A RD
Sbjct: 74 F-EQAGIPAEQARQLIQKAVTVAHDA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S G +IAGS+GPYGA L DGSEY GDY +S
Sbjct: 101 ASAATG-------------------------AVIAGSIGPYGAYLADGSEYTGDY--QLS 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
A +H+ R++ +++AG D+LA+ET+P E Q L L+ WP Q W+SFS +D +
Sbjct: 134 PAAYQAFHQERLELMIDAGVDVLALETMPRLDEVQALVDLVTTRWPDQPYWVSFSIRDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S A+ + ++AVGVNC + ++ L+ +PL+VYPNSG
Sbjct: 194 RLCDGTSLATAAQ--WVAAQPNVVAVGVNCTALENIEPALKTLRAAVTMPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQP 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL +V WL G ++GGCCRT D
Sbjct: 262 TDLSHQFASFVPKWLAAGAQIIGGCCRTTPAD 293
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + + +G S A+ + ++AVGVNC + P ++ L+ +PL+VYPNS
Sbjct: 191 DPQRLCDGTSLATAAQ--WVAAQPNVVAVGVNCTALENIEPALKTLRAAVTMPLIVYPNS 248
Query: 569 GERYD 573
G++YD
Sbjct: 249 GDQYD 253
>gi|312863919|ref|ZP_07724157.1| homocysteine S-methyltransferase [Streptococcus vestibularis F0396]
gi|311101455|gb|EFQ59660.1| homocysteine S-methyltransferase [Streptococcus vestibularis F0396]
Length = 316
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 149/302 (49%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H +I AGAD++ T+SYQA++
Sbjct: 15 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKPEIIQEIHETYIAAGADLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V K ARD +
Sbjct: 73 PGLVE-AGLTEKAAEQIIALTVRLAK----------------AARDKV------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 104 ---------------------WVVLDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 142
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ E + ++HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 143 QITIE-ELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTV 201
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
++ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 202 QEPGTISDGTSLDEIAKLVSQSN--QILAVGINCSSPLLYNQALAILKNAGKVLITYPNS 259
Query: 303 GE 304
GE
Sbjct: 260 GE 261
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 51/162 (31%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
IE+LK + P + + + G +LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 146 IEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTVQEPG 205
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 206 TISDGTSLDEIAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVLITYPNSGEVYDG 265
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
+ W D+D V+ + DW GV ++GGCCRT D
Sbjct: 266 NSQTWKTKDKDALTLVE-HSKDWHAHFGVKILGGCCRTRPND 306
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L+D++ P + I D + VD + + E AL+ + E ++
Sbjct: 142 GQITIEELKDFHRPRIQILLD--QGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISF 199
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ + IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 200 TVQE--PGTISDGTSLDEIAKLVSQSN--QILAVGINCSSPLLYNQALAILKNAGKVLIT 255
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 256 YPNSGEVYD 264
>gi|388491598|gb|AFK33865.1| unknown [Lotus japonicus]
Length = 328
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 167/391 (42%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGGF++QL + D PLWS+ L + + H ++++AGA+I++T+SYQA++
Sbjct: 23 VTDGGFATQLEKHGASFTD--PLWSAVCLIKDPHLIKKVHLEYLEAGANILVTSSYQATL 80
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L+K SV E ARD + S
Sbjct: 81 PGFLA-RGLSIEEGEMLLKRSVKLAVE----------------ARDSF-------WNFSK 116
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R+ S + R L+A S+G YGA L DGSEYRG Y
Sbjct: 117 RNPS------------------------NKYRQALVAASIGSYGAYLADGSEYRGLYGPD 152
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ + ++HR R+Q LVE G D+LA ETIP EAQ L LL E Q +W+ F+ D
Sbjct: 153 VTLEKLKDFHRRRLQVLVETGPDLLAFETIPNKIEAQALVELLEEENVQIPSWICFTSVD 212
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
++ + ESF D++ AVG+NC P + +LI + K ++VYPNSG
Sbjct: 213 GENAPSRESFKDCLEAIN--KSDKVGAVGINCAPPHFMENLICKFKQLTKKAIIVYPNSG 270
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C
Sbjct: 271 E----------------------VWDGRAKKWLPSKC----------------------- 285
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ D D + T W D G ++GGCCRT
Sbjct: 286 FHDEDF----GFHATRWRDLGAKIIGGCCRT 312
>gi|417005632|ref|ZP_11944225.1| homocysteine methyltransferase [Streptococcus agalactiae FSL
S3-026]
gi|341577445|gb|EGS27853.1| homocysteine methyltransferase [Streptococcus agalactiae FSL
S3-026]
Length = 314
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H +I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEGYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 73 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 100 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G D+LA+ETIP+++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIDKEGLKNFHRHRIELLLDEGVDLLALETIPSAQEAEALIELLAEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 201 QDGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------VYDGASQ 268
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 313
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 202 DGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEVYD 264
>gi|312865237|ref|ZP_07725465.1| homocysteine S-methyltransferase [Streptococcus downei F0415]
gi|311099348|gb|EFQ57564.1| homocysteine S-methyltransferase [Streptococcus downei F0415]
Length = 315
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 172/395 (43%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L Y G + G LWS+ +L A+ H +++AG+DIV T SYQA++
Sbjct: 15 ILHGALGTELE-YRGYDVSGK-LWSAKYLLEDPKAIQDIHETYLRAGSDIVTTASYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L + ++I S+VD K ARD + +
Sbjct: 73 PG-LESYGLTEAQAKKIIASTVDIAKS----------------ARDQVWS---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+++E + P LI+G VGPY A L DGSEY GDY
Sbjct: 106 -----------------SLSEIEKESRPYP----LISGDVGPYAAYLADGSEYTGDY-GA 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+++ + ++HRPR+ L E G D+LA+ET+P EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ITKQELKDFHRPRLAILKEQGVDLLALETMPNFLEAQALVELLSEDFPQVEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSG 303
+ IS+G + ++VA+ + Q++AVG+NC P + + QL+ PLV YPNSG
Sbjct: 204 GQSISDGTALSEVAKLVEASS--QILAVGLNCSSPKVYPDFLHQLRQYTAKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 262 E--------------------------------------------------VYDGATQTW 271
Query: 364 I-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D D + + W G +VGGCCRT D
Sbjct: 272 TKDPDHSHSLLENTLTWQKLGAKVVGGCCRTRPSD 306
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G+ T L+D++ P L I ++ + VD + + E ALV + + ++
Sbjct: 142 GAITKQELKDFHRPRLAILKE--QGVDLLALETMPNFLEAQALVELLSEDFPQVEAYIS- 198
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLV 563
D + IS+G + ++VA+ + Q++AVG+NC P + + QL+ PLV
Sbjct: 199 -FTSQDGQSISDGTALSEVAKLVEASS--QILAVGLNCSSPKVYPDFLHQLRQYTAKPLV 255
Query: 564 VYPNSGERYD 573
YPNSGE YD
Sbjct: 256 TYPNSGEVYD 265
>gi|258654689|ref|YP_003203845.1| homocysteine methyltransferase [Nakamurella multipartita DSM 44233]
gi|258557914|gb|ACV80856.1| homocysteine S-methyltransferase [Nakamurella multipartita DSM
44233]
Length = 320
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L + D+ LWS+ L A+ HR++ +AGA + +T SYQAS+
Sbjct: 17 VLDGGLATLLEAHGHDLTSA--LWSAQLLVQNPGAITAAHREYFRAGAQVAITASYQASL 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + L + Q ++ SVD + A A
Sbjct: 75 PG-LAAIGLGRVEAEQALRRSVDLARTAAA------------------------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG E + + W +A SVGPYGA+L DGSEYRGDY
Sbjct: 104 -DGVN------EATAPGSGPRW-------------VATSVGPYGAALADGSEYRGDYGLT 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V + + +WHRPR++ L +AG D+LAIETIP + E + L ++ AWLS +C+D
Sbjct: 144 VRQ--LRDWHRPRLEILADAGGDVLAIETIPCAAEVEALLTEIQAL-DAPAWLSLTCQDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPNSGE 304
+ GE +V + DQ+IAVGVNCV + + P VVYPNSGE
Sbjct: 201 R-TRAGERVDEVFAMAAGV--DQVIAVGVNCVESAEAADLVAAAAENSGKPAVVYPNSGE 257
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+DA W
Sbjct: 258 D--------------------------------------------------WDAQARAWA 267
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYV 416
R P ++ W+ G LVGGCCR + + W +G V
Sbjct: 268 GRATFGP--EHAAVWVASGARLVGGCCRVGPQAIRRLARSAPGWPAGTPGSV 317
>gi|322517183|ref|ZP_08070066.1| homocysteine S-methyltransferase [Streptococcus vestibularis ATCC
49124]
gi|322124242|gb|EFX95758.1| homocysteine S-methyltransferase [Streptococcus vestibularis ATCC
49124]
Length = 322
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H +I AGAD++ T+SYQA++
Sbjct: 21 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKPEIIQEIHETYIAAGADLITTSSYQATL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V R ARD +
Sbjct: 79 PGLVE-AGLTEKAAEQIIALTV----------------RLAKAARDKV------------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 110 ---------------------WVVLDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 148
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ + ++HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 149 Q-ITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTV 207
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
++ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 208 QEPGTISDGTSLDEIAKLVSQSN--QILAVGINCSSPLLYNQALAILKNAGKVLITYPNS 265
Query: 303 GE 304
GE
Sbjct: 266 GE 267
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 51/162 (31%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
IE+LK + P + + + G +LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 152 IEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISFTVQEPG 211
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 212 TISDGTSLDEIAKLVSQSNQILAVGINCSSPLLYNQALAILKNAGKVLITYPNSGEVYDG 271
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
+ W D+D V+ + DW GV ++GGCCRT D
Sbjct: 272 NSQTWKTKDKDALTLVE-HSKDWHAHFGVKILGGCCRTRPND 312
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L+D++ P + I D + VD + + E AL+ + E ++
Sbjct: 148 GQITIEELKDFHRPRIQILLD--QGVDLLALETIPNRLEAQALIELLAEEFPEAEAYISF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ + IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 206 TVQE--PGTISDGTSLDEIAKLVSQSN--QILAVGINCSSPLLYNQALAILKNAGKVLIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEVYD 270
>gi|334882852|emb|CCB83938.1| homocysteine S-methyltransferase [Lactobacillus pentosus MP-10]
Length = 304
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 158/392 (40%), Gaps = 116/392 (29%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + A+ H+ ++ AGA I+ TN+YQ ++
Sbjct: 16 DGAMATELEKR--GVETNSALWSATAMLDHPAAIQAVHQSYLDAGAQIMTTNTYQTNVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + + QLI+ +V +A RD
Sbjct: 74 F-EQAGIPAEQARQLIQKAVTVAHDA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S G +IAGS+GPYGA L DGSEY GDY +S
Sbjct: 101 ASAATG-------------------------AVIAGSIGPYGAYLADGSEYTGDY--QLS 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
A +H+ R++ +++AG D+LA+ET+P E Q L L+ +WP Q W+SFS +D +
Sbjct: 134 PAAYQAFHQERLELMIDAGVDVLALETMPRLDEVQALVDLVTTQWPKQPYWVSFSIRDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S A+ + ++AVGVNC + + L+ IPL+VYPNSG
Sbjct: 194 RLCDGTSLATAAQ--WVAAQPNVVAVGVNCTALENIEPALATLRAAVTIPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQP 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL +V WL G ++GGCCRT D
Sbjct: 262 TDLSHQFASFVPKWLAAGAQIIGGCCRTTPAD 293
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + + +G S A+ + ++AVGVNC + P + L+ IPL+VYPNS
Sbjct: 191 DPQRLCDGTSLATAAQ--WVAAQPNVVAVGVNCTALENIEPALATLRAAVTIPLIVYPNS 248
Query: 569 GERYD 573
G++YD
Sbjct: 249 GDQYD 253
>gi|157877843|ref|XP_001687219.1| putative homocysteine S-methyltransferase [Leishmania major strain
Friedlin]
gi|68130294|emb|CAJ09606.1| putative homocysteine S-methyltransferase [Leishmania major strain
Friedlin]
Length = 339
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 161/346 (46%), Gaps = 68/346 (19%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DGG +++L T D+ D PLWS L + + +++AGA ++T SYQ
Sbjct: 30 VVMLDGGLATELETRGCDLRD--PLWSGKVLLESPQQLQNVALAYLRAGARCIITASYQI 87
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ ME L D++ I+ SV R AR+
Sbjct: 88 TPQSLMEHRRLTEDAAVAAIEESV----------------RIAQSARE------------ 119
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
H+ E A I +AGSVGPYGA L DGSEYRGDYV
Sbjct: 120 -------------RHLREKPQAA-----------PIFVAGSVGPYGAYLADGSEYRGDYV 155
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242
E E+HR RI AL+ AGAD+LAIET P++ E + + LL+ E P+ +AW+SF+
Sbjct: 156 RSAEE--FKEFHRLRIAALLRAGADVLAIETQPSAAEVRAIVALLQEEHPNCRAWVSFTT 213
Query: 243 ---KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVV 298
+ IS+G + + + Q++AVGVNC+ S+++ L T +PLVV
Sbjct: 214 SRISPVEAISDGTKWADI--ISFLEKAPQIVAVGVNCIPMAEASAVLAHLHTLTTMPLVV 271
Query: 299 YPNSGEHILAI----ETIPASKEAQM-LCRLLREWPNQKAWLSFSC 339
Y NSGE A+ I S + L L REW + A L C
Sbjct: 272 YTNSGESYDAVTRTWHPISMSDGTTLSLGALAREWASHGARLVGGC 317
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 57/151 (37%), Gaps = 54/151 (35%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCK------------------- 340
+G +LAIET P++ E + + LL+E PN +AW+SF+
Sbjct: 174 RAGADVLAIETQPSAAEVRAIVALLQEEHPNCRAWVSFTTSRISPVEAISDGTKWADIIS 233
Query: 341 ------------------------------TENIPLVVYPNSGERYDAVNARWIDRDLCE 370
+PLVVY NSGE YDAV W + +
Sbjct: 234 FLEKAPQIVAVGVNCIPMAEASAVLAHLHTLTTMPLVVYTNSGESYDAVTRTWHPISMSD 293
Query: 371 ----PVDKYVTDWLDEGVALVGGCCRTYAED 397
+ +W G LVGGCCRT D
Sbjct: 294 GTTLSLGALAREWASHGARLVGGCCRTGPSD 324
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
Q++AVGVNC+ S ++ L T +PLVVY NSGE YD
Sbjct: 240 QIVAVGVNCIPMAEASAVLAHLHTLTTMPLVVYTNSGESYD 280
>gi|448820840|ref|YP_007414002.1| Homocysteine S-methyltransferase (Cobalamin-dependent)
[Lactobacillus plantarum ZJ316]
gi|448274337|gb|AGE38856.1| Homocysteine S-methyltransferase (Cobalamin-dependent)
[Lactobacillus plantarum ZJ316]
Length = 309
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 163/401 (40%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAAQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV+ A +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVTNA-----------------VIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ WP Q W+SFS KD +
Sbjct: 134 LSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S VA P+ ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLA-VAAKWVAAQPN-VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQA 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE ALV T+ + + + D + + +G S VA P+ ++AVGV
Sbjct: 164 LDEVQALVQLITTTWPQQPYWVSFSIKD--PQTLCDGTSLA-VAAKWVAAQPN-VVAVGV 219
Query: 541 NCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
NC ++P + LK +PL+VYPNSG++YD
Sbjct: 220 NCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYD 253
>gi|422878927|ref|ZP_16925393.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1059]
gi|422928773|ref|ZP_16961715.1| homocysteine S-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931747|ref|ZP_16964678.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK340]
gi|332366629|gb|EGJ44372.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK1059]
gi|339616041|gb|EGQ20699.1| homocysteine S-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339619479|gb|EGQ24058.1| homocysteine S-methyltransferase [Streptococcus sanguinis SK340]
Length = 315
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 182/408 (44%), Gaps = 109/408 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG ++L + +G + G LWS+ +L + H +++AG DI+ T+SYQA
Sbjct: 13 IIILDGALGTELES-LGYDVSGK-LWSAQYLLDQPQIIQDVHESYVRAGIDIITTSSYQA 70
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
SI F+E L + + L+K +V ++A
Sbjct: 71 SIPAFIE-AGLTPEKACDLLKETVFLAQKA------------------------------ 99
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGD 181
+E+V W L ++ + L+AGSVGPY A L DGSEY G+
Sbjct: 100 ------------IENV-------WTGLSPEEQKQRPCPLVAGSVGPYAAYLADGSEYTGN 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIP-ASKEAQMLCRLLREWPHQKAWLSF 240
Y +SE ++HRPRIQAL+EAG+D+LAIETIP ++ A +L L E+P +A+LSF
Sbjct: 141 Y--QLSEEEYRDFHRPRIQALLEAGSDLLAIETIPNGAEAAALLRLLAEEFPQAEAYLSF 198
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVY 299
+ + IS+G ++ Q++AVG NC P +++ L++ L + N P + Y
Sbjct: 199 VAQSETAISDGTKIEELGNLA--QKSPQVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTY 256
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE L + + P Q+ L EN L
Sbjct: 257 PNSGETY------------NGLTKTWHDNPEQERSL-----LENSKL------------- 286
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W ++GV L GGCCRT ED + L D
Sbjct: 287 -------------------WKEQGVRLFGGCCRTRPEDIAQLAKGLKD 315
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q++AVG NC P +++PL++ L + N P + YPNSGE Y+
Sbjct: 224 QVLAVGFNCTAPHLIAPLLDGLGQVCNKPFLTYPNSGETYN 264
>gi|377830886|ref|ZP_09813877.1| homocysteine methyltransferase [Lactobacillus mucosae LM1]
gi|377555334|gb|EHT17022.1| homocysteine methyltransferase [Lactobacillus mucosae LM1]
Length = 305
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 161/334 (48%), Gaps = 70/334 (20%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+N +IDG S+ L D + LW++ L + V Q H+++ +AGA + +T++
Sbjct: 7 FSNPLVIDGSMSTSLERLGCDT--DNELWTAAALINQPELVYQVHKEYFEAGARLAITDT 64
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSD---DPARDILIAGS 117
YQA++ + L + Q+I+ +V+ K+A R D + +AGS
Sbjct: 65 YQANLPALKK-AGLTEKQARQVIEKAVELAKQA----------RDDYEIETGAHGYVAGS 113
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
+GPYGA L +GSEYRGDY E T AE+
Sbjct: 114 LGPYGAYLANGSEYRGDY-----ELTSAEYQ----------------------------- 139
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKA 236
E++RPR++A+V AG D LA+ET P E + + LL+ E+P QK
Sbjct: 140 ---------------EFYRPRLEAIVNAGVDCLALETQPKLSEVKAVLDLLKNEYPDQKV 184
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IP 295
++SF+ ++ + IS G A+ DQ+I VGVNC+ P +V+ I++LK +P
Sbjct: 185 YVSFTLQNAETISEGTKLADAAKAVAQY--DQVIGVGVNCIPPRLVTPAIKKLKEATALP 242
Query: 296 LVVYPNSGEHILA-IETIPASKEAQMLCRLLREW 328
++VYPNSG A +T A+ +L +EW
Sbjct: 243 IIVYPNSGASYDATTKTWSAAPAEDDFGKLTKEW 276
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 59/257 (22%)
Query: 204 EAGADILAIET----IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVAR 259
EAGA + +T +PA K+A + + R+ + L+ +DD I G
Sbjct: 54 EAGARLAITDTYQANLPALKKAGLTEKQARQVIEKAVELAKQARDDYEIETGAH----GY 109
Query: 260 TCYNMNPDQLIAVGVNCVRP--LMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKE 317
++ P + R + S+ ++ + +V N+G LA+ET P E
Sbjct: 110 VAGSLGPYGAYLANGSEYRGDYELTSAEYQEFYRPRLEAIV--NAGVDCLALETQPKLSE 167
Query: 318 AQMLCRLLR-EWPNQKAWLSFSCKTEN--------------------------------- 343
+ + LL+ E+P+QK ++SF+ +
Sbjct: 168 VKAVLDLLKNEYPDQKVYVSFTLQNAETISEGTKLADAAKAVAQYDQVIGVGVNCIPPRL 227
Query: 344 -------------IPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGC 390
+P++VYPNSG YDA W + K +WL G + +GGC
Sbjct: 228 VTPAIKKLKEATALPIIVYPNSGASYDATTKTWSAAPAEDDFGKLTKEWLLAGASAIGGC 287
Query: 391 CRTYAEDTLHMKHRLDD 407
C T D + L+D
Sbjct: 288 CTTTPADIAKIAAVLND 304
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNSGERY 572
IS G A+ DQ+I VGVNC+ P +V+P I++LK +P++VYPNSG Y
Sbjct: 196 ISEGTKLADAAKAVAQY--DQVIGVGVNCIPPRLVTPAIKKLKEATALPIIVYPNSGASY 253
Query: 573 D 573
D
Sbjct: 254 D 254
>gi|332525627|ref|ZP_08401782.1| homocysteine methyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332109192|gb|EGJ10115.1| homocysteine methyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 310
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 171/405 (42%), Gaps = 108/405 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ ++DG +++L D+ D PLWS+ L + + + H D+ +AGAD+ T SYQ
Sbjct: 10 DIVVLDGALATELERRGADLKD--PLWSARLLIERPELIREVHLDYFRAGADVATTASYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF +D + L++ SV A+A+EA
Sbjct: 68 ATFEGFAR-RGFSHDEAVALMRRSV-----ALAIEA------------------------ 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD A W R L+A SVGPYGA L DGSEYRG
Sbjct: 98 ---RD-----------------AFWAEPANRAGRRRPLVAASVGPYGAMLADGSEYRG-- 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFS 241
V+ +A +HRPR++ L AGAD+LA ETIP EA + LL P AW+SFS
Sbjct: 136 YPGVTREQLAAFHRPRLEVLAAAGADLLACETIPCLDEALAIASLLPTLQPALPAWISFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYP 300
C+D +H+S GE F A + + AVG+NC P V +LI + +P+VVYP
Sbjct: 196 CRDGEHVSQGERFADCAAALDGL--PGVAAVGLNCTAPEYVPALIAAAQARTRLPIVVYP 253
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE A+ W ++ F+ + E
Sbjct: 254 NSGEQWDAVAKC---------------WHGERDAADFAAQAER----------------- 281
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W G L+GGCCRT ++ ++ L
Sbjct: 282 ------------------WRRGGARLIGGCCRTGPDEIRALRAAL 308
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D +H+S GE F A + + AVG+NC P V LI + +P+VVYPNS
Sbjct: 198 DGEHVSQGERFADCAAALDGL--PGVAAVGLNCTAPEYVPALIAAAQARTRLPIVVYPNS 255
Query: 569 GERYD 573
GE++D
Sbjct: 256 GEQWD 260
>gi|257057675|ref|YP_003135507.1| homocysteine methyltransferase [Saccharomonospora viridis DSM
43017]
gi|256587547|gb|ACU98680.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
viridis DSM 43017]
Length = 295
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 162/392 (41%), Gaps = 119/392 (30%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGG +++L D+ G LWS+ L A D +V HR F +AGA I T SYQAS G
Sbjct: 13 DGGLATELEARGHDL--GDALWSARLLLDAPDEIVAVHRAFYEAGAVIATTASYQASFSG 70
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E +D D++ L++ SV+ + R R + P
Sbjct: 71 FAE-RGIDRDTATTLLRRSVELAR----------RARDEAP------------------- 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
D R +A SVGPYGA+L DGSEYRG Y +S
Sbjct: 101 --------------------------DDGRRRFVAASVGPYGAALADGSEYRGRY--GLS 132
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
A + WHRPR++ L E DILA+ET+P EA+ L + AWL+++ D +
Sbjct: 133 VARLRRWHRPRLEVLAETSPDILALETVPDIDEAEALVEAVAGL-GVPAWLTYTV-DGER 190
Query: 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSGEHI 306
G+ T+ A +PD ++AVGVNC P VS+ + + PLVVYPNSGE+
Sbjct: 191 TRAGQPLTE-AFAVAQSSPD-IVAVGVNCCTPDDVSTALALAREVTTKPLVVYPNSGEN- 247
Query: 307 LAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
W P ++ W S RY AR
Sbjct: 248 ---------------------WDPVRRTWWGPS----------------RYSPELAR--- 267
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W EG +VGGCCR D
Sbjct: 268 ------------RWTAEGAHVVGGCCRVGPAD 287
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS---PLIEQLKTENIPLVVYP 566
D + G+ T+ A +PD ++AVGVNC P VS L ++ T+ PLVVYP
Sbjct: 187 DGERTRAGQPLTE-AFAVAQSSPD-IVAVGVNCCTPDDVSTALALAREVTTK--PLVVYP 242
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 243 NSGENWD 249
>gi|25011419|ref|NP_735814.1| homocysteine methyltransferase [Streptococcus agalactiae NEM316]
gi|24412957|emb|CAD47036.1| unknown [Streptococcus agalactiae NEM316]
Length = 314
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS +L A+ H D+I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRGCDV--SGKLWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A ++
Sbjct: 73 QGLAQ-VGVSESQAEDLIRLTVQLAK------AVREQV---------------------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 104 ---------------------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G D+LA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLVEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPN
Sbjct: 201 QDGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------IYDGASQ 268
Query: 362 RW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W RD + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSRDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSEHL 313
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPNS
Sbjct: 202 DGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEIYD 264
>gi|357637374|ref|ZP_09135249.1| homocysteine S-methyltransferase [Streptococcus macacae NCTC 11558]
gi|357585828|gb|EHJ53031.1| homocysteine S-methyltransferase [Streptococcus macacae NCTC 11558]
Length = 323
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 57/305 (18%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++ G ++L ++G + G LWS+ +L + H ++KAG+DI+ ++SYQ
Sbjct: 12 NYLILHGALGTELE-FLGYDVSGK-LWSAKYLLKDPQLIQDIHETYLKAGSDIITSSSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ G ++ LDY+ + +I +V K+ AR+ + +
Sbjct: 70 ASVLGLCDY-GLDYEEALNVIALTVQLAKK----------------ARENVWS------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
T+ E + P LI+G VGPY A L DGSEY G+Y
Sbjct: 106 --------------------TLTEKEKKARPYP----LISGDVGPYAAYLADGSEYSGNY 141
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
+S+ T+ ++HRPR+ LV+ D+LA+ETIP E Q L LL+ E+P +A++SF+
Sbjct: 142 -GSISKETLKDFHRPRLAVLVDEECDLLALETIPNYLEVQALSELLQEEFPAVEAYISFT 200
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--TENIPLVVY 299
+ IS+G + +VA+ + +P Q++A+G+NC PL+ SL++++ TE PLV Y
Sbjct: 201 AQTKDSISDGTAIEKVAQLV-DRSP-QILALGINCSSPLIYKSLLQKIAAITEK-PLVTY 257
Query: 300 PNSGE 304
PNSGE
Sbjct: 258 PNSGE 262
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 48/148 (32%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTENI-------------------- 344
+LA+ETIP E Q L LL+E +P +A++SF+ +T++
Sbjct: 167 LLALETIPNYLEVQALSELLQEEFPAVEAYISFTAQTKDSISDGTAIEKVAQLVDRSPQI 226
Query: 345 --------------------------PLVVYPNSGERYDAVNARWIDRDLCE-PVDKYVT 377
PLV YPNSGE YD + W + +
Sbjct: 227 LALGINCSSPLIYKSLLQKIAAITEKPLVTYPNSGEIYDGKHQNWTKAAASSGSLLENTL 286
Query: 378 DWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W G ++GGCCRT D ++ L
Sbjct: 287 TWYKLGAKILGGCCRTRPADIKNLNQGL 314
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK--TENIPLVVYPNSGER 571
IS+G + +VA+ + +P Q++A+G+NC PL+ L++++ TE PLV YPNSGE
Sbjct: 207 ISDGTAIEKVAQLV-DRSP-QILALGINCSSPLIYKSLLQKIAAITEK-PLVTYPNSGEI 263
Query: 572 YD 573
YD
Sbjct: 264 YD 265
>gi|418274810|ref|ZP_12890308.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum subsp. plantarum NC8]
gi|376010376|gb|EHS83702.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus plantarum subsp. plantarum NC8]
Length = 309
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 165/401 (41%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAAQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV++A +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVTDA-----------------VIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ WP Q W+SFS KD +
Sbjct: 134 PSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S A+ P+ ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLAAAAKW-VAAQPN-VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W +
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQE 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
++AVGVNC ++P + LK +PL+VYPNSG++YD
Sbjct: 214 VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYD 253
>gi|359477546|ref|XP_003631993.1| PREDICTED: homocysteine S-methyltransferase 3 [Vitis vinifera]
Length = 310
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 170/391 (43%), Gaps = 124/391 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L + D + + H D+++AGA I++T SYQA+I
Sbjct: 24 VIDGGLATELERHGADLND--PLWSATCLIHSPDLIRRVHLDYLEAGASIIITASYQATI 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L + + L++ SV+ IA EA RDI
Sbjct: 82 QGF-EAKGLSREEAEVLLRRSVE-----IACEA-----------RDI------------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
Y E ++ T E R IL+A SVG YGA L DGSEY G Y
Sbjct: 112 ---------YHERCAKGTCLE---------QRPILVAASVGSYGAYLADGSEYSGHYGAA 153
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ T+ ++HR R+Q L E+GAD++A ETIP EA+ LL E + AW SF+ D
Sbjct: 154 VTLETLKDFHRRRVQVLAESGADLIAFETIPNKLEAKAYAELLDEENIKIPAWFSFTSLD 213
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
++ +G+S + A ++ +C + + V++ P+V+YPNSGE
Sbjct: 214 GINVVSGDSLIECA------------SIADSCKQVVAVTTK---------PVVIYPNSGE 252
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD V W+
Sbjct: 253 --------------------------------------------------TYDGVRKEWV 262
Query: 365 DRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
+ D YV+ W + G +L GGCCRT
Sbjct: 263 KSSGVQDGDFVSYVSKWREAGASLFGGCCRT 293
>gi|425735249|ref|ZP_18853564.1| homocysteine methyltransferase [Brevibacterium casei S18]
gi|425480177|gb|EKU47346.1| homocysteine methyltransferase [Brevibacterium casei S18]
Length = 318
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 169/405 (41%), Gaps = 117/405 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGG + L + G ++D H LWS+ L D + + H F +AGADIV T SYQ
Sbjct: 20 VTDGGLGTALESR-GIVLD-HDLWSAGLLRDDPDTLAEVHAAFARAGADIVTTASYQIGP 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+ L + +L SV +EA S A +LIAGSVGP+GA L
Sbjct: 78 RAGLTDTGLTDTAVRRLCADSVTLAREAA----------SRGTAAPVLIAGSVGPFGAVL 127
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY GDY +++A A +H
Sbjct: 128 GDGSEYTGDYA--LTDAEFAAFH------------------------------------- 148
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPRI+AL EAGAD++A+ET P E ++L L+ E AWLS + D
Sbjct: 149 ----------RPRIEALAEAGADVIALETQPNLPEIRVLADLV-EGTRVPAWLSVTLADG 197
Query: 246 -----KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
+ +G T +A +P + AVGVNCVRP VS +E L ++PL+ Y
Sbjct: 198 GPTGVPRLPDGTPLTALAEVAA-AHP-TVRAVGVNCVRPAQVSPALEALAAVSDLPLIAY 255
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE + +A+ + W + A +GER A
Sbjct: 256 PNSGE----------TYDAESMT-----WQDPTA-----------------EAGERLGA- 282
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W V DW+ G +VGGCCRT D + R
Sbjct: 283 ---W-----------PVADWIARGARIVGGCCRTTPADIAELVLR 313
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
AVGVNCVRP VSP +E L ++PL+ YPNSGE YD
Sbjct: 226 AVGVNCVRPAQVSPALEALAAVSDLPLIAYPNSGETYD 263
>gi|76787540|ref|YP_329947.1| homocysteine methyltransferase [Streptococcus agalactiae A909]
gi|406709698|ref|YP_006764424.1| homocysteine methyltransferase [Streptococcus agalactiae
GD201008-001]
gi|424049239|ref|ZP_17786790.1| homocysteine methyltransferase [Streptococcus agalactiae ZQ0910]
gi|76562597|gb|ABA45181.1| homocysteine S-methyltransferase [Streptococcus agalactiae A909]
gi|389649439|gb|EIM70921.1| homocysteine methyltransferase [Streptococcus agalactiae ZQ0910]
gi|406650583|gb|AFS45984.1| homocysteine methyltransferase [Streptococcus agalactiae
GD201008-001]
Length = 314
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS +L A+ H D+I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRDCDV--SGKLWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A ++
Sbjct: 73 QGLAQ-VGVSESQAEDLIRLTVQLAK------AVREQV---------------------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 104 ---------------------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G D+LA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLVEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPN
Sbjct: 201 QDGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------IYDGASQ 268
Query: 362 RW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W RD + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSRDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSEHL 313
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPNS
Sbjct: 202 DGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEIYD 264
>gi|381163582|ref|ZP_09872812.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora azurea
NA-128]
gi|379255487|gb|EHY89413.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora azurea
NA-128]
Length = 300
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 162/402 (40%), Gaps = 123/402 (30%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGG +++L D+ D LWS+ L A + +V HR F AGA I T SYQAS G
Sbjct: 18 DGGLATELEARGHDLSDA--LWSARLLLDAPEEIVAAHRAFFDAGAVIATTASYQASFEG 75
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E +D ++ +L++ SVD ++ ARD
Sbjct: 76 FAE-RGIDRATATRLLRRSVDLARQ----------------ARD---------------- 102
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
+ GD R +A SVGPYGA+L DGSEYRG Y ++
Sbjct: 103 --DVSGD---------------------GRPRFVAASVGPYGAALADGSEYRGAY--GLT 137
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
A + +WHRPR++ L EA D+LAIET+P EA+ L L AWLSF+ D +
Sbjct: 138 VARLRDWHRPRLEVLAEARPDLLAIETVPDVVEAEALVEAL-AGIGVPAWLSFTVADGRT 196
Query: 248 ISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+ E+F A +PD + AVGVNC P VS + K P+VVYPNSG
Sbjct: 197 RAGQPLAEAFAVAA-----GSPD-VAAVGVNCCAPSDVSPALACAKAVTGKPVVVYPNSG 250
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E +DA W
Sbjct: 251 EG--------------------------------------------------WDARRRAW 260
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
P + W+ EG +VGGCCR D + RL
Sbjct: 261 TGATQFSP--RLAARWVAEGAHVVGGCCRVRPADIAELARRL 300
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
+PD + AVGVNC P VSP + K P+VVYPNSGE +D
Sbjct: 212 SPD-VAAVGVNCCAPSDVSPALACAKAVTGKPVVVYPNSGEGWD 254
>gi|312075903|ref|XP_003140623.1| hypothetical protein LOAG_05038 [Loa loa]
gi|307764213|gb|EFO23447.1| hypothetical protein LOAG_05038 [Loa loa]
Length = 316
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 173/397 (43%), Gaps = 114/397 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V+L+DGGF ++L G + H LWS L + ++Q H+ FI+AG+DI++TN+YQA
Sbjct: 10 VQLLDGGFGTELEA-AGYNVKNHSLWSCAALFDNPNLILQVHKRFIEAGSDIILTNTYQA 68
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
I M + ++ +K V ++A+ + +++ + GSVGPYG
Sbjct: 69 CISTMMNSRGMTKIAAESSLKKLVSLAQQAVDECSAREKVK---------VVGSVGPYGV 119
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
DGSEY G YV+ + E + ++H
Sbjct: 120 IFNDGSEYSGHYVDELEEQVLVDYH----------------------------------- 144
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSC 242
+ L++AG ++A ET+P+ KEA + + + H W+SFSC
Sbjct: 145 ------------IQQTIPLLQAGLKVIAYETVPSYKEAVAILKAVNAINHSYNFWISFSC 192
Query: 243 KDDKHISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSSLIE--QLKTENIPLVVY 299
K+ + ++ ESF + V + ++ N ++ +G+NC P ++ L++ + ++P +VY
Sbjct: 193 KNGEQTNHNESFCKSVEKISHHPN---ILGIGINCTSPNYITQLLQSASISVNSLPFIVY 249
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE + C ++W N K ++P+ G+
Sbjct: 250 PNSGE--------------EYECG-TKKWRNGKC--------------IFPDMGQ----- 275
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+ +W + G+ +VGGCCR AE
Sbjct: 276 ----------------LMEWKNLGMKVVGGCCRVGAE 296
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 502 MKHRLDDWDDKHISNGESFTQVARTCYNMNP----DQLIAVGVNCVRPLMVSPLIEQ--L 555
+ H + W NGE C ++ ++ +G+NC P ++ L++ +
Sbjct: 180 INHSYNFWISFSCKNGEQTNHNESFCKSVEKISHHPNILGIGINCTSPNYITQLLQSASI 239
Query: 556 KTENIPLVVYPNSGERYDFHLADEKN-NCVKSDVTHL 591
++P +VYPNSGE Y+ +N C+ D+ L
Sbjct: 240 SVNSLPFIVYPNSGEEYECGTKKWRNGKCIFPDMGQL 276
>gi|116627472|ref|YP_820091.1| homocysteine methyltransferase [Streptococcus thermophilus LMD-9]
gi|386086277|ref|YP_006002151.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus ND03]
gi|386344276|ref|YP_006040440.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus JIM 8232]
gi|387909369|ref|YP_006339675.1| homocysteine methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
gi|116100749|gb|ABJ65895.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptococcus
thermophilus LMD-9]
gi|312277990|gb|ADQ62647.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus ND03]
gi|339277737|emb|CCC19485.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus JIM 8232]
gi|387574304|gb|AFJ83010.1| homocysteine methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
Length = 316
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 148/302 (49%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ T+SYQA++
Sbjct: 15 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V K ARD +
Sbjct: 73 PGLVE-AGLTEKAAEQIIALTVRLAK----------------AARDKV------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 104 ---------------------WGALDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 142
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ + ++HRPRIQ L++ G D+LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 143 Q-ITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 201
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 202 QIPDAISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALITYPNS 259
Query: 303 GE 304
GE
Sbjct: 260 GE 261
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T L+D++ P + I D + VD + + E AL+ + E +M
Sbjct: 142 GQITIKELKDFHRPRIQILLD--QGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSF 199
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 200 TVQIPD--AISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALIT 255
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 256 YPNSGEVYD 264
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 49/161 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
I++LK + P + + + G +LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 146 IKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTVQIPD 205
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 206 AISDGTSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKALITYPNSGEVYDG 265
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W D+D V+ GV ++GGCCRT D
Sbjct: 266 DSQTWKPKDKDALTLVEHSKYWHAHFGVKILGGCCRTRPND 306
>gi|400536414|ref|ZP_10799949.1| homocysteine methyltransferase [Mycobacterium colombiense CECT
3035]
gi|400330496|gb|EJO87994.1| homocysteine methyltransferase [Mycobacterium colombiense CECT
3035]
Length = 294
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 138/300 (46%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A + H + +AGA I T SYQ S
Sbjct: 2 LLDGGLATELEARGHDLSD--PLWSAGLLADAPRDIAAVHAAYFRAGARIATTASYQGSF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF D + L++ SV+ + ARD AG G
Sbjct: 60 EGFAA-RGFDRRETAGLLRRSVELAQA----------------ARDE--AGGAG------ 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+L+A S+GPYGA+L DGSEYRG Y
Sbjct: 95 ---------------------------------LLVAASIGPYGAALADGSEYRGRY--G 119
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A +A WHRPR++ L +AGAD+LA ET+P EAQ L L+R + AWLS++ D
Sbjct: 120 LSVAALARWHRPRLEILADAGADLLACETVPDVDEAQALVELVRS-VGKPAWLSYTIDGD 178
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
+ G+ + D+++A+GVNC P V I + P++ YPNSGE
Sbjct: 179 R-TRAGQPLADAFAVAAGV--DEIVAIGVNCCAPGDVLPAIARAAAVGKPVIAYPNSGER 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 47/152 (30%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L + ++G +LA ET+P EAQ L L+R + AWLS++
Sbjct: 133 LEILADAGADLLACETVPDVDEAQALVELVRS-VGKPAWLSYTIDGDRTRAGQPLADAFA 191
Query: 339 ---------------CKTENI------------PLVVYPNSGERYDAVNARWIDRDLCEP 371
C ++ P++ YPNSGER+D + WI
Sbjct: 192 VAAGVDEIVAIGVNCCAPGDVLPAIARAAAVGKPVIAYPNSGERWDGLRHTWIGPSRFSA 251
Query: 372 VDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
+ W G +VGGCCR + ++
Sbjct: 252 --QLAKQWTAAGARIVGGCCRVGPAEIAEIRR 281
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
D+++A+GVNC P V P I + P++ YPNSGER+D
Sbjct: 197 DEIVAIGVNCCAPGDVLPAIARAAAVGKPVIAYPNSGERWD 237
>gi|55820663|ref|YP_139105.1| homocysteine methyltransferase [Streptococcus thermophilus LMG
18311]
gi|55736648|gb|AAV60290.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus LMG 18311]
Length = 322
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 148/302 (49%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ T+SYQA++
Sbjct: 21 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQATL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V K ARD +
Sbjct: 79 PGLVE-AGLTEKAAEQIIALTVRLAK----------------AARDKV------------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 110 ---------------------WGALDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 148
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ + ++HRPRIQ L++ G D+LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 149 Q-ITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 207
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 208 QIPDAISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALITYPNS 265
Query: 303 GE 304
GE
Sbjct: 266 GE 267
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T L+D++ P + I D + VD + + E AL+ + E +M
Sbjct: 148 GQITIKELKDFHRPRIQILLD--QGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 206 TVQIPD--AISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEVYD 270
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 49/161 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
I++LK + P + + + G +LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 152 IKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTVQIPD 211
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 212 AISDGTSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKALITYPNSGEVYDG 271
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W D+D V+ GV ++GGCCRT D
Sbjct: 272 DSQTWKPKDKDALTLVEHSKYWHAHFGVKILGGCCRTRPND 312
>gi|300769244|ref|ZP_07079132.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300493273|gb|EFK28453.1| homocysteine methyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 309
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 164/401 (40%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAAQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV++A +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVTDA-----------------VIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ W Q W+SFS KD +
Sbjct: 134 PSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWTQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S VA P+ ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLA-VAAKWVAAQPN-VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W +
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQE 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE ALV T+ + + + D + + +G S VA P+ ++AVGV
Sbjct: 164 LDEVQALVQLITTTWTQQPYWVSFSIKD--PQTLCDGTSLA-VAAKWVAAQPN-VVAVGV 219
Query: 541 NCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
NC ++P + LK +PL+VYPNSG++YD
Sbjct: 220 NCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYD 253
>gi|422344868|ref|ZP_16425792.1| hypothetical protein HMPREF9432_01852 [Selenomonas noxia F0398]
gi|355376322|gb|EHG23576.1| hypothetical protein HMPREF9432_01852 [Selenomonas noxia F0398]
Length = 311
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 149/305 (48%), Gaps = 62/305 (20%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F+++L + D LWS+ L D V H D+++AGAD+V + SYQ
Sbjct: 12 DVIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVRDVHLDYLRAGADVVTSASYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF + + + L++ SV +EA RD+ +A
Sbjct: 70 ATAEGFQK-RGFTAEEAEALLQKSVRLAQEA----------------RDMYMA------- 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
E +E +P + L+A S+GPYGA L DGSEYRGDY
Sbjct: 106 --------------ERPAE------------EP--EPLVAASIGPYGAYLADGSEYRGDY 137
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
E + +H R+ L A D+LA ET+P EA+ L R LRE + AW SFS
Sbjct: 138 --DADEDVLTAFHAERLAVLAAARPDLLACETLPCLVEARALVRALREKEIRIPAWFSFS 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVY 299
C+D HIS+G T +A + +N + A+G+NC P V LI ++ E P+VVY
Sbjct: 196 CRDAAHISDG---TPIAACAHWLNSVPEAAAIGLNCTSPQYVEELIRTIRRETEKPVVVY 252
Query: 300 PNSGE 304
PNSGE
Sbjct: 253 PNSGE 257
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 55/150 (36%), Gaps = 51/150 (34%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCK-------------- 340
L V + +LA ET+P EA+ L R LRE + AW SFSC+
Sbjct: 152 LAVLAAARPDLLACETLPCLVEARALVRALREKEIRIPAWFSFSCRDAAHISDGTPIAAC 211
Query: 341 ---------------------------------TENIPLVVYPNSGERYDAVNARWIDRD 367
TE P+VVYPNSGE YDA + W
Sbjct: 212 AHWLNSVPEAAAIGLNCTSPQYVEELIRTIRRETEK-PVVVYPNSGESYDASDKTW--HG 268
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E W G L+GGCCRT D
Sbjct: 269 AAEDFAAATRRWRAAGARLIGGCCRTAPRD 298
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPN 567
D HIS+G T +A + +N + A+G+NC P V LI ++ E P+VVYPN
Sbjct: 198 DAAHISDG---TPIAACAHWLNSVPEAAAIGLNCTSPQYVEELIRTIRRETEKPVVVYPN 254
Query: 568 SGERYD 573
SGE YD
Sbjct: 255 SGESYD 260
>gi|77406718|ref|ZP_00783757.1| homocysteine S-methyltransferase [Streptococcus agalactiae H36B]
gi|77414067|ref|ZP_00790236.1| homocysteine S-methyltransferase [Streptococcus agalactiae 515]
gi|77159865|gb|EAO71007.1| homocysteine S-methyltransferase [Streptococcus agalactiae 515]
gi|77174681|gb|EAO77511.1| homocysteine S-methyltransferase [Streptococcus agalactiae H36B]
Length = 351
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 177/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS +L A+ H D+I+AGADIV T++YQA++
Sbjct: 52 ILHGALGTELESRGCDV--SGKLWSDKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 109
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A ++
Sbjct: 110 QGLAQ-VGVSESQAEDLIRLTVQLAK------AVREQV---------------------- 140
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 141 ---------------------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 178
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G D+LA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 179 -DIYKEGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLVEDFPQVEAYMSFTS 237
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPN
Sbjct: 238 QDGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPN 295
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 296 SGE--------------------------------------------------IYDGASQ 305
Query: 362 RW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W RD + + +DW G +VGGCCRT D + L
Sbjct: 306 SWQSSRDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSEHL 350
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPNS
Sbjct: 239 DGKTISDGSAVAGLAKAI-DVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPNS 296
Query: 569 GERYD 573
GE YD
Sbjct: 297 GEIYD 301
>gi|365906100|ref|ZP_09443859.1| homocysteine methyltransferase [Lactobacillus versmoldensis KCTC
3814]
Length = 316
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 56/337 (16%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D+ + LWS+ L +A+ H+ + +AGAD+ +TN+YQA+I
Sbjct: 16 VVDGAMATELEKH--DVDTDNELWSATALIENPEAITAVHKSYFQAGADVAITNTYQANI 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ L L +S QLI +V ++A
Sbjct: 74 ERFIQ-LGLSKKASQQLIIKAVKLAQKA-------------------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R +Y + +++ + A LIAGSV PYGA L DGSEYRGDY
Sbjct: 101 ------RTEYFDSLTKNERQKR--------AEFPLIAGSVVPYGAYLADGSEYRGDYDLS 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ E ++HR R+ L +AG D+ A ET P E + L L+R E+P Q AWL+FS KD
Sbjct: 147 IQE--YQDFHRSRMSLLDKAGVDLFAFETQPNFAETKALVELIRAEFPKQYAWLTFSIKD 204
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
+ +G S Q A +N+ +Q+ A+GVNC + ++ ++ + P++VYPN+G
Sbjct: 205 PLTLCDGTSL-QTAVKYFNVF-EQVSAIGVNCTTLENIEETVKNIRAVTDKPIIVYPNNG 262
Query: 304 E-HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+ + +T + +A L+ +W A L C
Sbjct: 263 DVYDPKTKTWTPNPQADTFADLVPKWVKAGAQLIGGC 299
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 57/152 (37%), Gaps = 47/152 (30%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-------------------- 340
+G + A ET P E + L L+R E+P Q AWL+FS K
Sbjct: 164 AGVDLFAFETQPNFAETKALVELIRAEFPKQYAWLTFSIKDPLTLCDGTSLQTAVKYFNV 223
Query: 341 -------------TENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDK 374
ENI P++VYPN+G+ YD W +
Sbjct: 224 FEQVSAIGVNCTTLENIEETVKNIRAVTDKPIIVYPNNGDVYDPKTKTWTPNPQADTFAD 283
Query: 375 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
V W+ G L+GGCCRT D + L+
Sbjct: 284 LVPKWVKAGAQLIGGCCRTTPTDIKQIADYLN 315
>gi|292669507|ref|ZP_06602933.1| homocysteine S-methyltransferase [Selenomonas noxia ATCC 43541]
gi|292648870|gb|EFF66842.1| homocysteine S-methyltransferase [Selenomonas noxia ATCC 43541]
Length = 325
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 60/304 (19%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG F+++L + D LWS+ L D V + H D+++AGAD+V + SYQ
Sbjct: 26 DVIVLDGAFATELEARGFSVNDA--LWSAKALFERPDLVREVHLDYLRAGADVVTSASYQ 83
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ GF + + + L+++SV +EA RD+ +A
Sbjct: 84 ATVEGFQK-RGFSAEEAAALLQTSVHLAQEA----------------RDLYLA------- 119
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EH + + L+A SVGPYGA L DGSEYRG+Y
Sbjct: 120 --------------EHGAGGSAP--------------LVAASVGPYGAYLADGSEYRGNY 151
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFS 241
+ E + +H R+ L A D+LA ET+P EA+ + R LRE AW SFS
Sbjct: 152 --GIDEDALTAFHAERLAILAAAHPDLLACETLPCLVEARAVVRALREKEICIPAWFSFS 209
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYP 300
C+D HIS+G AR + + + AVG+NC P V LI ++ E P+V+YP
Sbjct: 210 CRDAAHISDGTPIAVCAR--WLDSVPEAAAVGLNCTAPQHVEELIRAIRRETEKPIVIYP 267
Query: 301 NSGE 304
NSGE
Sbjct: 268 NSGE 271
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNS 568
D HIS+G AR + + + AVG+NC P V LI ++ E P+V+YPNS
Sbjct: 212 DAAHISDGTPIAVCAR--WLDSVPEAAAVGLNCTAPQHVEELIRAIRRETEKPIVIYPNS 269
Query: 569 GERYD 573
GE YD
Sbjct: 270 GESYD 274
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 54/150 (36%), Gaps = 51/150 (34%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWP-NQKAWLSFSCK-------------- 340
L + + +LA ET+P EA+ + R LRE AW SFSC+
Sbjct: 166 LAILAAAHPDLLACETLPCLVEARAVVRALREKEICIPAWFSFSCRDAAHISDGTPIAVC 225
Query: 341 ---------------------------------TENIPLVVYPNSGERYDAVNARWIDRD 367
TE P+V+YPNSGE YDA + W
Sbjct: 226 ARWLDSVPEAAAVGLNCTAPQHVEELIRAIRRETEK-PIVIYPNSGESYDASDKTW--HG 282
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E W G ++GGCCRT D
Sbjct: 283 AAENFAAAARRWRAAGARIIGGCCRTGPRD 312
>gi|419707482|ref|ZP_14234966.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus salivarius PS4]
gi|383282828|gb|EIC80808.1| Homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus salivarius PS4]
Length = 322
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 148/302 (49%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ T+SYQA++
Sbjct: 21 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKPEVIQEIHETYVAAGADLITTSSYQATL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ME L + Q+I +V K ARD +
Sbjct: 79 PGLMES-GLTEREAEQIIALTVQLAK----------------AARDKV------------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 110 ---------------------WVTLDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 148
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ T+ ++HRPRIQ L++ G D+LA+ETIP EAQ L LL E+P +A++SF+
Sbjct: 149 Q-ITVETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFPDVEAYISFTI 207
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ IS+G S + +A+ + Q++AVG+NC P++ + LK L+ YPNS
Sbjct: 208 QVPDAISDGTSLSDIAKLVSQSS--QILAVGINCSSPILYEQALPVLKKAGKALITYPNS 265
Query: 303 GE 304
GE
Sbjct: 266 GE 267
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 49/161 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSCKT-- 341
+E LK + P + + + G +LA+ETIP EAQ L LL E+P+ +A++SF+ +
Sbjct: 152 VETLKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFPDVEAYISFTIQVPD 211
Query: 342 -----------------------------------ENIP--------LVVYPNSGERYDA 358
+ +P L+ YPNSGE YD
Sbjct: 212 AISDGTSLSDIAKLVSQSSQILAVGINCSSPILYEQALPVLKKAGKALITYPNSGEVYDG 271
Query: 359 VNARWIDRDL-CEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
+ W +D + ++ DW GV ++GGCCRT D
Sbjct: 272 DSQTWKPKDKDALTLLEHSKDWHAHFGVQILGGCCRTRPND 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L+D++ P + I D + VD + + E AL+ + + ++
Sbjct: 148 GQITVETLKDFHRPRIQILLD--QGVDLLALETIPNHLEAQALIELLAEEFPDVEAYISF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S + +A+ + Q++AVG+NC P++ + LK L+
Sbjct: 206 TIQVPD--AISDGTSLSDIAKLVSQSS--QILAVGINCSSPILYEQALPVLKKAGKALIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEVYD 270
>gi|254556265|ref|YP_003062682.1| homocysteine methyltransferase [Lactobacillus plantarum JDM1]
gi|254045192|gb|ACT61985.1| homocysteine methyltransferase [Lactobacillus plantarum JDM1]
Length = 309
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 164/401 (40%), Gaps = 116/401 (28%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + DA+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPDAIQAVHQSYLDAGAKIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + QLI+ +V A RD
Sbjct: 74 F-EQAGIAAAQARQLIQQAVTIAHTA--------------------------------RD 100
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
S HV++A +IAGS+GPYGA L DGSEY G Y ++
Sbjct: 101 AS--------HVTDA-----------------VIAGSIGPYGAYLADGSEYTGAY--QLT 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
+ ++HR R+ ++ AG D+LA+ET+P E Q L +L+ WP Q W+SFS KD +
Sbjct: 134 PSAYQDFHRERLALIMAAGVDVLALETMPRLDEVQALVQLITTTWPQQPYWVSFSIKDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G S A+ P+ ++AVGVNC ++ + LK +PL+VYPNSG
Sbjct: 194 TLCDGTSLAAAAKW-VAAQPN-VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQA 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
L +V WL G ++GGCCRT +D + L
Sbjct: 262 THLSHQFASFVPQWLAAGARIIGGCCRTTPKDIATVARALS 302
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
++AVGVNC ++P + LK +PL+VYPNSG++YD
Sbjct: 214 VVAVGVNCTTLENIAPALTTLKAAVAVPLIVYPNSGDQYD 253
>gi|297203247|ref|ZP_06920644.1| homocysteine methyltransferase [Streptomyces sviceus ATCC 29083]
gi|197711333|gb|EDY55367.1| homocysteine methyltransferase [Streptomyces sviceus ATCC 29083]
Length = 313
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 168/395 (42%), Gaps = 121/395 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ D LWS+ LA +A+ + H + +AGAD+ +T+SYQA+
Sbjct: 26 VLDGGMSNQLESAGHDLSD--ELWSARLLAERPEAITEAHLAYYEAGADVAITSSYQATF 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF K I E R+ + L+A SVG
Sbjct: 84 EGF---------------------AKRGIGRE------RAAE-----LLALSVG------ 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ + A+ R R + +A SVGPYGA L DGSEYRG Y
Sbjct: 106 ---------LAQEATRQAQAKGVR-------RPLYVAASVGPYGAMLADGSEYRGRYGLS 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L AG D+LA+ETIP S EAQ L R +R AWLS+S D
Sbjct: 150 VAE--LEAFHRPRLEVLAAAGPDVLALETIPDSDEAQALLRAVRGL-GVPAWLSYSVAGD 206
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A + D++IAVGVNC P V + IE + P+VVYPN
Sbjct: 207 RTRAGQPLEEAFALAA------DVDEVIAVGVNCCVPEDVDNAIETAARVTGKPVVVYPN 260
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE W N+G R
Sbjct: 261 SGET----------------------W----------------------NAGAR------ 270
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
RW R V W G L+GGCCR E
Sbjct: 271 RWEGRSSF--TSDEVMGWRASGARLIGGCCRVGPE 303
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
D++IAVGVNC P V IE + P+VVYPNSGE ++
Sbjct: 225 DEVIAVGVNCCVPEDVDNAIETAARVTGKPVVVYPNSGETWN 266
>gi|443623082|ref|ZP_21107592.1| putative homocysteine S-methyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443343381|gb|ELS57513.1| putative homocysteine S-methyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 320
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 148/307 (48%), Gaps = 69/307 (22%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ D LWS+ LA +A+ + H + +AGAD+ +T+SY
Sbjct: 26 AGTVVLDGGMSNQLESAGHDLSD--ELWSARLLAERPEAITEAHLAYFEAGADVAITSSY 83
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + + + +L+ SV+ ++A+A
Sbjct: 84 QATFEGFAG-RGIGRERAAELLALSVELARDAVA-------------------------- 116
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
RG V R + +A SVGPYGA L DGSEYRG
Sbjct: 117 --------RARGKGVT-------------------RPLWVAASVGPYGAMLADGSEYRGR 149
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V E + +HRPR++ L A D+LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 150 YGLSVDE--LERFHRPRLEVLAGARPDVLALETVPDADEAKALLRAVRGL-GVPAWLSYS 206
Query: 242 CKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLV 297
D+ + E+F A + D++IAVGVNC P V + +E + P+V
Sbjct: 207 VAGDRTRAGQPLEEAFALAA------DADEVIAVGVNCCAPQDVDAAVETAARATGKPVV 260
Query: 298 VYPNSGE 304
VYPNSGE
Sbjct: 261 VYPNSGE 267
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 90/242 (37%), Gaps = 49/242 (20%)
Query: 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS-CKDDKHISNGESFTQVAR 259
A EAGAD+ + A+ E + RE + LS +D + G+ T+
Sbjct: 69 AYFEAGADVAITSSYQATFEGFAGRGIGRERAAELLALSVELARDAVARARGKGVTRPLW 128
Query: 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQ 319
++ P + + R S+ E + L V + +LA+ET+P + EA+
Sbjct: 129 VAASVGPYGAMLADGSEYRGRYGLSVDELERFHRPRLEVLAGARPDVLALETVPDADEAK 188
Query: 320 MLCRLLREWPNQKAWLSFS--------------------------------CKTENI--- 344
L R +R AWLS+S C +++
Sbjct: 189 ALLRAVRGL-GVPAWLSYSVAGDRTRAGQPLEEAFALAADADEVIAVGVNCCAPQDVDAA 247
Query: 345 ----------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTY 394
P+VVYPNSGE +DA W R + V W G L+GGCCR
Sbjct: 248 VETAARATGKPVVVYPNSGEAWDAEARAWDGRSTF--AAEQVRGWRASGARLIGGCCRVG 305
Query: 395 AE 396
E
Sbjct: 306 PE 307
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+ D++IAVGVNC P V +E + P+VVYPNSGE +D
Sbjct: 227 DADEVIAVGVNCCAPQDVDAAVETAARATGKPVVVYPNSGEAWD 270
>gi|445374291|ref|ZP_21426339.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5460]
gi|445388796|ref|ZP_21428054.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5461]
gi|444750544|gb|ELW75346.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5461]
gi|444750641|gb|ELW75437.1| homocysteine methyltransferase [Streptococcus thermophilus MTCC
5460]
Length = 316
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 147/302 (48%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ +SYQA++
Sbjct: 15 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKPEVIQELHETYVAAGADLITMSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V K ARD +
Sbjct: 73 PGLVE-AGLTEKAAEQIIALTVRLAK----------------AARDKV------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 104 ---------------------WGALDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 142
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ + ++HRPRIQ L++ G D+LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 143 Q-ITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 201
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 202 QIPDAISDGTSLAEIAKLVSQSN--QILAVGINCSSPLLYNQTLAFLKNAGKTLITYPNS 259
Query: 303 GE 304
GE
Sbjct: 260 GE 261
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T L+D++ P + I D + VD + + E AL+ + E +M
Sbjct: 142 GQITIKELKDFHRPRIQILLD--QGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSF 199
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 200 TVQIPD--AISDGTSLAEIAKLVSQSN--QILAVGINCSSPLLYNQTLAFLKNAGKTLIT 255
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 256 YPNSGEVYD 264
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 49/161 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
I++LK + P + + + G +LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 146 IKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTVQIPD 205
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 206 AISDGTSLAEIAKLVSQSNQILAVGINCSSPLLYNQTLAFLKNAGKTLITYPNSGEVYDG 265
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W D+D V+ GV ++GGCCRT + D
Sbjct: 266 DSQTWKPKDKDALTLVEHSKYWHAHFGVKILGGCCRTRSND 306
>gi|115440233|ref|NP_001044396.1| Os01g0772900 [Oryza sativa Japonica Group]
gi|53793355|dbj|BAD52936.1| putative homocysteine S-methyltransferase 4 [Oryza sativa Japonica
Group]
gi|56785223|dbj|BAD82075.1| putative homocysteine S-methyltransferase 4 [Oryza sativa Japonica
Group]
gi|113533927|dbj|BAF06310.1| Os01g0772900 [Oryza sativa Japonica Group]
gi|125572190|gb|EAZ13705.1| hypothetical protein OsJ_03627 [Oryza sativa Japonica Group]
gi|215706957|dbj|BAG93417.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740889|dbj|BAG97045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189133|gb|EEC71560.1| hypothetical protein OsI_03916 [Oryza sativa Indica Group]
Length = 328
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 167/393 (42%), Gaps = 129/393 (32%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L + D+ D LWS+ L +A + + H D++ AGA+I+ + SYQA+I
Sbjct: 26 VVDGGLATELEAHGADLHD--ELWSASCLVSAPHLIRKVHLDYLDAGANIITSASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG-SVGPYGAS 124
GF + L + S L++ SV +EA R I G S GPY
Sbjct: 84 QGF-QARGLSRERSEALLRRSVHIAQEA----------------RAIFAEGWSKGPYAN- 125
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
HR P R +L+A S+G YGA L DGSEY GDY
Sbjct: 126 -----------------------HR---SSPRRPVLVAASIGSYGAYLADGSEYTGDYGI 159
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
V++ T+ +HR R+Q L +AG D++A ETIP EAQ
Sbjct: 160 SVTKETLKSFHRRRLQVLADAGPDLIAFETIPNKLEAQ---------------------- 197
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++G+ T+ VA C + AVGVNC P +V LI + K + P+VVYP
Sbjct: 198 ----ASGDPITECAAVADACARVG-----AVGVNCTAPRLVHGLILSIRKVTSKPVVVYP 248
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE +A ET +EW + S
Sbjct: 249 NSGETYVA-ET--------------KEWVESEGGAS------------------------ 269
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ D V K W G ALVGGCCRT
Sbjct: 270 ----ETDFVSCVGK----WRQAGAALVGGCCRT 294
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERY 572
AVGVNC P +V LI + K + P+VVYPNSGE Y
Sbjct: 218 AVGVNCTAPRLVHGLILSIRKVTSKPVVVYPNSGETY 254
>gi|55822554|ref|YP_140995.1| homocysteine methyltransferase [Streptococcus thermophilus
CNRZ1066]
gi|55738539|gb|AAV62180.1| homocysteine S-methyltransferase (S-methylmethionine)
[Streptococcus thermophilus CNRZ1066]
Length = 322
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 147/302 (48%), Gaps = 58/302 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ DI LWS+ +L + + + H ++ AGAD++ T+SYQA +
Sbjct: 21 ILHGALGTEMEALGYDI--SGKLWSAKYLLEKSEVIQELHETYVAAGADLITTSSYQAIL 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G +E L ++ Q+I +V K ARD +
Sbjct: 79 PGLVE-AGLTEKAAEQIIVLTVRLAK----------------AARDKV------------ 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L + A+ LI+G VGPY A L +GSEY GDY
Sbjct: 110 ---------------------WGALDETEKAKRPYPLISGDVGPYAAYLANGSEYSGDYG 148
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
+ ++ + ++HRPRIQ L++ G D+LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 149 Q-ITIKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTV 207
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+ YPNS
Sbjct: 208 QIPDAISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALITYPNS 265
Query: 303 GE 304
GE
Sbjct: 266 GE 267
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T L+D++ P + I D + VD + + E AL+ + E +M
Sbjct: 148 GQITIKELKDFHRPRIQILLD--QGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSF 205
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ D IS+G S ++A+ N Q++AVG+NC PL+ + + LK L+
Sbjct: 206 TVQIPD--AISDGTSLAEMAKLVSQSN--QILAVGINCSSPLLYNQALAFLKNAGKALIT 261
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 262 YPNSGEIYD 270
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 51/170 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC---- 339
I++LK + P + + + G +LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 152 IKELKDFHRPRIQILLDQGVDLLALETIPNRLETQALIELLAEEFPEAEAYMSFTVQIPD 211
Query: 340 -----------------------------------------KTENIPLVVYPNSGERYDA 358
K L+ YPNSGE YD
Sbjct: 212 AISDGTSLAEMAKLVSQSNQILAVGINCSSPLLYNQALAFLKNAGKALITYPNSGEIYDG 271
Query: 359 VNARW--IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED--TLHMKHR 404
+ W D+D V+ GV ++GGCCRT D +L+ + R
Sbjct: 272 DSQTWKPKDKDALTLVEHSKYWHAHFGVKILGGCCRTRPNDIKSLYQEFR 321
>gi|373456109|ref|ZP_09547911.1| hypothetical protein HMPREF9453_02080, partial [Dialister
succinatiphilus YIT 11850]
gi|371934192|gb|EHO61999.1| hypothetical protein HMPREF9453_02080, partial [Dialister
succinatiphilus YIT 11850]
Length = 287
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 141/304 (46%), Gaps = 64/304 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG FS++L I D LWS+ L D V HR + AG+DIV + SYQA++
Sbjct: 13 VLDGAFSTELERQGFSIND--ELWSAIALYERPDLVKAVHRSYFDAGSDIVTSASYQATL 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E +L+ SV V+EA RD +A S
Sbjct: 71 EGF-EKKGFSRKEGRELLIRSVQLVQEA----------------RDEFLAES-------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
P R L A SVGPYGA L DGSEY+G Y
Sbjct: 106 ----------------------------SPERRPVPLAAASVGPYGAFLADGSEYKGHYG 137
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
+ E +A++HR R+ L EAG DI A ETIP EA +L E + AW+SFSCK
Sbjct: 138 KTREE--LADFHRERLHILAEAGPDIFACETIPCLLEALAETDVLSEIKNASAWVSFSCK 195
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLI-AVGVNCVRPLMVSSLIEQL-KTENIPLVVYPN 301
D H + A+ ++P + A+GVNC P V SLI ++ K + P+VVYPN
Sbjct: 196 DGLHTCGDDYIGDCAKA---LDPIPCVKAIGVNCTAPEYVESLILEIRKYTSKPVVVYPN 252
Query: 302 SGEH 305
SGEH
Sbjct: 253 SGEH 256
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
A+GVNC P V LI ++ K + P+VVYPNSGE YD
Sbjct: 221 AIGVNCTAPEYVESLILEIRKYTSKPVVVYPNSGEHYD 258
>gi|296085232|emb|CBI28727.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 168/397 (42%), Gaps = 117/397 (29%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V +IDGG +++L + D+ D PLWS+ L ++ + H D+++AGA
Sbjct: 20 GGVAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTVHLDYLEAGA-------- 69
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
D+ +SYQ ++ AR S + +L
Sbjct: 70 -----------DIIITASYQA------------TIQGFEARGFSRGESEALL-------- 98
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
S+ E R ++H R IL+A SVG YGA L DGSEY G
Sbjct: 99 RKSVEIACEARKMILKH------------------RPILVAASVGSYGAYLADGSEYSGI 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSF 240
Y + ++ T+ ++HR R+Q L +AGAD++A ET+P EAQ LL E + AW SF
Sbjct: 141 YGDEITVETLKDFHRRRVQILADAGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSF 200
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
+ KD H+ +G+S + +A +C ++++VG+NC P + LI + K P+
Sbjct: 201 NSKDGVHVVSGDSLLECVSIAESC-----KKVVSVGINCTPPRFIHGLILSIKKVTTKPI 255
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
++YPNSGE P QK W+ + +
Sbjct: 256 LIYPNSGESY---------------------DPEQKEWVQKTGVS--------------- 279
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
E YV W + G +LVGGCCRT
Sbjct: 280 ------------VEDFVSYVNKWCEVGASLVGGCCRT 304
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIP 561
+ D H+ +G+S + +A +C ++++VG+NC P + LI +K P
Sbjct: 200 FNSKDGVHVVSGDSLLECVSIAESC-----KKVVSVGINCTPPRFIHGLILSIKKVTTKP 254
Query: 562 LVVYPNSGERYD 573
+++YPNSGE YD
Sbjct: 255 ILIYPNSGESYD 266
>gi|387783677|ref|YP_006069760.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
JIM8777]
gi|338744559|emb|CCB94925.1| homocysteine S-methyltransferase 1 [Streptococcus salivarius
JIM8777]
Length = 316
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 56/329 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G +++ + DI LWS+ +L + + + H ++ AG+D++ T+SYQA++
Sbjct: 15 ILHGALGTEMESLGYDI--SGKLWSAKYLLEKPEVIQKIHETYVAAGSDLITTSSYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + Q+I +V K ARD + A +L
Sbjct: 73 PGLID-AGLTEKEAEQIIALTVQLAK----------------AARDKVWA--------TL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D + + Y LI+G VGPY A L +GSEY GDY +
Sbjct: 108 DDSEKAKRPYP-----------------------LISGDVGPYAAYLANGSEYTGDYGQI 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+EA + ++HRPRIQ L++ G D+LA+ETIP EAQ L LL E+ +A++SF+ ++
Sbjct: 145 TTEA-LKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFSEAEAYISFTVQE 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+ S ++A+ DQ++A+G+NC PL+ + + LK L+ YPNSGE
Sbjct: 204 PGTISDRTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALTILKNAGKALITYPNSGE 261
Query: 305 -HILAIET-IPASKEAQMLCRLLREWPNQ 331
+ + +T P K+A L ++W Q
Sbjct: 262 VYDGSTQTWKPKDKDALTLVEHSKDWHAQ 290
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLD---EGVALVGGCCRTYAEDTLHMKH 504
G T + L+D++ P + I D + VD + + E AL+ ++E ++
Sbjct: 142 GQITTEALKDFHRPRIQILLD--QGVDLLALETIPNHLEAQALIELLAEEFSEAEAYISF 199
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVV 564
+ + IS+ S ++A+ DQ++A+G+NC PL+ + + LK L+
Sbjct: 200 TVQE--PGTISDRTSLDEIAQLV--GQSDQILALGINCSSPLLYNQALTILKNAGKALIT 255
Query: 565 YPNSGERYD 573
YPNSGE YD
Sbjct: 256 YPNSGEVYD 264
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 64/161 (39%), Gaps = 51/161 (31%)
Query: 287 EQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC----- 339
E LK + P + + + G +LA+ETIP EAQ L LL E+ +A++SF+
Sbjct: 147 EALKDFHRPRIQILLDQGVDLLALETIPNHLEAQALIELLAEEFSEAEAYISFTVQEPGT 206
Query: 340 ----------------------------------------KTENIPLVVYPNSGERYDAV 359
K L+ YPNSGE YD
Sbjct: 207 ISDRTSLDEIAQLVGQSDQILALGINCSSPLLYNQALTILKNAGKALITYPNSGEVYDGS 266
Query: 360 NARW--IDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAED 397
W D+D V+ + DW + GV ++GGCCRT D
Sbjct: 267 TQTWKPKDKDALTLVE-HSKDWHAQFGVKILGGCCRTRPND 306
>gi|456388069|gb|EMF53559.1| transferase [Streptomyces bottropensis ATCC 25435]
Length = 317
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 151/306 (49%), Gaps = 69/306 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG S+QL + D+ D LWS+ LA +A+ + H + +AGAD+ +T SYQ
Sbjct: 27 DVLVLDGGMSNQLESAGHDLSD--ELWSARLLAERPEALTEAHLAYFEAGADVAITASYQ 84
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF + +D + +L+ SV+ +A A A+ R G GP
Sbjct: 85 ATFEGFAK-RGIDGGRAAELMALSVESAVDA----AVEAKTR-----------GRSGP-- 126
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+L+A SVGPYGA L DGSEYRG Y
Sbjct: 127 ------------------------------------LLVAASVGPYGAMLADGSEYRGRY 150
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +HRPR++AL A D+LA+ETIP + EA+ L R +R AWLS++
Sbjct: 151 --GLSPAELERFHRPRLEALAAARPDVLALETIPDTDEAEALLRAVRGL-GVPAWLSYTV 207
Query: 243 KDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVV 298
D+ + E+F A + ++++AVGVNC V IE ++ P+VV
Sbjct: 208 AGDRTRAGQPLEEAFALAA------DSEEVVAVGVNCCASDDVDGAIETAVRVTGKPVVV 261
Query: 299 YPNSGE 304
YPNSGE
Sbjct: 262 YPNSGE 267
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 48/145 (33%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ETIP + EA+ L R +R AWLS++
Sbjct: 175 VLALETIPDTDEAEALLRAVRGL-GVPAWLSYTVAGDRTRAGQPLEEAFALAADSEEVVA 233
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C ++++ P+VVYPNSGE +DA W R + V W
Sbjct: 234 VGVNCCASDDVDGAIETAVRVTGKPVVVYPNSGETWDASARAWTGRSTF--TTEQVKGWR 291
Query: 381 DEGVALVGGCCRTYAEDTLHMKHRL 405
G L+GGCCR E + L
Sbjct: 292 AAGARLIGGCCRVGPEAIAAIARTL 316
>gi|418459543|ref|ZP_13030660.1| homocysteine methyltransferase [Saccharomonospora azurea SZMC
14600]
gi|359740364|gb|EHK89207.1| homocysteine methyltransferase [Saccharomonospora azurea SZMC
14600]
Length = 323
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 158/386 (40%), Gaps = 117/386 (30%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGG +++L D+ D LWS+ L A + +V HR F AGA I T SYQAS G
Sbjct: 12 DGGLATELEARGHDLSDA--LWSARLLLDAPEEIVAAHRAFFDAGAVIATTASYQASFEG 69
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E +D ++ +L++ SVD ++ ARD
Sbjct: 70 FAE-RGIDRATATRLLRRSVDLARQ----------------ARD---------------- 96
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
+ GD R +A SVGPYGA+L DGSEYRG Y ++
Sbjct: 97 --DVSGD---------------------GRPRFVAASVGPYGAALADGSEYRGAY--GLT 131
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
A + +WHRPR++ L EA D+LAIET+P EA+ L L AWLSF+ D +
Sbjct: 132 VARLRDWHRPRLEVLAEARPDLLAIETVPDVVEAEALVEAL-AGIGVPAWLSFTVADGR- 189
Query: 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHI 306
G+ T+ A +PD + AVGVNC P VS + K P+VVYPNSGE
Sbjct: 190 TRAGQPLTE-AFAVAAGSPD-VAAVGVNCCAPSEVSPALACAKAVTGKPVVVYPNSGEG- 246
Query: 307 LAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDR 366
+DA W
Sbjct: 247 -------------------------------------------------WDARRRAWTGA 257
Query: 367 DLCEPVDKYVTDWLDEGVALVGGCCR 392
P + W+ EG +VGGCCR
Sbjct: 258 TQFSP--RLAARWVAEGAHVVGGCCR 281
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 511 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSG 569
D G+ T+ A +PD + AVGVNC P VSP + K P+VVYPNSG
Sbjct: 187 DGRTRAGQPLTE-AFAVAAGSPD-VAAVGVNCCAPSEVSPALACAKAVTGKPVVVYPNSG 244
Query: 570 ERYD 573
E +D
Sbjct: 245 EGWD 248
>gi|221487139|gb|EEE25385.1| homocysteine S-methyltransferase-1, putative [Toxoplasma gondii
GT1]
Length = 434
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 198/440 (45%), Gaps = 53/440 (12%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DGG + L +G G PLW+S + +A D V + H DF AGAD+ +T +YQ
Sbjct: 9 DILLLDGGLGTHLRA-LGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL-EATHARIRSDDPARDILIAGSVGPY 121
AS+ GF + + L +++ + +++ EA L E RS R+ + GP
Sbjct: 68 ASLTGFAQ-IGLSPSTAHDAVALAINLAAEARRLAEEGDVSARSFGEERE-----NEGPE 121
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+LR+ + D V+ + +R R IL+ S G YGASL G+EYRG+
Sbjct: 122 VDALRNAATSDTDSVQQGNARDADRRYRRRN----RKILV--SNGSYGASLGGGAEYRGN 175
Query: 182 YVEHVSEATMAEWHRPRIQALVEAG--ADILAIETIPASKEAQMLCRLLREWP--HQKAW 237
Y VSE T ++HR R+QA +E D + ET+P EA+ + LLRE+P K W
Sbjct: 176 Y--GVSEKTFHDYHRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTW 233
Query: 238 LSFSCKDDKHISNGESF-TQVARTCYNMNPDQLIA-VGVNCVR-----PLMVS-----SL 285
L+F+CK ++ GE F + VA DQ I+ +GVNC PL+ S SL
Sbjct: 234 LAFTCKSPTELAGGEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSL 293
Query: 286 IEQLKTENIP----LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
L+ P +V YPN+ + E+Q P + S
Sbjct: 294 AASLEKTRDPWSLQVVCYPNNEAARNTKDCSSKDFESQEESCHGHVSPAETCMCSIGVDQ 353
Query: 342 ENIPLVVYPN----SGERYDAVNAR----------WIDRDLCEPVDKYVTDWLDEGVALV 387
V P SG + + + + P+ V WL+ GV V
Sbjct: 354 ST---TVKPQTSLVSGSAAGGLRCQPKLQANRMPHGFTKTIKHPLASRVPAWLNGGVTAV 410
Query: 388 GGCCRTYAEDTLHMKHRLDD 407
GGCC T ED ++ L++
Sbjct: 411 GGCCGTGPEDLKEIRAVLEN 430
>gi|421531953|ref|ZP_15978328.1| homocysteine methyltransferase [Streptococcus agalactiae
STIR-CD-17]
gi|403642853|gb|EJZ03659.1| homocysteine methyltransferase [Streptococcus agalactiae
STIR-CD-17]
Length = 314
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 175/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 15 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+ + + + LI+ +V K A
Sbjct: 73 QELAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L + + I LI+G VGPY A L DGSEY G Y
Sbjct: 100 ----------REQV-------WKSLTKEGKSERIYPLISGDVGPYAAFLADGSEYTGLY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ G D+LA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 142 -DIDKGGLKNFHRHRIELLLDEGVDLLALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPN
Sbjct: 201 QDGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPN 258
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 259 SGE--------------------------------------------------VYDGASQ 268
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 269 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 313
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ +++P Q++A+G+NC P +V+ ++ + + + PLV YPNS
Sbjct: 202 DGKTISDGSAVADLAK-AIDVSP-QVVALGINCSSPSLVADFLQAIAEQTDKPLVTYPNS 259
Query: 569 GERYD 573
GE YD
Sbjct: 260 GEVYD 264
>gi|147846114|emb|CAN82018.1| hypothetical protein VITISV_003417 [Vitis vinifera]
Length = 347
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 171/373 (45%), Gaps = 82/373 (21%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAV-------------------- 41
V +IDGG +++L + D+ D PLWS+ L ++ +
Sbjct: 20 GGVAVIDGGLATELERHGADLND--PLWSAKCLLSSPHLIRTGSRFVNLGWYSLRLLGVK 77
Query: 42 ---------VQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKE 92
H D+++AGADI++T SYQ +S+Y + +
Sbjct: 78 NQNVAVWEFKMVHLDYLEAGADIIITASYQV-------------NSAYIYVNR---LLFR 121
Query: 93 AIALEATHARIRSDDPARDILIAGSVGP-YGASLRDGSEYRGDYVEHVSEATM--AEWHR 149
+ LEA+ + V P G S+ E R Y + E E R
Sbjct: 122 GLKLEAS--------------LEEKVKPCLGKSVEIACEARKMYYDRCIEFACDDXEDGR 167
Query: 150 LITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADI 209
++ P IL+A SVG YGA L DGSEY G Y + ++ T+ ++HR R+Q L +AGAD+
Sbjct: 168 ILKHRP---ILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADL 224
Query: 210 LAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQ---VARTCYNMN 265
+A ET+P EAQ LL E + AW SF+ KD H+ +G+S + +A +C
Sbjct: 225 IAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVSIAESC---- 280
Query: 266 PDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324
++++VG+NC P + LI + K P+++YPNSGE P KE +L +
Sbjct: 281 -KKVVSVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGE-----SYDPEQKEWVVLSSI 334
Query: 325 LREWPNQKAWLSF 337
R K +LSF
Sbjct: 335 TRNQCLGKLFLSF 347
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVY 565
D H+ +G+S + +A +C ++++VG+NC P + LI +K P+++Y
Sbjct: 260 DGVHVVSGDSLLECVSIAESC-----KKVVSVGINCTPPRFIHGLILSIKKVTTKPILIY 314
Query: 566 PNSGERYDFHLADEKNNCVKSDVTH 590
PNSGE YD ++K V S +T
Sbjct: 315 PNSGESYD---PEQKEWVVLSSITR 336
>gi|336394276|ref|ZP_08575675.1| homocysteine methyltransferase [Lactobacillus farciminis KCTC 3681]
Length = 314
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 57/337 (16%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + + LWS+ + +A+ H+ + + GAD TN+YQA++
Sbjct: 16 VVDGAMATELEKH--GVKTDSDLWSATAMIEKPEAITAVHKSYFEQGADFATTNTYQANV 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G FME L L S LI +VD K+A
Sbjct: 74 GKFME-LGLSEKDSKNLITQAVDLAKKA-------------------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + ++E A+ L+AGSVGPYGA L DGSEY G Y +
Sbjct: 101 ------RDQYFDSLTEEERAQKVY---------PLVAGSVGPYGAYLADGSEYTGAY--N 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+++ ++H R+ L +AG D+ A ET P E L LL+ ++P Q+AWLSFS +D
Sbjct: 144 LTKKEYQDFHVQRMDLLDKAGVDLFAFETQPNFDETVALVDLLQTKFPDQRAWLSFSIQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ + +G S + + Y + DQ+ A+GVNC + ++ + + + P++VYPN+G
Sbjct: 204 SETLCDGTSLYEAVK--YFEDVDQVSAIGVNCTNLENIQDVVRNINQVTDKPIIVYPNNG 261
Query: 304 E-HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+ + +T + +A L+ EW A L C
Sbjct: 262 DIYDPETKTWQKNPQADTFTDLVPEWIEAGAKLIGGC 298
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 47/151 (31%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK-------------------- 340
+G + A ET P E L LL+ ++P+Q+AWLSFS +
Sbjct: 163 AGVDLFAFETQPNFDETVALVDLLQTKFPDQRAWLSFSIQDSETLCDGTSLYEAVKYFED 222
Query: 341 -------------TENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDK 374
ENI P++VYPN+G+ YD W +
Sbjct: 223 VDQVSAIGVNCTNLENIQDVVRNINQVTDKPIIVYPNNGDIYDPETKTWQKNPQADTFTD 282
Query: 375 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
V +W++ G L+GGCCRT ED + L
Sbjct: 283 LVPEWIEAGAKLIGGCCRTTPEDIKQIADYL 313
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
DE VALV + + + + D + + +G S + + Y + DQ+ A+GV
Sbjct: 176 FDETVALVDLLQTKFPDQRAWLSFSIQD--SETLCDGTSLYEAVK--YFEDVDQVSAIGV 231
Query: 541 NCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
NC + ++ + + + P++VYPN+G+ YD
Sbjct: 232 NCTNLENIQDVVRNINQVTDKPIIVYPNNGDIYD 265
>gi|357235744|ref|ZP_09123087.1| homocysteine S-methyltransferase [Streptococcus criceti HS-6]
gi|356883726|gb|EHI73926.1| homocysteine S-methyltransferase [Streptococcus criceti HS-6]
Length = 315
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 170/405 (41%), Gaps = 110/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L Y G + G LWS+ +L A+ H +++AG+DIV T SYQA++
Sbjct: 15 ILHGALGTELE-YRGYDVSGK-LWSAKYLLEDPQAIQDIHETYLRAGSDIVTTASYQATL 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E+ L + + +I S+V K A RD +
Sbjct: 73 PGLEEY-GLSEEEAKAVIASTVSIAKAA----------------RDQV------------ 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
W L ++ A+ LI+G +GPY A L DGSEY G Y
Sbjct: 104 ---------------------WSELAGEEQAKRPYPLISGDIGPYAAYLADGSEYTGAY- 141
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSC 242
V++ + ++HRPRI L + G D+LA+ETIP E Q L LL E+P +A++SF+
Sbjct: 142 GSVTKKELMDFHRPRIAILQDQGVDLLALETIPNLLEVQALVDLLASEFPGMEAYMSFTS 201
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+D IS+G +VA + Q++A+G+NC P + S ++ L+ PLV YPN
Sbjct: 202 QDGLSISDGTPIAEVAPLVDDSR--QILALGLNCSSPSVYPSFLQGLRNYSQKPLVTYPN 259
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 260 SGE--------------------------------------------------VYDGASQ 269
Query: 362 RWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D D + + +W G +VGGCCRT D + RL
Sbjct: 270 TWTKDPDHSHTLLENTLEWQKLGAKVVGGCCRTRPSDIQILSSRL 314
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDW---LDEGVALVGGCCRTYAEDTLHMKH 504
GS T L D++ P + I +D + VD + L E ALV + +M
Sbjct: 142 GSVTKKELMDFHRPRIAILQD--QGVDLLALETIPNLLEVQALVDLLASEFPGMEAYMS- 198
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLV 563
D IS+G +VA + Q++A+G+NC P + ++ L+ PLV
Sbjct: 199 -FTSQDGLSISDGTPIAEVAPLVDDSR--QILALGLNCSSPSVYPSFLQGLRNYSQKPLV 255
Query: 564 VYPNSGERYD 573
YPNSGE YD
Sbjct: 256 TYPNSGEVYD 265
>gi|353230829|emb|CCD77246.1| hypothetical protein Smp_210320 [Schistosoma mansoni]
Length = 360
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 140/314 (44%), Gaps = 59/314 (18%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ ++++DGGF ++ IDGH WSS L + VV+ H+ F++AG D++ TN+
Sbjct: 13 LTEIRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNT 72
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ + L + + L+ ++V + A
Sbjct: 73 YQAAPSTLGKALGISIGEAKNLMHTAVHLAQRA--------------------------- 105
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R+ E + T +E+ R + +LIAGS+GPYGA DGSEY G
Sbjct: 106 -----RE---------EENNSVTASEFQRKLP------VLIAGSLGPYGACAADGSEYTG 145
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y VS + E+H R + L+E+G D +A ET+P KE +C ++R P W+S
Sbjct: 146 SYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVSSICEVMRRLPSAYCWISV 205
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP----------LMVSSLIEQLK 290
S D + S G+ VA C +Q+ VGVNC P L + E
Sbjct: 206 SSPDGEKTSGGDLLASVA--CEVAKCEQVFGVGVNCNIPHDCIGKGLANLNSQTCKESEN 263
Query: 291 TENIPLVVYPNSGE 304
T + ++ Y N G+
Sbjct: 264 TSSKLILFYANDGQ 277
>gi|357410607|ref|YP_004922343.1| homocysteine S-methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320007976|gb|ADW02826.1| homocysteine S-methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 311
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 161/404 (39%), Gaps = 126/404 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG S+QL D+ D LWS+ L+ + HR + +AGA +++T SYQA+
Sbjct: 25 LLDGGLSNQLEAQGCDLSDA--LWSAGLLSDEPRQIEAAHRAYARAGAQVLITASYQATF 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + I R R+ + L+AGSV
Sbjct: 83 EGF---------------------ARRGIG------RARAAE-----LMAGSV------- 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E R D R+ +A SVGPYGA L DGSEYRG Y
Sbjct: 104 --------------------ELARRAGADTGRESWVAASVGPYGAMLADGSEYRGRYGMT 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPR++ L AG D+LA+ET+P + EA+ L R +++ WLS+S D
Sbjct: 144 VRE--LVRFHRPRVETLAAAGPDVLALETVPDADEAEALLRAVQDL-DVPVWLSYSVAGD 200
Query: 246 KHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A DQ++AVGVNC P +E P+VVYPN
Sbjct: 201 RTRAGQPLAEAFGLAA------GIDQVVAVGVNCCDPADADRAVEVAAAATGKPVVVYPN 254
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE EW DA
Sbjct: 255 SGE----------------------EW----------------------------DADGR 264
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W R EP V W + G LVGGCCR + + RL
Sbjct: 265 DWTGRSTFEP--GRVRHWRNAGARLVGGCCRVGPSNIEALGARL 306
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
DQ++AVGVNC P +E P+VVYPNSGE +D
Sbjct: 219 DQVVAVGVNCCDPADADRAVEVAAAATGKPVVVYPNSGEEWD 260
>gi|392948446|ref|ZP_10314056.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus pentosus KCA1]
gi|392436428|gb|EIW14342.1| homocysteine S-methyltransferase (cobalamin-dependent)
[Lactobacillus pentosus KCA1]
Length = 304
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 156/392 (39%), Gaps = 116/392 (29%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L + LWS+ + A+ H+ ++ AGA I+ TN+YQA++
Sbjct: 16 DGAMATELEKR--GVATNSALWSATAMLDHPAAIQSVHQSYLDAGAQIMTTNTYQANVPA 73
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E + + + QLI+ +V +A +T A + IAGSVGPYGA L D
Sbjct: 74 F-EQAGIPAEQARQLIQKAVTVAHDARDASSTTAAV----------IAGSVGPYGAYLAD 122
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
GSEY G+Y +S
Sbjct: 123 GSEYTGNY-------------------------------------------------QLS 133
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDK 246
A +H+ R++ +++AG D+LA+ET+P E Q L L+ WP Q W+SFS +D +
Sbjct: 134 PAAYQAFHQERLELIIDAGVDVLALETMPRLDEVQALVDLVTTRWPKQPYWVSFSIRDPQ 193
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEH 305
+ +G A+ + ++AVGVNC + + L+ IPL+VYPNSG
Sbjct: 194 TLCDGTPLATAAQ--WVAAQPNVVAVGVNCTALENIEPALATLRAAVTIPLIVYPNSG-- 249
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
++YD V W
Sbjct: 250 ------------------------------------------------DQYDPVTKTWQP 261
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL +V WL G ++GGCCRT D
Sbjct: 262 TDLSHQFASFVPKWLAAGAQIIGGCCRTTPVD 293
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
++AVGVNC + P + L+ IPL+VYPNSG++YD
Sbjct: 214 VVAVGVNCTALENIEPALATLRAAVTIPLIVYPNSGDQYD 253
>gi|409385377|ref|ZP_11238022.1| Homocysteine S-methyltransferase [Lactococcus raffinolactis 4877]
gi|399207218|emb|CCK18937.1| Homocysteine S-methyltransferase [Lactococcus raffinolactis 4877]
Length = 305
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 175/401 (43%), Gaps = 124/401 (30%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DG S L +I H LW++ L +A+ Q H+ + AGA++ +T +YQ
Sbjct: 11 DVVILDGSMSRLLEEQGLEI--NHRLWTALALVEQPEAIYQVHKQYFDAGANVAITATYQ 68
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ F D+ Y + ++D++K ++ L
Sbjct: 69 ATVKSFA---DVGYSE-----EQAIDFIKHSVTL-------------------------- 94
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ + + +GD +W +AGSVGPYGA L DGSEY G Y
Sbjct: 95 -AQKAKQDSKGD---------QTKW-------------LAGSVGPYGAYLSDGSEYTGAY 131
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR--EWPHQKAWLSF 240
+S + M +H RI+ L+ +G D+LAIETIP E +++ ++ +P W+S
Sbjct: 132 --QLSSSDMKTFHESRIKTLIASGVDVLAIETIPRLDELRVILDIVAAVNFP---VWVSV 186
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQ-LIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
S KD H++NG+S + + + DQ +IA G+NCV P +V+ +IE L
Sbjct: 187 SLKDTVHLANGDSLSDFQQL---VEQDQNVIAYGINCVSPQLVAPVIETL---------- 233
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
++ A+K PLV YPNSG +DAV
Sbjct: 234 -----------SVAATK----------------------------PLVAYPNSGAIFDAV 254
Query: 360 NARWIDRDLCEPVDKYVTD---WLDEGVALVGGCCRTYAED 397
W + E V + D W +G L+GGCC + +D
Sbjct: 255 TKTWSEEISVEQV--FSADARCWHQKGAKLIGGCCCSTEQD 293
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQ-LIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPN 567
D H++NG+S + + + DQ +IA G+NCV P +V+P+IE L PLV YPN
Sbjct: 190 DTVHLANGDSLSDFQQL---VEQDQNVIAYGINCVSPQLVAPVIETLSVAATKPLVAYPN 246
Query: 568 SGERYD 573
SG +D
Sbjct: 247 SGAIFD 252
>gi|15827776|ref|NP_302039.1| homocysteine methyltransferase [Mycobacterium leprae TN]
gi|221230253|ref|YP_002503669.1| homocysteine methyltransferase [Mycobacterium leprae Br4923]
gi|13093328|emb|CAC30428.1| possible transferase [Mycobacterium leprae]
gi|219933360|emb|CAR71572.1| possible transferase [Mycobacterium leprae Br4923]
Length = 293
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 142/306 (46%), Gaps = 73/306 (23%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A +V H + +AGA I T SYQ
Sbjct: 9 SVLINDGGLATELEARGNDLSD--PLWSARLLTDAPQEIVAVHVAYFRAGATIATTVSYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + D + +L++ SV A RD + AG
Sbjct: 67 ASFEGFAAR-GIGRDQAIRLMRRSVALASAA----------------RDEISAGG----- 104
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ +A SVGPYGA+L DGSEYRG Y
Sbjct: 105 ------------------------------------LCVAASVGPYGAALADGSEYRGRY 128
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A +A WHRPR++ L +AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 129 --GLSVAALARWHRPRLEVLADAGADVLALETIPDIDEAEALVDLVRS-VGVPAWLSYTI 185
Query: 243 KDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
+ + E+F A +++AVGVNC P V + I Q+ P++VY
Sbjct: 186 NGTRTRAGQPLAEAFAVAA------GVPKIVAVGVNCCAPDDVLAAI-QIANIGKPIIVY 238
Query: 300 PNSGEH 305
PNSGE
Sbjct: 239 PNSGER 244
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 54/156 (34%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA+ETIP EA+ L L+R AWLS++
Sbjct: 143 LEVLADAGADVLALETIPDIDEAEALVDLVRS-VGVPAWLSYTINGTRTRAGQPLAEAFA 201
Query: 339 ---------------CKTENI-----------PLVVYPNSGERYDAVNARWIDRDLCEP- 371
C +++ P++VYPNSGER+D R P
Sbjct: 202 VAAGVPKIVAVGVNCCAPDDVLAAIQIANIGKPIIVYPNSGERWD-------YRTWTGPR 254
Query: 372 --VDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ W G +VGGCCR D + L
Sbjct: 255 RFSAQLALQWTAAGARIVGGCCRVRPADIAELTKAL 290
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYDFH 575
+++AVGVNC P V I Q+ P++VYPNSGER+D+
Sbjct: 208 KIVAVGVNCCAPDDVLAAI-QIANIGKPIIVYPNSGERWDYR 248
>gi|254774531|ref|ZP_05216047.1| homocysteine methyltransferase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 291
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 138/300 (46%), Gaps = 67/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A + H + +AGA I T SYQAS
Sbjct: 2 LLDGGLATELEARGHDLSD--PLWSARLLADAPQEIGAVHAAYFRAGAMIATTASYQASF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L++ SV+ K ARD
Sbjct: 60 EGFAA-RGISRSDTAGLLRRSVELAKA----------------ARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +A + +A SVGPYGA+L DGSEYRG Y
Sbjct: 89 ---------------EAGVAGY-------------VAASVGPYGAALADGSEYRGRYGLS 120
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V + + +WHRPR++ L +A AD+LA+ETIP EA+ L L+R AWLS++ D
Sbjct: 121 VRQ--LEDWHRPRLEVLADADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTI-DG 176
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H G+ + +++AVGVNC P V I + P++VYPNSGEH
Sbjct: 177 AHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPAIGPARAVGKPVIVYPNSGEH 234
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 50/167 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+ QL+ + P L V ++ +LA+ETIP EA+ L L+R AWLS++
Sbjct: 121 VRQLEDWHRPRLEVLADADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTIDGAHT 179
Query: 339 --------------------------CKTENI------------PLVVYPNSGERYDAVN 360
C +++ P++VYPNSGE +D
Sbjct: 180 RAGQPLADAFAVAAGVPEIVAVGVNCCAPDDVLPAIGPARAVGKPVIVYPNSGEHWD--G 237
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W R + + W+ G +VGGCCR D ++ D
Sbjct: 238 RVWTGRSKFSA--ELASQWISAGARIVGGCCRVRPTDIAAVRRACSD 282
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D H G+ + +++AVGVNC P V P I + P++VYPNSG
Sbjct: 175 DGAHTRAGQPLADAFAVAAGVP--EIVAVGVNCCAPDDVLPAIGPARAVGKPVIVYPNSG 232
Query: 570 ERYD 573
E +D
Sbjct: 233 EHWD 236
>gi|339490325|ref|YP_004704830.1| homocysteine methyltransferase [Leuconostoc sp. C2]
gi|338851997|gb|AEJ30207.1| homocysteine methyltransferase [Leuconostoc sp. C2]
Length = 306
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 167/394 (42%), Gaps = 116/394 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+L D+ + WS+ L + + V + H+++ +GAD+ +T++YQA +
Sbjct: 14 ILDGGMGSELEKRQIDV--NNSWWSASALIQSPEDVREIHKNYFDSGADLAITDTYQAHV 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + L +Y+LI S+V K + +D D LIAGSVGPYGA L
Sbjct: 72 KSFTD-QGLSEQKAYELIDSAVALAKLGL----------TDSNRSDGLIAGSVGPYGAYL 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+G+EY GDY H+SE +H
Sbjct: 121 ANGAEYTGDY--HLSEFEFQAFH------------------------------------- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
RPRI L++ G D+LA+ETIP +EA+ L LL +E+P A+LSFS ++
Sbjct: 142 ----------RPRIVRLIDDGVDVLALETIPNFEEAKALGHLLQQEFPTVNAYLSFSTEN 191
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
H+ +G ++ Y + Q+ A+GVNC P + I+ + + ++VYPN+G
Sbjct: 192 GDHLWDGTRLSEA--VAYFESISQIKAIGVNCTAPQNILPAIKNITPNTSKKIIVYPNAG 249
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD RW
Sbjct: 250 --------------------------------------------------DEYDPETKRW 259
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + D+ V W + G L+GGCCRT +D
Sbjct: 260 VSQHGPIKWDELVPLWQEAGANLIGGCCRTSPDD 293
>gi|237831423|ref|XP_002365009.1| homocysteine S-methyltransferase-1 [Toxoplasma gondii ME49]
gi|211962673|gb|EEA97868.1| homocysteine S-methyltransferase-1 [Toxoplasma gondii ME49]
gi|221506825|gb|EEE32442.1| homocysteine S-methyltransferase-1, putative [Toxoplasma gondii
VEG]
Length = 434
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 200/440 (45%), Gaps = 53/440 (12%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DGG + L +G G PLW+S + +A D V + H DF AGAD+ +T +YQ
Sbjct: 9 DILLLDGGLGTHLRA-LGAEFHGDPLWASKAVLSAPDLVRRAHFDFFDAGADVAITATYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL-EATHARIRSDDPARDILIAGSVGPY 121
AS+ GF + + L +++ + +++ EA L E RS R+ + GP
Sbjct: 68 ASLTGFAQ-IGLSPSTAHDAVALAINLAAEARRLAEEGDVSARSFGEERE-----NEGPE 121
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+LR+ + D V+ + R IL+ S G YGASL G+EYRG+
Sbjct: 122 VDALRNAATSDTDSVQQGNARDADR----RYRRRNRKILV--SNGSYGASLGGGAEYRGN 175
Query: 182 YVEHVSEATMAEWHRPRIQALVEAG--ADILAIETIPASKEAQMLCRLLREWP--HQKAW 237
Y VSE T ++HR R+QA +E D + ET+P EA+ + LLRE+P K W
Sbjct: 176 Y--GVSEKTFHDYHRWRLQAALEQEHLVDGVVFETLPEHAEAKAIVSLLREFPSLRGKTW 233
Query: 238 LSFSCKDDKHISNGESF-TQVARTCYNMNPDQLIA-VGVNCVR-----PLMVS-----SL 285
L+F+CK ++ GE F + VA DQ I+ +GVNC PL+ S SL
Sbjct: 234 LAFTCKSPTELAGGEDFRSVVADVLKQDGADQYISGIGVNCAPISTTVPLLCSPPLRDSL 293
Query: 286 IEQLKTENIP----LVVYPNSGEHILAIETIPASKEAQ-------------MLCRL-LRE 327
L+ P +V YPN+ + E+Q +C + + +
Sbjct: 294 AASLEKTRDPWSLQVVCYPNNEAARNTKDCSSKDFESQEESCHGHVSRAETCMCSIGVDQ 353
Query: 328 WPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALV 387
K S + L P R + + + + P+ V WL+ GV V
Sbjct: 354 STTVKPQTSLVSGSAAGGLRCQPKL--RANRM-PHGFTKTIKHPLASRVPAWLNGGVTAV 410
Query: 388 GGCCRTYAEDTLHMKHRLDD 407
GGCC T ED ++ L++
Sbjct: 411 GGCCGTGPEDLKEIRAVLEN 430
>gi|296110581|ref|YP_003620962.1| YbgG [Leuconostoc kimchii IMSNU 11154]
gi|295832112|gb|ADG39993.1| YbgG [Leuconostoc kimchii IMSNU 11154]
Length = 306
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 167/394 (42%), Gaps = 116/394 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+L D+ + WS+ L + + V + H+++ +GAD+ +T++YQA +
Sbjct: 14 ILDGGMGSELEKRQIDV--NNSWWSASALIQSPEDVREIHKNYFDSGADLAITDTYQAHV 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + L +Y+LI S+V K + +D D LIAGSVGPYGA L
Sbjct: 72 KSFTD-QGLSEQKAYELIDSAVALAKLGL----------TDSNRSDGLIAGSVGPYGAYL 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+G+EY GDY H+SE +H
Sbjct: 121 ANGAEYTGDY--HLSEFEFQAFH------------------------------------- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
RPRI L++ G D+LA+ETIP +EA+ L LL +E+P A+LSFS ++
Sbjct: 142 ----------RPRIVRLIDDGVDVLALETIPNFEEAKALGHLLQQEFPTVNAYLSFSTEN 191
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
H+ +G ++ Y + Q+ A+GVNC P + I+ + + ++VYPN+G
Sbjct: 192 GDHLWDGTRLSEA--VAYFESISQIKAIGVNCTAPQNILPAIKNITPNTSKKIIVYPNAG 249
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD RW
Sbjct: 250 --------------------------------------------------DEYDPETKRW 259
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ + D+ V W + G L+GGCCRT +D
Sbjct: 260 VSQHGPIKWDELVPLWQEAGANLIGGCCRTSPDD 293
>gi|418472576|ref|ZP_13042304.1| homocysteine methyltransferase [Streptomyces coelicoflavus ZG0656]
gi|371546798|gb|EHN75230.1| homocysteine methyltransferase [Streptomyces coelicoflavus ZG0656]
Length = 309
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 162/391 (41%), Gaps = 116/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ G LWS+ LA +A+ + H + +AGAD+V+T+SYQA+
Sbjct: 15 VLDGGLSNQLEAAGHDL--GDALWSARLLADDPEAITRAHLAYFEAGADVVITSSYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + +L+ SV+ +EA VGP G +
Sbjct: 73 EGFAR-RGIGGQRAAELLALSVESAREAARRA-------------------RVGPAGGA- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + +A S GPYGA L DGSEYRG Y
Sbjct: 112 ------------------------------GRRLWVAASAGPYGAMLADGSEYRGRYGLD 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPR++ L A D+LA+ET+P + EA L R +R AWLS++ D
Sbjct: 142 VGE--LERFHRPRLEVLAAARPDVLALETVPDTVEAVALLRAVRGL-GVPAWLSYTVDGD 198
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
+ + E+F A + ++++AVGVNC P VS +
Sbjct: 199 RTRAGQPLEEAFALAA------DAEEVVAVGVNCCAPGDVSGAVRT-------------- 238
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
+ + P+V YPNSGE +DA
Sbjct: 239 -----------------------------------AARVTGKPVVAYPNSGEVWDARARA 263
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W R L P + V +W G LVGGCCR
Sbjct: 264 WRGRSLFAP--RLVREWRAAGARLVGGCCRV 292
>gi|433642656|ref|YP_007288415.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070008]
gi|432159204|emb|CCK56508.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070008]
Length = 302
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 166/405 (40%), Gaps = 118/405 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELARA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGRY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA+ETIP EA+ L L+R W AWLS++
Sbjct: 127 --GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEALVNLVR-WLATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W ++AW+
Sbjct: 241 SGEG----------------------WDGRRRAWVG------------------------ 254
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
R + +W+ G +VGGCCR D + L
Sbjct: 255 ----PRRFSGSPGQLAREWVAAGARIVGGCCRVRPVDIAEIGRAL 295
>gi|256079598|ref|XP_002576073.1| hypothetical protein [Schistosoma mansoni]
Length = 741
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 49/279 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ ++++DGGF ++ IDGH WSS L + VV+ H+ F++AG D++ TN+
Sbjct: 394 LTEIRVLDGGFGTESQKLSNLQIDGHLAWSSRLLMDDPELVVKIHKSFLRAGCDVISTNT 453
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQA+ + L + + L+ ++V + A
Sbjct: 454 YQAAPSTLGKALGISIGEAKNLMHTAVHLAQRA--------------------------- 486
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R+ E + T +E+ R + +LIAGS+GPYGA DGSEY G
Sbjct: 487 -----RE---------EENNSVTASEFQRKL------PVLIAGSLGPYGACAADGSEYTG 526
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y VS + E+H R + L+E+G D +A ET+P KE +C ++R P W+S
Sbjct: 527 SYANEVSFNELVEFHLSRAKILLESGVDFIAWETVPLLKEVSSICEVMRRLPSAYCWISV 586
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP 279
S D + S G+ VA C +Q+ VGVNC P
Sbjct: 587 SSPDGEKTSGGDLLASVA--CEVAKCEQVFGVGVNCNIP 623
>gi|227508077|ref|ZP_03938126.1| homocysteine methyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192306|gb|EEI72373.1| homocysteine methyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 315
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 169/402 (42%), Gaps = 105/402 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D + LWS+ L DAV H + +AGADI +T++YQA++
Sbjct: 16 VLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHTSYFEAGADITITDTYQANV 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + + D S +LI +V +ALE+
Sbjct: 74 EAFKK-VGFTEDQSEKLITEAV-----RLALES--------------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+ + A A+ A L+AGSVGPYGA L DGSEY G Y
Sbjct: 101 ------RDDFYATLPTAERAKR--------ALYPLVAGSVGPYGAYLADGSEYTGHY--Q 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
++ +H+ R++ + EAG D+ A ET P +E + L LLRE + + AWL+FS KD
Sbjct: 145 LTNEAYQTFHQRRMRLMDEAGVDVFAFETQPNFEETKALADLLREKFSDRFAWLTFSIKD 204
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+H+ +G S + A + + NP Q+ AVGVNC ++ I+ + + N P++VYPN+G
Sbjct: 205 PEHLCDGTSLAK-AVSYFEDNP-QISAVGVNCTSMNLIEDSIKTIASNTNKPIIVYPNNG 262
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD W
Sbjct: 263 --------------------------------------------------DIYDPKTKTW 272
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ WL G +VGGCCRT D + L
Sbjct: 273 TPNPNATTFAELTPKWLAAGAKIVGGCCRTTPADIEQVAESL 314
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +H+ +G S + A + + NP Q+ AVGVNC ++ I+ + + N P++VYPN+
Sbjct: 204 DPEHLCDGTSLAK-AVSYFEDNP-QISAVGVNCTSMNLIEDSIKTIASNTNKPIIVYPNN 261
Query: 569 GERYD 573
G+ YD
Sbjct: 262 GDIYD 266
>gi|168001020|ref|XP_001753213.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695499|gb|EDQ81842.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 341
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 168/395 (42%), Gaps = 115/395 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGGF++QL + DI D PLWS+ L T + H+++++AGA ++ T SYQA+I
Sbjct: 33 VTDGGFATQLERHGADIND--PLWSALCLITMPHLIRTVHKEYLQAGASVISTASYQATI 90
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF +S KEA L T RI ++ RD Y +
Sbjct: 91 QGF---------------QSRGLSTKEAEDLLQTSVRIAQEE--RDSFWK----EYQNKV 129
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R G+ + G Y + L A SVG YGA GDY
Sbjct: 130 RAGTAHAGLY---------------------QRALAAASVGSYGA---------GDYGPS 159
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+ L +AG D++A+ETIP E Q L LL E + AW+SF+ KD
Sbjct: 160 MTVDKLKDFHRRRLMVLADAGPDLIALETIPCKLETQALVELLAEENLRVPAWISFNSKD 219
Query: 245 DKHISNGESFT---QVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C Q+ AVG+NC P + LI+ + K N +VVYP
Sbjct: 220 GTNVVSGDSLSDCVALADKC-----TQVRAVGINCTPPRFILDLIQAVRKVTNKLIVVYP 274
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE+ YD
Sbjct: 275 NSGEY--------------------------------------------------YDPEI 284
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
+W++ D YV +W + G L+GGCCRT
Sbjct: 285 KQWVESTGVSDTDFVSYVHEWRNAGAQLIGGCCRT 319
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
Q+ AVG+NC P + LI+ + K N +VVYPNSGE YD
Sbjct: 241 QVRAVGINCTPPRFILDLIQAVRKVTNKLIVVYPNSGEYYD 281
>gi|296269295|ref|YP_003651927.1| homocysteine S-methyltransferase [Thermobispora bispora DSM 43833]
gi|296092082|gb|ADG88034.1| homocysteine S-methyltransferase [Thermobispora bispora DSM 43833]
Length = 288
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 159/402 (39%), Gaps = 121/402 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L D+ D LWS+ L + + H D+ AGAD+ T
Sbjct: 5 VLDGGLATHLEALGCDLRD--ELWSARLLIENPGIIRKAHLDYFAAGADVATT------- 55
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+SYQ S +V+ + + ARD+L ++
Sbjct: 56 ------------ASYQ--ASIPGFVRRGL----------TPGEARDLLRL--------AV 83
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R E R D A L+A SVGPYGA L +G+EY G Y
Sbjct: 84 RLAVEAR---------------------DEAGHGLVAASVGPYGAYLANGAEYTGAY--D 120
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ E + WHR R + L AGAD++A ETIP+ EA + RLLR P +AW+SFSC+DD
Sbjct: 121 LGEDGLFAWHRERFEILASAGADLVAFETIPSFPEACAVARLLRLAPEVRAWVSFSCRDD 180
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
+HI++G F + M Q++AVGVNC P + LI +VYPNSGE
Sbjct: 181 RHINDGTPFAECVALFSGM--PQVVAVGVNCTPPRHIPGLIRAGAR-----IVYPNSGE- 232
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
AW D V RW
Sbjct: 233 ---------------------------AW----------------------DPVGRRWTG 243
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
+ +W G +GGCCRT ++ RL +
Sbjct: 244 TSDPVSFGRAAVEWRALGATHIGGCCRTTPAHIREIRARLAE 285
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
DD+HI++G F + M Q++AVGVNC P + LI +VYPNSG
Sbjct: 179 DDRHINDGTPFAECVALFSGM--PQVVAVGVNCTPPRHIPGLIRAGAR-----IVYPNSG 231
Query: 570 ERYD 573
E +D
Sbjct: 232 EAWD 235
>gi|260905380|ref|ZP_05913702.1| homocysteine methyltransferase [Brevibacterium linens BL2]
Length = 308
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 165/397 (41%), Gaps = 124/397 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG + L + D+ H LWS+ L + D + + H DFI+AGA IV T
Sbjct: 20 VIDGGLGTALESRGIDL--SHELWSAALLRDSPDTLAEVHADFIRAGAQIVTT------- 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+SYQ + + + + +I E I AR + IA G
Sbjct: 71 ------------ASYQ--ATPLGFERASIPAEEGLRLI-----ARSVEIAAGAG------ 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D L+AGSVGPYGA+L +G+EY GDY H
Sbjct: 106 --------------------------------DALVAGSVGPYGAALGNGAEYTGDY--H 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S+ A +HRPRI+ALV AGAD+LAIET P+ E +L L E+ AWLS + D
Sbjct: 132 LSDEEFAAFHRPRIEALVNAGADLLAIETQPSLSEITVLAGLADEY-GIPAWLSVTLADQ 190
Query: 246 KHISNGESF---TQVARTCYNMNPDQLI-AVGVNCVRP-LMVSSLIEQLKTENIPLVVYP 300
+++G T ++ + ++I AVGVNCVRP L+ +L ++PL+ YP
Sbjct: 191 GDLADGSHMADRTPLSDLAEAVADSRMIRAVGVNCVRPSLVAPALAALASATDLPLIAYP 250
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA
Sbjct: 251 NSGE--------------------------------------------------TYDAAT 260
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + + + W+ GV ++GGCCRT D
Sbjct: 261 MEWREDSAFDTSPSTLAPWVSAGVRIIGGCCRTTPAD 297
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 499 TLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSPLIEQLKT 557
++ + + D D H+++ + +A + + AVGVNCVRP L+ L
Sbjct: 184 SVTLADQGDLADGSHMADRTPLSDLAEAVADSR--MIRAVGVNCVRPSLVAPALAALASA 241
Query: 558 ENIPLVVYPNSGERYD 573
++PL+ YPNSGE YD
Sbjct: 242 TDLPLIAYPNSGETYD 257
>gi|384246037|gb|EIE19528.1| homocysteine S-methyltransferase AtHMT-1 [Coccomyxa subellipsoidea
C-169]
Length = 296
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 162/384 (42%), Gaps = 102/384 (26%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS+ LA AV Q H F +AGAD+ T SYQAS GF E + +L++ SV
Sbjct: 10 LWSARMLAEDPAAVTQVHAAFYEAGADVATTASYQASFKGF-EQAGFGRADAEELLRKSV 68
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
D AR + + +GSE G + +
Sbjct: 69 QLA----------------DNARRLFWS-----------EGSELHGWRAKRLRP------ 95
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEA-G 206
L+A S GPYGA+L DGSEY G Y E VSE + ++HR R+QA+V A G
Sbjct: 96 ------------LVAFSAGPYGAALADGSEYDGSYAERVSEEQLMDFHRQRLQAIVGAPG 143
Query: 207 ADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM- 264
D++A ET+P KE + + RLL E AW+S S + I +GE + C +
Sbjct: 144 VDLIAFETVPCLKELRAISRLLCTEQLGIPAWISCSARSGTAICHGEDLLE---ECLPVM 200
Query: 265 -NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCR 323
P ++AVGVNC+ P +V LI+Q + L+ YPNSGE A
Sbjct: 201 CEPASVVAVGVNCLPPQLVDPLIKQGLPTKL-LLAYPNSGEEWDAAA------------- 246
Query: 324 LLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEG 383
R+W S + +N +AR W D G
Sbjct: 247 --RDWKG-----SSGLEVQNF-------------GCSAR---------------QWADSG 271
Query: 384 VALVGGCCRTYAEDTLHMKHRLDD 407
+++GGCCRT E + L D
Sbjct: 272 ASIIGGCCRTTPEHIRSVAECLAD 295
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYDFHLADEKNN 582
P ++AVGVNC+ P +V PLI+Q + L+ YPNSGE +D D K +
Sbjct: 202 EPASVVAVGVNCLPPQLVDPLIKQGLPTKL-LLAYPNSGEEWDAAARDWKGS 252
>gi|330718895|ref|ZP_08313495.1| homocysteine methyltransferase [Leuconostoc fallax KCTC 3537]
Length = 308
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 172/406 (42%), Gaps = 120/406 (29%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DGG S+L +I + LWS+ L + + + H+ + AGA +T++YQA +
Sbjct: 15 LDGGMGSELEQQ--NINVDNNLWSASALIQSPGTIAKIHQHYFDAGAQGAITDTYQAHVA 72
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
F+ D +Y+LI ++V
Sbjct: 73 TFLA-QGFDSHKAYELIDTAV--------------------------------------- 92
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
H+++ +A L T D D LI GSVGPYGA L +G+EY GDY H+
Sbjct: 93 -----------HLAKEGLA----LSTQD---DGLIIGSVGPYGAYLANGAEYTGDY--HL 132
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S+ ++HR RI+ LV+ D++ +ET+P EAQ L LL E+ A+LSFS KD
Sbjct: 133 SKQAYQDFHRQRIERLVQDEVDLIGLETMPNFTEAQALAELLETEFSETPAYLSFSIKDG 192
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP-LVVYPNSGE 304
+ +G S Y Q+ A+GVNC P + + ++ ++ + +++YPN+G
Sbjct: 193 NTLCDGTSL--ATAVGYFEKYAQIKAIGVNCTAPDNILTALQAIQPQTTKQIIIYPNAG- 249
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+ YD +W+
Sbjct: 250 -------------------------------------------------DTYDPQTKQWV 260
Query: 365 DRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
D P+D + V WL++G ++GGCCRT +D + +K +D W
Sbjct: 261 DD--YGPIDWQELVPQWLNQGATIIGGCCRTTPKDIIAIKQAIDSW 304
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 464 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 509
W+D P+D + V WL++G ++GGCCRT +D + +K +D W
Sbjct: 259 WVDD--YGPIDWQELVPQWLNQGATIIGGCCRTTPKDIIAIKQAIDSW 304
>gi|300173559|ref|YP_003772725.1| homocysteine S-methyltransferase [Leuconostoc gasicomitatum LMG
18811]
gi|333447545|ref|ZP_08482487.1| homocysteine methyltransferase [Leuconostoc inhae KCTC 3774]
gi|299887938|emb|CBL91906.1| homocysteine S-methyltransferase [Leuconostoc gasicomitatum LMG
18811]
Length = 306
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 171/398 (42%), Gaps = 116/398 (29%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+ V ++DGG S+L D+ + WS+ L + + + + H+++ AGA + +T++Y
Sbjct: 10 SGVVILDGGMGSELEKRQIDV--NNSWWSASALVQSPENICEIHKNYFNAGASLAITDTY 67
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA + F + L +Y+LI S+V+ K LE ++ RSD LIAGSVGPY
Sbjct: 68 QAHVKSFTD-QGLSDKKAYELIDSAVNLAKRG--LENSN---RSDG-----LIAGSVGPY 116
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L +G+EY GDY H+SE+ +H
Sbjct: 117 GAYLANGAEYTGDY--HLSESEYQTFH--------------------------------- 141
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
RPRI L+ G ++LA+ET+P E + L LL +E+P A+LSF
Sbjct: 142 --------------RPRIARLIADGVNVLALETMPNFDETKALGHLLQQEFPSVDAYLSF 187
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
+ ++ H+ +G ++ Y + Q+ A+GVNC P + ++ + + +VVY
Sbjct: 188 ATENGDHLWDGTPLSEA--VAYFESISQIKAIGVNCTSPQNILPALKNITPNTSKKIVVY 245
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PN+G+ YD
Sbjct: 246 PNAGDD--------------------------------------------------YDPA 255
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
RW+ + D+ V WL G +L+GGCCRT ED
Sbjct: 256 TKRWVSQHGPINWDELVPVWLAAGASLIGGCCRTSPED 293
>gi|383829820|ref|ZP_09984909.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
xinjiangensis XJ-54]
gi|383462473|gb|EID54563.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora
xinjiangensis XJ-54]
Length = 330
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 158/343 (46%), Gaps = 77/343 (22%)
Query: 3 NVKLIDGGFSSQLSTY--VGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
N + DGG +++L T +GD LWS+ L A + +V HR F AGA I T S
Sbjct: 44 NAVVSDGGLATELETRHDLGDA-----LWSARLLLDAPEEIVAAHRAFFDAGAVIATTAS 98
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQAS GF +D ++ L+ SV+ ++A
Sbjct: 99 YQASYSGFAA-RGIDRKAATALLHRSVELARQA--------------------------- 130
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
RD E GD V W +A SVGPYGA+L DGSEYRG
Sbjct: 131 -----RD--EVAGDGVRR--------W-------------VAASVGPYGAALADGSEYRG 162
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
DY +S + +WH PRI+ALVEA D+LA+ET+P EA+ L L AWL++
Sbjct: 163 DY--GLSVTALRDWHLPRIEALVEAEPDLLAVETVPDVVEAEALVAALGG-ADVPAWLTY 219
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS-SLIEQLKTENIPLVVY 299
+ + D+ G+ T+ +++AVGVNC P V+ +L + + PLV Y
Sbjct: 220 NVEGDR-TRAGQPLTEA--FAVAAEAPEVVAVGVNCCAPDDVAGALACARQVTDKPLVAY 276
Query: 300 PNSGE---HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
PNSGE H L T PA+ + LREW + A + C
Sbjct: 277 PNSGEGWDHDLRSWTGPATFSPEH----LREWIAEGAQVVGGC 315
>gi|325187970|emb|CCA22513.1| unnamed protein product [Albugo laibachii Nc14]
Length = 354
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 176/416 (42%), Gaps = 108/416 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFL----ATAKDAVVQTHRDFIKAGADIV 56
+ NV ++DGG S+++ Y G + LWS+ L A + A+V H ++ ++GA+I
Sbjct: 24 LHNVLILDGGLSTEIENYDGIRLSEGCLWSARLLLPQNAHLQQAIVHAHSNYFRSGAEIA 83
Query: 57 MTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG 116
T+SYQ S+ G + D ++ L+ + + ++I L
Sbjct: 84 TTSSYQVSLDGLLREFKGDIGTAQPLL---LPMLNKSIEL-------------------- 120
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
AS+ ++YR D + +IA S+G +GA+L DGS
Sbjct: 121 ------ASIARDTQYR-------------------IQDNSNKPMIAASIGCFGAALADGS 155
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLR------ 229
EYRG Y +V + + WH R +AL + DIL ETIP E + + RLL
Sbjct: 156 EYRGQYTLNVDQ--LVSWHLDRFRALALHPQTDILIFETIPCIIEVEAIVRLLNSHSEMI 213
Query: 230 EWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSSLIEQ 288
+ K ++ +C+++ +++GE ++ T ++ + LI +G+NC P V SL++
Sbjct: 214 QKRQLKVIIAVACRNESQLNSGEPIFKLTETIQSIRCQENLIGIGINCTNPKFVESLLKS 273
Query: 289 LKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLV 347
+ +VYPNSGE EW N K W
Sbjct: 274 FSC-SCDKIVYPNSGE----------------------EWNANAKQW------------- 297
Query: 348 VYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
PN + A W + Y+ W D G + GGCCRT +D +++
Sbjct: 298 ERPNGTQSATACLTDW---------ETYLPRWYDAGARIFGGCCRTSPKDIAAIRN 344
>gi|433631573|ref|YP_007265201.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070010]
gi|432163166|emb|CCK60568.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070010]
Length = 302
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 168/405 (41%), Gaps = 118/405 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELARA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGRY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 127 --GLSVAALMKWHLPRLEVLVDAGADVLALETIPDIDEAEALVNLVRRL-ATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
D G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 -DGTRTRAGQPLTDAFAVAAGV--PEIVAVGVNCCPPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W ++AW+ P +SG+
Sbjct: 241 SGEG----------------------WDGRRRAWVG--------PRRFSGSSGQ------ 264
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+W+ G +VGGCCR D + L
Sbjct: 265 --------------LAREWVAAGARIVGGCCRVRPVDIAEIGRAL 295
>gi|385676920|ref|ZP_10050848.1| homocysteine methyltransferase [Amycolatopsis sp. ATCC 39116]
Length = 292
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 164/396 (41%), Gaps = 128/396 (32%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ LWS+ LA A+V HR F +AGA + T SYQAS+
Sbjct: 4 VLDGGLATELEARGHDL--SGELWSARLLADDPAAIVAAHRAFFRAGATVATTASYQASL 61
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E L LD D + +L++ SV+ +E AR+ D+ L+A S+GPYGA+L
Sbjct: 62 AGFAE-LGLDRDEAVRLLQLSVELARE--------ARVTGDE-----LVAASIGPYGATL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y V+E +A +H
Sbjct: 108 ADGSEYRGHYGLSVAE--LATFH------------------------------------- 128
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR + L AG D+LA ET+P EA+ + L E AWLS++ + +
Sbjct: 129 ----------RPRAEILAAAGPDLLACETVPDVDEAEAML-LAIEGLDVPAWLSYTVEGE 177
Query: 246 KHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMV-SSLIEQLKTENIPLVVYPN 301
G+ T+ VAR DQ++AVGVNC P V ++ + P++ YPN
Sbjct: 178 S-TRAGQPLTEAFAVAR-----GNDQIVAVGVNCCDPRDVAAAAEIAREASGKPVIAYPN 231
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE +DA
Sbjct: 232 SGET--------------------------------------------------WDARAR 241
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W P V DWL GVA VGGCCR +D
Sbjct: 242 GWTGDPRFSP--DLVRDWLAAGVAYVGGCCRVSPDD 275
>gi|453051329|gb|EME98838.1| homocysteine methyltransferase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 303
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 138/303 (45%), Gaps = 74/303 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + + + H +++AGA +++T YQA+
Sbjct: 18 VLDGGLSNQLQAQGCDLSDA--LWSARLLADGPEQIERAHAAYVRAGARVLITAGYQATF 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + E T +R R + +A
Sbjct: 76 EGF---------------------ARRGVGREETAGLLR-----RSVALA---------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + R++ +A SVGPYGA L DGSEYRG Y
Sbjct: 100 -----------------------RRAAAEGEREVWVAASVGPYGAMLADGSEYRGRYGLG 136
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPRI+ L EAG D+LA+ET+P + E + L R +R WLS+SC
Sbjct: 137 VAE--LERFHRPRIEVLAEAGPDVLALETVPDADEGRALLRAVRGC-GVPVWLSYSCAGG 193
Query: 246 KHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A DQ++AVGVNC P V + + P+VVYPN
Sbjct: 194 RTRAGQPLAEAFALAA------GNDQVVAVGVNCCEPGEVEDAVRVAARVTGKPVVVYPN 247
Query: 302 SGE 304
SGE
Sbjct: 248 SGE 250
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 51/168 (30%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC----- 339
+ +L+ + P + V +G +LA+ET+P + E + L R +R WLS+SC
Sbjct: 137 VAELERFHRPRIEVLAEAGPDVLALETVPDADEGRALLRAVRGC-GVPVWLSYSCAGGRT 195
Query: 340 ----------------------------------------KTENIPLVVYPNSGERYDAV 359
+ P+VVYPNSGE +D
Sbjct: 196 RAGQPLAEAFALAAGNDQVVAVGVNCCEPGEVEDAVRVAARVTGKPVVVYPNSGEGWDDE 255
Query: 360 NARWIDRDLCEPVDKYVTD-WLDEGVALVGGCCRTYAEDTLHMKHRLD 406
RW R D D W+ G LVGGCC E + R++
Sbjct: 256 ARRWRGRPA---FDAGRADAWVAAGARLVGGCCCVGPERIAELAARME 300
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
DQ++AVGVNC P V + + P+VVYPNSGE +D
Sbjct: 212 DQVVAVGVNCCEPGEVEDAVRVAARVTGKPVVVYPNSGEGWD 253
>gi|227511098|ref|ZP_03941147.1| homocysteine methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227523282|ref|ZP_03953331.1| homocysteine methyltransferase [Lactobacillus hilgardii ATCC 8290]
gi|227085580|gb|EEI20892.1| homocysteine methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227089562|gb|EEI24874.1| homocysteine methyltransferase [Lactobacillus hilgardii ATCC 8290]
Length = 315
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 166/390 (42%), Gaps = 105/390 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + D + LWS+ L DAV H + +AGADI +T++YQA++
Sbjct: 16 VLDGAMATELEKHGVDT--SNDLWSATALINDPDAVKAVHTSYFEAGADITITDTYQANV 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + + D S +LI +V +ALE+
Sbjct: 74 EAFKK-VGFTEDQSEKLITEAV-----RLALES--------------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D+ + A A+ A L+AGSVGPYGA L DGSEY G Y
Sbjct: 101 ------RDDFYATLPTAERAKR--------AFYPLVAGSVGPYGAYLADGSEYTGHY--Q 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
++ +H+ R++ + EAG D+ A ET P +E + L LLRE + + AWL+FS KD
Sbjct: 145 LTNEAYQTFHQRRMRLMDEAGVDVFAFETQPNFEETKALADLLREKFSDRFAWLTFSIKD 204
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+H+ +G S + A + + NP Q+ AVGVNC ++ I+ + + N P++VYPN+G
Sbjct: 205 PEHLCDGTSLAK-AVSYFEDNP-QISAVGVNCTSMNLIEDSIKTIASNTNKPIIVYPNNG 262
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD W
Sbjct: 263 --------------------------------------------------DIYDPKTKTW 272
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ WL G +VGGCCRT
Sbjct: 273 TPNPNATTFAELTPKWLAAGAKIVGGCCRT 302
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +H+ +G S + A + + NP Q+ AVGVNC ++ I+ + + N P++VYPN+
Sbjct: 204 DPEHLCDGTSLAK-AVSYFEDNP-QISAVGVNCTSMNLIEDSIKTIASNTNKPIIVYPNN 261
Query: 569 GERYD 573
G+ YD
Sbjct: 262 GDIYD 266
>gi|384567924|ref|ZP_10015028.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora glauca
K62]
gi|384523778|gb|EIF00974.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora glauca
K62]
Length = 294
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 163/400 (40%), Gaps = 119/400 (29%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGG +++L D+ D LWS+ L A D +V HR F +AGA + T SYQAS G
Sbjct: 12 DGGLATELEARGHDLSDA--LWSARLLLDAPDEIVAAHRAFYEAGAVVATTASYQASFPG 69
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E LD + +L+ SV + R
Sbjct: 70 FAE-RGLDRAETTRLLHRSVALAR----------------------------------RA 94
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
G E+ GD R +A SVGPYGA+L DGSEYRGDY ++
Sbjct: 95 GEEFSGD---------------------GRRRFVAASVGPYGAALADGSEYRGDY--GLT 131
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
A + +WH PR++AL EA D+LA+ET+P EA+ L L AWL+++ + D+
Sbjct: 132 VAQLRDWHLPRLEALAEAEPDLLAVETVPDVVEAEALVGALAGL-GVPAWLTYTVEGDR- 189
Query: 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHI 306
+ A PD ++AVGVNC P V+ I + + P+VVYPNSGE
Sbjct: 190 -TRAGQPLAEALAVAAEAPD-VVAVGVNCCAPTDVADAIACARAVTDKPVVVYPNSGE-- 245
Query: 307 LAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
+W ++AW S RY + AR
Sbjct: 246 --------------------KWDARRRAWTGPS----------------RYSSELAR--- 266
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W+ G ++GGCCR D + L
Sbjct: 267 ------------QWVAAGARVIGGCCRVSPADIAEVARVL 294
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 532 PDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
PD ++AVGVNC P V+ I + + P+VVYPNSGE++D
Sbjct: 207 PD-VVAVGVNCCAPTDVADAIACARAVTDKPVVVYPNSGEKWD 248
>gi|440796259|gb|ELR17368.1| homocysteine smethyltransferase 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 293
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 146/310 (47%), Gaps = 76/310 (24%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVV--QTHRDFIKAGADIVMTNS 60
+ ++DGG ++QL D+ + LWS+ L + A + HR ++ AGAD+++T
Sbjct: 17 SFAVVDGGLATQLERLGADL--NNSLWSARLLLDSGGAAMIKAVHRAYLDAGADVLIT-- 72
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHAR-IRSDDPARDILIAGSVG 119
SSYQ ++E R + DD AR A
Sbjct: 73 -----------------SSYQ------------ASIEGFRQRGLGEDDEARAEFWA---- 99
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
D RG EW L+A S+GPYGA+L DGSEYR
Sbjct: 100 -------DEDRRRGR-----------EWP-----------LVAASIGPYGATLHDGSEYR 130
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGA---DILAIETIPASKEAQMLCRLLR-EWPHQK 235
GDY +S+ ++H PRI+ L+ A D+ A ET+P KE + L +L +P Q+
Sbjct: 131 GDYGARMSQEEFIDFHLPRIRLLLADPALAPDLFACETVPCLKEGRALVKLFETHFPDQR 190
Query: 236 AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENI 294
WLSF+C+D +H+S+G F++ + + AVGVNC P + L+E ++ +
Sbjct: 191 LWLSFTCRDQEHLSDGHKFSEA--VVELQQSEVVAAVGVNCTSPQFIGGLLESVRGSVRK 248
Query: 295 PLVVYPNSGE 304
PLVVYPNSGE
Sbjct: 249 PLVVYPNSGE 258
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G F++ + + AVGVNC P + L+E ++ + PLVVYPNS
Sbjct: 199 DQEHLSDGHKFSEA--VVELQQSEVVAAVGVNCTSPQFIGGLLESVRGSVRKPLVVYPNS 256
Query: 569 GERYD 573
GE +D
Sbjct: 257 GEGWD 261
>gi|184155304|ref|YP_001843644.1| homocysteine methyltransferase [Lactobacillus fermentum IFO 3956]
gi|227514597|ref|ZP_03944646.1| homocysteine S-methyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260662182|ref|ZP_05863078.1| homocysteine S-methyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|385812263|ref|YP_005848654.1| Homocysteine S-methyltransferase [Lactobacillus fermentum CECT
5716]
gi|183226648|dbj|BAG27164.1| homocysteine S-methyltransferase [Lactobacillus fermentum IFO 3956]
gi|227087008|gb|EEI22320.1| homocysteine S-methyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260553565|gb|EEX26457.1| homocysteine S-methyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|299783160|gb|ADJ41158.1| Homocysteine S-methyltransferase [Lactobacillus fermentum CECT
5716]
Length = 310
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 169/402 (42%), Gaps = 113/402 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L V LW+S L D V Q H D+ KAGAD+ +T++YQ ++
Sbjct: 13 VLDGSMSTPLE--VAGAKTNSDLWTSQTLIDNPDLVYQVHLDYFKAGADLTITDTYQTNV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+ L + + LIK +V +A
Sbjct: 71 DALVRH-GLSEEEARNLIKRAVQLANQA-------------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY + + +AGS+GPYGA L DGSEYRGDY
Sbjct: 98 ------RDDYEKETGKHNY----------------VAGSIGPYGAYLADGSEYRGDY--D 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD 244
++ + +H PR+ A++ G D LA+ET P E + LL+ P ++SFS +D
Sbjct: 134 LTAIQLQNFHLPRLAAILATGVDCLALETQPKLTEVVAILALLKTLEPTMPVYVSFSLRD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
+H+S+G S + + +P Q+ AVGVNCV +V+ I+ +K + P++VYPNSG
Sbjct: 194 AEHLSDGTSLKEAVQVV-TKDP-QVFAVGVNCVGLDLVTPAIKAIKEVTDKPVIVYPNSG 251
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
A+ + P K W R++ R+
Sbjct: 252 ----------ATYD-----------PTVKQW--------------------RFEEGTPRF 270
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
++ + DW+ G A++GGCC T +D + +L
Sbjct: 271 VNA---------IDDWITAGAAIIGGCCTTLPQDIAVVAEKL 303
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+S+G S + + +P Q+ AVGVNCV +V+P I+ +K + P++VYPNS
Sbjct: 193 DAEHLSDGTSLKEAVQVV-TKDP-QVFAVGVNCVGLDLVTPAIKAIKEVTDKPVIVYPNS 250
Query: 569 GERYD 573
G YD
Sbjct: 251 GATYD 255
>gi|455642523|gb|EMF21675.1| homocysteine methyltransferase [Streptomyces gancidicus BKS 13-15]
Length = 304
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 159/404 (39%), Gaps = 123/404 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL+ D+ D LWS+ LA +AV H + +AGAD+ +T SYQA+
Sbjct: 17 VLDGGMSNQLAAAGHDLSDA--LWSARLLADEPEAVTAAHLAYFEAGADVAITASYQATF 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + E +AL AR A+L
Sbjct: 75 EG------------FARRGTGRERAAELLALSVECART-------------------AAL 103
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R P R +A SVGPYGA L DGSEYRG Y
Sbjct: 104 R-------------------------APGPRRPRWVAASVGPYGAMLADGSEYRGRYGLS 138
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L A D+LA+ETIP + EA+ L R LR AWLS+S D
Sbjct: 139 VAE--LERFHRPRMEVLASASPDVLALETIPDTDEAEALLRALRGL-GVPAWLSYSAADG 195
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ + ++F AR D++IAVGVNC P ++ + P+VVYPN
Sbjct: 196 RTRAGQTLEDAFALAARA------DEVIAVGVNCCTPEDADHAVAVAARVTGKPVVVYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE R+DA
Sbjct: 250 SGE--------------------------------------------------RWDARAR 259
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W VT W D G LVGGCCR E + L
Sbjct: 260 AWTGEATFSA--SRVTGWRDAGARLVGGCCRVGPEAIASVARTL 301
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRP-LMVSPLIEQLKTENIPLVVYPNSGERYD 573
D++IAVGVNC P + + P+VVYPNSGER+D
Sbjct: 214 DEVIAVGVNCCTPEDADHAVAVAARVTGKPVVVYPNSGERWD 255
>gi|420153920|ref|ZP_14660852.1| homocysteine S-methyltransferase [Actinomyces massiliensis F0489]
gi|394756330|gb|EJF39431.1| homocysteine S-methyltransferase [Actinomyces massiliensis F0489]
Length = 325
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 163/397 (41%), Gaps = 112/397 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + +PLWS+ L A +AV H D++ AGA ++ TNSYQA+
Sbjct: 27 VLDGAMGTELDAR--GVGTANPLWSALALTEAPEAVTAVHTDYLFAGARVICTNSYQATA 84
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
M + DS A+ AT AR+ D ARD+
Sbjct: 85 PALMRTGLTEADSR---------------AVIATSARLALD--ARDL------------- 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
HV P +L+AGS+GPYGA L DG+EY G Y
Sbjct: 115 ------------HVKA------------HPQEPVLVAGSLGPYGAYLADGAEYTGAYTTD 150
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLC-RLLREWPHQKAWLSFSC-K 243
+ H PR++ L E G + AIET P EA+ L RL R P + W+SF
Sbjct: 151 APD--FEAVHLPRLETLSEEGIRLFAIETQPRLDEARWLVERLQRAVPGAECWVSFQVGS 208
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNS 302
D +H+++G + A + D +IAVG+NCV P +VS + L + PLV YPN+
Sbjct: 209 DGEHLADGTPLAEAA--AWADTEDAVIAVGLNCVAPSVVSLALPVLSAATHKPLVAYPNA 266
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSG-ERYDAVNA 361
G P+ + W P G ER+ A
Sbjct: 267 GGTYD---------------------PDSRTW--------------RPAGGPERFTRYTA 291
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDT 398
+WLD GV L+GGCCRT DT
Sbjct: 292 S-------------APEWLDAGVRLIGGCCRTTPVDT 315
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +H+++G + A + D +IAVG+NCV P +VS + L + PLV YPN+
Sbjct: 209 DGEHLADGTPLAEAA--AWADTEDAVIAVGLNCVAPSVVSLALPVLSAATHKPLVAYPNA 266
Query: 569 GERYD 573
G YD
Sbjct: 267 GGTYD 271
>gi|365852068|ref|ZP_09392476.1| putative homocysteine S-methyltransferase [Lactobacillus
parafarraginis F0439]
gi|363715497|gb|EHL98934.1| putative homocysteine S-methyltransferase [Lactobacillus
parafarraginis F0439]
Length = 325
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 161/394 (40%), Gaps = 105/394 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + + LWS+ L + +AV H+ + +AGADI +T++YQA++
Sbjct: 21 VLDGAMATELEKR--GVHTDNALWSATALISNPEAVKAVHKSYFEAGADIAITDTYQANV 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E S +LI +V + A RD Y
Sbjct: 79 NGF-EQAGYSEGQSEKLITEAVRLARAA----------------RDEF-------YFELP 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D R Y ++AGSVGPYGA L DGSEY GDY+
Sbjct: 115 ADQRANRAPYP-----------------------IVAGSVGPYGAYLADGSEYTGDYLLT 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+E E+H PR++ + +AG D+ A ET P EA+ L +++ +P+ AWLSFS D
Sbjct: 152 TTE--FQEFHAPRMELMAKAGVDMFAFETQPNFDEAKALASMMKTRFPNMFAWLSFSVSD 209
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
+H+ +G + A +N NP Q+ A+GVNC + + I+ + + P++VYPN+G
Sbjct: 210 PEHLCDGTPLAE-AVAYFNGNP-QISAIGVNCTSMNNIEATIKTIAPNTDKPIIVYPNNG 267
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD W
Sbjct: 268 --------------------------------------------------DIYDPKTKTW 277
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
WL G ++GGCCRT D
Sbjct: 278 EPNPQAATFADLTPKWLAAGAKIIGGCCRTTPGD 311
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H+ +G + A +N NP Q+ A+GVNC + I+ + + P++VYPN+
Sbjct: 209 DPEHLCDGTPLAE-AVAYFNGNP-QISAIGVNCTSMNNIEATIKTIAPNTDKPIIVYPNN 266
Query: 569 GERYD 573
G+ YD
Sbjct: 267 GDIYD 271
>gi|365926087|ref|ZP_09448850.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265034|ref|ZP_14767624.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394429067|gb|EJF01533.1| homocysteine methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 307
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 163/394 (41%), Gaps = 115/394 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L + + LWS+ L A + H+++ KAGADI +TN+
Sbjct: 16 VLDGAMATELEK--AGVDTANELWSATALLDAPQKITAVHQEYFKAGADIAITNT----- 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
YQ K + ++K+ I+ + + A I+
Sbjct: 69 --------------YQATKQA--FMKQGISADESSALIK--------------------- 91
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+A + +L+AGS+GPYGA L +GSEY GDY H
Sbjct: 92 ---------------QAVFCAQEAREKASGNKKLLLAGSIGPYGAFLANGSEYTGDY--H 134
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+S ++H PR+QAL EAGAD+ AIET P E + + LL R++ AW++ S KD
Sbjct: 135 LSIKAFQDFHYPRMQALFEAGADLFAIETQPNFVELEAITELLERKFSKMTAWVALSIKD 194
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+K + +G +V + Y + + A+GVNC ++ + ++ + PL+VYPN+G
Sbjct: 195 NKKLCDGTPLKKVVK--YLDQFESISAIGVNCTAMENITPALNEIHSLTTKPLIVYPNNG 252
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD ++ +W
Sbjct: 253 DI--------------------------------------------------YDPISKKW 262
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D + V W+ G ++GGCCRT +D
Sbjct: 263 QVNDKAQKFSDLVPTWVKSGAKIIGGCCRTTPDD 296
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D+K + +G +V + Y + + A+GVNC ++P + ++ + PL+VYPN+
Sbjct: 194 DNKKLCDGTPLKKVVK--YLDQFESISAIGVNCTAMENITPALNEIHSLTTKPLIVYPNN 251
Query: 569 GERYD 573
G+ YD
Sbjct: 252 GDIYD 256
>gi|350565947|ref|ZP_08934666.1| homocysteine S-methyltransferase [Peptoniphilus indolicus ATCC
29427]
gi|348663265|gb|EGY79859.1| homocysteine S-methyltransferase [Peptoniphilus indolicus ATCC
29427]
Length = 317
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 172/398 (43%), Gaps = 114/398 (28%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ + ++DG +++L +I D LWS+ L +A+ + H +++AG DI++T+S
Sbjct: 11 LKKILVLDGALATELERAGKNIND--SLWSTKILIEDSEAIKKVHLSYLEAGCDIILTSS 68
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ +I G M+ R + D A +I+
Sbjct: 69 YQTTIKGLMK-------------------------------RGYTKDEAIEII------- 90
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
S R +E + +Y L+ + + +I S+GPYGA L DGSEY G
Sbjct: 91 -KKSFRIANEAKEEY--------------LLKNSVEVEPIIGASIGPYGAFLSDGSEYTG 135
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
+Y V ++ M ++H +I+ L + G ++ A ETIP+ +EA ++ ++ E + ++SF
Sbjct: 136 NY--EVLDSEMRDFHYEKIKILKDEGVELFACETIPSFREALVIQKICEELEVE-YYISF 192
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVY 299
S KD+ IS+G S + A N+N L +G+NC P + SLI ++K+ N +VVY
Sbjct: 193 SAKDEYSISDGTSIRECAG---NLNGKYLKGIGINCTAPEFLESLIREIKSVYNGNIVVY 249
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE +D V
Sbjct: 250 PNSGEI--------------------------------------------------FDPV 259
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ W C V +W+ G ++GGCC+T +D
Sbjct: 260 SKTWSGNGQC--VFDLAENWIRAGANIIGGCCKTTPQD 295
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D+ IS+G S + A N+N L +G+NC P + LI ++K+ N +VVYPNS
Sbjct: 196 DEYSISDGTSIRECAG---NLNGKYLKGIGINCTAPEFLESLIREIKSVYNGNIVVYPNS 252
Query: 569 GERYD 573
GE +D
Sbjct: 253 GEIFD 257
>gi|148274014|ref|YP_001223575.1| homocysteine methyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831944|emb|CAN02915.1| putative homocysteine S-methyltransferase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 301
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 164/404 (40%), Gaps = 120/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG + L D+ D PLWS+ LA DAV H +F +AGAD+ +T SYQ
Sbjct: 13 VLDGGLGTLLEARGHDLSD--PLWSARVLADEPDAVRAAHAEFFRAGADVAITASYQV-- 68
Query: 66 GGFMEFL--DLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPAR-DILIAGSVGPYG 122
GF F L + L+++SV EA D+ AR D AG
Sbjct: 69 -GFEAFAARGLGTADTEALLRASVRLAAEA-----------RDEVAREDAAGAG------ 110
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD IA SVGPYGA+L DGSEY G
Sbjct: 111 ----------------------------------RDRWIAASVGPYGATLGDGSEYAGS- 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
++ + WH PR L +AGAD+LA ETIP+ E + L L R AWL+F+
Sbjct: 136 -SGLTRDELRRWHAPRFAVLADAGADLLACETIPSLDEGRALVDLARG-SGASAWLAFTV 193
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+ + + +GE + D+++AVG+NC P V + I ++ + P+VVYPN
Sbjct: 194 EGGR-LRSGEPMAE--GFALADEADEVVAVGINCAHPEEVPAAIAAARSVTDRPVVVYPN 250
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE R+DAV
Sbjct: 251 SGE--------------------------------------------------RWDAVAR 260
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W +P V W+ G +LVGGCC+ ++ M+ L
Sbjct: 261 AWGG----DPALPAVDAWIRAGASLVGGCCQVGPDEIARMRDAL 300
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 451 TNDFLRDYNSPNLWIDRDL------CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 504
T D LR +++P + D CE + LDEG ALV + A L
Sbjct: 139 TRDELRRWHAPRFAVLADAGADLLACETIPS-----LDEGRALVDLARGSGASAWLAFTV 193
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLV 563
+ + +GE + D+++AVG+NC P V I ++ + P+V
Sbjct: 194 -----EGGRLRSGEPMAE--GFALADEADEVVAVGINCAHPEEVPAAIAAARSVTDRPVV 246
Query: 564 VYPNSGERYD 573
VYPNSGER+D
Sbjct: 247 VYPNSGERWD 256
>gi|170783269|ref|YP_001711603.1| homocysteine methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157839|emb|CAQ03045.1| homocysteine s-methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 301
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 164/405 (40%), Gaps = 122/405 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG + L D+ D PLWS+ LA DAV H ++ +AGAD+ +T SYQ
Sbjct: 13 VLDGGLGTLLEARGHDLSD--PLWSARVLADEPDAVRAAHAEYFRAGADVAITASYQV-- 68
Query: 66 GGFMEFL--DLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F L + +L+++SV EA D+ A+D
Sbjct: 69 -GFEAFAARGLSAAETEELLRASVRLAAEA-----------RDEVAQD------------ 104
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPA--RDILIAGSVGPYGASLRDGSEYRGD 181
D P RD IA SVGPYGA+L DGSEY
Sbjct: 105 -----------------------------DAPGAGRDRWIAASVGPYGATLGDGSEYAAS 135
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
++ A + WH PR L ++GAD+LA ET+P+ E + L L R AWL+F+
Sbjct: 136 --SGLTRAELRRWHAPRFAVLADSGADLLACETVPSLDEGRALVDLARG-SGASAWLAFT 192
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYP 300
+ + + +GE + R D+++AVG+NC P V + I + + P+ VYP
Sbjct: 193 VQGGR-LRSGEPMAEGFRLANGA--DEIVAVGINCAHPEEVPAAIAAARGVTDRPVAVYP 249
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE R+DAV
Sbjct: 250 NSGE--------------------------------------------------RWDAVA 259
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W +P V W+ G ++VGGCCR ++ M+ L
Sbjct: 260 RAWGG----DPALPSVDAWIAAGASIVGGCCRVGPDEIRRMRDAL 300
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 451 TNDFLRDYNSPNLWIDRD------LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 504
T LR +++P + D CE V LDEG ALV + A L
Sbjct: 139 TRAELRRWHAPRFAVLADSGADLLACETVPS-----LDEGRALVDLARGSGASAWLAFTV 193
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLV 563
+ + +GE + R D+++AVG+NC P V I + + P+
Sbjct: 194 Q-----GGRLRSGEPMAEGFRLANGA--DEIVAVGINCAHPEEVPAAIAAARGVTDRPVA 246
Query: 564 VYPNSGERYD 573
VYPNSGER+D
Sbjct: 247 VYPNSGERWD 256
>gi|433635541|ref|YP_007269168.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070017]
gi|432167134|emb|CCK64644.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140070017]
Length = 302
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 167/405 (41%), Gaps = 118/405 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELARA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGRY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + WH PR++ LV+AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 127 --GLSVAALMRWHLPRLEVLVDAGADVLALETIPDIDEAEALVNLVRRL-ATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W ++AW+ P +SG+
Sbjct: 241 SGEG----------------------WDGRRRAWVG--------PRRFSGSSGQ------ 264
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+W+ G +VGGCCR D + L
Sbjct: 265 --------------LAREWVAAGARIVGGCCRVRPVDIAEIGRAL 295
>gi|77556462|gb|ABA99258.1| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
gi|215737069|dbj|BAG95998.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 57/287 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ V + H D+++AGA+I++T SYQA+I
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ +EA RD+ +
Sbjct: 89 QGF-ESKGFSKEQSEDLLAKSVEIAREA----------------RDMFLK---------- 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
EH +D P + IL+A S+G YGA L DGSEY GDY E
Sbjct: 122 -----------EH-------------SDRPIQHPILVAASIGSYGAYLADGSEYSGDYGE 157
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
+ + ++H+ R++ L EAG D++A ETIP EAQ LL E AW SF+ K
Sbjct: 158 AGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELLDECNISIPAWFSFNSK 217
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK 290
D HI +G+S + A + ++ AVG+NC P + LI ++
Sbjct: 218 DGVHIVSGDSLIECATIANGCS--KVGAVGINCTPPRFIHGLILSIR 262
>gi|154346672|ref|XP_001569273.1| putative homocysteine S-methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066615|emb|CAM44414.1| putative homocysteine S-methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 320
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 161/351 (45%), Gaps = 76/351 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG ++L +++D PLWS L + + +++AGA ++T SYQ
Sbjct: 10 HVVMLDGGLGTELEARGCNLLD--PLWSGEVLLKSPQKIQDVELAYLQAGARCLITASYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ ME L +++ +I+
Sbjct: 68 ITPKSLMEHRLLTEEAAVAVIEE------------------------------------- 90
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S+R R YV+ + A + +AGSVGPYGA L DGSEYRGDY
Sbjct: 91 -SVRIAQVVRERYVKE--------------NPQAEPVFVAGSVGPYGAYLADGSEYRGDY 135
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFS 241
V E E+HR RI AL+ AG D+LAIET ++ E + LL+ E P+ +AW+SF+
Sbjct: 136 VRSAEE--FKEFHRARIAALLRAGVDVLAIETQASAAEVHAIVALLQEEHPNCRAWVSFT 193
Query: 242 CKDD---KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLV 297
K IS+ ++ ++ M+P Q++AVGVNC+ S+++ L T +PLV
Sbjct: 194 TSRTSPVKAISDDTTWAEII-PFLEMSP-QVVAVGVNCIPMAEASAVLAHLHTLTTMPLV 251
Query: 298 VYPNSGE---------HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
VY NSGE H +A+ A L L EW +Q A + C
Sbjct: 252 VYTNSGESYNPATKTWHPIAM----ADGTTLSLAALAPEWASQGARIIGGC 298
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 529 NMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
M+P Q++AVGVNC+ S ++ L T +PLVVY NSGE Y+
Sbjct: 217 EMSP-QVVAVGVNCIPMAEASAVLAHLHTLTTMPLVVYTNSGESYN 261
>gi|418050792|ref|ZP_12688878.1| Homocysteine S-methyltransferase [Mycobacterium rhodesiae JS60]
gi|353188416|gb|EHB53937.1| Homocysteine S-methyltransferase [Mycobacterium rhodesiae JS60]
Length = 304
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 141/304 (46%), Gaps = 68/304 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V + DGG +++L D+ D LWS+ L + D +V H F +AGADI T SYQ
Sbjct: 9 TVLIADGGLATELEARGHDLSDD--LWSARLLVDSPDEIVAVHEAFYRAGADIATTASYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF E + QL+ SV+ + ARD + AG
Sbjct: 67 ASFDGFAE-RGFARREAEQLLVRSVELART----------------ARDNVDAGG----- 104
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
W +A SVGPYGA+L +G EY+G Y
Sbjct: 105 ------------------------W-------------VAASVGPYGAALANGEEYQGRY 127
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A +A+WHRPR++ LV A D+LA+ET+P EA+ L L+RE+ AWLS++
Sbjct: 128 --GLSVAQLADWHRPRLEVLVSAQPDVLALETVPDIDEAEALAGLVREF-GLPAWLSYTI 184
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL-MVSSLIEQLKTENIPLVVYPN 301
H G+ Q ++ ++AVGVNC P ++ ++ + P++VYPN
Sbjct: 185 A-GGHTRAGQPLEQAFAVAADV--PAIVAVGVNCSAPADVLGAIAVARRVSGKPVIVYPN 241
Query: 302 SGEH 305
SGE
Sbjct: 242 SGEQ 245
>gi|365828095|ref|ZP_09369926.1| hypothetical protein HMPREF0975_01709 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365264277|gb|EHM94087.1| hypothetical protein HMPREF0975_01709 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 325
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 165/404 (40%), Gaps = 112/404 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + D D PLWS+ L TA +AV Q H D++KAGA ++ TN+YQA++
Sbjct: 28 VLDGAMGTELDSRGVDTHD--PLWSALALTTAPEAVRQVHTDYLKAGARVITTNTYQATL 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
L A H R AR+++ AG+
Sbjct: 86 PAL---------------------------LRAGHDAHR----AREVIAAGA-------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
EA R + P +LIAG +GPYGA L DGSEY G Y V
Sbjct: 107 -----------RLAGEAA----RRFEAEHPEAQLLIAGGLGPYGAYLADGSEYTGVYDVG 151
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
+ + H PRI+ L G D+ A+ET+P EAQ L + + + + W+SF +
Sbjct: 152 ALDAPVFRDVHLPRIEMLAGEGIDLFALETLPRLDEAQALVGAVEDLAAESECWVSFQVR 211
Query: 244 -DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
D H+++G + A + + ++AVGVNCV P +V+ + L+ PLV YPN
Sbjct: 212 PDGAHLADGTPLAEAAAWAADQ--ETVVAVGVNCVAPDVVARALPVLREATTKPLVAYPN 269
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SG+ P K W +GE D + A
Sbjct: 270 SGDLY---------------------DPATKTW----------------KAGEEGDGLAA 292
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W GV L+GGCCRT + H L
Sbjct: 293 -------------LAPSWGASGVRLIGGCCRTRPAQIRELAHAL 323
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWL---DEGVALVGGCCRTYAEDTLHMKH 504
G+ RD + P I+ E +D + + L DE ALVG AE +
Sbjct: 151 GALDAPVFRDVHLPR--IEMLAGEGIDLFALETLPRLDEAQALVGAVEDLAAESECWVSF 208
Query: 505 RLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS---PLIEQLKTENIP 561
++ D H+++G + A + + ++AVGVNCV P +V+ P++ + T+ P
Sbjct: 209 QVRP-DGAHLADGTPLAEAAAWAADQ--ETVVAVGVNCVAPDVVARALPVLREATTK--P 263
Query: 562 LVVYPNSGERYD 573
LV YPNSG+ YD
Sbjct: 264 LVAYPNSGDLYD 275
>gi|452823158|gb|EME30171.1| homocysteine S-methyltransferase [Galdieria sulphuraria]
Length = 310
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 171/407 (42%), Gaps = 106/407 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
MA L+DGG +++L D+ G LWS+ L + + Q H +++AGA+I+ ++S
Sbjct: 1 MAPKLLLDGGLATELERKGFDLSIGK-LWSARLLDECPELIEQVHLSYLEAGANIITSSS 59
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQAS GF+ + Y L EA IRS +
Sbjct: 60 YQASFDGFL-------EEGYSLS-------------EAKELMIRSVQLCK---------- 89
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R + AT D +A S GPYGA L DGSEYRG
Sbjct: 90 ---------RARSTFQNFSPSAT--------------DCYVAASCGPYGAYLADGSEYRG 126
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLS 239
Y VS+ + +H R++ LV D +A ETIP +EAQ + L+ R++ + W+S
Sbjct: 127 CY--GVSKERLLSFHSSRLEVLVAQDPDFIAFETIPDIEEAQAIIELMTRKYFYIPFWIS 184
Query: 240 FSCKDDKHISNGESF-TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
C+++ ++ G S T V C N A+GVNCV P +SSLI ++
Sbjct: 185 IQCRNETEMACGTSIETIVPFLCSTTN---CFAIGVNCVPPQYISSLISIIR-------- 233
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
NQ LS S ++ YPNSGE Y+
Sbjct: 234 -------------------------------NQLLRLSLS-----TFIIAYPNSGEVYNP 257
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ W ++++ + +V LD +VGGCCRT +K+++
Sbjct: 258 LKKDW-NQEMKNSIQSWVDYMLDCDADVVGGCCRTTPLHIQLLKNQI 303
>gi|418960717|ref|ZP_13512604.1| homocysteine methyltransferase [Lactobacillus salivarius SMXD51]
gi|380344384|gb|EIA32730.1| homocysteine methyltransferase [Lactobacillus salivarius SMXD51]
Length = 307
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 65/303 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQ
Sbjct: 10 NPVVLDGAMSTPLEKLGADT--NNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ F E + + LIK +V ++A
Sbjct: 68 ANVQAF-EKVGYSEKEARNLIKKAVKIAQKA----------------------------- 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 ---RDDYENRT----------------------GKHNYIAGTIGPYGAYLANGSEYRGDY 132
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFS 241
+S ++H PRI+ LV AG DILAIET P E + LL+E +P QK ++S++
Sbjct: 133 --ELSAEEYQQFHLPRIEELVNAGVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYT 190
Query: 242 CKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
DD IS+G T + R + + Q+IAVG+NCV+ +V ++ +K + L+VY
Sbjct: 191 LSDDDTISDG---TPLPRAIHALEDYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVY 247
Query: 300 PNS 302
PNS
Sbjct: 248 PNS 250
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+G ILAIET P E + LL+E +P QK ++S++ ++ +P
Sbjct: 152 NAGVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 211
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 212 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 271
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + G ++GGCC T
Sbjct: 272 ELIPNWYEAGARIIGGCCTT 291
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 166 LDEVLAILELLKEKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 220
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 221 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
>gi|449898074|ref|ZP_21790402.1| homocysteine methyltransferase [Streptococcus mutans R221]
gi|449936823|ref|ZP_21804199.1| homocysteine methyltransferase [Streptococcus mutans 2ST1]
gi|450154198|ref|ZP_21877615.1| homocysteine methyltransferase [Streptococcus mutans 21]
gi|449165148|gb|EMB68171.1| homocysteine methyltransferase [Streptococcus mutans 2ST1]
gi|449238044|gb|EMC36831.1| homocysteine methyltransferase [Streptococcus mutans 21]
gi|449260370|gb|EMC57872.1| homocysteine methyltransferase [Streptococcus mutans R221]
Length = 316
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 177/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|409350909|ref|ZP_11233852.1| Homocysteine S-methyltransferase [Lactobacillus equicursoris CIP
110162]
gi|407877091|emb|CCK85910.1| Homocysteine S-methyltransferase [Lactobacillus equicursoris CIP
110162]
Length = 312
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 160/393 (40%), Gaps = 112/393 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L +G+ LW++ L D V Q H D+ KAGA I +TNSYQA++
Sbjct: 13 ILDGSMSTPLEA-MGEETSSD-LWTAKALVDHPDRVYQVHYDYFKAGARITITNSYQANL 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F ++ D + LIK S + IA++A
Sbjct: 71 PAFAKY-GYSEDEARDLIKKSAE-----IAIQA--------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +AT + +AGSVGPYGA L DG+EYRG+Y H
Sbjct: 98 ------RDDY----EQATGVHNY------------VAGSVGPYGAYLADGNEYRGNY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEA-QMLCRLLREWPHQKAWLSFSCKD 244
++ +H PRI LV+ GAD LAIET P +E +L + + +P ++SFS KD
Sbjct: 134 LTPEEYVNFHAPRIDELVQGGADCLAIETQPKLEEVLAILDYVQKTYPALAVYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ IS G S T+ A+ Q+ A GVNC++ I+ LK ++VYPNSG
Sbjct: 194 PQTISEGTSLTEAAQAVQKY--PQVFATGVNCMKLKWTVDAIKSLKGVTDSIIVYPNSGA 251
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W VYP +
Sbjct: 252 EYD---------------------PQVKKW-------------VYPPDAPDFGQAGP--- 274
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DW+ G +VGGCC D
Sbjct: 275 -------------DWVKAGATIVGGCCTVMPAD 294
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
L+E +A++ +TY +++ L D + IS G S T+ A+ Q+ A GV
Sbjct: 166 LEEVLAILDYVQKTYPALAVYVSFSLKD--PQTISEGTSLTEAAQAVQKY--PQVFATGV 221
Query: 541 NCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
NC++ I+ LK ++VYPNSG YD
Sbjct: 222 NCMKLKWTVDAIKSLKGVTDSIIVYPNSGAEYD 254
>gi|440703796|ref|ZP_20884712.1| homocysteine S-methyltransferase [Streptomyces turgidiscabies Car8]
gi|440274638|gb|ELP63158.1| homocysteine S-methyltransferase [Streptomyces turgidiscabies Car8]
Length = 312
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 152/391 (38%), Gaps = 116/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ D LWS+ L +A+V H + +AGAD+ +T+SYQA+
Sbjct: 28 VLDGGMSNQLGSAGHDLSD--ELWSARLLVEQPEAIVDAHLAYFEAGADVAITSSYQATF 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + K I E T +
Sbjct: 86 EG---------------------FAKRGIDRERTAGLL---------------------- 102
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
G VE EA R R + +A SVGPYGA L DGSEYRG Y
Sbjct: 103 -------GLSVELAREAARRTETR-------RPLWVAASVGPYGAMLADGSEYRGRYGLS 148
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPR++ L AG D+LA+ET+P EA L R +R WLS+S D
Sbjct: 149 VRE--LEAFHRPRVEVLAAAGPDVLALETVPDLDEADALLRAVRGL-GVPVWLSYSVAGD 205
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
+ G+ + D+++AVGVNC P V +E
Sbjct: 206 R-TRAGQPLEEA--FALAGEADEVVAVGVNCSVPEDVDGAVE------------------ 244
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
+ + P+VVYPNSGE +DA W
Sbjct: 245 -------------------------------LAARVTGKPVVVYPNSGEVWDADARAWTG 273
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
VT W D G L+GGCCR E
Sbjct: 274 SSTF--AAGQVTGWRDAGARLIGGCCRVGPE 302
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
D+++AVGVNC P V +E + P+VVYPNSGE +D
Sbjct: 224 DEVVAVGVNCSVPEDVDGAVELAARVTGKPVVVYPNSGEVWD 265
>gi|450164165|ref|ZP_21881166.1| homocysteine methyltransferase [Streptococcus mutans B]
gi|449242245|gb|EMC40843.1| homocysteine methyltransferase [Streptococcus mutans B]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENSSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KASQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|449875690|ref|ZP_21782362.1| homocysteine methyltransferase [Streptococcus mutans S1B]
gi|449892495|ref|ZP_21788499.1| homocysteine methyltransferase [Streptococcus mutans SF12]
gi|449975504|ref|ZP_21815818.1| homocysteine methyltransferase [Streptococcus mutans 11VS1]
gi|449984428|ref|ZP_21819055.1| homocysteine methyltransferase [Streptococcus mutans NFSM2]
gi|449989539|ref|ZP_21821119.1| homocysteine methyltransferase [Streptococcus mutans NVAB]
gi|450011043|ref|ZP_21828969.1| homocysteine methyltransferase [Streptococcus mutans A19]
gi|450023363|ref|ZP_21830560.1| homocysteine methyltransferase [Streptococcus mutans U138]
gi|450080961|ref|ZP_21851406.1| homocysteine methyltransferase [Streptococcus mutans N66]
gi|450121402|ref|ZP_21866301.1| homocysteine methyltransferase [Streptococcus mutans ST6]
gi|449176821|gb|EMB79148.1| homocysteine methyltransferase [Streptococcus mutans 11VS1]
gi|449180227|gb|EMB82395.1| homocysteine methyltransferase [Streptococcus mutans NFSM2]
gi|449182501|gb|EMB84525.1| homocysteine methyltransferase [Streptococcus mutans NVAB]
gi|449189826|gb|EMB91454.1| homocysteine methyltransferase [Streptococcus mutans A19]
gi|449193459|gb|EMB94841.1| homocysteine methyltransferase [Streptococcus mutans U138]
gi|449215722|gb|EMC15901.1| homocysteine methyltransferase [Streptococcus mutans N66]
gi|449229267|gb|EMC28591.1| homocysteine methyltransferase [Streptococcus mutans ST6]
gi|449253653|gb|EMC51599.1| homocysteine methyltransferase [Streptococcus mutans S1B]
gi|449256116|gb|EMC53950.1| homocysteine methyltransferase [Streptococcus mutans SF12]
Length = 316
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 177/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|449919499|ref|ZP_21797991.1| homocysteine methyltransferase [Streptococcus mutans 1SM1]
gi|449159410|gb|EMB62752.1| homocysteine methyltransferase [Streptococcus mutans 1SM1]
Length = 316
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEETEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTGIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTGIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|24379395|ref|NP_721350.1| homocysteine methyltransferase [Streptococcus mutans UA159]
gi|449865405|ref|ZP_21778963.1| homocysteine methyltransferase [Streptococcus mutans U2B]
gi|449869812|ref|ZP_21780306.1| homocysteine methyltransferase [Streptococcus mutans 8ID3]
gi|449884067|ref|ZP_21785483.1| homocysteine methyltransferase [Streptococcus mutans SA38]
gi|449914915|ref|ZP_21795915.1| homocysteine methyltransferase [Streptococcus mutans 15JP3]
gi|449924722|ref|ZP_21799842.1| homocysteine methyltransferase [Streptococcus mutans 4SM1]
gi|449950729|ref|ZP_21808382.1| homocysteine methyltransferase [Streptococcus mutans 11SSST2]
gi|449971294|ref|ZP_21814335.1| homocysteine methyltransferase [Streptococcus mutans 2VS1]
gi|450035196|ref|ZP_21834885.1| homocysteine methyltransferase [Streptococcus mutans M21]
gi|450040664|ref|ZP_21836947.1| homocysteine methyltransferase [Streptococcus mutans T4]
gi|450050888|ref|ZP_21840513.1| homocysteine methyltransferase [Streptococcus mutans NFSM1]
gi|450059611|ref|ZP_21843494.1| homocysteine methyltransferase [Streptococcus mutans NLML4]
gi|450077437|ref|ZP_21850437.1| homocysteine methyltransferase [Streptococcus mutans N3209]
gi|24377325|gb|AAN58656.1|AE014935_8 putative methyltransferase [Streptococcus mutans UA159]
gi|449157303|gb|EMB60747.1| homocysteine methyltransferase [Streptococcus mutans 15JP3]
gi|449157709|gb|EMB61145.1| homocysteine methyltransferase [Streptococcus mutans 8ID3]
gi|449162357|gb|EMB65498.1| homocysteine methyltransferase [Streptococcus mutans 4SM1]
gi|449167044|gb|EMB69952.1| homocysteine methyltransferase [Streptococcus mutans 11SSST2]
gi|449172289|gb|EMB74920.1| homocysteine methyltransferase [Streptococcus mutans 2VS1]
gi|449195835|gb|EMB97143.1| homocysteine methyltransferase [Streptococcus mutans M21]
gi|449198648|gb|EMB99753.1| homocysteine methyltransferase [Streptococcus mutans T4]
gi|449202305|gb|EMC03234.1| homocysteine methyltransferase [Streptococcus mutans NFSM1]
gi|449202928|gb|EMC03815.1| homocysteine methyltransferase [Streptococcus mutans NLML4]
gi|449211242|gb|EMC11656.1| homocysteine methyltransferase [Streptococcus mutans N3209]
gi|449249354|gb|EMC47489.1| homocysteine methyltransferase [Streptococcus mutans SA38]
gi|449264256|gb|EMC61602.1| homocysteine methyltransferase [Streptococcus mutans U2B]
Length = 316
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KASQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|449886598|ref|ZP_21786302.1| homocysteine methyltransferase [Streptococcus mutans SA41]
gi|449254050|gb|EMC51977.1| homocysteine methyltransferase [Streptococcus mutans SA41]
Length = 316
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKRIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KASQILALGINCSSPSVYSSLLKRIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKRIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|15609595|ref|NP_216974.1| Probable homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium tuberculosis
H37Rv]
gi|148662293|ref|YP_001283816.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|167969783|ref|ZP_02552060.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|306776728|ref|ZP_07415065.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu001]
gi|306972838|ref|ZP_07485499.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu010]
gi|307080544|ref|ZP_07489714.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu011]
gi|307085142|ref|ZP_07494255.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu012]
gi|397674360|ref|YP_006515895.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis H37Rv]
gi|148506445|gb|ABQ74254.1| homocysteine methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|308214888|gb|EFO74287.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu001]
gi|308357766|gb|EFP46617.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu010]
gi|308361711|gb|EFP50562.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu011]
gi|308365321|gb|EFP54172.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu012]
gi|395139265|gb|AFN50424.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis H37Rv]
gi|444895990|emb|CCP45251.1| Probable homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium tuberculosis
H37Rv]
Length = 302
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 67/303 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELAQA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGYY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 127 --GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNLVRRL-ATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGE 304
SGE
Sbjct: 241 SGE 243
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 47/156 (30%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA+ETIP EA+ L L+R AWLS++
Sbjct: 141 LEVLVDAGADMLALETIPDIDEAEALVNLVRRLAT-PAWLSYTINGTRTRAGQPLTDAFA 199
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWID-RDLC 369
C +++ P++VYPNSGE +D W+ R
Sbjct: 200 VAAGVPEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFS 259
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ +W+ G +VGGCCR D + L
Sbjct: 260 GSSGQLAREWVAAGARIVGGCCRVRPIDIAEIGRAL 295
>gi|450182408|ref|ZP_21888311.1| homocysteine methyltransferase [Streptococcus mutans 24]
gi|449244781|gb|EMC43142.1| homocysteine methyltransferase [Streptococcus mutans 24]
Length = 316
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|450158619|ref|ZP_21878935.1| homocysteine methyltransferase [Streptococcus mutans 66-2A]
gi|449242117|gb|EMC40720.1| homocysteine methyltransferase [Streptococcus mutans 66-2A]
Length = 316
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KASQILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|383825373|ref|ZP_09980523.1| homocysteine methyltransferase [Mycobacterium xenopi RIVM700367]
gi|383335103|gb|EID13535.1| homocysteine methyltransferase [Mycobacterium xenopi RIVM700367]
Length = 297
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 158/395 (40%), Gaps = 118/395 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V + DGG +++L D+ D PLWS+ L A + + H + +AGA I T SYQ
Sbjct: 9 TVLIGDGGLATELEARGHDLSD--PLWSARLLIDAPEEITAVHAAYFRAGAMIATTASYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + D + +L++ SV+ AIA + A R +A SVGPYG
Sbjct: 67 ASFDGFAA-RGIGRDDTVRLLRRSVELA--AIARDRVGANCR--------WVAASVGPYG 115
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A+L DGSEYRG Y +S A + WH
Sbjct: 116 AALADGSEYRGRY--GLSVAALEAWH---------------------------------- 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
RPR++ L EAGAD+LA+ET+P EA+ L ++R AWLS++
Sbjct: 140 -------------RPRLEVLAEAGADVLALETVPDIDEAEALVNVVRRL-AVPAWLSYTI 185
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
D + E A P +++AVGVNC P V + + P++VYPNS
Sbjct: 186 --DGTRTRAEQPLAEAFAVAAEVP-EIVAVGVNCCAPDDVLHAVAAARQTGKPVIVYPNS 242
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE R+D+
Sbjct: 243 GE--------------------------------------------------RWDSARRA 252
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W+ + P + W+ G +VGGCCR + D
Sbjct: 253 WVGQSRFSP--ELAPKWVSAGARIVGGCCRVHPAD 285
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
+++AVGVNC P V + + P++VYPNSGER+D
Sbjct: 208 EIVAVGVNCCAPDDVLHAVAAARQTGKPVIVYPNSGERWD 247
>gi|298525936|ref|ZP_07013345.1| homocysteine methyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|308377015|ref|ZP_07440877.2| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu008]
gi|298495730|gb|EFI31024.1| homocysteine methyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|308349196|gb|EFP38047.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu008]
Length = 300
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 67/303 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 5 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 62
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 63 ASFEGFAA-RGIGHDDATVLLRRSVELAQA----------------ARD-----EVGVGG 100
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 101 LS------------------------------------VAASVGPYGAALADGSEYRGCY 124
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 125 --GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNLVRRL-ATPAWLSYTI 181
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 182 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 238
Query: 302 SGE 304
SGE
Sbjct: 239 SGE 241
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 47/156 (30%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA+ETIP EA+ L L+R AWLS++
Sbjct: 139 LEVLVDAGADMLALETIPDIDEAEALVNLVRRLAT-PAWLSYTINGTRTRAGQPLTDAFA 197
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWID-RDLC 369
C +++ P++VYPNSGE +D W+ R
Sbjct: 198 VAAGVPEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFS 257
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ +W+ G +VGGCCR D + L
Sbjct: 258 GSSGQLAREWVAAGARIVGGCCRVRPIDIAEIGRAL 293
>gi|450044570|ref|ZP_21837938.1| homocysteine methyltransferase [Streptococcus mutans N34]
gi|450105817|ref|ZP_21860125.1| homocysteine methyltransferase [Streptococcus mutans SF14]
gi|449201537|gb|EMC02528.1| homocysteine methyltransferase [Streptococcus mutans N34]
gi|449223986|gb|EMC23643.1| homocysteine methyltransferase [Streptococcus mutans SF14]
Length = 316
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + L + + ++I +V K +AR
Sbjct: 73 QGLCNY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 48/145 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS--------------------- 338
+ G +LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 162 DEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELID 221
Query: 339 -----------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPV 372
C + ++ PLV YPNSGE YD + W D+ +
Sbjct: 222 KASQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTL 281
Query: 373 DKYVTDWLDEGVALVGGCCRTYAED 397
+ W G +VGGCCRT D
Sbjct: 282 LENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|31793639|ref|NP_856132.1| homocysteine methyltransferase [Mycobacterium bovis AF2122/97]
gi|121638341|ref|YP_978565.1| homocysteine methyltransferase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148823658|ref|YP_001288412.1| homocysteine methyltransferase [Mycobacterium tuberculosis F11]
gi|224990835|ref|YP_002645522.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798463|ref|YP_003031464.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
1435]
gi|254551506|ref|ZP_05141953.1| homocysteine methyltransferase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289443984|ref|ZP_06433728.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T46]
gi|289448101|ref|ZP_06437845.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CPHL_A]
gi|289570613|ref|ZP_06450840.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T17]
gi|289575152|ref|ZP_06455379.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
K85]
gi|289746240|ref|ZP_06505618.1| homocysteine methyltransferase [Mycobacterium tuberculosis 02_1987]
gi|289751064|ref|ZP_06510442.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T92]
gi|289754566|ref|ZP_06513944.1| homocysteine methyltransferase [Mycobacterium tuberculosis EAS054]
gi|289758590|ref|ZP_06517968.1| homocysteine methyltransferase [Mycobacterium tuberculosis T85]
gi|289762627|ref|ZP_06522005.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
GM 1503]
gi|294994434|ref|ZP_06800125.1| homocysteine methyltransferase [Mycobacterium tuberculosis 210]
gi|297635064|ref|ZP_06952844.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
4207]
gi|297732055|ref|ZP_06961173.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
R506]
gi|306780501|ref|ZP_07418838.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu002]
gi|306785253|ref|ZP_07423575.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu003]
gi|306789612|ref|ZP_07427934.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu004]
gi|306793939|ref|ZP_07432241.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu005]
gi|306798333|ref|ZP_07436635.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu006]
gi|306808779|ref|ZP_07445447.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu007]
gi|306968611|ref|ZP_07481272.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu009]
gi|313659391|ref|ZP_07816271.1| homocysteine methyltransferase [Mycobacterium tuberculosis KZN
V2475]
gi|339632486|ref|YP_004724128.1| homocysteine S-methyltransferase [Mycobacterium africanum GM041182]
gi|340627472|ref|YP_004745924.1| putative homocysteine S-methyltransferase [Mycobacterium canettii
CIPT 140010059]
gi|375295726|ref|YP_005099993.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 4207]
gi|378772193|ref|YP_005171926.1| homocysteine S-methyltransferase [Mycobacterium bovis BCG str.
Mexico]
gi|383308237|ref|YP_005361048.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB327]
gi|385991773|ref|YP_005910071.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5180]
gi|385995393|ref|YP_005913691.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5079]
gi|385999240|ref|YP_005917539.1| homocysteine methyltransferase [Mycobacterium tuberculosis CTRI-2]
gi|386005363|ref|YP_005923642.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB423]
gi|392387099|ref|YP_005308728.1| mmuM [Mycobacterium tuberculosis UT205]
gi|392431933|ref|YP_006472977.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 605]
gi|424804796|ref|ZP_18230227.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
W-148]
gi|424948129|ref|ZP_18363825.1| homocysteine methyltransferase [Mycobacterium tuberculosis
NCGM2209]
gi|433627591|ref|YP_007261220.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140060008]
gi|449064528|ref|YP_007431611.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Korea
1168P]
gi|31619232|emb|CAD97346.1| PROBABLE HOMOCYSTEINE S-METHYLTRANSFERASE MMUM
(S-METHYLMETHIONINE:HOMOCYSTEINE METHYLTRANSFERASE)
(CYSTEINE METHYLTRANSFERASE) [Mycobacterium bovis
AF2122/97]
gi|121493989|emb|CAL72466.1| Probable homocysteine S-methyltransferase mmuM [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148722185|gb|ABR06810.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
F11]
gi|224773948|dbj|BAH26754.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319966|gb|ACT24569.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 1435]
gi|289416903|gb|EFD14143.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T46]
gi|289421059|gb|EFD18260.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CPHL_A]
gi|289539583|gb|EFD44161.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
K85]
gi|289544367|gb|EFD48015.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T17]
gi|289686768|gb|EFD54256.1| homocysteine methyltransferase [Mycobacterium tuberculosis 02_1987]
gi|289691651|gb|EFD59080.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
T92]
gi|289695153|gb|EFD62582.1| homocysteine methyltransferase [Mycobacterium tuberculosis EAS054]
gi|289710133|gb|EFD74149.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
GM 1503]
gi|289714154|gb|EFD78166.1| homocysteine methyltransferase [Mycobacterium tuberculosis T85]
gi|308326649|gb|EFP15500.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu002]
gi|308330075|gb|EFP18926.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu003]
gi|308333915|gb|EFP22766.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu004]
gi|308337718|gb|EFP26569.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu005]
gi|308341399|gb|EFP30250.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu006]
gi|308344885|gb|EFP33736.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu007]
gi|308353817|gb|EFP42668.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
SUMu009]
gi|326904072|gb|EGE51005.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
W-148]
gi|328458231|gb|AEB03654.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 4207]
gi|339295347|gb|AEJ47458.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5079]
gi|339298966|gb|AEJ51076.1| homocysteine methyltransferase [Mycobacterium tuberculosis
CCDC5180]
gi|339331842|emb|CCC27545.1| putative homocysteine S-methyltransferase MMUM
(S-methylmethionine:homocysteine methyltransferase)
[Mycobacterium africanum GM041182]
gi|340005662|emb|CCC44828.1| putative homocysteine S-methyltransferase MMUM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140010059]
gi|341602379|emb|CCC65055.1| probable homocysteine S-methyltransferase mmuM [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344220287|gb|AEN00918.1| homocysteine methyltransferase [Mycobacterium tuberculosis CTRI-2]
gi|356594514|gb|AET19743.1| Homocysteine S-methyltransferase [Mycobacterium bovis BCG str.
Mexico]
gi|358232644|dbj|GAA46136.1| homocysteine methyltransferase [Mycobacterium tuberculosis
NCGM2209]
gi|378545650|emb|CCE37928.1| mmuM [Mycobacterium tuberculosis UT205]
gi|380722190|gb|AFE17299.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB327]
gi|380725851|gb|AFE13646.1| homocysteine methyltransferase [Mycobacterium tuberculosis RGTB423]
gi|392053342|gb|AFM48900.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
KZN 605]
gi|432155197|emb|CCK52443.1| Homocysteine S-methyltransferase MmuM
(S-methylmethionine:homocysteine methyltransferase)
(cysteine methyltransferase) [Mycobacterium canettii
CIPT 140060008]
gi|449033036|gb|AGE68463.1| homocysteine methyltransferase [Mycobacterium bovis BCG str. Korea
1168P]
Length = 302
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 67/303 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELAQA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGCY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA+ETIP EA+ L L+R AWLS++
Sbjct: 127 --GLSVAALMKWHLPRLEVLVDAGADMLALETIPDIDEAEALVNLVRRL-ATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGE 304
SGE
Sbjct: 241 SGE 243
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 47/156 (30%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA+ETIP EA+ L L+R AWLS++
Sbjct: 141 LEVLVDAGADMLALETIPDIDEAEALVNLVRRLAT-PAWLSYTINGTRTRAGQPLTDAFA 199
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWID-RDLC 369
C +++ P++VYPNSGE +D W+ R
Sbjct: 200 VAAGVPEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFS 259
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ +W+ G +VGGCCR D + L
Sbjct: 260 GSSGQLAREWVAAGARIVGGCCRVRPIDIAEIGRAL 295
>gi|333398672|ref|ZP_08480485.1| homocysteine methyltransferase [Leuconostoc gelidum KCTC 3527]
gi|406600228|ref|YP_006745574.1| homocysteine methyltransferase [Leuconostoc gelidum JB7]
gi|406371763|gb|AFS40688.1| homocysteine methyltransferase [Leuconostoc gelidum JB7]
Length = 309
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 174/397 (43%), Gaps = 114/397 (28%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+ V +IDGG S+L D+ + WS+ L + + + H+++ AGA + +T++Y
Sbjct: 10 SGVVVIDGGMGSELEKRQIDV--NNSWWSASALIQSPEDICDIHKNYFNAGASLAITDTY 67
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA I F + L +Y+LI S+V+ + LE ++ RSD LIAGSVGPY
Sbjct: 68 QAHIKSFTD-QGLSETKAYELIDSAVNLARHG--LENSN---RSDG-----LIAGSVGPY 116
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L +G+EY G+Y ++SE+ +H
Sbjct: 117 GAYLANGAEYTGNY--YLSESEFQAFH--------------------------------- 141
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSF 240
RPRI L+ G D+ A+ET+P +E + L LL +E+P A+LSF
Sbjct: 142 --------------RPRIARLIADGVDVFALETMPNFEETKALGHLLQQEFPSVDAYLSF 187
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYP 300
+ ++ H+ +G ++ Y + Q+ A+GVNC P +++ LK + P
Sbjct: 188 ATENGDHLWDGTPLSEA--VTYFESISQIKAIGVNCTSP---QNILPALKN------ITP 236
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N+ + I+ +PN +G+ YD
Sbjct: 237 NTSKKIIV-------------------YPN---------------------AGDDYDPET 256
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
RW+ + D+ V WL G +L+GGCCRT +D
Sbjct: 257 KRWVSQHGPIKWDELVPIWLAAGASLIGGCCRTSPDD 293
>gi|387786255|ref|YP_006251351.1| homocysteine methyltransferase [Streptococcus mutans LJ23]
gi|379132656|dbj|BAL69408.1| homocysteine methyltransferase [Streptococcus mutans LJ23]
Length = 316
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELI--DKALQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELI--DKALQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|449958284|ref|ZP_21809682.1| homocysteine methyltransferase [Streptococcus mutans 4VF1]
gi|450137207|ref|ZP_21871499.1| homocysteine methyltransferase [Streptococcus mutans NLML1]
gi|449170091|gb|EMB72824.1| homocysteine methyltransferase [Streptococcus mutans 4VF1]
gi|449235651|gb|EMC34600.1| homocysteine methyltransferase [Streptococcus mutans NLML1]
Length = 316
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 177/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+++LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSNLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|450133178|ref|ZP_21870487.1| homocysteine methyltransferase [Streptococcus mutans NLML8]
gi|449151750|gb|EMB55475.1| homocysteine methyltransferase [Streptococcus mutans NLML8]
Length = 316
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 175/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENSSIIQMIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ S + V++ IAL + A+ + ++
Sbjct: 73 QGLCDY------------GLSQEEVEKMIALTVSLAKNAREKVWQE-------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 107 ------------------LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|417787777|ref|ZP_12435460.1| homocysteine S-methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307954|gb|EGL98940.1| homocysteine S-methyltransferase [Lactobacillus salivarius NIAS840]
Length = 307
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 63/299 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQA+I
Sbjct: 13 VLDGAMSTPLERLGADT--NNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANI 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + + LIK +V ++A
Sbjct: 71 QAF-EKVGYSEKEARNLIKKAVKIAQKA-------------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 RDDYENR----------------------TGKHNYIAGTIGPYGAYLANGSEYRGDY--E 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
+S ++H PRI+ LV G DILAIET P E + LL +++P QK ++S++ D
Sbjct: 134 LSTKEYQQFHLPRIEELVTTGVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYTLSD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D IS+G S + + + Q+IAVG+NCV+ +V ++ +K + L+VYPNS
Sbjct: 194 DDTISDGTSLPRAIHALEDYS--QVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNS 250
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE +A++ + Y + +++ + L D D IS+G S + + + Q+IAVG+
Sbjct: 166 LDEVLAILELLKKKYPQQKVYVSYTLSD--DDTISDGTSLPRAIHALEDYS--QVIAVGI 221
Query: 541 NCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 222 NCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 47/139 (33%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP-------- 345
+G ILAIET P E + LL++ +P QK ++S++ ++ +P
Sbjct: 153 TGVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYTLSDDDTISDGTSLPRAIHALED 212
Query: 346 -------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVDK 374
L+VYPNS YD + W ++
Sbjct: 213 YSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFEE 272
Query: 375 YVTDWLDEGVALVGGCCRT 393
+ +W + G ++GGCC T
Sbjct: 273 LIPNWYEAGARIIGGCCTT 291
>gi|339258478|ref|XP_003369425.1| putative homocysteine S-methyltransferase [Trichinella spiralis]
gi|316966348|gb|EFV50941.1| putative homocysteine S-methyltransferase [Trichinella spiralis]
Length = 324
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 61/299 (20%)
Query: 45 HRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIR 104
+ F+K GADIV TN+YQA I + L + SY++++
Sbjct: 58 YSSFLKVGADIVQTNTYQACISRLQDVLGISIRESYEIVE-------------------- 97
Query: 105 SDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI---LI 161
Y ASL S +EH E D R+I +
Sbjct: 98 ----------------YAASLARRS------IEHFIE------------DNGRNINEYYV 123
Query: 162 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEA 221
AGSVGPY SL DGSEY G Y++ + + + +++ + A+ A D LA+ET+P+ EA
Sbjct: 124 AGSVGPYAVSLCDGSEYSGRYIQDTAVSEIRKYYHDQFCAMTMARVDFLALETMPSLTEA 183
Query: 222 QMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPL 280
++ +L E+ H W+SFSCKD+ + G+ F+ V Y ++ + AVG+NC +P
Sbjct: 184 KIALEVLSEYNHPPCWVSFSCKDEYRTNYGDLFSDVV---YEISRCPGVTAVGINCTKPD 240
Query: 281 MVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+S L++Q + +P VVYPNSG A + ++ + ++EW A + C
Sbjct: 241 FISGLLKQARNVLMPFVVYPNSGRWTRATGWVEPPYYSKPIGERVQEWIELGARIIGGC 299
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 48/132 (36%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN---------------------- 343
LA+ET+P+ EA++ +L E+ + W+SFSCK E
Sbjct: 171 FLALETMPSLTEAKIALEVLSEYNHPPCWVSFSCKDEYRTNYGDLFSDVVYEISRCPGVT 230
Query: 344 -----------------------IPLVVYPNSGERYDAVNARWIDRDL-CEPVDKYVTDW 379
+P VVYPNSG A W++ +P+ + V +W
Sbjct: 231 AVGINCTKPDFISGLLKQARNVLMPFVVYPNSGRWTRATG--WVEPPYYSKPIGERVQEW 288
Query: 380 LDEGVALVGGCC 391
++ G ++GGCC
Sbjct: 289 IELGARIIGGCC 300
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
+ AVG+NC +P +S L++Q + +P VVYPNSG
Sbjct: 229 VTAVGINCTKPDFISGLLKQARNVLMPFVVYPNSG 263
>gi|104773472|ref|YP_618452.1| homocysteine methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422553|emb|CAI97150.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 310
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 139/298 (46%), Gaps = 62/298 (20%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+SYQAS+
Sbjct: 15 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLP 72
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
FM+ L D++ LI+ S A+A++A DD ++ I
Sbjct: 73 AFMKH-GLSEDAARALIRESA-----AVAIKA------RDDFEKETGI------------ 108
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
H + AGSVGPYGA L DGSEYRGDY +
Sbjct: 109 ---------------------HNFV----------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|388496180|gb|AFK36156.1| unknown [Medicago truncatula]
Length = 238
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 139/254 (54%), Gaps = 44/254 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF+++L + D+ D PLWS+ L T+ V + H D++ +GA+I++T+SYQA+I
Sbjct: 14 IIDGGFATELERHGIDLND--PLWSAKCLFTSPHLVRRVHLDYLDSGANIILTSSYQATI 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + L++ SV+ +EA RDI Y
Sbjct: 72 QGF-EAKGFSKEEGQALLRRSVELAREA----------------RDIY-------YDRCT 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+D ++ D E +R +R ILIA SVG YGA L DGSEY GD +
Sbjct: 108 KDSFDFIRD-----------ERYR------SRPILIAASVGSYGAYLADGSEYTGDNGDA 150
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK-AWLSFSCKD 244
++ T+ ++HR R++ LV+AGAD++A ETIP +AQ LL E + AW SFSCKD
Sbjct: 151 ITVHTLKDFHRERVKILVDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKD 210
Query: 245 DKHISNGESFTQVA 258
+ ++++G+S + A
Sbjct: 211 ENNVASGDSILECA 224
>gi|386843290|ref|YP_006248348.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103591|gb|AEY92475.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796581|gb|AGF66630.1| homocysteine methyltransferase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 309
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 143/307 (46%), Gaps = 69/307 (22%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ D LWS+ LA +AV + H + AGA + +T+SY
Sbjct: 17 AGTVVLDGGMSNQLESAGHDLSD--ELWSARLLAERPEAVTEAHLAYYLAGASVAITSSY 74
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + + D + +L+ SV+ + D AR AG
Sbjct: 75 QATFEGFGKR-GIGRDEAARLLGLSVELAR---------------DAARKAQGAGV---- 114
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
R + +A SVGPYGA L DGSEYRG
Sbjct: 115 ----------------------------------PRPLWVAASVGPYGAMLADGSEYRGR 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V E + +HRPR++ L A D+LA+ET+P + EA L R +R AWLS++
Sbjct: 141 YGMSVDE--LERFHRPRMEVLAAAAPDVLALETVPDADEAAALLRAVRGL-GMPAWLSYT 197
Query: 242 CKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLV 297
+ + + E+F A + D++IAVGVNC P V +E + P+V
Sbjct: 198 VEGLRTRAGQPLEEAFGLAA------DADEVIAVGVNCCAPEDVRGAVEIAARVTGKPVV 251
Query: 298 VYPNSGE 304
VYPNSGE
Sbjct: 252 VYPNSGE 258
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 48/132 (36%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ET+P + EA L R +R AWLS++
Sbjct: 166 VLALETVPDADEAAALLRAVRGL-GMPAWLSYTVEGLRTRAGQPLEEAFGLAADADEVIA 224
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C E++ P+VVYPNSGE +DA W R + V W
Sbjct: 225 VGVNCCAPEDVRGAVEIAARVTGKPVVVYPNSGEAWDARARAWRGRTTFGA--EQVKAWR 282
Query: 381 DEGVALVGGCCR 392
+ G L+GGCCR
Sbjct: 283 EAGARLIGGCCR 294
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+ D++IAVGVNC P V +E + P+VVYPNSGE +D
Sbjct: 218 DADEVIAVGVNCCAPEDVRGAVEIAARVTGKPVVVYPNSGEAWD 261
>gi|227891294|ref|ZP_04009099.1| homocysteine methyltransferase [Lactobacillus salivarius ATCC
11741]
gi|227866872|gb|EEJ74293.1| homocysteine methyltransferase [Lactobacillus salivarius ATCC
11741]
Length = 307
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 65/303 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQ
Sbjct: 10 NPVVLDGAMSTPLERLGADT--NNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ F E + + LIK +V ++A
Sbjct: 68 ANVQAF-EKVGYSEKEARNLIKKAVKIAQKA----------------------------- 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 ---RDDYENRT----------------------GKHNYIAGTIGPYGAYLANGSEYRGDY 132
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFS 241
V E ++H PRI+ LV AG DILAIET P E + LL +++P QK ++S++
Sbjct: 133 ELSVEE--YQQFHLPRIEELVNAGVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYT 190
Query: 242 CKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
DD IS+G T + R + + Q+IAVG+NCV+ +V ++ +K + L+VY
Sbjct: 191 LSDDDTISDG---TPLPRAIHALEDYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVY 247
Query: 300 PNS 302
PNS
Sbjct: 248 PNS 250
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ + Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 166 LDEVLAILELLKKKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 220
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 221 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+G ILAIET P E + LL++ +P QK ++S++ ++ +P
Sbjct: 152 NAGVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 211
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 212 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 271
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + G ++GGCC T
Sbjct: 272 ELIPNWYEAGARIIGGCCTT 291
>gi|357388505|ref|YP_004903344.1| putative homocysteine S-methyltransferase [Kitasatospora setae
KM-6054]
gi|311894980|dbj|BAJ27388.1| putative homocysteine S-methyltransferase [Kitasatospora setae
KM-6054]
Length = 312
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 155/389 (39%), Gaps = 114/389 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG S++L+ D+ DG LWS+ L ++ HR + AGA + T SYQAS
Sbjct: 23 LLDGGLSNRLAEQGCDLSDG--LWSARLLLDEPGQLLAAHRAYFAAGAQVATTASYQASR 80
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF +D + +L+ SV+ AR+ +++ A L
Sbjct: 81 AGFAA-RGVDAAKTDRLLALSVEV-----------ARLAAEE-------------VSAEL 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG R +A SVGPYGA L DGSEYRG Y
Sbjct: 116 GDG----------------------------RPRWVAASVGPYGAVLADGSEYRGHY--G 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S A +AE+HRPR++AL AG D+LA+ET+P EA +L +R W SF D
Sbjct: 146 LSAAELAEFHRPRLEALAAAGPDVLAVETVPDLLEAAVLADCVRGL-GVPVWFSFGAA-D 203
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
GE ++V + + IAVGVNC P V + + + +P V YPNSGE
Sbjct: 204 GLTRGGEPLSEVFALVAEVP--ETIAVGVNCCAPREVDAAVALAAEVTGLPAVAYPNSGE 261
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
+DA W
Sbjct: 262 G--------------------------------------------------WDAAARDWT 271
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+P DW+ G LVGGCCR
Sbjct: 272 GEAAFDP--ALAADWVAAGARLVGGCCRV 298
>gi|326494804|dbj|BAJ94521.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527989|dbj|BAJ89046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 164/393 (41%), Gaps = 108/393 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T + + H +++AGA
Sbjct: 18 VIDGGFATQLEALGADIND--PLWSAACLITKPHLIKEVHMQYLEAGA------------ 63
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
D+ SSYQ + ++ + LE +R+ S+
Sbjct: 64 -------DVIISSSYQ--ATIPGFLARGLLLEEAEGLLRT------------------SV 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ E R ++ + + ++R L+A SVG YGA L DGSEY G Y +
Sbjct: 97 QLALEARDEFWKSTLRKSKPVYNR---------ALVAASVGSYGAYLADGSEYSGSYGDD 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
V+ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 148 VTAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEDIQVPSWICFSSVD 207
Query: 245 DKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPN 301
KH+ +GESF C + D++ VGVNC P V +I K + + VYPN
Sbjct: 208 GKHLCSGESFGD----CLEILNASDKVAIVGVNCTPPQFVEGIIRDFKKQTEKAIAVYPN 263
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVN 360
SGE W + K WL C + +DA+
Sbjct: 264 SGEV----------------------WDGRAKRWLPVECFGR-----------KSFDAMA 290
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R W + G +LVGGCCRT
Sbjct: 291 RR----------------WQEAGASLVGGCCRT 307
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 510 DDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYP 566
D KH+ +GESF C + D++ VGVNC P V +I K + + VYP
Sbjct: 207 DGKHLCSGESFGD----CLEILNASDKVAIVGVNCTPPQFVEGIIRDFKKQTEKAIAVYP 262
Query: 567 NSGERYD 573
NSGE +D
Sbjct: 263 NSGEVWD 269
>gi|375095873|ref|ZP_09742138.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora marina
XMU15]
gi|374656606|gb|EHR51439.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora marina
XMU15]
Length = 315
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 157/398 (39%), Gaps = 116/398 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D LWS+ LA A + VV HR F +AGA++ T SYQAS
Sbjct: 29 VLDGGVATELEARGHDLSDA--LWSARLLADAPEEVVSAHRAFFRAGANVATTASYQASF 86
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L++ SV+ K ARD
Sbjct: 87 TGFAA-RGIGPGQAAALLRRSVELAKR----------------ARD-------------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++DD R +A SVGPYGA L DGSEYRG Y
Sbjct: 116 ------------------------QVSDDVPR--WVAASVGPYGAVLADGSEYRGRY--G 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
VS +A +HRPR+ L EA D+LA+ET+P +EA+ L L E AWLS++ D
Sbjct: 148 VSRQKLAAFHRPRLDVLAEAEPDLLALETVPDVEEAEALLDAL-ESVGMPAWLSYTV-DG 205
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ + A PD ++AVGVNC P V+ +
Sbjct: 206 GRTRAGQPLEE-AFAVVAGRPD-IVAVGVNCCAPEEVADAV------------------- 244
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
+ + +T P++ YPNSG+ +D RW
Sbjct: 245 ------------------------------AIAGETTGKPVLAYPNSGQGWDPEVGRWTG 274
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
+ W GV VGGCCR D +
Sbjct: 275 TSRFRADE--AASWYARGVTAVGGCCRVPPADIAALSR 310
>gi|290956464|ref|YP_003487646.1| transferase [Streptomyces scabiei 87.22]
gi|260645990|emb|CBG69081.1| putative transferase [Streptomyces scabiei 87.22]
Length = 317
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 142/300 (47%), Gaps = 69/300 (23%)
Query: 9 GGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGF 68
GG S+QL + D+ D LWS+ LA + A+ + H + +AGA++ +T SYQA+ GF
Sbjct: 33 GGMSNQLESAGHDLSD--ELWSARLLAESPKAITEAHLAYFEAGANVAITASYQATFDGF 90
Query: 69 MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDG 128
+ +D D + +L+ S+ +A A T AR +L+A SVGPYGA L DG
Sbjct: 91 AK-RGIDGDRAAELMALSIGLAADAAAEAGTRGE------ARPLLVAASVGPYGAMLADG 143
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 188
SEYRG Y V+E
Sbjct: 144 SEYRGRYGLGVAE----------------------------------------------- 156
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHI 248
+ +HRPR++ L A D+LA+ETIP + EA+ L R +R AWLS++ D+
Sbjct: 157 --LERFHRPRLEVLAAARPDVLALETIPDTDEAEALLRAVRGL-DVPAWLSYTVAGDRTR 213
Query: 249 SNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ E+F A + ++++AVGVNC V IE ++ P+VVYPNSGE
Sbjct: 214 AGQPLEEAFALAA------DAEEIVAVGVNCCASEDVDGAIETAVRVTGKPVVVYPNSGE 267
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 48/145 (33%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ETIP + EA+ L R +R + AWLS++
Sbjct: 175 VLALETIPDTDEAEALLRAVRGL-DVPAWLSYTVAGDRTRAGQPLEEAFALAADAEEIVA 233
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C +E++ P+VVYPNSGE +DA W R + V W
Sbjct: 234 VGVNCCASEDVDGAIETAVRVTGKPVVVYPNSGETWDAAARSWTGRSTF--TTEQVLGWR 291
Query: 381 DEGVALVGGCCRTYAEDTLHMKHRL 405
G L+GGCCR E + L
Sbjct: 292 AAGARLIGGCCRVGPEAVSAIARTL 316
>gi|418034956|ref|ZP_12673422.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354691622|gb|EHE91541.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 310
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 137/298 (45%), Gaps = 62/298 (20%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+SYQAS+
Sbjct: 15 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITDSYQASLP 72
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
FM+ L D++ LI+ S A+A++A
Sbjct: 73 AFMKH-GLSEDAARALIRESA-----AVAIKA---------------------------- 98
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
R D+ + A AGSVGPYGA L DGSEYRGDY +
Sbjct: 99 -----RDDFEKETGIHNFA----------------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|291454931|ref|ZP_06594321.1| homocysteine methyltransferase [Streptomyces albus J1074]
gi|291357880|gb|EFE84782.1| homocysteine methyltransferase [Streptomyces albus J1074]
Length = 306
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 146/335 (43%), Gaps = 63/335 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S QL+ D+ D LWS+ LA A + VV HR + AGA++ +T SYQA+
Sbjct: 17 VVDGGLSEQLAARGNDLSD--ALWSARLLADAPEEVVAAHRAYYAAGAEVAITASYQATF 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + ++ +L+ SV + R+ D AR+ G GP
Sbjct: 75 EGFARR-GVGRVAAARLLGDSVGLAR------------RAADEAREA--DGVTGP----- 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ +A S GPYGA L DGSEYRG Y
Sbjct: 115 ---------------------------------LWVAASAGPYGAMLADGSEYRGRYGLS 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L AG D+LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 142 VAE--LERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYSVAGG 198
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ + + +++AVGVNC P V + P+V YPNSGE
Sbjct: 199 RTRAGDRLADA---FALAADAPEVVAVGVNCCDPREVEPAVRLAAHVTGKPVVAYPNSGE 255
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
A AQ L L EW A L C
Sbjct: 256 RWDAAARA-WRGPAQPLAGLAGEWVAAGARLVGGC 289
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 48/158 (30%)
Query: 284 SLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----- 338
S+ E + L V +G +LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 141 SVAELERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYSVAGGR 199
Query: 339 ---------------------------CKTENI-------------PLVVYPNSGERYDA 358
C + P+V YPNSGER+DA
Sbjct: 200 TRAGDRLADAFALAADAPEVVAVGVNCCDPREVEPAVRLAAHVTGKPVVAYPNSGERWDA 259
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W R +P+ +W+ G LVGGCCR A+
Sbjct: 260 AARAW--RGPAQPLAGLAGEWVAAGARLVGGCCRVGAQ 295
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+++AVGVNC P V P + P+V YPNSGER+D
Sbjct: 218 EVVAVGVNCCDPREVEPAVRLAAHVTGKPVVAYPNSGERWD 258
>gi|15841982|ref|NP_337019.1| homocysteine methyltransferase [Mycobacterium tuberculosis CDC1551]
gi|254232592|ref|ZP_04925919.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
C]
gi|254365234|ref|ZP_04981280.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
str. Haarlem]
gi|422813502|ref|ZP_16861877.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CDC1551A]
gi|13882256|gb|AAK46833.1| homocysteine S-methyltransferase [Mycobacterium tuberculosis
CDC1551]
gi|124601651|gb|EAY60661.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
C]
gi|134150748|gb|EBA42793.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
str. Haarlem]
gi|323718964|gb|EGB28114.1| homocysteine S-methyltransferase mmuM [Mycobacterium tuberculosis
CDC1551A]
gi|379028761|dbj|BAL66494.1| homocysteine methyltransferase [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|440581936|emb|CCG12339.1| putative HOMOCYSTEINE S-METHYLTRANSFERASE MMUM
(S-METHYLMETHIONINE:HOMOCYSTEINE METHYLTRANSFERASE)
(CYSTEINE METHYLTRANSFERASE) [Mycobacterium tuberculosis
7199-99]
Length = 302
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 67/303 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V + DGG +++L D+ D PLWS+ L A A+ H + +AGA I T SYQ
Sbjct: 7 SVLISDGGLATELEARGHDLSD--PLWSARLLVDAPHAITAVHTAYFRAGAQIATTASYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF + +D + L++ SV+ + ARD VG G
Sbjct: 65 ASFEGFAA-RGIGHDDATVLLRRSVELAQA----------------ARD-----EVGVGG 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S +A SVGPYGA+L DGSEYRG Y
Sbjct: 103 LS------------------------------------VAASVGPYGAALADGSEYRGCY 126
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+S A + +WH PR++ LV+AGAD+LA++TIP EA+ L L+R AWLS++
Sbjct: 127 --GLSVAALMKWHLPRLEVLVDAGADMLALKTIPDIDEAEALVNLVRRL-ATPAWLSYTI 183
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPN 301
+ G+ T + +++AVGVNC P ++ ++ + P++VYPN
Sbjct: 184 NGTR-TRAGQPLTDAFAVAAGV--PEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPN 240
Query: 302 SGE 304
SGE
Sbjct: 241 SGE 243
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 47/156 (30%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA++TIP EA+ L L+R AWLS++
Sbjct: 141 LEVLVDAGADMLALKTIPDIDEAEALVNLVRRLAT-PAWLSYTINGTRTRAGQPLTDAFA 199
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWID-RDLC 369
C +++ P++VYPNSGE +D W+ R
Sbjct: 200 VAAGVPEIVAVGVNCCAPDDVLPAIAFAVAHTGKPVIVYPNSGEGWDGRRRAWVGPRRFS 259
Query: 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ +W+ G +VGGCCR D + L
Sbjct: 260 GSSGQLAREWVAAGARIVGGCCRVRPIDIAEIGRAL 295
>gi|301299888|ref|ZP_07206121.1| putative Homocysteine S-methyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852493|gb|EFK80144.1| putative Homocysteine S-methyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 307
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 65/303 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQ
Sbjct: 10 NPVVLDGAMSTPLEKLGADT--NNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ F E + + LIK +V ++A
Sbjct: 68 ANVQAF-EKVGYSEKEARNLIKKAVKIAQKA----------------------------- 97
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 ---RDDYENRT----------------------GKHNYIAGTIGPYGAYLANGSEYRGDY 132
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFS 241
V E ++H PRI+ LV A DILAIET P E + LL+E +P QK ++S++
Sbjct: 133 ELSVEE--YQQFHLPRIEELVNAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYT 190
Query: 242 CKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
DD IS+G T + R + + Q+IAVG+NCV+ +V ++ +K + L+VY
Sbjct: 191 LSDDDTISDG---TPLPRAIHALEDYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVY 247
Query: 300 PNS 302
PNS
Sbjct: 248 PNS 250
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 166 LDEVLAILELLKEKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 220
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 221 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+ ILAIET P E + LL+E +P QK ++S++ ++ +P
Sbjct: 152 NAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 211
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 212 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 271
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + G ++GGCC T
Sbjct: 272 ELIPNWYEAGARIIGGCCTT 291
>gi|320534635|ref|ZP_08035080.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
gi|320133155|gb|EFW25658.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
Length = 325
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 161/392 (41%), Gaps = 112/392 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D + LWS+ L TA D V + H D++ AGA ++ TN+YQA++
Sbjct: 28 VLDGAMGTELDARGVDTRNA--LWSARALTTAPDLVREVHSDYLDAGARVITTNTYQATL 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
LI+S D AR ++ G+ A+
Sbjct: 86 --------------PALIRSGEDAAG-----------------ARRVIAVGARLAKEAAR 114
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
R G E+ P +L+AG +GPYGA L DGSEY G Y ++
Sbjct: 115 RFGEEH-----------------------PEESVLVAGGIGPYGAYLADGSEYTGAYDID 151
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK 243
+ E H PRI+ LV G + A+ETIP EAQ L +++ P + W+SF +
Sbjct: 152 IPEDPGFQEVHLPRIEVLVGEGIHLFALETIPRLDEAQALVAMVKGLAPRAECWVSFQVR 211
Query: 244 DD-KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
D +++G + A + + ++AVG+NCV P +V+ + L+ PL YPN
Sbjct: 212 SDGARLADGAPLAEAA--AWGAQEEMVVAVGINCVAPGVVARALPVLRAATGKPLAAYPN 269
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
+G+ P K W S +G+R
Sbjct: 270 AGDLYD---------------------PATKTWQS---------------TGDRAG---- 289
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ W+D GV LVGGCCRT
Sbjct: 290 ----------IPALAPSWIDAGVRLVGGCCRT 311
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D +++G + A + + ++AVG+NCV P +V+ + L+ PL YPN+
Sbjct: 213 DGARLADGAPLAEAA--AWGAQEEMVVAVGINCVAPGVVARALPVLRAATGKPLAAYPNA 270
Query: 569 GERYD 573
G+ YD
Sbjct: 271 GDLYD 275
>gi|254821426|ref|ZP_05226427.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
Length = 308
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 137/300 (45%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 15 LLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A R + A +L+A SVGPYGA+L
Sbjct: 73 EGFAA-RGLDRRETDLLLRRSVELAKAA----------RDEAGAAGLLVAASVGPYGAAL 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y +S +A WH
Sbjct: 122 ADGSEYRGRY--GLSVGALARWH------------------------------------- 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 143 ----------RPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 190
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 191 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGER 248
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 189 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSG 246
Query: 570 ERYD 573
ER+D
Sbjct: 247 ERWD 250
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 55/148 (37%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS---------------------- 338
++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 151 DAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFAVAAGV 209
Query: 339 ----------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDLCEPVD 373
C +++ P++VYPNSGER+D V R L
Sbjct: 210 DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGERWDGRAWVGPRTFATGL----- 264
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 265 --AAQWVSAGARIVGGCCRVGPVDIAEL 290
>gi|450098183|ref|ZP_21857865.1| homocysteine methyltransferase [Streptococcus mutans SF1]
gi|450169546|ref|ZP_21883043.1| homocysteine methyltransferase [Streptococcus mutans SM4]
gi|449221751|gb|EMC21508.1| homocysteine methyltransferase [Streptococcus mutans SF1]
gi|449247075|gb|EMC45364.1| homocysteine methyltransferase [Streptococcus mutans SM4]
Length = 316
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ + + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYPLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ G+D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEGSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|397649632|ref|YP_006490159.1| homocysteine methyltransferase [Streptococcus mutans GS-5]
gi|449908173|ref|ZP_21793549.1| homocysteine methyltransferase [Streptococcus mutans OMZ175]
gi|449980042|ref|ZP_21816963.1| homocysteine methyltransferase [Streptococcus mutans 5SM3]
gi|450115795|ref|ZP_21864107.1| homocysteine methyltransferase [Streptococcus mutans ST1]
gi|450126600|ref|ZP_21868282.1| homocysteine methyltransferase [Streptococcus mutans U2A]
gi|392603201|gb|AFM81365.1| homocysteine methyltransferase [Streptococcus mutans GS-5]
gi|449177449|gb|EMB79750.1| homocysteine methyltransferase [Streptococcus mutans 5SM3]
gi|449227609|gb|EMC27021.1| homocysteine methyltransferase [Streptococcus mutans ST1]
gi|449231386|gb|EMC30575.1| homocysteine methyltransferase [Streptococcus mutans U2A]
gi|449263140|gb|EMC60573.1| homocysteine methyltransferase [Streptococcus mutans OMZ175]
Length = 316
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|408410453|ref|ZP_11181666.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|408410674|ref|ZP_11181878.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|407875140|emb|CCK83684.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
gi|407875361|emb|CCK83472.1| Homocysteine S-methyltransferase [Lactobacillus sp. 66c]
Length = 312
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 159/393 (40%), Gaps = 112/393 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L +G+ LW++ L D V Q H D+ KAGA I +T+SYQA++
Sbjct: 13 ILDGSMSTPLEA-MGEETSSD-LWTAKALVDHPDRVYQVHYDYFKAGARITITDSYQANL 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F ++ D + LIK S + IA++A
Sbjct: 71 PAFAKY-GYSEDEARDLIKKSAE-----IAIQA--------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY +AT + +AGSVGPYGA L DG+EYRG+Y H
Sbjct: 98 ------RDDY----EQATGVHNY------------VAGSVGPYGAYLADGNEYRGNY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEA-QMLCRLLREWPHQKAWLSFSCKD 244
++ +H PRI LV+ G D LAIET P +E +L + + +P ++SFS KD
Sbjct: 134 LTPEEYVNFHAPRIDELVQGGVDCLAIETQPKLEEVLAILDYVQKTYPALDVYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ IS G S T+ A+ Q+ A GVNC++ I+ LK ++VYPNSG
Sbjct: 194 PQTISEGTSLTEAAQAVQKY--PQVFATGVNCMKLKWTVDAIKSLKEVTDSIIVYPNSGA 251
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W VYP +
Sbjct: 252 EYD---------------------PQVKKW-------------VYPPDAPDFGQAGP--- 274
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DW+ G +VGGCC D
Sbjct: 275 -------------DWVKAGATIVGGCCTVMPAD 294
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
L+E +A++ +TY +++ L D + IS G S T+ A+ Q+ A GV
Sbjct: 166 LEEVLAILDYVQKTYPALDVYVSFSLKD--PQTISEGTSLTEAAQAVQKY--PQVFATGV 221
Query: 541 NCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
NC++ I+ LK ++VYPNSG YD
Sbjct: 222 NCMKLKWTVDAIKSLKEVTDSIIVYPNSGAEYD 254
>gi|449931108|ref|ZP_21802177.1| homocysteine methyltransferase [Streptococcus mutans 3SN1]
gi|449163161|gb|EMB66274.1| homocysteine methyltransferase [Streptococcus mutans 3SN1]
Length = 316
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|449941189|ref|ZP_21805419.1| homocysteine methyltransferase [Streptococcus mutans 11A1]
gi|449152233|gb|EMB55944.1| homocysteine methyltransferase [Streptococcus mutans 11A1]
Length = 316
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 176/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALIELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|450145620|ref|ZP_21874652.1| homocysteine methyltransferase [Streptococcus mutans 1ID3]
gi|449149128|gb|EMB52943.1| homocysteine methyltransferase [Streptococcus mutans 1ID3]
Length = 316
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQMIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K A E + + V PY
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAKN--AREKVWQELSEKEK--------QVRPYP--- 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
LI+G VGPY A L DGSEY G+Y +
Sbjct: 119 ----------------------------------LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 48/140 (34%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS-------------------------- 338
+LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 167 LLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELIDKASQI 226
Query: 339 ------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVT 377
C + ++ PLV YPNSGE YD + W D+ + +
Sbjct: 227 LALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTLLENTK 286
Query: 378 DWLDEGVALVGGCCRTYAED 397
W G +VGGCCRT D
Sbjct: 287 IWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|339301303|ref|ZP_08650411.1| homocysteine S-methyltransferase [Streptococcus agalactiae ATCC
13813]
gi|319745302|gb|EFV97620.1| homocysteine S-methyltransferase [Streptococcus agalactiae ATCC
13813]
Length = 335
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 175/405 (43%), Gaps = 111/405 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + D+ LWS+ +L A+ H D+I+AGADIV T++YQA++
Sbjct: 36 ILHGALGTELESRGCDV--SGKLWSAKYLIEDPAAIQTIHEDYIRAGADIVTTSTYQATL 93
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + + + LI+ +V K A
Sbjct: 94 QGLAQ-VGVSESQAEDLIRLTVQLAKAA-------------------------------- 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYV 183
E V W L ++ + I LI+G VGPY A L DGSEY G Y
Sbjct: 121 ----------REQV-------WKSLTKEEKSERIYPLISGDVGPYAAFLADGSEYTGLY- 162
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSC 242
+ + + +HR RI+ L++ D+LA+ETIP ++EA+ L LL E +P +A++SF+
Sbjct: 163 -DIDKEDLKNFHRHRIELLLDEDVDLLALETIPNAQEAEALIELLAEDFPQVEAYMSFTS 221
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
+D K IS+G + +A+ N +P Q++A+G+NC P +V+ ++ + + N PLV YPN
Sbjct: 222 QDGKTISDGSAVAGLAKAI-NASP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPN 279
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD +
Sbjct: 280 SGE--------------------------------------------------VYDGASQ 289
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W D + + +DW G +VGGCCRT D + L
Sbjct: 290 SWQSSPDHSHTLLENTSDWQKLGAQVVGGCCRTRPADIADLSAHL 334
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D K IS+G + +A+ N +P Q++A+G+NC P +V+ ++ + + N PLV YPNS
Sbjct: 223 DGKTISDGSAVAGLAKAI-NASP-QVVALGINCSSPSLVADFLQAIAEQTNKPLVTYPNS 280
Query: 569 GERYD 573
GE YD
Sbjct: 281 GEVYD 285
>gi|284048701|ref|YP_003399040.1| Homocysteine S-methyltransferase [Acidaminococcus fermentans DSM
20731]
gi|283952922|gb|ADB47725.1| Homocysteine S-methyltransferase [Acidaminococcus fermentans DSM
20731]
Length = 317
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 159/395 (40%), Gaps = 107/395 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ +IDG + L D+ + LW++ LA + V Q H D+ +AGAD +T SYQ
Sbjct: 13 KILVIDGSMGTALENLGADL--NNSLWTARVLANRPELVKQVHLDYFRAGADAGITCSYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
ASI G + + +LI SV +EA
Sbjct: 71 ASIPGLVAN-GFTEQEAEELITRSVTIFQEA----------------------------- 100
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R ++ + +A W + +AG VGPYGA L DGSEYRG Y
Sbjct: 101 ---------RQEWWDREGKAAGRAW----------PLCLAG-VGPYGAYLADGSEYRGHY 140
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
VS + ++HR R + L +AGAD+L ET P+ +EA + + ++ W+SFSC
Sbjct: 141 --GVSREDLEKFHRRRAELLWQAGADVLLFETQPSLEEALVEVSIAKDL-GAAFWVSFSC 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
+D HI G + A P ++ A+GVNC +P + SLI +LKT + P+ VYPN
Sbjct: 198 RDGLHICEGTPIREAAAEVVRQFP-EVEALGVNCTKPEYLVSLIGELKTASDRPIFVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD V
Sbjct: 257 SGEE--------------------------------------------------YDPVTK 266
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W Y +++ G VGGCC T A+
Sbjct: 267 TWHGVGTDRKFGDYALEYMKAGAVAVGGCCTTVAD 301
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D HI G + A P+ + A+GVNC +P + LI +LKT + P+ VYPNS
Sbjct: 199 DGLHICEGTPIREAAAEVVRQFPE-VEALGVNCTKPEYLVSLIGELKTASDRPIFVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GEEYD 262
>gi|449904146|ref|ZP_21792525.1| homocysteine methyltransferase [Streptococcus mutans M230]
gi|449963846|ref|ZP_21811017.1| homocysteine methyltransferase [Streptococcus mutans 15VF2]
gi|449173129|gb|EMB75721.1| homocysteine methyltransferase [Streptococcus mutans 15VF2]
gi|449259828|gb|EMC57345.1| homocysteine methyltransferase [Streptococcus mutans M230]
Length = 316
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 48/140 (34%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS-------------------------- 338
+LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 167 LLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELIDKASQI 226
Query: 339 ------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVT 377
C + ++ PLV YPNSGE YD + W D+ + +
Sbjct: 227 LALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTLLENTK 286
Query: 378 DWLDEGVALVGGCCRTYAED 397
W G +VGGCCRT D
Sbjct: 287 IWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|450110805|ref|ZP_21862355.1| homocysteine methyltransferase [Streptococcus mutans SM6]
gi|449224579|gb|EMC24211.1| homocysteine methyltransferase [Streptococcus mutans SM6]
Length = 316
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 175/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|417809469|ref|ZP_12456150.1| homocysteine methyltransferase [Lactobacillus salivarius GJ-24]
gi|335350393|gb|EGM51889.1| homocysteine methyltransferase [Lactobacillus salivarius GJ-24]
Length = 307
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 146/300 (48%), Gaps = 65/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQA++
Sbjct: 13 VLDGAMSTPLERLGADT--NNDLWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + + LIK +V ++A
Sbjct: 71 QAF-EKVGYSEKEARNLIKKAVKIAQKA-------------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 RDDYENR----------------------TGKHNYIAGTIGPYGAYLANGSEYRGDYELS 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
V E ++H PRI+ LV A DILAIET P E + LL+E +P QK ++S++ D
Sbjct: 136 VEE--YQQFHLPRIEELVNAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSD 193
Query: 245 DKHISNGESFTQVARTCYNM-NPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D IS+G T + R + + + Q+IAVG+NCV+ +V ++ +K + L+VYPNS
Sbjct: 194 DDTISDG---TPLPRAIHALEDYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNS 250
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 166 LDEVLAILELLKEKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 220
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 221 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+ ILAIET P E + LL+E +P QK ++S++ ++ +P
Sbjct: 152 NAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 211
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 212 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 271
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + G ++GGCC T
Sbjct: 272 ELIPNWYEAGARIIGGCCTT 291
>gi|386587103|ref|YP_006083505.1| homocysteine S-methyltransferase [Streptococcus suis D12]
gi|353739249|gb|AER20257.1| homocysteine S-methyltransferase [Streptococcus suis D12]
Length = 315
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 113/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + G + G LWS+ +L + H+D+I+AGAD+V T++YQA+
Sbjct: 15 ILHGALGTELE-FRGHDVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E + L + +LI+ +VD KEA RD + A
Sbjct: 73 EGLAE-VGLSQAEAEELIRLTVDLAKEA----------------RDEVWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E ++ P LI+G VGPY A L +G+EY GDY +
Sbjct: 106 -----------------ELSEAEKVQRTYP----LISGDVGPYAAYLANGAEYTGDY-GN 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+S + + ++HR RI+ L+E A++LA+ETIP EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+ IS+G S ++A + +Q++AVG+NC P + + + QL+ + + P V YPNSG
Sbjct: 204 GQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 262 E--------------------------------------------------VYDGATQTW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGL 412
++ D + +W + G +VGGCCRT D + D V+GL
Sbjct: 272 KEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPAD-------IADLVAGL 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + IS+G S ++A + +Q++AVG+NC P + + QL+ + + P V YPNS
Sbjct: 203 DGQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEVYD 265
>gi|450070434|ref|ZP_21847568.1| homocysteine methyltransferase [Streptococcus mutans M2A]
gi|449213920|gb|EMC14243.1| homocysteine methyltransferase [Streptococcus mutans M2A]
Length = 316
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 175/395 (44%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTVQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|290580603|ref|YP_003484995.1| methyltransferase [Streptococcus mutans NN2025]
gi|450029484|ref|ZP_21832688.1| homocysteine methyltransferase [Streptococcus mutans G123]
gi|450067271|ref|ZP_21846525.1| homocysteine methyltransferase [Streptococcus mutans NLML9]
gi|450093754|ref|ZP_21856740.1| homocysteine methyltransferase [Streptococcus mutans W6]
gi|450148668|ref|ZP_21875726.1| homocysteine methyltransferase [Streptococcus mutans 14D]
gi|254997502|dbj|BAH88103.1| putative methyltransferase [Streptococcus mutans NN2025]
gi|449194410|gb|EMB95766.1| homocysteine methyltransferase [Streptococcus mutans G123]
gi|449208207|gb|EMC08824.1| homocysteine methyltransferase [Streptococcus mutans NLML9]
gi|449217020|gb|EMC17098.1| homocysteine methyltransferase [Streptococcus mutans W6]
gi|449235461|gb|EMC34418.1| homocysteine methyltransferase [Streptococcus mutans 14D]
Length = 316
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSIEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 48/140 (34%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS-------------------------- 338
+LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 167 LLALETIPNFLEAQALVELLQEEFPSIEAYMSFTAQNGTTISDGTAIEEVAELIDKASQI 226
Query: 339 ------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVT 377
C + ++ PLV YPNSGE YD + W D+ + +
Sbjct: 227 LALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTLLENTK 286
Query: 378 DWLDEGVALVGGCCRTYAED 397
W G +VGGCCRT D
Sbjct: 287 IWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|253754499|ref|YP_003027640.1| homocysteine methyltransferase [Streptococcus suis P1/7]
gi|386578829|ref|YP_006075235.1| homocysteine methyltransferase [Streptococcus suis GZ1]
gi|386580898|ref|YP_006077303.1| homocysteine S-methyltransferase [Streptococcus suis JS14]
gi|386582981|ref|YP_006079385.1| homocysteine S-methyltransferase [Streptococcus suis SS12]
gi|386589102|ref|YP_006085503.1| homocysteine S-methyltransferase [Streptococcus suis A7]
gi|403062437|ref|YP_006650653.1| homocysteine methyltransferase [Streptococcus suis S735]
gi|251820745|emb|CAR47507.1| homocysteine S-methyltransferase [Streptococcus suis P1/7]
gi|292559292|gb|ADE32293.1| homocysteine methyltransferase [Streptococcus suis GZ1]
gi|319759090|gb|ADV71032.1| homocysteine S-methyltransferase [Streptococcus suis JS14]
gi|353735127|gb|AER16137.1| homocysteine S-methyltransferase [Streptococcus suis SS12]
gi|354986263|gb|AER45161.1| homocysteine S-methyltransferase [Streptococcus suis A7]
gi|402809763|gb|AFR01255.1| homocysteine methyltransferase [Streptococcus suis S735]
Length = 315
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 113/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + G + G LWS+ +L + H+D+I+AGAD+V T++YQA+
Sbjct: 15 ILHGALGTELE-FRGHDVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E + L + +LI+ +VD KEA RD + A
Sbjct: 73 EGLAE-VGLSQAEAEELIRLTVDLAKEA----------------RDEVWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E ++ P LI+G VGPY A L +G+EY GDY +
Sbjct: 106 -----------------ELSEAEKVQRTYP----LISGDVGPYAAYLANGAEYTGDY-GN 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+S + + ++HR RI+ L+E A++LA+ETIP EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+ IS+G S ++A + +Q++AVG+NC P + + + QL+ + + P V YPNSG
Sbjct: 204 GQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 262 E--------------------------------------------------VYDGATQTW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGL 412
++ D + +W + G +VGGCCRT D + D V+GL
Sbjct: 272 KEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPAD-------IADLVAGL 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + IS+G S ++A + +Q++AVG+NC P + + QL+ + + P V YPNS
Sbjct: 203 DGQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEVYD 265
>gi|366052165|ref|ZP_09449887.1| homocysteine methyltransferase [Lactobacillus suebicus KCTC 3549]
Length = 308
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 153/336 (45%), Gaps = 70/336 (20%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DG +++L G ID + LWS+ L AV H + AGA I TN+YQA++
Sbjct: 19 DGAMATELEKR-GVQID-NELWSATALLKDPGAVQAVHESYFFAGASIATTNTYQANLPV 76
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F +F +++D LI+ +V + A+A DD LIAGSVGPYGA L D
Sbjct: 77 FADF-GINHDDGVALIEQAVILAQHAVA---------GDDSK---LIAGSVGPYGAYLAD 123
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
GSEY GDY +S+ ++H
Sbjct: 124 GSEYTGDY--SLSKQEYQDFH--------------------------------------- 142
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD-D 245
RPR+QAL +AG D A ET+P +E + L LL E+P AWLSFS D
Sbjct: 143 --------RPRMQALYDAGVDFFAFETMPNFEETKALVELLTNEFPTMTAWLSFSIGDRT 194
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSGE 304
+ +G T+ T Y + D +IAVGVNC +++ I ++ + +VVYPN+G+
Sbjct: 195 DKLCDGTELTKA--TEYFNDNDNVIAVGVNCTNLTNITAAINRIDDVTDKAIVVYPNNGD 252
Query: 305 -HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+ +T +A L+ EW N A + C
Sbjct: 253 IYDSDTKTWRTGIDAPTFTDLVPEWINAGAQIIGGC 288
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 48/158 (30%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLL-REWPNQKAWLSFSC--KTENI------------- 344
++G A ET+P +E + L LL E+P AWLSFS +T+ +
Sbjct: 151 DAGVDFFAFETMPNFEETKALVELLTNEFPTMTAWLSFSIGDRTDKLCDGTELTKATEYF 210
Query: 345 --------------------------------PLVVYPNSGERYDAVNARWIDRDLCEPV 372
+VVYPN+G+ YD+ W
Sbjct: 211 NDNDNVIAVGVNCTNLTNITAAINRIDDVTDKAIVVYPNNGDIYDSDTKTWRTGIDAPTF 270
Query: 373 DKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
V +W++ G ++GGCCRT +D ++ ++++++
Sbjct: 271 TDLVPEWINAGAQIIGGCCRTTPDDIAEIQRSVNEFLN 308
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
+E ALV + T + + D DK + +G T+ T Y + D +IAVGV
Sbjct: 165 FEETKALVELLTNEFPTMTAWLSFSIGDRTDK-LCDGTELTKA--TEYFNDNDNVIAVGV 221
Query: 541 NCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
NC ++ I ++ + +VVYPN+G+ YD
Sbjct: 222 NCTNLTNITAAINRIDDVTDKAIVVYPNNGDIYD 255
>gi|450063441|ref|ZP_21844907.1| homocysteine methyltransferase [Streptococcus mutans NLML5]
gi|450086507|ref|ZP_21853702.1| homocysteine methyltransferase [Streptococcus mutans NV1996]
gi|450176007|ref|ZP_21885528.1| homocysteine methyltransferase [Streptococcus mutans SM1]
gi|449204738|gb|EMC05524.1| homocysteine methyltransferase [Streptococcus mutans NLML5]
gi|449219465|gb|EMC19432.1| homocysteine methyltransferase [Streptococcus mutans NV1996]
gi|449245921|gb|EMC44242.1| homocysteine methyltransferase [Streptococcus mutans SM1]
Length = 316
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 48/140 (34%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS-------------------------- 338
+LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 167 LLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELIDKASQI 226
Query: 339 ------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVT 377
C + ++ PLV YPNSGE YD + W D+ + +
Sbjct: 227 LALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTLLENTK 286
Query: 378 DWLDEGVALVGGCCRTYAED 397
W G +VGGCCRT D
Sbjct: 287 IWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|227810129|ref|ZP_03989042.1| homocysteine methyltransferase [Acidaminococcus sp. D21]
gi|352684792|ref|YP_004896777.1| homocysteine methyltransferase [Acidaminococcus intestini RyC-MR95]
gi|226904709|gb|EEH90627.1| homocysteine methyltransferase [Acidaminococcus sp. D21]
gi|350279447|gb|AEQ22637.1| homocysteine methyltransferase [Acidaminococcus intestini RyC-MR95]
Length = 320
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 166/395 (42%), Gaps = 107/395 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ +IDG + L ++ + LW++ L + V + H D+ AGAD +T SYQ
Sbjct: 13 QICVIDGSMGTALEHLGANL--NNSLWTARVLLDQPELVKKVHLDYFHAGADAGITCSYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+I G M A S+ A D+++
Sbjct: 71 ATIPGLM-------------------------------ANGLSEKEAEDLIVR------- 92
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S++ E R ++ E +A D A + +AG +GPYGA L DGSEY+G Y
Sbjct: 93 -SVKVFQEARNEWWEKEGKAA----------DRAYPMCLAG-IGPYGAYLADGSEYKGHY 140
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ +A + ++H+ R + L EAGAD+L ET P+ EA++ + E W+SFSC
Sbjct: 141 --GIPDAALHDFHQRRAELLWEAGADVLLFETQPSLGEAKIEA-AIAERLGADYWISFSC 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
KD HI+ G+ A + P +L A+GVNC +P + SLI++L E ++P+VVYPN
Sbjct: 198 KDGLHINEGDLIRDCAAAFRSGYP-RLRALGVNCTKPEYLESLIKELGKETDLPIVVYPN 256
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE YD V
Sbjct: 257 SGE--------------------------------------------------TYDPVTK 266
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
W + Y +++ G VGGCC T +E
Sbjct: 267 TWNGKGDGHSFKDYARTYMEAGARAVGGCCTTVSE 301
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HI+ G+ A + P +L A+GVNC +P + LI++L E ++P+VVYPNS
Sbjct: 199 DGLHINEGDLIRDCAAAFRSGYP-RLRALGVNCTKPEYLESLIKELGKETDLPIVVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GETYD 262
>gi|379753791|ref|YP_005342463.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804007|gb|AFC48142.1| homocysteine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 308
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 137/300 (45%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 15 VLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A R + A +L+A SVGPYGA+L
Sbjct: 73 EGFAA-RGLDRRETDLLLRRSVELAKAA----------RDEAGAAGLLVAASVGPYGAAL 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y +S +A WH
Sbjct: 122 ADGSEYRGRY--GLSVGALARWH------------------------------------- 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 143 ----------RPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 190
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 191 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGER 248
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 189 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSG 246
Query: 570 ERYD 573
ER+D
Sbjct: 247 ERWD 250
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 55/148 (37%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS---------------------- 338
++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 151 DAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFAVAAGV 209
Query: 339 ----------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDLCEPVD 373
C +++ P++VYPNSGER+D V R L
Sbjct: 210 DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGERWDGRAWVGPRTFATGL----- 264
Query: 374 KYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 265 --AAQWVSAGARIVGGCCRVGPVDIAEL 290
>gi|379746514|ref|YP_005337335.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
gi|378798878|gb|AFC43014.1| homocysteine methyltransferase [Mycobacterium intracellulare ATCC
13950]
Length = 314
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 137/300 (45%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D LWS+ LA A +V H + +AGA I T SYQAS
Sbjct: 15 VLDGGLATELEARGHDLSD--RLWSARLLADAPREIVAVHAAYFRAGATIATTASYQASF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF LD + L++ SV+ K A R + A +L+A SVGPYGA+L
Sbjct: 73 EGFAAR-GLDRRETDLLLRRSVELAKAA----------RDEAGAAGLLVAASVGPYGAAL 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y +S +A WH
Sbjct: 122 ADGSEYRGRY--GLSVGALARWH------------------------------------- 142
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR++ L +AGAD+LA ET+P EA+ L ++R AWLS++ D
Sbjct: 143 ----------RPRLETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTI-DG 190
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
G+ T+ + D+++AVGVNC P V I P++VYPNSGE
Sbjct: 191 ARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGER 248
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D G+ T+ + D+++AVGVNC P V P I P++VYPNSG
Sbjct: 189 DGARTRAGQPLTEAFAVAAGV--DEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSG 246
Query: 570 ERYD 573
ER+D
Sbjct: 247 ERWD 250
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 55/153 (35%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L ++G +LA ET+P EA+ L ++R AWLS++
Sbjct: 146 LETLADAGADVLACETVPDVDEAEALVDVVRS-VGMPAWLSYTIDGARTRAGQPLTEAFA 204
Query: 339 ---------------CKTENI------------PLVVYPNSGERYDA---VNARWIDRDL 368
C +++ P++VYPNSGER+D V R L
Sbjct: 205 VAAGVDEIVAVGVNCCAPDDVLPAIASASEIGKPVIVYPNSGERWDGRAWVGPRTFATGL 264
Query: 369 CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
W+ G +VGGCCR D +
Sbjct: 265 -------AAQWVSAGARIVGGCCRVGPVDIAEL 290
>gi|421738973|ref|ZP_16177307.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptomyces sp. SM8]
gi|406692624|gb|EKC96311.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Streptomyces sp. SM8]
Length = 444
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 136/301 (45%), Gaps = 62/301 (20%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S QL+ D+ D LWS+ LA A VV HR + AGA++ +T SYQA+
Sbjct: 2 VVDGGLSEQLAARGNDLSDA--LWSARLLADAPGEVVAAHRAYYAAGAEVAITASYQATF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + ++ +L+ SV + R+ D AR+ G GP
Sbjct: 60 EGFAR-RGVGRVAAARLLGDSVGLAR------------RAADEAREA--DGMTGP----- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ +A S GPYGA L DGSEYRG Y
Sbjct: 100 ---------------------------------LWVAASAGPYGAMLADGSEYRGRYGLS 126
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L AG D+LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 127 VAE--LERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYSVAGG 183
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ + A +++AVGVNC P V + + P+V YPNSGE
Sbjct: 184 RTRAGDRLADAFALAADA---PEVVAVGVNCCDPREVEPAVRLAARVTGKPVVAYPNSGE 240
Query: 305 H 305
Sbjct: 241 R 241
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+++AVGVNC P V P + + P+V YPNSGER+D
Sbjct: 203 EVVAVGVNCCDPREVEPAVRLAARVTGKPVVAYPNSGERWD 243
>gi|239991425|ref|ZP_04712089.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
11379]
Length = 325
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 157/411 (38%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL D+ D LWS+ LA A + + H +++AGA +++T SY
Sbjct: 15 AGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASY 72
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + LD + L SV+ + A P R +A SVGPY
Sbjct: 73 QATFEGFGRY-GLDRSGTEALFARSVELARSAADAARRAG------PGRKTWVAASVGPY 125
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E
Sbjct: 126 GAMLADGSEYRGRYGLSVGE---------------------------------------- 145
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE--WPHQKAWLS 239
+ +HRPR+ AL AG D+LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 146 ---------LERFHRPRVAALAAAGPDVLALETVPDLDEAEALVRVAEETGLPY---WLS 193
Query: 240 FSCKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIP 295
+S + + E+F A + ++AVGVNC P + +E + P
Sbjct: 194 YSVAGGRTRAGQPLEEAFAVAA------GRESVLAVGVNCCDPDEAQAAVELAVAVTGRP 247
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 248 AVVYPNSGEG-------------------------------------------------- 257
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W R +P V W G LVGGCCR + + +L+
Sbjct: 258 WDAGARGWTGRSTFDP--DRVRAWTRAGARLVGGCCRVGPDLIAELAGQLE 306
>gi|146319678|ref|YP_001199390.1| homocysteine methyltransferase [Streptococcus suis 05ZYH33]
gi|146321872|ref|YP_001201583.1| homocysteine methyltransferase [Streptococcus suis 98HAH33]
gi|253752673|ref|YP_003025814.1| homocysteine methyltransferase [Streptococcus suis SC84]
gi|145690484|gb|ABP90990.1| putative methyltransferase [Streptococcus suis 05ZYH33]
gi|145692678|gb|ABP93183.1| putative methyltransferase [Streptococcus suis 98HAH33]
gi|251816962|emb|CAZ52611.1| homocysteine S-methyltransferase [Streptococcus suis SC84]
Length = 315
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 185/410 (45%), Gaps = 113/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + G + G LWS+ +L + H+D+I+AGAD+V T++YQA+
Sbjct: 15 ILHGALGTELE-FRGHDVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E + L + +LI+ +VD KEA RD + A
Sbjct: 73 EGLAE-VGLSQAEAEELIRWTVDLAKEA----------------RDEVWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E ++ P LI+G VGPY A L +G+EY GDY +
Sbjct: 106 -----------------ELSEAEKVQRTYP----LISGDVGPYAAYLANGAEYTGDY-GN 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+S + + ++HR RI+ L+E A++LA+ETIP EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ISLSELKDFHRRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+ IS+G S ++A + +Q++AVG+NC P + + + QL+ + + P V YPNSG
Sbjct: 204 GQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 262 E--------------------------------------------------VYDGATQTW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGL 412
++ D + +W + G +VGGCCRT D + D V+GL
Sbjct: 272 KEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPAD-------IADLVAGL 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + IS+G S ++A + +Q++AVG+NC P + + QL+ + + P V YPNS
Sbjct: 203 DGQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEVYD 265
>gi|429200514|ref|ZP_19192200.1| homocysteine S-methyltransferase [Streptomyces ipomoeae 91-03]
gi|428663781|gb|EKX63118.1| homocysteine S-methyltransferase [Streptomyces ipomoeae 91-03]
Length = 309
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 139/300 (46%), Gaps = 63/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ D LWS+ LA +A+ + H + AGAD+ +T+SYQA+
Sbjct: 22 VLDGGMSNQLESAGHDLSD--ELWSARLLAEQPEAITEAHLAYYLAGADVAITSSYQATF 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + ++ + + +L+ SV
Sbjct: 80 EGFAKR-GIEREKAAELLALSV-------------------------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E +AT W + +T R + +A SVGPYGA L DGSEYRG Y
Sbjct: 101 -----------ELALDATEQAWAKGVT----RPLYVAASVGPYGAMLADGSEYRGRYGLS 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L G D LA+ETIP + EA+ L R +R WLS+S D
Sbjct: 146 VAE--LEAFHRPRLEVLAAVGPDALALETIPDTDEAEALLRAVRGL-GVPVWLSYSIAAD 202
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ + A ++IAVGVNC P V +E + P VVYPNSGE
Sbjct: 203 RTRAGQPLEEAFALAAEAE---EVIAVGVNCCSPEDVDGAVEIAARVTGKPPVVYPNSGE 259
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 53/146 (36%), Gaps = 48/146 (32%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V G LA+ETIP + EA+ L R +R WLS+S
Sbjct: 157 LEVLAAVGPDALALETIPDTDEAEALLRAVRGL-GVPVWLSYSIAADRTRAGQPLEEAFA 215
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCE 370
C E++ P VVYPNSGE +DA W R
Sbjct: 216 LAAEAEEVIAVGVNCCSPEDVDGAVEIAARVTGKPPVVYPNSGEAWDASARAWTGRSTF- 274
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAE 396
+ V W G L+GGCCR E
Sbjct: 275 -TAEQVEGWRAAGARLIGGCCRVGPE 299
>gi|291448422|ref|ZP_06587812.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
15998]
gi|291351369|gb|EFE78273.1| homocysteine methyltransferase [Streptomyces roseosporus NRRL
15998]
Length = 323
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 157/411 (38%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL D+ D LWS+ LA A + + H +++AGA +++T SY
Sbjct: 13 AGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + LD + L SV+ + A P R +A SVGPY
Sbjct: 71 QATFEGFGRY-GLDRSGTEALFARSVELARSAADAARRAG------PGRKTWVAASVGPY 123
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E
Sbjct: 124 GAMLADGSEYRGRYGLSVGE---------------------------------------- 143
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE--WPHQKAWLS 239
+ +HRPR+ AL AG D+LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 144 ---------LERFHRPRVAALAAAGPDVLALETVPDLDEAEALVRVAEETGLPY---WLS 191
Query: 240 FSCKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIP 295
+S + + E+F A + ++AVGVNC P + +E + P
Sbjct: 192 YSVAGGRTRAGQPLEEAFAVAA------GRESVLAVGVNCCDPDEAQAAVELAVAVTGRP 245
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 246 AVVYPNSGEG-------------------------------------------------- 255
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W R +P V W G LVGGCCR + + +L+
Sbjct: 256 WDAGARGWTGRSTFDP--DRVRAWTRAGARLVGGCCRVGPDLIAELAGQLE 304
>gi|345002614|ref|YP_004805468.1| homocysteine S-methyltransferase [Streptomyces sp. SirexAA-E]
gi|344318240|gb|AEN12928.1| homocysteine S-methyltransferase [Streptomyces sp. SirexAA-E]
Length = 308
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 136/303 (44%), Gaps = 74/303 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA A + H +++AGA +++T SYQA+
Sbjct: 22 VLDGGLSNQLRAQGCDLSD--ALWSARLLADAPQQIEAAHAAYVRAGAQVLITASYQATF 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + + + +L+ SV+ + A + R++ +A SVGPYGA L
Sbjct: 80 DGF-ERRGIGREGAAELMAGSVELARRA-----------AGRSGREVWVAASVGPYGAML 127
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y V E
Sbjct: 128 ADGSEYRGRYGLTVRE-------------------------------------------- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +HRPRI+AL EA D LA+ET+P + EA+ + +R WLS++ +
Sbjct: 144 -----LERFHRPRIEALAEAAPDALALETVPDTDEAEAMLGAVRGC-GLPVWLSYTVAGE 197
Query: 246 KHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + ++F A DQ++AVGVNC P +E P+VVYPN
Sbjct: 198 RTRAGQPLADAFALAA------GEDQVVAVGVNCCDPADADRAVEVAAAVTGKPVVVYPN 251
Query: 302 SGE 304
SGE
Sbjct: 252 SGE 254
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 127/303 (41%), Gaps = 73/303 (24%)
Query: 96 LEATHAR-IRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE--ATMAEWHRLIT 152
+EA HA +R+ +LI S Y A+ DG E RG E +E A E R
Sbjct: 55 IEAAHAAYVRAGA---QVLITAS---YQATF-DGFERRGIGREGAAELMAGSVELARRAA 107
Query: 153 DDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAI 212
R++ +A SVGPYGA L DGSEYRG Y V E + +HRPRI+AL EA D LA+
Sbjct: 108 GRSGREVWVAASVGPYGAMLADGSEYRGRYGLTVRE--LERFHRPRIEALAEAAPDALAL 165
Query: 213 ETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISN---GESFTQVARTCYNMNPDQL 269
ET+P + EA+ + +R WLS++ ++ + ++F A DQ+
Sbjct: 166 ETVPDTDEAEAMLGAVRGC-GLPVWLSYTVAGERTRAGQPLADAFALAA------GEDQV 218
Query: 270 IAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWP 329
+AVGVNC P +E
Sbjct: 219 VAVGVNCCDPADADRAVE------------------------------------------ 236
Query: 330 NQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGG 389
+ P+VVYPNSGE +DA W + + W G LVGG
Sbjct: 237 -------VAAAVTGKPVVVYPNSGEIWDAAARGWAGQGTFDAA--RAGGWRRAGARLVGG 287
Query: 390 CCR 392
CCR
Sbjct: 288 CCR 290
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
DQ++AVGVNC P +E P+VVYPNSGE +D
Sbjct: 216 DQVVAVGVNCCDPADADRAVEVAAAVTGKPVVVYPNSGEIWD 257
>gi|332639105|ref|ZP_08417968.1| homocysteine methyltransferase [Weissella cibaria KACC 11862]
Length = 318
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 169/405 (41%), Gaps = 106/405 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L I LWS+ L A++ H + KAGAD+ +TNSYQA++
Sbjct: 16 VLDGAMATELEKR--GIATNTTLWSATALRDNPQAIIDVHTSYFKAGADVAITNSYQANV 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E D + ++I +S +A++A A Y L
Sbjct: 74 PAF-EAAGYTTDEAEEMITASA-----TLAIKARQA-------------------YYDGL 108
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ R A L+ GS+GPYGA L DGSEY G Y
Sbjct: 109 SNNDRLR----------------------RAAHPLVIGSIGPYGAYLADGSEYTGKY--D 144
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+S+ ++HR R+Q L AG D A ET P E Q L LL+ E+P Q AW+SFS D
Sbjct: 145 LSQTAFKDFHRRRMQLLDAAGVDGFAFETQPKFAEVQALVDLLQTEFPTQHAWISFSIND 204
Query: 245 D-KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
+ + + +G ++ + ++ DQ+ A+G+NC ++ + +K + P+++YPN+
Sbjct: 205 NGRELWDGTPLSEAVQAFNDV--DQISAIGINCTAMENIADAVALIKEYTDKPIIIYPNN 262
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G+ PA+K W + SF T +PL
Sbjct: 263 GDIY-----DPATK----------TWQENEHAASF---TNLVPL---------------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W G A++GGCCRT D + L D
Sbjct: 289 ----------------WQANGAAIIGGCCRTTPADIAEITSVLTD 317
>gi|349918707|dbj|GAA34816.1| homocysteine S-methyltransferase [Clonorchis sinensis]
Length = 451
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 174/436 (39%), Gaps = 99/436 (22%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S+ IDGH WS L + V + H+ +++AG D++ TN+
Sbjct: 10 MNEIRVLDGGVGSECQKRSHLPIDGHKAWSCRLLKEDPNLVCEVHKSYLRAGCDVLSTNT 69
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQAS + L + + +L++ +V V+ AIA
Sbjct: 70 YQASPLTLAKALKISDSEARELMRHAVRLVRRAIATTN---------------------- 107
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
E+ A+ H+ + +L+AGS+GPYGA L DGSEY G
Sbjct: 108 -------------------EESFAADTHQWKSRK--LPVLVAGSLGPYGACLADGSEYSG 146
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y + ++ + E+H R + LV+AG D LA ETIP E + ++R P AWLS
Sbjct: 147 SYADKMTFDELVEFHYARAKILVDAGVDFLAWETIPILMEVVAIAEVMRRLPQALAWLSV 206
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQLKTENIPLVVY 299
+ + + G+ QVA DQ+ +GVNC + + + L
Sbjct: 207 ASSNGQTTVGGDPLHQVAFEIQKC--DQIFGIGVNCCIEHDKIGLALSNLNIGQDGCGPG 264
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
+ G H P SK + L +L S K + LV+Y NSGE +
Sbjct: 265 TDDGYH-----PPPCSKRPEHLDKL-------------STKPRKL-LVLYANSGEMWSPP 305
Query: 360 -------NARWI----------DRDLCEPVDKYVTDWLDE---GVAL------------- 386
W+ R + + + DW E GVA+
Sbjct: 306 PKGLSRRRGHWVWPPNKGPSVWARTIAQFSMRRCADWEKELFNGVAVRRSDPEAVYPKAQ 365
Query: 387 -VGGCCRTYAEDTLHM 401
VGGCCR + H+
Sbjct: 366 WVGGCCRVGPMEIRHL 381
>gi|450005787|ref|ZP_21826858.1| homocysteine methyltransferase [Streptococcus mutans NMT4863]
gi|449188243|gb|EMB89966.1| homocysteine methyltransferase [Streptococcus mutans NMT4863]
Length = 316
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 172/395 (43%), Gaps = 106/395 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L D++ LWS+ +L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELEFLGYDVLG--KLWSAKYLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K +AR
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAK--------NAR----------------------- 100
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V + ++E + + P LI+G VGPY A L DGSEY G+Y +
Sbjct: 101 -----------EKVWQE-LSEKEKQVRPYP----LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP E Q L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLETQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD + W
Sbjct: 262 E--------------------------------------------------VYDGQHQMW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DL + + W G +VGGCCRT D
Sbjct: 272 TQSADLSHTLLENTKIWHTFGAKVVGGCCRTRPND 306
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELI--DKSSQILALGINCSSPSVYSSLLKKIADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|90962661|ref|YP_536577.1| homocysteine methyltransferase [Lactobacillus salivarius UCC118]
gi|90821855|gb|ABE00494.1| Homocysteine S-methyltransferase [Lactobacillus salivarius UCC118]
Length = 307
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 65/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D + LW++ L ++ V + H+ + +AGAD+++T++YQA++
Sbjct: 13 VLDGAMSTPLERLGADT--NNDLWTAKALIDNEELVYEIHKMYFEAGADLIITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + + LIK +V ++A
Sbjct: 71 QAF-EKVGYSEKEARNLIKKAVKIAQKA-------------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E R + IAG++GPYGA L +GSEYRGDY
Sbjct: 98 RDDYENR----------------------TGKHNYIAGTIGPYGAYLANGSEYRGDYELS 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFSCKD 244
V E ++H PRI+ LV A DILAIET P E + LL +++P QK ++S++ D
Sbjct: 136 VEE--YQQFHLPRIEELVNAEVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYTLSD 193
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D IS+G T + R + + Q+IAVG+NCV+ +V ++ +K + L+VYPNS
Sbjct: 194 DDTISDG---TPLPRAIHALEDYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNS 250
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ + Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 166 LDEVLAILELLKKKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 220
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 221 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 255
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+ ILAIET P E + LL++ +P QK ++S++ ++ +P
Sbjct: 152 NAEVDILAIETQPKLDEVLAILELLKKKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 211
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 212 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 271
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + G ++GGCC T
Sbjct: 272 ELIPNWYEAGARIIGGCCTT 291
>gi|348680513|gb|EGZ20329.1| hypothetical protein PHYSODRAFT_488060 [Phytophthora sojae]
Length = 333
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 145/376 (38%), Gaps = 111/376 (29%)
Query: 38 KDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALE 97
+ VV H+ + AGAD+ T SYQAS+ GF + +L S+D
Sbjct: 59 QSVVVDAHKTYFLAGADVATTASYQASVDGFKREGVTAIEDVEKLFAKSIDL-------- 110
Query: 98 ATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR 157
G RD A W L D +
Sbjct: 111 ------------------------GVQARD-----------------AAWSEL---DQTK 126
Query: 158 DI--LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIET 214
I L+ S+G YGA+L DGSEYRGDY +++ + WH+ R A AD L ET
Sbjct: 127 RIKPLVGASIGCYGAALADGSEYRGDY--GMTKEELVAWHKHRFAYFTNYAPADFLICET 184
Query: 215 IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM-NPDQLIAVG 273
IP E + LL E+P A ++ +C++ +++GE ++ + NP QL+A+G
Sbjct: 185 IPCLVEVEAFVDLLNEFPTAHAIVAVACRNGTELNSGEPIARMTEVLSKLKNPSQLLAIG 244
Query: 274 VNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333
+NC P V SL+ +L P VYPNSGE
Sbjct: 245 INCTPPQHVESLLRKLDAAAWPKAVYPNSGEG---------------------------- 276
Query: 334 WLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLC---EPVDKYVTDWLDEGVALVGGC 390
+D VN +W+ D ++++ W D G + GGC
Sbjct: 277 ----------------------WDGVNKKWLPADSTGGPSSWEEFLPKWYDAGARIFGGC 314
Query: 391 CRTYAEDTLHMKHRLD 406
CRT +D ++ +
Sbjct: 315 CRTSPDDIRAIREFFE 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 513 HISNGESFTQVARTCYNM-NPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGER 571
+++GE ++ + NP QL+A+G+NC P V L+ +L P VYPNSGE
Sbjct: 217 ELNSGEPIARMTEVLSKLKNPSQLLAIGINCTPPQHVESLLRKLDAAAWPKAVYPNSGEG 276
Query: 572 YD 573
+D
Sbjct: 277 WD 278
>gi|167860603|gb|ACA05081.1| homocysteine methyltransferase [Flammeovirga yaeyamensis]
Length = 242
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 61/268 (22%)
Query: 38 KDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALE 97
++ + H +++K+GA+I++++SYQASI GFME ++ + L+K + + + A
Sbjct: 3 EEVIKNAHLNYLKSGAEIIISSSYQASIKGFME-KGFSHEVAIDLLKKTTEIAQSA---- 57
Query: 98 ATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR 157
EYR + R
Sbjct: 58 ------------------------------KEEYR--------------------EISKR 67
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPA 217
++ IAGS+GPY A L DGSEY+G Y E V E T+ +H R++ + D+LA+ETIP+
Sbjct: 68 EVFIAGSIGPYAAYLADGSEYKG-YDEAVDENTLRSFHNERLRIIDATDIDVLAVETIPS 126
Query: 218 SKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277
+EA++L L+ + H KAW SFSCK++K +++G + + N ++A+G+NC
Sbjct: 127 LEEAKVLNDLIEKCGH-KAWFSFSCKNEKQLNDGTDIIDIVSLLKHNN--NVMALGINCT 183
Query: 278 RPLMVSSLIEQLKTE--NIPLVVYPNSG 303
P + LI ++ +V+YPN+G
Sbjct: 184 HPKYILGLISEILNAGWKKKIVIYPNAG 211
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
+LA+ETIP+ +EA++L L+ E KAW SFSCK E
Sbjct: 118 VLAVETIPSLEEAKVLNDLI-EKCGHKAWFSFSCKNE 153
>gi|449999645|ref|ZP_21824614.1| homocysteine methyltransferase [Streptococcus mutans N29]
gi|449186776|gb|EMB88592.1| homocysteine methyltransferase [Streptococcus mutans N29]
Length = 316
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 55/301 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L ++G + G LWS+ L + H ++++G+DIV T+SYQAS
Sbjct: 15 ILHGALGTELE-FLGYDVSGK-LWSAKHLLENPSIIQTIHETYLRSGSDIVTTSSYQASY 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ L + + ++I +V K A E + + V PY
Sbjct: 73 QGLCDY-GLSQEEAEKMIALTVSLAKN--AREKVWQELSEKEK--------QVRPYP--- 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
LI+G VGPY A L DGSEY G+Y +
Sbjct: 119 ----------------------------------LISGDVGPYAAYLADGSEYTGNYGQ- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+ + + ++HR RI+ LV+ +D+LA+ETIP EAQ L LL+ E+P +A++SF+ ++
Sbjct: 144 LDKEVLKDFHRSRIKILVDEDSDLLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQN 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
IS+G + +VA + Q++A+G+NC P + SSL++++ + PLV YPNSG
Sbjct: 204 GTTISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSG 261
Query: 304 E 304
E
Sbjct: 262 E 262
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 48/140 (34%)
Query: 306 ILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFS-------------------------- 338
+LA+ETIP EAQ L LL+E +P+ +A++SF+
Sbjct: 167 LLALETIPNFLEAQALVELLQEEFPSVEAYMSFTAQNGTTISDGTAIEEVAELIDKASQI 226
Query: 339 ------CKTENI--------------PLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVT 377
C + ++ PLV YPNSGE YD + W D+ + +
Sbjct: 227 LALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVYDGQHQMWTQSADISHTLLENTK 286
Query: 378 DWLDEGVALVGGCCRTYAED 397
W G +VGGCCRT D
Sbjct: 287 IWHTFGAKVVGGCCRTRPND 306
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERY 572
IS+G + +VA + Q++A+G+NC P + S L++++ + PLV YPNSGE Y
Sbjct: 207 ISDGTAIEEVAELIDKAS--QILALGINCSSPSVYSSLLKKVADITDKPLVTYPNSGEVY 264
Query: 573 D 573
D
Sbjct: 265 D 265
>gi|227545232|ref|ZP_03975281.1| Homocysteine S-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|338202429|ref|YP_004648574.1| homocysteine S-methyltransferase [Lactobacillus reuteri SD2112]
gi|227184797|gb|EEI64868.1| Homocysteine S-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|336447669|gb|AEI56284.1| homocysteine S-methyltransferase [Lactobacillus reuteri SD2112]
Length = 310
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 168/403 (41%), Gaps = 113/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
LIDG S+ L D + LW++ LA V + H+++ KAGA + +T++YQA++
Sbjct: 13 LIDGAMSTALEQLGADT--NNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ ++ LI+ +V KE ARD
Sbjct: 71 PAFIKN-GYSKQEAHSLIQRAVALAKE----------------ARD-------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ E + + +AG++GPYGA L +GSEY GDY H
Sbjct: 100 -----------EYQQETGIYNY-------------VAGALGPYGAYLANGSEYSGDY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD 244
+S ++HRPR+ ++ G D++AIET P E L++E P ++SFS KD
Sbjct: 134 LSTTEYQQFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLVKELAPETLCYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
H+ +G ART + AVGVNC+ V++ IE + + + P++ YPNS
Sbjct: 194 STHLPDGTPLAVAARTVAKY--PNVFAVGVNCIPLEEVTAAIETIHQATDKPVIAYPNSS 251
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
A+ + P K W YP+
Sbjct: 252 ----------ATYD-----------PTTKTW-------------SYPHG----------- 266
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
R L + Y+ WL G+ ++GGCC T +D + L+
Sbjct: 267 -RRGLVD----YLPQWLAAGLTIIGGCCTTTPQDIAALHEYLE 304
>gi|301097559|ref|XP_002897874.1| homocysteine S-methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262106622|gb|EEY64674.1| homocysteine S-methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 332
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 144/371 (38%), Gaps = 108/371 (29%)
Query: 38 KDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALE 97
+D VV H ++ AGAD+ T SYQAS+ GF + +L S+D
Sbjct: 57 QDVVVNAHTNYFLAGADVATTVSYQASVDGFKREGVTALEDVEKLFAKSIDL-------- 108
Query: 98 ATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR 157
GA RD A W+ L +
Sbjct: 109 ------------------------GAQARD-----------------AAWNELQQSKRIK 127
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIP 216
L+ S+G YGA+L DGSEYRGDY + +E + WH+ R A A+ L ETIP
Sbjct: 128 P-LVGASIGCYGAALADGSEYRGDYGKTKNE--LVAWHKHRFAFFTSYAPANFLICETIP 184
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM-NPDQLIAVGVN 275
E + LL E+P A ++ +C + K +++GE ++ + NP QL+A+G+N
Sbjct: 185 CLVEVEAFVDLLNEFPTAHAIVAVACHNGKELNSGEPIARIPEILAKLNNPSQLLAIGIN 244
Query: 276 CVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
C P V SL+ +L P VYPNSGE
Sbjct: 245 CTPPQYVESLLLELDCP-WPKAVYPNSGEG------------------------------ 273
Query: 336 SFSCKTENIPLVVYPNSGERYDAVNARWIDRDLC---EPVDKYVTDWLDEGVALVGGCCR 392
+D VN +W+ D ++Y+ W D G GGCCR
Sbjct: 274 --------------------WDGVNKKWLPADNTGGPSSWEEYLPKWYDAGARFFGGCCR 313
Query: 393 TYAEDTLHMKH 403
T +D ++
Sbjct: 314 TSPDDIRAIRE 324
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMN-PDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS 568
+ K +++GE ++ +N P QL+A+G+NC P V L+ +L P VYPNS
Sbjct: 212 NGKELNSGEPIARIPEILAKLNNPSQLLAIGINCTPPQYVESLLLELDCP-WPKAVYPNS 270
Query: 569 GERYD 573
GE +D
Sbjct: 271 GEGWD 275
>gi|413956526|gb|AFW89175.1| hypothetical protein ZEAMMB73_991702 [Zea mays]
Length = 281
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 151/356 (42%), Gaps = 104/356 (29%)
Query: 42 VQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHA 101
V H +++AGAD+++++SYQA+I GF+ A
Sbjct: 8 VPVHMQYLEAGADVIISSSYQATIPGFI-------------------------------A 36
Query: 102 RIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILI 161
R S A D+L S++ +E R ++ + + ++R L+
Sbjct: 37 RGMSVAEAEDLL--------RTSVKLANEARDEFWKSTLRKSKPIYNR---------ALV 79
Query: 162 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEA 221
A S+G YGA L DGSEY G Y ++ + ++HR R+Q L AG D++A E IP EA
Sbjct: 80 AASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEA 139
Query: 222 QMLCRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRP 279
Q L LL E Q +W+ FS D K++ +GESF + +N + +A VGVNC P
Sbjct: 140 QALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKI---LNASEKVAVVGVNCTPP 196
Query: 280 LMVSSLI-EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSF 337
+ +I E K + VYPNSGE W + K WL
Sbjct: 197 QFIEGIICEFRKQTKKAIAVYPNSGEV----------------------WDGRAKRWLPV 234
Query: 338 SCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
C + +DA+ R W + G +L+GGCCRT
Sbjct: 235 ECLGH-----------KSFDALAKR----------------WQEAGASLIGGCCRT 263
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAV-GVNCVRPLMVSPLI-EQLKTENIPLVVYPN 567
D K++ +GESF + +N + +AV GVNC P + +I E K + VYPN
Sbjct: 163 DGKNLCSGESFADCLKI---LNASEKVAVVGVNCTPPQFIEGIICEFRKQTKKAIAVYPN 219
Query: 568 SGERYD 573
SGE +D
Sbjct: 220 SGEVWD 225
>gi|227893550|ref|ZP_04011355.1| Homocysteine S-methyltransferase [Lactobacillus ultunensis DSM
16047]
gi|227864648|gb|EEJ72069.1| Homocysteine S-methyltransferase [Lactobacillus ultunensis DSM
16047]
Length = 322
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 169/403 (41%), Gaps = 113/403 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S +L + + LW++ L + V H+D+ +AGA++V+T++YQA++
Sbjct: 28 VLDGAMSDELEK--QGVETDNKLWTATALVDQLNKVYNAHQDYFRAGAELVITDTYQANV 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E + + IK++V K+A
Sbjct: 86 QAFEE-AGYSEKEAEKFIKNAVKIAKKA-------------------------------- 112
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY + + +AG++G YGA L DG+EYRG+Y +
Sbjct: 113 ------RDDY----------------QKETGKHNYVAGTIGSYGAFLADGNEYRGEY--N 148
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKE-AQMLCRLLREWPHQKAWLSFSCKD 244
+SE ++H PR++ ++E D++A+ET P E +L L + + ++SF+ KD
Sbjct: 149 LSEKEYLDFHLPRLKLVLEEKPDLIALETQPKITEPVAVLNWLQKNHSNIPVYVSFTLKD 208
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMV-SSLIEQLKTENIPLVVYPNSG 303
KHIS+G S Q + Q+ A+G+NCV P +V +L E K PLVVYPN G
Sbjct: 209 TKHISDGTSIEQATQEVSKYK--QVFAIGINCVSPKLVDQALKEFAKYTAKPLVVYPNLG 266
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
A+ + P K W SF K
Sbjct: 267 ----------ATYD-----------PKIKKWRSFKEKF---------------------- 283
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
D E K W ++G L+GGCC T ++ ++ +D
Sbjct: 284 ---DFAELTQK----WYEDGARLIGGCCTTGPKEIKEIRQSID 319
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D KHIS+G S Q + Q+ A+G+NCV P +V +++ K PLVVYPN
Sbjct: 208 DTKHISDGTSIEQATQEVSKYK--QVFAIGINCVSPKLVDQALKEFAKYTAKPLVVYPNL 265
Query: 569 GERYD 573
G YD
Sbjct: 266 GATYD 270
>gi|340360415|ref|ZP_08682885.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
gi|339883616|gb|EGQ73459.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
Length = 325
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 156/404 (38%), Gaps = 113/404 (27%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DG ++L D G LWS+ L A +A+ H D++ AGA ++ TNSY
Sbjct: 22 AGPVVLDGAMGTELGARGVDTTSG--LWSALALTEAPEAIAAVHADYLTAGARVICTNSY 79
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA + + R++D AR ++ A +
Sbjct: 80 QAVVPALLRA-------------------------------GRTEDEARAVIAASARLAL 108
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA RD R P +L+AGS+GPYGA L DGSEY G
Sbjct: 109 GA--RD---------------------RYTAVQPREAVLVAGSIGPYGAWLADGSEYTGA 145
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLC-RLLREWPHQKAWLSF 240
Y + A H PR++ L G + AIET P EA+ L R+ P + W+SF
Sbjct: 146 YGMRAPD--FARVHLPRLEVLAAEGLRLFAIETQPRLDEARWLTERIGERLPDAECWVSF 203
Query: 241 SCK-DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVV 298
+ D H+++G + A ++AVG+NCV P +V + L+ + PLV
Sbjct: 204 QVRPDGAHLADGTPLARAAAWAQRAR--NVVAVGLNCVAPPVVDRALPVLRAAADKPLVA 261
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
YPNSG+ YD
Sbjct: 262 YPNSGDV--------------------------------------------------YDP 271
Query: 359 VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
V W + + WLD GV L+GGCCRT DT ++
Sbjct: 272 VTRTWRATVGRGRLTASTSAWLDAGVRLIGGCCRTTPADTAELR 315
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D H+++G + A ++AVG+NCV P +V + L+ + PLV YPNS
Sbjct: 208 DGAHLADGTPLARAAAWAQRAR--NVVAVGLNCVAPPVVDRALPVLRAAADKPLVAYPNS 265
Query: 569 GERYD 573
G+ YD
Sbjct: 266 GDVYD 270
>gi|440776437|ref|ZP_20955283.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436723604|gb|ELP47412.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 335
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 143/321 (44%), Gaps = 70/321 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A +V H + +AGA I T S
Sbjct: 44 LLDGGLATELEARGHDLSD--PLWSARLLADAPQEIVAVHAAYFRAGAMIATTAS----- 96
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +S++ + I+ T +R R + +A +
Sbjct: 97 ----------YQASFE------GFAARGISRSDTAGLLR-----RSVELAKAA------- 128
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD + G +A SVGPYGA+L DGSEYRG Y
Sbjct: 129 RDEAGVAGH--------------------------VAASVGPYGAALADGSEYRGRY--G 160
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + +WHRPR++ L A AD+LA+ETIP EA+ L L+R AWLS++ D
Sbjct: 161 ISVRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTI-DG 218
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H G+ + +++AVGVNC P V IE P++VYPNSGEH
Sbjct: 219 AHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEH 276
Query: 306 ILAIE---TIPASKEAQMLCR 323
A+ T P+ A + R
Sbjct: 277 WNALRHNWTGPSRFSAPLAAR 297
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 50/168 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+ QL+ + P L V + +LA+ETIP EA+ L L+R AWLS++
Sbjct: 163 VRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTIDGAHT 221
Query: 339 --------------------------CKTENI------------PLVVYPNSGERYDAVN 360
C +++ P++VYPNSGE ++A+
Sbjct: 222 RAGQPLADAFAVAAGVPEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEHWNALR 281
Query: 361 ARWIDRD-LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W P+ W+ G +VGGCC+ D ++ D
Sbjct: 282 HNWTGPSRFSAPL---AARWISAGARIVGGCCQVRPTDIAAVRRACSD 326
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D H G+ + +++AVGVNC P V P IE P++VYPNSG
Sbjct: 217 DGAHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSG 274
Query: 570 ERYD 573
E ++
Sbjct: 275 EHWN 278
>gi|385841129|ref|YP_005864453.1| Homocysteine S-methyltransferase [Lactobacillus salivarius CECT
5713]
gi|300215250|gb|ADJ79666.1| Homocysteine S-methyltransferase [Lactobacillus salivarius CECT
5713]
Length = 290
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 63/279 (22%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LW++ L ++ V + H+ + +AGAD+++T++YQA++ F E + + LIK +V
Sbjct: 16 LWTAKALIDNEELVYEVHKMYFEAGADLIITDTYQANVQAF-EKVGYSEKEARNLIKKAV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
++A RD E R
Sbjct: 75 KIAQKA--------------------------------RDDYENRT-------------- 88
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+ IAG++GPYGA L +GSEYRGDY V E ++H PRI+ LV A
Sbjct: 89 --------GKHNYIAGTIGPYGAYLANGSEYRGDYELSVEE--YQQFHLPRIEELVNAEV 138
Query: 208 DILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP 266
DILAIET P E + LL+E +P QK ++S++ DD IS+G T + R + +
Sbjct: 139 DILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTISDG---TPLPRAIHALED 195
Query: 267 -DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
Q+IAVG+NCV+ +V ++ +K + L+VYPNS
Sbjct: 196 YSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSS 234
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQLIAVG 539
LDE +A++ Y + +++ + L D D IS+G T + R + + Q+IAVG
Sbjct: 149 LDEVLAILELLKEKYPQQKVYVSYTLSD--DDTISDG---TPLPRAIHALEDYSQVIAVG 203
Query: 540 VNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+NCV+ +V P ++ +K + L+VYPNS YD
Sbjct: 204 INCVKLELVEPALKNMKEITDKHLIVYPNSSAVYD 238
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 47/140 (33%)
Query: 301 NSGEHILAIETIPASKEAQMLCRLLRE-WPNQKAWLSFSCKTEN-------IP------- 345
N+ ILAIET P E + LL+E +P QK ++S++ ++ +P
Sbjct: 135 NAEVDILAIETQPKLDEVLAILELLKEKYPQQKVYVSYTLSDDDTISDGTPLPRAIHALE 194
Query: 346 --------------------------------LVVYPNSGERYDAVNARWIDRDLCEPVD 373
L+VYPNS YD + W +
Sbjct: 195 DYSQVIAVGINCVKLELVEPALKNMKEITDKHLIVYPNSSAVYDPKSKTWSQPKTSATFE 254
Query: 374 KYVTDWLDEGVALVGGCCRT 393
+ + +W + ++GGCC T
Sbjct: 255 ELIPNWYEARARIIGGCCTT 274
>gi|356504951|ref|XP_003521256.1| PREDICTED: LOW QUALITY PROTEIN: selenocysteine
methyltransferase-like [Glycine max]
Length = 327
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 171/401 (42%), Gaps = 100/401 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L ++ + Q H D+++ GADI++T SYQA+I
Sbjct: 17 VIDGGLATELERHGDDLND--PLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATI 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF D +S L +S+ IA EA R++ G
Sbjct: 75 QGFKAKGYSDEESEALLKRSA------EIAFEA-----------REVYDKNCAGCCSGDG 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D R++ P IL+A VG YGA L DGS Y GDY
Sbjct: 118 EDDG-------------------RILKQRP---ILVAALVGSYGAYLADGSGYSGDY--- 152
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
+A E R R+Q L ++ AD+LA ET+ EA+ +LL E + AW SF+
Sbjct: 153 -GDAITVEIRR-RVQILADSSADLLAFETVSNKLEAEAFAQLLEEEDIKIPAWFSFN-SX 209
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNSG 303
++ +G+S + + N +++AVG+ C P + LI LK P+V+YPNSG
Sbjct: 210 GVNVVSGDSLMECGSIAESGN--KVVAVGIYCTPPRFIHGLIVLLKRVTTKPIVIYPNSG 267
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
ET A L+EW N
Sbjct: 268 ------ETYDAD---------LKEWVQ-----------------------------NTGV 283
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
D D YV W + G + VGGCCRT DT+ +R
Sbjct: 284 TDEDFI----SYVNKWXELGASCVGGCCRT-TPDTIRKIYR 319
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 513 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGER 571
++ +G+S + + N +++AVG+ C P + LI LK P+V+YPNSGE
Sbjct: 212 NVVSGDSLMECGSIAESGN--KVVAVGIYCTPPRFIHGLIVLLKRVTTKPIVIYPNSGET 269
Query: 572 YDFHLADEKNNCVKSD 587
YD L + N +D
Sbjct: 270 YDADLKEWVQNTGVTD 285
>gi|385817595|ref|YP_005853985.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
gi|327183533|gb|AEA31980.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
Length = 306
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 160/339 (47%), Gaps = 64/339 (18%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S +L + + LW++ L + V H+D+ +AGA++V+T++YQA++
Sbjct: 12 VLDGAMSDELEK--QGVETDNKLWTATALVDQLNKVYNAHQDYFRAGAELVITDTYQANV 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E S Y K + ++++A+ + A AR DD ++ G Y
Sbjct: 70 QAFEE-------SGYSK-KEAEKFIRDAVKV-AKKAR---DDYQKE------TGKYN--- 108
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+AG++G YGA L DG+EYRGDY +
Sbjct: 109 ----------------------------------YVAGTIGSYGAYLADGNEYRGDY--N 132
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKE-AQMLCRLLREWPHQKAWLSFSCKD 244
+SE ++H PR++ +++ D++A+ET P E +L L +P ++SF+ KD
Sbjct: 133 LSEKEYLDFHLPRLKLVLKERPDLIALETQPKITEPVAVLNWLETNYPDMPIYVSFTLKD 192
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMV-SSLIEQLKTENIPLVVYPNSG 303
KH+S+G S + Q+ A+G+NCV P +V +L E K + PLVVYPN G
Sbjct: 193 SKHVSDGTSIEHATQEISKYK--QVFAIGINCVSPKLVDQALKEFAKYTSKPLVVYPNLG 250
Query: 304 -EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
+ I+ + KE L ++W A L C+T
Sbjct: 251 ATYDPKIKKWRSFKEKFDFAELTQKWYEDGAHLIGGCRT 289
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
+ E VA++ Y + +++ L D KH+S+G S + Q+ A+G+
Sbjct: 165 ITEPVAVLNWLETNYPDMPIYVSFTLKD--SKHVSDGTSIEHATQEISKYK--QVFAIGI 220
Query: 541 NCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYDFHLADEKNNCVKSDVTHL 591
NCV P +V +++ K + PLVVYPN G YD + ++ K D L
Sbjct: 221 NCVSPKLVDQALKEFAKYTSKPLVVYPNLGATYDPKIKKWRSFKEKFDFAEL 272
>gi|253756432|ref|YP_003029572.1| homocysteine methyltransferase [Streptococcus suis BM407]
gi|251818896|emb|CAZ56739.1| homocysteine S-methyltransferase [Streptococcus suis BM407]
Length = 315
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 184/410 (44%), Gaps = 113/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++ G ++L + G + G LWS+ +L + H+D+I+AGAD+V T++YQA+
Sbjct: 15 ILHGALGTELE-FRGHDVSGK-LWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G E + L + +LI+ +VD KEA RD + A
Sbjct: 73 EGLAE-VGLSQAEAEELIRLTVDLAKEA----------------RDEVWA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
++E ++ P LI+G VGPY A L +G+EY GDY +
Sbjct: 106 -----------------ELSEAEKVQRTYP----LISGDVGPYAAYLANGAEYTGDY-GN 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+S + + ++H RI+ L+E A++LA+ETIP EAQ L LL E +P +A++SF+ +D
Sbjct: 144 ISLSELKDFHCRRIELLLEQEAELLALETIPNVLEAQALVELLAEDFPEAEAYISFTSQD 203
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+ IS+G S ++A + +Q++AVG+NC P + + + QL+ + + P V YPNSG
Sbjct: 204 GQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSG 261
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
E YD W
Sbjct: 262 E--------------------------------------------------VYDGATQTW 271
Query: 364 IDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGL 412
++ D + +W + G +VGGCCRT D + D V+GL
Sbjct: 272 KEKADDSHSLLDNTLEWHELGAKVVGGCCRTRPAD-------IADLVAGL 314
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D + IS+G S ++A + +Q++AVG+NC P + + QL+ + + P V YPNS
Sbjct: 203 DGQSISDGTSIEKIAELV--NSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNS 260
Query: 569 GERYD 573
GE YD
Sbjct: 261 GEVYD 265
>gi|423336298|ref|ZP_17314046.1| homocysteine S-methyltransferase [Lactobacillus reuteri ATCC 53608]
gi|337729498|emb|CCC04628.1| homocysteine S-methyltransferase [Lactobacillus reuteri ATCC 53608]
Length = 310
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 166/402 (41%), Gaps = 113/402 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
LIDG S+ L D + LW++ LA V + H+++ KAGA + +T++YQA++
Sbjct: 13 LIDGAMSTALEQLGADT--NNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ ++ LI+ +V KE ARD
Sbjct: 71 PAFIKN-GYSKQEAHSLIQRAVALAKE----------------ARD-------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ E + + +AG++GPYGA L +GSEY GDY H
Sbjct: 100 -----------EYQQETGIYNY-------------VAGALGPYGAYLANGSEYTGDY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD 244
+S ++HRPR+ ++ G D++AIET P E L++E P ++SFS KD
Sbjct: 134 LSTVEYQQFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLVKELAPDTLCYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ +G ART + AVGVNC+ V++ IE + + + P++ YPNS
Sbjct: 194 STRLPDGTPLAVAARTVAKY--PNVFAVGVNCIPLEEVTAAIETVHQATDKPVIAYPNSS 251
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
AI P K W YP+ G
Sbjct: 252 ----AIYD-----------------PTTKTW-------------SYPHGG---------- 267
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
R L + Y+ WL G+ +VGGCC T +D + L
Sbjct: 268 --RGLVD----YLPQWLAAGLTIVGGCCTTTPQDIAALHEYL 303
>gi|336120795|ref|YP_004575581.1| homocysteine S-methyltransferase [Microlunatus phosphovorus NM-1]
gi|334688593|dbj|BAK38178.1| homocysteine S-methyltransferase [Microlunatus phosphovorus NM-1]
Length = 310
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 163/410 (39%), Gaps = 123/410 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG ++L + D+ LWS L A + V HR F AGA + ++ SYQ S
Sbjct: 18 LMDGGLGTELESSGCDVTG--ILWSGQLLLDAPEVVEAAHRRFFAAGAQVAISGSYQLSF 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + +D ++ +++ SV AR + DP +A SVGPYGA+L
Sbjct: 76 EG-LAAVGVDRAAAETMLRRSVAVAS--------AAREAAVDP-DQTWVAASVGPYGATL 125
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSE+RG Y + V+E + +WH
Sbjct: 126 ADGSEFRGTYGKTVTE--LQQWH------------------------------------- 146
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR+ L EAGAD+LAIETIP E + L R + + +WLS +C
Sbjct: 147 ----------RPRLTVLAEAGADVLAIETIPCLAEVEALLRDI-DGSGVPSWLSLTCASA 195
Query: 246 KHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNS 302
GE + + M D ++IAVGVNC+ P L+ ++ P+VVYPNS
Sbjct: 196 TTTRAGEPVAEA----FAMAADVAEVIAVGVNCLPPGDARDLVATAARSSGKPVVVYPNS 251
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE EW DAV+
Sbjct: 252 GE----------------------EW----------------------------DAVHKS 261
Query: 363 WI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG 411
W D L + + WL +G LVGGCCR + + L SG
Sbjct: 262 WYGDGSL---LAGEIAGWLADGARLVGGCCRVRPAEIEKLAAELSAAESG 308
>gi|403251605|ref|ZP_10917937.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [actinobacterium SCGC
AAA027-L06]
gi|402915056|gb|EJX36047.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [actinobacterium SCGC
AAA027-L06]
Length = 282
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 70/297 (23%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DGG S+ L ++ LW+ L + + + H DFI AGA I++T++YQ S
Sbjct: 5 LDGGLSTALENNGNNL--NTSLWTGELLLSNPGEITKAHLDFIVAGAQIIITSAYQLSFA 62
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
G R SDD + LIA +
Sbjct: 63 G-------------------------------CQKRGWSDDQTQRALIAST--------- 82
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
+++ +A +++ +A SVGPYGA L DGSEY+G+Y V
Sbjct: 83 -----------QLAKDAVA--------SSGKNVRVAASVGPYGAHLADGSEYKGNY--GV 121
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDK 246
S+ + ++H+ R++ L+ D+LA+ET+P + E ++L LL++ W+++SCK+
Sbjct: 122 SKTVIKDFHQRRLEVLLSTNPDLLALETMPDTFEVEVLLELLKDCT-TPFWVTYSCKEGN 180
Query: 247 HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+ G+SF+ +AVG+NC +P ++ L+ K++ P VVYPNSG
Sbjct: 181 QTNAGQSFSDAVSLA-----QPALAVGINCTKPELIEGLLNSAKSDK-PFVVYPNSG 231
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 42/147 (28%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN------------ 343
L V ++ +LA+ET+P + E ++L LL++ W+++SCK N
Sbjct: 134 LEVLLSTNPDLLALETMPDTFEVEVLLELLKDCTT-PFWVTYSCKEGNQTNAGQSFSDAV 192
Query: 344 -----------------------------IPLVVYPNSGERYDAVNARWIDRDLCEPVDK 374
P VVYPNSG +DA +W
Sbjct: 193 SLAQPALAVGINCTKPELIEGLLNSAKSDKPFVVYPNSGRIWDAEKKQWFGSASTGFDQA 252
Query: 375 YVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ W G +GGCC A++ +
Sbjct: 253 LIKRWQSSGAEYIGGCCGIGAKEIAEL 279
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 536 IAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
+AVG+NC +P ++ L+ K++ P VVYPNSG +D
Sbjct: 199 LAVGINCTKPELIEGLLNSAKSDK-PFVVYPNSGRIWD 235
>gi|347534176|ref|YP_004840846.1| Homocysteine S-methyltransferase [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504232|gb|AEN98914.1| Homocysteine S-methyltransferase [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 320
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 164/394 (41%), Gaps = 117/394 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + LWS+ L + ++ Q H D+ KAGADI +T++YQA+I
Sbjct: 32 VLDGAMGTELEKL--GVKTNDLLWSANALINNQKSIYQVHADYFKAGADIAITDTYQANI 89
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + + +++D + LIK V+ K+ ARD P G
Sbjct: 90 AAFAK-VGINHDQALDLIKKGVELAKQ----------------ARD-----DFNPAG--- 124
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
L+AG VGPYGA L +G+EY G Y
Sbjct: 125 ----------------------------------LVAGCVGPYGAYLANGAEYTGTY--D 148
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
+S A ++H+ +I+ L+ AG+D+++++T+P E + + +++ + P++ W+S S KD
Sbjct: 149 LSFAEYQKFHQEKIKTLINAGSDLISVDTMPNFAEIKSVVKIINDLPNKIPYWISLSVKD 208
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ +S+G V + + +GVNC + ++ ++ + ++P+VVYPN G
Sbjct: 209 ENTLSDGTPLRDV--IIWLGKQSGISGIGVNCTKIENITPIVSLMHHLTDLPIVVYPNPG 266
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ YD W
Sbjct: 267 --------------------------------------------------DIYDPQTKTW 276
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ ++ V WL EG ++GGCCRT +D
Sbjct: 277 TSVPHTDTFEQEVPRWLAEGANIIGGCCRTIPQD 310
>gi|313893891|ref|ZP_07827457.1| putative homocysteine S-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313441455|gb|EFR59881.1| putative homocysteine S-methyltransferase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 341
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 167/415 (40%), Gaps = 130/415 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L Y +I H LWS+ L D + + H ++ GADI+ ++ YQA++
Sbjct: 22 VLDGALGTELERYGCNI--QHKLWSAKVLMEQPDVIKKIHITYLAVGADIIQSSGYQATV 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA-----------------IAL-EATHARIR--S 105
GF + L + + +L+K SV +A I L E T ++ S
Sbjct: 80 AGF-KGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALMLRGITLGEETSNGVKYFS 138
Query: 106 DDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSV 165
+ L+A SVGPYGA L DGSEYRG
Sbjct: 139 EGALPKPLVAASVGPYGAFLADGSEYRGY------------------------------- 167
Query: 166 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLC 225
+ + +Y+E +H PR+ E DIL+ ETIP+ E +
Sbjct: 168 ----------PDVQTEYLE--------VFHIPRLALFAEENPDILSFETIPSYDETIAIA 209
Query: 226 RLLREWPHQK---AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMV 282
R + + + AW++F+CKD+ H+++GE+ + A + P + +G+NC +P V
Sbjct: 210 RAMSDPFTSRGIPAWIAFACKDEHHVASGETIIKCAEMIDKVRP--VTGIGINCTKPEYV 267
Query: 283 SSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
SLI+ ++T + P+ VYPN GE
Sbjct: 268 ESLIKDIRTVTDKPIAVYPNLGES------------------------------------ 291
Query: 342 ENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
YD+ W D VD YV W G ++GGCCRT E
Sbjct: 292 --------------YDSKTKTWYG-DPASFVD-YVDVWRKAGAEIIGGCCRTTPE 330
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNS 568
D+ H+++GE+ + A + P + +G+NC +P V LI+ ++T + P+ VYPN
Sbjct: 231 DEHHVASGETIIKCAEMIDKVRP--VTGIGINCTKPEYVESLIKDIRTVTDKPIAVYPNL 288
Query: 569 GERYD 573
GE YD
Sbjct: 289 GESYD 293
>gi|302557562|ref|ZP_07309904.1| homocysteine S-methyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475180|gb|EFL38273.1| homocysteine S-methyltransferase [Streptomyces griseoflavus Tu4000]
Length = 312
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 138/303 (45%), Gaps = 66/303 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG S+QL+ D+ D LWS+ LA +AV H + +AGAD+ +T SYQ
Sbjct: 23 RVLVLDGGMSNQLAAAGHDLSD--ELWSARLLAEDPEAVTAAHLAYFEAGADVAITASYQ 80
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF + + + +L+ A+++E R +R + +A SVGPYG
Sbjct: 81 ATFEGFARR-GIGREEAGRLL---------ALSVECARTAARRARVSRPLWVAASVGPYG 130
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A L DGSEYRG Y +V+E
Sbjct: 131 AMLADGSEYRGRYGLNVAE----------------------------------------- 149
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ +HRPR++ L AG D+LA+ETIP + EA+ L R LR AWLS+S
Sbjct: 150 --------LERFHRPRMEVLAAAGPDVLALETIPDADEAEALLRALRGL-GVPAWLSYSV 200
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
D+ + +A ++IAVGVNC P I + P+VVYPN
Sbjct: 201 SGDRTRAGQPLEEALALAARAD---EVIAVGVNCCTPDDADHAIALAARVTGKPVVVYPN 257
Query: 302 SGE 304
SGE
Sbjct: 258 SGE 260
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 52/140 (37%), Gaps = 48/140 (34%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------------------- 338
V +G +LA+ETIP + EA+ L R LR AWLS+S
Sbjct: 160 VLAAAGPDVLALETIPDADEAEALLRALRGL-GVPAWLSYSVSGDRTRAGQPLEEALALA 218
Query: 339 --------------------------CKTENIPLVVYPNSGERYDAVNARWIDRDLCEPV 372
+ P+VVYPNSGE +DA W R
Sbjct: 219 ARADEVIAVGVNCCTPDDADHAIALAARVTGKPVVVYPNSGETWDAGARAWTGRATFSA- 277
Query: 373 DKYVTDWLDEGVALVGGCCR 392
V W + G L+GGCCR
Sbjct: 278 -GQVKGWRESGARLIGGCCR 296
>gi|377555946|ref|ZP_09785670.1| Homocysteine S-methyltransferase [Lactobacillus gastricus PS3]
gi|376168818|gb|EHS87544.1| Homocysteine S-methyltransferase [Lactobacillus gastricus PS3]
Length = 307
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 164/406 (40%), Gaps = 127/406 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG S+ L + G D LW++ L D V + H+ + +AGA I +T+SYQ ++
Sbjct: 13 VIDGSMSTPLEIW-GAQTDSD-LWTAAALINHPDLVKRVHQAYFEAGARITITDSYQTNV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI----LIAGSVGPY 121
F E ++ +LI+ L A A+ D+ + L+AGS+GPY
Sbjct: 71 AAF-EKHGYGEQAARRLIR-----------LSAQLAQTARDEYEKATGVHNLVAGSIGPY 118
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRGDY E ++A++
Sbjct: 119 GAYLADGSEYRGDY-----ELSLADYQ--------------------------------- 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ---KAWL 238
++H PR++ L+ AG D LAIET P E + L + HQ W+
Sbjct: 141 -----------DFHAPRLEELLAAGVDCLAIETQPKLAEVTAILAWLHD--HQISVPVWV 187
Query: 239 SFSCKDDKHISNGESFTQVARTCY-NMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPL 296
SFS +D + IS G + TQ ++N ++AVGVNC+ M + +E + K ++P+
Sbjct: 188 SFSLQDPQTISEGTALTQAVEAIQDDLN---VLAVGVNCMPVTMATPAVETIAKVASVPI 244
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
+VYPNSG +Y
Sbjct: 245 IVYPNSG--------------------------------------------------AQY 254
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
D + W + DW+ G ++GGCC T +D +K
Sbjct: 255 DPITKTWQTTTGQTSFAQAAVDWVQAGAGIIGGCCTTMPKDIQEIK 300
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYN-MNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPN 567
D + IS G + TQ + +N ++AVGVNC+ M +P +E + K ++P++VYPN
Sbjct: 193 DPQTISEGTALTQAVEAIQDDLN---VLAVGVNCMPVTMATPAVETIAKVASVPIIVYPN 249
Query: 568 SGERYD 573
SG +YD
Sbjct: 250 SGAQYD 255
>gi|241949431|ref|XP_002417438.1| S-methylmethionine:homocysteine methyltransferase, putative;
homocysteine S-methyltransferase, putative [Candida
dubliniensis CD36]
gi|223640776|emb|CAX45091.1| S-methylmethionine:homocysteine methyltransferase, putative
[Candida dubliniensis CD36]
Length = 311
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 70/305 (22%)
Query: 6 LIDGGFSSQL-------STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+IDG ++L STY+ PLWS L + V Q H D+I AGAD+++T
Sbjct: 14 VIDGALGTELERLLPTTSTYLPS---SSPLWSGQVLIKNPELVEQVHLDYINAGADMIIT 70
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
++YQ S +++ D D + L S AL+ + ++ RD
Sbjct: 71 STYQTSYASLHKYIGYDMDQAVTLWNS---------ALDVAKSAVKKS--GRD------- 112
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
D++IAGS+GPY L +GSEY
Sbjct: 113 ---------------------------------------DVIIAGSIGPYATLLANGSEY 133
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
GDY + VS+ + E+H P + + DI+ IETIP+ +E +++ L +++ ++ ++
Sbjct: 134 NGDY-QGVSDQELIEYHTPLFEFYNNSDVDIICIETIPSFQELKVIIGLTKKYTSKEFFI 192
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
S + + +S+G S T+VA+ +N + +AVG+NC V + L N P+ +
Sbjct: 193 SINPQTGSALSDGTSLTEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--NFPIFI 250
Query: 299 YPNSG 303
YPN G
Sbjct: 251 YPNLG 255
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
+S+G S T+VA+ +N + +AVG+NC V + L N P+ +YPN G YD
Sbjct: 202 LSDGTSLTEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--NFPIFIYPNLGFVYD 259
>gi|441149468|ref|ZP_20965231.1| homocysteine methyltransferase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440619490|gb|ELQ82536.1| homocysteine methyltransferase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 307
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 161/404 (39%), Gaps = 121/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ D LWS+ LA A AVV HR + +AGA + +T SYQA+
Sbjct: 19 VLDGGLSNQLESAGHDLSDA--LWSARLLAEAPAAVVAAHRTYYEAGAQVAITASYQATF 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + +L++ SV+ +EA + +A S GPYGA L
Sbjct: 77 EGFAA-RGIGAAEAAELLRRSVELAREAARQATAAGAA------GPLYVAASAGPYGAML 129
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y V+E
Sbjct: 130 ADGSEYRGRYGLSVAE-------------------------------------------- 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +HRPR++ L AG D+LA+ET+P + EA+ L R +R AWLSFS +
Sbjct: 146 -----LERFHRPRLEVLAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSFSAAGE 199
Query: 246 KHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNS 302
H G+ + + D +++AVGVNC P + + P+VVYPNS
Sbjct: 200 -HTRAGQPLEDA----FALASDVPEVVAVGVNCCTPEDADQAVALAARASGKPVVVYPNS 254
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE+ W Q +AW C T S +R
Sbjct: 255 GEN----------------------WDAQARAW----CGTPAF-------SADR------ 275
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
V W G LVGGCCR + + +L
Sbjct: 276 --------------VASWTAAGARLVGGCCRVGPDAVAALARQL 305
>gi|302839978|ref|XP_002951545.1| hypothetical protein VOLCADRAFT_92147 [Volvox carteri f.
nagariensis]
gi|300263154|gb|EFJ47356.1| hypothetical protein VOLCADRAFT_92147 [Volvox carteri f.
nagariensis]
Length = 327
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 143/311 (45%), Gaps = 66/311 (21%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V ++DG ++L G + G LWS+ L D + H D+++AG+D++ T +Y
Sbjct: 10 GGVLILDGAQGTELERR-GVHLGGSKLWSAQLLIDDPDLIRTIHLDYLRAGSDVITTFTY 68
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QASI GF + +D L+ +VD + A R + + P P+
Sbjct: 69 QASIQGFAD-AGMDARMGATLLNRAVDLAESARTAFLDEQRQQHEQPP----------PH 117
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+ + V LIA S G YGA L DGSE+RGD
Sbjct: 118 -------------HQQRVRP------------------LIAFSSGSYGAYLADGSEFRGD 146
Query: 182 YVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREWPHQK-AWLS 239
Y + ++ +A +HR R++ + D+LA ET+P +EA+ + LLR+ + K AW+S
Sbjct: 147 YADSMTLQQLANFHRDRLEPVRHRTEIDLLAFETVPCLREAEAILELLRQERYGKPAWIS 206
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPD------QLIAVGVNCVRPLMVSSLIEQLKTEN 293
FSC+D H S+GE F A C + +++A GVNC P +
Sbjct: 207 FSCRDAVHTSHGERF---AEQCVPLLAAAAAEGLEVVATGVNCTAP------------RH 251
Query: 294 IPLVVYPNSGE 304
+ LV YPNSGE
Sbjct: 252 LLLVCYPNSGE 262
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 45/136 (33%)
Query: 306 ILAIETIPASKEAQMLCRLLR-EWPNQKAWLSFSCK------------------------ 340
+LA ET+P +EA+ + LLR E + AW+SFSC+
Sbjct: 175 LLAFETVPCLREAEAILELLRQERYGKPAWISFSCRDAVHTSHGERFAEQCVPLLAAAAA 234
Query: 341 --------------TENIPLVVYPNSGERYDAVNARW--IDRDLCEP--VDKYVTDWL-- 380
++ LV YPNSGE +D + W + D+ EP + + +
Sbjct: 235 EGLEVVATGVNCTAPRHLLLVCYPNSGEEWDGEHRCWRHLPDDIAEPECFAEAAAECVYG 294
Query: 381 DEGVALVGGCCRTYAE 396
D V+L+GGCCRT E
Sbjct: 295 DPRVSLMGGCCRTGPE 310
>gi|290562601|gb|ADD38696.1| Homocysteine S-methyltransferase 4 [Lepeophtheirus salmonis]
Length = 392
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 143/318 (44%), Gaps = 90/318 (28%)
Query: 6 LIDGGFSSQLSTYV-GDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGA-DIVMTNSYQA 63
++DGGFS+Q ++V + G W+S + +AVV+TH+DF+ G+ D++ TN+YQA
Sbjct: 21 VLDGGFSTQCVSHVSAESFTGRAHWTSELIDENPEAVVETHKDFLSHGSVDLISTNTYQA 80
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
G I+ +V+ +AI THA R I GS+GPY A
Sbjct: 81 HCG---------------TIEKAVELADQAIF--ETHA------IPRKAGIVGSLGPYAA 117
Query: 124 SLRDGSEYRGDYVEH--VSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
L GSEY GD +SE + WH
Sbjct: 118 FLASGSEYNGDKSTSYPLSEEELKTWH--------------------------------- 144
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
+ RI+ ++ G D++A ETIP+ KEA ++ L+ + K W+SF
Sbjct: 145 --------------KERIRHMMIGGVDVIAFETIPSIKEAILILDLIDNTLNAKCWISFQ 190
Query: 242 CKDDKHISNGESFTQVART--CY-NMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN----- 293
CKD K ++ G+S+ + R+ C+ +L+++G+NC P +S L++ + N
Sbjct: 191 CKDSKSLAYGDSYKEAVRSLMCHPAYAKRKLLSIGINCTSPKYISPLLKLAEEVNNKSNF 250
Query: 294 --------IPLVVYPNSG 303
IP VVYPN G
Sbjct: 251 PDMYGYWRIPYVVYPNRG 268
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Query: 510 DDKHISNGESFTQVART--CY-NMNPDQLIAVGVNCVRPLMVSPLIEQLKTEN------- 559
D K ++ G+S+ + R+ C+ +L+++G+NC P +SPL++ + N
Sbjct: 193 DSKSLAYGDSYKEAVRSLMCHPAYAKRKLLSIGINCTSPKYISPLLKLAEEVNNKSNFPD 252
Query: 560 ------IPLVVYPNSG 569
IP VVYPN G
Sbjct: 253 MYGYWRIPYVVYPNRG 268
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK 340
G ++A ETIP+ KEA ++ L+ N K W+SF CK
Sbjct: 155 GVDVIAFETIPSIKEAILILDLIDNTLNAKCWISFQCK 192
>gi|298714389|emb|CBJ27446.1| Homocysteine S-methyltransferase [Ectocarpus siliculosus]
Length = 436
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 178/418 (42%), Gaps = 40/418 (9%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ LWS+ LA + TH + +AGAD+ + SYQAS
Sbjct: 17 VLDGGLATELEAQGADLTGD--LWSAALLADNPSIIRNTHLAYFRAGADVATSASYQASF 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ + + + +L+ SV EA + A + + PA P +L
Sbjct: 75 EGFLR-KGIGPERAEELLLLSVRLAVEA--RDQFWAEYQEERPASR---PAPTKPQ--TL 126
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI----LIAGSVGPYGASLRDGSEYRGD 181
R S+ +E A + +D L+A S+G YGA L DGSEYRGD
Sbjct: 127 RQPSQPTATAIEEEENAKQHQQPVRGSDGRRHRRRLRPLVAASLGCYGAVLADGSEYRGD 186
Query: 182 YVEHVSEATMAEWHRPRIQALVEA-GADILAIETIPASKEAQMLCRLLREW-PHQKAWLS 239
YV+ ++ E+H R++ L A G D++ ET+P E + + LL+++ P A +S
Sbjct: 187 YVD-TPAGSLKEFHARRLEILARADGVDMVVFETVPCLAEVRAILSLLQDFRPRVSAVIS 245
Query: 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
SCKDD+H+ +GE A + +Q A G P +V++ V
Sbjct: 246 VSCKDDQHLRSGERLHDFADLIWRHAEEQDAAEGP----PAVVATTTTTTTRPACVAAVG 301
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
N A T+ A A+ P + + LV YPNSGE +DA
Sbjct: 302 VNCTSPSHAAGTLRALAAARARPDARHGAPRE-------TPPSRVALVAYPNSGEEWDAS 354
Query: 360 NARWID----RDLCEPVDKYVT--------DWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W++ RD +W G +VGGCCRT ++ L
Sbjct: 355 VRDWVEGTGLRDREAGGGGGAEEFGRMARDEWFAAGATVVGGCCRTRPAHVAEIRRAL 412
>gi|325068415|ref|ZP_08127088.1| homocysteine methyltransferase [Actinomyces oris K20]
Length = 308
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 162/392 (41%), Gaps = 112/392 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D + LWS+ L TA D V + H D++ AGA ++ TN+YQA++
Sbjct: 11 VLDGAMGTELDACGVDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNTYQATL 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
L++S D AR ++ AG+ A+
Sbjct: 69 --------------PALVRSGEDAAG-----------------ARRVIAAGARLAKEAAR 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
+ G E+ P +L+AG +GPYGA L DGSEY G Y ++
Sbjct: 98 QFGKEH-----------------------PEEPVLVAGGLGPYGAYLADGSEYTGAYGID 134
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK 243
+ + E H PRI+ LV G D+ A+ET+P EA+ L ++ P + W+SF +
Sbjct: 135 ILEDPGFQEVHLPRIEVLVGEGIDLFALETLPRLDEARALASMVTGLAPQAQCWVSFQVR 194
Query: 244 -DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYPN 301
D +++G + A ++AVGVNCV P +V+ + L+ PLV YPN
Sbjct: 195 PDGATLADGTPLAEAAAWAEQEE--IVVAVGVNCVAPGVVARALPVLRAATRKPLVAYPN 252
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
+G+ P K W S + + IP
Sbjct: 253 AGDLY---------------------DPATKTWQS-TGEGAGIP---------------- 274
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ W+D GV LVGGCCRT
Sbjct: 275 ------------ELAPSWIDAGVRLVGGCCRT 294
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNSGERYD 573
++AVGVNCV P +V+ + L+ PLV YPN+G+ YD
Sbjct: 219 VVAVGVNCVAPGVVARALPVLRAATRKPLVAYPNAGDLYD 258
>gi|333919400|ref|YP_004492981.1| homocysteine methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481621|gb|AEF40181.1| homocysteine methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
Length = 297
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 148/339 (43%), Gaps = 69/339 (20%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+A + DGG ++ L ++ G LWS+ L D + HR F AGADI +T S
Sbjct: 9 LARALVCDGGLATALEARGHNLAGG--LWSARLLLDTPDEIAAVHRAFFAAGADIAITAS 66
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y +S++ + I T +R R + IA
Sbjct: 67 ---------------YQASFR------GFANCGIGRRGTERLLR-----RSVRIA----- 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A +RD E+ R +A S+GPYGA+ DGSEY+G
Sbjct: 96 --ADVRD------------------EFGRG---------FVAASIGPYGAAAADGSEYKG 126
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y V E + WHRPR + L + GAD+LA+ETIP EA+ L L+ E+ AWLS+
Sbjct: 127 RYGLSVRE--LRAWHRPRFEILADTGADVLAVETIPDLDEAEALASLISEF-RVPAWLSY 183
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYP 300
+ + G+ + + D ++AVGVNC P V I+ + P++VYP
Sbjct: 184 TIAGAR-TRAGQPVSDAFEVASEI--DSIVAVGVNCCAPADVIPTIDTAQHSGKPVIVYP 240
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
NSGE A E + +++ +L R+W A + C
Sbjct: 241 NSGEGWDA-EAGRWTGKSEFSVKLARQWAAAGAQIIGGC 278
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 48/165 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+ +L+ + P + ++G +LA+ETIP EA+ L L+ E+ AWLS++
Sbjct: 132 VRELRAWHRPRFEILADTGADVLAVETIPDLDEAEALASLISEF-RVPAWLSYTIAGART 190
Query: 339 --------------------------CKTENI------------PLVVYPNSGERYDAVN 360
C ++ P++VYPNSGE +DA
Sbjct: 191 RAGQPVSDAFEVASEIDSIVAVGVNCCAPADVIPTIDTAQHSGKPVIVYPNSGEGWDAEA 250
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
RW + E K W G ++GGCCR A D + L
Sbjct: 251 GRWTGKS--EFSVKLARQWAAAGAQIIGGCCRVGAGDIAQVASAL 293
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
D ++AVGVNC P V P I+ + P++VYPNSGE +D
Sbjct: 207 DSIVAVGVNCCAPADVIPTIDTAQHSGKPVIVYPNSGEGWD 247
>gi|408528410|emb|CCK26584.1| Homocysteine S-methyltransferase ybgG [Streptomyces davawensis JCM
4913]
Length = 302
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 66/304 (21%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ G LWS+ LA +A+ + H + +AGAD+ +T SY
Sbjct: 13 AGPVVLDGGMSNQLESAGHDL--GDELWSARLLAERPEAITEAHLAYFEAGADVAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + D + +L+ A+++E R R + +A SVGPY
Sbjct: 71 QATFEGFAG-RGIGRDQAAELL---------ALSVELAREAARRAKADRPLWVAASVGPY 120
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E
Sbjct: 121 GAMLADGSEYRGRYGLGVDE---------------------------------------- 140
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
+ +HRPR++ L +A D+LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 141 ---------LERFHRPRLEVLAQAAPDVLALETVPDADEARALLRAVRGL-GVPAWLSYS 190
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYP 300
D+ G+ + + ++IAVGVNC P V+ I + P+VVYP
Sbjct: 191 VSGDR-TRAGQPLQDAFALAADAD--EIIAVGVNCCAPEDVAGAIRTAARITGKPVVVYP 247
Query: 301 NSGE 304
NSGE
Sbjct: 248 NSGE 251
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 64/157 (40%), Gaps = 49/157 (31%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+++L+ + P L V + +LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 138 VDELERFHRPRLEVLAQAAPDVLALETVPDADEARALLRAVRGL-GVPAWLSYSVSGDRT 196
Query: 339 --------------------------CKTENI-------------PLVVYPNSGERYDAV 359
C E++ P+VVYPNSGE +DA
Sbjct: 197 RAGQPLQDAFALAADADEIIAVGVNCCAPEDVAGAIRTAARITGKPVVVYPNSGESWDAD 256
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+ W P V W D G L+GGCCR E
Sbjct: 257 SRTWHGDSRFTPA--RVRAWHDSGARLIGGCCRVGPE 291
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
++IAVGVNC P V+ I + P+VVYPNSGE +D
Sbjct: 214 EIIAVGVNCCAPEDVAGAIRTAARITGKPVVVYPNSGESWD 254
>gi|194466317|ref|ZP_03072304.1| homocysteine S-methyltransferase [Lactobacillus reuteri 100-23]
gi|194453353|gb|EDX42250.1| homocysteine S-methyltransferase [Lactobacillus reuteri 100-23]
Length = 310
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 163/390 (41%), Gaps = 113/390 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
LIDG S+ L D + LW++ LA V + H+++ KAGA + +T++YQA++
Sbjct: 13 LIDGAMSTALEQLGADT--NNSLWTASVLANQPALVKKVHQEYFKAGARLAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F+ ++ LI+ +V KE ARD
Sbjct: 71 PAFIRN-GYSKQEAHSLIQRAVALAKE----------------ARD-------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ E + + +AG++GPYGA L +GSEY GDY H
Sbjct: 100 -----------EYQQETGIYNY-------------VAGALGPYGAYLANGSEYTGDY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD 244
+S ++HRPR+ ++ G D++AIET P E L++E P+ ++SFS KD
Sbjct: 134 LSAIEYQQFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLVKELAPYILCYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
H+ +G ART + AVGVNC+ V++ IE + + + P++ YPNS
Sbjct: 194 STHLPDGTPLAVAARTVAKY--PNVFAVGVNCIPLEEVTAAIETVHQVTDKPVIAYPNSS 251
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
A+ + P K W YP+
Sbjct: 252 ----------ATYD-----------PTTKTW-------------SYPHG----------- 266
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R L + Y+ WL G+ ++GGCC T
Sbjct: 267 -RRGLVD----YLPQWLAAGLTIIGGCCTT 291
>gi|422845023|ref|ZP_16891733.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684805|gb|EGD26957.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 319
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 154/394 (39%), Gaps = 116/394 (29%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+
Sbjct: 24 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITD------- 74
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
SYQ S+ ++K ++ +A IR S
Sbjct: 75 ------------SYQASLSA--FMKHGLSEDAARGLIRE------------------SAA 102
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDI--LIAGSVGPYGASLRDGSEYRGDYVE 184
+ R D+ + A I +AGSVGPYGA L DGSEYRGDY
Sbjct: 103 VAIKARDDF------------------EKATGIHNFVAGSVGPYGAYLADGSEYRGDYA- 143
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ-MLCRLLREWPHQKAWLSFSCK 243
+S ++H PRI+ LV G D LA+ET P E + +L L ++P ++SFS K
Sbjct: 144 -LSHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDHLKAKYPDLPVYVSFSLK 202
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 203 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 260
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
P+ K W VYP + A
Sbjct: 261 AEYD---------------------PSVKKW-------------VYPPEAADFGQAGA-- 284
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DWL G LVGGCC T ED
Sbjct: 285 --------------DWLAAGAKLVGGCCTTMPED 304
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 203 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 260
Query: 570 ERYD 573
YD
Sbjct: 261 AEYD 264
>gi|343522122|ref|ZP_08759088.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 175
str. F0384]
gi|343401531|gb|EGV14037.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 175
str. F0384]
Length = 308
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 157/392 (40%), Gaps = 112/392 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D + LWS+ L TA D V + H D++ AGA ++ TN+YQA++
Sbjct: 11 VLDGAMGTELDARGIDTRNA--LWSARALTTAPDVVREVHSDYLDAGARVITTNTYQATL 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
LI S D AR ++ AG+ GA+
Sbjct: 69 --------------PALIHSGEDAAG-----------------ARRVIAAGARLAKGAAR 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
+ E+ P +L+AG +GPYGA L DGSEY G Y ++
Sbjct: 98 QFSKEH-----------------------PEEPVLVAGGLGPYGAYLADGSEYTGTYGID 134
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK 243
+ + E H PRI+ +V G D+ A+ET+P EA+ L ++ + P + W+SF +
Sbjct: 135 ILEDPGFQEVHLPRIEVMVGEGLDLFALETLPRLDEARALASMVTDLAPQAQCWVSFQVR 194
Query: 244 -DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPN 301
D +++G + A ++AVG+NCV P +V+ + L+ PLV YPN
Sbjct: 195 PDGSTLADGTPLAEAAAWAEQEE--IVVAVGINCVAPGVVARALPVLRAATGKPLVAYPN 252
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G+ YD
Sbjct: 253 VGDL--------------------------------------------------YDPATK 262
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W + + W+ EGV LVGGCCRT
Sbjct: 263 TWQSTGDGAGIPELAPSWIAEGVRLVGGCCRT 294
>gi|313123041|ref|YP_004033300.1| homocysteine/selenocysteine methylase
(s-methylmethionine-dependent) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279604|gb|ADQ60323.1| Homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 310
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 152/392 (38%), Gaps = 112/392 (28%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S L + D LW++ LA D V + H+++ KAGA + +T+
Sbjct: 15 LDGSMSMPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITD------- 65
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
SYQ S+ ++K ++ +A IR S
Sbjct: 66 ------------SYQASLSA--FMKHGLSEDAARGLIRE------------------SAA 93
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
+ R D+ + H + AGSVGPYGA L DGSEYRGDY +
Sbjct: 94 VAIKARDDFEKATGT------HNFV----------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSGAE 253
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
P+ K W VYP + A
Sbjct: 254 YD---------------------PSVKKW-------------VYPPEAADFGQAGA---- 275
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
DWL G LVGGCC T ED
Sbjct: 276 ------------DWLAAGAKLVGGCCTTMPED 295
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|374985977|ref|YP_004961472.1| homocysteine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297156629|gb|ADI06341.1| homocysteine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 308
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 159/388 (40%), Gaps = 116/388 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + + H + +AGA +++T+SYQA+
Sbjct: 18 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPRQIEEAHAAYARAGARVLITSSYQATY 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L+ +++ L++ SV+
Sbjct: 76 EGFARRGVLEKEAT-ALLERSVELA----------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R +E G V+ R + +A SVGPYGA L DGSEYRG Y
Sbjct: 100 RRAAEGAGGTVD-------------------RPVWVAASVGPYGAMLADGSEYRGRYGLS 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPRI+AL AG D+LA+ET+P + EA+ L R + E WLS+S +
Sbjct: 141 VGE--LERFHRPRIEALAAAGPDVLALETVPDADEAEALLRAV-EGCGIPVWLSYSIAGE 197
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
H G+ + DQ++AVGVNC P +E T P+VVYPNSGE
Sbjct: 198 -HTRAGQPLREA--FALAAGNDQVLAVGVNCCEPGDADRAVEVAATTTGKPVVVYPNSGE 254
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
EW DA W
Sbjct: 255 ----------------------EW----------------------------DAKARGWR 264
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCR 392
R +P V W D G L+GGCCR
Sbjct: 265 GRATFDPA--RVKAWRDAGARLIGGCCR 290
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
DQ++AVGVNC P +E T P+VVYPNSGE +D
Sbjct: 216 DQVLAVGVNCCEPGDADRAVEVAATTTGKPVVVYPNSGEEWD 257
>gi|289768223|ref|ZP_06527601.1| homocysteine methyltransferase [Streptomyces lividans TK24]
gi|289698422|gb|EFD65851.1| homocysteine methyltransferase [Streptomyces lividans TK24]
Length = 304
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 160/404 (39%), Gaps = 121/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ G LWS+ LA +A+ + H + +AGA++ +T+SYQA+
Sbjct: 15 VLDGGLSNQLEAAGHDL--GDALWSARLLAEDPEAITRAHLAYFEAGAEVAITSSYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + + +L+ SV +EA T R+ + +A S GPYGA L
Sbjct: 73 EGFAR-RGIGRERAAELLALSVASAREAARRARTARPERA------LWVAASAGPYGAML 125
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y
Sbjct: 126 ADGSEYRGRY-------------------------------------------------G 136
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ + +HRPR++ L A D+LA+ET+P + EA L R +R AWLS++ D
Sbjct: 137 LGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLRAVRGL-DVPAWLSYTVAGD 195
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A + D++IAVGVNC P VS +E + P+V YPN
Sbjct: 196 RTRAGQPLDEAFALAA------DADEVIAVGVNCCAPEDVSGAVETAARVTGKPVVAYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE +DA +
Sbjct: 250 SGET--------------------------------------------------WDARSR 259
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W R + V DW + G LVGGCCR E + L
Sbjct: 260 GW--RGRSSYTAERVRDWWERGARLVGGCCRVGPETITSIARAL 301
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+ D++IAVGVNC P VS +E + P+V YPNSGE +D
Sbjct: 212 DADEVIAVGVNCCAPEDVSGAVETAARVTGKPVVAYPNSGETWD 255
>gi|32141288|ref|NP_733689.1| homocysteine methyltransferase [Streptomyces coelicolor A3(2)]
gi|24413901|emb|CAD55372.1| putative transferase [Streptomyces coelicolor A3(2)]
Length = 304
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 160/404 (39%), Gaps = 121/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ G LWS+ LA +A+ + H + +AGA++ +T+SYQA+
Sbjct: 15 VLDGGLSNQLEAAGHDL--GDALWSARLLAEDPEAITRAHLAYFEAGAEVAITSSYQATF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + + +L+ SV +EA T R+ + +A S GPYGA L
Sbjct: 73 EGFAR-RGIGRERAAELLALSVASAREAARRARTARPERA------LWVAASAGPYGAML 125
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y
Sbjct: 126 ADGSEYRGRY-------------------------------------------------G 136
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ + +HRPR++ L A D+LA+ET+P + EA L R +R AWLS++ D
Sbjct: 137 LGRGALERFHRPRLEVLAAARPDVLALETVPDTDEAAALLRAVRGL-DVPAWLSYTVAGD 195
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A + D++IAVGVNC P VS +E + P+V YPN
Sbjct: 196 RTRAGQPLDEAFALAA------DVDEVIAVGVNCCAPEDVSGAVETAARVTGKPVVAYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE +DA +
Sbjct: 250 SGET--------------------------------------------------WDAKSR 259
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W R + V DW + G LVGGCCR E + L
Sbjct: 260 GW--RGRSSYTAERVRDWRERGARLVGGCCRVGPETITSIARAL 301
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
D++IAVGVNC P VS +E + P+V YPNSGE +D
Sbjct: 214 DEVIAVGVNCCAPEDVSGAVETAARVTGKPVVAYPNSGETWD 255
>gi|326773711|ref|ZP_08232994.1| homocysteine S-methyltransferase [Actinomyces viscosus C505]
gi|326636941|gb|EGE37844.1| homocysteine S-methyltransferase [Actinomyces viscosus C505]
Length = 325
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 156/392 (39%), Gaps = 112/392 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L D + LWS+ L A D V + H D++ AGA ++ TN+YQA++
Sbjct: 28 VLDGAMGTELDARGVDTRNA--LWSARALTMAPDVVREVHSDYLDAGARVITTNTYQATL 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
L++S D AR ++ AG+
Sbjct: 86 --------------PALVRSGEDAAG-----------------ARRVIAAGA-------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY-VE 184
EA + + P +L+AG +GPYGA L DGSEY G Y ++
Sbjct: 107 -----------RLAKEAA----RQFSKEHPEEPVLVAGGLGPYGAYLADGSEYTGAYGID 151
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK 243
+ + E H PRI+ L G D+ A+ET+P EA+ L +++ P + W+SF +
Sbjct: 152 ILEDPGFQEVHLPRIEVLAGEGIDLFALETLPRLDEARALASMVKGLAPQAECWVSFQVR 211
Query: 244 -DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPN 301
D +++G + A ++AVG+NCV P +V+ + L+ N PLV YPN
Sbjct: 212 PDGATLADGTPLAEAAAWAAQEE--IVVAVGINCVAPGVVARALPVLRAVTNKPLVAYPN 269
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
+G+ YD
Sbjct: 270 AGDL--------------------------------------------------YDPATK 279
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W + + W+D GV LVGGCCRT
Sbjct: 280 TWQSTGDGAGIPELAPSWIDAGVRLVGGCCRT 311
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
++AVG+NCV P +V+ + L+ N PLV YPN+G+ YD
Sbjct: 236 VVAVGINCVAPGVVARALPVLRAVTNKPLVAYPNAGDLYD 275
>gi|414597060|ref|ZP_11446631.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE E16]
gi|390482174|emb|CCF28692.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE E16]
Length = 303
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 168/397 (42%), Gaps = 122/397 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++ I + LWS+ L A + V H+ + AGA I + ++YQA
Sbjct: 14 ILDGGLGSEIDKQ--HIAVANNLWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ L + +Y+LI +V A
Sbjct: 72 QTFVDS-GLSENEAYELIDLAV-----------------------------------ALA 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RDG + SE ++ +IAGSVGPYGA L +G+EY GDY
Sbjct: 96 RDGLKK--------SEKSLG--------------IIAGSVGPYGAYLANGAEYTGDY--D 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+S +HR RI+ LV DILA+ET+P KEAQ + LL+ E+P +A+LSF+ +
Sbjct: 132 LSIQAYQAFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQNEFPEVEAYLSFATEV 191
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
H+ +G T++A N +Q+ A+G+NC P + I ++K + ++VYPN+
Sbjct: 192 GDHLWDG---TRLAHAVAYFNQFEQIKAIGINCTAPDNILPAIMRIKPNTDKKVIVYPNA 248
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE Y+ R
Sbjct: 249 GE--------------------------------------------------VYNPETKR 258
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAED 397
W+ + EP++ + V W G ++GGCCRT ED
Sbjct: 259 WVTNN--EPINWRRLVPLWQHAGADIIGGCCRTSPED 293
>gi|408829838|ref|ZP_11214728.1| homocysteine methyltransferase [Streptomyces somaliensis DSM 40738]
Length = 309
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 138/303 (45%), Gaps = 69/303 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ G LWS+ LA +A+V H + +AGAD+V T YQA+
Sbjct: 20 VLDGGLSNQLESAGHDL--GDDLWSARLLAEDPEALVAAHLAYYEAGADVVTTAGYQATF 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + +L+ SV+ V+EA +R + A S GPYGA L
Sbjct: 78 EGFARR-GVGRARAAELLALSVESVREAAVRARAAGV------SRPLWTAASAGPYGAML 130
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y + A + +H
Sbjct: 131 ADGSEYRGRY--GLGTAALEAFH------------------------------------- 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR++AL AG D+LA+ET+P + EA+ L R +R AWLS++
Sbjct: 152 ----------RPRLEALAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYTVAGG 200
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + G E+F A D+++AVGVNC P V +E + P+V YPN
Sbjct: 201 RTRAGGTLEEAFGLAAEA------DEIVAVGVNCCAPEEVLPAVETAARVSGKPVVAYPN 254
Query: 302 SGE 304
SGE
Sbjct: 255 SGE 257
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 57/149 (38%), Gaps = 48/149 (32%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------------- 338
+G +LA+ET+P + EA+ L R +R AWLS++
Sbjct: 161 AGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYTVAGGRTRAGGTLEEAFGLAAEAD 219
Query: 339 ---------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
C E + P+V YPNSGE +D V W R D+
Sbjct: 220 EIVAVGVNCCAPEEVLPAVETAARVSGKPVVAYPNSGETWDPVAGGWRGRSTFR-ADR-A 277
Query: 377 TDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+W G L+GGCCR + + RL
Sbjct: 278 EEWRRAGARLIGGCCRVGPDAVAALADRL 306
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
D+++AVGVNC P V P +E + P+V YPNSGE +D
Sbjct: 219 DEIVAVGVNCCAPEEVLPAVETAARVSGKPVVAYPNSGETWD 260
>gi|329947449|ref|ZP_08294653.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
gi|328525199|gb|EGF52250.1| homocysteine S-methyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
Length = 293
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 152/386 (39%), Gaps = 111/386 (28%)
Query: 23 IDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQ 81
+D H LWS+ L A +AV H D++ AGA ++ TN+YQA++ G +
Sbjct: 10 VDTHNALWSALALTAAPEAVYAVHTDYLDAGARVITTNTYQATLPGLRQ----------- 58
Query: 82 LIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 141
A H + ARD++ AG+ ++
Sbjct: 59 ----------------AGHDTVG----ARDVIAAGA--------------------RLAN 78
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE-ATMAEWHRPRIQ 200
+ R + P +L+AG +GPYGA L DGSEY G Y VSE + E H PRI+
Sbjct: 79 DAARCFER---EHPEEPVLVAGGLGPYGAYLADGSEYTGAYDVDVSEDSGFQEVHLPRIE 135
Query: 201 ALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKDDK-HISNGESFTQVA 258
LV G D+ A+ET+P EAQ L +++ P + W+SF + D +++G V
Sbjct: 136 VLVGEGVDLFALETLPRLNEAQALVTMVKGLSPQAECWVSFQVRPDGVRLADGTPL--VE 193
Query: 259 RTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGEHILAIETIPASKE 317
+ + ++AVGVNCV P +V + L+ PLV Y NSG++
Sbjct: 194 AAAWAAGEEAVVAVGVNCVAPDVVGRALPVLREVTAKPLVAYSNSGDN------------ 241
Query: 318 AQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVT 377
YD W D
Sbjct: 242 --------------------------------------YDPGTKTWKAGDEGGGFTALAP 263
Query: 378 DWLDEGVALVGGCCRTYAEDTLHMKH 403
W+ GV L+GGCCRT + H
Sbjct: 264 SWIAAGVRLIGGCCRTRPAQIREIAH 289
>gi|350272611|ref|YP_004883919.1| homocysteine S-methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348597453|dbj|BAL01414.1| homocysteine S-methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 319
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 159/400 (39%), Gaps = 123/400 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L D+ D LWS+ LA + + HRD+ +GAD + SYQA+I
Sbjct: 15 ILDGAMATELERKGLDLNDS--LWSARVLAEHPEVIQAVHRDYFVSGADCSTSASYQATI 72
Query: 66 GGFM-------EFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
GFM E +L S L+K+ ++ +E E T R+ L A +V
Sbjct: 73 PGFMASGYTRREAEELIARSMTLLLKARDEWWEE----EKTSGRLYP-------LAAAAV 121
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
GPYGA L +GSEY G+Y +E EY
Sbjct: 122 GPYGAYLANGSEYTGNY--SCTE----------------------------------KEY 145
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
R +H PR+Q L ++GA+I A+ET+P EA + C + E W+
Sbjct: 146 RA-------------FHMPRLQILKDSGAEIFALETMPRLDEA-LACAGMLEELDCDYWV 191
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLV 297
SF+ + + IS+G S ++A T L AVGVNC P V +I + ++P+
Sbjct: 192 SFTFRSPRQISDGTSVEEIAATLKGF--PHLKAVGVNCTPPAFVEGVIRNFRALTSLPIC 249
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPN GE YD
Sbjct: 250 VYPNRGEI--------------------------------------------------YD 259
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
AV W + + +W G ++GGCCRT ED
Sbjct: 260 AVTKTWNGSADGKTYGDWAQEWYRAGARVIGGCCRTRPED 299
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 512 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGE 570
+ IS+G S ++A T L AVGVNC P V +I + ++P+ VYPN GE
Sbjct: 199 RQISDGTSVEEIAATLKGF--PHLKAVGVNCTPPAFVEGVIRNFRALTSLPICVYPNRGE 256
Query: 571 RYD 573
YD
Sbjct: 257 IYD 259
>gi|401407288|ref|XP_003883093.1| GJ17676, related [Neospora caninum Liverpool]
gi|325117509|emb|CBZ53061.1| GJ17676, related [Neospora caninum Liverpool]
Length = 431
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 186/484 (38%), Gaps = 144/484 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V L+DGG + L +G +G PLW+S + A D V + H DF AGAD+ +T +YQ
Sbjct: 9 DVVLLDGGLGTHLRA-LGAEFNGDPLWASKAVLVAPDLVRRAHYDFYHAGADVAITATYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL----------------EATHARIRSD 106
AS+ GF + + L ++++ + +++ EA L E R+
Sbjct: 68 ASLTGFAK-IGLSPSNAHEAVALAINLAAEARQLDEDGDAPACSSAGDERENEGPEARTP 126
Query: 107 DPARDILIAG----------------------SVGPYGASLRDGSEYRGDYVEHVSEATM 144
+ G S G YG++L G+EYRG+Y VSE
Sbjct: 127 EAPSTAGKGGFQEVHARDADRPRRRRNRKIFVSNGSYGSALGGGAEYRGNY--GVSEEVF 184
Query: 145 AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE 204
++HR W R+QA +E
Sbjct: 185 HDYHR--------------------------------------------W---RLQAALE 197
Query: 205 AG--ADILAIETIPASKEAQMLCRLLREWP--HQKAWLSFSCKDDKHISNGESFTQV--- 257
D + ET+P S EA+ + LLRE+P K W+SF+CK ++NGE F
Sbjct: 198 LEHLVDGVVFETLPESAEAKAIVSLLREFPSLRGKTWISFTCKSPTQLANGEDFRSAVAD 257
Query: 258 -----ARTCYNMNPDQLIAVGVNCVR-----PLMVS-----SLIEQLKTE----NIPLVV 298
R CY + +GVNC+ PL+ S SL L+ N+ +V
Sbjct: 258 VLKLDGRDCY------ISGIGVNCLPVSTTVPLLCSPPLRDSLAVSLEKSRDPWNLHVVC 311
Query: 299 YPNS--GEHILAIETIP-------------ASKEAQMLCRLLREWPNQKAWLSFSCKTEN 343
YPN+ + A P A +E ++ R P + +L+ S
Sbjct: 312 YPNNEGARNAAATSAKPESPEVCQELVHGAAPRECDLVDRTTASAPTKMTYLAESAPDGQ 371
Query: 344 IPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
P N D L P+ V+ WL GV+ VGGCC T ED +
Sbjct: 372 CGHATLP--------ANPSSRDFSLKHPLASQVSAWLKGGVSAVGGCCGTSPEDVKEIGA 423
Query: 404 RLDD 407
L++
Sbjct: 424 VLEN 427
>gi|421876552|ref|ZP_16308108.1| Homocysteine S-methyltransferase [Leuconostoc citreum LBAE C10]
gi|372557629|emb|CCF24228.1| Homocysteine S-methyltransferase [Leuconostoc citreum LBAE C10]
Length = 304
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 168/397 (42%), Gaps = 122/397 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++ I + LWS+ L A + V H+ + AGA I + ++YQA
Sbjct: 14 ILDGGLGSEIDKQ--HIAVANNLWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ L + +Y+LI A+AL ARD L
Sbjct: 72 QTFVDS-GLSENEAYELIDL-------AVAL------------ARD------------GL 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ + G +IAGSVGPYGA L +G+EY GDY
Sbjct: 100 KKSEKSSG--------------------------IIAGSVGPYGAYLANGAEYTGDY--D 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+S +HR RI+ LV DILA+ET+P KEAQ + LL+ E+P +A+LSF+ +
Sbjct: 132 LSIQAYQVFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQNEFPEVEAYLSFATEA 191
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
H+ +G T++A N +Q+ A+G+NC P + I ++K + ++VYPN+
Sbjct: 192 GDHLWDG---TRLAHAVAYFNQFEQIKAIGINCTAPDNILPAITRIKPNTDKKVIVYPNA 248
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE Y+ R
Sbjct: 249 GE--------------------------------------------------VYNPETKR 258
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAED 397
W+ + EP++ + V W G ++GGCCRT ED
Sbjct: 259 WVTNN--EPINWRRLVPLWQHAGADIIGGCCRTSPED 293
>gi|383647984|ref|ZP_09958390.1| homocysteine methyltransferase [Streptomyces chartreusis NRRL
12338]
Length = 303
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 137/307 (44%), Gaps = 72/307 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ D LWS+ LA +A+ + H + +AGAD+ +T SY
Sbjct: 13 AGTVVLDGGMSNQLESAGHDLSD--ELWSARLLAQRPEAITEAHLAYFRAGADVAITASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ F F D D E +AL AR
Sbjct: 71 QAT---FEGFAKRGIDH---------DRAAELMALSVELAR------------------- 99
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
E RL R + +A S GPYGA L DGSEYRG
Sbjct: 100 ------------------------EAARLARVP--RPLWVAASAGPYGAMLADGSEYRGR 133
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V E + +HRPR++ L A D+LA+ET+P + EA L R +R AWL++S
Sbjct: 134 YGLTVDE--LERFHRPRLEVLAAARPDVLALETVPDADEAAALLRAVRGL-GVPAWLTYS 190
Query: 242 CKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMV-SSLIEQLKTENIPLV 297
+ + E+F A + D++IAVGVNC P V ++ + P+V
Sbjct: 191 VAGGRTRAGQPLEEAFALAA------DADEVIAVGVNCCAPEDVDTAAATAARVTGKPVV 244
Query: 298 VYPNSGE 304
VYPNSGE
Sbjct: 245 VYPNSGE 251
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 48/136 (35%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ET+P + EA L R +R AWL++S
Sbjct: 159 VLALETVPDADEAAALLRAVRGL-GVPAWLTYSVAGGRTRAGQPLEEAFALAADADEVIA 217
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C E++ P+VVYPNSGE ++A W R V W
Sbjct: 218 VGVNCCAPEDVDTAAATAARVTGKPVVVYPNSGETWNADARAWTGRSTF--TAGQVKGWQ 275
Query: 381 DEGVALVGGCCRTYAE 396
G L+GGCCR E
Sbjct: 276 QSGARLIGGCCRVGPE 291
>gi|41408377|ref|NP_961213.1| homocysteine methyltransferase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396733|gb|AAS04596.1| hypothetical protein MAP_2279 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 306
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 140/321 (43%), Gaps = 70/321 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A +V H + +A
Sbjct: 15 LLDGGLATELEARGHDLSD--PLWSARLLADAPQEIVAVHAAYFRA-------------- 58
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G M Y +S++ + I+ T +R R + +A +
Sbjct: 59 -GAMIATTASYQASFE------GFAARGISRSDTAGLLR-----RSVELAKAA------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD + G +A SVGPYGA+L DGSEYRG Y
Sbjct: 100 RDEAGVAGH--------------------------VAASVGPYGAALADGSEYRGRY--G 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + +WHRPR++ L A AD+LA+ETIP EA+ L L+R AWLS++ D
Sbjct: 132 ISVRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTI-DG 189
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H G+ + +++AVGVNC P V IE P++VYPNSGEH
Sbjct: 190 AHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEH 247
Query: 306 ILAIE---TIPASKEAQMLCR 323
A+ T P+ A + R
Sbjct: 248 WNALRHNWTGPSRFSAPLAAR 268
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 50/168 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+ QL+ + P L V + +LA+ETIP EA+ L L+R AWLS++
Sbjct: 134 VRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTIDGAHT 192
Query: 339 --------------------------CKTENI------------PLVVYPNSGERYDAVN 360
C +++ P++VYPNSGE ++A+
Sbjct: 193 RAGQPLADAFAVAAGVPEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEHWNALR 252
Query: 361 ARWIDRD-LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W P+ W+ G +VGGCC+ D ++ D
Sbjct: 253 HNWTGPSRFSAPL---AARWISAGARIVGGCCQVRPTDIAAVRRACSD 297
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D H G+ + +++AVGVNC P V P IE P++VYPNSG
Sbjct: 188 DGAHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSG 245
Query: 570 ERYD 573
E ++
Sbjct: 246 EHWN 249
>gi|170016909|ref|YP_001727828.1| homocysteine methyltransferase [Leuconostoc citreum KM20]
gi|169803766|gb|ACA82384.1| Homocysteine S-methyltransferase [Leuconostoc citreum KM20]
Length = 303
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 168/397 (42%), Gaps = 122/397 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++ I + LWS+ L A + V H+ + AGA I + ++YQA
Sbjct: 14 ILDGGLGSEIDKQ--HIAVANNLWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ L + +Y+LI +V A
Sbjct: 72 QTFVDS-GLSENEAYELIDLAV-----------------------------------ALA 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RDG + SE ++ +IAGSVGPYGA L +G+EY GDY
Sbjct: 96 RDGLKK--------SEKSLG--------------IIAGSVGPYGAYLANGAEYTGDY--D 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+S +HR RI+ LV DILA+ET+P KEAQ + LL+ E+P +A+LSF+ +
Sbjct: 132 LSIQAYQAFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQNEFPEVEAYLSFATEV 191
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
H+ +G T++A N +Q+ A+G+NC P + I ++K + +++YPN+
Sbjct: 192 GDHLWDG---TRLAHAVAYFNQFEQIKAIGINCTAPDNILPAIMRIKPNTDKKVILYPNA 248
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE Y+ R
Sbjct: 249 GE--------------------------------------------------VYNPETKR 258
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAED 397
W+ + EP++ + V W G ++GGCCRT ED
Sbjct: 259 WVTNN--EPINWRRLVPLWQHAGADIIGGCCRTSPED 293
>gi|302541970|ref|ZP_07294312.1| homocysteine S-methyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459588|gb|EFL22681.1| homocysteine S-methyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 306
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 153/388 (39%), Gaps = 117/388 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + H +++AGA +++T+SYQA+
Sbjct: 19 VLDGGLSNQLEAQGCDLSD--ELWSARLLADDPGQIEAAHAAYVRAGARVLITSSYQATY 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + + L+ SV+ + A A A +A SVGPYGA L
Sbjct: 77 EGFA-HRGVAREDATALLGRSVELARGAARGAAAPAAPVW--------VAASVGPYGAML 127
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y V+E
Sbjct: 128 ADGSEYRGRYGLSVAE-------------------------------------------- 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +HRPRI+ALV AG D+LA+ET+P + EA + R + E WLS+S +
Sbjct: 144 -----LERFHRPRIEALVAAGPDVLALETVPDADEAAAMLRAV-EGSGVPVWLSYSIAGE 197
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ A N +Q+IAVG+NC P +E +T P+VVYPNSGE
Sbjct: 198 ATRAGQPLREAFAVAAGN---EQVIAVGINCCEPGDADRAVEIAAETTGKPVVVYPNSGE 254
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
EW DA W
Sbjct: 255 ----------------------EW----------------------------DATARSWR 264
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCR 392
R +P V W D G L+GGCCR
Sbjct: 265 GRSTFDPA--RVKGWRDAGARLIGGCCR 290
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+Q+IAVG+NC P +E +T P+VVYPNSGE +D
Sbjct: 216 EQVIAVGINCCEPGDADRAVEIAAETTGKPVVVYPNSGEEWD 257
>gi|417750211|ref|ZP_12398580.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|336458287|gb|EGO37267.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium avium
subsp. paratuberculosis S397]
Length = 306
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 132/300 (44%), Gaps = 67/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A +V H + +A
Sbjct: 15 LLDGGLATELEARGHDLSD--PLWSARLLADAPQEIVAVHAAYFRA-------------- 58
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G M Y +S++ + I+ T +R R + +A +
Sbjct: 59 -GAMIATTASYQASFE------GFAARGISRSDTAGLLR-----RSVELAKAA------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD + G +A SVGPYGA+L DGSEYRG Y
Sbjct: 100 RDEAGVAGH--------------------------VAASVGPYGAALADGSEYRGRY--G 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+S + +WHRPR++ L A AD+LA+ETIP EA+ L L+R AWLS++ D
Sbjct: 132 ISVRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTI-DG 189
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H G+ + +++AVGVNC P V IE P++VYPNSGEH
Sbjct: 190 AHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEH 247
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 50/168 (29%)
Query: 286 IEQLKTENIP-LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS------ 338
+ QL+ + P L V + +LA+ETIP EA+ L L+R AWLS++
Sbjct: 134 VRQLEDWHRPRLEVLAGADADVLAVETIPDVDEAEALVNLVRSL-GVPAWLSYTIDGAHT 192
Query: 339 --------------------------CKTENI------------PLVVYPNSGERYDAVN 360
C +++ P++VYPNSGE +DA+
Sbjct: 193 RAGQPLADAFAVAAGVPEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSGEHWDALR 252
Query: 361 ARWIDRD-LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W P+ W+ G +VGGCC+ D ++ D
Sbjct: 253 HNWTGPSRFSAPL---AARWISAGARIVGGCCQVRPTDIAAVRRACSD 297
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D H G+ + +++AVGVNC P V P IE P++VYPNSG
Sbjct: 188 DGAHTRAGQPLADAFAVAAGV--PEIVAVGVNCCAPDDVLPTIEIAAAIGKPVIVYPNSG 245
Query: 570 ERYD 573
E +D
Sbjct: 246 EHWD 249
>gi|291436474|ref|ZP_06575864.1| homocysteine methyltransferase [Streptomyces ghanaensis ATCC 14672]
gi|291339369|gb|EFE66325.1| homocysteine methyltransferase [Streptomyces ghanaensis ATCC 14672]
Length = 304
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 136/300 (45%), Gaps = 66/300 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL++ D+ D LWS+ LA +AV H + +AGAD+ +T SYQA+
Sbjct: 18 VLDGGMSNQLASAGHDLSD--ELWSARLLAEDPEAVTAAHLAYFEAGADVAITASYQATF 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + +L+ A+++E R AR + +A SVGPYGA L
Sbjct: 76 EGFAR-RGIGRGRAAELL---------ALSVECAREAARRARAARPLWVAASVGPYGAML 125
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y V+E
Sbjct: 126 ADGSEYRGRYGLSVAE-------------------------------------------- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ +HRPR + L A D+LA+ETIP + EA+ L R+LR AWLS+S D
Sbjct: 142 -----LERFHRPRTEVLAAARPDVLALETIPDTDEAEALLRVLRGL-GTPAWLSYSAAGD 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ G+ + + ++IAVGVNC P + + P+VVYPNSGE
Sbjct: 196 R-TRAGQPLEDAFALAADAD--EVIAVGVNCCTPEDADRAVALAARVTGKPVVVYPNSGE 252
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 52/136 (38%), Gaps = 48/136 (35%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ETIP + EA+ L R+LR AWLS+S
Sbjct: 160 VLALETIPDTDEAEALLRVLRGL-GTPAWLSYSAAGDRTRAGQPLEDAFALAADADEVIA 218
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C E+ P+VVYPNSGE +D W R V W
Sbjct: 219 VGVNCCTPEDADRAVALAARVTGKPVVVYPNSGETWDTGARAWTGRPTF--TAGRVAGWR 276
Query: 381 DEGVALVGGCCRTYAE 396
+ G LVGGCCR E
Sbjct: 277 ESGARLVGGCCRVGPE 292
>gi|345854380|ref|ZP_08807214.1| homocysteine methyltransferase [Streptomyces zinciresistens K42]
gi|345634165|gb|EGX55838.1| homocysteine methyltransferase [Streptomyces zinciresistens K42]
Length = 304
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 135/303 (44%), Gaps = 69/303 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + +A+ + H + +AGAD+ +T S
Sbjct: 17 VLDGGMSNQLEAAGHDLSDA--LWSARLLAESPEAITRAHLAYFEAGADVAITAS----- 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y ++++ + + I
Sbjct: 70 ----------YQATFE------GFARRGI------------------------------- 82
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
G E + + E+ R T AR + +A S GPYGA L DGSEYRG Y
Sbjct: 83 --GRERAAELLALSVESAREAARRARTGGIARALWVAASAGPYGAMLADGSEYRGRYGLS 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L AG D LA+ET+P S EA+ L R +R WLS+S
Sbjct: 141 VAE--LERFHRPRLEVLAAAGPDALALETVPDSDEAEALLRAVRGL-GVPVWLSYSVAGG 197
Query: 246 KHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
+ + E+F A + D++IAVGVNC P V + + P+V YPN
Sbjct: 198 RTRAGQPLEEAFALAA------DADEVIAVGVNCCAPRDVEGAVATAARVTGRPVVAYPN 251
Query: 302 SGE 304
SGE
Sbjct: 252 SGE 254
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 52/142 (36%), Gaps = 48/142 (33%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V +G LA+ET+P S EA+ L R +R WLS+S
Sbjct: 152 LEVLAAAGPDALALETVPDSDEAEALLRAVRGL-GVPVWLSYSVAGGRTRAGQPLEEAFA 210
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCE 370
C ++ P+V YPNSGE +DA W R
Sbjct: 211 LAADADEVIAVGVNCCAPRDVEGAVATAARVTGRPVVAYPNSGESWDAEARTWHGRPAFS 270
Query: 371 PVDKYVTDWLDEGVALVGGCCR 392
P V W G L+GGCCR
Sbjct: 271 P--DQVRTWRAAGARLIGGCCR 290
>gi|386382408|ref|ZP_10068021.1| homocysteine methyltransferase [Streptomyces tsukubaensis
NRRL18488]
gi|385670166|gb|EIF93296.1| homocysteine methyltransferase [Streptomyces tsukubaensis
NRRL18488]
Length = 312
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 150/392 (38%), Gaps = 128/392 (32%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +S+L D+ LWS+ L + HR +++AGA +++T S
Sbjct: 17 VLDGGLASRLEEQGSDL--SGELWSARLLTEDPGRIEAAHRAYVRAGARVLITAS----- 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +SY+ EA L A R+
Sbjct: 70 ----------YQASYEAFARRGMTRTEAGRLFARSVRL---------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R ++ A ++ +A SVGPYGA L DGSEYRG Y
Sbjct: 98 ----------------------ARAAAEETADEVWVAASVGPYGAVLADGSEYRGRYGLT 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPR++AL A D+LA+ET+P + EA+ L R E WLS++
Sbjct: 136 VRE--LERFHRPRVEALAAADPDVLALETVPDTDEAEALLRAA-EGCGVPVWLSYTVSGT 192
Query: 246 KHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+ G+S T + + DQ+IA GVNC P
Sbjct: 193 R-TRAGQSLD----TAFGLVRGLDQVIAAGVNCCEP------------------------ 223
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
P+ A ++ + + P+V YPNSGE +DA W
Sbjct: 224 -------------------------PDTTAAVTRAARLTGKPVVAYPNSGEAWDARRRAW 258
Query: 364 IDRDLCEPVD---KYVTDWLDEGVALVGGCCR 392
PV V DWL G LVGGCCR
Sbjct: 259 TG-----PVTYSAHRVADWLGAGARLVGGCCR 285
>gi|118466904|ref|YP_880942.1| homocysteine methyltransferase [Mycobacterium avium 104]
gi|118168191|gb|ABK69088.1| homocysteine S-methyltransferase [Mycobacterium avium 104]
Length = 291
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 160/402 (39%), Gaps = 121/402 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +++L D+ D PLWS+ LA A + H + +AGA I T SYQAS
Sbjct: 2 LLDGGLATELEARGHDLSD--PLWSARLLADAPQEIGAVHAAYFRAGAMIATTASYQASF 59
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + L++ SV+ K ARD
Sbjct: 60 EGFAA-RGISRSDTAGLLRRSVELAKA----------------ARD-------------- 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EA +A + +A SVGPYGA+L DGSEYRG Y
Sbjct: 89 ---------------EAGVAGY-------------VAASVGPYGAALADGSEYRGRYGLS 120
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V + + +WHRPR++ L +A AD+LA ETIP EA+ L L+R AWLS++ D
Sbjct: 121 VRQ--LEDWHRPRLEVLADADADVLAAETIPDVDEAEALVNLVRSL-GVPAWLSYTI-DG 176
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEH 305
H G+ +++A GVNC P V I + P++VYPNSGEH
Sbjct: 177 AHTRAGQPLADAFAVAAGA--PEIVAFGVNCCAPDDVLPAIGPARAVGKPVIVYPNSGEH 234
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
W + +AW S ++ A
Sbjct: 235 ----------------------W-DGRAWTGRS----------------KFSA------- 248
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
+ + W+ G +VGGCCR D ++ D
Sbjct: 249 --------ELASQWISAGARIVGGCCRVRPTDIAAVRRACSD 282
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
+++A GVNC P V P I + P++VYPNSGE +D
Sbjct: 197 EIVAFGVNCCAPDDVLPAIGPARAVGKPVIVYPNSGEHWD 236
>gi|238878738|gb|EEQ42376.1| hypothetical protein CAWG_00585 [Candida albicans WO-1]
Length = 311
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 143/305 (46%), Gaps = 70/305 (22%)
Query: 6 LIDGGFSSQL-------STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+IDG ++L STY+ G PLWS L T + V Q H D+I AGAD+++T
Sbjct: 14 VIDGALGTELERLLPTTSTYLPS---GSPLWSGQVLITNPELVEQVHLDYINAGADMIIT 70
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
++YQ S Y S ++ I +D +AIAL + + + +
Sbjct: 71 STYQTS-----------YASLHKYIGYDMD---QAIALWNSALNVAKNAVKK-------- 108
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
S RD D++IAGS+GPY L +GSEY
Sbjct: 109 -----SGRD------------------------------DVIIAGSIGPYATLLANGSEY 133
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
GDY + V++ + E+H P + + DI+ IETIP+ +E +++ L +++ ++ ++
Sbjct: 134 NGDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFI 192
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
S + + +S+G S +VA+ +N + +AVG+NC V + L + PL +
Sbjct: 193 SINPQTGSALSDGTSLIEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--DFPLFI 250
Query: 299 YPNSG 303
YPN G
Sbjct: 251 YPNLG 255
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 410 SGLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRD--FIKGS----------------- 449
+ L Y+G D+ LW+S L AK+AV ++ RD I GS
Sbjct: 78 ASLHKYIGYDMDQAIALWNSA-LNVAKNAVKKSGRDDVIIAGSIGPYATLLANGSEYNGD 136
Query: 450 ---QTNDFLRDYNSP------NLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTL 500
T++ L +Y++P N +D E + + + + ++ G + Y
Sbjct: 137 YQGVTDEELIEYHTPLFEFYENSDVDIICIETIPSF------QELKVIIGLAKKYTSKEF 190
Query: 501 HMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI 560
+ ++ +S+G S +VA+ +N + +AVG+NC V + L +
Sbjct: 191 FIS--INPQTGSALSDGTSLIEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--DF 246
Query: 561 PLVVYPNSGERYD 573
PL +YPN G YD
Sbjct: 247 PLFIYPNLGFVYD 259
>gi|428182136|gb|EKX50998.1| hypothetical protein GUITHDRAFT_66436 [Guillardia theta CCMP2712]
Length = 327
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 164/408 (40%), Gaps = 110/408 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++Q+ D+ GH LWS+ L + +TH F AGAD+V++ SYQ ++
Sbjct: 20 VLDGGQATQMEREGVDL-SGH-LWSARLLCDNPAMIKKTHVAFFLAGADVVVSASYQGTV 77
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF K A G S
Sbjct: 78 EGF----------------------KRA----------------------------GMSE 87
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITD--DPARDILIAG-SVGPYGASLRDGSEYRGDY 182
+G ++ + EA W +++ D R AG SVG Y ASL DGSEY G
Sbjct: 88 EEGKRLLRFSIQLIKEARNEAWEQMVKDGSSAGRIKPFAGASVGCYAASLADGSEYTGSS 147
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE----WPHQKAWL 238
++ + +H R++ E D+ A ETIP E + + +L + + AW+
Sbjct: 148 Y-GITPEELRGFHLERLKLFAEEAPDVFAFETIPNMMEVEAIIDVLNDPQILATNIPAWI 206
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLV 297
S CKDD+ +S+ ES + A+ + L++VGVNCV P V ++ ++ ++PLV
Sbjct: 207 SVCCKDDETLSSDESVEEFAKFVAS-RTRLLVSVGVNCVHPRHVEKILSTMRAYCDLPLV 265
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPN GE REW +P G D
Sbjct: 266 VYPNKGEKFDTAR---------------REW---------------VP-------GTAMD 288
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D D C+ D W G ++GGCCRT + ++ RL
Sbjct: 289 -------DEDFCKLSDS----WRANGATMIGGCCRTSVDTIRLLRERL 325
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
DD+ +S+ ES + A+ + L++VGVNCV P V ++ ++ ++PLVVYPN
Sbjct: 212 DDETLSSDESVEEFAKFVAS-RTRLLVSVGVNCVHPRHVEKILSTMRAYCDLPLVVYPNK 270
Query: 569 GERYD 573
GE++D
Sbjct: 271 GEKFD 275
>gi|294632091|ref|ZP_06710651.1| homocysteine S-methyltransferase [Streptomyces sp. e14]
gi|292835424|gb|EFF93773.1| homocysteine S-methyltransferase [Streptomyces sp. e14]
Length = 309
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 156/405 (38%), Gaps = 118/405 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL T D+ D LWS+ LA +AV + H + AGAD+V+T SYQA+
Sbjct: 19 VLDGGLSNQLETAGHDLGDA--LWSARLLAERPEAVTEAHLAYFTAGADVVITASYQATF 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF A R RS PA
Sbjct: 77 EGFRPARG-----------------------SAGSGRPRSSRPA--------------WT 99
Query: 126 RDGSEYRGDYVEHVSEATMAE--WHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
G+ Y G H A+ W R GPYGA L DGSEYRG Y
Sbjct: 100 SPGTRYGG----HAPRASHGRCGWPR--------------RPGPYGAMLADGSEYRGRY- 140
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
++ + +HRPR++ L A D+LA+ET+P + EA+ L R +R AWLS++
Sbjct: 141 -GLTAGELERFHRPRLEVLAAARPDVLALETVPDADEARALLRAVRGL-GVPAWLSYTVA 198
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPNS 302
+ G+ + D++IAVGVNC P +++ + P+VVYPNS
Sbjct: 199 GPR-TRAGQPLEEAFAPAAAA--DEVIAVGVNCCDPEDADAAVATAARVTGKPVVVYPNS 255
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE AW DA
Sbjct: 256 GE----------------------------AW----------------------DAGARA 265
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W R D+ VT W G L+GGCCR E + L D
Sbjct: 266 WSGRPSFH-ADR-VTRWRAFGARLIGGCCRVGPETITEIARTLSD 308
>gi|56207592|emb|CAI21299.1| novel protein containing a homocysteine S-methyltransferase domain
[Danio rerio]
Length = 140
Score = 118 bits (295), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/107 (50%), Positives = 77/107 (71%), Gaps = 9/107 (8%)
Query: 137 EHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHR 196
E +S++ M++ R+ L+AGSVGPYG+ L DGSEY G Y + ++ + +WHR
Sbjct: 31 EFISQSPMSD---------RREPLVAGSVGPYGSFLHDGSEYTGAYEDKMTVEELKDWHR 81
Query: 197 PRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
P+IQ LV+AGAD++A+ETIP KEA+ L ++L+E+P KAWLSFSCK
Sbjct: 82 PQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSCK 128
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 286 IEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
+E+LK + P + +G ++A+ETIP KEA+ L ++L+E+P KAWLSFSCK +I
Sbjct: 73 VEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVKVLKEFPETKAWLSFSCKVTHI 132
Query: 345 PLVVYP 350
P
Sbjct: 133 NAYALP 138
>gi|421878240|ref|ZP_16309722.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE C11]
gi|390447854|emb|CCF25842.1| Homocysteine methyltransferase [Leuconostoc citreum LBAE C11]
Length = 304
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 168/397 (42%), Gaps = 122/397 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++ I + LWS+ L A + V H+ + AGA I + ++YQA
Sbjct: 14 ILDGGLGSEIDKQ--HIAVANNLWSASALIQAPNLVRDIHQSYFNAGAQIAIVDTYQAHP 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ L + +Y+LI A+AL ARD L
Sbjct: 72 QTFVDS-GLSENEAYELIDL-------AVAL------------ARD------------GL 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ + G +IAGSVGPYGA L +G+EY GDY
Sbjct: 100 KKSEKSSG--------------------------IIAGSVGPYGAYLANGAEYTGDY--D 131
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
+S +HR RI+ LV DILA+ET+P KEAQ + LL+ E+P +A+LSF+ +
Sbjct: 132 LSIQAYQAFHRQRIKRLVHNNVDILALETMPNFKEAQAIALLLQNEFPEVEAYLSFATEA 191
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
++ +G T++A N +Q+ A+G+NC P + I ++K + ++VYPN+
Sbjct: 192 GDYLWDG---TRLAHAVAYFNQFEQIKAIGINCTAPDNILPAITRIKPNTDKKVIVYPNA 248
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE Y+ R
Sbjct: 249 GE--------------------------------------------------VYNPETKR 258
Query: 363 WIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAED 397
W+ + EP++ + V W G ++GGCCRT ED
Sbjct: 259 WVTNN--EPINWRRLVPLWQHAGADIIGGCCRTSPED 293
>gi|377575362|ref|ZP_09804356.1| homocysteine S-methyltransferase [Mobilicoccus pelagius NBRC
104925]
gi|377535939|dbj|GAB49521.1| homocysteine S-methyltransferase [Mobilicoccus pelagius NBRC
104925]
Length = 319
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 138/304 (45%), Gaps = 61/304 (20%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V + DGG ++QL D+ID LWS+ L +A+V+ H F++AGA IV T SYQ
Sbjct: 19 EVWVADGGLATQLEAMGHDLID--ALWSARLLHDDPEAIVEAHLHFLRAGARIVTTASYQ 76
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF +D D + Q ++ SVD +EA+ R+ L+A SVGPYG
Sbjct: 77 ATDEGFAAA-GMDADETTQFLRRSVDLAREAVDRHVADGGTRA-------LVAASVGPYG 128
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A L DGSEYRG Y ++ A + E+H D ++AG V
Sbjct: 129 AMLADGSEYRGRY--GLTVADLREFHARRVD------VLAGEV----------------- 163
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+ GAD+LA+ETIP E L LL W+S +
Sbjct: 164 --------------------ADGGADLLALETIPDVDEVVALTDLLGA-AGVPGWVSCTV 202
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT--ENIPLVVYP 300
+ + G+ + +++A+G NC P V ++++ + T P VVYP
Sbjct: 203 EAGR-TRAGQPLADAVAAAADTG--EVVAIGANCCAPRDVEAVLDAVATAGRGRPAVVYP 259
Query: 301 NSGE 304
NSGE
Sbjct: 260 NSGE 263
>gi|260951339|ref|XP_002619966.1| hypothetical protein CLUG_01125 [Clavispora lusitaniae ATCC 42720]
gi|238847538|gb|EEQ37002.1| hypothetical protein CLUG_01125 [Clavispora lusitaniae ATCC 42720]
Length = 329
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 78/321 (24%)
Query: 3 NVKLIDGGFSSQLSTYVG----DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+V + DG +QL + + G PLWS+ L + + + H+ +++AGAD+++T
Sbjct: 10 SVLVQDGALGTQLEALIPLDDPHSVKGSPLWSTNALLYSPELISSIHKQYVEAGADMIIT 69
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQAS ++ ++D + ++ SV+ ALEAT
Sbjct: 70 ATYQASPQTLSKYENMDLAQAKKVWTKSVE-----CALEATRTH---------------- 108
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
P + I I GS+GPYGA L +G+EY
Sbjct: 109 ------------------------------------PEKKIFIGGSIGPYGAYLANGAEY 132
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREW----PH 233
GDY + +S + ++HR ++ E D++A ET+P E Q + L+ + H
Sbjct: 133 SGDYGD-ISSDQLMDYHRDIVRFYAETKEVDVIAFETVPNFAEVQAIFSLIEQMFNANLH 191
Query: 234 QKAWLSFSCKDDKHISNGESFTQVARTCYNMN----PDQLIAVGVNCVRPLMVSSLIEQL 289
++ ++S SCKD H+ +G QV R + D L+ +G NCV +VS IE +
Sbjct: 192 KEFYVSLSCKDADHLVDGTPLEQVIRYILSKKSSQISDNLVGIGCNCVPFEIVSDFIETV 251
Query: 290 K-------TENIPLVVYPNSG 303
+E + L+VYPN G
Sbjct: 252 NRVCQNNGSEQLSLLVYPNLG 272
>gi|354614908|ref|ZP_09032733.1| Homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
gi|353220737|gb|EHB85150.1| Homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
Length = 310
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 154/402 (38%), Gaps = 118/402 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG +S L ++ D LWS+ L A + +V HR F +AGA + T SYQ
Sbjct: 19 TVTVLDGGLASALEARGHELTDA--LWSARLLLDAPEEIVAAHRAFYRAGARVATTASYQ 76
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS + LD S ++++ SVD EA A A + ++ +A SVGPYG
Sbjct: 77 ASFDRLAAY-GLDRHESARVLRRSVDLAHEARATAAAAS---------ELWVAASVGPYG 126
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A+L DGSE+ G Y V + WH
Sbjct: 127 AALADGSEFHGRY--GVGVPALRRWH---------------------------------- 150
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
RPRI+ L EAG D+LA+ET+P EA+ L R + E AWL+F+
Sbjct: 151 -------------RPRIEVLAEAGPDVLALETVPDVDEAEALVRAV-EGVGLPAWLTFNV 196
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPN 301
D G+ + + +++AVGVNC P V + + P+V YPN
Sbjct: 197 -DGGRTRAGQPMAEAFAVAADA--PEVVAVGVNCCAPAEVPDAVACAREVTGKPVVAYPN 253
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE A R+W RY A +A
Sbjct: 254 SGEGWDAHR---------------RDWTGPT----------------------RYRATDA 276
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
WL G L+GGCCR D +
Sbjct: 277 ---------------PTWLAAGATLLGGCCRVLPTDIARLAE 303
>gi|375103105|ref|ZP_09749368.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora cyanea
NA-134]
gi|374663837|gb|EHR63715.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Saccharomonospora cyanea
NA-134]
Length = 343
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 155/392 (39%), Gaps = 119/392 (30%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGG +++L D+ D LWS+ L A +V HR F +AGA + T SYQAS G
Sbjct: 55 DGGLATELEARGHDLTDA--LWSARLLLDAPGEIVAAHRAFYEAGAVVATTASYQASFPG 112
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD 127
F E LD L+ SV ++A
Sbjct: 113 FAER-GLDRGEVATLLHRSVALARQA---------------------------------- 137
Query: 128 GSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS 187
G E GD R +A SVGPYGA+L DGSEYRGDY ++
Sbjct: 138 GDEVSGD---------------------GRRRFVAASVGPYGAALADGSEYRGDY--GLT 174
Query: 188 EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
A + +WH PR++ L EA D+LA+ETIP EA+ L L AWL+++ D+
Sbjct: 175 VAQLRDWHLPRLETLAEAEPDLLAVETIPDVVEAEALVGALAGL-DVPAWLAYTVDGDR- 232
Query: 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHI 306
G+ + + +++AVGVNC P V+ I + + P+VVYPNSGE
Sbjct: 233 TRAGQPLAEAFAVAAAAD--EVVAVGVNCCAPADVTPAIACARAVTDKPVVVYPNSGE-- 288
Query: 307 LAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID 365
W Q+ W S RY AR
Sbjct: 289 --------------------SWDARQRTWTGPS----------------RYSPELAR--- 309
Query: 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W+ EG +VGGCCR D
Sbjct: 310 ------------QWVAEGARVVGGCCRVRPSD 329
>gi|433648914|ref|YP_007293916.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium smegmatis
JS623]
gi|433298691|gb|AGB24511.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Mycobacterium smegmatis
JS623]
Length = 294
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 132/303 (43%), Gaps = 68/303 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V + DGG +++L D+ D LWS+ L A A+V H F +AGA I T SYQ
Sbjct: 9 TVLIADGGLATELEARGHDLSD--DLWSARLLVDAPAAIVAVHCAFFRAGASIATTASYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS GF E + + +L++ SV ++A D+ D +A SVGPYG
Sbjct: 67 ASFDGFAE-RGISRTEAERLMRRSVALARDA-----------RDEVGGDGWVAASVGPYG 114
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A+L G EY G Y VS+ +A WHR
Sbjct: 115 AALAHGEEYVGRYGLTVSQ--LANWHR--------------------------------- 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
PR++ LV A D+LA+ET+P EA+ L L+ E AWLS++
Sbjct: 140 --------------PRLEVLVAAEPDVLALETVPDVDEAEALVTLVHEL-GVPAWLSYTI 184
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPN 301
G+ + +M +++AVGVNC P V + + P++VYPN
Sbjct: 185 TGTT-TRAGQPLAEAFAVASDMP--EIVAVGVNCCAPADVEDAVRVAREVTGKPVIVYPN 241
Query: 302 SGE 304
SGE
Sbjct: 242 SGE 244
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 126/316 (39%), Gaps = 68/316 (21%)
Query: 101 ARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEA-TMAEWHRLIT------- 152
AR+ D PA + + + GAS+ + Y+ + + E RL+
Sbjct: 35 ARLLVDAPAAIVAVHCAFFRAGASIATTASYQASFDGFAERGISRTEAERLMRRSVALAR 94
Query: 153 ---DDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADI 209
D+ D +A SVGPYGA+L G EY G Y VS+ +A WHRPR++ LV A D+
Sbjct: 95 DARDEVGGDGWVAASVGPYGAALAHGEEYVGRYGLTVSQ--LANWHRPRLEVLVAAEPDV 152
Query: 210 LAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQL 269
LA+ET+P EA+ L L+ E AWLS++ G+ + +M ++
Sbjct: 153 LALETVPDVDEAEALVTLVHEL-GVPAWLSYTITGTT-TRAGQPLAEAFAVASDMP--EI 208
Query: 270 IAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWP 329
+AVGVNC P V + R+ RE
Sbjct: 209 VAVGVNCCAPADVEDAV------------------------------------RVAREVT 232
Query: 330 NQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGG 389
+ P++VYPNSGE +D WI G +VGG
Sbjct: 233 GK-------------PVIVYPNSGESWDGERRTWIGEGRWSADLAARW--AAAGARIVGG 277
Query: 390 CCRTYAEDTLHMKHRL 405
CCR +D + L
Sbjct: 278 CCRVGPDDIAALSSTL 293
>gi|148544269|ref|YP_001271639.1| homocysteine methyltransferase [Lactobacillus reuteri DSM 20016]
gi|184153648|ref|YP_001841989.1| homocysteine methyltransferase [Lactobacillus reuteri JCM 1112]
gi|227364985|ref|ZP_03849026.1| homocysteine methyltransferase [Lactobacillus reuteri MM2-3]
gi|325681702|ref|ZP_08161222.1| homocysteine S-methyltransferase [Lactobacillus reuteri MM4-1A]
gi|148531303|gb|ABQ83302.1| homocysteine S-methyltransferase [Lactobacillus reuteri DSM 20016]
gi|183224992|dbj|BAG25509.1| homocysteine S-methyltransferase [Lactobacillus reuteri JCM 1112]
gi|227069996|gb|EEI08378.1| homocysteine methyltransferase [Lactobacillus reuteri MM2-3]
gi|324979014|gb|EGC15961.1| homocysteine S-methyltransferase [Lactobacillus reuteri MM4-1A]
Length = 310
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 164/402 (40%), Gaps = 113/402 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
LIDG S+ L D + LW++ LA V + H+++ KAG + +T++YQA++
Sbjct: 13 LIDGAMSTALEQLGADT--NNSLWTASVLANQPALVKKVHQEYFKAGDRLAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ ++ LI+ +V KE ARD
Sbjct: 71 PAFIKN-GYSKQEAHSLIQRAVVLAKE----------------ARD-------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E+ E + + +AG++GPYGA L +GSEY G Y H
Sbjct: 100 -----------EYQQETGIYNY-------------VAGALGPYGAYLANGSEYSGAY--H 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD 244
+S ++HRPR+ ++ G D++AIET P E L++E P ++SFS KD
Sbjct: 134 LSTIEYQQFHRPRLTDILTVGVDVIAIETQPRLDEVLAELDLVKELAPDTLCYVSFSLKD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
H+ +G ART + AVGVNC+ V++ IE + + P++ YPNS
Sbjct: 194 STHLPDGTPLAVAARTVAKYT--NVFAVGVNCIPLEEVTAAIETVHQVTEKPVIAYPNSS 251
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
A+ + P K W YP+
Sbjct: 252 ----------ATYD-----------PTTKTW-------------SYPHG----------- 266
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
R L + Y+ W+ G+ +VGGCC T +D + L
Sbjct: 267 -RRGLVD----YLPQWIAAGLIIVGGCCTTTPQDIAALHEYL 303
>gi|389818800|ref|ZP_10208975.1| homocysteine methyltransferase [Planococcus antarcticus DSM 14505]
gi|388463710|gb|EIM06057.1| homocysteine methyltransferase [Planococcus antarcticus DSM 14505]
Length = 265
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 151/393 (38%), Gaps = 153/393 (38%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L Y ++ D LWS+ L + + + H D+ +AGAD +T SYQA+I
Sbjct: 15 IVDGAMATELENYGCNLND--RLWSAKILMGNPELIKKVHVDYFQAGADCAITASYQATI 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G+ E L + + LI+ SV EA T +S+ P L+A SVGPYGA L
Sbjct: 73 EGYKE-RGLTEEEAIGLIQKSVQIASEARDEFWTELDNQSNRPKP--LVAASVGPYGAFL 129
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRGDY
Sbjct: 130 SDGSEYRGDY-------------------------------------------------S 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + +H+ RI+ LV+AGADILA ETIP EA+
Sbjct: 141 LSEDELIAFHKERIRVLVDAGADILACETIPCLAEAK----------------------- 177
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPNSGE 304
A+G+NC P ++ SL+ ++K++ P++VYPNSGE
Sbjct: 178 -------------------------AIGINCSAPHIIESLMTEVKSQTAKPIIVYPNSGE 212
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W S + + P S +R
Sbjct: 213 EYD---------------------PTSKTWGEGSSENQFTP------STQR--------- 236
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W + G ++GGCCRT ED
Sbjct: 237 --------------WYEAGAQIIGGCCRTTPED 255
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNSGERYD 573
A+G+NC P ++ L+ ++K++ P++VYPNSGE YD
Sbjct: 178 AIGINCSAPHIIESLMTEVKSQTAKPIIVYPNSGEEYD 215
>gi|404416481|ref|ZP_10998301.1| homocysteine methyltransferase [Staphylococcus arlettae CVD059]
gi|403491138|gb|EJY96663.1| homocysteine methyltransferase [Staphylococcus arlettae CVD059]
Length = 301
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 157/403 (38%), Gaps = 118/403 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L +Y ++ LWSS L + Q H DF +AGADI++T++YQAS
Sbjct: 14 ILDGGLATTLESYGCNL--NTSLWSSEILKNDPAKIQQAHADFTQAGADILLTSTYQASY 71
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
AT + I D A D LIA
Sbjct: 72 --------------------------------ATFSAIGLSDDAIDALIA---------- 89
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D V V +AT + +I GS+GPYGA L DGSEY G Y +
Sbjct: 90 --------DAVYQVKQATTEQQ------------VIVGSLGPYGAYLSDGSEYTGTY--N 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA--WLSFSCK 243
+S + ++HR RI +L+ G ETIP+ E Q + + +QK WLS +
Sbjct: 128 ISRSDYVDFHRQRIDSLIAQGVHDFVFETIPSFAEIQAIVTAIIPLYNQKQTFWLSVTVD 187
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
D ++S+G +F + + +P L G+NC +++ I
Sbjct: 188 DAGNLSDGTAFETLRDYLQDYDP-ILPIFGINCSTVTGINNTI----------------- 229
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
R L P + +YPN G YDA + W
Sbjct: 230 ------------------ARGLLSLPQ--------------TIALYPNGGAHYDAESKTW 257
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ + VT W + V ++GGCC+T + + +L+
Sbjct: 258 SSDSNEQAILDCVTSWAQQNVGIIGGCCQTTPQTIERIVAKLN 300
>gi|348026632|ref|YP_004766437.1| homocysteine S-methyltransferase [Megasphaera elsdenii DSM 20460]
gi|341822686|emb|CCC73610.1| homocysteine S-methyltransferase [Megasphaera elsdenii DSM 20460]
Length = 316
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 61/306 (19%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DG + L D+ + LW++ LA + V + H + +AGAD +T SYQ
Sbjct: 13 GILVLDGSMGTALENLGADL--NNKLWTARVLADRPELVKEVHIQYFRAGADAGITCSYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ G ME + + LI +V +A E A + + + +A S GPYG
Sbjct: 71 ASLPGLME-TGYSREQAEALITRAVQVFLDA-RQEWWDAEGKQAGRSWPLCLA-SAGPYG 127
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A L DGSEY+G Y VS T+ ++H
Sbjct: 128 AYLADGSEYKGHY--GVSADTLRDFH---------------------------------- 151
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW--PHQKAWLSF 240
R R + L +AGAD+L ET P+ EA++ ++ E P+ W+SF
Sbjct: 152 -------------RRRAELLWQAGADVLLFETEPSLMEAEVEAQIAEELGAPY---WISF 195
Query: 241 SCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
SC D +H G+ AR P L A+GVNC +P ++SLI +LK ++P++VY
Sbjct: 196 SCCDGRHNCEGQLLADCARQLARNYP-HLQAIGVNCTKPEYIASLIGELKGASDLPIIVY 254
Query: 300 PNSGEH 305
PNSGE
Sbjct: 255 PNSGEE 260
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 115/260 (44%), Gaps = 64/260 (24%)
Query: 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASK 219
L S GPYGA L DGSEY+G Y VS T+ ++HR R + L +AGAD+L ET P+
Sbjct: 118 LCLASAGPYGAYLADGSEYKGHY--GVSADTLRDFHRRRAELLWQAGADVLLFETEPSLM 175
Query: 220 EAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277
EA++ ++ E P+ W+SFSC D +H G+ AR P L A+GVNC
Sbjct: 176 EAEVEAQIAEELGAPY---WISFSCCDGRHNCEGQLLADCARQLARNYP-HLQAIGVNCT 231
Query: 278 RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSF 337
+P ++SLI +LK +
Sbjct: 232 KPEYIASLIGELKGAS-------------------------------------------- 247
Query: 338 SCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
++P++VYPNSGE YD W Y D++ G VGGCC T A+
Sbjct: 248 -----DLPIIVYPNSGEEYDPQTKTWHGVGTDRRFGDYALDYMKAGAVAVGGCCTTVAD- 301
Query: 398 TLHMKHRLDDWVSGLSTYVG 417
H++ V+ TY G
Sbjct: 302 --HIRQV----VAARRTYTG 315
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNS 568
D +H G+ AR P L A+GVNC +P ++ LI +LK ++P++VYPNS
Sbjct: 199 DGRHNCEGQLLADCARQLARNYP-HLQAIGVNCTKPEYIASLIGELKGASDLPIIVYPNS 257
Query: 569 GERYD 573
GE YD
Sbjct: 258 GEEYD 262
>gi|297191400|ref|ZP_06908798.1| homocysteine methyltransferase [Streptomyces pristinaespiralis ATCC
25486]
gi|197722332|gb|EDY66240.1| homocysteine methyltransferase [Streptomyces pristinaespiralis ATCC
25486]
Length = 300
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 156/408 (38%), Gaps = 128/408 (31%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DGG S+QL D+ G LWS+ LA + + H +++AGA +
Sbjct: 14 GIVVLDGGLSNQLQAQGCDLSGG--LWSARLLADDPEQIRAAHTAYVRAGAQV------- 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
LI SS E A T R ++ L+ SVG
Sbjct: 65 -------------------LITSSYQATFEGFARRGT-GRAQAAG-----LLGRSVG--- 96
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
R D ++ +A SVGPYGA L DGSEYRG Y
Sbjct: 97 ------------------------LARSAADAAGHEVWVAASVGPYGAMLADGSEYRGRY 132
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
V E + +HRPRI+AL AG D+LA+ET+P + EAQ L E WLS++
Sbjct: 133 GLGVRE--LERFHRPRIEALAAAGPDVLALETVPDTDEAQALLEAA-EGCGVPLWLSYTV 189
Query: 243 KDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE--NIPLV 297
+ + + E+F A D++IAVGVNC P ++ + L TE P V
Sbjct: 190 AEGRTRAGQPLAEAFALAA------GRDEVIAVGVNCCDPREATAAV-ALATEITGKPAV 242
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE R+D
Sbjct: 243 VYPNSGE--------------------------------------------------RWD 252
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
A ++ W +PV V +W G L GGCCR + + L
Sbjct: 253 AASSSWQGGSGYDPV--RVREWRAAGARLAGGCCRVGPREIAELARLL 298
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPNSGERYD 573
D++IAVGVNC P + + L TE P VVYPNSGER+D
Sbjct: 211 DEVIAVGVNCCDPREATAAV-ALATEITGKPAVVYPNSGERWD 252
>gi|335356513|ref|ZP_08548383.1| homocysteine methyltransferase [Lactobacillus animalis KCTC 3501]
Length = 309
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 165/394 (41%), Gaps = 115/394 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N+ ++DG ++ L I LW++ L+ +AV H ++ AGA +++T++YQ
Sbjct: 8 NIHVLDGSMAAALKE--QGIDSTGELWTAQALSDNIEAVYDAHYSYLAAGAQMILTDTYQ 65
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A++ F + A H++ ++++ G
Sbjct: 66 ANLQAFEK---------------------------AGHSKQQAENLV------------G 86
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
++ + R DY E + L+A S+GPYGA L DGSEYRGDY
Sbjct: 87 MAVLVAQKARDDYEEQT----------------GKHALVAASIGPYGAYLADGSEYRGDY 130
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL-REWPHQKAWLSFS 241
+ +++A +H PR+ A++ D LA+ET P E L R L + P ++SF+
Sbjct: 131 L--LNDAQYLNFHLPRLTAVLAQAPDCLALETQPKLSEPLALLRWLEKNVPQMPVYVSFT 188
Query: 242 CKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVY 299
+D+ +S+G T++ R ++ +Q+ A+GVNC+ P +VS ++ ++ L+VY
Sbjct: 189 LRDEMTLSDG---TELKRAVAAISKFEQVFAIGVNCIVPELVSGALKVMRQATTKKLIVY 245
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PN L + P +K W + L F+ TE
Sbjct: 246 PN-----LGAQYDPETK----------TWAKSEQQLDFTQLTEK---------------- 274
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
W G +++GGCC T
Sbjct: 275 -------------------WYQAGASIIGGCCMT 289
>gi|58337299|ref|YP_193884.1| homocysteine methyltransferase [Lactobacillus acidophilus NCFM]
gi|227903885|ref|ZP_04021690.1| homocysteine methyltransferase [Lactobacillus acidophilus ATCC
4796]
gi|58254616|gb|AAV42853.1| homocysteine S-methyltransferase [Lactobacillus acidophilus NCFM]
gi|227868276|gb|EEJ75697.1| homocysteine methyltransferase [Lactobacillus acidophilus ATCC
4796]
Length = 310
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 154/389 (39%), Gaps = 111/389 (28%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L + + LW++ L D V + H ++ K+GA + +TN+YQA++
Sbjct: 13 ILDGAMSTALEK--QGVNTNNDLWTAVALENDLDKVYKVHMNYFKSGAQMTITNTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + D + + +LI +V K+A
Sbjct: 71 QAFKKHGYSD-EHTKKLITDAVQIAKKA-------------------------------- 97
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY + W +A SVGPYGA L DG E+RGDY
Sbjct: 98 ------RDDYQTQTGKH---NW-------------VAASVGPYGAYLSDGDEFRGDY--S 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ +H PR++ L+E D LAIET P E + L+E+ +Q +++F+ D
Sbjct: 134 LTPKEYLAFHLPRLKILLENKPDCLAIETQPKLDEVIAILDWLKEYANQIPVYVTFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
IS+G +V + +Q+ AVG NC +P + ++ I++++
Sbjct: 194 TTKISDGTPLKKVMQKLNEY--EQVFAVGANCFKPFLATTAIDRMRM------------- 238
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
F+ KT ++VYPN G YD WI
Sbjct: 239 --------------------------------FTQKT----IIVYPNLGGVYDEFERNWI 262
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ K +W G ++GGCC T
Sbjct: 263 PFNADLDFTKLSKEWYKHGAHIIGGCCST 291
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLI 536
+ DWL E Y TLH D IS+G +V + +Q+
Sbjct: 172 ILDWLKE----YANQIPVYVTFTLH--------DTTKISDGTPLKKVMQKLNEY--EQVF 217
Query: 537 AVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
AVG NC +P + + I++++ ++VYPN G YD
Sbjct: 218 AVGANCFKPFLATTAIDRMRMFTQKTIIVYPNLGGVYD 255
>gi|161507552|ref|YP_001577506.1| homocysteine methyltransferase [Lactobacillus helveticus DPC 4571]
gi|160348541|gb|ABX27215.1| Homocysteine S-methyltransferase [Lactobacillus helveticus DPC
4571]
Length = 331
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 161/393 (40%), Gaps = 119/393 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S +L + + LW++ L D + Q H D+ AGA++V+T++YQA++
Sbjct: 43 VLDGAMSDELER--QGVKTNNKLWTATALINELDKIYQAHWDYFTAGAELVITDTYQANV 100
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + A ++ ++ RD ++
Sbjct: 101 QAFTQ---------------------------AGYSEQEAEKFIRD------------AV 121
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ + R DY + + +AG+VG Y A L DG+EYRGDY
Sbjct: 122 KVAKKARDDYEQKTGKHNY----------------VAGTVGSYSAYLADGNEYRGDY--E 163
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE----WPHQKAWLSFS 241
+SE +H PR++ ++ D++A+ET P E + L+E +P ++SF+
Sbjct: 164 LSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKENASDYP---VYVSFT 220
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
KD HIS+G + Q +Q+ A+G+NC+ P +V+ ++++ K PLV+YP
Sbjct: 221 LKDATHISDGTTLEQAVSAVDKF--EQVFAIGINCISPDLVAPALKEIGKYTFKPLVLYP 278
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N G AS + P K W F E++D
Sbjct: 279 NLG----------ASYD-----------PKIKQWREFK---------------EKFD--- 299
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+K W EG L+GGCC T
Sbjct: 300 -----------FNKLTKKWYQEGARLIGGCCTT 321
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE +A++ ++ +++ L D HIS+G + Q +Q+ A+G+
Sbjct: 196 LDEPLAVLNWLKENASDYPVYVSFTLKD--ATHISDGTTLEQAVSAVDKF--EQVFAIGI 251
Query: 541 NCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
NC+ P +V+P ++++ K PLV+YPN G YD
Sbjct: 252 NCISPDLVAPALKEIGKYTFKPLVLYPNLGASYD 285
>gi|348171479|ref|ZP_08878373.1| homocysteine methyltransferase [Saccharopolyspora spinosa NRRL
18395]
Length = 299
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 164/408 (40%), Gaps = 129/408 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D LWS+ LA A + +V H F +AGA+I T S
Sbjct: 12 ILDGGLATELEAQGHDLSDA--LWSARLLADAPEEIVAAHAAFFRAGAEIATTAS----- 64
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIA-LEATHARIRSDDPARDILIAGSVGPYGAS 124
Y +S++ + + I EA RS + AR +AG V
Sbjct: 65 ----------YQASFE------GFAERGIERAEAAKLMRRSVELAR---LAGEV------ 99
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVE 184
+P R +A S+GPYGA L DGSEYRG Y
Sbjct: 100 -----------------------------EPGRHRWVAASIGPYGAMLADGSEYRGRY-- 128
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+++ + ++HRPR++ L E+ DI A+ET+P EA+ L + + AWLSF+
Sbjct: 129 GLTKRELHDFHRPRLEVLAESRPDIFALETVPDIDEAEALVDAVADL-DVPAWLSFTISG 187
Query: 245 DKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYP 300
++ + E+F A + D +IAVGVNC P V + IE T P+VVYP
Sbjct: 188 EQTRAGQPLAEAFAVAA------DSDAIIAVGVNCSAPDDVLTAIEIASATVEKPIVVYP 241
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAV 359
NSGE W Q +AW + R A
Sbjct: 242 NSGEG----------------------WDAQRRAWTGRA----------------RLSAE 263
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
AR W G ++GGCCR ED + L D
Sbjct: 264 QAR---------------SWRAAGAHVIGGCCRVRPEDITAVADALTD 296
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+ D +IAVGVNC P V IE T P+VVYPNSGE +D
Sbjct: 205 DSDAIIAVGVNCSAPDDVLTAIEIASATVEKPIVVYPNSGEGWD 248
>gi|68488439|ref|XP_711903.1| hypothetical protein CaO19.8016 [Candida albicans SC5314]
gi|68488498|ref|XP_711874.1| hypothetical protein CaO19.386 [Candida albicans SC5314]
gi|46433218|gb|EAK92666.1| hypothetical protein CaO19.386 [Candida albicans SC5314]
gi|46433248|gb|EAK92695.1| hypothetical protein CaO19.8016 [Candida albicans SC5314]
Length = 311
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 80/342 (23%)
Query: 6 LIDGGFSSQL-------STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+IDG ++L STY+ G PLWS L + V Q H D+I GAD+++T
Sbjct: 14 VIDGALGTELERLLPTTSTYLPS---GSPLWSGQVLIKNPELVEQVHLDYINVGADMIIT 70
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
++YQ S Y S ++ I +D +AIAL + + + +
Sbjct: 71 STYQTS-----------YASLHKYIGYDMD---QAIALWNSALNVAKNAVKK-------- 108
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
S RD D++IAGS+GPY L +GSEY
Sbjct: 109 -----SGRD------------------------------DVIIAGSIGPYATLLANGSEY 133
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
GDY + V++ + E+H P + + DI+ IETIP+ +E +++ L +++ ++ ++
Sbjct: 134 NGDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFI 192
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
S + + +S+G S +VA+ +N + +AVG+NC V + L + PL +
Sbjct: 193 SINPQTGSALSDGTSLIEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--DFPLFI 250
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLRE--WPNQKA-WLSF 337
YPN G + + + + ++L+E W A WL+F
Sbjct: 251 YPNLG-------FVYDTTVHKFVSKVLQESTWSKSVAKWLAF 285
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 410 SGLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRD--FIKGS----------------- 449
+ L Y+G D+ LW+S L AK+AV ++ RD I GS
Sbjct: 78 ASLHKYIGYDMDQAIALWNSA-LNVAKNAVKKSGRDDVIIAGSIGPYATLLANGSEYNGD 136
Query: 450 ---QTNDFLRDYNSP------NLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTL 500
T++ L +Y++P N +D E + + + + ++ G + Y
Sbjct: 137 YQGVTDEELIEYHTPLFEFYENSDVDIICIETIPSF------QELKVIIGLAKKYTSKEF 190
Query: 501 HMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI 560
+ ++ +S+G S +VA+ +N + +AVG+NC V + L +
Sbjct: 191 FIS--INPQTGSALSDGTSLIEVAQLFAEINDPRFVAVGINCTSYENVDQISTYLT--DF 246
Query: 561 PLVVYPNSGERYD 573
PL +YPN G YD
Sbjct: 247 PLFIYPNLGFVYD 259
>gi|329940276|ref|ZP_08289558.1| homocysteine methyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329301102|gb|EGG44998.1| homocysteine methyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 308
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 136/304 (44%), Gaps = 63/304 (20%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL D+ G LWS+ LA A +AVV+ H + +AGA++ +T SY
Sbjct: 15 AGTLVLDGGLSNQLEAAGHDL--GDALWSARLLAEAPEAVVEAHLAYFEAGANVAITASY 72
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + L + +L+ SV+ +EA R + A S GPY
Sbjct: 73 QATFEGFARY-GLTRARTAELLAYSVESAREAARRARERGVA------RPLWTAASAGPY 125
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E +A++H
Sbjct: 126 GAMLADGSEYRGRYGLSVDE--LADFH--------------------------------- 150
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
RPR++AL A D+LA+ET+P ++EA+ L R +R AWLS++
Sbjct: 151 --------------RPRLEALAAARPDVLALETVPDTEEARALLRAVRGL-GVPAWLSYT 195
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYP 300
+ + A +++AVGVNC P V + + P+V YP
Sbjct: 196 VAGSRTRAGQPLEEAFALAAEAE---EIVAVGVNCCAPKDVEPAVALAAQVTGKPVVAYP 252
Query: 301 NSGE 304
NSGE
Sbjct: 253 NSGE 256
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 48/132 (36%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ET+P ++EA+ L R +R AWLS++
Sbjct: 164 VLALETVPDTEEARALLRAVRGL-GVPAWLSYTVAGSRTRAGQPLEEAFALAAEAEEIVA 222
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C +++ P+V YPNSGE + A A W P + V +W
Sbjct: 223 VGVNCCAPKDVEPAVALAAQVTGKPVVAYPNSGETWHADTAGWTGPVTFTP--EAVRNWR 280
Query: 381 DEGVALVGGCCR 392
G L+GGCCR
Sbjct: 281 RAGARLIGGCCR 292
>gi|114328640|ref|YP_745797.1| homocysteine methyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|114316814|gb|ABI62874.1| homocysteine S-methyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 313
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 133/305 (43%), Gaps = 59/305 (19%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DG +++L + D PLWS L A+ HR +++AGAD + T
Sbjct: 12 ARPLLLDGALATELERAGYHLDD--PLWSGRLLLDNPAAIAAVHRAYLEAGADCIET--- 66
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
+SYQL +L R S A +L +
Sbjct: 67 ----------------ASYQL------------SLPGLQRRGLSRGRAMSVLADAA---- 94
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
R R D + A R L+AGS+GPYGA DGSEY G
Sbjct: 95 ----RLACSVRDDVWAGLPAAQRRNRIR---------PLVAGSLGPYGACQADGSEYTGR 141
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y +S + +H PR++AL GAD++A ET+P EA LL+ W+SFS
Sbjct: 142 YA--LSRSQYLAFHAPRMRALAAGGADLIACETVPHLDEALAFADLLQAL-SVPGWVSFS 198
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQ--LIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
+D HI++G R C + A+G+NC P++V +LI L+ +P++VY
Sbjct: 199 VRDAAHIADGTPL----RLCVQAMASCPFVAAIGINCTDPVLVPALIRCLRRGGLPVIVY 254
Query: 300 PNSGE 304
PN+GE
Sbjct: 255 PNAGE 259
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQ--LIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPN 567
D HI++G R C + A+G+NC P++V LI L+ +P++VYPN
Sbjct: 201 DAAHIADGTPL----RLCVQAMASCPFVAAIGINCTDPVLVPALIRCLRRGGLPVIVYPN 256
Query: 568 SGERYDF 574
+GE +D
Sbjct: 257 AGEPFDL 263
>gi|326333481|ref|ZP_08199723.1| homocysteine S-methyltransferase [Nocardioidaceae bacterium
Broad-1]
gi|325948726|gb|EGD40824.1| homocysteine S-methyltransferase [Nocardioidaceae bacterium
Broad-1]
Length = 287
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 130/301 (43%), Gaps = 68/301 (22%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DGG S+ L D+ LW++ L + + HR + AGAD+ T SYQA
Sbjct: 2 VTILDGGLSNALEARGHDVSGA--LWTARLLDESPAEIAAVHRAYYAAGADVATTASYQA 59
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S+ G F++ +Y AT RS AR++ G
Sbjct: 60 SVPG---FVEAGMTETY-----------------ATELLRRSVRIAREVAAEG------- 92
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
P R L+A SVGPYGA L DGSEYRG Y
Sbjct: 93 -------------------------------PGR--LVAASVGPYGAYLADGSEYRGRY- 118
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
VS AT+ ++H PR+ L D++A+ETIP +EA++L LL + W S+SC
Sbjct: 119 -GVSAATLRDFHAPRLALLETEDPDLIAVETIPDIEEAEVLVDLLDDI-GLPVWFSYSCA 176
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+ G+ + ++AVGVNC P V + ++ P VVYPN+G
Sbjct: 177 GTR-TRAGQPLADALALAAGIR--SVVAVGVNCCDPADVPAAVQLATATGEPAVVYPNTG 233
Query: 304 E 304
E
Sbjct: 234 E 234
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 49/131 (37%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI--------------------- 344
++A+ETIP +EA++L LL + W S+SC
Sbjct: 143 LIAVETIPDIEEAEVLVDLLDDI-GLPVWFSYSCAGTRTRAGQPLADALALAAGIRSVVA 201
Query: 345 -----------------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLD 381
P VVYPN+GE Y + W P + W+
Sbjct: 202 VGVNCCDPADVPAAVQLATATGEPAVVYPNTGETY--ADGAWTGTPHFRPGEAL--SWVS 257
Query: 382 EGVALVGGCCR 392
G A VGGCCR
Sbjct: 258 SGAAYVGGCCR 268
>gi|300812709|ref|ZP_07093117.1| putative Homocysteine S-methyltransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496297|gb|EFK31411.1| putative Homocysteine S-methyltransferase [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
Length = 310
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 131/298 (43%), Gaps = 62/298 (20%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+
Sbjct: 15 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITD------- 65
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
SYQ S ++K ++ +A A IR S
Sbjct: 66 ------------SYQ--ASLPAFMKHGLSEDAARALIRE------------------SAA 93
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
+ R D+ + H + AGSVGPYGA L DGSEYRGDY +
Sbjct: 94 VAIKARDDFEKATG------IHNFV----------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIKELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ASISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPASISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|385815065|ref|YP_005851456.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125102|gb|ADY84432.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 305
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 131/298 (43%), Gaps = 62/298 (20%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+
Sbjct: 15 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITD------- 65
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
SYQ S ++K ++ +A A IR S
Sbjct: 66 ------------SYQ--ASLPAFMKHGLSEDAARALIRE------------------SAA 93
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
+ R D+ + H + AGSVGPYGA L DGSEYRGDY +
Sbjct: 94 VAIKARDDFEKATG------IHNFV----------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|116513465|ref|YP_812371.1| homocysteine methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|418029312|ref|ZP_12667856.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|116092780|gb|ABJ57933.1| homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|354690160|gb|EHE90113.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 310
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 131/298 (43%), Gaps = 62/298 (20%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DG S+ L + D LW++ LA D V + H+++ KAGA + +T+
Sbjct: 15 LDGSMSTPLEAWGEDT--NSDLWTAKALADNPDLVYRVHQEYFKAGARVTITD------- 65
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
SYQ S ++K ++ +A A IR S
Sbjct: 66 ------------SYQ--ASLPAFMKHGLSEDAARALIRE------------------SAA 93
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
+ R D+ + H + AGSVGPYGA L DGSEYRGDY +
Sbjct: 94 VAIKARDDFEKATG------IHNFV----------AGSVGPYGAYLADGSEYRGDYA--L 135
Query: 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKDD 245
S ++H PRI+ LV G D LA+ET P E + + L+ ++P ++SFS KD
Sbjct: 136 SHEEYVDFHAPRIEELVAGGVDCLAVETQPKLSEVRAILDYLKAKYPDLPVYVSFSLKDP 195
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 196 ATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D IS G T+ Q+ A G NC + +++ L+ +P+VVYPNSG
Sbjct: 194 DPATISEGLPLTEAVEEVSAYA--QVFAAGANCFKLAWTVDVVKNLRASKLPIVVYPNSG 251
Query: 570 ERYD 573
YD
Sbjct: 252 AEYD 255
>gi|84494560|ref|ZP_00993679.1| homocysteine methyltransferase [Janibacter sp. HTCC2649]
gi|84384053|gb|EAP99933.1| homocysteine methyltransferase [Janibacter sp. HTCC2649]
Length = 305
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 135/299 (45%), Gaps = 72/299 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGFS+ L G + G LWS+ L A VV HR F+ AGA+IV++
Sbjct: 24 VLDGGFSTALEAR-GHDLSGR-LWSARLLRQAPSEVVAAHRTFVDAGAEIVIS------- 74
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+SYQ S YV + E A + + I +A
Sbjct: 75 ------------ASYQ--ASHAGYVAAGLTEEECDADLDAS-----IELA---------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R G++ R L+A SVGPYGA L DGSEY G
Sbjct: 106 RQGADGRA--------------------------LVAASVGPYGAHLADGSEYTG--YPA 137
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
VS AT+ E+H R++ L+ AG D++A+ETIP EA+++ LL E P W+SFS
Sbjct: 138 VSRATLREFHSRRLERLIAAGPDLVAVETIPEVAEAEVVVELLTEIAPDLPYWVSFSATG 197
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
++ G F + + IAVGVNC P + L+E N+P V+YPN+G
Sbjct: 198 GGRLTGGAPFAE----AIGVVRGAAIAVGVNCTAPRHIDELLEA-GGPNVPYVIYPNAG 251
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 536 IAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
IAVGVNC P + L+E N+P V+YPN+G YD
Sbjct: 219 IAVGVNCTAPRHIDELLEA-GGPNVPYVIYPNAGATYD 255
>gi|260101552|ref|ZP_05751789.1| homocysteine S-methyltransferase [Lactobacillus helveticus DSM
20075]
gi|260084630|gb|EEW68750.1| homocysteine S-methyltransferase [Lactobacillus helveticus DSM
20075]
Length = 337
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 158/393 (40%), Gaps = 119/393 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S +L + + LW++ L D V Q H D+ AGA++V+T++YQA++
Sbjct: 43 VLDGAMSDKLER--QGVKTNNKLWTATALINELDKVYQAHWDYFTAGAELVITDTYQANV 100
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + + + I+ +V K+A
Sbjct: 101 QAFTQ-AGYSEQEAEKFIRDAVKVAKKA-------------------------------- 127
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R DY + + +AG+VG YGA L DG+EYRGDY
Sbjct: 128 ------RDDYEQKTGKHNY----------------VAGTVGSYGAYLADGNEYRGDY--E 163
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE----WPHQKAWLSFS 241
+SE +H PR++ ++ D++A+ET P E + L+E +P ++SF+
Sbjct: 164 LSELEYLAFHLPRLRQILAEKPDLIALETQPKLDEPLAVLNWLKENASDYP---VYVSFT 220
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
KD HIS+G + Q +Q+ A+G+NC+ P +V+ +++ K LVVYP
Sbjct: 221 LKDATHISDGTTLEQAVSAVDKF--EQVFAIGINCISPDLVAPASKEIGKYTFKSLVVYP 278
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N G AS + P K W F E++D
Sbjct: 279 NLG----------ASYD-----------PKIKQWREFK---------------EKFD--- 299
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
++ W EG L+GGCC T
Sbjct: 300 -----------FNRLTKKWYQEGARLIGGCCTT 321
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 481 LDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGV 540
LDE +A++ ++ +++ L D HIS+G + Q +Q+ A+G+
Sbjct: 196 LDEPLAVLNWLKENASDYPVYVSFTLKD--ATHISDGTTLEQAVSAVDKF--EQVFAIGI 251
Query: 541 NCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
NC+ P +V+P +++ K LVVYPN G YD
Sbjct: 252 NCISPDLVAPASKEIGKYTFKSLVVYPNLGASYD 285
>gi|225719574|gb|ACO15633.1| Homocysteine S-methyltransferase 1 [Caligus clemensi]
Length = 391
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 91/321 (28%)
Query: 4 VKLIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFI-KAGADIVMTNSY 61
+ ++DGGFS+Q+ + G D +G P W+S +AV ++H D++ D++ +N+
Sbjct: 19 IFILDGGFSTQIQQHAGKDSFEGRPQWTSELNTENPEAVKRSHMDYLSNCSGDLISSNT- 77
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Y ++ I+ +V+ EAI LEA+
Sbjct: 78 --------------YQAASSSIEKAVELCDEAI-LEAS---------------------- 100
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR-- 179
HV R I GS+GPY A GSEY
Sbjct: 101 ----------------HV----------------PRKAGIVGSLGPYAAFQPSGSEYNSS 128
Query: 180 -GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
G +++ + EW++ RI+ L+ AG D++A ET+P KEA + ++ + K W+
Sbjct: 129 DGMSYPPLADEELKEWYKDRIRHLMIAGVDVIAFETMPCIKEALVALDIIDNVINAKCWI 188
Query: 239 SFSCKDDKHISNGESFTQVARTCYN---MNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-- 293
SF C+D KH++ GESF N +L+ +G+NC P +SSL++ + N
Sbjct: 189 SFQCRDGKHLAYGESFKDAVERLLNHPAFVKRKLLYIGINCTSPKYISSLLKLAERVNKK 248
Query: 294 -----------IPLVVYPNSG 303
IP VVYPN G
Sbjct: 249 MNFPDKYGYWRIPYVVYPNRG 269
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 510 DDKHISNGESFTQVARTCYN---MNPDQLIAVGVNCVRPLMVSPLIEQLKTEN------- 559
D KH++ GESF N +L+ +G+NC P +S L++ + N
Sbjct: 194 DGKHLAYGESFKDAVERLLNHPAFVKRKLLYIGINCTSPKYISSLLKLAERVNKKMNFPD 253
Query: 560 ------IPLVVYPNSG 569
IP VVYPN G
Sbjct: 254 KYGYWRIPYVVYPNRG 269
>gi|389864903|ref|YP_006367144.1| Homocysteine S-methyltransferase 4 [Modestobacter marinus]
gi|388487107|emb|CCH88664.1| Homocysteine S-methyltransferase 4 [Modestobacter marinus]
Length = 297
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 114/267 (42%), Gaps = 62/267 (23%)
Query: 136 VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWH 195
++ AT+ + + A D +A SVGPYGA L DGSEY G YV + A + +H
Sbjct: 79 IDETEAATLMTRSVQLAREGAPDGWVAASVGPYGAYLADGSEYTGGYVSDLGVADLRAFH 138
Query: 196 RPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC-KDDKHIS---NG 251
RPR+Q L EAGAD+LA ET+PA+ E + L L AWLS + DD + G
Sbjct: 139 RPRLQVLAEAGADVLACETLPAAAEVEALLGELAGL-DVPAWLSLTAVVDDAGVPRTRRG 197
Query: 252 ESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPNSGEHILAIE 310
E VA ++ D +IAVGVNC P + +++ P V YPNSGE
Sbjct: 198 ERLADVAAMARDV--DAVIAVGVNCTDPGAVPAAVAVATTASGKPGVAYPNSGE------ 249
Query: 311 TIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCE 370
R+DA RW +
Sbjct: 250 --------------------------------------------RWDATARRWTG----Q 261
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAED 397
P V+ WL G LVGGCCR +D
Sbjct: 262 PGVGDVSGWLAAGARLVGGCCRVRPDD 288
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 500 LHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSPLIEQLKTE 558
L + +DD GE VA ++ D +IAVGVNC P + + +
Sbjct: 180 LSLTAVVDDAGVPRTRRGERLADVAAMARDV--DAVIAVGVNCTDPGAVPAAVAVATTAS 237
Query: 559 NIPLVVYPNSGERYD 573
P V YPNSGER+D
Sbjct: 238 GKPGVAYPNSGERWD 252
>gi|302523430|ref|ZP_07275772.1| homocysteine methyltransferase [Streptomyces sp. SPB78]
gi|302432325|gb|EFL04141.1| homocysteine methyltransferase [Streptomyces sp. SPB78]
Length = 304
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 136/305 (44%), Gaps = 81/305 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++L + D LWS+ L A+ + HR + +AGA++ T SYQAS
Sbjct: 24 VLDGGLSNELEAAGHGLAD--ALWSARLLRDEPAALTEAHRAYAEAGAEVATTASYQASF 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVK--EAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF + +D + E +AL T AR
Sbjct: 82 EGFA--------------RHGIDAARTRELLALSVTAAR--------------------- 106
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
A + W +A SVGPYGA L DGSEYRG Y
Sbjct: 107 ------------------AAGSRW-------------VAASVGPYGAMLADGSEYRGRY- 134
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V A + +H PR++AL+ AG D+LA+ET+P ++EA+ L ++R WLS+S
Sbjct: 135 -GVGRAALERFHGPRVEALLAAGPDVLALETVPDAEEARALLAVVRGC-GVPVWLSYSVA 192
Query: 244 DDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIEQ-LKTENIPLVVYP 300
D + + Q + + ++++AVGVNC PL V+ + + + P V YP
Sbjct: 193 DGRTWAG-----QPLDAAFGLAAEAEEVVAVGVNCCEPLEVADAVRRAVAVSGKPGVAYP 247
Query: 301 NSGEH 305
NSGE
Sbjct: 248 NSGER 252
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 48/137 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------------- 338
+G +LA+ET+P ++EA+ L ++R WLS+S
Sbjct: 155 AGPDVLALETVPDAEEARALLAVVRGC-GVPVWLSYSVADGRTWAGQPLDAAFGLAAEAE 213
Query: 339 ---------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
C+ + P V YPNSGER+DA W R V +
Sbjct: 214 EVVAVGVNCCEPLEVADAVRRAVAVSGKPGVAYPNSGERWDAHARGW--RSDPSFVPELA 271
Query: 377 TDWLDEGVALVGGCCRT 393
W G LVGGCCR
Sbjct: 272 ARWYAAGARLVGGCCRV 288
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 539 GVNCVRPLMVSPLIEQ-LKTENIPLVVYPNSGERYDFH 575
GVNC PL V+ + + + P V YPNSGER+D H
Sbjct: 219 GVNCCEPLEVADAVRRAVAVSGKPGVAYPNSGERWDAH 256
>gi|241641504|ref|XP_002410979.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ixodes scapularis]
gi|215503657|gb|EEC13151.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
[Ixodes scapularis]
Length = 185
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 6/170 (3%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
AGSVG YGA DGSEY G Y + +S + +WHR R+Q LV G D+LA ETIPA +E
Sbjct: 7 FAGSVGSYGAYPYDGSEYTGSYADTMSVKELCDWHRFRVQHLVRLGCDLLAFETIPALQE 66
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRP 279
A L +LLRE P K WLSF C+D+K + GE + + + Q+ A+ VNC RP
Sbjct: 67 ALALLQLLREHPGTKGWLSFGCQDEKLTAKGECLQKAIQAVLGKDSGSQICAIRVNCCRP 126
Query: 280 LMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREW 328
MV L++ + E PLV Y ++ + + +P K++ L + EW
Sbjct: 127 DMVGLLLKDARKEGQPPLVAYADA--EVASWTLVP--KDSDQLGNYVAEW 172
>gi|357402230|ref|YP_004914155.1| Homocysteine S-methyltransferase 4 [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|386358303|ref|YP_006056549.1| homocysteine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768639|emb|CCB77352.1| Homocysteine S-methyltransferase 4 [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|365808811|gb|AEW97027.1| homocysteine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 302
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 131/309 (42%), Gaps = 75/309 (24%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
MA ++DGG S+QL+ D+ D LWS+ LA A + + H +++AGA +
Sbjct: 11 MAGPVVLDGGLSNQLADQGCDLSDA--LWSARLLADAPEQIEAAHAAYLRAGARV----- 63
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
LI SS E A R + R + +A
Sbjct: 64 ---------------------LITSSYQATYEGFARRGLERRAAGELLRRSVRLARRA-- 100
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A RD D+ +A SVGPYGA L DGSEYRG
Sbjct: 101 --AGGRD------------------------------DVWVAASVGPYGAMLADGSEYRG 128
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
Y V+E T +HRPRI+ L EA D+LA+ET+P + EA+ L R + E WLS+
Sbjct: 129 RYGLSVAELT--RFHRPRIETLAEAAPDVLALETVPDADEAEALLRAV-EGTGVPVWLSY 185
Query: 241 SCKDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPL 296
+ D+ + ++F A Q+IAVGVNC + + P+
Sbjct: 186 TVAGDRTRAGQPLADAFALAA------GVPQVIAVGVNCCSAEDAGPAVALARQVTGKPV 239
Query: 297 VVYPNSGEH 305
VVYPNSGE
Sbjct: 240 VVYPNSGER 248
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 51/132 (38%), Gaps = 48/132 (36%)
Query: 306 ILAIETIPASKEAQMLCRLLREWPNQKAWLSFS--------------------------- 338
+LA+ET+P + EA+ L R + E WLS++
Sbjct: 155 VLALETVPDADEAEALLRAV-EGTGVPVWLSYTVAGDRTRAGQPLADAFALAAGVPQVIA 213
Query: 339 -----CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
C E+ P+VVYPNSGER+DA W +P V W
Sbjct: 214 VGVNCCSAEDAGPAVALARQVTGKPVVVYPNSGERWDAEARAWRGGATFDP--SRVEGWT 271
Query: 381 DEGVALVGGCCR 392
G L+GGCCR
Sbjct: 272 AAGARLIGGCCR 283
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
Q+IAVGVNC P + + P+VVYPNSGER+D
Sbjct: 210 QVIAVGVNCCSAEDAGPAVALARQVTGKPVVVYPNSGERWD 250
>gi|410867432|ref|YP_006982043.1| homocysteine methyltransferase [Propionibacterium acidipropionici
ATCC 4875]
gi|410824073|gb|AFV90688.1| homocysteine methyltransferase [Propionibacterium acidipropionici
ATCC 4875]
Length = 315
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 161/408 (39%), Gaps = 126/408 (30%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG + L DI LWS+ L + V+ HRDF AGA + T SYQ
Sbjct: 14 GVVVLDGGLGTLLEARGNDITG--QLWSAQILRDRPEEVLAAHRDFFAAGARVATTASYQ 71
Query: 63 ------ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG 116
A+IGG E D +L++ SV+ + A+ D+
Sbjct: 72 VTRQGLAAIGGRPEEAD-------ELLRRSVEVARRAV-----------DE--------- 104
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
A+ R G GD V+ W +A S+GPYGA G+
Sbjct: 105 ------AAARAG----GDGVDR--------W-------------VAASIGPYGAGPGRGT 133
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA 236
EY GDY VSE +A WHRPRI+ L AD+L ETIP+ E + L + L + A
Sbjct: 134 EYDGDYGLTVSE--LAAWHRPRIEVLASTHADVLLAETIPSILEVEALAQELSD-AALPA 190
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC--VRPLMVSSLIEQLKTENI 294
LS + D + + +G ++V R + + AVGVNC + + LI T+
Sbjct: 191 MLSLTVADGR-MRDGTELSEVTRVLAGVR--NIRAVGVNCCGAEDALAAVLILAEGTDR- 246
Query: 295 PLVVYPNSGEHILAIETIPASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSG 353
PL+ YPNSGE + R W P +K L+ PL P
Sbjct: 247 PLIAYPNSGER---------------WNHVARTWEPREKGELT--------PLGAVP--- 280
Query: 354 ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
D L GV +GGCCR + M
Sbjct: 281 ------------------------DLLGAGVRFLGGCCRVTPREIEAM 304
>gi|378823329|ref|ZP_09845984.1| homocysteine S-methyltransferase [Sutterella parvirubra YIT 11816]
gi|378597858|gb|EHY31091.1| homocysteine S-methyltransferase [Sutterella parvirubra YIT 11816]
Length = 318
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 158/402 (39%), Gaps = 119/402 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG S+ L D+ D LW++ L + V + H + +AGAD+ +T SYQA+
Sbjct: 28 IIDGAMSTALEALGADLKD--DLWTAKVLVNEPEIVERVHEAYARAGADVAITCSYQATE 85
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + LD ++++ +I A+ + +A
Sbjct: 86 AGLAK-KGLDSEAAFDVI-------------------------AKSVTLA---------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R+G G D ++AGSVGPYGA L DGSEYRGDY
Sbjct: 110 REGCRRGGR----------------------EDAIVAGSVGPYGAYLADGSEYRGDY--R 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK-- 243
+++A +H R+ AL AG D+ A+ET P E + L R+ W++ + K
Sbjct: 146 LTDAEFEAFHALRMDALKAAGCDLYALETQPQFAEIRALVRMTAA-RGMTCWVTMTHKAG 204
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
D + +G ++VA + D + A+G+NCV + ++ L + P+++YPNS
Sbjct: 205 DPTRLPDGTPLSEVA--AWLDGEDCVEALGLNCVPKATAAQALDALTGATSKPVILYPNS 262
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
GE YDA
Sbjct: 263 GET--------------------------------------------------YDAATKT 272
Query: 363 WIDRDL-CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
W D D V W +GV +GGCCRT ED M+
Sbjct: 273 WSKADPHAHDWDADVVRWKGQGVRCLGGCCRTLPEDVRVMRK 314
>gi|50405455|ref|XP_456363.1| DEHA2A00616p [Debaryomyces hansenii CBS767]
gi|49652027|emb|CAG84308.1| DEHA2A00616p [Debaryomyces hansenii CBS767]
Length = 351
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 68/321 (21%)
Query: 6 LIDGGFSSQLSTYVGDI-------IDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+IDG +QL T + I HPLWS+ L + + + H D++ +GA+I+ T
Sbjct: 15 VIDGALGTQLETKFSKLLQQDNINIQTHPLWSALVLLKNPELIQEVHYDYMCSGANIITT 74
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
++YQAS G +E+ I +DD +
Sbjct: 75 STYQASKRGLLEY----------------------------APGIENDDEVNAV------ 100
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
Y ++ + R Y+E+ M + +T+ ++I I GS+GP+GA L +G+EY
Sbjct: 101 --YDKAIELAVDARSQYLEN-----MGKGMNTLTN---KEIFICGSIGPFGAYLANGAEY 150
Query: 179 RGDYVEHVSEAT-MAEWHRPRI-QALVEAGADILAIETIPASKEAQMLCRLLREW---PH 233
G Y H++E + ++H Q + DI+ ETIP E Q + L+ E +
Sbjct: 151 TGKYGSHITEPQELKKFHYDITSQFISNPKCDIIGFETIPNYSEFQQIVHLMEELLQKTN 210
Query: 234 QKAWLSFSCKDDKHISNGESFTQVA-----RTCYNMN-PDQLIAVGVNCVRPLMVSS--L 285
+ ++S + KD K I +G TQV R N I +G NCV PL +++ L
Sbjct: 211 KPFYISLNFKDPKTICDGTPITQVVDYLNERLSNNEKLRSAFIGLGCNCV-PLEIATNIL 269
Query: 286 IEQLKTENI---PLVVYPNSG 303
+ N+ PL+ YPN+G
Sbjct: 270 LNMSDLNNVHRFPLIAYPNAG 290
>gi|411003103|ref|ZP_11379432.1| homocysteine methyltransferase [Streptomyces globisporus C-1027]
Length = 319
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 156/411 (37%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL + D+ D LWS+ LA A + + H +++AGA +++T SY
Sbjct: 15 AGPVLLDGGLSNQLESQGCDLTDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITASY 72
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QA+ GF + LD + L+ SV+ + A P R+ +A SVGPY
Sbjct: 73 QATFEGFGRY-GLDRSRTEALLARSVELARGAADAARRAG------PGRETWVAASVGPY 125
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E
Sbjct: 126 GAMLADGSEYRGRYGLSVGE---------------------------------------- 145
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE--WPHQKAWLS 239
+ +HRPR+ AL A D LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 146 ---------LERFHRPRVAALAAARPDALALETVPDLDEAEALVRVAEETGLPY---WLS 193
Query: 240 FSCKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIP 295
+S + + E+F A + ++AVGVNC P +E + P
Sbjct: 194 YSVAGGRTRAGQPLEEAFAVAA------GREAVVAVGVNCCDPDETQEAVELAVAVTGRP 247
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 248 AVVYPNSGEG-------------------------------------------------- 257
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W +P V W G LVGGCCR + + RL+
Sbjct: 258 WDAGAREWTGVGTFDP--GRVRAWTRAGARLVGGCCRVGPDLIAELAGRLE 306
>gi|29828653|ref|NP_823287.1| homocysteine methyltransferase [Streptomyces avermitilis MA-4680]
gi|29605757|dbj|BAC69822.1| putative homocysteine S-methyltransferase [Streptomyces avermitilis
MA-4680]
Length = 313
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 63/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL + D+ D LWS+ LA +A+ + H +
Sbjct: 17 VLDGGLSNQLESAGHDLSD--ELWSARLLAERPEAITEAHLAY----------------- 57
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F D+ SSYQ + K I E R+ + L+ SVG
Sbjct: 58 --FEAGADVAITSSYQATFEG--FAKRGIPEE------RAAE-----LLGLSVG------ 96
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R D R + +A SVGPYGA L DGSEYRG Y
Sbjct: 97 ----------------LAREAAVRARADGVTRPLWVAASVGPYGAMLADGSEYRGRYGLT 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V+E + +HRPR++ L AG D+LA+ET+P + EA+ L R +R AWLS+S D
Sbjct: 141 VAE--LEAFHRPRLEVLAAAGPDVLALETVPDADEAEALLRAVRGL-GVPAWLSYSVSGD 197
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
+ G+S + + ++IAVGVNC P V +E + P+VVYPNSGE
Sbjct: 198 R-TRAGQSLEEAFAPAAEAD--EVIAVGVNCCAPEDVDGAVETAARVTGKPVVVYPNSGE 254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 48/142 (33%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V +G +LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 152 LEVLAAAGPDVLALETVPDADEAEALLRAVRGL-GVPAWLSYSVSGDRTRAGQSLEEAFA 210
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCE 370
C E++ P+VVYPNSGE +DA W R
Sbjct: 211 PAAEADEVIAVGVNCCAPEDVDGAVETAARVTGKPVVVYPNSGETWDAGARAWSGRSTF- 269
Query: 371 PVDKYVTDWLDEGVALVGGCCR 392
+ VT W G L+GGCCR
Sbjct: 270 -TAEQVTGWRRAGARLIGGCCR 290
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+IAVGVNC P V +E + P+VVYPNSGE +D
Sbjct: 218 VIAVGVNCCAPEDVDGAVETAARVTGKPVVVYPNSGETWD 257
>gi|333990089|ref|YP_004522703.1| homocysteine methyltransferase [Mycobacterium sp. JDM601]
gi|333486057|gb|AEF35449.1| homocysteine methyltransferase [Mycobacterium sp. JDM601]
Length = 312
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 140/307 (45%), Gaps = 73/307 (23%)
Query: 3 NVKLIDGGFSSQLST----YVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
V + DGG +++L GD+ D PLWS+ L A D V H F AGA I T
Sbjct: 12 TVIVADGGLATELEARGFDLSGDLSD--PLWSARLLLDAPDDVAAVHAAFFAAGAAIATT 69
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
SYQAS GF +D ++ +L++ RS D AR +AG
Sbjct: 70 ASYQASFDGFAA-RGIDRRTAERLLR-------------------RSVDLAR---LAGG- 105
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
A HR +A SVGPYGA+ DGSEY
Sbjct: 106 -------------------------GARGHR-----------VAASVGPYGAARADGSEY 129
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
G Y VSE T WHRPR++ L +AGAD+LA+ET+P EA+ L RL+ E AWL
Sbjct: 130 VGRYGLSVSELTA--WHRPRLEVLADAGADVLALETVPDVDEAEALMRLVSE-AGVPAWL 186
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLV 297
S++ + G+ T + Q++AVGVNC P V IE + P++
Sbjct: 187 SYTI-EGTSTRAGQPLTDAFAVAAGVP--QIVAVGVNCCAPDDVLPAIEIAREITGKPVI 243
Query: 298 VYPNSGE 304
VYPNSGE
Sbjct: 244 VYPNSGE 250
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 50/147 (34%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V ++G +LA+ET+P EA+ L RL+ E AWLS++
Sbjct: 148 LEVLADAGADVLALETVPDVDEAEALMRLVSE-AGVPAWLSYTIEGTSTRAGQPLTDAFA 206
Query: 339 ---------------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCE 370
C +++ P++VYPNSGE +D RW+
Sbjct: 207 VAAGVPQIVAVGVNCCAPDDVLPAIEIAREITGKPVIVYPNSGESWD--GHRWVGPKTFS 264
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAED 397
++ W+ G +VGGCCR D
Sbjct: 265 A--RFAAQWVAAGARIVGGCCRVGPAD 289
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYDFH 575
Q++AVGVNC P V P IE + P++VYPNSGE +D H
Sbjct: 213 QIVAVGVNCCAPDDVLPAIEIAREITGKPVIVYPNSGESWDGH 255
>gi|408789963|ref|ZP_11201597.1| Homocysteine S-methyltransferase [Lactobacillus florum 2F]
gi|408520702|gb|EKK20736.1| Homocysteine S-methyltransferase [Lactobacillus florum 2F]
Length = 305
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 159/403 (39%), Gaps = 123/403 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG ++L + LWS+ L ++ + Q H + +AGAD+ +T++YQA++
Sbjct: 15 VLDGAMGTELEKL--GVATNDELWSANALIDQQEKIYQVHASYFQAGADLAITDTYQANV 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + + + + L+ + V +A R R L+AG +GPYGA L
Sbjct: 73 AAFAKR-GIGHQQALDLLATGVHLA------QAARDRYRPTG-----LVAGCIGPYGAYL 120
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY G+Y + V+E ++H
Sbjct: 121 ADGSEYTGNYTKTVTE--YEQFH------------------------------------- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ----MLCRLLREWPHQKAWLSFS 241
R +I L++AGAD+L+++T+P +E Q +L L + P+ W+S S
Sbjct: 142 ----------REKILTLIDAGADLLSVDTMPNFQEIQAVVGILATLDQPIPY---WISLS 188
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-IPLVVYP 300
++ + +S+G +V + + +G+NC + ++ L++ ++ + +P++VYP
Sbjct: 189 VRNQRQLSDGTDLNRV--VAWLRQQPSVGGIGINCTKMENITPLVKLIRAQTKLPIIVYP 246
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N G + YD +
Sbjct: 247 NPG--------------------------------------------------DLYDPLT 256
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
W + K V WL G ++GGCCRT D +
Sbjct: 257 KTWTTVPHVDSFTKEVPHWLAAGANIIGGCCRTTPADIAQISR 299
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQLKTEN-IPLVVYPNSGERYD 573
+G+NC + ++PL++ ++ + +P++VYPN G+ YD
Sbjct: 216 GIGINCTKMENITPLVKLIRAQTKLPIIVYPNPGDLYD 253
>gi|290971201|ref|XP_002668413.1| predicted protein [Naegleria gruberi]
gi|284081808|gb|EFC35669.1| predicted protein [Naegleria gruberi]
Length = 661
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 56/324 (17%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAG-ADIVMTNSYQ 62
+ ++DGG S+ + T +G ++G LW + +L A+ + H D++ G DI ++SYQ
Sbjct: 333 ILILDGGISTYM-TELGLELNG-SLWGANYLLENPKAIAKVHSDYVHEGLCDICTSSSYQ 390
Query: 63 ASIGGFMEFLDLDYDS--SYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
S G L D+ S + I+ + ++++ + R ++ L+A SV
Sbjct: 391 ISQEG----LAADHVSMKEEERIELASRMFRDSVQIARKVVR------EKEKLVAASVSC 440
Query: 121 YGAS----LRDGSEYRGDYVEHVSEATMAEW-HRLITDDPARDILIAGSVGPYGASLRDG 175
+GAS L + EY GDY++ ++ + H+ + +
Sbjct: 441 FGASISNLLGEAKEYFGDYLDKDVDSNSGHYVHKFV---------------------KQL 479
Query: 176 SEYRGDYVEHVS-EATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLC-----RLLR 229
SE G+ +E E + ++H PR++ L+ A D + +ET+P KE ++LC +L+
Sbjct: 480 SEKLGETLEKSGMEQVIYDFHYPRVRELILAEPDFILLETMPVLKEVEILCDRVIPDILK 539
Query: 230 EWPHQ--KAWLSFSCKDDKHISNGESFTQ----VARTCYNMNPDQLIAVGVNCVRPLMVS 283
E + K +SF CKD H +GES + V + +N + ++ AVG NC+ P +V
Sbjct: 540 ELNKKGIKVMISFYCKDGLHTGHGESIEKCVEYVNQDRFNPSLFEIFAVGANCISPSIVP 599
Query: 284 SLIEQLKT---ENIPLVVYPNSGE 304
LIE + T ++I +++YPNSGE
Sbjct: 600 ILIENIHTHLRKDISIILYPNSGE 623
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 510 DDKHISNGESFTQ----VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT---ENIPL 562
D H +GES + V + +N + ++ AVG NC+ P +V LIE + T ++I +
Sbjct: 556 DGLHTGHGESIEKCVEYVNQDRFNPSLFEIFAVGANCISPSIVPILIENIHTHLRKDISI 615
Query: 563 VVYPNSGERYD 573
++YPNSGE YD
Sbjct: 616 ILYPNSGEIYD 626
>gi|295835182|ref|ZP_06822115.1| homocysteine S-methyltransferase [Streptomyces sp. SPB74]
gi|197697892|gb|EDY44825.1| homocysteine S-methyltransferase [Streptomyces sp. SPB74]
Length = 304
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 132/307 (42%), Gaps = 77/307 (25%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S++L + D LWS+ L A+ HR + AGA++ T SY
Sbjct: 20 ARAVVLDGGLSNELEAAGHGLAD--ALWSARLLRDGPAALTAAHRAYASAGAEVATTASY 77
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QAS F F D++ +E +AL AR
Sbjct: 78 QAS---FEGFARHRIDAAR---------TRELLALSVAAAR------------------- 106
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
A+ + W +A SVGPYGA L DGSEYRG
Sbjct: 107 --------------------ASGSRW-------------VAASVGPYGAMLADGSEYRGR 133
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V A + +H PR++AL+ AG D+LA+ET+P ++EA+ L ++R WLS+S
Sbjct: 134 Y--GVGRAELERFHGPRVEALLAAGPDVLALETVPDTEEARALLAVVRGC-GVPVWLSYS 190
Query: 242 CKDDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPL-MVSSLIEQLKTENIPLVV 298
D + Q + + ++++AVGVNC P + ++ + P V
Sbjct: 191 VADGATRAG-----QPLDAAFGLAAEAEEIVAVGVNCCAPGEVADAVRRAVAAGGKPGVA 245
Query: 299 YPNSGEH 305
YPNSGE
Sbjct: 246 YPNSGER 252
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 48/136 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS-------------------CKTE 342
+G +LA+ET+P ++EA+ L ++R WLS+S + E
Sbjct: 155 AGPDVLALETVPDTEEARALLAVVRGC-GVPVWLSYSVADGATRAGQPLDAAFGLAAEAE 213
Query: 343 NI--------------------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
I P V YPNSGER+DA W R V
Sbjct: 214 EIVAVGVNCCAPGEVADAVRRAVAAGGKPGVAYPNSGERWDAHARGW--RSDPSFVPGLA 271
Query: 377 TDWLDEGVALVGGCCR 392
W G L+GGCCR
Sbjct: 272 ARWYAAGARLIGGCCR 287
>gi|448102884|ref|XP_004199901.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
gi|359381323|emb|CCE81782.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 164/407 (40%), Gaps = 121/407 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHP----LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
++DG ++L + + P LWS+ L V + H ++ +G++I+ T +Y
Sbjct: 15 VLDGALGTELESIIPPTSKSQPKNDPLWSTRVLINDPKLVEEVHYRYLMSGSNIITTCTY 74
Query: 62 QASIGGFMEFLD-LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
QAS+ G +++ D + + L + SVD K A
Sbjct: 75 QASLNGLLKYGDQFSKEDALGLWQKSVDVAKSAA-------------------------- 108
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
R Y EH + +LIAGS+GPYGA L DGSEY G
Sbjct: 109 -----------RRYYKEH---------------SQTQKVLIAGSIGPYGAYLADGSEYTG 142
Query: 181 DYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREWPHQ----- 234
+Y + +E + ++H ++ L+ D++ +ET+P+ +E ++L +L + +
Sbjct: 143 NYGDFSNEH-LEKFHFDLMKFLILNKDVDLIGVETVPSLREFKVLFKLFLKLSEKYNSTK 201
Query: 235 KAWLSFSCKDDKHISNGESFTQV--------ARTCYNMNPDQLIAVGVNCVRPLMVSSLI 286
K + SF+ K++ + +G S +V A+T + ++A+G NCV +V+S++
Sbjct: 202 KIYFSFNFKNEHELCDGSSMEKVFFFLNKHLAKTP--VLAKSVLAIGCNCVDYKLVTSIL 259
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
+Q K N T IP
Sbjct: 260 DQFKYLN-----------------------------------------------TFEIPA 272
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+VYPN G Y+ + + + +WLD V ++GGCC T
Sbjct: 273 IVYPNFGFAYNKDTGNYEAHKDLDNWKRLANEWLDYNVKIIGGCCST 319
>gi|254573984|ref|XP_002494101.1| S-adenosylmethionine-homocysteine methyltransferase [Komagataella
pastoris GS115]
gi|238033900|emb|CAY71922.1| S-adenosylmethionine-homocysteine methyltransferase [Komagataella
pastoris GS115]
Length = 321
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 162/403 (40%), Gaps = 131/403 (32%)
Query: 5 KLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
+++DG ++L DI LWS L + + + Q H +I+AGA++++T +YQ S
Sbjct: 17 RVLDGALGTELEKLGIDI--KSRLWSGKALFYSPETITQIHSSYIQAGAELILTCTYQLS 74
Query: 65 IGGFMEFLDLD----YDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
G + L +D YD + +L K +VD + ++ A+ I GS+G
Sbjct: 75 DQGLKD-LGIDDPDVYDRAVKLAKDAVD-------------QNEGENKAK---IVGSIGS 117
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
YGA L G EY G+Y +S++ + E+HR+
Sbjct: 118 YGAYLSGGEEYTGEY-GAISKSELEEFHRV------------------------------ 146
Query: 181 DYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREWP-----HQ 234
R+Q+L+ D++ ETIP EA+ L L +
Sbjct: 147 -----------------RLQSLLTNPDVDLIGFETIPNILEAETLVVLFNALATSLNVDK 189
Query: 235 KAWLSFSCKDDKH---ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-K 290
++SF+C+++ + I++G S +V+ ++ ++ A+G NC + +E K
Sbjct: 190 GYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCCSISTANGAVELFSK 249
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
N+PL+VYPNSGE
Sbjct: 250 HTNLPLIVYPNSGE---------------------------------------------- 263
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
RYD +W+ + + + V +WL V ++GGCCRT
Sbjct: 264 ----RYDKTEKKWLPGECDQKITDIVVNWLQLNVKIIGGCCRT 302
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERY 572
I++G S +V+ ++ ++ A+G NC + +E K N+PL+VYPNSGERY
Sbjct: 206 IADGTSIPEVSDRLSKLDVSRMYAIGTNCCSISTANGAVELFSKHTNLPLIVYPNSGERY 265
Query: 573 D 573
D
Sbjct: 266 D 266
>gi|328354079|emb|CCA40476.1| homocysteine methyltransferase (EC:2.1.1.10) [Komagataella pastoris
CBS 7435]
Length = 315
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 162/403 (40%), Gaps = 131/403 (32%)
Query: 5 KLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
+++DG ++L DI LWS L + + + Q H +I+AGA++++T +YQ S
Sbjct: 11 RVLDGALGTELEKLGIDI--KSRLWSGKALFYSPETITQIHSSYIQAGAELILTCTYQLS 68
Query: 65 IGGFMEFLDLD----YDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
G + L +D YD + +L K +VD + ++ A+ I GS+G
Sbjct: 69 DQGLKD-LGIDDPDVYDRAVKLAKDAVD-------------QNEGENKAK---IVGSIGS 111
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
YGA L G EY G+Y +S++ + E+HR+
Sbjct: 112 YGAYLSGGEEYTGEY-GAISKSELEEFHRV------------------------------ 140
Query: 181 DYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREWP-----HQ 234
R+Q+L+ D++ ETIP EA+ L L +
Sbjct: 141 -----------------RLQSLLTNPDVDLIGFETIPNILEAETLVVLFNALATSLNVDK 183
Query: 235 KAWLSFSCKDDKH---ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-K 290
++SF+C+++ + I++G S +V+ ++ ++ A+G NC + +E K
Sbjct: 184 GYYMSFNCREESNQSVIADGTSIPEVSDRLSKLDVSRMYAIGTNCCSISTANGAVELFSK 243
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
N+PL+VYPNSGE
Sbjct: 244 HTNLPLIVYPNSGE---------------------------------------------- 257
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
RYD +W+ + + + V +WL V ++GGCCRT
Sbjct: 258 ----RYDKTEKKWLPGECDQKITDIVVNWLQLNVKIIGGCCRT 296
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 514 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERY 572
I++G S +V+ ++ ++ A+G NC + +E K N+PL+VYPNSGERY
Sbjct: 200 IADGTSIPEVSDRLSKLDVSRMYAIGTNCCSISTANGAVELFSKHTNLPLIVYPNSGERY 259
Query: 573 D 573
D
Sbjct: 260 D 260
>gi|344230262|gb|EGV62147.1| Homocysteine S-methyltransferase [Candida tenuis ATCC 10573]
Length = 296
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 129/299 (43%), Gaps = 70/299 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +L I G PLW+ + + + D V Q H +I+AG DIV T +YQ S
Sbjct: 3 VLDGALGIELDKLTP--IRGTPLWAGHAVEESPDIVRQVHSRYIQAGCDIVSTATYQMSY 60
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+ D D + K++VD V +A
Sbjct: 61 QALRQ-TDHDDAGTTAAWKAAVDVVVQA-------------------------------- 87
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RDG+ R ILIAG++GPYG + DGSEY G+Y +
Sbjct: 88 RDGAGVD------------------------RKILIAGTIGPYGCFVNDGSEYTGNYTDS 123
Query: 186 VSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244
+ +A HRP ++ L + G D++A ET+P++ E + + L + P+ W+S
Sbjct: 124 PTAEWLAAHHRPLVEFLEKNGDVDVIAFETVPSAVELEAIVALDVQKPY---WVSLCVNS 180
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+ + V R C + L+AVGVNCV VS +E L +PL+ YPN G
Sbjct: 181 SMDLV---ACAAVLRRCNS----SLVAVGVNCVEYSKVSGYLEALSAVGVPLIAYPNYG 232
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERY 572
L+AVGVNCV VS +E L +PL+ YPN G Y
Sbjct: 198 LVAVGVNCVEYSKVSGYLEALSAVGVPLIAYPNYGYIY 235
>gi|319942566|ref|ZP_08016875.1| homocysteine S-methyltransferase [Sutterella wadsworthensis
3_1_45B]
gi|319803862|gb|EFW00784.1| homocysteine S-methyltransferase [Sutterella wadsworthensis
3_1_45B]
Length = 318
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 163/398 (40%), Gaps = 111/398 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG S+ L ++ D LWS+ L D V + H D+ AGA+ V SYQA+
Sbjct: 19 VIDGAMSTPLEAAGLNLND--TLWSAKALLECPDLVRKVHYDYYAAGANAVEACSYQATE 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F ++ + +LI+ S + V+EA D+L+
Sbjct: 77 AAFARK-GIEKAEASRLIRLSGELVREA---------------KNDVLL----------- 109
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH EW DPA D+L AGS+GPYGA L DGSEY G Y
Sbjct: 110 -----------EH------PEW------DPA-DLLTAGSIGPYGAYLADGSEYTGAY--D 143
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++ +H+ R+ L+ +G DILAIET P E + L ++ + W++ + KD
Sbjct: 144 LTREEYYAFHQLRLDELLNSGMDILAIETQPRFDEIEALLAMIAD-RDITCWVTVTLKDG 202
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
+ +G +A+ C + +P + A G NCV+ V +++L + PLVVYPNSGE
Sbjct: 203 D-MPDGTKLEVLAK-CLDADP-HVEAFGFNCVKREWVEPGLKRLSAYTDKPLVVYPNSGE 259
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
YD W
Sbjct: 260 --------------------------------------------------TYDPTTKTWH 269
Query: 365 DRDLCEP-VDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
+ + EP + YV W G +GGCCRT +D + +
Sbjct: 270 AQGVHEPDWNHYVPLWEHTGARCIGGCCRTLPKDIVQI 307
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 511 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSG 569
D + +G +A+ C + +P + A G NCV+ V P +++L + PLVVYPNSG
Sbjct: 201 DGDMPDGTKLEVLAK-CLDADP-HVEAFGFNCVKREWVEPGLKRLSAYTDKPLVVYPNSG 258
Query: 570 ERYD 573
E YD
Sbjct: 259 ETYD 262
>gi|448099028|ref|XP_004199050.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
gi|359380472|emb|CCE82713.1| Piso0_002454 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 129/411 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHP----LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
++DG ++L + + P LWS+ L V + H ++ +G++I+ T +Y
Sbjct: 15 VLDGALGTELESIIPSTSKSQPRDDPLWSTRVLINEPKLVEEVHYRYLMSGSNIITTCTY 74
Query: 62 QASIGGFMEFLD-LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
QAS+ G +++ D + + L + SVD K A AR + +R
Sbjct: 75 QASLCGLLKYGDHFSKEDALGLWQKSVDVGKSA-------ARRYYKECSR---------- 117
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A+ +LIAGS+GPYGA L DGSEY G
Sbjct: 118 -----------------------------------AQRVLIAGSIGPYGAYLADGSEYSG 142
Query: 181 DYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREW-----PHQ 234
+Y + S + ++H ++ L+ D++ +ET+P+ +E ++L +L + ++
Sbjct: 143 NYGD-FSNKQLEQFHFDLMKFLILNKDVDLIGVETLPSLREFKVLFKLFLKLSNKYNSNK 201
Query: 235 KAWLSFSCKDDKHISNGESFTQVARTCYNMNP---------DQLIAVGVNCVRPLMVSSL 285
K + SF K++ + +G S V + +N + ++A+G NC+ +V+S+
Sbjct: 202 KIYFSFDFKNEHVLCDGSSMENVF---FFINKHLAKSQSLANNILAIGCNCIDYKLVTSI 258
Query: 286 IEQLK---TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
+EQ K T +P +VYPN G
Sbjct: 259 LEQFKYLNTFEVPTIVYPNFG--------------------------------------- 279
Query: 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
Y +RY A +DL + + +WLD V L+GGCC T
Sbjct: 280 ----FTYNKGTDRYKA------HKDL-DKWKRLANEWLDYNVKLIGGCCST 319
>gi|134100425|ref|YP_001106086.1| homocysteine methyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|291007321|ref|ZP_06565294.1| homocysteine methyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|133913048|emb|CAM03161.1| homocysteine S-methyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 297
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 159/404 (39%), Gaps = 124/404 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D LWS+ L A + +V H F +AGA I T S
Sbjct: 13 VLDGGLATELEARGHDLSD--ELWSARLLHDAPEEIVAAHEAFFRAGAVIATTAS----- 65
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +S+ G G
Sbjct: 66 ----------YQASFP-----------------------------------GFGARGIGR 80
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
D + VE +A RL +P R +A SVGPYGA+L DGSEYRG Y
Sbjct: 81 GDAAALMRRSVELARQAA----ERL---EPDRPRWVAASVGPYGATLADGSEYRGRYGLT 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
VS+ + +HRPR++ L AG D+LA+ET+P EA L + + AWLS++ D
Sbjct: 134 VSD--LVGFHRPRLEVLAGAGPDVLALETVPDLDEAIALVEAV-DGIGVPAWLSYTVADG 190
Query: 246 KHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS-SLIEQLKTENIPLVVYPN 301
+ + E+F +VAR + + ++AVGVNC P V+ +L + P+V YPN
Sbjct: 191 RTRAGQPLAEAF-EVAR-----DHEDIVAVGVNCCSPAEVAPALAIARQVTGKPVVAYPN 244
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGE +W C+T R+ A
Sbjct: 245 SGE----------------------DWDAH-------CRTW--------TGASRFPGTAA 267
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+ W EG A++GGCCR +D + L
Sbjct: 268 ---------------SAWAHEGAAVIGGCCRVRPDDIADLAATL 296
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYDFH 575
+ ++AVGVNC P V+P + + P+V YPNSGE +D H
Sbjct: 209 EDIVAVGVNCCSPAEVAPALAIARQVTGKPVVAYPNSGEDWDAH 252
>gi|408681500|ref|YP_006881327.1| Homocysteine S-methyltransferase [Streptomyces venezuelae ATCC
10712]
gi|328885829|emb|CCA59068.1| Homocysteine S-methyltransferase [Streptomyces venezuelae ATCC
10712]
Length = 307
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 153/401 (38%), Gaps = 120/401 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA + + H +++AGA +++T
Sbjct: 17 VLDGGLSNQLEAQGCDLSDA--LWSARLLADGPEQIEAAHAAYVRAGARVLIT------- 67
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
SSYQ ++V+ AR A + L+A SV
Sbjct: 68 ------------SSYQ---ATVE----------GFARRGVGRAAAERLLARSV------- 95
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E R ++ +A SVGPYGA L DGSEYRG Y
Sbjct: 96 --------------------ELARAAARGVREEVWVAASVGPYGAMLADGSEYRGRYGLS 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
V E + +HRPRI+ L A D+LA+ET+P ++EA+ L R E WLS++ +
Sbjct: 136 VRE--LEAFHRPRIEVLAAAEPDVLALETVPDAEEAEALLRAA-EGCGVPVWLSYTVEGG 192
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP-LMVSSLIEQLKTENIPLVVYPNSGE 304
+ + + A N DQ++AVGVNC P +++ P VVYPNSGE
Sbjct: 193 RTRAGQDLAEAFAVAAGN---DQVVAVGVNCCDPAEAGAAVALAAAVTGRPGVVYPNSGE 249
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
R+DA W
Sbjct: 250 --------------------------------------------------RWDARARGWR 259
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+P T W G LVGGCCR E + L
Sbjct: 260 GAVAFDPA--LATGWAASGARLVGGCCRVGPETIAALATTL 298
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
DQ++AVGVNC P + P VVYPNSGER+D
Sbjct: 211 DQVVAVGVNCCDPAEAGAAVALAAAVTGRPGVVYPNSGERWD 252
>gi|315038240|ref|YP_004031808.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL 1112]
gi|312276373|gb|ADQ59013.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL 1112]
Length = 331
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 154/392 (39%), Gaps = 117/392 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D LW++ L D V + H ++ +AGA + +T++YQA++
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + Y S D KE IA A+ DD + I V
Sbjct: 71 QAFEK-------HGY-----SEDKAKEMIADAVKIAKKARDDFEKKTGIHNYV------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A SVGPYGA L G E+RGDY
Sbjct: 112 ------------------------------------AASVGPYGAYLAKGDEFRGDY--D 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+++ ++H PR+Q L++ D LAIET P E +L L+E P ++SF+ D
Sbjct: 134 LTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWLKENAPEMPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK---TENIPLVVYPN 301
IS+G +V DQ+ AVG NC +P + ++ I++++ +NI +VYPN
Sbjct: 194 TTKISDGTPLKKVMEKINEY--DQVFAVGANCFKPFLATTAIDKMREFTKKNI--IVYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G + E+ ++ W+ F+ K +
Sbjct: 250 LG-------------------GVYNEF--ERNWIPFNAKFD------------------- 269
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
K +W + G ++GGCC T
Sbjct: 270 ----------FGKLSKEWYEHGACIIGGCCST 291
>gi|182435369|ref|YP_001823088.1| homocysteine methyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463885|dbj|BAG18405.1| putative homocysteine S-methyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 307
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 156/411 (37%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL D+ D LWS+ LA A + + H +++AGA +++T S
Sbjct: 15 AGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARVLITAS- 71
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Y ++++ R D A L+A SV
Sbjct: 72 --------------YQATFE-----------------GFGRYGLDRAATGALLARSV--- 97
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
E DP R+ +A SVGPYGA L DGSEYRG
Sbjct: 98 -------------------ELARRAAEAARRADPGRETWVAASVGPYGAMLADGSEYRGR 138
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE--WPHQKAWLS 239
Y V E + +HRPR+ AL AG D LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 139 YGLSVRE--LERFHRPRVAALAAAGPDALALETVPDLDEAEALVRVAEETGLPY---WLS 193
Query: 240 FSCKDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ-LKTENIP 295
+S D + + E+F A D ++AVGVNC P +EQ + P
Sbjct: 194 YSVADGRTRAGQPLQEAFAVAA------GRDSVLAVGVNCCDPQEARGAVEQAVAVTGRP 247
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 248 AVVYPNSGEG-------------------------------------------------- 257
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W +P V W G LVGGCCR + + RL+
Sbjct: 258 WDAGARGWTGHGTFDP--GQVRAWTRAGARLVGGCCRVGPDLITELDGRLE 306
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQ-LKTENIPLVVYPNSGERYD 573
D ++AVGVNC P +EQ + P VVYPNSGE +D
Sbjct: 218 DSVLAVGVNCCDPQEARGAVEQAVAVTGRPAVVYPNSGEGWD 259
>gi|302555024|ref|ZP_07307366.1| homocysteine methyltransferase [Streptomyces viridochromogenes DSM
40736]
gi|302472642|gb|EFL35735.1| homocysteine methyltransferase [Streptomyces viridochromogenes DSM
40736]
Length = 303
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 139/307 (45%), Gaps = 72/307 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL + D+ D LWS+ LA +AV + H + +AGAD+ +T S
Sbjct: 13 AGTVVLDGGMSNQLESAGHDLSD--ELWSARLLAEQPEAVTEAHLAYFRAGADVAITAS- 69
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Y ++++ + K I +P R
Sbjct: 70 --------------YQATFE------GFGKRGI------------NPGR----------- 86
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
+E VE EA +R + +A SVGPYGA L DGSEYRG
Sbjct: 87 ------AAELMALSVESAREAAG-------QAGVSRPLWVAASVGPYGAMLADGSEYRGR 133
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
Y V E + +HRPR++AL A D+LA+ET+P ++EA L R +R AWL++S
Sbjct: 134 YGLTVDE--LERFHRPRMEALAAARPDVLALETVPDAEEAAALLRAVRGL-GVPAWLTYS 190
Query: 242 CKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMV-SSLIEQLKTENIPLV 297
+ E+F A + D++IAVGVNC P V + + P+V
Sbjct: 191 IAGGSTRAGQPLEEAFALAA------DVDEVIAVGVNCCAPEDVDGAAATAARVTGKPVV 244
Query: 298 VYPNSGE 304
+YPNSGE
Sbjct: 245 IYPNSGE 251
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 338 SCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+ + P+V+YPNSGE ++A W R P V W G L+GGCCR E
Sbjct: 235 AARVTGKPVVIYPNSGETWNAEARAWTGRSTFTP--DQVKGWQQAGARLIGGCCRVGPE 291
>gi|326776008|ref|ZP_08235273.1| Homocysteine S-methyltransferase [Streptomyces griseus XylebKG-1]
gi|326656341|gb|EGE41187.1| Homocysteine S-methyltransferase [Streptomyces griseus XylebKG-1]
Length = 305
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 156/411 (37%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL D+ D LWS+ LA A + + H +++AGA +++T S
Sbjct: 13 AGPVLLDGGLSNQLEAQGCDLSD--ALWSARLLADAPEQIEAAHLAYLRAGARVLITAS- 69
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Y ++++ R D A L+A SV
Sbjct: 70 --------------YQATFE-----------------GFGRYGLDRAATGALLARSV--- 95
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
E DP R+ +A SVGPYGA L DGSEYRG
Sbjct: 96 -------------------ELARGAADAARRADPGREAWVAASVGPYGAMLADGSEYRGR 136
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE--WPHQKAWLS 239
Y V E + +HRPR+ AL AG D LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 137 YGLSVRE--LERFHRPRVAALAAAGPDALALETVPDLDEAEALVRVAEETGLPY---WLS 191
Query: 240 FSCKDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ-LKTENIP 295
+S D + + E+F A D ++AVGVNC P +EQ + P
Sbjct: 192 YSVADGRTRAGQPLQEAFAVAA------GRDSVLAVGVNCCDPQEAQGAVEQAVAVTGRP 245
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 246 AVVYPNSGEG-------------------------------------------------- 255
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W +P V W G LVGGCCR + + RL+
Sbjct: 256 WDAGARGWTGHGTFDP--GRVRAWTRAGAGLVGGCCRVGPDLITELDGRLE 304
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQ-LKTENIPLVVYPNSGERYD 573
D ++AVGVNC P +EQ + P VVYPNSGE +D
Sbjct: 216 DSVLAVGVNCCDPQEAQGAVEQAVAVTGRPAVVYPNSGEGWD 257
>gi|318058173|ref|ZP_07976896.1| homocysteine methyltransferase [Streptomyces sp. SA3_actG]
gi|318078928|ref|ZP_07986260.1| homocysteine methyltransferase [Streptomyces sp. SA3_actF]
Length = 304
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 133/305 (43%), Gaps = 81/305 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++L + D LWS+ L A+ HR + +AGA++ T SYQAS
Sbjct: 24 VLDGGLSNELEAAGHGLAD--ALWSARLLRDEPAALTGAHRAYAEAGAEVATTASYQASF 81
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVK--EAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF + +D + E +AL T AR
Sbjct: 82 EGFA--------------RHGIDAARTRELLALSVTAAR--------------------- 106
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
A + W +A SVGPYGA L DGSEYRG Y
Sbjct: 107 ------------------AAGSRW-------------VAASVGPYGAMLADGSEYRGRY- 134
Query: 184 EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243
V A + +H PR+ AL+ AG D+LA+ET+P ++EA+ L ++R WLS+S
Sbjct: 135 -GVGRAALERFHGPRVDALLAAGPDVLALETVPDAEEARALLAVVRGC-GVPVWLSYSVA 192
Query: 244 DDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPL-MVSSLIEQLKTENIPLVVYP 300
D + + Q + + ++++AVGVNC PL + ++ + P V YP
Sbjct: 193 DGRTRAG-----QPLDAAFGLAAEAEEVVAVGVNCCEPLEVADAVRRAVAASGKPGVAYP 247
Query: 301 NSGEH 305
NSGE
Sbjct: 248 NSGER 252
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 51/136 (37%), Gaps = 48/136 (35%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------------- 338
+G +LA+ET+P ++EA+ L ++R WLS+S
Sbjct: 155 AGPDVLALETVPDAEEARALLAVVRGC-GVPVWLSYSVADGRTRAGQPLDAAFGLAAEAE 213
Query: 339 ---------CK-------------TENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
C+ P V YPNSGER+DA W R V +
Sbjct: 214 EVVAVGVNCCEPLEVADAVRRAVAASGKPGVAYPNSGERWDAHARGW--RSDPSFVPELA 271
Query: 377 TDWLDEGVALVGGCCR 392
W G LVGGCCR
Sbjct: 272 AQWYAAGARLVGGCCR 287
>gi|385817572|ref|YP_005853962.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
gi|327183510|gb|AEA31957.1| homocysteine methyltransferase [Lactobacillus amylovorus GRL1118]
Length = 331
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 154/392 (39%), Gaps = 117/392 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D LW++ L D V + H ++ +AGA + +T++YQA++
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + Y S D KE IA A+ DD + I V
Sbjct: 71 QAFEK-------HGY-----SEDKAKEMIADAVKIAKKARDDFEKKTGIHNYV------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A SVG YGA L +G E+RGDY
Sbjct: 112 ------------------------------------AASVGSYGAYLAEGDEFRGDY--D 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+++ ++H PR+Q L++ D LAIET P E +L L+E P ++SF+ D
Sbjct: 134 LTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWLKENAPEMPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK---TENIPLVVYPN 301
IS+G +V DQ+ AVG NC +P + ++ I++++ +NI +VYPN
Sbjct: 194 TTKISDGTPLKKVMEKINEY--DQVFAVGANCFKPFLATTAIDKMREFTKKNI--IVYPN 249
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G + E+ ++ W+ F+ K +
Sbjct: 250 LG-------------------GIYNEF--ERNWIPFNAKFD------------------- 269
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
K +W + G ++GGCC T
Sbjct: 270 ----------FGKLSKEWYEHGACIIGGCCST 291
>gi|403047452|ref|ZP_10902920.1| homocysteine methyltransferase [Staphylococcus sp. OJ82]
gi|402762986|gb|EJX17080.1| homocysteine methyltransferase [Staphylococcus sp. OJ82]
Length = 300
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 157/404 (38%), Gaps = 122/404 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L D+ LWSS L + Q H+DF AGADI++T++
Sbjct: 14 VLDGGLATTLEQAGCDL--NSSLWSSEVLRHQPIKIKQAHQDFTNAGADIILTST----- 66
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +SYQ T I + D L +V
Sbjct: 67 ----------YQASYQ-----------------TFTDIGMQNEEIDDLFTIAV------- 92
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V +AT + ++ GS+GPYGA L DGSEY G+YV
Sbjct: 93 -----------EQVMDAT------------NNNQVVVGSLGPYGAYLSDGSEYTGNYV-- 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR--LLREWPHQKAWLSFSCK 243
+S ++H RI AL+ G + ET+P +E Q + + Q W+S +
Sbjct: 128 ISREAYFKFHEQRINALISRGINDFVFETVPNFEEIQAIIENIIPSYTEEQTFWISVTVD 187
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAV-GVNCVRPLMVS-SLIEQLKTENIPLVVYPN 301
D ++S+G F ++ Y +I + G+NC ++ SL + L + + + +YPN
Sbjct: 188 DTGNLSDGTEFEKLID--YIKQKGTIIPIFGINCSSVKGINRSLDKGLASLSQTIALYPN 245
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G H Y+A +
Sbjct: 246 GGSH--------------------------------------------------YNADSK 255
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+W + + + + V WL EGV ++GGCC+T ED +KH +
Sbjct: 256 KWENDANSDEIIEQVPKWLMEGVQIIGGCCQTTPEDIKKIKHSM 299
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRL 506
V WL EGV ++GGCC+T ED +KH +
Sbjct: 270 VPKWLMEGVQIIGGCCQTTPEDIKKIKHSM 299
>gi|398780766|ref|ZP_10545053.1| homocysteine methyltransferase [Streptomyces auratus AGR0001]
gi|396997905|gb|EJJ08845.1| homocysteine methyltransferase [Streptomyces auratus AGR0001]
Length = 306
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 134/300 (44%), Gaps = 63/300 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S+QL D+ D LWS+ LA AVV+ H+ + +AGA + +T SYQA+
Sbjct: 18 VLDGGLSNQLEAAGHDLSDA--LWSARLLAEEPAAVVRAHQAYYEAGAQVAITASYQATF 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF + + + +L++ SV+ +EA + +A S GPYGA L
Sbjct: 76 EGFARR-GIGAERAAELLRRSVELAREAAGRARAGGVA------GPLYVAASAGPYGAML 128
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y +S A + +H
Sbjct: 129 ADGSEYRGRY--GLSVAALERFH------------------------------------- 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
RPR++ L A D+LA+ET+P ++EA+ L R +R A+LS+S
Sbjct: 150 ----------RPRLEVLAAARPDVLALETVPDAEEARALLRAVRGL-GVPAYLSYSVAGG 198
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGE 304
G+ + + + ++IAVGVNC P + + P+VVYPNSGE
Sbjct: 199 -CTRAGQPLAEAFAVAADAD--EVIAVGVNCCAPDDADRAVRLAARITGKPVVVYPNSGE 255
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 105/238 (44%), Gaps = 57/238 (23%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPAS 218
+ +A S GPYGA L DGSEYRG Y +S A + +HRPR++ L A D+LA+ET+P +
Sbjct: 115 LYVAASAGPYGAMLADGSEYRGRY--GLSVAALERFHRPRLEVLAAARPDVLALETVPDA 172
Query: 219 KEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 278
+EA+ L R +R A+LS+S G+ + + + ++IAVGVNC
Sbjct: 173 EEARALLRAVRGL-GVPAYLSYSVAGG-CTRAGQPLAEAFAVAADAD--EVIAVGVNCC- 227
Query: 279 PLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS 338
A +A RL +
Sbjct: 228 -----------------------------------APDDADRAVRL-------------A 239
Query: 339 CKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+ P+VVYPNSGE +DA W + D+ V W +G L+GGCCR E
Sbjct: 240 ARITGKPVVVYPNSGESWDAAARAWCGSPAFD-ADR-VAGWAADGARLIGGCCRVGPE 295
>gi|336054181|ref|YP_004562468.1| homocysteine methyltransferase [Lactobacillus kefiranofaciens ZW3]
gi|333957558|gb|AEG40366.1| Homocysteine methyltransferase [Lactobacillus kefiranofaciens ZW3]
Length = 330
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 159/391 (40%), Gaps = 115/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG S+ L +I + LW++ L D + Q H + KAGA + +T++YQA++
Sbjct: 13 IIDGAMSTALEH--EEIDTNNDLWTAIALEKDLDKIYQVHLKYFKAGAQLAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F++ + +I ++V K+A I + +AGSVG YGA L
Sbjct: 71 QAFVKH-GFTKKQAATMIANAVKVAKKARDDYEVQTGIHN-------FVAGSVGSYGAYL 122
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG E+RGDY
Sbjct: 123 ADGDEFRGDY-------------------------------------------------S 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+++ ++H PR++ ++ D LAIET P E + L+E P ++SF+ D
Sbjct: 134 LTDRQYLDFHLPRLRVILANQPDCLAIETQPKLDEPVAILNWLKENTPTIPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNS 302
IS+G T + + +N DQ+ AVGVNC +P + ++ I++++ + +VVYPN
Sbjct: 194 TTKISDG---TPLKKAMQKLNDYDQVFAVGVNCFKPFLATAAIDKMREFTDKQIVVYPNL 250
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G + E+ ++ W+ F NA+
Sbjct: 251 G-------------------GVYNEF--ERNWIPF----------------------NAK 267
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + L + +W + G ++GGCC T
Sbjct: 268 FDFKKLSQ-------EWYEHGARMIGGCCST 291
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 469 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCY 528
L EPV + +WL E + Y TLH D IS+G T + +
Sbjct: 166 LDEPVA--ILNWLKENTPTIP----VYVSFTLH--------DTTKISDG---TPLKKAMQ 208
Query: 529 NMNP-DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
+N DQ+ AVGVNC +P + + I++++ + +VVYPN G Y+
Sbjct: 209 KLNDYDQVFAVGVNCFKPFLATAAIDKMREFTDKQIVVYPNLGGVYN 255
>gi|284991488|ref|YP_003410042.1| homocysteine S-methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284064733|gb|ADB75671.1| homocysteine S-methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 314
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 104/241 (43%), Gaps = 59/241 (24%)
Query: 156 ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI 215
A D IAGSVGPYGA+L DGSEY G Y + + + +WHRPR++ L EAGAD+LA ET+
Sbjct: 101 APDAWIAGSVGPYGAALADGSEYTGAYADEIGVDRLRQWHRPRMEWLAEAGADVLACETV 160
Query: 216 PASKEAQMLCRLLREWPHQKAWLSFSCKDDK----HISNGESFTQVARTCYNMNPDQLIA 271
PA+ EA+ L + WLS + D GE +V ++ D ++A
Sbjct: 161 PAAAEAEALL-EEADMLGMPVWLSLTTVLDSDGVVRTRRGEPAGEVFAMARDL--DAVVA 217
Query: 272 VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ 331
VGVNC P V + + P+VVYPNSGE
Sbjct: 218 VGVNCTDPDGVLAAVTAAGVAGRPVVVYPNSGE--------------------------- 250
Query: 332 KAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391
R+DA RW P + W+ G LVGGCC
Sbjct: 251 -----------------------RWDAAGRRWTGTAGLSPHNALT--WVHAGARLVGGCC 285
Query: 392 R 392
R
Sbjct: 286 R 286
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573
D ++AVGVNC P V + P+VVYPNSGER+D
Sbjct: 213 DAVVAVGVNCTDPDGVLAAVTAAGVAGRPVVVYPNSGERWD 253
>gi|290983000|ref|XP_002674217.1| homocysteine S-methyltransferase [Naegleria gruberi]
gi|284087806|gb|EFC41473.1| homocysteine S-methyltransferase [Naegleria gruberi]
Length = 342
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 109/409 (26%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAG-ADIVMTNSYQASIGGFMEFLDLDYDS--SYQLIK 84
LW + +L A+ + H D++ G DI ++SYQ S E L D+ S + I+
Sbjct: 12 LWGANYLLENPKAIAKVHSDYVHEGLCDICTSSSYQIS----QEGLAADHVSMKEEERIE 67
Query: 85 SSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGAS----LRDGSEYRGDYVEHVS 140
+ ++++ + R ++ L+A SV +GAS L + EY GDY++ +
Sbjct: 68 LASRMFRDSVQIARKVVR------EKEKLVAASVSCFGASISNLLGEAKEYFGDYLDEDA 121
Query: 141 EATMAEW-HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVS-EATMAEWHRPR 198
++ + H+ + + SE G+ +E E + ++H PR
Sbjct: 122 DSNSGHYVHKFV---------------------KQLSEKLGETLEKSGMEQVIYDFHYPR 160
Query: 199 IQALVEAGADILAIETIPASKEAQMLCR-----LLREWPHQ--KAWLSFSCKDDKHISNG 251
++ L+ A D + +ET+P KE ++LC +L+E + K +SF CKD H +G
Sbjct: 161 VRELILAEPDFILLETMPVLKEVEILCDRVIPDILKELNKKGIKVMISFYCKDGLHTGHG 220
Query: 252 ESFTQ----VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHIL 307
ES + V + +N + ++ AVG NC+ P +V LIE + T
Sbjct: 221 ESIEKCVEYVNQDRFNPSLFEIFAVGANCISPSIVPILIENIHTH--------------- 265
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW---- 363
LR+ +I +++YPNSGE YD + W
Sbjct: 266 -----------------LRK---------------DISIILYPNSGEIYDNLTKSWSIPQ 293
Query: 364 ------IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
DRD + K+ + + + ++GGCCRT + + + L+
Sbjct: 294 GGLDWLYDRDFIPFIKKWSENHPERKL-VIGGCCRTNPRNIKKLANSLN 341
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 510 DDKHISNGESFTQ----VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKT---ENIPL 562
D H +GES + V + +N + ++ AVG NC+ P +V LIE + T ++I +
Sbjct: 213 DGLHTGHGESIEKCVEYVNQDRFNPSLFEIFAVGANCISPSIVPILIENIHTHLRKDISI 272
Query: 563 VVYPNSGERYD 573
++YPNSGE YD
Sbjct: 273 ILYPNSGEIYD 283
>gi|325956688|ref|YP_004292100.1| homocysteine methyltransferase [Lactobacillus acidophilus 30SC]
gi|325333253|gb|ADZ07161.1| homocysteine methyltransferase [Lactobacillus acidophilus 30SC]
Length = 331
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 131/302 (43%), Gaps = 67/302 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D LW++ L D V + H ++ +AGA + +T++YQA++
Sbjct: 13 VLDGAMSTALEKQGIDT--NTDLWTAVALDKDLDKVYKVHMNYFQAGAQMAITDTYQANV 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F + Y S D KE IA A+ DD + I V
Sbjct: 71 QAFEK-------HGY-----SEDKAKEMIADAVKIAKKARDDFEKKTGIHNYV------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A SVG YGA L +G E+RGDY
Sbjct: 112 ------------------------------------AASVGSYGAYLAEGDEFRGDY--D 133
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
+++ ++H PR+Q L++ D LAIET P E +L L+E P ++SF+ D
Sbjct: 134 LTKKQYLDFHLPRLQVLLQNKPDCLAIETQPKLDEVVVLLDWLKENAPEMPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK---TENIPLVVYPN 301
IS+G +V DQ+ AVG NC +P + ++ I++++ +NI +VYPN
Sbjct: 194 TTKISDGTPLKKVMEKINEY--DQVFAVGANCFKPFLATTAIDKMREFTKKNI--IVYPN 249
Query: 302 SG 303
G
Sbjct: 250 LG 251
>gi|255727863|ref|XP_002548857.1| hypothetical protein CTRG_03154 [Candida tropicalis MYA-3404]
gi|240133173|gb|EER32729.1| hypothetical protein CTRG_03154 [Candida tropicalis MYA-3404]
Length = 312
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 61/277 (22%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS L + V Q H D+I AGADI++T++YQ S ++ D S +L S++
Sbjct: 40 LWSGQALINNPELVEQVHLDYINAGADIIITSTYQTSYASLNKYAGYDMKKSVELWNSAL 99
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
K A+ RS D++IAGS+GPY L +GSEY GDY
Sbjct: 100 GAAKNAVNRSG-----RS-----DVIIAGSIGPYATVLANGSEYSGDY------------ 137
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
GA+ D + E+H P + +
Sbjct: 138 --------------------QGATYDD----------------LVEYHTPLFEFYDNSDV 161
Query: 208 DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM-NP 266
D++ IETIP E +++ +++++ ++ +++ + + +S+G + +VA + +
Sbjct: 162 DVICIETIPNFTELKVVIDMMKKYTKKEYFIAVNPQTANALSDGTTLDKVAEVFKTIEDT 221
Query: 267 DQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
+ + VG+NC +V+ +++ + P+++YPN G
Sbjct: 222 SRFLGVGINCTNYDLVNDILKYFT--DFPVLIYPNMG 256
>gi|291236400|ref|XP_002738127.1| PREDICTED: CG10621-like, partial [Saccoglossus kowalevskii]
Length = 170
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 191 MAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISN 250
+ WHR + +V G D LA ET+PA KEA+ + +LL+E+P KAW+SFSCKD +H +
Sbjct: 2 LINWHRETVDVIVNTGIDYLAFETVPALKEAEAIVQLLQEYPSTKAWISFSCKDGEHTCH 61
Query: 251 GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE--NIPLVVYPNSGEHILA 308
GE F+ + + ++AVG+NC P + SL++ + E + VVYPN +I
Sbjct: 62 GEKFSDAVKVA--ASSPSVVAVGINCTPPQYIKSLLKSSENEIGDKIFVVYPNGASYIGG 119
Query: 309 IETIPASKEAQMLCRLLREWPNQKA-WLSFSC 339
++ + LC + +W N A W+ C
Sbjct: 120 -GLWKKNENNKNLCAYVPDWINAGANWIGGCC 150
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 49/160 (30%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK----------------- 340
V N+G LA ET+PA KEA+ + +LL+E+P+ KAW+SFSCK
Sbjct: 12 VIVNTGIDYLAFETVPALKEAEAIVQLLQEYPSTKAWISFSCKDGEHTCHGEKFSDAVKV 71
Query: 341 --------------------------TEN----IPLVVYPNSGERYDAVNARWIDRDLCE 370
+EN VVYPN G Y W + +
Sbjct: 72 AASSPSVVAVGINCTPPQYIKSLLKSSENEIGDKIFVVYPN-GASYIG-GGLWKKNENNK 129
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
+ YV DW++ G +GGCC ++ ++ + D ++
Sbjct: 130 NLCAYVPDWINAGANWIGGCCMIGSQQIQDIRQAMVDTIA 169
>gi|256843183|ref|ZP_05548671.1| homocysteine methyltransferase [Lactobacillus crispatus 125-2-CHN]
gi|293380962|ref|ZP_06626994.1| homocysteine S-methyltransferase [Lactobacillus crispatus 214-1]
gi|423318721|ref|ZP_17296598.1| hypothetical protein HMPREF9250_01063 [Lactobacillus crispatus
FB049-03]
gi|256614603|gb|EEU19804.1| homocysteine methyltransferase [Lactobacillus crispatus 125-2-CHN]
gi|290922459|gb|EFD99429.1| homocysteine S-methyltransferase [Lactobacillus crispatus 214-1]
gi|405593369|gb|EKB66819.1| hypothetical protein HMPREF9250_01063 [Lactobacillus crispatus
FB049-03]
Length = 329
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 156/391 (39%), Gaps = 115/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D + LW++ L + Q H ++ KAGA + +T++YQA+I
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAITDTYQANI 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E D + +LI ++V A+ DD A+ I V
Sbjct: 71 PAF-EKHGFTQDQATKLITNAVQI-----------AKKARDDFAKTTGIHNYV------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A SVGPYGA L G E+RGDY
Sbjct: 112 ------------------------------------AASVGPYGAYLAQGDEFRGDYSLT 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
E +H PR++ L+ D LA+ET P E + L+E P ++SF+ D
Sbjct: 136 TEE--YLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLKENAPEFPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
IS+G T + R +N DQ+ A+G NC +P + +++I+++ + +V+YPN
Sbjct: 194 TTKISDG---TPLKRVVQKLNEYDQVFAIGANCFKPFLATAVIDKIHDFTDKQIVIYPNL 250
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G + E+ ++ W+ F NA+
Sbjct: 251 G-------------------GVYNEF--ERNWIPF----------------------NAK 267
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + L + +W + G ++GGCC T
Sbjct: 268 FDFKKLSQ-------EWYEHGARIIGGCCST 291
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQL 535
+ DWL E Y TLH D IS+G T + R +N DQ+
Sbjct: 172 ILDWLKENAPEFP----VYVSFTLH--------DTTKISDG---TPLKRVVQKLNEYDQV 216
Query: 536 IAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
A+G NC +P + + +I+++ + +V+YPN G Y+
Sbjct: 217 FAIGANCFKPFLATAVIDKIHDFTDKQIVIYPNLGGVYN 255
>gi|428169266|gb|EKX38202.1| hypothetical protein GUITHDRAFT_115747 [Guillardia theta CCMP2712]
Length = 261
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 110/256 (42%), Gaps = 67/256 (26%)
Query: 162 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEA 221
A SVG YGASL DGSEY G Y + + + +H R++ LV+ D+LA ETIP E
Sbjct: 59 AASVGCYGASLADGSEYTGIY--DIGKEEVKAFHLERLKLLVKEEPDVLAFETIPNLMEV 116
Query: 222 QMLCRLLREWPHQ-------KAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAV 272
+ + +L HQ AW+S C+ D+ +S+GE R +P QL+AV
Sbjct: 117 EAILDVLN---HQDVSSSEIPAWISVCCRSDECLSSGEPVDDFVRLVAARSPATRQLVAV 173
Query: 273 GVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK 332
GVNC+ P V ++E++K +
Sbjct: 174 GVNCLHPRYVEKILERMKVGS--------------------------------------- 194
Query: 333 AWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKY---VTDWLDEGVALVGG 389
+ LVVY N GE +DA RW+ E D+Y W G ++GG
Sbjct: 195 ----------KLALVVYANKGEEWDAEEKRWMPGTATED-DEYCRMAEMWRSMGANMIGG 243
Query: 390 CCRTYAEDTLHMKHRL 405
CCRT + ++ +L
Sbjct: 244 CCRTSVDTIRMLRQKL 259
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 511 DKHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPN 567
D+ +S+GE R +P QL+AVGVNC+ P V ++E++K + LVVY N
Sbjct: 144 DECLSSGEPVDDFVRLVAARSPATRQLVAVGVNCLHPRYVEKILERMKVGSKLALVVYAN 203
Query: 568 SGERYDFHLADEKN 581
GE +D A+EK
Sbjct: 204 KGEEWD---AEEKR 214
>gi|227878574|ref|ZP_03996499.1| homocysteine methyltransferase [Lactobacillus crispatus JV-V01]
gi|256850218|ref|ZP_05555647.1| homocysteine methyltransferase [Lactobacillus crispatus MV-1A-US]
gi|262046390|ref|ZP_06019352.1| homocysteine methyltransferase [Lactobacillus crispatus MV-3A-US]
gi|295692940|ref|YP_003601550.1| homocysteine s-methyltransferase [Lactobacillus crispatus ST1]
gi|312977407|ref|ZP_07789155.1| homocysteine S-methyltransferase [Lactobacillus crispatus CTV-05]
gi|423321643|ref|ZP_17299514.1| hypothetical protein HMPREF9249_01514 [Lactobacillus crispatus
FB077-07]
gi|227861831|gb|EEJ69425.1| homocysteine methyltransferase [Lactobacillus crispatus JV-V01]
gi|256712855|gb|EEU27847.1| homocysteine methyltransferase [Lactobacillus crispatus MV-1A-US]
gi|260573261|gb|EEX29819.1| homocysteine methyltransferase [Lactobacillus crispatus MV-3A-US]
gi|295031046|emb|CBL50525.1| Homocysteine S-methyltransferase [Lactobacillus crispatus ST1]
gi|310895838|gb|EFQ44904.1| homocysteine S-methyltransferase [Lactobacillus crispatus CTV-05]
gi|405593312|gb|EKB66763.1| hypothetical protein HMPREF9249_01514 [Lactobacillus crispatus
FB077-07]
Length = 329
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 154/391 (39%), Gaps = 115/391 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L D + LW++ L + Q H ++ KAGA + +T++YQA+I
Sbjct: 13 ILDGAMSTALEKLGIDT--NNELWTAIALEHNLAQIYQVHMNYFKAGAQMAITDTYQANI 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F E D + +LI ++V A AR DD A+ I V
Sbjct: 71 PAF-EKHGFTQDQATKLITNAVQI--------AKKAR---DDFAKTTGIHNYV------- 111
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
A SVGPYGA L G E+RGDY
Sbjct: 112 ------------------------------------AASVGPYGAYLAQGDEFRGDYSLT 135
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKD 244
E +H PR++ L+ D LA+ET P E + L+E P ++SF+ D
Sbjct: 136 TEE--YLNFHLPRLKILLANKPDCLALETQPKLDEVVAILDWLKENAPEIPVYVSFTLHD 193
Query: 245 DKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVYPNS 302
IS+G T + R +N DQ+ A+G NC +P + +++I+++ + +V+YPN
Sbjct: 194 TTKISDG---TPLKRVVQKLNEYDQVFAIGANCFKPFLATAVIDKIHDFTDKQIVIYPNL 250
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G + E+ ++ W+ F+ K +
Sbjct: 251 G-------------------GVYNEF--ERNWIPFNAKFD-------------------- 269
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
K +W + G ++GGCC T
Sbjct: 270 ---------FKKLSQEWYEHGARIIGGCCST 291
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNP-DQL 535
+ DWL E + Y TLH D IS+G T + R +N DQ+
Sbjct: 172 ILDWLKENAPEIP----VYVSFTLH--------DTTKISDG---TPLKRVVQKLNEYDQV 216
Query: 536 IAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
A+G NC +P + + +I+++ + +V+YPN G Y+
Sbjct: 217 FAIGANCFKPFLATAVIDKIHDFTDKQIVIYPNLGGVYN 255
>gi|392970833|ref|ZP_10336234.1| putative homocysteine methyltransferase [Staphylococcus equorum
subsp. equorum Mu2]
gi|392511183|emb|CCI59478.1| putative homocysteine methyltransferase [Staphylococcus equorum
subsp. equorum Mu2]
Length = 300
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 156/404 (38%), Gaps = 122/404 (30%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L D+ LWSS L + Q H+DF AGADI++T++
Sbjct: 14 VLDGGLATTLEQAGCDL--NSSLWSSEVLRHQPIKIKQAHQDFTNAGADIILTST----- 66
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
Y +SYQ T I + D L +V
Sbjct: 67 ----------YQASYQ-----------------TFTDIGMQNEEIDDLFTIAV------- 92
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
E V +AT + ++ GS+GPYGA L DGSEY G+YV
Sbjct: 93 -----------EQVMDAT------------NNNQVVVGSLGPYGAYLSDGSEYTGNYV-- 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR--LLREWPHQKAWLSFSCK 243
+S ++ RI AL+ G + ET+P +E Q + + Q W+S +
Sbjct: 128 ISREAYFKFQEQRINALISRGINDFVFETVPNFEEIQAIIENIIPSYTEEQTFWISVTVD 187
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAV-GVNCVRPLMVS-SLIEQLKTENIPLVVYPN 301
D ++S+G F ++ Y +I + G+NC ++ SL + L + + + +YPN
Sbjct: 188 DTGNLSDGTEFEKLID--YIKQKGTIIPIFGINCSSVKGINRSLDKGLASLSQTIALYPN 245
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
G H Y+A +
Sbjct: 246 GGSH--------------------------------------------------YNADSK 255
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
+W + + + + V WL EGV ++GGCC+T ED +KH +
Sbjct: 256 KWENDANSDEIIEQVPKWLMEGVQIIGGCCQTTPEDIKKIKHSM 299
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRL 506
V WL EGV ++GGCC+T ED +KH +
Sbjct: 270 VPKWLMEGVQIIGGCCQTTPEDIKKIKHSM 299
>gi|365863599|ref|ZP_09403309.1| homocysteine methyltransferase [Streptomyces sp. W007]
gi|364006959|gb|EHM27989.1| homocysteine methyltransferase [Streptomyces sp. W007]
Length = 309
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 152/411 (36%), Gaps = 125/411 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A L+DGG S+QL D+ D LWS+ LA A + + H +++AGA +
Sbjct: 13 AGPVLLDGGLSNQLEAQGCDLSDA--LWSARLLADAPEQIEAAHLAYLRAGARV------ 64
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
+ Y ++++ R D + L+A SV
Sbjct: 65 ---------LITASYQATFE-----------------GFGRYGLDRAGTEALLARSV--- 95
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
E P R+ +A SVGPYGA L DGSEYRG
Sbjct: 96 -------------------ELARGAAEAARRAGPGRETWVAASVGPYGAMLADGSEYRGR 136
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW--PHQKAWLS 239
Y V E + +HRPR+ AL AG D LA+ET+P EA+ L R+ E P+ WLS
Sbjct: 137 YGLSVRE--LEHFHRPRVAALAAAGPDALALETVPDLDEAEALVRVAEETGVPY---WLS 191
Query: 240 FSCKDDKHISNG---ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ-LKTENIP 295
+S + + E+F A D ++AVGVNC P +EQ + P
Sbjct: 192 YSVAGGRTRAGQPLEEAFAVAA------GRDSVLAVGVNCCDPEEAQGAVEQAVAVTGRP 245
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
VVYPNSGE
Sbjct: 246 AVVYPNSGEG-------------------------------------------------- 255
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+DA W R +P V W G LVGGCCR + + RL+
Sbjct: 256 WDAAARGWTGRGTFDP--GRVRAWTRAGARLVGGCCRVGPDLITELDGRLE 304
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 533 DQLIAVGVNCVRPLMVSPLIEQ-LKTENIPLVVYPNSGERYD 573
D ++AVGVNC P +EQ + P VVYPNSGE +D
Sbjct: 216 DSVLAVGVNCCDPEEAQGAVEQAVAVTGRPAVVYPNSGEGWD 257
>gi|406605911|emb|CCH42688.1| Homocysteine S-methyltransferase 2 [Wickerhamomyces ciferrii]
Length = 301
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 172/404 (42%), Gaps = 135/404 (33%)
Query: 11 FSSQLSTYVGDIIDG------------HPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
S+LS+ V ++DG H LWS++ + T+ + H+ +I+ GA ++ T
Sbjct: 3 LKSRLSSKVPIVLDGALGTLLPEEAQSHSLWSTHTVITSPSIIQNIHQQYIENGAQLIQT 62
Query: 59 NSYQASIGGFMEF-LDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
++YQ+S ++ ++DY+ Q++ S+D +A
Sbjct: 63 STYQSSDHPSLQTEFNIDYE---QVLLKSIDLADQA------------------------ 95
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
RGD +D+ I GS+GPYGASL +G+E
Sbjct: 96 --------------RGD---------------------RKDVWIVGSIGPYGASLANGAE 120
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREWPHQKA 236
Y GDY + + + + E+H+ R++ L + D++ +ET+P E ++L L++ + +
Sbjct: 121 YTGDYGD-IKSSNLVEFHKERLEMLCKDNRVDLIGLETMPNINEIKILIELMQGY-DKDY 178
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS-SLIEQLKTENIP 295
+LS S D +++G + + + NP +L+A+GVNC+ PL S + + +L+
Sbjct: 179 YLSLSINGDT-LADGTKVESL-KELVDGNP-KLLAIGVNCL-PLKESLTWLNELQILGKD 234
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
L+VYPNSGE
Sbjct: 235 LIVYPNSGE--------------------------------------------------V 244
Query: 356 YDAVNARWIDR-DLCEPVDKYVTDWLD-EGVALVGGCCRTYAED 397
YDAVN +W + + ++YV + + V ++GGCCRT D
Sbjct: 245 YDAVNKKWNNHPNGTLTWNEYVQELQKLKNVKIIGGCCRTTPND 288
>gi|359148099|ref|ZP_09181330.1| homocysteine methyltransferase, partial [Streptomyces sp. S4]
Length = 202
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 152 TDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILA 211
D A + +A S GPYGA L DGSEYRG Y V+E + +HRPR++ L AG D+LA
Sbjct: 4 ADGVAGPLWVAASAGPYGAMLADGSEYRGRYGLSVAE--LERFHRPRLEVLAAAGPDVLA 61
Query: 212 IETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA 271
+ET+P + EA+ L R +R AWLS+S + + + +++A
Sbjct: 62 LETVPDADEARALLRAVRGL-GVPAWLSYSVAGGRTRAGDRLADA---FALAADAPEVVA 117
Query: 272 VGVNCVRPLMVSSLIE-QLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPN 330
VGVNC P V + + P+V YPNSGE A AQ L L EW
Sbjct: 118 VGVNCCDPREVEPAVRLAARVTGKPVVAYPNSGERWDAAARA-WRGPAQPLAGLAGEWVA 176
Query: 331 QKAWLSFSC 339
A L C
Sbjct: 177 AGARLVGGC 185
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 58/146 (39%), Gaps = 48/146 (32%)
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------- 338
L V +G +LA+ET+P + EA+ L R +R AWLS+S
Sbjct: 49 LEVLAAAGPDVLALETVPDADEARALLRAVRGL-GVPAWLSYSVAGGRTRAGDRLADAFA 107
Query: 339 ----------------------------CKTENIPLVVYPNSGERYDAVNARWIDRDLCE 370
+ P+V YPNSGER+DA W R +
Sbjct: 108 LAADAPEVVAVGVNCCDPREVEPAVRLAARVTGKPVVAYPNSGERWDAAARAW--RGPAQ 165
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAE 396
P+ +W+ G LVGGCCR A+
Sbjct: 166 PLAGLAGEWVAAGARLVGGCCRVGAQ 191
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIE-QLKTENIPLVVYPNSGERYD 573
+++AVGVNC P V P + + P+V YPNSGER+D
Sbjct: 114 EVVAVGVNCCDPREVEPAVRLAARVTGKPVVAYPNSGERWD 154
>gi|418577024|ref|ZP_13141156.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324689|gb|EHY91835.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 301
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 161/404 (39%), Gaps = 121/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L + LWSS L + Q H+ F GADI++T++YQ
Sbjct: 14 VLDGGLATTLEQAGCSL--KTSLWSSEVLKNNPTQIKQAHQAFTDVGADILLTSTYQ--- 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+SYQ I ++AT
Sbjct: 69 ------------ASYQTFSD--------IGMKATEI------------------------ 84
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ V + EAT TD +I GS+GPYGA L DGSEY G Y
Sbjct: 85 ---DQLYNTAVNQIMEAT--------TDTQ----VIVGSLGPYGAYLSDGSEYTGAY--D 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR-LLREWPHQKAWLSFSCKD 244
+S+ ++H+ RI+ALV+ G + ET+P +E + + ++ + +Q WLS + +
Sbjct: 128 LSKEDYFQFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNE 187
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP--LVVYPNS 302
D +S+ F ++ +++ G+NC ++ I + +N+P + +YPN
Sbjct: 188 DGDLSDDTEFEKLCAYI-KQYAERIPVFGINCSSVAGINKAISK-GLKNVPQTIALYPNG 245
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G A+E +EW + N L+V
Sbjct: 246 GAQYNAVE---------------KEWES----------VGNQGLIV-------------- 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ + DWLD+GV ++GGCC+T E+ +K ++
Sbjct: 267 -----------EQIPDWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 507
+ DWLD+GV ++GGCC+T E+ +K ++
Sbjct: 269 IPDWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
>gi|375152036|gb|AFA36476.1| homocysteine S-methyltransferase-3, partial [Lolium perenne]
Length = 191
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 56/233 (24%)
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWL 238
GDY E + + ++HR R+Q L EA D++A ETIP EAQ LL E +W
Sbjct: 2 GDYGEAGTLEFLKDFHRRRLQVLAEARPDLIAFETIPNKLEAQAYVELLEECNISIPSWF 61
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLV 297
SF+ KD H+ +G+S + A+ + ++ A+G+NC P + SLI + K + P++
Sbjct: 62 SFNSKDGVHVVSGDSLIECAKVANSCA--KVGAIGINCTPPRFIHSLILTIRKVTDKPIL 119
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
+YPNSGE RYD
Sbjct: 120 IYPNSGE--------------------------------------------------RYD 129
Query: 358 AVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
A W++ D YV++W +G AL+GGCCRT + L+ +
Sbjct: 130 AEKKEWVESTGVSDGDFVSYVSEWCKDGAALIGGCCRTTPNTIRAITRTLNQF 182
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 506 LDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVV 564
+ D H+ +G+S + A+ + ++ A+G+NC P + LI + K + P+++
Sbjct: 63 FNSKDGVHVVSGDSLIECAKVANSCA--KVGAIGINCTPPRFIHSLILTIRKVTDKPILI 120
Query: 565 YPNSGERYD 573
YPNSGERYD
Sbjct: 121 YPNSGERYD 129
>gi|358054030|dbj|GAA99829.1| hypothetical protein E5Q_06532 [Mixia osmundae IAM 14324]
Length = 352
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 168/416 (40%), Gaps = 121/416 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAK--DAVVQTHRDFIKAGADIVMTNSYQA 63
L+DGG S+ L +G D HPLWSS+ L+ AK + + H+ F AG+DI+ TN+YQ
Sbjct: 17 LLDGGMSTTLEDELGASTD-HPLWSSHLLSDAKGRQQIQKVHQMFHDAGSDIIQTNTYQ- 74
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+D + L S+ + V AIAL AR P L+A S+GPYGA
Sbjct: 75 --------MDESLCEANGL--SATELVSNAIAL----ARSVKGSP----LVALSLGPYGA 116
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
GSEY G Y G GP+ +SL D +
Sbjct: 117 LTSPGSEYSGHYT--------------------------GPYGPFESSLPDSRVDPSSTL 150
Query: 184 EHVSEA-----TMAEWHRPRIQA-LVEAGADILAIETIPASKEAQMLCRLLR----EWPH 233
S+A + ++H R++ L D+LA ET+P E + + R +R E P+
Sbjct: 151 PPASDAECYEDALTDFHTKRLRTFLASEKPDLLAFETVPLLTEVRAIRRAVRLCQTELPY 210
Query: 234 QKAWLSFS-----CKDDKHIS-NGESFTQVARTCYNMNPDQ-LIAVGVNCVRP-LMVSSL 285
W+SF C H + + + T A T + +Q +A+G+NC P L+ S++
Sbjct: 211 ---WISFVLPDGICPQSTHPTIDAKRCTLEALTLAALQGEQPPVAIGINCTHPSLIASNV 267
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
I +T + H L+I WL
Sbjct: 268 IRMARTVS----------SHKLSIP-----------------------WL---------- 284
Query: 346 LVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVA--------LVGGCCRT 393
V+YP+ G YD V W R+ + + LD ++GGCC++
Sbjct: 285 -VLYPDGGLTYDTVTKSWHAREAQQSDRSWADALLDAASTGDRAFAGYILGGCCKS 339
>gi|452090882|gb|AGF95111.1| homocysteine S-methyltransferase, partial [Prunus persica]
Length = 200
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 57/227 (25%)
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW 231
L DGSEY G+Y + V+ T+ ++H R+ L +GAD++A ET P + +A+ LL E
Sbjct: 2 LADGSEYSGNYGDAVTVETLKDFHTERVPILANSGADLIAFETTPNNIKAKAYAELLEEE 61
Query: 232 PHQ-KAWLSFSCKDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
AW SF+ KD ++ +G+S T +A +C Q++AVG+NC P + L+
Sbjct: 62 GIDIPAWFSFTSKDGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHGLVS 116
Query: 288 QL-KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
+ K + P+V+YPNSGE L ++W
Sbjct: 117 LIRKVTSKPIVIYPNSGETYDG---------------LTKQW------------------ 143
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+SGE +D + D + W + G +L GGCCRT
Sbjct: 144 --VQSSGE---------VDEEF---ADIVIGKWREAGASLFGGCCRT 176
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVY 565
D ++ +G+S T +A +C Q++AVG+NC P + L+ + K + P+V+Y
Sbjct: 75 DGINVVSGDSISECTSIADSC-----KQVVAVGINCTPPRFIHGLVSLIRKVTSKPIVIY 129
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 130 PNSGETYD 137
>gi|388502578|gb|AFK39355.1| unknown [Medicago truncatula]
Length = 218
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 60/235 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDA--VVQTHRDFIKAGADIVMTNSYQA 63
+IDGG +++L + D+ D PLWS+ L + + + Q H D+++ GADI+ T SYQA
Sbjct: 18 IIDGGLATELERHGADLND--PLWSAKCLISIPQSHLIRQVHLDYLENGADIITTASYQA 75
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL-----EATHARIRSDD---PARDILIA 115
+I GF E + S +++ SV+ EA L A + +DD R ILIA
Sbjct: 76 TIQGFKE-KGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDRILKQRPILIA 134
Query: 116 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
SVG YGA L DGSEY G+Y + ++ T+ ++H
Sbjct: 135 ASVGSYGAYLADGSEYSGNYGDAITLKTLKDFH--------------------------- 167
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE 230
R R+Q L +A AD+LA ETIP EA LL E
Sbjct: 168 --------------------RRRVQVLADASADLLAFETIPNKIEAHAFAELLEE 202
>gi|254386251|ref|ZP_05001561.1| homocysteine methyltransferase [Streptomyces sp. Mg1]
gi|194345106|gb|EDX26072.1| homocysteine methyltransferase [Streptomyces sp. Mg1]
Length = 291
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPA 217
++ +A SVGPYGA L DGSEYRG Y V E +A +HRPR AL+ AG D+LA+ETIP
Sbjct: 99 EVWVAASVGPYGAVLADGSEYRGRYGLGVRE--LAAFHRPRALALLAAGPDVLALETIPD 156
Query: 218 SKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277
+ EA+ L +L E AWLS++ + + A + Q+IAVGVNC
Sbjct: 157 TVEAEALLGILAE-TGAPAWLSYTVAGGRTRAGQPLAEAFALAAAS---PQVIAVGVNCC 212
Query: 278 RPL-MVSSLIEQLKTENIPLVVYPNSG 303
P ++ +L +PL+ YPN G
Sbjct: 213 DPEDVLPALEAAAGVTGMPLLAYPNDG 239
>gi|149920658|ref|ZP_01909123.1| homocysteine methyltransferase [Plesiocystis pacifica SIR-1]
gi|149818445|gb|EDM77894.1| homocysteine methyltransferase [Plesiocystis pacifica SIR-1]
Length = 325
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 147/350 (42%), Gaps = 76/350 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L D+ D PLWS+ L +A+ HR + AGADI+ T SYQAS+
Sbjct: 22 VLDGGLATSLEACGCDLDD--PLWSARLLLDDPEALRTVHRRWRDAGADILATASYQASL 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + L + L++ SV + A A EA R LIA SVG YGA L
Sbjct: 80 PG-LRAKGLSEARAKALLRESVTLTRAA-ADEANAPR---------PLIAASVGSYGAYL 128
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEYRG Y +S +A++H
Sbjct: 129 ADGSEYRGGY--GLSVEALADFH------------------------------------- 149
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ------KAWLS 239
RPR+ L AG D++A ET P + E L LL E + +AW+S
Sbjct: 150 ----------RPRLLELAAAGPDLIAFETFPDAVELAALAELLTELLTELGDTLPRAWIS 199
Query: 240 FSCKDDK-----HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-EN 293
S +++G T+ A +P ++ A+GVNCV P V+ +E L +
Sbjct: 200 ASLSPPGPDRSVRLADGTPLTK-ALAPLTDHP-KVAALGVNCVGPREVAPALEVLAACTD 257
Query: 294 IPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN 343
PLV YPNSGE + A+ E L W A L C N
Sbjct: 258 RPLVAYPNSGERWIDRGWSGAALEPNKFAALAERWFELGARLIGGCCRTN 307
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 141/333 (42%), Gaps = 91/333 (27%)
Query: 95 ALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAE---WHRLI 151
AL H R R D DIL S Y ASL G +G E ++A + E R
Sbjct: 54 ALRTVHRRWR--DAGADILATAS---YQASL-PGLRAKG-LSEARAKALLRESVTLTRAA 106
Query: 152 TDDP-ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADIL 210
D+ A LIA SVG YGA L DGSEYRG Y +S +A++HRPR+ L AG D++
Sbjct: 107 ADEANAPRPLIAASVGSYGAYLADGSEYRGGY--GLSVEALADFHRPRLLELAAAGPDLI 164
Query: 211 AIETIPASKEAQMLCRLLREWPHQ------KAWLSFSCKDDK-----HISNGESFTQVAR 259
A ET P + E L LL E + +AW+S S +++G T+ A
Sbjct: 165 AFETFPDAVELAALAELLTELLTELGDTLPRAWISASLSPPGPDRSVRLADGTPLTK-AL 223
Query: 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQ 319
+P ++ A+GVNCV P V+ +E L
Sbjct: 224 APLTDHP-KVAALGVNCVGPREVAPALEVLA----------------------------- 253
Query: 320 MLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRD----LCEPVDKY 375
+C + PLV YPNSGER WIDR EP +K+
Sbjct: 254 ------------------ACT--DRPLVAYPNSGER-------WIDRGWSGAALEP-NKF 285
Query: 376 VT---DWLDEGVALVGGCCRT-YAEDTLHMKHR 404
W + G L+GGCCRT YA +K R
Sbjct: 286 AALAERWFELGARLIGGCCRTNYAHIQALVKLR 318
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERY 572
++ A+GVNCV P V+P +E L + PLV YPNSGER+
Sbjct: 231 KVAALGVNCVGPREVAPALEVLAACTDRPLVAYPNSGERW 270
>gi|149247440|ref|XP_001528132.1| hypothetical protein LELG_00652 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448086|gb|EDK42474.1| hypothetical protein LELG_00652 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 326
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 15 LSTYVGDIID--------GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
L T + D+ID PLWS L A + + + H +I AG++++ T++YQ S
Sbjct: 16 LGTALEDLIDPSAPYLPSKSPLWSGQVLLDAPELIQKVHEMYIGAGSEVIFTSTYQLSYD 75
Query: 67 GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLR 126
+ L + ++ + S+D V+ A + D+ AR
Sbjct: 76 SLRKHTTLSDEQILEVWQRSIDLVRAA--------ALSIDETAR--------------YT 113
Query: 127 DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHV 186
E RG+ P + + IAGS+GPY A L +GSEY GDY +V
Sbjct: 114 KEKESRGE--------------------PGK-VHIAGSIGPYAAYLANGSEYTGDY-GNV 151
Query: 187 SEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLREWPHQKAWL-SFSCKD 244
++ + +H P ++ E A D++A ETIP +E + + +L++ +K L S +C++
Sbjct: 152 TDEQLEAFHTPMLEFFTENEAVDLIAFETIPNFQELKAVTKLVKRLNCKKPVLFSITCQN 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
++++G +V + P + +G+NCV +V ++ VYPN G
Sbjct: 212 LDNLTDGTPLLEVKKYLDFCLPKEQKILGINCVEYTLVQGIMSHFA--GFKFYVYPNLG 268
>gi|73663481|ref|YP_302262.1| homocysteine methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495996|dbj|BAE19317.1| putative homocysteine S-methyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 301
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 160/404 (39%), Gaps = 121/404 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++ L + LWSS L + Q H+ F GADI++T++YQ
Sbjct: 14 VLDGGLATTLEQAGCSL--KTSLWSSEVLKNNPTQIKQAHQAFTDVGADILLTSTYQ--- 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+SYQ I ++AT
Sbjct: 69 ------------ASYQTFSD--------IGMKATEI------------------------ 84
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ V + EAT TD +I GS+GPYGA L DGSEY G Y
Sbjct: 85 ---DQLYNTAVNQIMEAT--------TDTQ----VIVGSLGPYGAYLSDGSEYTGAY--D 127
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR-LLREWPHQKAWLSFSCKD 244
+S+ ++H+ RI+ALV+ G + ET+P +E + + ++ + +Q WLS + +
Sbjct: 128 LSKEDYFQFHKTRIEALVKRGINDFVFETVPNFEEIKAIVEYIVPHYTNQTFWLSVTVNE 187
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP--LVVYPNS 302
D +S+ F ++ +++ G+NC ++ I + +N+P + +YPN
Sbjct: 188 DGDLSDDTEFEKLCAYI-KQYAERIPVFGINCSSVAGINKAISK-GLKNVPQTIALYPNG 245
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G A+E +EW + N L+V
Sbjct: 246 GAQYNAVE---------------KEWES----------VGNQGLIV-------------- 266
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
+ + WLD+GV ++GGCC+T E+ +K ++
Sbjct: 267 -----------EQIPGWLDQGVKIIGGCCQTTPENIKSIKEAIE 299
>gi|254390558|ref|ZP_05005773.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294815640|ref|ZP_06774283.1| Homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|326443989|ref|ZP_08218723.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|197704260|gb|EDY50072.1| homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294328239|gb|EFG09882.1| Homocysteine methyltransferase [Streptomyces clavuligerus ATCC
27064]
Length = 306
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 130/307 (42%), Gaps = 74/307 (24%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG S+QL+ D+ D PLW++ L + + H + AGA ++++ SY
Sbjct: 13 AGPLVLDGGLSNQLAAQGCDLSD--PLWTARLLKDGPEQLAAAHTAYADAGAQVLISASY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QAS GF L S L+ SV+ + A ++ +A SVGPY
Sbjct: 71 QASHEGFRR-AGLGGAESSALLARSVELARAAADAAPA-----------EVWVAASVGPY 118
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA L DGSEYRG Y V E
Sbjct: 119 GAVLADGSEYRGRYGLTVRE---------------------------------------- 138
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
+ +HRPRI+AL AG D+LA+ET+P + EA+ L + WLS++
Sbjct: 139 ---------LERFHRPRIEALAAAGPDVLALETVPDTDEAKALLAAAADC-GVPVWLSYT 188
Query: 242 CKDDKHISN---GESFTQVARTCYNMNPDQLIAVGVNCVRPL-MVSSLIEQLKTENIPLV 297
D+ + ++F A +Q+IA GVNC P ++ P+V
Sbjct: 189 ADGDRTRAGQPLADAFALAAEH------EQVIATGVNCCAPRDAAPAVARAASVTGRPVV 242
Query: 298 VYPNSGE 304
VYPNSGE
Sbjct: 243 VYPNSGE 249
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR 392
P+VVYPNSGE +D W +P W+ G L+GGCCR
Sbjct: 240 PVVVYPNSGEDWDPAAHTWRGPVRYDPAQ--APAWVTAGARLIGGCCR 285
>gi|307193330|gb|EFN76192.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 346
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 57/314 (18%)
Query: 1 MANVKLIDGGFSSQL---STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVM 57
M + ++DG F +QL S + ++ L + + +V+QTH DF++AGA ++
Sbjct: 1 MNQLLVLDGDFEAQLLRRSKHANEVGKSFML---QVITSEPYSVLQTHMDFLRAGAQLIR 57
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIA--LEATHARIRSDDPARDILIA 115
TN+++ S G ++LD ++ +V+ K+AI L H +
Sbjct: 58 TNTHRISTGSIGTHMNLDSTEVKPMVDMAVNLAKKAIMKYLHEVHDQ------------K 105
Query: 116 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
SV Y S R ++AG G Y A+L D
Sbjct: 106 TSVEQYNFSSRP--------------------------------ILAGCCGSYNATLFDN 133
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235
E +S ++ +H+ R+Q L+ A D+L E+IP +E + +L+ P +
Sbjct: 134 VFDTWKLTESLSLNYLSWFHQQRMQVLLNANVDLLTFESIPTLREVDAIITVLKLHPTAR 193
Query: 236 AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGV---NCVR--PLMVSSLIEQLK 290
A ++F C ++ + +G +F VA CYN +Q+ A+G N + L V I +
Sbjct: 194 ALITFLCTENGKLLDGSNFADVAVHCYNSLTNQIFAIGTEANNAIADWTLQVMKNINYNR 253
Query: 291 TENIPLVVYPNSGE 304
+ IP V+Y + +
Sbjct: 254 EDKIPFVLYVSQSQ 267
>gi|227893522|ref|ZP_04011327.1| homocysteine methyltransferase [Lactobacillus ultunensis DSM 16047]
gi|227864692|gb|EEJ72113.1| homocysteine methyltransferase [Lactobacillus ultunensis DSM 16047]
Length = 328
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 153/390 (39%), Gaps = 116/390 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG S+ L I + LW++ L D V H D+ KAGA + +T++YQA+
Sbjct: 13 ILDGAMSTALEKQ--GIDTNNDLWTAIALEKDLDKV---HMDYFKAGAQMTITDTYQAN- 66
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
++A +++ A D++ ++
Sbjct: 67 ------------------------------VQAFKKHGYTEEQAEDMI--------AKAV 88
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ R DY + H + A SVG YGA L G E+RGDY
Sbjct: 89 EIAKQARDDYEKKTG------IHNFV----------AASVGSYGAYLARGDEFRGDY--K 130
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSCKD 244
++ +H PR++ L++ D LAIET P +E + L+ P ++SF+ D
Sbjct: 131 LTSKQYLNFHLPRLKVLLKNKPDCLAIETQPKLEEVVAILDWLKANSPQIPVYVSFTLHD 190
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
IS+G Q + N Q+ AVG NC +P + ++ I+++K +++YPN G
Sbjct: 191 TTKISDGTPLKQAMQKLNEYN--QVFAVGANCFKPFLATAAIDKMKEFTKKAIIIYPNLG 248
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ E+ Q+ W+ F NA++
Sbjct: 249 -------------------GVYDEF--QRNWIPF----------------------NAKF 265
Query: 364 IDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R L + +W + G ++GGCC T
Sbjct: 266 DFRKLSQ-------EWYEHGARIIGGCCST 288
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLI 536
+ DWL + Y TLH D IS+G Q + N Q+
Sbjct: 169 ILDWLKANSPQIP----VYVSFTLH--------DTTKISDGTPLKQAMQKLNEYN--QVF 214
Query: 537 AVGVNCVRPLMVSPLIEQLKT-ENIPLVVYPNSGERYD 573
AVG NC +P + + I+++K +++YPN G YD
Sbjct: 215 AVGANCFKPFLATAAIDKMKEFTKKAIIIYPNLGGVYD 252
>gi|414868889|tpg|DAA47446.1| TPA: hypothetical protein ZEAMMB73_192064 [Zea mays]
Length = 249
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 50/218 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ EA + +S +L+A S+G YGA L
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTPIQHPVLVAASLGSYGAYL 141
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY GDY E ++ + ++HR
Sbjct: 142 ADGSEYSGDYGEAGTKEFLKDFHR------------------------------------ 165
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQM 223
R+Q L EAG D++A ETIP EA++
Sbjct: 166 -----------RRLQVLAEAGPDLIAFETIPNKLEAEV 192
>gi|402586382|gb|EJW80320.1| hypothetical protein WUBG_08773 [Wuchereria bancrofti]
Length = 208
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 57/236 (24%)
Query: 22 IIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQ 81
++ + LWS L D ++Q H+ FI+AG+DI++TNSYQA I M + +++
Sbjct: 1 MLQNNSLWSCAALFDNPDLILQVHKRFIEAGSDIILTNSYQACINTMMSSRGMTKNAAES 60
Query: 82 LIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 141
+K V ++AI + +++ I GSVGPYG DGSEY G YV+ + +
Sbjct: 61 SLKKLVSLAEQAINECSVREKVK---------IVGSVGPYGVIFNDGSEYNGYYVDEIEQ 111
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA 201
+ ++H +
Sbjct: 112 QVLVDYH-----------------------------------------------MQQTIP 124
Query: 202 LVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQ 256
L++AG ++A ET+P+ KEA + + + W+SFSCK+ K ++ E F +
Sbjct: 125 LLQAGLKVIAYETVPSYKEALAILKAADAIGYSYNFWISFSCKNGKQTNHNEDFCK 180
>gi|320583897|gb|EFW98110.1| S-adenosylmethionine-homocysteine methyltransferase [Ogataea
parapolymorpha DL-1]
Length = 301
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 53/253 (20%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAG-ADILAIETIPA 217
+ IAGS+GPYGA L DGSEY G+Y V++A + +H R + L ++ D+LA ETIP+
Sbjct: 94 VKIAGSIGPYGAYLADGSEYTGNY-GSVTDAQLRAFHEGRFRFLAQSSDVDVLAFETIPS 152
Query: 218 SKEAQMLCRLLREWPHQKAW-LSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
+E ++L L R +K W LS S ++ + +G QV + ++AVGVNC
Sbjct: 153 FQEIRVLAELAR--TQEKPWYLSLSVRETALV-DGTPLAQVVSWLDSHYDRNIVAVGVNC 209
Query: 277 VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLS 336
+ ++E+L LS
Sbjct: 210 CGVRVALPVVEELDRR------------------------------------------LS 227
Query: 337 FSCKTENIPLVVYPNSGERYDAVNARWIDR--DLCEPVDKYVTDWLDEGVALVGGCCRTY 394
S N +V+YPNSGE YD +W E V + + + V +VGGCCRT
Sbjct: 228 DSQNLRNARIVLYPNSGEVYDGTTKKWSGEPSHFVEAVKQCLQ---YKRVGIVGGCCRTG 284
Query: 395 AEDTLHMKHRLDD 407
D ++ +D+
Sbjct: 285 PADIRQLRTLIDE 297
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 138/309 (44%), Gaps = 76/309 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG ++L D+ G LWS + + D V H D++++GA+IV+T +YQ
Sbjct: 3 LLDGALGTELEKRGVDVSGG--LWSGRAVLDSADTVKAIHLDYMRSGANIVLTATYQ--- 57
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
D + + ++Q Y + A+ L A AR +D A + IAGS+GPYGA L
Sbjct: 58 -----LCDANIEQNHQ--DPHAVYTR-AVGLCA-QARREYEDGA-GVKIAGSIGPYGAYL 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DGSEY G+Y GSV
Sbjct: 108 ADGSEYTGNY---------------------------GSV-------------------- 120
Query: 186 VSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREWPHQKAW-LSFSCK 243
++A + +H R + L ++ D+LA ETIP+ +E ++L L R +K W LS S +
Sbjct: 121 -TDAQLRAFHEGRFRFLAQSSDVDVLAFETIPSFQEIRVLAELAR--TQEKPWYLSLSVR 177
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL--------KTENIP 295
+ + +G QV + ++AVGVNC + ++E+L N
Sbjct: 178 ETALV-DGTPLAQVVSWLDSHYDRNIVAVGVNCCGVRVALPVVEELDRRLSDSQNLRNAR 236
Query: 296 LVVYPNSGE 304
+V+YPNSGE
Sbjct: 237 IVLYPNSGE 245
>gi|342179836|emb|CCC89310.1| putative homocysteine S-methyltransferase [Trypanosoma congolense
IL3000]
Length = 432
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 76/351 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG +++ D++ P+WS+ + T AV H ++ AGADI++T++YQ
Sbjct: 24 NFFVLDGAMGTEIEERRPDLLPLGPMWSASVVHTEPSAVQSVHEAYVNAGADILLTSTYQ 83
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ G D L+ ++V ++ +I E T A ++ A+ + SV G
Sbjct: 84 INTKGCATLGVAIPD----LVDAAVRLLRNSITPERTSATEQAKAKAK---LDPSVKRRG 136
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR-DILIAGSVGPYGASLRDGSEYRGD 181
AS A A I DDP++ +LI GS+ PYG+ G EY G
Sbjct: 137 AS-----------------AVFAPLLYGIRDDPSKCPVLIGGSMSPYGSLAGYGQEYHGK 179
Query: 182 YVEHVSEATMAEWHRPRIQALVE-------AGADILAIETIPASKEAQMLCRLLREWPHQ 234
Y V E + E++ R++A ++ D L +ET P KEA + L HQ
Sbjct: 180 YT--VDETIIDEFYNQRVRAFIDYTSDTPRPKVDFLMLETFPLLKEAVGVFSWLS---HQ 234
Query: 235 K--------AWLSF-----------------------SCKDDKHISNGESFTQVARTCYN 263
+ +SF S + H+ +G ++ QV T
Sbjct: 235 RDGVLDTAPVCISFVSVLDGDRPSADADDAAVEEWWNSAESSIHLPDGNTYLQVLDTLME 294
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIE--------QLKTENIPLVVYPNSGEHI 306
+ QL +G NC PL VS + ++ ++ L++Y NSGE
Sbjct: 295 LRSPQLAGLGANCCSPLEVSVVASLLLKKKKKHVEDPSLVLLLYSNSGEEF 345
>gi|326432000|gb|EGD77570.1| homocysteine methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 460
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASK 219
L+A S+GPYGA L DGSEYRG Y +A++H + L A D+LA ETIP +
Sbjct: 207 LVAASIGPYGAFLADGSEYRGGY----DAERLAQFHHEKALILWRARPDVLAFETIPQAS 262
Query: 220 EAQMLCRLLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQ----LIAVGV 274
EA + +++E P WLSF C D +++G+ T + +Q LI +GV
Sbjct: 263 EALAIVGMMQETLPEAPYWLSFQCCDAHRLASGDDVTAAVASLVTAFDEQRAGSLIGIGV 322
Query: 275 NCVRPLMVSSLIEQLK----TENIPLVVYPNSGE 304
NC+ P + + L+ + + ++ YPN GE
Sbjct: 323 NCISPAIAAPLVTAIARCVGRRRLHVLCYPNKGE 356
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 30 SSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDY 89
S F T AV+ HR F++AGADI+ T SYQ ++ GF + L + + I SV
Sbjct: 68 SHVFSDTNHRAVIDAHRAFLEAGADILTTVSYQGTVAGFKRDMGLSEEEASHAIALSVTL 127
Query: 90 VKEAI 94
+ AI
Sbjct: 128 ARTAI 132
>gi|307193331|gb|EFN76193.1| Homocysteine S-methyltransferase 2 [Harpegnathos saltator]
Length = 343
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 163/421 (38%), Gaps = 116/421 (27%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M N+ ++DG +QL + + + + Y + K+ V++T+ DF++AGA I+ TN+
Sbjct: 1 MENLMVLDGDSEAQLYQRLKPSKELEKIIALYAVEYHKEEVIETYLDFLRAGAQIIRTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPAR-------DI 112
Y+ S ++ + Y +L++ SV + A+ R DP +I
Sbjct: 61 YRLSDYTIEKYFKPESSQFYTELMEKSVKLARAAVTKYLEEKR---KDPKYSELFDRCEI 117
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
L+AG G +++ V Y +L
Sbjct: 118 LVAGCCGSS--------------------------------------VVSECVDKYELTL 139
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP 232
+D ++ + H R+ LV+ G DIL E+IP+ E ++ +++
Sbjct: 140 KDT---------QIAAQLIYFHHNDRVIELVKYGVDILTFESIPSLVETDIIISIMKRHH 190
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292
+ W++F C+ D + +G + VA CY+ Q+IA+G C P ++ S+
Sbjct: 191 PIRGWITFLCRADGKLLDGNTLETVAMRCYDALGHQIIAIGAECPVPDVMKSI------- 243
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
+L I + S E Q +P V+Y +
Sbjct: 244 -------------VLDIGILKLSHEVQ------------------------VPFVLYIDK 266
Query: 353 -----GERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
E +A N+ D YV +WLD G+ +GG T ED ++ ++DD
Sbjct: 267 VHLPITENKEASNSLMSD---------YVDEWLDHGIRYIGGGINTRPEDVALIRKQVDD 317
Query: 408 W 408
+
Sbjct: 318 Y 318
>gi|302537497|ref|ZP_07289839.1| predicted protein [Streptomyces sp. C]
gi|302446392|gb|EFL18208.1| predicted protein [Streptomyces sp. C]
Length = 288
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+A SVGPYGA L DGSEYRG Y ++EA + +HRPRI AL+ AG D+LA+ET+P E
Sbjct: 100 VAASVGPYGALLADGSEYRGRY--GLTEAELVAFHRPRIGALLAAGPDLLALETVPDVLE 157
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280
A+ L R+L +AWL+++ + + A ++IAVGVNC P
Sbjct: 158 ARALLRVL-AGTGARAWLTYTVAGGRTRAGQPLAEAFALAAAAP---EVIAVGVNCCDPA 213
Query: 281 -MVSSLIEQLKTENIPLVVYPNSGE 304
++ +L PLV YPN G
Sbjct: 214 EVLPALAAAASVTAKPLVAYPNDGS 238
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 48/149 (32%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS----------------------- 338
+G +LA+ET+P EA+ L R+L +AWL+++
Sbjct: 142 AGPDLLALETVPDVLEARALLRVL-AGTGARAWLTYTVAGGRTRAGQPLAEAFALAAAAP 200
Query: 339 ---------CKTENI-------------PLVVYPNSGERYDAVNARWIDRDLCEPVDKYV 376
C + PLV YPN G +DA W P V
Sbjct: 201 EVIAVGVNCCDPAEVLPALAAAASVTAKPLVAYPNDGSVWDAATGSW--NAPAAPAPWPV 258
Query: 377 TDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W G LVGGCCR + + RL
Sbjct: 259 EAWRAAGARLVGGCCRIGPDRIAALGPRL 287
>gi|343470395|emb|CCD16888.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 432
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 146/351 (41%), Gaps = 76/351 (21%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
N ++DG +++ D++ P+WS+ + AV H ++ AGADI++T++YQ
Sbjct: 24 NFFVLDGAMGTEIEERRPDLLPLGPMWSASVVHKEPSAVQSVHEAYVNAGADILLTSTYQ 83
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ G D L+ ++V ++ +I E T A ++ A+ + SV G
Sbjct: 84 INTKGCATLGVAIPD----LVDAAVRLLRNSITPERTSATEQAKAKAK---LDPSVKRRG 136
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR-DILIAGSVGPYGASLRDGSEYRGD 181
AS A A I DDP++ +LI GS+ PYG+ G EY G
Sbjct: 137 AS-----------------AVFAPLLYGIRDDPSKCPVLIGGSMSPYGSLAGYGQEYHGK 179
Query: 182 YVEHVSEATMAEWHRPRIQALVE-------AGADILAIETIPASKEAQMLCRLLREWPHQ 234
Y V E + E++ R++A ++ D L +ET P KEA + L HQ
Sbjct: 180 YT--VDETIIDEFYNQRVRAFIDYTSDTPRPKVDFLMLETFPLLKEAVGVFSWLS---HQ 234
Query: 235 K--------AWLSF-----------------------SCKDDKHISNGESFTQVARTCYN 263
+ +SF S + H+ +G ++ QV T
Sbjct: 235 RDGVLDTAPVCISFVSVLDGDRPSADADDAAVEEWWNSAESSIHLPDGNTYLQVLDTLME 294
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIE--------QLKTENIPLVVYPNSGEHI 306
+ QL +G NC PL VS + ++ ++ L++Y NSGE
Sbjct: 295 LRSPQLAGLGANCCSPLEVSVVASLLLKKKKKHVEDPSLVLLLYSNSGEEF 345
>gi|156337320|ref|XP_001619859.1| hypothetical protein NEMVEDRAFT_v1g223749 [Nematostella vectensis]
gi|156203827|gb|EDO27759.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239
GD +H + + +WHRP+IQALVE G D+LA ETIPA KE + L +LL+E+P KAWLS
Sbjct: 14 GDIYQH--KKNLMDWHRPQIQALVETGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLS 71
Query: 240 FSCKDDKHISNGESF 254
+SCKD H S+ E F
Sbjct: 72 YSCKDGSHTSHNEDF 86
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK-------TENIPLVVYPNSGE 354
+G +LA ETIPA KE + L +LL+E+P KAWLS+SCK E+ + +
Sbjct: 37 TGLDLLAFETIPAQKEGEALVQLLKEFPGTKAWLSYSCKDGSHTSHNEDFVSAIMAAVAD 96
Query: 355 RYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ V W D PV Y+ +W+D G +GGCCRT D
Sbjct: 97 S-EQVRYGWQDTGNVPPVVSYLDEWIDSGAQWIGGCCRTSLTD 138
>gi|403714913|ref|ZP_10940768.1| homocysteine S-methyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211117|dbj|GAB95451.1| homocysteine S-methyltransferase [Kineosphaera limosa NBRC 100340]
Length = 310
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 102/237 (43%), Gaps = 64/237 (27%)
Query: 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASK 219
+A SVGPYGA+L DGSEYRGDY +S A + WHRPR+Q L +AGAD+LA+ETIP+
Sbjct: 117 FVAASVGPYGAALADGSEYRGDY--GLSVAQLRAWHRPRLQVLADAGADVLALETIPSLA 174
Query: 220 EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCY--NMNPDQLIAVGVNCV 277
EA+ L + + AWLS + D + GE R Y + ++AVG NC
Sbjct: 175 EAEALLAEVAQL-GVPAWLSMTA-DGERTRLGEPL----REAYAMAADVANVVAVGANCY 228
Query: 278 RPLMVSSLIEQLK--TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
P ++ + +P VVYPNSGE
Sbjct: 229 APEQTGQVLAAVAAGAPELPPVVYPNSGE------------------------------- 257
Query: 336 SFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR 392
R+DA RW +W+ G LVGGCCR
Sbjct: 258 -------------------RWDASARRWTGAPTIG--AAAAREWVAGGARLVGGCCR 293
>gi|407916327|gb|EKG09701.1| Homocysteine S-methyltransferase [Macrophomina phaseolina MS6]
Length = 367
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
MA +K++DGG + L G + PLWSS+FL ++ D ++ +DF++AGAD+++T
Sbjct: 1 MATIKVLDGGLGTSLEDKYGVKFNHSQPLWSSHFLISSHDTLLACQKDFVEAGADVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVD-YVKEAIAL---EATHARIRSDDPARDILIA 115
+YQ S+ GF D+ + K S+ Y+ A+ + + H + + +A
Sbjct: 61 TYQLSVEGFARTRTQDFPDG--IPKGSITPYLAGAVEIAEKASAHGKAK---------VA 109
Query: 116 GSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
S+GPYGAS+ G EY G Y EH SE + +WH
Sbjct: 110 LSLGPYGASMIPGQEYSGKYDAEHDSEEGLYQWH 143
>gi|357588573|ref|ZP_09127239.1| homocysteine methyltransferase [Corynebacterium nuruki S6-4]
Length = 334
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 103/249 (41%), Gaps = 69/249 (27%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+A SVGPYGA +G+EY G Y V E +A+WHR RI L ++GAD+L ET+P+ +E
Sbjct: 122 VAASVGPYGAGPGEGTEYDGAYGLTVDE--LADWHRDRIGILADSGADVLLAETVPSVRE 179
Query: 221 AQMLCRLLREWPHQKAWLSFSC--------KDDKHISNGESFTQVARTCYNMNPDQLIAV 272
+ L R A LS + D +S+G ++VAR V
Sbjct: 180 IEALAREFTA-AGVDALLSVTVLPRTPGTLADGVTLSDGTELSEVARIVAETP--AFRTV 236
Query: 273 GVNCVRP----LMVSSLIEQLKTEN--IPLVVYPNSGE---HILAIETIPASKEAQMLCR 323
GVNCV V +L E L +PL VYPNSGE H+
Sbjct: 237 GVNCVSADAALAGVRALGEGLAEAGRPLPLSVYPNSGELWDHV----------------- 279
Query: 324 LLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEG 383
+ WL P + E +D V D+LD G
Sbjct: 280 -------NRCWL--------------PRTAESAGGATTSLLD---------AVPDFLDAG 309
Query: 384 VALVGGCCR 392
V L+GGCCR
Sbjct: 310 VRLIGGCCR 318
>gi|340794250|ref|YP_004759713.1| 5-methyltetrahydrofolate--homocysteine methyltransferase
[Corynebacterium variabile DSM 44702]
gi|340534160|gb|AEK36640.1| 5-methyltetrahydrofolate-homocysteinemethyltransferase
[Corynebacterium variabile DSM 44702]
Length = 325
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 104/250 (41%), Gaps = 75/250 (30%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+A SVGPYGA +G+EY G Y V E +A+WHR RI+ L AGAD+L ET+P+ +E
Sbjct: 118 VAASVGPYGAGPGEGTEYDGAYGLTVDE--LADWHRDRIRILASAGADVLIAETVPSVRE 175
Query: 221 AQMLCRLLREWPHQK--AWLSFSC--------KDDKHISNGESFTQVARTCYNMNPDQLI 270
+ L RE+ + A LS + D +S+G ++VAR
Sbjct: 176 IEALA---REFTAARVDALLSVTVLPRTPGTLADGVTLSDGTELSEVARIVAET--PAFR 230
Query: 271 AVGVNCVRPLMVSSLIEQLKT------ENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324
VGVNCV + + +L +PL VYPNSGE
Sbjct: 231 TVGVNCVSADAALAAVRELGAGLAAAGRPLPLSVYPNSGEL------------------- 271
Query: 325 LREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDR--DLCEPVDKYVTDWLDE 382
+D VN W+ R + + V D+LD
Sbjct: 272 -------------------------------WDHVNRCWLPRTAEGTTSLIDAVPDFLDA 300
Query: 383 GVALVGGCCR 392
GV L+GGCCR
Sbjct: 301 GVRLIGGCCR 310
>gi|388582815|gb|EIM23118.1| Homocysteine S-methyltransferase [Wallemia sebi CBS 633.66]
Length = 341
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 75/324 (23%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG ++QL TY D+ LWS+ L D V Q HRD+++AGADI+ T +
Sbjct: 1 MPELEILDGGGATQLETYNLDLTGS--LWSASALNDNPDLVEQMHRDYLEAGADIIETCT 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ S+ GF +++ ++ V AI TH + D + +A ++GP
Sbjct: 59 YQVSLEGFK-----TKEATSSAVQKGVQIANNAI---NTHNEV---DHSSQKQLAYALGP 107
Query: 121 YGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
+ + DG+EY G+Y V++ SL GS Y
Sbjct: 108 FAVATADGAEYTGEYSVDY--------------------------------SLSQGSLY- 134
Query: 180 GDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLREW-PHQKAW 237
+ ++H R++ L +A DIL ET+P E + + + E+ + K+
Sbjct: 135 --------SENLKQFHLGRLKVLNTQAKVDILLFETVPLLSEVRAIRAAVEEYRAYVKSS 186
Query: 238 LSF---------SCKDDKHISNGES-FTQVARTCYNMNPDQLIAVGVNCVRP----LMVS 283
+ S K +S G S + T + N ++ A+G+NC +P +VS
Sbjct: 187 VPLYISLVFPDGSLPGSKILSEGPSGIKDIIETIFGGNSAEVDAIGINCTKPHYLRRLVS 246
Query: 284 SLIEQLKTENI----PLVVYPNSG 303
+++ L + + L++YP+ G
Sbjct: 247 DIVDHLSSYELNRKPKLMIYPDGG 270
>gi|146423214|ref|XP_001487538.1| hypothetical protein PGUG_00915 [Meyerozyma guilliermondii ATCC
6260]
Length = 313
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 123/315 (39%), Gaps = 80/315 (25%)
Query: 6 LIDGGFSSQLSTYVGD---IIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++DGG QL T + PLWS L A D + H+ F++AG DIV T++YQ
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTTSTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
S ++ D +L SVD +A + AR + G++GPYG
Sbjct: 68 ISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKAR-----------VCGAIGPYG 116
Query: 123 ASLRDGSEYRGDY---VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
L + +EY G+Y H E + ++P DIL
Sbjct: 117 GFLANYAEYTGEYGLITNHKLEQYHLPLATFLNNNPKVDIL------------------- 157
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ----MLCRLLREWPHQK 235
A ETIP KE + ++C++ P +
Sbjct: 158 -------------------------------AFETIPNYKELKVIVNLVCKMSATGPLKP 186
Query: 236 AWLSFSCKDDKHISNGESFTQVA---RTCYNMN---PDQLIAVGVNCVRPLMVSSLIEQL 289
+LS + ++ +S+G ++ N N +LIA+G NC + +++ +
Sbjct: 187 FYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIGCNCTELKDATHVLKNI 246
Query: 290 KT---ENIPLVVYPN 301
+T NIP +VYPN
Sbjct: 247 ETYNYHNIPTIVYPN 261
>gi|190345013|gb|EDK36817.2| hypothetical protein PGUG_00915 [Meyerozyma guilliermondii ATCC
6260]
Length = 313
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 123/315 (39%), Gaps = 80/315 (25%)
Query: 6 LIDGGFSSQLSTYVGD---IIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++DGG QL T + PLWS L A D + H+ F++AG DIV T++YQ
Sbjct: 8 VLDGGLGIQLETLAEKRNFAVKNDPLWSGRALIEAPDLIEDVHKSFLEAGCDIVTTSTYQ 67
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
S ++ D +L SVD +A + AR + G++GPYG
Sbjct: 68 ISRASLKKYTDFTDAQIEELWAKSVDVCWQACKFHESKAR-----------VCGAIGPYG 116
Query: 123 ASLRDGSEYRGDY---VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
L + +EY G+Y H E + ++P DIL
Sbjct: 117 GFLANYAEYTGEYGLITNHKLEQYHLPLATFLNNNPKVDIL------------------- 157
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ----MLCRLLREWPHQK 235
A ETIP KE + ++C++ P +
Sbjct: 158 -------------------------------AFETIPNYKELKVIVNLVCKMSATGPLKP 186
Query: 236 AWLSFSCKDDKHISNGESFTQVA---RTCYNMN---PDQLIAVGVNCVRPLMVSSLIEQL 289
+LS + ++ +S+G ++ N N +LIA+G NC + +++ +
Sbjct: 187 FYLSMNFRNSSQMSDGTPIEKIMGYLNGKLNKNRTLRKRLIAIGCNCTELKDATHVLKNI 246
Query: 290 KT---ENIPLVVYPN 301
+T NIP +VYPN
Sbjct: 247 ETYNYHNIPTIVYPN 261
>gi|307193333|gb|EFN76195.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 339
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 131/307 (42%), Gaps = 56/307 (18%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH---PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+K IDG F +QL + + PL + T + A+ + H DF+ AGA I+ TN+
Sbjct: 8 IKTIDGDFVAQLCCNLKKQANFEAVDPLVDIRIIQTNRYAIYRVHLDFLHAGATIIRTNT 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
+ S EA ++I S+ R + +
Sbjct: 68 ARIS--------------------------------EAALSKINSNKSVRYFIKNAVLLA 95
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS-LRDGSEYR 179
A + E RGD + + + +R P IAG + S R G +
Sbjct: 96 RKAVCKYYKETRGD----MQSPEIYDRNR-----PQ----IAGYCTNFLKSCFRKGLPF- 141
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239
DY VS M + HR RI+ L++AG D+LAIE I E +++ +LR + K W+S
Sbjct: 142 -DYWNEVSREEMLKLHRLRIRELLKAGVDMLAIEDIHNMVELKIIVEVLRRYKSAKVWIS 200
Query: 240 FSCKDDKHISNGESFTQVARTC-YNMNPDQLIAVGVNCVRPLMVSSLIEQL----KTENI 294
F+C +D + +G + C +++ Q+IA+G C SL++ + + + I
Sbjct: 201 FTCLNDVELFDGSLLLDAIKHCRRSLHSGQIIAIGAKCWMDGKELSLLKDIYNATRKDRI 260
Query: 295 PLVVYPN 301
PL+ Y N
Sbjct: 261 PLIAYIN 267
>gi|344300595|gb|EGW30916.1| hypothetical protein SPAPADRAFT_62824 [Spathaspora passalidarum
NRRL Y-27907]
Length = 274
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 75/325 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +QL + I PLWS + + + + Q HR++I +GADI+ T +YQ S
Sbjct: 14 VMDGALGTQLEPF----IPKTPLWSGFAVLAKPEILAQVHREYIISGADIIATATYQLSQ 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
+ DL + +S+++ IALEA RD+L+ GS+GPY ASL
Sbjct: 70 NLLRQHTDLTDGQIEGIWESAIN-----IALEAID--------NRDVLVMGSIGPYSASL 116
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
G+EY +
Sbjct: 117 GSGAEYSNNI-------------------------------------------------D 127
Query: 186 VSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLREWPHQKA-WLSFSCK 243
VS + +H P Q + A D++ +ET+ +E + E+ H K ++S
Sbjct: 128 VSNEFLQAYHIPLFQYFSDNAKVDLIGLETVSTLQE----FVVFHEFNHTKPYYISIISN 183
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
D ++ +G S +++ + + + I +G+NC ++S ++E++ ++P+++ PN G
Sbjct: 184 DGDNLPDGTSLSELVSYIDSHSDEWFIGLGINCTEYTLISKMVERI---HLPVILNPNLG 240
Query: 304 EHILAIETIPASKEAQMLCRLLREW 328
+ P K R + W
Sbjct: 241 YIVEGDNARPKEKNDYEWIRGVTNW 265
>gi|339899403|ref|XP_001470006.2| putative homocysteine S-methyltransferase [Leishmania infantum
JPCM5]
gi|321398811|emb|CAM73127.2| putative homocysteine S-methyltransferase, partial [Leishmania
infantum JPCM5]
Length = 199
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 7/134 (5%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG +++L T D++D PLWS L + + +++AGA ++T SYQ
Sbjct: 69 QVVMLDGGLATELETRGCDLLD--PLWSGKVLLESPQRIRDVALAYLRAGARCIITASYQ 126
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ ME L D++ I+ SV IA ++ A + +AGSVGPYG
Sbjct: 127 ITPQSLMEHRGLTEDAAVAAIEESVR-----IAQSVRERHLKEKPQAAPVFVAGSVGPYG 181
Query: 123 ASLRDGSEYRGDYV 136
A L DGSEYRGDYV
Sbjct: 182 AYLADGSEYRGDYV 195
>gi|119499249|ref|XP_001266382.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
gi|119414546|gb|EAW24485.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
Length = 343
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
MA+++++DGG + L G D PLW+S+ L + ++ RDFI AG+DI++T
Sbjct: 1 MASIQILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRDFITAGSDILLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQ SI GF ++ + + ++ Y++ A+A+ A AR+ IA S+
Sbjct: 61 TYQVSIEGFARTKTPEFPDG--IPRPAIGKYLRTALAV-AEQARVCPSAAK----IALSL 113
Query: 119 GPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
GPYGA + G EY G Y EH SE T+ +WH
Sbjct: 114 GPYGACMIPGQEYSGKYDAEHDSEETLFQWH 144
>gi|50556936|ref|XP_505876.1| YALI0F25641p [Yarrowia lipolytica]
gi|49651746|emb|CAG78687.1| YALI0F25641p [Yarrowia lipolytica CLIB122]
Length = 348
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 161/406 (39%), Gaps = 129/406 (31%)
Query: 19 VGDIIDGHPLWSSYFLATAKD---AVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLD 75
V +D HP W L +++D + + H+D++ AGADIV + SYQAS+ G ++ +
Sbjct: 58 VNRALDEHPEW----LESSQDNSNLLYRIHKDYVVAGADIVTSASYQASLEGTIKAGAVQ 113
Query: 76 -YDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGD 134
+ + +++ S V++A+ T A+++
Sbjct: 114 RWPEALWMLRKSEQLVRKAV----TEAKVK------------------------------ 139
Query: 135 YVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 194
R +L+A SVGP+GA L G EY GDY + + +
Sbjct: 140 ----------------------RKVLLAASVGPFGAWLGGGQEYNGDYTGYTKD-DIRRH 176
Query: 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQK--AWLSFSCK----DDKH 247
H +I+A++ D+L IETIP+ E ++L +L P LS S K D
Sbjct: 177 HEFKIRAVLGGSPDMLLIETIPSIIEVEVLVDVLNTILPPSPIPVCLSLSVKSADYDRVA 236
Query: 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHIL 307
+++G + +A + +GVNC
Sbjct: 237 LADGSELSNIAELAASC--PSFTHLGVNCC------------------------------ 264
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW---I 364
A A++ +L++ ++ L+VYPNSGE YD W
Sbjct: 265 ------AETVAKLSLDILQQ-------------HTSLQLIVYPNSGEVYDGATKTWSGNC 305
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
D E ++DW V+++GGCCRT ++H++D ++S
Sbjct: 306 DSSFLEAAT--LSDW-QTSVSILGGCCRTGPPHIAFLRHKVDGFLS 348
>gi|406864213|gb|EKD17259.1| homocysteine S-methyltransferase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 443
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 177/440 (40%), Gaps = 93/440 (21%)
Query: 4 VKLIDGGFSSQLSTYVGDII-DGHPLWSSYFLATAKDAVVQ-THRDFIKAGADIVMTNSY 61
+ L+DGG + L G + D PLWSS+ L + A ++ TH F +AG+D++++ +Y
Sbjct: 19 ILLLDGGLGTSLVDEHGCVFNDSTPLWSSHLLISDPTAALRATHAAFARAGSDVLLSATY 78
Query: 62 QASIGGFMEF-LDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
QAS GF +D ++ QL++S+VD ++A + +A S+G
Sbjct: 79 QASFAGFARTRAGIDAVAAAQLMRSAVDVARDAFLGSPAGGGGK---------VALSLGA 129
Query: 121 YGASLRDGSEYRGDY-VEHVSEATMAEWH--RLITDDPARDILIAGSVGPY--------- 168
YGA++ EY G Y E +S A + WH R+ P R+ VG +
Sbjct: 130 YGATMVPSQEYSGRYDEERMSVAGLESWHWERMRAFVPGRE-----RVGSFEGGGGGGGG 184
Query: 169 --GASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR 226
G + + D E + +++ E G +A ET+P E + + R
Sbjct: 185 GGGGEGPEDEDGDEDGDEDGDGDGDGDEEEEKVRVWKEVG--FVAFETLPLRLEIEAVRR 242
Query: 227 LLREWPHQKAWLSFSC---KDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLM 281
++ +C + + +G V R+ + VG+NC +
Sbjct: 243 VMGRVRGGARDFWIACVFPGEGNRLPDGTCVRDVVRSMLGKGEGMAVPMGVGLNCTKVGK 302
Query: 282 VSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
V SL+ + ++E + + A EA EWP+
Sbjct: 303 VESLVLEFESE----------------VREMVAEGEA--------EWPS----------- 327
Query: 342 ENIPLVVYPN--SGERYDAVNARWI-------------DRDLCEPVDKYVTDWLDEGVAL 386
LVVYP+ +GE YD W+ D + V + L + + L
Sbjct: 328 ----LVVYPDGTNGEVYDTTTKEWVKAAAAGSQSMMSWDETMWGIVKRATERGLWKSI-L 382
Query: 387 VGGCCRTYAEDTLHMKHRLD 406
VGGCC+T ED ++ R+D
Sbjct: 383 VGGCCKTTPEDIGKLRMRID 402
>gi|70985372|ref|XP_748192.1| homocysteine S-methyltransferase [Aspergillus fumigatus Af293]
gi|66845820|gb|EAL86154.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
Af293]
Length = 343
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M +++++DGG + L G D PLWSS+ L + ++ R+FI AG D+++T
Sbjct: 1 MTSIQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQ SI GF ++ + + ++ Y++ A+A+ A AR+ S A+ IA S+
Sbjct: 61 TYQVSIEGFARTKTPEFPDG--IPRPAIGKYLRTALAV-AEQARV-SPSAAK---IALSL 113
Query: 119 GPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
GPYGA + G EY G Y EH SE T+ +WH
Sbjct: 114 GPYGACMIPGQEYSGKYDAEHDSEETLFQWH 144
>gi|159125886|gb|EDP51002.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
A1163]
Length = 343
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M +++++DGG + L G D PLWSS+ L + ++ R+FI AG D+++T
Sbjct: 1 MTSIQILDGGLGTSLQDQHGVTFDSSTPLWSSHLLVSDPTTLLACQRNFITAGCDVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQ SI GF ++ + + ++ Y++ A+A+ A AR+ S A+ IA S+
Sbjct: 61 TYQVSIEGFARTKTPEFPDG--IPRPAIGKYLRTALAV-AEQARV-SPSAAK---IALSL 113
Query: 119 GPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
GPYGA + G EY G Y EH SE T+ +WH
Sbjct: 114 GPYGACMIPGQEYSGKYDAEHDSEETLFQWH 144
>gi|242776848|ref|XP_002478914.1| homocysteine S-methyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722533|gb|EED21951.1| homocysteine S-methyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 369
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 170/421 (40%), Gaps = 96/421 (22%)
Query: 3 NVKLIDGGFSSQL--STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ L+DGG + L S + PLWSS+ L + + H F AGADI++T +
Sbjct: 23 QILLLDGGLGTTLEASPFNVQFTPEKPLWSSHLLIDSPSTLQAAHHAFCDAGADIILTAT 82
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ S GF +SSY + + Y++ AI L + +DD R + + S+GP
Sbjct: 83 YQTSTEGFTR-----TNSSYT-ARDAAQYMRSAIPLVRSAVSSTADDKKRSVAL--SLGP 134
Query: 121 YGASLRD-GSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
YGA++ +EY G Y E E + EWH + + I + +
Sbjct: 135 YGATMSPVSAEYTGIYPPEMDGENALREWH-------TQRLKI----------FTESEDE 177
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
D V++++ T+ + A+ A D++ ++ SK+ +C + P ++
Sbjct: 178 SWDQVDYIAFETLR--RADEVCAVRGAVCDVVGRDS--TSKKPWWICGVF---PGEQV-- 228
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSSLIEQLKTENIPL 296
+ E Q R +P + +G+NC R V +++ ++ E L
Sbjct: 229 -----------DEEEIRQWVRAAVGNHPGLPRPWGIGLNCTRIDRVEAIVSIMRDEVRRL 277
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS--GE 354
+ +AQ + EW + K W LV+YP+ GE
Sbjct: 278 L------------------DQAQ-----IDEWASSKPW-----------LVLYPDGTKGE 303
Query: 355 RYDAVNARWIDR---DLCEPVDKYVTDWLDE------GVALVGGCCRTYAEDTLHMKHRL 405
+YD V W+ + P D+ D + G +VGGCCR D ++ R+
Sbjct: 304 KYDPVTKTWVQSVTDTVKRPWDEIFWDIIQHQSKAEWGGIVVGGCCRAGPADIAALRRRI 363
Query: 406 D 406
D
Sbjct: 364 D 364
>gi|323358681|ref|YP_004225077.1| homocysteine/selenocysteine methylase [Microbacterium testaceum
StLB037]
gi|323275052|dbj|BAJ75197.1| homocysteine/selenocysteine methylase [Microbacterium testaceum
StLB037]
Length = 285
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 96/239 (40%), Gaps = 60/239 (25%)
Query: 156 ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI 215
A D+ +A SVGP GA DGSEY G+Y + + R R+ A +AGAD+LAIETI
Sbjct: 94 AGDVAVAASVGPMGALRADGSEYTGEYGLTLEQLRDRHRRRLRVLA--DAGADLLAIETI 151
Query: 216 PASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 275
PA E + L L E A S S D ++ S + RT + +IAVGVN
Sbjct: 152 PAELEVEALS-LELEGLGIPALFSLSA-DSTGFASAGSLDRALRTAASAP--GVIAVGVN 207
Query: 276 CVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
C P V L IPLV YPN+GE
Sbjct: 208 CCAPETV--LPALAGAPGIPLVAYPNTGE------------------------------- 234
Query: 336 SFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTY 394
R+DA W R P+ DW+ G LVGGCCR+
Sbjct: 235 -------------------RWDATTRTW--RGATAPLADAAPDWVAAGARLVGGCCRSL 272
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 23/134 (17%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
A ++DGG + L D+ LWS+ L D V H FI AGA++V+T+SY
Sbjct: 10 ARAVVLDGGLGTLLEARGNDV--SSSLWSARILRDDPDEVRAAHAAFIDAGAEVVITSSY 67
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Q G + D D D+ L++ SV +E A D+ +A SVGP
Sbjct: 68 QVGFG--VGIPDADVDT---LLRRSVTLARE----------------AGDVAVAASVGPM 106
Query: 122 GASLRDGSEYRGDY 135
GA DGSEY G+Y
Sbjct: 107 GALRADGSEYTGEY 120
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSG 569
D ++ S + RT + +IAVGVNC P V P + IPLV YPN+G
Sbjct: 178 DSTGFASAGSLDRALRTAASAP--GVIAVGVNCCAPETVLPALA--GAPGIPLVAYPNTG 233
Query: 570 ERYD 573
ER+D
Sbjct: 234 ERWD 237
>gi|378729086|gb|EHY55545.1| homocysteine S-methyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 333
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 161/428 (37%), Gaps = 131/428 (30%)
Query: 3 NVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
N+ L+DGG + L G PLWSS+ L + RDF AGADI++T +Y
Sbjct: 9 NILLLDGGLGTTLEDEHGVRFSVKTPLWSSHLLVENPSLLRVVQRDFANAGADIILTATY 68
Query: 62 QASIGGFMEF-----LDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG 116
QAS GF + + D + + + S+V ++A R L+A
Sbjct: 69 QASFEGFRNTKTQNDVGIAADDAKKYMLSAVSIARDAFN-------------GRSGLVAL 115
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
S+G YGA++ +EY G+Y GP
Sbjct: 116 SLGAYGATMVPSTEYSGEY------------------------------GP--------- 136
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQAL-----VEAGADILAIETIPASKEAQMLCRLLREW 231
++E + ++H RI V A D++A ET+P E ++ +++R
Sbjct: 137 ---------MNEDDLFKFHMDRISIFTCDKPVWADIDLVAFETLPRLDEVRVARKVMRTI 187
Query: 232 PHQKAWLS--FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL 289
+ W+S F DD+ + +G + RT + + A+G+NC + V LI +
Sbjct: 188 TDKDYWISCVFPNNDDR-LPDGTEVEDLVRTMLH-GERRPFAIGLNCTKVHKVPGLIRRF 245
Query: 290 KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
++A S S K LV+Y
Sbjct: 246 -----------------------------------------EEAAQSLSIKLPR--LVIY 262
Query: 350 PNSG--ERYDAVNARWI---------DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDT 398
P+ + YD +W+ D+ + E V T EGV +VGGCC+T E
Sbjct: 263 PDGAGTKVYDTQLQQWVGEDQDAKAWDQQIFEIVSDVQTRGAWEGV-IVGGCCKTTPEHI 321
Query: 399 LHMKHRLD 406
+ RLD
Sbjct: 322 QKLGKRLD 329
>gi|379735840|ref|YP_005329346.1| Homocysteine S-methyltransferase [Blastococcus saxobsidens DD2]
gi|378783647|emb|CCG03315.1| Homocysteine S-methyltransferase [Blastococcus saxobsidens DD2]
Length = 302
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 134/301 (44%), Gaps = 68/301 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG S++L + D+ LWS+ L A+V H F AGA + T SYQA++
Sbjct: 18 VLDGGLSTELESRGHDV--SSALWSARLLRDDPAAIVSAHAAFAAAGAQVATTASYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF A+ ++A AR LIA SV A
Sbjct: 76 EGF-----------------------AAVGVDADVARR---------LIASSV----ALA 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RDG W +AGSVGPYGA L DGSEY G YV
Sbjct: 100 RDGQGT--------------GW-------------VAGSVGPYGAMLADGSEYTGGYVAE 132
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ A + +HRPR++ L +AGAD+LA ET+PA+ EA+ L +E WLS + D
Sbjct: 133 MDVAALCAFHRPRMELLAQAGADVLACETVPAAAEAEALLLAAQE-LGVPVWLSLTTVVD 191
Query: 246 KHISNGESFTQVARTCY--NMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303
++A + + +++AVGVNC P V + T P+V YPNSG
Sbjct: 192 AAGVARTRRGELAADVFAMAADVAEVVAVGVNCTAPDAVRPAVLAAGTSGKPVVAYPNSG 251
Query: 304 E 304
E
Sbjct: 252 E 252
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 337 FSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
+ T P+V YPNSGE +DA RW D W G LVGGCCR
Sbjct: 235 LAAGTSGKPVVAYPNSGETWDAGARRWAGPPGVAADDAVA--WTTAGARLVGGCCRVRPA 292
Query: 397 D 397
D
Sbjct: 293 D 293
>gi|268571807|ref|XP_002648813.1| Hypothetical protein CBG15622 [Caenorhabditis briggsae]
Length = 293
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 158/413 (38%), Gaps = 127/413 (30%)
Query: 4 VKLIDGGFSSQLSTYVGD--IIDGHPLWSSYFLATAKDAVV-QTHRDFIKAGADIVMTNS 60
V+L+DG S QL + D ++ P WS F A + ++ Q +R F+ G+ I+ TN+
Sbjct: 2 VRLMDGSMSVQLKQFGYDCNALENKPHWS--FPANSDMHLMEQVYRSFLDLGSKIITTNT 59
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y F LD D + + + + + + + L + IR I GSVG
Sbjct: 60 YH-----FGSTLDRKLDKNEENFEKTCNLL---VNLAKEYEGIR---------IFGSVGT 102
Query: 121 YGASLRDGSEYRGDYVEHVSEATMA--EWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
D SEY G Y++ T A +H+++T +
Sbjct: 103 LATFYHDLSEYSGKYMDLPDAETTAFNYFHKILTI------------------------F 138
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
+G + +I+ L+ ETIP++ EA + +L ++P KA
Sbjct: 139 QG---------------KTKIRNLI--------FETIPSALEATVALDVLEQFPEMKAIF 175
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP-LV 297
SF+ K++ H+ +GE + Q+ +G+NC P V S+++ +K P +
Sbjct: 176 SFTFKENAHLRHGEHIETILVKL--KKSKQIFGIGINCTDPENVLSVLKSVKNLGFPEIF 233
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPN G+ R L S KTEN L
Sbjct: 234 VYPNMGD-----------------SRFL------------SGKTENFDL----------- 253
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
D++L E +W+ G +GGCC +K +D+ S
Sbjct: 254 ------FDKELVE-------NWVKNGTTAIGGCCGVTENQMRILKKLVDNLNS 293
>gi|380302732|ref|ZP_09852425.1| homocysteine methyltransferase [Brachybacterium squillarum M-6-3]
Length = 308
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 99/236 (41%), Gaps = 56/236 (23%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+ S+GPYGA G+EY GDY V+E + WHR RI L + GAD+L ET+P+ +E
Sbjct: 113 VVASIGPYGAGPGRGTEYDGDYGLTVAE--LRAWHRDRIAVLDDTGADLLLAETVPSIRE 170
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280
+ L L + A LS + + + +G ++ AR + L+AVGVNC
Sbjct: 171 VEALVDEL-DGRRTPAALSLTVRG-TVLGDGTPVSEAARI---LAGSSLVAVGVNCC--- 222
Query: 281 MVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCK 340
T+P + A + R +
Sbjct: 223 ------------------------------TVPDALTAHAILR----------------E 236
Query: 341 TENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 396
++PL+ YPNSGE +D W + + + L GV L+GGCCR E
Sbjct: 237 HSDLPLMAYPNSGESWDHEARAWREGSAEQDLVASAPGLLGAGVRLLGGCCRVGPE 292
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 75/303 (24%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG + L+ D+ LWS+ L + + V HRDF+ AGA ++ T SYQ S
Sbjct: 19 VLDGGLGTHLADCGLDVTGA--LWSAEVLRSRPEEVRAAHRDFLDAGAQVLTTCSYQVSA 76
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G + + D + L+++SV +E +D+ + S+GPYGA
Sbjct: 77 DG-LAAVGADPTEAEDLLRTSVRLARET-----------ADEVEGPRWVVASIGPYGAGP 124
Query: 126 RDGSEYRGDYVEHVSEATMAEWHR---LITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
G+EY GDY V+E + WHR + DD D+L+A
Sbjct: 125 GRGTEYDGDYGLTVAE--LRAWHRDRIAVLDDTGADLLLA-------------------- 162
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
ET+P+ +E + L L + A LS +
Sbjct: 163 ------------------------------ETVPSIREVEALVDEL-DGRRTPAALSLTV 191
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR-PLMVSSLIEQLKTENIPLVVYPN 301
+ + +G ++ AR + L+AVGVNC P +++ + ++PL+ YPN
Sbjct: 192 R-GTVLGDGTPVSEAARI---LAGSSLVAVGVNCCTVPDALTAHAILREHSDLPLMAYPN 247
Query: 302 SGE 304
SGE
Sbjct: 248 SGE 250
>gi|384499212|gb|EIE89703.1| hypothetical protein RO3G_14414 [Rhizopus delemar RA 99-880]
Length = 291
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 63/262 (24%)
Query: 51 AGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPAR 110
+GA++ T SYQASI GF++ Y +E +E + I AR
Sbjct: 26 SGANVATTCSYQASIEGFLQ----------------AGYTREH-GVELMNKSISLACEAR 68
Query: 111 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGA 170
D E+R ++ E E L+A S+G YGA
Sbjct: 69 D------------------EFRKEHPEDKEER-----------------LVALSIGCYGA 93
Query: 171 SLRDGSEYRGDYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLR 229
L +GSEY GDY +++ + ++H+ R++ + G D + ETIP+ EA+ + ++++
Sbjct: 94 ILANGSEYTGDY-GNITIDRLVQFHKDRLEIFLGNKGVDFVLFETIPSVLEAEAIVKIMK 152
Query: 230 EWPH-QKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQ 288
E ++F C+ D I++G V + D + AVGVNC +P + L+ +
Sbjct: 153 EMNDLPPVGVAFQCRSDHQIADGTDLLYVLSLFDKL--DCVFAVGVNCTKPQHIERLVSR 210
Query: 289 L------KTENIPLVVYPNSGE 304
+ K + L++YP+ GE
Sbjct: 211 IVEVNKEKEDKKALLLYPDGGE 232
>gi|307193332|gb|EFN76194.1| Homocysteine S-methyltransferase [Harpegnathos saltator]
Length = 342
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 151/413 (36%), Gaps = 104/413 (25%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M V ++DG QLS + I + + + L +DAV + H DF++AGA I+ TN+
Sbjct: 1 MDKVIVLDGALDKQLSRNMPHISETDEVLAMRALMYDQDAVYKAHLDFLRAGAQIIRTNT 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y+ +I F S++ L D + A+ +R
Sbjct: 61 YRTTISLF--------PSAFGLPICICDQTRVITAVALAKKAVRK--------------- 97
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR- 179
Y E + + I D R LIAG DG +
Sbjct: 98 --------------YFEEIGGDSNN-----IEDYNQRRPLIAGCC--------DGYNFLP 130
Query: 180 ----GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235
G + + + + +H RI LV +G DILA E+I E + + LR++P +
Sbjct: 131 FYDVGKITKELPISQLLSFHEERIDILVRSGVDILAFESISCLIEVIAISQALRKYPTIR 190
Query: 236 AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP 295
W++F CK + + + C P QL+AVGV C ++S +E ++T
Sbjct: 191 VWITFLCKMNGDLLDDNLLITAIMLCKETLPGQLMAVGVEC---QYIASSLEPIRT---- 243
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
L+R N K W+ P + Y +
Sbjct: 244 ----------------------------LMRNINNFKDWV--------FPFLFYIDKNH- 266
Query: 356 YDAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
++ + D P + V WLD GV VGG T AED + +D
Sbjct: 267 ---LSTMTVPVDAAGPSRPVQPVAQWLDIGVRYVGGGFGTNAEDIKEICREVD 316
>gi|121719378|ref|XP_001276388.1| homocysteine S-methyltransferase, putative [Aspergillus clavatus
NRRL 1]
gi|119404586|gb|EAW14962.1| homocysteine S-methyltransferase, putative [Aspergillus clavatus
NRRL 1]
Length = 342
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 172/428 (40%), Gaps = 112/428 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
MA+++++DGG + L G D PLW+S+ L + ++ R+FI A D+++T
Sbjct: 1 MASIEILDGGLGTSLQDQHGVTFDSSTPLWASHLLVSDPTTLLACQRNFINADTDVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ SI GF +DY + + Y++ AI + + + + A+ IA S+G
Sbjct: 61 TYQVSIEGFERTKTVDYPTGIPR-NAIAKYLRTAIDIA---EQAKGNSTAK---IALSLG 113
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWH----RLITDDPARDILIAGSVGPYGASLRD 174
PYGA + G EY G Y EH +E + +WH RL ++
Sbjct: 114 PYGACMIPGQEYSGKYDAEHDTEEKLFQWHLERLRL---------------------FQE 152
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234
E + V++V+ T+ PR+ +I A++ + + + +P +
Sbjct: 153 ADERLSERVQYVAFETL-----PRLD-------EIRAVKRAIHAAGLNVPFWVACVFPGE 200
Query: 235 KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSSLIEQLKTE 292
+A L +G S +V PDQ + +G+NC + ++ L+
Sbjct: 201 QAAL----------PDGSSVEEVVTAALAEMPDQSVPWGIGINCTKIHKLNGLMR----- 245
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP-LVVYPN 351
N GE I AS A + + +P LV+YP+
Sbjct: 246 --------NFGEKI-------ASAMA-------------------AGRVSTVPTLVLYPD 271
Query: 352 --SGERYDAVNARW-----IDRDLCEPVDKYVTDWLDEGVA-------LVGGCCRTYAED 397
+GE Y+ W D P +K + +++ A LVGGCC+ D
Sbjct: 272 GTNGEVYNTTTQTWEKPEGYTNDDARPWEKQLGQIVNDAGANGPFTSFLVGGCCKASHND 331
Query: 398 TLHMKHRL 405
+ +L
Sbjct: 332 IRKLAEQL 339
>gi|238506367|ref|XP_002384385.1| homocysteine S-methyltransferase, putative [Aspergillus flavus
NRRL3357]
gi|220689098|gb|EED45449.1| homocysteine S-methyltransferase, putative [Aspergillus flavus
NRRL3357]
Length = 376
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 171/434 (39%), Gaps = 102/434 (23%)
Query: 4 VKLIDGGFSSQLS------TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L T+ + PLWS++ L ++ + + H+ F GADI++
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAET----PLWSAHLLISSPSTLEEVHKAFATVGADIIL 63
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
T +YQ S GF D Y + + +++ AI L AR R + +A S
Sbjct: 64 TATYQTSFEGFT-LTDPRYTAD-----DAAHFMRSAIPL----ARRAGSSSGRTVKVALS 113
Query: 118 VGPYGASLRD-GSEYRGDYVEHV-SEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
+GPYGA++ G+EY G Y E + SEA + EWH R + G +
Sbjct: 114 LGPYGATMSPVGAEYTGLYPEEMNSEAKLREWH------ARRLCVFVDETGSW------- 160
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILA---IETIPASKEAQMLCRLLREWP 232
D E+++ T+ ++A+ A +D+LA P S++ Q+
Sbjct: 161 -----DNFEYIAFETVR--RADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAM------- 206
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI------AVGVNCVRPLMVSSLI 286
+K W D+ + + V + + +GVNC R V ++
Sbjct: 207 GKKPWWICGVFPDEEVDEEDVRAWVRAAVGTQEEETGVYLPRPWGIGVNCTRIGNVGRIV 266
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPN--QKAWLSFSCKTENI 344
++ E L G + EW + K WL
Sbjct: 267 SIMQDELRNLEDLRTKG--------------------YVDEWNSVTGKPWL--------- 297
Query: 345 PLVVYPN--SGERYDAVNARWIDRDLCEPVDKY------VTDWLDEGV---ALVGGCCRT 393
V+YP+ +GE+YD V W+ + + + V L EG ++GGCCR
Sbjct: 298 --VLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGVVMGGCCRA 355
Query: 394 YAEDTLHMKHRLDD 407
E ++ R+D+
Sbjct: 356 GPEQIATLRRRIDE 369
>gi|169785373|ref|XP_001827147.1| homocysteine S-methyltransferase [Aspergillus oryzae RIB40]
gi|83775895|dbj|BAE66014.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 376
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 171/434 (39%), Gaps = 102/434 (23%)
Query: 4 VKLIDGGFSSQLS------TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L T+ + PLWS++ L ++ + + H+ F GADI++
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAET----PLWSAHLLISSPSTLEEVHKAFATVGADIIL 63
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
T +YQ S GF D Y + + +++ AI L AR R + +A S
Sbjct: 64 TATYQTSFEGFT-LTDPRYTAD-----DAAHFMRSAIPL----ARRAGSSSGRTVKVALS 113
Query: 118 VGPYGASLRD-GSEYRGDYVEHV-SEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
+GPYGA++ G+EY G Y E + SEA + EWH R + G +
Sbjct: 114 LGPYGATMSPVGAEYTGLYPEEMNSEAKLREWH------ARRLCVFVDETGSW------- 160
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILA---IETIPASKEAQMLCRLLREWP 232
D E+++ T+ ++A+ A +D+LA P S++ Q+
Sbjct: 161 -----DNFEYIAFETVR--RADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAM------- 206
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI------AVGVNCVRPLMVSSLI 286
+K W D+ + + V + + +GVNC R V ++
Sbjct: 207 GKKPWWICGVFPDEEVDEEDVRAWVRAAVGTQEGETGVYLPRPWGIGVNCTRIGNVGRIV 266
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPN--QKAWLSFSCKTENI 344
++ E L G + EW + K WL
Sbjct: 267 SIMQDELRNLEDLRTKG--------------------YVDEWNSVTGKPWL--------- 297
Query: 345 PLVVYPN--SGERYDAVNARWIDRDLCEPVDKY------VTDWLDEGV---ALVGGCCRT 393
V+YP+ +GE+YD V W+ + + + V L EG ++GGCCR
Sbjct: 298 --VLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGIVMGGCCRA 355
Query: 394 YAEDTLHMKHRLDD 407
E ++ R+D+
Sbjct: 356 GPEQIATLRRRIDE 369
>gi|341898874|gb|EGT54809.1| hypothetical protein CAEBREN_31638 [Caenorhabditis brenneri]
Length = 340
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 140/338 (41%), Gaps = 65/338 (19%)
Query: 1 MANVKLIDGGFSSQLST--YVGDIIDGHPLWSSYFLATAKDAVVQ-THRDFIKAGADIVM 57
M +L+DG S QL Y + I+ P W+ F A + ++++ +R F+ G + +
Sbjct: 1 MKKYRLLDGSMSEQLKQFGYNCNDINNKPHWT--FPANSDQSLMEKVYRSFLDIGVNNIT 58
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
TN+Y F LD + + K Y ++ +L A+ D+ + GS
Sbjct: 59 TNTYH-----FGSILDKNLSGQEEKCKLYEKYFEDTCSLLCNLAQ-----QYDDVQVWGS 108
Query: 118 VGPYGASLRDGSEYRGDYVEHV-SEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
VG + D SEY G Y+++ +E + E+++ I
Sbjct: 109 VGTFATKFHDCSEYNGKYMDNAGAEESAYEYYKTI------------------------- 143
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA 236
T+ + R I+ L+ ETIP+ E ++ ++L+E+ KA
Sbjct: 144 ------------LTLFQ-ERTTIRNLI--------FETIPSQLEGEVALKVLKEFKEMKA 182
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIP 295
+SF+ ++ + +GE +A+ +Q+I +G+NC P V ++E +K E
Sbjct: 183 VISFTFMENACLRHGEHVADIAKKL--KESEQIIGMGINCTDPKNVLPVLEAIKNCEFSD 240
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333
+ VYPN G+ + ++ LR W A
Sbjct: 241 IFVYPNLGDAFFMVAEKGDFDDSDNYDHRLRSWIEHGA 278
>gi|391873422|gb|EIT82465.1| homocysteine S-methyltransferase [Aspergillus oryzae 3.042]
Length = 376
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 171/434 (39%), Gaps = 102/434 (23%)
Query: 4 VKLIDGGFSSQLS------TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L T+ + PLWS++ L ++ + + H+ F GADI++
Sbjct: 8 ILLLDGGLGTTLGDPPHNITFTAET----PLWSAHLLISSPSTLEEVHKAFATVGADIIL 63
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
T +YQ S GF D Y + + +++ AI L AR R + +A S
Sbjct: 64 TATYQTSFEGFT-LTDPRYTAD-----DAAHFMRSAIPL----ARRAGSSSGRTVKVALS 113
Query: 118 VGPYGASLRD-GSEYRGDYVEHV-SEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
+GPYGA++ G+EY G Y E + SEA + EWH R + G +
Sbjct: 114 LGPYGATMSPVGAEYTGLYPEEMNSEAKLREWH------ARRLCVFVDETGSW------- 160
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILA---IETIPASKEAQMLCRLLREWP 232
D E+++ T+ ++A+ A +D+LA P S++ Q+
Sbjct: 161 -----DNFEYIAFETVR--RADEVKAIRGAMSDVLADMYQGQGPDSEKNQLAM------- 206
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI------AVGVNCVRPLMVSSLI 286
+K W D+ + + V + + +GVNC R V ++
Sbjct: 207 GKKPWWICGVFPDEEVDEEDVRAWVRAAVGTQEGETGVYLPRPWGIGVNCTRIGNVGRIV 266
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPN--QKAWLSFSCKTENI 344
++ E L G + EW + K WL
Sbjct: 267 SIMQDELRNLEDLRTKG--------------------YVDEWNSVTGKPWL--------- 297
Query: 345 PLVVYPN--SGERYDAVNARWIDRDLCEPVDKY------VTDWLDEGV---ALVGGCCRT 393
V+YP+ +GE+YD V W+ + + + V L EG ++GGCCR
Sbjct: 298 --VLYPDGTNGEKYDPVTKTWVATETGKETRPWHEIYWDVVQGLPEGAWEGIVMGGCCRA 355
Query: 394 YAEDTLHMKHRLDD 407
E ++ R+D+
Sbjct: 356 GPEQIATLRRRIDE 369
>gi|150864416|ref|XP_001383215.2| AdoMet-homocysteine methyltransferase [Scheffersomyces stipitis CBS
6054]
gi|149385672|gb|ABN65186.2| AdoMet-homocysteine methyltransferase [Scheffersomyces stipitis CBS
6054]
Length = 337
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 82/328 (25%)
Query: 26 HPLWSSYFLATAKDAVVQTHRDFI-KAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIK 84
HPLWS L + + H +++ +A D +++++YQ S E DLD + + K
Sbjct: 38 HPLWSGLVLLNEPNLIKNVHYNYLEQADVDALISSTYQISYPSLKEHTDLDDEQIRGIWK 97
Query: 85 SSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATM 144
S+D V++AI R ++ + + I I GS+GPY L DGSEY GDY ++ S++ +
Sbjct: 98 KSIDVVEDAIL----QYRSKNSNSKKKIYIIGSIGPYATYLADGSEYTGDY-KNASDSDI 152
Query: 145 AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE 204
+H+ + + + GD
Sbjct: 153 ESYHQPLLE-----------------------YFLGD----------------------- 166
Query: 205 AGADILAIETIPASKEAQMLCRLL-----REWPHQKAWLSFSCKDDKHISNGE------S 253
D + ETIP+ +E +++ +LL + + ++SF+ D+ I++G S
Sbjct: 167 DRVDTIGFETIPSFQEVKVVLKLLSHLFAEQEKRKYYYISFNF-DEATITDGTPTEVVIS 225
Query: 254 FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN-------IPLVVYPNSGEHI 306
+ Y ++ +G+NC+ + S++ ++ PL+VYPN
Sbjct: 226 YIDSFLDKYPFLRKYMVGLGLNCIDYHKIGSIVAKINDSQTSAQKPLFPLIVYPN----- 280
Query: 307 LAIETIP------ASKEAQMLCRLLREW 328
I+ +P A K+ + L+ EW
Sbjct: 281 FTIKYVPEEDDYRAYKDIEKWKELVSEW 308
>gi|108862938|gb|ABA99259.2| Homocysteine S-methyltransferase 3, putative, expressed [Oryza
sativa Japonica Group]
Length = 156
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ V + H D+++AGA+I++T SYQA+I
Sbjct: 31 VMDGGLATELEANGADLND--PLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARD-ILIAGSVGPYGAS 124
GF E + S L+ SV+ +EA + + SD P + IL+A S+G YGA
Sbjct: 89 QGF-ESKGFSKEQSEDLLAKSVEIAREARDM---FLKEHSDRPIQHPILVAASIGSYGAY 144
Query: 125 LRDGSEYR 132
L DGSEYR
Sbjct: 145 LADGSEYR 152
>gi|426197486|gb|EKV47413.1| hypothetical protein AGABI2DRAFT_185360 [Agaricus bisporus var.
bisporus H97]
Length = 388
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 66/342 (19%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG + L + I PLWS+ L+ +A+V H +++AGA I+ T++YQ
Sbjct: 15 SVIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETSTYQ 74
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL-EATHARIRSDDPARDILIAGSVGPY 121
S+ F + D++ QL+ ++ ++A ++ + A I+ I I S+GP+
Sbjct: 75 CSLDTFQR-AGYNIDTAKQLMHRAISLAQKARSIFDTQRAAIQQSTAQPPIRICLSLGPF 133
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLR--DGSEYR 179
GASL E+ G Y P + P G S + + +
Sbjct: 134 GASLSPTQEFEGFY------------------PPPYE--------PRGYSTESMNSNYFD 167
Query: 180 GDYVEHVSEATMAEWHRPRIQALVE-----AGADILAIETIPASKEAQMLCRLLREWPHQ 234
D E + +A +H R+ E + D++A ET+P ++EA + R + ++ +
Sbjct: 168 EDSEEEKAIQALAAFHFERLMMFAEDKGTWSCIDMIAFETVPLAREAIAIRRTMAKFEDE 227
Query: 235 KA--------WLSFSCKDDK----HISNGESFTQVARTCYNMNPDQLI-----------A 271
W+SF + + ++GE T +++P+ L
Sbjct: 228 NRDNGMGKAWWISFVLPEGRCPQMTDTDGERLTASELVWASLSPNLLGGREDEDIGVPDG 287
Query: 272 VGVNCVRPLMVSSLIEQL--------KTENIPLVVYPNSGEH 305
+G+NC + +++++ + E LV+YPN G+
Sbjct: 288 LGINCTSVEYLPRIVDEMGLACMKIEREERPFLVLYPNGGDE 329
>gi|317497248|ref|ZP_07955572.1| homocysteine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895493|gb|EFV17651.1| homocysteine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 199
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 56/206 (27%)
Query: 204 EAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN 263
+AGADI+ ET+P+ KEA++ + E+ + W+SFSC + I G + A+T
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEYGYD-YWISFSCLSENIICEGTPIAECAKTFAK 99
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLC 322
P L +GVNC +P + LI ++K +IP+ VYPNSGE A++ +
Sbjct: 100 GYP-HLKMIGVNCTKPEYIVGLIHKIKENCDIPIGVYPNSGEEYDAVKKV---------- 148
Query: 323 RLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE 382
W +++ LSF D+Y +++
Sbjct: 149 -----WFGKQSALSF-----------------------------------DQYAYNYMKA 168
Query: 383 GVALVGGCCRTYA---EDTLHMKHRL 405
G + VGGCC T A ED + K +
Sbjct: 169 GASAVGGCCTTVAKHVEDVVRAKKQF 194
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 416 VGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDK 475
+G + LW++ LA + + Q H+++ K D + P+L + E ++
Sbjct: 10 IGGVSLNSKLWTAKILAEQPELIKQVHKNYFKAGA--DIILFETVPSLKEAKVEAEIAEE 67
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQL 535
Y D+ L + I G + A+T P L
Sbjct: 68 YGYDYWISFSCL----------------------SENIICEGTPIAECAKTFAKGYP-HL 104
Query: 536 IAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
+GVNC +P + LI ++K +IP+ VYPNSGE YD
Sbjct: 105 KMIGVNCTKPEYIVGLIHKIKENCDIPIGVYPNSGEEYD 143
>gi|156837038|ref|XP_001642555.1| hypothetical protein Kpol_1068p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113098|gb|EDO14697.1| hypothetical protein Kpol_1068p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 153/411 (37%), Gaps = 130/411 (31%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSY-FL----------ATAKDAVVQTHRDFIKAGADIV 56
DGG + L + ++ PLWS+ FL + ++ + +RD+I +G+ I+
Sbjct: 20 DGGLGTLLESRGINV--SSPLWSTVPFLKDDFWDSETKTSDRNIIEGIYRDYITSGSRIL 77
Query: 57 MTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAG 116
T +YQ S AL +TH +++ I G
Sbjct: 78 STITYQTSF-----------------------------ALISTHTEVKT--------IEG 100
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
Y +R+ + + + E + LI GS+GP+GA L G+
Sbjct: 101 ----YKQLIRN--------ITSFCRSAIGEDNYLI-----------GSIGPFGARL--GA 135
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREWPHQK 235
EY G+Y + S E+ +P+++ DI+ ET+P E + + + +
Sbjct: 136 EYTGNYGDSPSNINYLEYFKPQLEEFNNNDDIDIIGFETVPNKYELEAILSWDKSVISKP 195
Query: 236 AWLSFSCKDDKHISNGESFTQVARTCYNM-NPDQLIAVGVNCVRPLMVSSLIEQL--KTE 292
++S S D+ + +G SF ++A N D LI G NC+ S I +L
Sbjct: 196 YYVSLSLLDNGGLRDGTSFEEIATIFKKYSNNDNLILTGANCISFKYASENISKLHQAIP 255
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
+PL+VYPNSGE
Sbjct: 256 TLPLIVYPNSGEI----------------------------------------------- 268
Query: 353 GERYDAVNARW-IDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
YD + +W ID+ + + + V +VGGCCRT +D +K
Sbjct: 269 ---YDPLTKKWTIDQTFGLTWEDLIKELRTSNVRIVGGCCRTTPDDINKIK 316
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 510 DDKHISNGESFTQVARTCYNM-NPDQLIAVGVNCVRPLMVSPLIEQL--KTENIPLVVYP 566
D+ + +G SF ++A N D LI G NC+ S I +L +PL+VYP
Sbjct: 204 DNGGLRDGTSFEEIATIFKKYSNNDNLILTGANCISFKYASENISKLHQAIPTLPLIVYP 263
Query: 567 NSGERYD 573
NSGE YD
Sbjct: 264 NSGEIYD 270
>gi|385815026|ref|YP_005851417.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125063|gb|ADY84393.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 187
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 64/231 (27%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LW++ L D V Q H D+ AGA++V+T++YQA++ F + + + + I+ +V
Sbjct: 16 LWTATALINELDKVYQAHWDYFTAGAELVITDTYQANVQVFTQ-VGYSEQEAEKFIRDAV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
K+A R DY + +
Sbjct: 75 KVAKKA--------------------------------------RDDYEQKTGKHNY--- 93
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+AG+VG YGA L DG+EYRGDY +SE +H PR++ ++
Sbjct: 94 -------------VAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKP 138
Query: 208 DILAIETIPASKEAQMLCRLLRE----WPHQKAWLSFSCKDDKHISNGESF 254
D++A+ET P E + L+E +P ++SF+ KD HIS+G +
Sbjct: 139 DLIALETQPKLDEPLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTL 186
>gi|429762214|ref|ZP_19294614.1| hypothetical protein HMPREF0369_01139 [Anaerostipes hadrus DSM
3319]
gi|429182028|gb|EKY23153.1| hypothetical protein HMPREF0369_01139 [Anaerostipes hadrus DSM
3319]
Length = 199
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 56/208 (26%)
Query: 204 EAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN 263
+AGADI+ ET+P+ KEA++ + E+ + W+SFSC + I G + A T
Sbjct: 41 KAGADIILFETVPSLKEAKVEAEIAEEYGYD-YWISFSCLSENIICEGTPIAECATTFAK 99
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHILAIETIPASKEAQMLC 322
P L +GVNC +P ++ LI ++K +IP+ VYPNSGE A++ +
Sbjct: 100 GYP-HLKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPNSGEEYDAVKKV---------- 148
Query: 323 RLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE 382
W +++ LSF ++Y +++
Sbjct: 149 -----WFGKQSALSF-----------------------------------EQYAYNYMKS 168
Query: 383 GVALVGGCCRT---YAEDTLHMKHRLDD 407
G + VGGCC T + E+ + K R +
Sbjct: 169 GASAVGGCCTTVEKHVEEVVRAKKRFSE 196
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 416 VGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDK 475
+G + LW++ LA + + Q H+++ K D + P+L + E ++
Sbjct: 10 IGGVSLNSKLWTAKILAEQPELIKQVHKNYFKAGA--DIILFETVPSLKEAKVEAEIAEE 67
Query: 476 YVTD-WLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQ 534
Y D W+ + I G + A T P
Sbjct: 68 YGYDYWIS-----------------------FSCLSENIICEGTPIAECATTFAKGYP-H 103
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
L +GVNC +P ++ LI ++K +IP+ VYPNSGE YD
Sbjct: 104 LKMIGVNCTKPEYITGLIHKIKENCDIPIGVYPNSGEEYD 143
>gi|242213892|ref|XP_002472772.1| predicted protein [Postia placenta Mad-698-R]
gi|220728175|gb|EED82075.1| predicted protein [Postia placenta Mad-698-R]
Length = 380
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 168/446 (37%), Gaps = 116/446 (26%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
V ++DGGF + L I PLWS+ + + ++ H F++AGAD+++T++YQ
Sbjct: 1 VLILDGGFGTTLEDVFHQDIS-TPLWSARPIEDNPELIIAAHLAFLRAGADVILTSTYQC 59
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSV-------DYVKEAIALEATHARIRSDDPARDILIAG 116
+ F E + ++++ +V KE A + T + RDI IA
Sbjct: 60 AFQTF-ERSGYTREDGVRILRKAVLLATEARRQYKEEGAPDDTSTGLSGTAHVRDIKIAL 118
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
S+GP+GA+L E+ G Y GP G S ++G
Sbjct: 119 SLGPFGATLSPAQEFDGFYPP--------------------------PYGPKGLS-QEGG 151
Query: 177 EYR-------GDYVEHVSEATMAEWHRPRIQALVE-----AGADILAIETIPASKEAQML 224
Y G E + A + +H R++ALVE A D +A ET+P +E + +
Sbjct: 152 NYNAFPDSDDGKAQEEKAVAALTAFHLERLRALVEDVETWAAIDFVAFETVPLVREIRAI 211
Query: 225 CRLLREWPHQKA-------WLSF---SCKDDKHISNGESFTQV----------ARTCYNM 264
+ + W+S + + S GE V R
Sbjct: 212 RHAMELLVQENGASAAKPWWISTVYPGGRFPQERSPGEGRLTVRIVVEAIMGEGRLGAPQ 271
Query: 265 NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324
+P +GVNC P + L++++ NI + +G
Sbjct: 272 SPAPW-GLGVNCTEPQFIGGLLKEMT--NIMEGLGNTAGR-------------------- 308
Query: 325 LREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLD-EG 383
+Q WL VVYPN G+ YDA + W + V W D +
Sbjct: 309 -----SQSPWL-----------VVYPNRGDVYDAASQTWSKGAESIRQNWAVHVWADVQR 352
Query: 384 VA--------LVGGCCRTYAEDTLHM 401
VA L+GGCC+T ++ +
Sbjct: 353 VAGSKAWSGCLIGGCCKTGPQEIAEL 378
>gi|409080570|gb|EKM80930.1| hypothetical protein AGABI1DRAFT_56118 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 390
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 72/345 (20%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG + L + I PLWS+ L+ +A+V H +++AGA I+ T++YQ
Sbjct: 15 SVIILDGGLGTTLESISKTQIANTPLWSAEALSKDPEAIVAAHLAYLQAGAQIIETSTYQ 74
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPAR-DILIAGSVGPY 121
S+ F + D++ QL+ ++ ++A ++ T A+ I I S+GP+
Sbjct: 75 CSLDTFQR-AGYNIDTAKQLMHRAISLAQKARSIFNTQRSAMQQLIAQPPIRICLSLGPF 133
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GASL E+ G Y PYG +
Sbjct: 134 GASLSPTQEFEGFYPP-----------------------------PYGPRGYSTESMNSN 164
Query: 182 YVEHVSE-----ATMAEWHRPRIQALVE-----AGADILAIETIPASKEAQMLCRLLREW 231
Y + SE +A +H R+ E + D++A ET+P ++EA + R + ++
Sbjct: 165 YFDEDSEEEKAIQALAAFHFERLMMFAEDKGTWSCIDMIAFETVPLAREAIAIRRTMAKF 224
Query: 232 PHQKA--------WLSFSCKDDK----HISNGESFTQVARTCYNMNPDQLI--------- 270
+ W+SF + + ++GE T +++P+ L
Sbjct: 225 EDENRDNGMGKAWWISFVLPEGRCPQMTDTDGERLTASELVWASLSPNLLGGREDEDVGV 284
Query: 271 --AVGVNCVRPLMVSSLIEQL--------KTENIPLVVYPNSGEH 305
G+NC + +++++ + E LV+YPN G+
Sbjct: 285 PDGFGINCTSVEYLPRIVDEMGLACMKIEREERPFLVLYPNGGDE 329
>gi|338995681|ref|ZP_08635393.1| homocysteine methyltransferase, partial [Halomonas sp. TD01]
gi|338766423|gb|EGP21343.1| homocysteine methyltransferase [Halomonas sp. TD01]
Length = 182
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 47/210 (22%)
Query: 189 ATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHI 248
A + +HR R + L+ AGAD+LA ET+P+ EA + LL E P +AW++FS KD KHI
Sbjct: 1 AGLVAFHRERFELLLAAGADLLAAETLPSLDEALAITDLLAEHPGAQAWITFSAKDGKHI 60
Query: 249 SNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGEHIL 307
S+G + A N + A+GVNC + SLI+ ++ + ++P++VYPNSGE
Sbjct: 61 SDGTPIEECAAALANC--PGVAAIGVNCTALPHIESLIQAIRRQCDLPVLVYPNSGEVYD 118
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRD 367
A+ K W +C + SG A
Sbjct: 119 AV---------------------TKTWHPATCD--------HTASGPSALA--------- 140
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ V WL G + +GGCCRT D
Sbjct: 141 ------QGVEQWLAAGASAIGGCCRTAPAD 164
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D KHIS+G + A N + A+GVNC + LI+ ++ + ++P++VYPNS
Sbjct: 56 DGKHISDGTPIEECAAALANC--PGVAAIGVNCTALPHIESLIQAIRRQCDLPVLVYPNS 113
Query: 569 GERYD 573
GE YD
Sbjct: 114 GEVYD 118
>gi|227832445|ref|YP_002834152.1| homocysteine methyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|227453461|gb|ACP32214.1| homocysteine S-methyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 292
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 121/301 (40%), Gaps = 72/301 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG + L DI PLWS+ L + H DF AGA + T SYQ +
Sbjct: 9 LLDGGLGTHLEAQGHDI--SGPLWSARVLRENPTLLESAHADFFAAGAQVATTASYQVT- 65
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
D+ + + L++ SV +EA+ R+ D
Sbjct: 66 ------FDVLGEDAEALLRRSVAVAREAV-------RVAVD------------------- 93
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+H + D+L+A S+GPYGA G++Y G Y
Sbjct: 94 -----------KHTAHG---------------DLLVAASIGPYGAGPGKGTDYDGAY--D 125
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+ + WH RI L + AD L ETIP EA L LL+ P F+
Sbjct: 126 LRRGELQRWHARRIAVLADTDADFLLAETIPNVDEAAALLELLKAQPK-----PFALSIT 180
Query: 246 KHISNGES-FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
I+ ++ +QV + +L A+GVNCV P +++ L+ + PL+ PNSG
Sbjct: 181 GAIAADQAKLSQVIELANQSS--RLGALGVNCVSPSQARAVVATLRAGTDKPLLACPNSG 238
Query: 304 E 304
E
Sbjct: 239 E 239
>gi|115384034|ref|XP_001208564.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196256|gb|EAU37956.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 345
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
MA ++++DGG + L G PLWSS+ L + + DF AG D+++T
Sbjct: 1 MATIQILDGGLGTSLQDQYGVEFSSTTTPLWSSHLLVSDPGTLQSCQHDFGVAGVDVLLT 60
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGS 117
+YQ SI GF D+ + + K+++ Y++ A+ + A A+ R D A+ IA S
Sbjct: 61 ATYQVSIEGFARTKTADFPNG--IPKTAIAPYLQTAVTV-AEQAKAR--DSAK---IALS 112
Query: 118 VGPYGASLRDGSEYRGDY-VEHVSEATMAEWH----RLITD 153
+GPYGA + G EY G+Y EH SE + WH RL D
Sbjct: 113 LGPYGACMIPGQEYSGEYDAEHDSEEALFRWHLERLRLFQD 153
>gi|418029360|ref|ZP_12667904.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|354690208|gb|EHE90161.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 187
Score = 79.3 bits (194), Expect = 6e-12, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 64/231 (27%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LW++ L D V Q H D+ AGA++V+T++YQA++ F + + + I+ +V
Sbjct: 16 LWTATALINELDKVYQAHWDYFTAGAELVITDTYQANVQVFTQ-AGYSEQEAEKFIRDAV 74
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
K+A R DY + +
Sbjct: 75 KVAKKA--------------------------------------RDDYEQKTGKHNY--- 93
Query: 148 HRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA 207
+AG+VG YGA L DG+EYRGDY +SE +H PR++ ++
Sbjct: 94 -------------VAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKP 138
Query: 208 DILAIETIPASKEAQMLCRLLRE----WPHQKAWLSFSCKDDKHISNGESF 254
D++A+ET P E + L+E +P ++SF+ KD HIS+G +
Sbjct: 139 DLIALETQPKLDEPLAVLNWLKENASDYP---IYVSFTLKDATHISDGTTL 186
>gi|336275783|ref|XP_003352645.1| hypothetical protein SMAC_01479 [Sordaria macrospora k-hell]
gi|380094535|emb|CCC07915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 357
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 172/426 (40%), Gaps = 107/426 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAK-DAVVQTHRDFIKAGADIVMTNSY 61
V+++DGG + L G PLWSS+ L + + D ++ H F KAGA+I+ T +Y
Sbjct: 7 VQILDGGLGTTLEDLHGITFSFETPLWSSHLLVSGEEDKLLDCHEAFQKAGANIISTATY 66
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVD-YVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Q SI GF + + K + ++ A+ L A A ++ +A ++GP
Sbjct: 67 QTSINGFAATKAPKSGAPDGIGKEGIPHFLNRAVVLAANAA-------GKEGKVALALGP 119
Query: 121 YGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
YGA++ +EY G Y H + EWH+ D +D + +
Sbjct: 120 YGATMIPSTEYSGKYDPGHQDARALEEWHKKRLD-----------------LFKDVNTNQ 162
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL- 238
+Y+ + PR+ +V A ++L+ + IP S LR P W+
Sbjct: 163 VNYIAFET--------VPRLDEIV-AIRNLLSTDKIPTS---------LRGRP---VWIS 201
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSSLIEQLKTENIPL 296
S DD+ + +G + +V R + +G+NC + + SL+ + + L
Sbjct: 202 SLYPNDDEKLPDGSTVEEVVRAALTRREGLETPWGIGINCTKVEKLDSLVRRYEAA---L 258
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN--SGE 354
++GE + +WP+ LV+YP+ +GE
Sbjct: 259 QSCIDNGEPM--------------------DWPS---------------LVLYPDGTNGE 283
Query: 355 RYDAVNARW----IDRDLCEPVDKYVTDWLDEGVA---------LVGGCCRTYAEDTLHM 401
Y+ +N W + P + +T+ + G A +VGGCC+T E +
Sbjct: 284 VYNTINKTWELPPGQKQPEAPWEVILTNVV--GAARQRGKWKSIIVGGCCKTSPELIRKL 341
Query: 402 KHRLDD 407
+ L D
Sbjct: 342 QKTLQD 347
>gi|322695297|gb|EFY87108.1| hypothetical protein MAC_06897 [Metarhizium acridum CQMa 102]
Length = 343
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 166/435 (38%), Gaps = 125/435 (28%)
Query: 1 MANVKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M + L+DGG + L Y PLWSS L + + +++ DF DI++T
Sbjct: 1 MKRILLLDGGLGTSLEQKYNLKFNSSKPLWSSDLLVSDPNTLLKCQSDFGAIPVDILLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ SI G AG+
Sbjct: 61 TYQVSIEG----------------------------------------------FAGTKS 74
Query: 120 PY---GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
P G S D ++ VE V+E E H + A S+GPYGA +
Sbjct: 75 PRFPDGISSLDIPQFLETAVE-VAENATREHHGTV----------ALSLGPYGACMIPSQ 123
Query: 177 EYRGDYVE-HVSEATMAEWHRPRIQAL-----VEAGADILAIETIPASKEAQMLCRLLRE 230
EY G Y + H S+ + +WHR R+Q + + +++ETIP + E + R L +
Sbjct: 124 EYSGKYDDAHNSQEALYDWHRERMQLFSRVQGLASRIGYISMETIPRADEIASMRRALDQ 183
Query: 231 WPHQKA---WLS-FSCKDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSS 284
P W+S D++ + +GES R ++ + + VG+NC + ++
Sbjct: 184 VPELAGVPFWMSCLYPGDNQRLPSGESPEAALRAMFDPRVAKSVPWGVGINCAKVWKLTP 243
Query: 285 LIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
L++Q ++ VV+ ++ T+P EWP
Sbjct: 244 LLKQYES-----VVH-----ALVQDGTLP-------------EWPA-------------- 266
Query: 345 PLVVYPN--SGERYDAVNARWIDRDLCEPVDKYV-TDWLDEGV-----------ALVGGC 390
LV+YP+ +GE Y+ V W D E V + + L E V +VGGC
Sbjct: 267 -LVLYPDGTNGEAYNTVTQEWEVADDAEDVTRVPWEEQLAEAVRGTEARGKWKQIVVGGC 325
Query: 391 CRTYAEDTLHMKHRL 405
C ++D ++ L
Sbjct: 326 CMASSQDIARLRQAL 340
>gi|67525841|ref|XP_660982.1| hypothetical protein AN3378.2 [Aspergillus nidulans FGSC A4]
gi|40744166|gb|EAA63346.1| hypothetical protein AN3378.2 [Aspergillus nidulans FGSC A4]
gi|259485636|tpe|CBF82826.1| TPA: homocysteine S-methyltransferase (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 355
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 171/435 (39%), Gaps = 116/435 (26%)
Query: 3 NVKLIDGGFSSQLSTYVGDII--DGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ L+DGG + L +Y +I PLWSS+ L ++ + HR F AGADI++T +
Sbjct: 2 KILLLDGGLGTTLESYPFNITFTSETPLWSSHLLISSPSTLQSAHRAFYDAGADILLTAT 61
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ+SI GF D+S+ I + DY++ AI L + G++ P
Sbjct: 62 YQSSIEGFAR-----TDASHT-INDAGDYMRSAIPL-----------------VRGAI-P 97
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD-GSEYR 179
A R + +A S+GPYGA++ +EY
Sbjct: 98 SSARQR-----------------------------PQQCRVALSLGPYGATMSPVAAEYT 128
Query: 180 GDYVEHV-SEATMAEWHRPRIQALVEA-----GADILAIETIPASKEAQMLCRLLRE--- 230
G Y + E + +WH R+ V+ D +A ET+ + E + +++
Sbjct: 129 GAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFETLIRADEVCAVRGAMKDVCV 188
Query: 231 ----WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD--QLIAVGVNCVRPLMVSS 284
+K W + + + Q P + +G+NC R V+
Sbjct: 189 GPEIHRRRKPWWICGVFPAEEVDRTQ-VRQWVDAAVGQRPGLPRPWGIGLNCTRIENVAK 247
Query: 285 LIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREW--PNQKAWLSFSCKTE 342
++ ++ E H L + KE + EW + K WL
Sbjct: 248 IVAIMRDEL-----------HCL----LSRGKEDG----FVDEWDAASGKPWL------- 281
Query: 343 NIPLVVYPNS--GERYDAVNARWIDRDLCE--PVDKYVTDWLD-------EGVALVGGCC 391
V+YP+ GE+YD V W+ R+ P D+ + D + EG+ +VGGCC
Sbjct: 282 ----VLYPDGTKGEKYDPVTKTWVARETVVRCPWDESLWDVVQGQSEGDWEGI-IVGGCC 336
Query: 392 RTYAEDTLHMKHRLD 406
R D ++ R+D
Sbjct: 337 RAGPADIAALRRRID 351
>gi|392865651|gb|EAS31457.2| hypothetical protein CIMG_11788 [Coccidioides immitis RS]
Length = 377
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 177/441 (40%), Gaps = 99/441 (22%)
Query: 1 MANVKLIDGGFSSQLS--TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+ N+ L+DG + L Y PLWSS+ L + + + HR ++ AGADIV+T
Sbjct: 5 IPNILLLDGAMGTVLEEPPYGFTFSAQTPLWSSHLLLSHPTTLSEIHRSYVDAGADIVLT 64
Query: 59 NSYQASIGGFMEFL-------------DLDYDSSYQLIKSSVDYVKEAIALEATHARIRS 105
+YQAS GF + D ++Y+ + ++ Y++ AI L + S
Sbjct: 65 ATYQASFEGFARTAIVPANVPADHKQDERDGHATYRPMDAT-RYMRSAIPLAYSSFNFSS 123
Query: 106 DDPARDILIAGSVGPYGASLRD-GSEYRGDYVEHVSE-ATMAEWHRLITDDPARDILIAG 163
P +A S+GPYGA++ +EY G Y E +S A + WH A
Sbjct: 124 KPPR----VALSLGPYGATMCPVSAEYTGIYPEEMSNTAALEAWH-------------AN 166
Query: 164 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQM 223
+ Y + D +R +E + T+ W + A+ A +L I S+
Sbjct: 167 RLKVY---MEDPETWRK--IEFLGFETVRRWD--EVLAIRGAMGKLLQIAESGQSR---- 215
Query: 224 LCRLLREWPHQKAWLS-FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMV 282
K W++ ++D + +T A + N + +GVNC R V
Sbjct: 216 -----------KWWITGVFPQEDIDEEDVRRWTSAAFGSTSENGLRPWGIGVNCTRLENV 264
Query: 283 SSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
+++ ++ E + N+GE ++ +S + R W
Sbjct: 265 ERIVDIMEDE-LGREKLTNNGERA----SVGSSWSS-------RPW-------------- 298
Query: 343 NIPLVVYPNS--GERYDAVNARWIDRD----------LCEPVDKYVTDWLDEGVALVGGC 390
LV+YP+ GE YD+ W+ +D C + ++ + LVGGC
Sbjct: 299 ---LVLYPDGTQGEIYDSTLKTWVKKDEEEITESWPERCWRIVNHIWNRNAWNGILVGGC 355
Query: 391 CRTYAEDTLHMKHRLDDWVSG 411
CRT D ++ R+D SG
Sbjct: 356 CRTRVHDIRALRDRIDSAWSG 376
>gi|169846893|ref|XP_001830160.1| homocysteine S-methyltransferase [Coprinopsis cinerea okayama7#130]
gi|116508743|gb|EAU91638.1| homocysteine S-methyltransferase [Coprinopsis cinerea okayama7#130]
Length = 355
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 74/331 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ ++DGG + L +GD + PLWS+ + + +V++THR+FI AGA I+ T +YQ
Sbjct: 5 KIAILDGGLGTHLENIIGDEVSKGPLWSTQAVISHPLSVLKTHRNFINAGATIIETATYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ G ++ +Y++ +L+ +V KEA A + S+GP+G
Sbjct: 65 ASLPGLIKSGLQEYEAR-ELMWKAVSLAKEAAADSDASIAL-------------SLGPFG 110
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL-----RDGSE 177
A+LR E+ G Y PYG +
Sbjct: 111 ATLRPTQEFEGFYPP-----------------------------PYGPKAYHPEGPNTQA 141
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCR---LLR 229
+ + E + +A++H R+ + A LA ET+ +E + + LLR
Sbjct: 142 FDSNEAEARAIGALAQFHLDRLLVFSQNSAVWDSIQYLAFETLLLPREVIAIRKAVGLLR 201
Query: 230 EWPHQKA-------WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV----- 277
++ W+SF D + S + + D A+G+NC
Sbjct: 202 THLFKEHRSFDKSWWISFVVPSD---ATNPSVLPLVSSALCEGHDLPSAIGINCTSFGTL 258
Query: 278 --RPLMVSSLIEQLKT-ENIPLVVYPNSGEH 305
R L + L+ + + + LV+YPN G +
Sbjct: 259 LPRTLELCRLVPRFRPLSQLGLVLYPNGGTY 289
>gi|156057753|ref|XP_001594800.1| hypothetical protein SS1G_04608 [Sclerotinia sclerotiorum 1980]
gi|154702393|gb|EDO02132.1| hypothetical protein SS1G_04608 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 369
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 164/453 (36%), Gaps = 143/453 (31%)
Query: 3 NVKLIDGGFSSQLS-TYVGDIIDGHPLWSSYFLAT----AKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L ++ + PLWSS L + ++ T + F+ AGADI++
Sbjct: 6 KIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPNTLLATQKSFVDAGADILL 65
Query: 58 TNSYQASIGGF--------------MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARI 103
T +YQAS GF E D D + ++++S+VD A + +
Sbjct: 66 TATYQASYEGFGRSGYAVHSHSSSGFEKEDGDKEEVNEIMRSAVDIASNAFS-------V 118
Query: 104 RSDDPARDILIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIA 162
+ D + IA S+G YGA + G EY G Y +H S ++ WH +RD
Sbjct: 119 KKDSNGK---IALSLGAYGAIMTPGQEYTGKYDDQHKSSEHLSSWHHERISVFSRD---- 171
Query: 163 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ 222
W R D +A ETIP +E +
Sbjct: 172 ----------------------------PKSWDR----------VDYVAFETIPLLEEIE 193
Query: 223 MLCRLLREWPHQKAWLSFS------C---KDDKHISNGESFTQVARTCYNMNPDQLI--A 271
+ + + E + S C + + +G S Q+ + + +
Sbjct: 194 GVRKSMGEIERSNGGKTGSKPFWVTCVFPGEGNGLPDGSSVQQIVQAMLSKKEGSPVPFG 253
Query: 272 VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ 331
VG+NC + V +LI + E L+ + + EWP+
Sbjct: 254 VGLNCTKVGKVEALILDFEREVRSLIEKGD-----------------------VSEWPS- 289
Query: 332 KAWLSFSCKTENIPLVVYPNS---GERYDAVNARWIDRDLCEPVDKYVTDWLDEGV---- 384
LVVYP+ GE Y+ W ++ EP K W DE V
Sbjct: 290 --------------LVVYPDGTIKGEVYNTSTKVW---EIREPPGKEDLQW-DEAVLEIV 331
Query: 385 -----------ALVGGCCRTYAEDTLHMKHRLD 406
+VGGCC+T + ++ R+D
Sbjct: 332 RRTRDRGLWKEIIVGGCCKTTPREIGKLRERID 364
>gi|313236014|emb|CBY11341.1| unnamed protein product [Oikopleura dioica]
Length = 148
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
VK+IDGG ++L +D H LWS+ D+VVQ H++FI AGAD++++N+YQ
Sbjct: 4 QVKVIDGGMGTELVRCGVQDVDKHKLWSALANVDFPDSVVQAHKNFIDAGADVIISNTYQ 63
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
++ M L + + + L+ +VD ++A E ++AGS+GP+
Sbjct: 64 SNQPLLMSELQISREEADNLLLKTVDLARKAAGSET--------------IVAGSIGPFP 109
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWH 148
SEY Y++ +S + WH
Sbjct: 110 DC--PASEYDPQYLKRMSFEELYNWH 133
>gi|50306329|ref|XP_453138.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642272|emb|CAH00234.1| KLLA0D01551p [Kluyveromyces lactis]
Length = 331
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 161/423 (38%), Gaps = 133/423 (31%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLA-------TAKDAVV--QTHRDFIKAGA 53
V ++DGG ++L ++ +P+WS+ F+ +KD ++ Q DFI+AGA
Sbjct: 16 VLVMDGGQGTELENRGINV--ANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGA 73
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDIL 113
DI+MT +YQ S + + P R +
Sbjct: 74 DILMTITYQTSF-----------------------------------KSVSENTPIRTL- 97
Query: 114 IAGSVGPYGASLRDGSEYRG--DYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
EY G D + S + + E LI G +G +GA
Sbjct: 98 ---------------EEYNGLLDRIVSFSRSCIGEDRYLI-----------GCIGAWGAH 131
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLRE 230
+ SE+ GDY H + E+ RP++ V++ DI+ ETIP E + +
Sbjct: 132 V--CSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHELRAILSWDET 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMN---PDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S + + +G S Q+A ++ L+ +G+NC ++E
Sbjct: 190 VLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIGINCCAFNQSHMILE 249
Query: 288 QLKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
L N+PL+VYPNSGE +T+ +K WL K EN
Sbjct: 250 SLHNSCPNMPLIVYPNSGE---IYDTV------------------KKIWL----KNEN-- 282
Query: 346 LVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
LC D V +++ G ++GGCCRT +D ++ +
Sbjct: 283 ---------------------QLCT-WDDVVKSYIENGARIIGGCCRTTVDDIKEVRLAV 320
Query: 406 DDW 408
+ +
Sbjct: 321 NKY 323
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 514 ISNGESFTQVARTCYNMN---PDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPNS 568
+ +G S Q+A ++ L+ +G+NC ++E L N+PL+VYPNS
Sbjct: 207 LRDGTSMQQIADLISSLGDKLNSNLMFIGINCCAFNQSHMILESLHNSCPNMPLIVYPNS 266
Query: 569 GERYD----FHLADEKNNCVKSDVT 589
GE YD L +E C DV
Sbjct: 267 GEIYDTVKKIWLKNENQLCTWDDVV 291
>gi|443899418|dbj|GAC76749.1| homocysteine S-methyltransferase [Pseudozyma antarctica T-34]
Length = 503
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 55/233 (23%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKD---------AVVQTHRDFIKAG 52
+ + ++DGG ++ L + + PLWS+ L +D + H +++AG
Sbjct: 81 SRIGVLDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSNGKGQKGIFDAHLHYLQAG 140
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
A I+ T++YQAS+ F E D +S+ +++ +VD +A EA + S + R
Sbjct: 141 AGIIGTSTYQASLESF-ERAQYDQESASRIMSKAVD-----LACEAVNTYNSSSNAVRP- 193
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
LI+ S+GPYGA L +G+EY GDY L DP R+
Sbjct: 194 LISLSLGPYGAMLSNGAEYTGDYRRTF----------LAESDPQRE-------------- 229
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA----DILAIETIPASKEA 221
+ S MA +H+ RI+A V + +LA+ET+P + EA
Sbjct: 230 -----------QQPSIEEMAAFHQRRIEAFVVQPSWKDVGVLAVETVPRADEA 271
>gi|389643936|ref|XP_003719600.1| homocysteine S-methyltransferase [Magnaporthe oryzae 70-15]
gi|351639369|gb|EHA47233.1| homocysteine S-methyltransferase [Magnaporthe oryzae 70-15]
Length = 380
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 176/454 (38%), Gaps = 121/454 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M+++K++DGG + L G + PLWSS L + ++ + R+F AGAD+++T
Sbjct: 1 MSDIKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ S+ F AR ++ + I + ++
Sbjct: 61 TYQVSVEAF--------------------------------ARTKTPEHPDGIAPSSAML 88
Query: 120 PYGASLRDGSEY--RGDYVEHVSEATMAEWHRLITDDPA-RDILIAGSVGPYGASLRDGS 176
PY LR E + + A A R T P+ + +A + GPYGA++ G
Sbjct: 89 PY---LRGAVEIAEKAAAAAAAAAAAAAAAPRNETSAPSPQPAELALACGPYGAAMTPGQ 145
Query: 177 EYRGDY-VEHVSEATMAEWHRPRIQALVEAGADI------LAIETIPASKEA----QMLC 225
EY G Y H + ++ WH R+ AG D+ +A ET+P E +
Sbjct: 146 EYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVPGRCAYVAFETVPNLAEVWAVRDAIT 205
Query: 226 RLLRE-----WPHQKAWLSFSCKDDKHISNGESFTQVARTCY-------NMNPDQLIA-- 271
RL ++ +P + +D+ +++G S QV N + +A
Sbjct: 206 RLRQDASCSRFPSRFWICCVFPHEDERLADGSSVDQVVEAMLAARGGGENGGAKESLALP 265
Query: 272 --VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWP 329
+G+NC + + LI+ + +I K ++
Sbjct: 266 WGIGINCTKIYKLEGLIKSFE-------------------RSISGLKAKGVIT------- 299
Query: 330 NQKAWLSFSCKTENIP-LVVYPN--SGERYDAVNARWIDRDLCE------PVD----KYV 376
N+P LV+YP+ +GE Y+ +W + + P D + V
Sbjct: 300 -------------NVPALVLYPDGTNGEVYNTTTQKWEAPQVVQGAGPKTPWDAQLTQIV 346
Query: 377 TDWLDEGV---ALVGGCCRTYAEDTLHMKHRLDD 407
D GV LVGGCC+ ++ +++RL +
Sbjct: 347 NDTKSRGVFTSFLVGGCCKANPQNIKDLRNRLKE 380
>gi|255949320|ref|XP_002565427.1| Pc22g15090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592444|emb|CAP98797.1| Pc22g15090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 345
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 57/295 (19%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
MA ++++DGG + L D PLW+S+ L + + RDF AG DI++T
Sbjct: 1 MATIQILDGGLGTSLGDLYNIKFDSKTTPLWASHLLVSDPATLQACQRDFGVAGVDILLT 60
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVD-YVKEAIALEATHARIRSDDPARDILIAGS 117
+YQ S GF + +++S+V ++++A+ + A A++R +A S
Sbjct: 61 ATYQVSAEGFARTKTAQFPDG--ILRSAVGPFLQKAVDI-AEQAKVRESAS-----VALS 112
Query: 118 VGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
+GPYGA + G EY G Y EH SE ++ WH LR +
Sbjct: 113 LGPYGACMIPGQEYSGAYDAEHDSEESLYLWHL--------------------DRLRMFA 152
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-K 235
E G+ V V +A ET+P E + + R +R +
Sbjct: 153 EADGELVSRVR---------------------YVAFETLPRLDEVRAVRRAIRASAFRVP 191
Query: 236 AWLS-FSCKDDKHISNGESFTQVARTCYNM--NPDQLIAVGVNCVRPLMVSSLIE 287
W++ +DD + +G S +V R D VG+NC + ++ L++
Sbjct: 192 FWIACVFPRDDDLLPDGSSVEEVVRAAVASMEGGDVPWGVGINCTKMHKLAGLVD 246
>gi|402079758|gb|EJT75023.1| homocysteine S-methyltransferase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 345
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
MA +K++DGG + L G D PLWSS L + ++ RDF AGAD+V+T
Sbjct: 1 MATIKILDGGLGTSLEDKYGVKFDHSRPLWSSDLLVSDPSTLLSCQRDFATAGADVVLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSY------QLIKSSVDYVKEAIALEATHARIRSDDPARDIL 113
+YQ S+ GF L++ S + ++++VD + A A A
Sbjct: 61 TYQVSLEGFAGTPTLEFPSGIPSGAVPRFLETAVDVAERAAAGAALAL------------ 108
Query: 114 IAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
S GPYGA + G EY G Y H EA +A WH
Sbjct: 109 ---SCGPYGACMVPGQEYSGRYDGAHDGEAALAAWH 141
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 28/167 (16%)
Query: 164 SVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRPRIQALVE------AGADI--LAIET 214
S GPYGA + G EY G Y H EA +A WH R++ E +G + +A ET
Sbjct: 109 SCGPYGACMVPGQEYSGRYDGAHDGEAALAAWHLERLRLYDESFLVSPSGPRLQYVAFET 168
Query: 215 IPASKEAQMLCRLLRE-----WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM--NPD 267
+P E + + + +P + DD+ + +G + Q
Sbjct: 169 LPRLDEIRAVRKAFAAVDGGVFPGRFWIACVFPGDDEKLPDGSTVEQAVEAMLGPLDGGS 228
Query: 268 QLIAVGVNCVRPLMVSSLIEQLK------------TENIPLVVYPNS 302
+ +G+NC + + L+++ + E LV+YP+
Sbjct: 229 KPWGIGINCTKLHKIQGLVKRFEDAVTGLVQRGVVKEAPALVLYPDG 275
>gi|171695692|ref|XP_001912770.1| hypothetical protein [Podospora anserina S mat+]
gi|170948088|emb|CAP60252.1| unnamed protein product [Podospora anserina S mat+]
Length = 371
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 160/439 (36%), Gaps = 138/439 (31%)
Query: 3 NVKLIDGGFSSQLSTYVG-DIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+K +DGG + L T G + PLWSS+ L T + F KAGAD++ T +Y
Sbjct: 17 TIKFLDGGLGTTLETIHGVKFSESTPLWSSHLLLTDLQTLADCQMSFAKAGADVITTATY 76
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
QASI GF ++ + L ++K+A+++ R R +A S+GPY
Sbjct: 77 QASINGFKNTKTENWPNGVPLPNIG-HFLKDAVSIA---RRAAGKVGGR---VALSLGPY 129
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
GA++ +EY G Y +P++DI+ D
Sbjct: 130 GATMIPSTEYTGHY----------------DIEPSQDIV--------------------D 153
Query: 182 YVEHVSEATMAEWHRPRIQALVEAG-----ADILAIETIPASKEAQMLCRLL-------- 228
+ H WH R V+ +A ETIP E + R L
Sbjct: 154 KLFH--------WHSERYNLYVQVPNLLFDVSYIAFETIPRLDEILAIRRFLNADISGGV 205
Query: 229 ----REWPHQ-KAWLS--FSCKDDKHISNGESF-----TQVARTCYNMNPDQLIAVGVNC 276
RE+ H W+S F DDK + +G S +++ + P VG+NC
Sbjct: 206 KLGPREFYHDIPVWISVLFPSDDDK-MPDGTSVEDAVAAMISKEFGSKTPQ---FVGINC 261
Query: 277 VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLS 336
+ + L+ Q A+E + A+ + +WP
Sbjct: 262 TQVSKLEGLVRQFTK----------------AVEKLVATGAVE-------KWPG------ 292
Query: 337 FSCKTENIPLVVYPNS---GERYDAVNARW---------------IDRDLCEPVDKYVTD 378
LV+YP+ GERY+ W +R L V K D
Sbjct: 293 ---------LVLYPDGTKVGERYNTATKEWEISGEGSKKTPEDVSWERQLAMVV-KEAYD 342
Query: 379 WLDEGVALVGGCCRTYAED 397
L+GGCCRT E+
Sbjct: 343 TGGWSSFLIGGCCRTTPEN 361
>gi|255720274|ref|XP_002556417.1| KLTH0H12716p [Lachancea thermotolerans]
gi|238942383|emb|CAR30555.1| KLTH0H12716p [Lachancea thermotolerans CBS 6340]
Length = 348
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 153/417 (36%), Gaps = 125/417 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATAK---DAVVQTHRDFIKAGADIVMT 58
N+ L+DGG ++L I HPLWS+ F+ K +A+ + +RDF +AG++ +MT
Sbjct: 12 NILLLDGGQGTELEKKGVSI--SHPLWSTLPFIIKNKTHLEAIKEMYRDFAEAGSNALMT 69
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQAS ++ S L+ S DY A L+ + D + GSV
Sbjct: 70 ITYQASFSSMKKY-------SEGLVNSEEDY---AAFLDYVIGFTDRECITPDKYLVGSV 119
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
GPY L +G+EY G Y E G +
Sbjct: 120 GPYAGLLSNGAEYSGYYGE-------------------------GKI------------- 141
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQML-----CRLLREWPH 233
D++++ S PRI D++ IETIP E + L RL P+
Sbjct: 142 --DFIDYYSPQVKHFALSPRI--------DLIGIETIPNIDEFKALLSPEFSRLSFSKPY 191
Query: 234 QKAWLSFSCKDDKHISNGESFTQVART---CYNMNPDQLIAVGVNCVRPLMVSSLIEQLK 290
++S + ++ + +G S ++ R ++ PD + +NCV L +++ L
Sbjct: 192 ---YISVTTDNNGCLRDGTSLNEICRAIKQSASLLPDNFVFFAINCVEFLHCVEILQSLN 248
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR---EWPNQKAWLSFSCKTENIPLV 347
E Q + R R +PN
Sbjct: 249 D-----------------------CLEMQGVDRRFRFRGAYPN----------------- 268
Query: 348 VYPNSGERYDAVNARWIDRDLCEPVDKY---VTDWLDEGVALVGGCCRTYAEDTLHM 401
SGE Y W P D + L + ++GGCCRT +E+ M
Sbjct: 269 ----SGEIYHGGTHSWSSNPYAGPEDTWENLTLGLLSQECLMLGGCCRTGSEEIRQM 321
>gi|410081184|ref|XP_003958172.1| hypothetical protein KAFR_0F04420 [Kazachstania africana CBS 2517]
gi|372464759|emb|CCF59037.1| hypothetical protein KAFR_0F04420 [Kazachstania africana CBS 2517]
Length = 326
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 117/292 (40%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDYV---EHVSEATMAEWHRLIT--DDPARDIL-----IAGSVGPYGAS 171
GA + + Y+ + E+ + T+ ++H L+ R+ + + GS+G Y A
Sbjct: 73 GADVLSTTTYQTSFASISENTNIQTLKDYHELLNRITKFTRECIGDSKYLVGSIGTYAAY 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
L +EY GD+ + + +P++ + DI+ ETIP E + + L ++
Sbjct: 133 L--SAEYTGDFGDAADTIDYHGYFKPQLDNFNRSTEIDIIGFETIPNIHELRAILSLNKK 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSSLI 286
+ ++S S + +G S V + +NP+ LI +G+NC+ L S L
Sbjct: 191 DLSKPFYISLSTNSKAQLRDGTSLKGVVDVIKSFESTLNPN-LILLGINCI-GLNSSHLT 248
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
+ ++P PL
Sbjct: 249 MEYLNNHLP-----------------------------------------------QFPL 261
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+VYPNSGE+YD V W+ D D + V +LD G +VGGCCRT D
Sbjct: 262 IVYPNSGEKYDPVRKIWLADEDPAFTWEYIVHRYLDAGARIVGGCCRTTPSD 313
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 530 MNPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPNSGERYD----FHLADE 579
+NP+ LI +G+NC+ +E L PL+VYPNSGE+YD LADE
Sbjct: 228 LNPN-LILLGINCIGLNSSHLTMEYLNNHLPQFPLIVYPNSGEKYDPVRKIWLADE 282
>gi|387219573|gb|AFJ69495.1| homocysteine S-methyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 145
Score = 76.3 bits (186), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 32/143 (22%)
Query: 193 EWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA----------WLSFSC 242
+WHRPR+ L E AD+LA ETIP E + +LLRE Q+ W++ +C
Sbjct: 2 DWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTSRRTPCWITLAC 61
Query: 243 KDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK--------- 290
+D H+++GES Q+ + + Q++ +GVNC P V + L+
Sbjct: 62 QDATHLNSGESLVSCVQLVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTISAA 121
Query: 291 ---------TENIPLVVYPNSGE 304
+E I L+ YPNSGE
Sbjct: 122 KEVISAAKGSERI-LIAYPNSGE 143
>gi|58260266|ref|XP_567543.1| homocysteine S-methyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116290|ref|XP_773099.1| hypothetical protein CNBJ0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255720|gb|EAL18452.1| hypothetical protein CNBJ0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229593|gb|AAW46026.1| homocysteine S-methyltransferase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 381
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 74/343 (21%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+N+ ++DGG + L + DI PLW S L T D + + H +++ GAD+V T +Y
Sbjct: 3 SNILVLDGGMGTTLESLGVDI--SSPLWGSEALRTNPDVIRKVHEGYVQGGADLVETATY 60
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIAL-----EATHARIRSDDPARDILIAG 116
Q + + L + + ++ S V V IA E + + + + ++ +L
Sbjct: 61 QLTPQNLCDHLHCPREEAECILCSGVKLVASCIASCSSRNEEHNTKSKGGNKSKVVL--- 117
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
S GPYG++L+ G EY G Y +T ++D
Sbjct: 118 SFGPYGSTLQPGQEYGGIYPPPFGPSTSTNAFPPDSND---------------------- 155
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCR---LL 228
E + +A H +++A+ GA + +A ETIP E + + R +L
Sbjct: 156 ------EEEAAIQALAYHHLDKLEAISHDGAAWREVEWIAFETIPVLHEVRGIRRAMAIL 209
Query: 229 RE--------------WPHQKAWLSFSCKDDKH---ISNGE--SFTQVARTCYNMNPDQL 269
R W +K W++ +H + +G S QV + ++ PD +
Sbjct: 210 RGKLSALYADGDNIDLWWEKKFWITSPFPMGQHPQLLPDGSHASIPQVIHSLFS-GPDPI 268
Query: 270 I-AVGVNCVRP----LMVSSLIEQLKTE---NIPLVVYPNSGE 304
+G+NC P + SS L E + +V+YP+ G+
Sbjct: 269 PNGIGINCTNPSYLHFLSSSFTSHLPFEFFGKVEMVIYPDGGQ 311
>gi|365987512|ref|XP_003670587.1| hypothetical protein NDAI_0F00250 [Naumovozyma dairenensis CBS 421]
gi|343769358|emb|CCD25344.1| hypothetical protein NDAI_0F00250 [Naumovozyma dairenensis CBS 421]
Length = 329
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 163/412 (39%), Gaps = 132/412 (32%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFL----------ATAKDAVVQTHRDFIKAGA 53
+ ++DGG ++L ++ +P+WS+ + ++ V Q DF++AGA
Sbjct: 17 ILILDGGQGTELENRGINV--ANPVWSTIPFVNDSFWSGQSSKDREIVKQMFNDFLEAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+I+MT +YQ S E ++ Y +L+ V++ ++ I +
Sbjct: 75 EILMTTTYQTSFKSVSENTNIKTLKEYDELLTRIVNFSRDCI--------------GENK 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ G +GP+GA + SE+ G+Y EH LI
Sbjct: 121 YLIGCIGPWGAHI--CSEFTGNYGEH---------PELI--------------------- 148
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEA-GADILAIETIPASKEAQMLCRLLREW 231
DY E+ +P++ V+ DI+ ETIP E + + +
Sbjct: 149 --------DYY---------EYFKPQLVNFVQNDDLDIIGFETIPNVYELKTILSWGTDI 191
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S ++ + +G + +QVA + +NP+ L+ +G+NCV +++
Sbjct: 192 LPKPFYIGLSVHENGVLRDGTTMSQVADIINSLSDKLNPN-LVLLGINCVSLAHSPDILD 250
Query: 288 QLKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
+ + ++PL+VYPNSGE +T+ +K WL
Sbjct: 251 SIHSNLPDLPLIVYPNSGE---VYDTV------------------KKIWL---------- 279
Query: 346 LVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
P + E Y W D+ V +L G ++GGCCRT D
Sbjct: 280 ----PPNDETY----MSW---------DEVVERYLKAGARIIGGCCRTTPND 314
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 514 ISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPN 567
+ +G + +QVA ++ NP+ L+ +G+NCV +++ + + ++PL+VYPN
Sbjct: 208 LRDGTTMSQVADIINSLSDKLNPN-LVLLGINCVSLAHSPDILDSIHSNLPDLPLIVYPN 266
Query: 568 SGERYD 573
SGE YD
Sbjct: 267 SGEVYD 272
>gi|358396515|gb|EHK45896.1| hypothetical protein TRIATDRAFT_292149 [Trichoderma atroviride IMI
206040]
Length = 342
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 157/420 (37%), Gaps = 111/420 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M +K++DGG + L I PLWSS+ L + ++Q +DF D+++T
Sbjct: 1 MPKIKILDGGLGTSLEQNHNIIFSSDTPLWSSHLLISDPSTLLQCQKDFGDVPVDVILTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ S+ GF D+ + +D + LE T +I D IA SVG
Sbjct: 61 TYQVSLHGFANTKTADF-------PNGIDASQVPQFLE-TAVKIAEDAKQPACAIALSVG 112
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
PYGA + EY G Y H S + WHR
Sbjct: 113 PYGACMVPSQEYSGRYDAAHDSGDALLAWHR----------------------------- 143
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
E + + + + R+Q +A+ET+P E + R L P L
Sbjct: 144 -----ERLEVFGLIKDVKQRVQ--------YIALETVPRLDEVISMRRALSAVPGLFPDL 190
Query: 239 SF--SC---KDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSSLIEQLKT 291
F SC +D+ I +G S V R + + + VG+NC + + SL+ + +
Sbjct: 191 PFWISCLFPNEDESIPDGSSPEDVIRAMLDPSLAAAVPWGVGINCTKVWKLDSLLRRYE- 249
Query: 292 ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN 351
A+ ++ + ++ +WP LV+YP+
Sbjct: 250 ----------------------AAIKSLLQEGVITDWPA---------------LVLYPD 272
Query: 352 --SGERYDAVNARW-----IDRDLCEPVDKYVTDWLDE-------GVALVGGCCRTYAED 397
+GE Y+ +W +R+ P +K +T+ + +VGGCC D
Sbjct: 273 GTNGEVYNTTTKQWELPEGAEREDGIPWEKQLTEVVRATEERGKWSQIIVGGCCMASPSD 332
>gi|392569691|gb|EIW62864.1| Homocysteine S-methyltransferase [Trametes versicolor FP-101664
SS1]
Length = 370
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 170/441 (38%), Gaps = 121/441 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG + L I H LWS+ + + ++ H F++AGAD+++T+SYQ
Sbjct: 11 QVLILDGGLGTTLEDVFHQDIS-HALWSAKPIDEDPEVIISAHLAFLRAGADVILTSSYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA--RDILIAGSVGP 120
+ F E D + +++ SV +EA R R + A RD+ IA S+GP
Sbjct: 70 CAYTTF-ERAGYTRDDARRIMLKSVQLAQEA------RRRFREETLATPRDVKIALSLGP 122
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
YGA L E+ G Y PYG L S+ +
Sbjct: 123 YGAMLYPAQEFDGFYPP-----------------------------PYGPVLSP-SQKKT 152
Query: 181 DYVEHVSEAT---------MAEWHRPRIQALV-EAGA----DILAIETIPASKEAQMLCR 226
+ E E T +A +H R+ +AG D +A ET+P +E + +
Sbjct: 153 NAFEDTPEGTAQEQAAIDELAAFHYERLCTFADDAGTWDVVDFVAFETVPLRREIYAIRK 212
Query: 227 LLREWPHQKA---WLSFSCKDDKH---ISNGESFTQV-ARTCYNMNPDQLIA--VGVNCV 277
+ + ++ W+S + +NGE T A + ++ ++ A G+NC
Sbjct: 213 AVACFGGERMKPWWISTDYPGGRFPETKANGEHLTATDAASAALLDGEETAAWGFGINCT 272
Query: 278 RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSF 337
+ +L+E EA+ + + E ++ W
Sbjct: 273 GLEFLPALLE-----------------------------EARAVAKKHLEKHGKRLW--- 300
Query: 338 SCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVT-------------DWLDEGV 384
LV+YPN G+ YD V W R+ K+ DW EGV
Sbjct: 301 --------LVLYPNRGDVYDPVTQSW--RESSGQGQKWAVGFGTVVLDAIAHGDW--EGV 348
Query: 385 ALVGGCCRTYAEDTLHMKHRL 405
+ GGCC+T ++ + + +
Sbjct: 349 -IAGGCCKTGPDEIVALAKEI 368
>gi|390363866|ref|XP_001180979.2| PREDICTED: homocysteine S-methyltransferase ybgG-like
[Strongylocentrotus purpuratus]
Length = 259
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 103/269 (38%), Gaps = 101/269 (37%)
Query: 157 RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEAT----------MAEWHRPRIQA---LV 203
R LIAGSVGPYGA L D SEY G+YV++++ T + + H +A +
Sbjct: 73 RKPLIAGSVGPYGACLLDFSEYHGNYVDNMTMETDKDPLWTSTYLLKNHNALRKAHLSFL 132
Query: 204 EAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN 263
E GAD++ L+ + +D HI +GESF +
Sbjct: 133 EHGADVI---------------------------LTGTYQDKSHIGHGESFAEAVSKVSA 165
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCR 323
+ Q++ VG NC+ V++L++ T
Sbjct: 166 CS--QVVGVGTNCIAAENVTALLQSASTSR------------------------------ 193
Query: 324 LLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLC-----EPVDKYVTD 378
N K P VVYPN A +WID +C + D +
Sbjct: 194 ------NGK------------PFVVYPN------APGEQWIDDSVCGKTAADEFDDLIPA 229
Query: 379 WLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W++ GV +GGCC T A D H+ + L +
Sbjct: 230 WIEAGVKYIGGCCGTSALDIKHIANLLTN 258
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
AS+ F + + + +LI+ + D ++A+ +S R LIAGSVGPYG
Sbjct: 29 ASLELFEKAAGIGAEEFSKLIQMACDIARQAVE---EFWEKQSQPGRRKPLIAGSVGPYG 85
Query: 123 ASLRDGSEYRGDYVEHVSEAT 143
A L D SEY G+YV++++ T
Sbjct: 86 ACLLDFSEYHGNYVDNMTMET 106
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPN 567
D HI +GESF + + Q++ VG NC+ V+ L++ T P VVYPN
Sbjct: 146 DKSHIGHGESFAEAVSKVSACS--QVVGVGTNCIAAENVTALLQSASTSRNGKPFVVYPN 203
Query: 568 S-GERY 572
+ GE++
Sbjct: 204 APGEQW 209
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 11 FSSQLSTYVGDII---DGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
FS YV ++ D PLW+S +L +A+ + H F++ GAD+++T +YQ
Sbjct: 91 FSEYHGNYVDNMTMETDKDPLWTSTYLLKNHNALRKAHLSFLEHGADVILTGTYQ 145
>gi|302420871|ref|XP_003008266.1| homocysteine S-methyltransferase [Verticillium albo-atrum VaMs.102]
gi|261353917|gb|EEY16345.1| homocysteine S-methyltransferase [Verticillium albo-atrum VaMs.102]
Length = 355
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 3 NVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V ++DGG + L G D PLWSS+ L + +D ++ +DF DI++T +Y
Sbjct: 8 KVLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDFGDVPVDIILTATY 67
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Q SI GF + K + Y ++AIA+ + + +A SVGPY
Sbjct: 68 QFSIHGFANTRTAQFPDGIDRTKIA-SYARDAIAIAHSAGKENGGQ------VALSVGPY 120
Query: 122 GASLRDGSEYRGDY-VEHVSEATMAEWH 148
GA + G EY G Y +EH + +A WH
Sbjct: 121 GACMIPGQEYTGKYDLEHDTPEDLAAWH 148
>gi|148231585|ref|NP_001089521.1| uncharacterized protein LOC734575 [Xenopus laevis]
gi|66911778|gb|AAH97785.1| MGC115492 protein [Xenopus laevis]
Length = 116
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
VK++ GG S++L G ++ G PLWS+ L T A+ H F+K+GA+++ T +YQA
Sbjct: 5 VKILSGGLSTELEN-AGFLLQGDPLWSARLLQTNPQAIKNVHTSFLKSGAEVLSTATYQA 63
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIA 95
S+ GF E L L D + +L V KEA A
Sbjct: 64 SVKGFQEHLGLSIDEAEELFHVGVRLAKEAAA 95
>gi|321263029|ref|XP_003196233.1| homocysteine S-methyltransferase [Cryptococcus gattii WM276]
gi|317462708|gb|ADV24446.1| homocysteine S-methyltransferase, putative [Cryptococcus gattii
WM276]
Length = 382
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 74/343 (21%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+N+ ++DGG + L + DI PLW S L T D + + + +++AGAD+V T +Y
Sbjct: 3 SNILILDGGMGTTLESLGADI--SSPLWGSEALRTNPDVIRKVYEGYVQAGADLVETATY 60
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARD--ILIAGSVG 119
Q + + L + + +++ S V V +IA ++ + D + + S G
Sbjct: 61 QLTPQNLCDHLHCSREEAERILCSGVKLVASSIASCSSRNQEHKDKDKGNNGSKVVLSFG 120
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
PYG++L+ G EY G Y PYG S + +
Sbjct: 121 PYGSTLQPGQEYGGIYPP-----------------------------PYGPSTSTNA-FP 150
Query: 180 GDYVEHVSEA--TMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCR---LLR 229
DY + EA +A H +++A+ A +A ETIP E + + R ++R
Sbjct: 151 PDYNDKEEEAIQALAYHHLDKLEAINHDEAAWREVGWIAFETIPVLHEVRGIRRAMGIMR 210
Query: 230 E--------------WPHQKAWLSFSCKDDKH---ISNGE--SFTQVARTCYNMNPDQLI 270
W +K W++ +H + +G S QV ++ PD +
Sbjct: 211 RKLPALYTGGDNGSLWWDKKFWITSPFPMGQHPQLLPDGSHASIPQVIDALFS-GPDPIP 269
Query: 271 -AVGVNCVRPLMVSSLIEQLKTENIP--------LVVYPNSGE 304
+G+NC P + SL L T ++P +V+YP+ G+
Sbjct: 270 NGIGINCANPSYLRSLT-SLFTSHLPFEFFGKVEMVIYPDGGQ 311
>gi|395332845|gb|EJF65223.1| Homocysteine S-methyltransferase [Dichomitus squalens LYAD-421 SS1]
Length = 384
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 163/426 (38%), Gaps = 107/426 (25%)
Query: 25 GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIK 84
G+PLWS+ + +A++ H F++AG D++ T++YQA+ + E + + +L+
Sbjct: 20 GYPLWSATPVDKDPEAIISAHLAFLRAGVDVITTSTYQAAYRTY-EIAGYSREDAKRLML 78
Query: 85 SSVDYVKEAIA--LEATHARIRSD-DPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE 141
+V EA L+ +D +P+R + IA S+GPYG +L E+ G Y
Sbjct: 79 EAVKLAIEAKRRYLQEIGQNGGTDAEPSRRVKIALSLGPYGGTLSPAQEFNGFYPPPFGP 138
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA 201
A S G + +++ +E + EA + E+H R++
Sbjct: 139 A---------------------SSGAFESNVFSDTEEGLKQLSMAIEA-LEEFHYERLEV 176
Query: 202 LVEAGA-----DILAIETIPASKEAQMLCRLLREWPHQKA------------------WL 238
E D +A ET+P +E + R + + K W+
Sbjct: 177 FAENREVWDEIDFVAFETVPLRREITGIRRAVAKLQKTKGLEQVARSGASEVNTMKRWWI 236
Query: 239 SFSCKDDKH----ISNGESFTQVARTCYNMNPDQLIAV----GVNCVRPLMVSSLIEQLK 290
S D ++ G++ + D+ ++V G+NC P + L++
Sbjct: 237 STVYPDGRYPEMKPGGGQATVAEVAEAALLGEDERLSVPWGFGINCTSPEFLPPLLQ--- 293
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
EA+ + R E K W LV+YP
Sbjct: 294 --------------------------EARDVARRSWELHGVKPW-----------LVLYP 316
Query: 351 NSGERYDAVNARWIDRD---------LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
N G+ Y+ W+ + LC V D + G+A VGGCC+T ++ +
Sbjct: 317 NGGDVYNPETHSWLGQREGVSGWATHLCAAVMDNARDGVWGGIA-VGGCCKTGPDEISEL 375
Query: 402 KHRLDD 407
++ L +
Sbjct: 376 RNELRN 381
>gi|405122623|gb|AFR97389.1| homocysteine S-methyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 381
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 64/338 (18%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+N+ ++DGG + L T DI LW S L T D + + H +++AGAD+V T +Y
Sbjct: 3 SNILVLDGGMGTTLETLGADISSA--LWGSEALRTNPDVIRKVHEGYVQAGADLVETATY 60
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEAT----HARI-RSDDPARDILIAG 116
Q + + L + + +++ S V I ++ H RI R + ++ +L
Sbjct: 61 QLTPQNLCDHLHCPREEAERILCSGVKLAASCITSCSSHNNEHNRIGRGSNNSKIVL--- 117
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
S GPYG++L+ G EY G Y +T ++D A+++ +
Sbjct: 118 SFGPYGSTLQPGQEYDGIYPPPFGPSTSTNAFPPDSNDDEE------------AAIQALA 165
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCR---LLRE--- 230
+ D +E +S A W + + +A ETIP E + + R +LR
Sbjct: 166 YHHLDKLEAISRDEAA-WRK----------VEWIAFETIPVLHEVRGIRRAMAILRRKLS 214
Query: 231 -----------WPHQKAWLSFSCKDDKH---ISNGE--SFTQVARTCYNMNPDQLI-AVG 273
W +K W++ +H + +G S QV ++ PD + +G
Sbjct: 215 ALYSGGDNMNLWWEKKFWITSPFPMGQHPQLLPDGSHASVPQVIHALFS-GPDPIPNGIG 273
Query: 274 VNCVRPLMVSSLIEQLKTE-------NIPLVVYPNSGE 304
+NC P + SL + + +V+YP+ G+
Sbjct: 274 INCTNPSYLHSLTSSFASHLPFEFFGKVEMVMYPDGGQ 311
>gi|367013957|ref|XP_003681478.1| hypothetical protein TDEL_0E00240 [Torulaspora delbrueckii]
gi|359749139|emb|CCE92267.1| hypothetical protein TDEL_0E00240 [Torulaspora delbrueckii]
Length = 328
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 162/412 (39%), Gaps = 133/412 (32%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
+ ++DGG +++ ++ +P+WSS F++ + + V + ++DF+ +G+
Sbjct: 16 ILVLDGGQGTEMENRGIEV--ANPVWSSIPFVSESFWTDEWSKERKIVEEIYKDFMSSGS 73
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARDI 112
D++MT +YQAS E +L S Y L+ V + + I E
Sbjct: 74 DMLMTVTYQASFKAIAENTELQTLSEYNSLLDRIVAFSRRCIGDER-------------- 119
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ GSVGP+ A + SEY GDY H A S+ YG
Sbjct: 120 YLVGSVGPWAA--YNASEYTGDYGLH-----------------------ADSIDYYG--- 151
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLREW 231
+++P++ + D++ IET+P E + + +
Sbjct: 152 ---------------------YYKPQLDNFNKQEEIDMIGIETVPNFHELKAILSWDEKK 190
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVAR--TCY--NMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++S + D + +G + +A+ C N+NP+ ++ +G+NCV ++E
Sbjct: 191 IAKPFYVSLTTHDSGVLRDGTAMEDIAQYIKCLGNNLNPNFML-LGINCVSFNDSRDILE 249
Query: 288 QLKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
L + L+ YPNSGE + E P +K WL+ CKT
Sbjct: 250 LLHNALPEMLLLAYPNSGE--------------------VYE-PKKKIWLANKCKT---- 284
Query: 346 LVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
W D V +++ G ++GGCCRT +D
Sbjct: 285 ---------------TSW---------DSVVKSFINSGARIIGGCCRTSPQD 312
>gi|422294116|gb|EKU21416.1| homocysteine S-methyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 155
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 32/145 (22%)
Query: 191 MAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA----------WLSF 240
+ +WHRPR+ L E AD+LA ETIP E + +LLRE Q+ W++
Sbjct: 10 LMDWHRPRLAILGETDADLLAFETIPCQAEVVAILQLLREGREQEGSAPTSRRTPCWITL 69
Query: 241 SCKDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK------- 290
+C+D H+++GES Q+ + + Q++ +GVNC P V + L+
Sbjct: 70 ACQDATHLNSGESLVSCVQLVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREGLLTIS 129
Query: 291 -----------TENIPLVVYPNSGE 304
+E I L+ YPNSGE
Sbjct: 130 AAKEVISAAKGSERI-LIAYPNSGE 153
>gi|228912429|ref|ZP_04076112.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
gi|228847210|gb|EEM92181.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
Length = 140
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 58/185 (31%)
Query: 228 LREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+RE+P AWLSFS K++K IS G + AR +Q++A+G+NC +V+ I+
Sbjct: 1 MREFPETYAWLSFSLKNEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQ 58
Query: 288 QLKTENI--PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
+L+ NI P++VYPNSGE
Sbjct: 59 ELRA-NIKKPIIVYPNSGE----------------------------------------- 76
Query: 346 LVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
Y+ W + C +D +W G L+GGCCRT H++
Sbjct: 77 ---------TYNPETKTWHGHEQCNTLDIQSEEWYQAGARLIGGCCRT---TPYHIEEIS 124
Query: 406 DDWVS 410
+ W S
Sbjct: 125 NKWRS 129
Score = 47.8 bits (112), Expect = 0.017, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 494 TYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIE 553
TYA + +K ++K IS G + AR +Q++A+G+NC +V+ I+
Sbjct: 7 TYAWLSFSLK------NEKEISEGMKLVECARVF--EKSEQIVAIGINCAPVTVVTGAIQ 58
Query: 554 QLKTENI--PLVVYPNSGERYD 573
+L+ NI P++VYPNSGE Y+
Sbjct: 59 ELRA-NIKKPIIVYPNSGETYN 79
>gi|388853048|emb|CCF53222.1| related to homocysteine S-methyltransferase [Ustilago hordei]
Length = 442
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 161/431 (37%), Gaps = 138/431 (32%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKD---------AVVQTHRDFIKAG 52
+ + ++DGG ++ L + + PLWS+ L +D + H +++AG
Sbjct: 17 SRIGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFDAHLHYLQAG 76
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
A I+ T +YQAS F + D S+ LI +VD A+ T+ + S +
Sbjct: 77 AGIIGTATYQASQESFAR-ANYDEASASHLISKAVDLACHALH---TYNNVNSAASSSRP 132
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+I+ S+GPYG L +G+EY GDY L DP R+
Sbjct: 133 VISLSLGPYGGMLSNGAEYTGDYRRTF----------LPESDPRRE-------------- 168
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA----DILAIETIPASKEAQMLCRLL 228
+ S MA +H+ RI+A V + +LA+ET+P + EA + R+
Sbjct: 169 -----------QQPSLEEMAAFHQRRIEAFVAQPSWKDVGVLAVETVPRADEA-LAFRMA 216
Query: 229 RE---WPHQK---------AWLSFSCKDDKHI----------SNGES------------- 253
E HQ+ ++S + DD+ + SN +
Sbjct: 217 LENVVKSHQQQGKPLERKPVYISMAYPDDRRLPWPPVSSRSTSNDDDDVDMDEDDDEDAA 276
Query: 254 ------------FTQVARTCYNMNPDQL---IAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
Q+ + D L +G+NC +P ++ L+E++
Sbjct: 277 DDEGAVQEEMNWLVQIVTDTQVQDQDSLWPVSGIGINCTKPYLLEKLVERMSAS------ 330
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI----PLV-VYPNSG 353
L + PAS+ L C+ + PL+ +YP+ G
Sbjct: 331 --------LVVLNKPASEGG----------------LDLECRRSGVGLQKPLLFLYPDGG 366
Query: 354 ERYDAVNARWI 364
YDAV W+
Sbjct: 367 LVYDAVRKVWL 377
>gi|324520873|gb|ADY47731.1| Homocysteine S-methyltransferase 3 [Ascaris suum]
Length = 122
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 209 ILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQVARTCYNMNPD 267
+LA ETIPA KE + + L P K W+SFSC+D ++ ESF +V +P
Sbjct: 1 MLAFETIPAEKEGIAILKALDLLPANVKCWISFSCRDGTQTNHCESFAKVVSEV-TKHP- 58
Query: 268 QLIAVGVNCVRPLMVSSLIEQLKTE--NIPLVVYPNSGE 304
++IAVG+NC P +SSL+ K+ P VVYPNSGE
Sbjct: 59 KVIAVGINCTPPKYISSLLRSAKSSCNGKPFVVYPNSGE 97
Score = 44.7 bits (104), Expect = 0.13, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPN 567
D ++ ESF +V +P ++IAVG+NC P +S L+ K+ P VVYPN
Sbjct: 37 DGTQTNHCESFAKVVSEV-TKHP-KVIAVGINCTPPKYISSLLRSAKSSCNGKPFVVYPN 94
Query: 568 SGERYD 573
SGE Y+
Sbjct: 95 SGETYN 100
>gi|346977953|gb|EGY21405.1| homocysteine S-methyltransferase [Verticillium dahliae VdLs.17]
Length = 355
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 4 VKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG + L G D PLWSS+ L + +D ++ +DF DI++T +YQ
Sbjct: 9 VLILDGGLGTSLGDKYGVRFDKSTPLWSSHMLVSDQDTLLACQKDFGDVPVDIILTATYQ 68
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
SI GF + K + Y ++AIA+ + + A +A SVGPYG
Sbjct: 69 FSIHGFANTRTAHFPDGIDRTKIA-SYARDAIAIAHSAGK------ANGGQVALSVGPYG 121
Query: 123 ASLRDGSEYRGDY-VEHVSEATMAEWH 148
A + G EY G Y EH + +A WH
Sbjct: 122 ACMIPGQEYTGKYDPEHDTPEDLAAWH 148
>gi|449018235|dbj|BAM81637.1| probable homocysteine S-methyltransferase [Cyanidioschyzon merolae
strain 10D]
Length = 408
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 159/427 (37%), Gaps = 110/427 (25%)
Query: 6 LIDGGFSSQLSTYVGDI--IDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
++DGGF++++ D+ W++ L A V + HR +++AGA+I+ + SYQA
Sbjct: 37 ILDGGFATEIERLGHDLSTTATQGEWAAAVLHKAPHDVQRVHRRYLEAGAEILTSASYQA 96
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
S+ ++ +++ S+D R D A +L A S+GP A
Sbjct: 97 SMASI--------PTAVEVLARSLD---------------RLDTQASYVLRAVSLGPLAA 133
Query: 124 SLRDGSEYRG----DYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS-------L 172
L G EYRG + EA + R + IA V P+ A
Sbjct: 134 RLGGGLEYRGYADTELFAAGDEAARETFRRY------HEPRIAACV-PFFAENSNDRDLT 186
Query: 173 RDGSEYRGDYV--EHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE 230
DG+ R D++ E V +A A + E E IP + Q CRL
Sbjct: 187 GDGTVPRADFILFETVPDALEA-------TCISELMTSDTRFENIPWAISLQ--CRLASS 237
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVAR----TCYNMNPDQ-----LIAVGVNCVRPLM 281
P S C + ++ G V + + +P+ + +G NC P +
Sbjct: 238 SPPLAPESSERCTNMPQLAGGGPVPSVVEELLVSSFGPDPESGTRNGPLFIGFNCCPPWL 297
Query: 282 VSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR--------EWPNQKA 333
+ ++E L+ PL +++ +L R L +W N
Sbjct: 298 IRPILESLQRCRHPL------------------ARQCAILSRTLERTEVRSADKWANFAG 339
Query: 334 WLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDK--------YVTDWLDEGVA 385
W VYPNSGE +D W R +D +V W G
Sbjct: 340 W------------AVYPNSGEMWDPGTQTW-GRPSASTLDPENDAFWQYHVPVWSALGAT 386
Query: 386 LVGGCCR 392
++GGCCR
Sbjct: 387 IIGGCCR 393
>gi|363752483|ref|XP_003646458.1| hypothetical protein Ecym_4612 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890093|gb|AET39641.1| hypothetical protein Ecym_4612 [Eremothecium cymbalariae
DBVPG#7215]
Length = 326
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 77/316 (24%)
Query: 105 SDDPARD-ILIAGSVGPY---GASLRDGSEYRGDYVEHVSE----ATMAEWHRLITDDPA 156
SD +RD ++AG Y GA+L Y+ + + VSE T+ E+++L+ A
Sbjct: 52 SDRSSRDRQIVAGMFEEYIAAGANLLMTITYQSSF-KSVSENTDIKTLEEYNQLLDRIVA 110
Query: 157 -------RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGAD 208
D + G +G +GA + +E+ GDY EH ++ RP++ ++ D
Sbjct: 111 FSRTCIGADNYLVGCIGSWGAHI--CAEFSGDYGEHPERIPYLDYFRPQLNNFNLQEDID 168
Query: 209 ILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM---- 264
++ ETIP E + + ++ S + + +G + +QVA+ ++
Sbjct: 169 VIGFETIPNIHELTAILSWDESIIKKPFYIGMSVHEHGTLRDGTTMSQVAQLFRSLGKKL 228
Query: 265 NPDQLIAVGVNCVRPLMVSSLIEQLKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLC 322
NP+ +A+G+NC ++E L E IPL+ YPNSGE
Sbjct: 229 NPN-FLALGINCCSFRYSHMILESLHEELPYIPLIAYPNSGE------------------ 269
Query: 323 RLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPV-DKYVTDWLD 381
YD V W+ + C D+ V +L
Sbjct: 270 --------------------------------LYDTVKKIWLKNENCIVTWDEIVKSYLQ 297
Query: 382 EGVALVGGCCRTYAED 397
G ++GGCCRT D
Sbjct: 298 SGARIIGGCCRTTPND 313
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 514 ISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPN 567
+ +G + +QVA+ ++ NP+ +A+G+NC ++E L E IPL+ YPN
Sbjct: 208 LRDGTTMSQVAQLFRSLGKKLNPN-FLALGINCCSFRYSHMILESLHEELPYIPLIAYPN 266
Query: 568 SGERYD 573
SGE YD
Sbjct: 267 SGELYD 272
>gi|308489760|ref|XP_003107073.1| hypothetical protein CRE_17193 [Caenorhabditis remanei]
gi|308252961|gb|EFO96913.1| hypothetical protein CRE_17193 [Caenorhabditis remanei]
Length = 302
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 163 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADI--LAIETIPASKE 220
GSVG D SEY G Y+++ A + I L + + L ETIP + E
Sbjct: 105 GSVGTLATLYHDMSEYNGKYMDNEDAENTARNYYQTILTLFQTKTKVRNLVFETIPLAVE 164
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCV 277
M L+ +P +A +SF+ K++ + +GE +A R C Q++ +G+NC
Sbjct: 165 GLMALEALKRFPEMRAVMSFTFKENACLRHGEEIDTLAGELRKC-----SQIVGMGINCT 219
Query: 278 RPLMVSSLIEQLKTENIPLV-VYPNSGE 304
P V ++ +K N P V VYPN G+
Sbjct: 220 DPENVLPALKVIKKHNFPEVFVYPNMGD 247
>gi|227505425|ref|ZP_03935474.1| homocysteine methyltransferase [Corynebacterium striatum ATCC 6940]
gi|227197968|gb|EEI78016.1| homocysteine methyltransferase [Corynebacterium striatum ATCC 6940]
Length = 295
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 116/302 (38%), Gaps = 80/302 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+ DGG + L + G+ I G LWS+ L + H DF +AGA + T SYQ +
Sbjct: 19 IFDGGLGTHLESR-GNDISGQ-LWSAQILRENPAEIQAAHEDFYRAGAQVATTASYQVT- 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
D D + +L++ SV+ AR+ +++ D L+A SVGPYGA
Sbjct: 76 ------FDALGDEAEELLRRSVEV-----------ARVAANNARPDGLVAASVGPYGAGP 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+G++Y G Y E + WH+
Sbjct: 119 GEGTDYDGAYGLGCEE--LKHWHQR----------------------------------- 141
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIP--ASKEAQMLCRLLREWPHQKAWLSFSCK 243
RI+ L AD L ETIP A + P+ +
Sbjct: 142 ------------RIEVLAATDADFLLAETIPNVDEAAALLELLDATGKPYALSVTGVLAA 189
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNS 302
D ++ F + AR L A+GVNC ++++++ ++P++ YPNS
Sbjct: 190 DPAKVAQVIEFAKQARN--------LGALGVNCCDAETAKGVVKRMREGIDLPVLAYPNS 241
Query: 303 GE 304
GE
Sbjct: 242 GE 243
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 117/305 (38%), Gaps = 69/305 (22%)
Query: 101 ARIRSDDPAR------DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDD 154
A+I ++PA D AG+ AS + + GD E + ++ E R+ ++
Sbjct: 42 AQILRENPAEIQAAHEDFYRAGAQVATTASYQVTFDALGDEAEELLRRSV-EVARVAANN 100
Query: 155 PARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIET 214
D L+A SVGPYGA +G++Y G Y E + WH+ RI+ L AD L ET
Sbjct: 101 ARPDGLVAASVGPYGAGPGEGTDYDGAYGLGCEE--LKHWHQRRIEVLAATDADFLLAET 158
Query: 215 IP--ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAV 272
IP A + P+ + D ++ F + AR L A+
Sbjct: 159 IPNVDEAAALLELLDATGKPYALSVTGVLAADPAKVAQVIEFAKQARN--------LGAL 210
Query: 273 GVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK 332
GVNC ++++++ E I
Sbjct: 211 GVNCCDAETAKGVVKRMR-EGI-------------------------------------- 231
Query: 333 AWLSFSCKTENIPLVVYPNSGERYDAVNARW-IDRDLCEPVDKYVTDWLDEGVALVGGCC 391
++P++ YPNSGE +D +W D + + + GV L+GGCC
Sbjct: 232 ----------DLPVLAYPNSGETWDHAARQWRRDEEHSLGLVEAAPQLRALGVTLLGGCC 281
Query: 392 RTYAE 396
RT E
Sbjct: 282 RTTPE 286
>gi|71006536|ref|XP_757934.1| hypothetical protein UM01787.1 [Ustilago maydis 521]
gi|46097252|gb|EAK82485.1| hypothetical protein UM01787.1 [Ustilago maydis 521]
Length = 448
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 166/437 (37%), Gaps = 145/437 (33%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIID----GHPLWSSYFLATAKD---------AVVQTHRDF 48
A + ++DGG L+TY+ D +D PLWS+ L +D + H +
Sbjct: 17 ARIGILDGG----LATYLEDGLDFDLSKGPLWSARLLDEKEDDVSDGKGQKGIFDAHLHY 72
Query: 49 IKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHAR------ 102
++AGA I+ T +YQAS+ F + D S+ L+ +VD +A +A HA
Sbjct: 73 LQAGAGIIGTATYQASLESFAR-ANYDQVSASHLMSKAVD-----LACDALHAHNISNNK 126
Query: 103 --IRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDIL 160
+ S AR +L + S+GPYGA L +G+EY GDY L DP R+
Sbjct: 127 VGVASAASARPLL-SLSLGPYGAMLSNGAEYTGDYRRTF----------LAESDPLRE-- 173
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA----DILAIETIP 216
+ S M +H+ RI+A + + +LA+ET+P
Sbjct: 174 -----------------------QQPSLEEMMAFHQRRIEAFIAQPSWEHVGVLAVETVP 210
Query: 217 ASKEA-------QMLCRLL----REWPHQKAWLSFSCKDDKHI---------SNGES--- 253
+ EA + + R L R + ++S + DD+ + + G+
Sbjct: 211 RADEALAFRMALENVARSLEQQGRPLERKPVYISMAFPDDRRLPWPPVKKSSAAGQEGDV 270
Query: 254 -----------------------FTQVARTCYNMNPDQL---IAVGVNCVRPLMVSSLIE 287
Q+ D L +G+NC +P ++ L+E
Sbjct: 271 DMDEDNDEDEVEDEEAIQEEMNWLVQIVTDTQVQGQDSLWPISGIGINCTKPYLLPKLVE 330
Query: 288 QLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLV 347
++ + L +PAS+ L +++ L L
Sbjct: 331 RMSASLVTL--------------NLPASEGGMDL-------ESRRGALGLPKPL----LF 365
Query: 348 VYPNSGERYDAVNARWI 364
+YP+ G YDAV W+
Sbjct: 366 LYPDGGLVYDAVRKIWL 382
>gi|440469328|gb|ELQ38443.1| homocysteine S-methyltransferase [Magnaporthe oryzae Y34]
gi|440482124|gb|ELQ62642.1| homocysteine S-methyltransferase [Magnaporthe oryzae P131]
Length = 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 140/344 (40%), Gaps = 78/344 (22%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M+++K++DGG + L G + PLWSS L + ++ + R+F AGAD+++T
Sbjct: 1 MSDIKILDGGLGTTLEDRFGVVFTHAKPLWSSDLLVSDQETLQACQREFAAAGADVLLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ S+ F AR ++ + I + ++
Sbjct: 61 TYQVSVEAF--------------------------------ARTKTPEHPDGIAPSSAML 88
Query: 120 PYGASLRDGSEY--RGDYVEHVSEATMAEWHRLITDDPA-RDILIAGSVGPYGASLRDGS 176
PY LR E + + A A R T P+ + +A + GPYGA++ G
Sbjct: 89 PY---LRGAVEIAEKAAAAAAAAAAAAAAAPRNETSAPSPQPAELALACGPYGAAMTPGQ 145
Query: 177 EYRGDY-VEHVSEATMAEWHRPRIQALVEAGADI------LAIETIPASKEA----QMLC 225
EY G Y H + ++ WH R+ AG D+ +A ET+P E +
Sbjct: 146 EYTGAYDAAHSTPDALSRWHLDRLALYAAAGEDVPGRCAYVAFETVPNLAEVWAVRDAIT 205
Query: 226 RLLRE-----WPHQKAWLSFSCKDDKHISNGESFTQVARTCY-------NMNPDQLIA-- 271
RL ++ +P + +D+ +++G S QV N + +A
Sbjct: 206 RLRQDASCSRFPSRFWICCVFPHEDERLADGSSVDQVVEAMLAARGGGENGGAKESLALP 265
Query: 272 --VGVNCVRPLMVSSLIEQLKTE-----------NIP-LVVYPN 301
+G+NC + + LI+ + N+P LV+YP+
Sbjct: 266 WGIGINCTKIYKLEGLIKSFERSISGLKAKGVITNVPALVLYPD 309
>gi|261326041|emb|CBH08867.1| homocysteine S-methyltransferase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 433
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 137/325 (42%), Gaps = 72/325 (22%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
+WS+ L T ++ V H+ ++ GAD+++TN+YQ G + + +++ ++V
Sbjct: 48 MWSTSALITDEEIVRYVHKSYLDVGADVILTNTYQMHAAGCAQ----AGVTMNEVVNTAV 103
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
+ + I E A + A+ ++ + R ++V+ A
Sbjct: 104 RVLCDGITPERAAATKEAKVWAQHVM---------------NNKRSEFVD-----VFAPL 143
Query: 148 HRLITDDPAR-DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-- 204
DD ++ +L+ GS+G YGASL + EYRG+Y V+E + +++ R A V
Sbjct: 144 FYGPRDDASKCPVLVGGSLGSYGASLGNAQEYRGEY--EVNEDIIRDYYVGRFMAFVNHV 201
Query: 205 ------AGADILAIETIPASKEA---------QMLCRLLREWPHQKAWLS---------- 239
D + IETIP EA Q LR P +++S
Sbjct: 202 DEKEAHLKVDFIMIETIPLLNEAIEIFTWLKYQKEDETLRSAPVCLSFISCLREPRPDVT 261
Query: 240 ----------FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL----MVSSL 285
+ + + + +G +F + + + QL+ G NC PL + S+
Sbjct: 262 VDDATLNEWWLAAESNIRLIDGNTFEKAFNSLMELQLPQLVGFGTNCCSPLEASVVASAF 321
Query: 286 IEQLKTE----NIPLVVYPNSGEHI 306
+++ K + ++ L +Y NSGE+
Sbjct: 322 LKKKKHKVTDPSLALFLYSNSGENF 346
>gi|343428478|emb|CBQ72008.1| related to homocysteine S-methyltransferase [Sporisorium reilianum
SRZ2]
Length = 445
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 50/231 (21%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKD---------AVVQTHRDFIKAGAD 54
+ ++DGG ++ L + + PLWS+ L +D + H +++AGA
Sbjct: 19 IGILDGGLATYLEDGLNFDLSKGPLWSARLLDEKEDDVSGGKGQKGIFDAHLHYLQAGAG 78
Query: 55 IVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
I+ T +YQAS+ F + D S+ L+ +VD +A+ + S R LI
Sbjct: 79 IIGTATYQASLESFAR-ANYDQASASHLMSKAVDLACQALHSHNNTSNAASTSNGRP-LI 136
Query: 115 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
+ S+GPYGA L +G+EY GDY L DP R+
Sbjct: 137 SLSLGPYGAMLSNGAEYTGDYRRTF----------LPEFDPQRE---------------- 170
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA----DILAIETIPASKEA 221
+ S MA +H+ RI+A V + +LA+ET+P + EA
Sbjct: 171 ---------QQPSLDEMAAFHQRRIEAFVAQPSWQHVGVLAVETVPRADEA 212
>gi|425773813|gb|EKV12139.1| Homocysteine S-methyltransferase, putative [Penicillium digitatum
Pd1]
gi|425776077|gb|EKV14312.1| Homocysteine S-methyltransferase, putative [Penicillium digitatum
PHI26]
Length = 341
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
MA ++++DGG + L D PLW+S+ L + + + RDF AG D+++T
Sbjct: 1 MATIQILDGGLGTSLGDLYNIKFDSRTTPLWASHLLVSDPETLQACQRDFGVAGVDVLLT 60
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVD-YVKEAIALEATHARIRSDDPARDILIAGS 117
+YQ S GF + + +S+V ++++A+ + A A++R +A S
Sbjct: 61 ATYQVSAEGFSRTKTPQFPDG--IPRSAVGPFLQKAVDI-AEQAKVRESAS-----VALS 112
Query: 118 VGPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
+GPYGA + G EY G Y EH SE ++ WH
Sbjct: 113 LGPYGACMIPGQEYSGAYDAEHDSEESLYLWH 144
>gi|403161817|ref|XP_003322130.2| hypothetical protein PGTG_03667 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171939|gb|EFP77711.2| hypothetical protein PGTG_03667 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 370
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 153/417 (36%), Gaps = 115/417 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ L+DGG + L G + LWSS L + + H + +AGA I+ T SYQA
Sbjct: 14 IVLMDGGSGTTLEDEFGCRLKSQ-LWSSELLLNRPEILSSLHHAWEQAGAQIISTASYQA 72
Query: 64 SIGGFMEFL-----------DLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
++ GF L D+ D S QL++ SV ++ +L ++AR
Sbjct: 73 TLEGFRSLLSQSSRGETEEKDVGSDVSLQLLRRSVALARD--SLSGSNAR---------- 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWH--RLITDDPARDILIAGSVGPYG 169
+A S+GPYGA+L G EY G Y + SE + +H RL+
Sbjct: 121 -VALSLGPYGATLTPGQEYSGCYPAPYDSEEKLVNFHFDRLM------------------ 161
Query: 170 ASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLR 229
DY E S W + DI+ ET+P EA+ +
Sbjct: 162 -----------DYAEDYS-----TWEK----------VDIVLFETVPNLTEARAI----- 190
Query: 230 EWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL 289
++AW F + H + R+ NPD + +P ++ S +
Sbjct: 191 ----RRAWKKF--ERTLH-------ALIRRSATGANPD-------SSSKPWVI-SFVFPT 229
Query: 290 KTENIPLVVYPNSGEHILAI-----ETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
T P P+ I E S +L P +AW + +
Sbjct: 230 STGQFPTGENPSQVLQAALITDADAELAEPSGVGVNCTKLGNLQPILEAWRTSAVDHSKT 289
Query: 345 PLVVYPNSGERYDAVNARWID---------RDLCEPVDKYVTDWLDEGVALVGGCCR 392
L +YP+ G YD+VN W L + W G+ L GGCC+
Sbjct: 290 WLWLYPDGGPTYDSVNRSWTGSPITHQEWANQLFTIASNFSASW--AGIVL-GGCCK 343
>gi|115504073|ref|XP_001218829.1| homocysteine S-methyltransferase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|83642311|emb|CAJ16076.1| homocysteine S-methyltransferase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 433
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 72/325 (22%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
+WS+ L T ++ V H+ ++ GAD+++TN+YQ G + + +++ ++V
Sbjct: 48 MWSTSALITDEEIVRYVHKSYLDVGADVILTNTYQMHAAGCAQ----AGVTMNEVVNTAV 103
Query: 88 DYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 147
+ + I E A + A+ ++ + R ++V A
Sbjct: 104 RVLCDGITPERAAATKEAKVWAQHVM---------------NNKRSEFVN-----VFAPL 143
Query: 148 HRLITDDPAR-DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-- 204
DD ++ +L+ GS+G YGASL + EYRG+Y V+E + +++ R A V
Sbjct: 144 FYGPRDDASKCPVLVGGSLGSYGASLGNAQEYRGEY--EVNEDIIRDYYVGRFMAFVNHV 201
Query: 205 ------AGADILAIETIPASKEA---------QMLCRLLREWPHQKAWLS---------- 239
D + IETIP EA Q LR P +++S
Sbjct: 202 DEKEAHLKVDFIMIETIPLLNEAIEIFTWLKYQKEDETLRSAPVCLSFISCLREPRPDVT 261
Query: 240 ----------FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL----MVSSL 285
+ + + + +G +F + + + QL+ G NC PL + S+
Sbjct: 262 VDDATLNEWWLAAESNIRLIDGNTFEKAFNSLMELQLPQLVGFGTNCCSPLEASVVASAF 321
Query: 286 IEQLKTE----NIPLVVYPNSGEHI 306
+++ K + ++ L +Y NSGE+
Sbjct: 322 LKKKKHKVTDPSLALFLYSNSGENF 346
>gi|319430413|ref|NP_985957.2| AFR410Wp [Ashbya gossypii ATCC 10895]
gi|308912578|gb|AAS53781.2| AFR410Wp [Ashbya gossypii ATCC 10895]
gi|374109187|gb|AEY98093.1| FAFR410Wp [Ashbya gossypii FDAG1]
Length = 326
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 155/419 (36%), Gaps = 124/419 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLA---TAKDAVVQTHRDFIKAGADIVMT 58
NV ++DGG +L D+ PLWS+ FL A D + +R+F AG+ + T
Sbjct: 14 NVLVMDGGMGVELERRGMDV--KSPLWSTAPFLRGDRAALDTIRGLYREFRAAGSRGIST 71
Query: 59 NSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQAS ++ Y S + S DY K
Sbjct: 72 LTYQASFHSMVK-----YSGS---VSSRADYEK--------------------------- 96
Query: 119 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
++E V + T E DPARD +I GSVGPY A L +G+EY
Sbjct: 97 ----------------FLEQVVDFTYRECV-----DPARDYII-GSVGPYAAFLCNGAEY 134
Query: 179 RGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCR-----LLREWP 232
GDY + P++ + D +A ET+P E + + LL+ P
Sbjct: 135 TGDY--GFETINFFNYFEPQVSKFATDPRIDAIAFETVPNVVELMAMLQPEFHALLKNKP 192
Query: 233 HQKAWLSFSCKDDKHISNGESFT---QVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL 289
++S S KD+ + +G Q+ R + P L+ G+NCV ++++ +L
Sbjct: 193 F---YISISAKDEHVLRDGTPLAVVGQLIRERMDDLPPNLLCFGLNCVDLTRSAAMLAEL 249
Query: 290 KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
+ ++ P +A +Y
Sbjct: 250 NMQ----------------LQDCPIKFQA-----------------------------IY 264
Query: 350 PNSGERYDAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
PN +D + W E + + V +L++ ++GGCC T +D + LD
Sbjct: 265 PNGTSVFDESLSAWRPSKDAESLTWAEAVKLYLNQDCRMIGGCCGTTPQDMRQIAEALD 323
>gi|444316058|ref|XP_004178686.1| hypothetical protein TBLA_0B03260 [Tetrapisispora blattae CBS 6284]
gi|387511726|emb|CCH59167.1| hypothetical protein TBLA_0B03260 [Tetrapisispora blattae CBS 6284]
Length = 326
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 67/262 (25%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGAD-ILAIETIPASK 219
+ GS+GPY + + +EY GDY H + +P++ + ++A+ET+P
Sbjct: 122 LIGSIGPYASHV--SAEYTGDYGLHPENVDYLNYFKPQLDNFNDNDDIDLIAMETVPNKY 179
Query: 220 EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN---MNPDQLIAVGVNC 276
E + L + ++S S DD ++ +G S ++ N NP+ L+ VGVNC
Sbjct: 180 ELKALLSWDGTTIKKPFYISLSVGDDGNLRDGTSMDTISTMFQNREVKNPN-LMMVGVNC 238
Query: 277 V---RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333
V + LM+ + Q+ ++PLV YPNSGE
Sbjct: 239 VSYDKTLMIIKKL-QIAVPDLPLVCYPNSGE----------------------------- 268
Query: 334 WLSFSCKTENIPLVVYPNSGERYDAVNARW-IDRDL-CEPVDKYVTDWLDEGVALVGGCC 391
YD + W + D+ + + V D + GV +VGGCC
Sbjct: 269 ---------------------VYDQITQSWKTNNDIKLDSWETLVKDLVANGVRMVGGCC 307
Query: 392 RTYAEDTLHMKHRLDDWVSGLS 413
RT +D H++ VS LS
Sbjct: 308 RTTPDDI----HKIAQAVSHLS 325
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 510 DDKHISNGESFTQVARTCYN---MNPDQLIAVGVNCV---RPLMVSPLIEQLKTENIPLV 563
DD ++ +G S ++ N NP+ L+ VGVNCV + LM+ + Q+ ++PLV
Sbjct: 204 DDGNLRDGTSMDTISTMFQNREVKNPN-LMMVGVNCVSYDKTLMIIKKL-QIAVPDLPLV 261
Query: 564 VYPNSGERYD 573
YPNSGE YD
Sbjct: 262 CYPNSGEVYD 271
>gi|385305570|gb|EIF49534.1| homocysteine s-methyltransferase [Dekkera bruxellensis AWRI1499]
Length = 254
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 69/296 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DG ++L + + D LWS + + + + D++ G++++ T +YQ +
Sbjct: 12 LLDGATGTELEKHGVSLND--KLWSGIAVISEPXKLEEVXLDYLNCGSELIETATYQLTK 69
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
G ++ DLD S+YQ +AI + + + + + +I GS+GP+GA L
Sbjct: 70 KGLIKH-DLDPHSTYQ----------KAIDIADSARQKHFEKTGKKAMIVGSIGPFGAYL 118
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
DG+E+ G Y E +E M +H +D R DY+
Sbjct: 119 ADGAEFTGHYPEIXNE-EMKAFH---SD-------------------------RLDYL-- 147
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE---------WPHQKA 236
++ P + D++ ETIP+ +E + + +++ P++
Sbjct: 148 --------YNSPLV--------DLIGFETIPSFEEVKSILEMMKTKLDEAKKAGKPYKPY 191
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292
+L+ SC + +++G +V + L+AVG NC LIE+ E
Sbjct: 192 YLALSCSPEMVLADGSLLHKVLEYINGHLEENLVAVGANCCGLRTSKVLIEKFDLE 247
>gi|154308390|ref|XP_001553531.1| hypothetical protein BC1G_08255 [Botryotinia fuckeliana B05.10]
Length = 369
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 161/453 (35%), Gaps = 143/453 (31%)
Query: 3 NVKLIDGGFSSQLS-TYVGDIIDGHPLWSSYFLAT----AKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L ++ + PLWSS L ++ T + F+ AGADI++
Sbjct: 6 KIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAGADILL 65
Query: 58 TNSYQASIGGF--------------MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARI 103
T +YQ S GF D D + +++S+VD +A +
Sbjct: 66 TATYQTSYEGFGGSGYAVHSHSSSNSGKADGDKEEVNGIMRSAVDIASDAFS-------T 118
Query: 104 RSDDPARDILIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIA 162
+ D + IA S+G YGA + G EY G Y +H S ++ WH +RD
Sbjct: 119 KKDSNGK---IALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKC- 174
Query: 163 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ 222
W R D +A ETIP +E +
Sbjct: 175 -------------------------------WER----------VDYVAFETIPLLEEIE 193
Query: 223 MLCRLLREWPHQKA--------WLSFSCKDDKH-ISNGESFTQVARTCYNMNPDQLI--A 271
+ + + E + W++ + + + G S Q+ + +
Sbjct: 194 GVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQQIMQAMLGNKGGSPVPFG 253
Query: 272 VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ 331
+G+NC + V SLI + + E L+ + + EWP+
Sbjct: 254 IGLNCTKVGKVESLILEFEQEVKALIEKGD-----------------------VSEWPS- 289
Query: 332 KAWLSFSCKTENIPLVVYPNS---GERYDAVNARWIDRDLCEPVDKYVTDWLDEGV---- 384
LVVYP+ GE Y+ W ++ EP K W DE V
Sbjct: 290 --------------LVVYPDGTIKGEVYNTSTKVW---EIREPPGKEDLQW-DEAVLEIV 331
Query: 385 -----------ALVGGCCRTYAEDTLHMKHRLD 406
+VGGCC+T + ++ R+D
Sbjct: 332 RRARDRGLWEDIIVGGCCKTTPREIGKLRERID 364
>gi|347826545|emb|CCD42242.1| hypothetical protein [Botryotinia fuckeliana]
Length = 369
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 161/453 (35%), Gaps = 143/453 (31%)
Query: 3 NVKLIDGGFSSQLS-TYVGDIIDGHPLWSSYFLAT----AKDAVVQTHRDFIKAGADIVM 57
+ L+DGG + L ++ + PLWSS L ++ T + F+ AGADI++
Sbjct: 6 KIHLLDGGLGTTLGDSHQVQFTEKEPLWSSQLLIPTHPHGPKTLLATQKSFVDAGADILL 65
Query: 58 TNSYQASIGGF--------------MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARI 103
T +YQ S GF D D + +++S+VD +A +
Sbjct: 66 TATYQTSYEGFGGSGYAVHSHSSSNSGKADGDKEEVNGIMRSAVDIASDAFS-------T 118
Query: 104 RSDDPARDILIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIA 162
+ D + IA S+G YGA + G EY G Y +H S ++ WH +RD
Sbjct: 119 KKDSNGK---IALSLGAYGAIMTPGQEYTGKYDDDHKSSEQLSSWHHERISVFSRDPKC- 174
Query: 163 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ 222
W R D +A ETIP +E +
Sbjct: 175 -------------------------------WER----------VDYVAFETIPLLEEIE 193
Query: 223 MLCRLLREWPHQKA--------WLSFSCKDDKH-ISNGESFTQVARTCYNMNPDQLI--A 271
+ + + E + W++ + + + G S Q+ + +
Sbjct: 194 GVRKSMGEVENSNGGTAGSKPFWITCVFPGEGNCLPGGSSVQQIMQAMLGNKGGSPVPFG 253
Query: 272 VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ 331
+G+NC + V SLI + + E L+ + + EWP+
Sbjct: 254 IGLNCTKVGKVESLILEFEQEVKALIEKGD-----------------------VSEWPS- 289
Query: 332 KAWLSFSCKTENIPLVVYPNS---GERYDAVNARWIDRDLCEPVDKYVTDWLDEGV---- 384
LVVYP+ GE Y+ W ++ EP K W DE V
Sbjct: 290 --------------LVVYPDGTIKGEVYNTSTKVW---EIREPPGKEDLQW-DEAVLEIV 331
Query: 385 -----------ALVGGCCRTYAEDTLHMKHRLD 406
+VGGCC+T + ++ R+D
Sbjct: 332 RRARDRGLWKDIIVGGCCKTTPREIGKLRERID 364
>gi|367004469|ref|XP_003686967.1| hypothetical protein TPHA_0I00260 [Tetrapisispora phaffii CBS 4417]
gi|357525270|emb|CCE64533.1| hypothetical protein TPHA_0I00260 [Tetrapisispora phaffii CBS 4417]
Length = 323
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 151/419 (36%), Gaps = 129/419 (30%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLA-----------TAKDAVVQTHRDFIKAG 52
+ ++DGG ++L +I PLWS+ T + + + DF AG
Sbjct: 16 ILVLDGGQGTELENRGVNI--NSPLWSTISFVNDKFWDENIENTERKCIREMFNDFKDAG 73
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
A++ T +YQ S E D+ +L+ H +R
Sbjct: 74 ANVFSTLTYQTSFSSVSENTDIK-------------------SLQEYHELLRK------- 107
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
I G R I+DD D L+ G +G Y AS+
Sbjct: 108 -ITGFC-----------------------------RRCISDD---DYLL-GCIGAYAASI 133
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREW 231
G+EY G+Y + ++ +P++ + DI+ ETIP E + + +
Sbjct: 134 --GAEYDGNYGLFAGKIDYLKYFKPQLDEFNNDMNIDIIGFETIPNKHELEAILSWDEDI 191
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTC--YNMNPDQLIAVGVNCVRPLMVSSLIEQL 289
++ +++ S D + +G SF ++ R Y L+ VG NC+ I +L
Sbjct: 192 INRPFFIALSLSDKNGLRDGTSFEEMGRLFAKYKGRNKNLVYVGGNCISYAYSIDNIRKL 251
Query: 290 K--TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLV 347
++ L+ YPNSGE I K Q W S S
Sbjct: 252 HDIVPHLNLIAYPNSGE-------IYDQKSKQ--------------WSSTS--------- 281
Query: 348 VYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
A+ W ++ V ++ D GV ++GGCCRT +D +K +D
Sbjct: 282 ----------AIKISW---------EEVVNEYADAGVKIIGGCCRTTPDDIKQIKKAVD 321
>gi|336372079|gb|EGO00419.1| hypothetical protein SERLA73DRAFT_181000 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384829|gb|EGO25977.1| hypothetical protein SERLADRAFT_466856 [Serpula lacrymans var.
lacrymans S7.9]
Length = 398
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 165/426 (38%), Gaps = 94/426 (22%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG + L + I PLWS+ + + ++Q H F+ AGA ++T++YQ
Sbjct: 11 SVNVLDGGLGTTLEDIFHEDIAHTPLWSAKSIDENSETLIQVHLSFLGAGARTILTSTYQ 70
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDIL-----IAGS 117
+ F E + + ++++ SV+ +E A+ R D R++L IA S
Sbjct: 71 CAFTTF-ERAGYSREDATRIMRKSVEVARE--------AKRRFCDQNRNVLPGDIRIALS 121
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYG----ASLR 173
+GP+GA+L E+ G Y PYG +S
Sbjct: 122 LGPFGATLYPAQEFDGFYPP-----------------------------PYGPKAFSSSG 152
Query: 174 DGSEYRGDYVEHVSEA--TMAEWHRPRIQALVE-----AGADILAIETIPASKEAQMLCR 226
GD V + +A +H R+Q D +A ET+P ++E + + R
Sbjct: 153 QNENVFGDDVAQRESSIDALAHFHSERLQVFTSDRECWDAVDCIAFETVPLAREVKAIRR 212
Query: 227 LLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMN--PDQLIAVGVNCVRPLMVSS 284
+ L + D NGE T + P++ G ++++
Sbjct: 213 AM-------GMLGGAVAD-----NGEWKPWWISTVFPGGHYPERKTPGGEYLSASEVLNA 260
Query: 285 LIEQLKTENI------PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS 338
++ + I PL + G + IE +P +L R N +
Sbjct: 261 VLGEENDGRIGEVVRQPLTLPSGIGINCTGIEFLP-----DLLSDFERALNNAEEKARLG 315
Query: 339 CKTENIPLVVYPNSGERYDAVNARWIDRD-----------LCEPVDKYVTDWLDEGVALV 387
+ LV+YPN G+ YD V+ W + L + VD + G+ LV
Sbjct: 316 GRPW---LVLYPNGGDVYDPVSRTWRGSNETQKGRVWGEQLGQIVDSARGNGTWGGI-LV 371
Query: 388 GGCCRT 393
GGCCRT
Sbjct: 372 GGCCRT 377
>gi|367003831|ref|XP_003686649.1| hypothetical protein TPHA_0G03760 [Tetrapisispora phaffii CBS 4417]
gi|357524950|emb|CCE64215.1| hypothetical protein TPHA_0G03760 [Tetrapisispora phaffii CBS 4417]
Length = 331
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 158/427 (37%), Gaps = 135/427 (31%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
V ++DGG ++L I +P+WS+ F++ + + V + DFI AGA
Sbjct: 17 VLVMDGGQGTELENR--GIKVANPVWSTIPFISESFWSDQSSEDRKIVKEMFNDFINAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+I+MT +YQ S E + Y +L+ +D+ ++ I E
Sbjct: 75 EILMTTTYQTSFKSVSENTPIKNTKHYNELLNRIIDFSRDCIGEER-------------- 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ G +G +GA + +E+ GDY EH E+ + P D +
Sbjct: 121 YLIGCIGSWGAHI--CAEFHGDYGEHPENIDFYEYFK-----PQLDNFFNNN-------- 165
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP 232
D++ ET+P E + + +
Sbjct: 166 ---------------------------------KLDLIGFETVPNIHELKAILSWDEKIL 192
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCY----NMNPDQLIAVGVNCVRPLMVSSLIEQ 288
+ ++ S ++ + +G S +VA +NP+ L +G+NCV + +I+
Sbjct: 193 SKPFYIGLSVHENGLLRDGTSMQEVANLIKGFGEKLNPN-LTLLGINCVSYNHSNDIIKS 251
Query: 289 LKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
+ E N+PL+ YPNSGE +T +K WL
Sbjct: 252 IHKELPNLPLIAYPNSGE---IYDT------------------TKKIWL----------- 279
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED----TLHMK 402
PN + W D V +++ GV ++GGCCRT D T+ +K
Sbjct: 280 ---PNKNPIF-----TW---------DDIVKGYIEAGVRIIGGCCRTTPNDIKAVTIAVK 322
Query: 403 HRLDDWV 409
R ++
Sbjct: 323 ERAKKYI 329
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 514 ISNGESFTQVARTCY----NMNPDQLIAVGVNCVRPLMVSPLIEQLKTE--NIPLVVYPN 567
+ +G S +VA +NP+ L +G+NCV + +I+ + E N+PL+ YPN
Sbjct: 208 LRDGTSMQEVANLIKGFGEKLNPN-LTLLGINCVSYNHSNDIIKSIHKELPNLPLIAYPN 266
Query: 568 SGERYD 573
SGE YD
Sbjct: 267 SGEIYD 272
>gi|303319811|ref|XP_003069905.1| Homocysteine S-methyltransferase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109591|gb|EER27760.1| Homocysteine S-methyltransferase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 363
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 163/413 (39%), Gaps = 97/413 (23%)
Query: 27 PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYD--------- 77
PLWSS+ L + + + HR ++ AGADIV+T +YQAS GF + +
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQDE 78
Query: 78 ----SSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRD-GSEYR 132
++Y+ + ++ Y++ AI L + S P +A S+GPYGA++ +EY
Sbjct: 79 RHGHATYRPMDAT-RYMRSAIPLAYSSFNFSSKPPR----VALSLGPYGATMCPVSAEYT 133
Query: 133 GDYVEHVSE-ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATM 191
G Y E +S A + WH A+ + + + D +R +E + T+
Sbjct: 134 GIYPEEMSNTAALEAWH-------AKRLEVY---------MEDPETWRK--IEFLGFETV 175
Query: 192 AEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS-FSCKDDKHISN 250
W + A+ A +L I S+ K W+S ++D +
Sbjct: 176 RRWD--EVLAIRGAMGKLLQIAESGQSR---------------KWWISGVFPQEDIDEED 218
Query: 251 GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIE 310
+T A + N +GVNC R + +++ ++ E L E
Sbjct: 219 VRRWTSAAFGSTSENGLHPWGIGVNCTRLENIERIVDIMEDE--------------LGRE 264
Query: 311 TIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS--GERYDAVNARWIDRD- 367
+ + E + W + + W LV+YP+ GE YD W+ +D
Sbjct: 265 KLTDNGERASVG---SSW-SSRPW-----------LVLYPDGTQGEIYDPTLKTWVKKDE 309
Query: 368 ---------LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSG 411
C + + + LVGGCCRT D ++ R+D SG
Sbjct: 310 EEITESWPERCWRIVNHTWNRNAWNGILVGGCCRTRVHDIRALRERIDSAWSG 362
>gi|302915064|ref|XP_003051343.1| hypothetical protein NECHADRAFT_40637 [Nectria haematococca mpVI
77-13-4]
gi|256732281|gb|EEU45630.1| hypothetical protein NECHADRAFT_40637 [Nectria haematococca mpVI
77-13-4]
Length = 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 161/431 (37%), Gaps = 128/431 (29%)
Query: 6 LIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQAS 64
++DGG + L S Y PLWSS+ L + + DF D+++T +YQ S
Sbjct: 7 ILDGGLGTSLESKYSVSFSRSTPLWSSHLLISDPATLESCQSDFGAVPVDVLLTATYQVS 66
Query: 65 IGGFM-----EFLD-LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSV 118
GF EF D + D+ + + +V+ + A+ +A +A S
Sbjct: 67 AKGFADTRTEEFPDGIGRDTVPRFLDDAVNIAQRAVGDKAQ--------------VALSY 112
Query: 119 GPYGASLRDGSEYRGDYVE-HVSEATMAEWHR----LITDDPARDILIAGSVGPYGASLR 173
GPYGA L EY G Y + H SE+T+ EWHR L + P D+
Sbjct: 113 GPYGACLIPSQEYSGKYDDAHDSESTLEEWHRERLGLFAEVP--DV-------------- 156
Query: 174 DGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPH 233
G V HV+ T+ PR+ ++ A ++A L + P+
Sbjct: 157 ------GKRVSHVALETI-----PRVDEII-------------AMRKALAATPALSDLPY 192
Query: 234 QKAWLS-FSCKDDKHISNGESFTQVARTCYN--MNPDQLIAVGVNCVRPLMVSSLIEQLK 290
W S S D + +G S + ++ +G+NC + + L++ +
Sbjct: 193 ---WTSCLSPGSDLTLPDGNSIEAAVEAMLDSSVSVKTPWGIGINCTKVDKLDRLLQIFE 249
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
+ L+ G L +WP LV+YP
Sbjct: 250 STVARLI---EQGR--------------------LDDWPA---------------LVLYP 271
Query: 351 N--SGERYDAVNARWIDRDLCEPVDKYVTDWLDE--------------GVALVGGCCRTY 394
+ +GE Y+ +W L + D+ + W + V LVGGCC+
Sbjct: 272 DGTNGEVYNTTTQKW--ELLDDAKDQVRSSWESQVESVVRATESRGKWPVILVGGCCKAR 329
Query: 395 AEDTLHMKHRL 405
+ED ++ RL
Sbjct: 330 SEDIKRLRDRL 340
>gi|380494649|emb|CCF32990.1| homocysteine S-methyltransferase [Colletotrichum higginsianum]
Length = 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 170/447 (38%), Gaps = 138/447 (30%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
V ++DGG + L + PLWS++ L +D ++ +DF DI++T +
Sbjct: 12 RVLILDGGLGTSLEDKYNIKFESATTPLWSTHLLVDGQDTLLACQKDFGDVPVDIILTAT 71
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSVG 119
YQ SI GF Y + ++++ +++++AI + R ++ A SVG
Sbjct: 72 YQLSIHGFASTRTAKYPQG--IDRATIGNFIQDAIRIAHEAGRTQASKTAL------SVG 123
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
PYGA + G EY G Y EH S + EWH
Sbjct: 124 PYGACMIPGQEYSGAYDAEHDSLDKLREWH------------------------------ 153
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCRLLRE--- 230
R+Q +AGA +A+ETIP + E + + + L E
Sbjct: 154 -----------------LERLQLFKDAGAFASPVSYVAVETIPRADEIKAVRQALDESGV 196
Query: 231 WPHQKA---WL-SFSCKDDKHISNGESFTQVARTCYNMNPDQLIA----VGVNCVRPLMV 282
Q + W+ S ++D+ + +G S + ++PD + +G+NC + +
Sbjct: 197 LATQASIPFWIASLFPREDECLPDGSSIKEAVXAM--LSPDVATSRPWGIGINCTKVWKL 254
Query: 283 SSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
SL++ ++ L+ + G AI PA
Sbjct: 255 ESLVKGYESAVQGLI---DDG----AIAEAPA---------------------------- 279
Query: 343 NIPLVVYPN--SGERYDAVNARWIDRDLCEPVDKYVTDW---LDEGVA-----------L 386
L++YP+ +GE Y+ +W +L E T W L + VA +
Sbjct: 280 ---LILYPDGTNGEVYNTTTQKW---ELPEGSSHPATSWETQLSQVVANAQSRGLWKQIV 333
Query: 387 VGGCCRTYAEDTLHMKHRLDDWVSGLS 413
VGGCC+ D RL V GLS
Sbjct: 334 VGGCCKASHSDI----SRLRTAVKGLS 356
>gi|403419403|emb|CCM06103.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 161/425 (37%), Gaps = 71/425 (16%)
Query: 4 VKLIDGGFSSQLS-TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG + L T+ DI PLWS+ + + V+ H F+ AGA +++T +YQ
Sbjct: 22 VMVLDGGLGTTLEDTFQRDI--STPLWSAKPIEDDPEVVIAAHLAFLHAGAQVILTATYQ 79
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSVG 119
+ G F + + ++++ +V EA E + R + +DI IA S+G
Sbjct: 80 CAFGTFKR-AGYTQEDAVRIMRRAVQLAAEARRRFISEQNGSDQREN--LKDIKIALSLG 136
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
P+G +L E+ G Y +AG G + D E R
Sbjct: 137 PFGGTLSPTQEFDGCYPPPYGPKE----------------FVAG--GANQNAFDDSEEGR 178
Query: 180 GDYVEHVSEATMAEWHRPRIQALVE-----AGADILAIETIPASKEAQMLCRLLREWPHQ 234
E V+ + +H R++ E D LA ET+P +EA + + +
Sbjct: 179 AK--EQVAVDALNSFHLERLRMFSEDPETWTAIDYLAFETVPLKREAVAIRKAM------ 230
Query: 235 KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI 294
NGE + R N P + V P E+++ I
Sbjct: 231 ------------QALNGE----LGRDGKNTKPWWITTVWPEGKLPEERRHGGEKVQIGEI 274
Query: 295 PLVVYPNSGEHILAIETIPAS-----KEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
++GE +P + Q L +LL E + + I LV Y
Sbjct: 275 VEATVQSTGEQQGVYLGVPWGIGINCTDPQFLDQLLTELTDAVEKIHGRDNGCAIWLVAY 334
Query: 350 PNSGERYDAVNARWIDR---------DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 400
PN G YD W L + + + + +G+ LVGGCC+T E+ +
Sbjct: 335 PNRGVVYDIGTRTWTQTREDGNEWAIRLADVTARQMQRGIWKGL-LVGGCCKTGPEEIVK 393
Query: 401 MKHRL 405
+ ++
Sbjct: 394 LAEKM 398
>gi|407843935|gb|EKG01706.1| cytidine triphosphate synthase, putative [Trypanosoma cruzi]
Length = 410
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 139/359 (38%), Gaps = 96/359 (26%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DG + L ++ D +WSS L + D V + HR +I AG D+++T +
Sbjct: 6 VTGVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCT 65
Query: 61 YQASIGGF----MEFLDLDYDSSYQLIKSSVDYVKEAIALEATHAR-------------- 102
YQ G M +L D + Q + ++ K+ E + A+
Sbjct: 66 YQMHEEGCAASKMTMCEL-VDRAVQAARHTMPKQKQKGLTEESTAKERRTGGIDVFRYAL 124
Query: 103 --IRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDIL 160
I+ + R +L+AGS+GPYG+SL G EY G+Y H EA + +H AR +
Sbjct: 125 SSIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEYSIH--EAVINAFH-------ARRL- 174
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
A L + E G V D L +ET P E
Sbjct: 175 --------EAFLCNVGEKHGLKV------------------------DFLLLETFPLLDE 202
Query: 221 AQMLC------RLLREWPHQKAWLSFSCK-------DDKHISN-------------GESF 254
A + +LR P ++++ K DD + N G +F
Sbjct: 203 ALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENADDDALDNWWNAAASSIRLPDGNTF 262
Query: 255 TQVARTCYNMNPDQLIAVGVNCVRPLMVS----SLIEQLKTEN---IPLVVYPNSGEHI 306
L+ +G NC PL VS +L+ + + + + L++YPNSGE
Sbjct: 263 EGALSELRGNCGTALVGMGCNCSGPLEVSLVATALLHKKRQDTEGPLVLLLYPNSGEKF 321
>gi|402224461|gb|EJU04524.1| Homocysteine S-methyltransferase [Dacryopinax sp. DJM-731 SS1]
Length = 388
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 80/340 (23%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG + + + + + HPLWS L + +V TH F++AGAD++ T +YQ+ +
Sbjct: 10 ILDGGLGTTIEE-LDEQVTHHPLWSGKLLHDNPELLVDTHLRFLEAGADVIETATYQSCL 68
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F+ + + + I S++ +EAI +S R L+A S+GPYGA +
Sbjct: 69 PTFVR-AGYEQEEAQASILSAITLAEEAI-----RRFEQSSGTHRRPLVALSLGPYGAQI 122
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG------SEYR 179
EY G Y PYG S+ + +
Sbjct: 123 TQ--EYGGIYPP-----------------------------PYGPSIGANILPAPETSFA 151
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCRLLRE---- 230
E ++E + +WH R+ + + +A ETIP +E + + R +
Sbjct: 152 SPEEEVLAELALTQWHFDRLLLFATSPSHWNSISYIAFETIPLLREGRAIRRAMTRLRPM 211
Query: 231 -------WPHQKAWLSFSCKDDKHI---SNGESF--TQVARTCYNMNPDQ---LI--AVG 273
WP K W+SF + K ++GE +A ++ ++ LI +G
Sbjct: 212 AEARGLIWP--KWWISFVFPEGKFPEVKTSGEPILPQDIANAMFDAEDERRNILIPDGIG 269
Query: 274 VNC-----VRPLMVS---SLIEQLKTENIPLVVYPNSGEH 305
NC ++P+++ L K LV+YP+ G H
Sbjct: 270 ANCTKLQFLKPIIIGYGEGLHRSSKGRPPELVLYPDGGYH 309
>gi|336463783|gb|EGO52023.1| hypothetical protein NEUTE1DRAFT_89911 [Neurospora tetrasperma FGSC
2508]
Length = 361
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 175/429 (40%), Gaps = 107/429 (24%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAK-DAVVQTHRDFIKAGADIVMTNS 60
V+++DGG + L + DI PLWSS+ L + + D + H F +AGA+I+ T +
Sbjct: 7 VQILDGGMGTTLED-MHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANIISTAT 65
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA-RDILIAGSVG 119
YQ SI GF + + + +D KE I + A + + + A + +A S+G
Sbjct: 66 YQISINGFAA-TKAPKSGTLDVEREGID--KEEIPRFLSRAVVLAANAAGTEGKVALSLG 122
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
PYGA++ +EY G Y EH + +WH+ + + V P
Sbjct: 123 PYGATMIPSTEYSGRYDPEHQDVQALEKWHK-------ERLNLFKDVDP----------- 164
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
++V +++ T+ PR+ +V A ++L+++ IP S LR P W+
Sbjct: 165 --NHVNYIAFETV-----PRLDEIV-AIRNLLSVDNIPTS---------LRGRP---VWI 204
Query: 239 SFS-CKDDKHISNGESFTQVART--CYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP 295
S DD + +G + + + + + +G+NC + + SL+++ +
Sbjct: 205 STPYPNDDGKLPDGSTVEEAVKAVLTHREGLETPWGIGINCTKVEKLDSLVKRYED---- 260
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS--G 353
AI+T + E WP+ LV+YP+ G
Sbjct: 261 ------------AIQTCIKNGERMA-------WPS---------------LVLYPDGTKG 286
Query: 354 ERYDAVNARWIDRDLCEPVDKYVTDW--LDEGVA------------LVGGCCRTYAEDTL 399
E Y+ W +L + T W + GV +VGGCC+ E
Sbjct: 287 EVYNTATKTW---ELSPGHKQTETPWETVLAGVVEAARQRGNWKSIVVGGCCKASPEHIR 343
Query: 400 HMKHRLDDW 408
++ L D+
Sbjct: 344 RLRRTLQDY 352
>gi|443923441|gb|ELU42685.1| 40S ribosomal protein S0 [Rhizoctonia solani AG-1 IA]
Length = 607
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 165/442 (37%), Gaps = 124/442 (28%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ +D G + L + I HPLWS++ + T DA+V+ H F++AG+ +++T
Sbjct: 19 DIAFLDAGLGTTLEDVLHKNIS-HPLWSAHLIDTNPDAIVEAHLAFLRAGSSVILT---- 73
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDIL---IAGSVG 119
+ G+ +D + + +AIAL I + + D L +A S+G
Sbjct: 74 -ATAGYT------HDQASAI-------THKAIALAVRAREIYMNITSPDTLKPQVALSLG 119
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
P+GA+L +E+ G I P + G +
Sbjct: 120 PFGATLSPAAEFSG-------------------------IYPPPYGPPQPVTFFTGEQAL 154
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEA-----GADILAIETIPASKEAQMLCRLLREWPHQ 234
D E +E + ++H RI L DI+A ET+P +EA+ + R + +
Sbjct: 155 ED--EQKAENALLKFHLERISMLASTKETWDAIDIIAFETVPLLREARAIRRAMTAFASA 212
Query: 235 KA-------WLSFSCKDD---KHISNGESFTQ--VARTCYNMN-------PDQLIAVGVN 275
W+SF+ D + S G+++T C+ + PD A G+N
Sbjct: 213 NPSLRIPPWWISFNFPDGVLPEQTSQGKNYTAGDAVSACFAQHQADSTAIPD---AFGIN 269
Query: 276 C--VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333
C VR L + + + Y S +L +P+ + P
Sbjct: 270 CTQVRYLHECVSLASDALQTVKQNPYSKSRPSVLDPRNLPS-----------KSGPT--- 315
Query: 334 WLSFSCKTENIPLVVYPNSGERYDAVNARWI--------DRDLCEPVDKYVTDWLD--EG 383
LVVYPN G YD W+ + L E D + +D +G
Sbjct: 316 ------------LVVYPNGGRIYDPNTMTWLPAASESSETKGLSE-SDAWAIGLVDVLQG 362
Query: 384 VA---------LVGGCCRTYAE 396
L+GGCC+T E
Sbjct: 363 AVPEDSGWSGLLIGGCCKTEPE 384
>gi|219127265|ref|XP_002183859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404582|gb|EEC44528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 418
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 51/283 (18%)
Query: 41 VVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATH 100
V Q H D+++AGA+++ T +YQ Y ++Y + K +A
Sbjct: 88 VRQGHDDWLRAGANVLSTVTYQC-----------HYQAAY--------WPKGKMATNDKD 128
Query: 101 ARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDIL 160
+R+ DD + L + + + DY + L T R
Sbjct: 129 SRVM-DDAVVNTL-------WNDGVEIAQQAVKDYCHNQQRPHTLRQPELETSSVPR--Y 178
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+ S G YGA L +G+EY G+Y V+ + +HR +++ V+ D +AIET+P+ E
Sbjct: 179 VVASSGCYGAILANGAEYTGNYGP-VTVDDLVHFHRRKVRRAVQLHPDGIAIETVPSLLE 237
Query: 221 AQMLCRLLREWPHQKA----------WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI 270
L +L + P A W+S SC++++ +++G + +
Sbjct: 238 CHALVQLFQ--PTNGAAPMLLNKTACWISLSCRNERELNDGTPLVAALNVLSQIPCTAVS 295
Query: 271 AVGVNCVR----PLMVSSLIEQLKTE-----NIPLVVYPNSGE 304
A G+NC P +V L + + E LV+YPNSGE
Sbjct: 296 AWGLNCCSVTHLPALVRILTQHVAQEASGKHRRGLVLYPNSGE 338
>gi|365764241|gb|EHN05765.1| Mht1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 166/424 (39%), Gaps = 132/424 (31%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWS-------SYFLATAKD--AVVQTHRDFIKAG 52
V ++DGG ++L +I P+WS S++ ++++ V + +RDF+ AG
Sbjct: 15 GKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSRERKVVEEMYRDFMIAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARD 111
A+I+MT +YQA+ E + ++Y+ + V + +E I E
Sbjct: 73 ANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEER------------- 119
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GP+ A + EY GDY GP+ +
Sbjct: 120 -YLIGSIGPWAAHV--SCEYTGDY------------------------------GPHPEN 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLRE 230
+ +Y G + +P+++ + D++ ETIP E + + +
Sbjct: 147 I----DYYG-------------FFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDED 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S D+ + +G + +++ + N L+ +GVNCV S+LI
Sbjct: 190 IISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALIL 248
Query: 288 QLKTENI---PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++ E++ PL+VYPNSGE P +K W + K ++
Sbjct: 249 KMLHEHLPGMPLLVYPNSGEIYN---------------------PKEKTWHRPTNKLDD- 286
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + V ++D G ++GGCCRT +D +
Sbjct: 287 ------------------W---------ETXVKKFVDNGARIIGGCCRTSPKDIAEIASA 319
Query: 405 LDDW 408
+D +
Sbjct: 320 VDKY 323
>gi|71650841|ref|XP_814110.1| homocysteine S-methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70879055|gb|EAN92259.1| homocysteine S-methyltransferase, putative [Trypanosoma cruzi]
Length = 410
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 168/460 (36%), Gaps = 134/460 (29%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
V + DG + L ++ D +WSS L + D V + HR +I AG D+++T +
Sbjct: 6 FTGVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCT 65
Query: 61 YQ-------ASIGGFMEFLDLDYDSSYQLI--KSSVDYVKEAIALEA----------THA 101
YQ AS E +D ++ + + +E+ A E +
Sbjct: 66 YQMHEEGCAASKVTMCELVDRAVQAARHTMPQRKQKGLTEESTAKERRTGGIDVFRYALS 125
Query: 102 RIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILI 161
I+ + R +L+AGS+GPYG+SL G EY G+Y H EA + +H AR +
Sbjct: 126 SIKDNGQERVVLLAGSLGPYGSSLPGGQEYLGEYSIH--EAVINAFH-------ARRL-- 174
Query: 162 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEA 221
+ E H ++ D L +ET P EA
Sbjct: 175 -----------------------EAFLCNVGEKHAFKV--------DFLLLETFPRLDEA 203
Query: 222 QMLC------RLLREWPHQKAWLSFSCK-------DDKHISN-------------GESFT 255
+ +LR P ++++ K DD + N G +F
Sbjct: 204 LGILSFVNQHEILRTAPFCFSFIAVPVKNPLPENADDDALDNWWNAAASSIRLPDGNTFE 263
Query: 256 QVARTCYNMNPDQLIAVGVNCVRPLMVS----SLIEQLKTEN---IPLVVYPNSGEHIL- 307
L+ +G NC PL VS +L+ + + + + L++YPNSGE
Sbjct: 264 GALSELRGNCGTALVGMGCNCSGPLEVSLVATALLHKKRQDTEGPLVLLLYPNSGEKFTD 323
Query: 308 -----AIETIPASKEAQMLCR-----LLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
++ I S ++ R L R N ++ F + +R +
Sbjct: 324 GQWKKPLQQIQTSAAERLSMRDLKRILARGGGNLITFMKFLLQLLQ----------QRPE 373
Query: 358 AVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
A TDWL E + + G CCR+ ED
Sbjct: 374 A------------------TDWLFE-IIVCGACCRSTPED 394
>gi|403214620|emb|CCK69121.1| hypothetical protein KNAG_0B06970 [Kazachstania naganishii CBS
8797]
Length = 332
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 49/242 (20%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEA-GADILAIETIP 216
D + G +GP+GA + +E+ GDY + +E + +P++ D++ ETIP
Sbjct: 119 DKYLIGCIGPWGAHV--CAEFNGDYGPNPAEIDYLSYFKPQLDNFFHNDNLDLIGFETIP 176
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
E + + + ++ S ++ + +G + VA
Sbjct: 177 NIHELRAILSWDETILSKPFYIGLSVHNNGLLRDGSTMKDVAD----------------- 219
Query: 277 VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLS 336
++ S +L N +L I + S +L + +E P+
Sbjct: 220 ----LIKSFGGKL-----------NKNLTLLGINCVSFSDSPDILESIHKELPD------ 258
Query: 337 FSCKTENIPLVVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYA 395
+PL+ YPNSGE YD V W+ +RD+ ++ V ++ G +VGGCCRT
Sbjct: 259 -------MPLIAYPNSGEVYDTVKKIWLPNRDMVMTWEEVVDRYIKAGARIVGGCCRTSP 311
Query: 396 ED 397
+D
Sbjct: 312 KD 313
>gi|119183406|ref|XP_001242744.1| hypothetical protein CIMG_06640 [Coccidioides immitis RS]
Length = 1785
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 1 MANVKLIDGGFSSQLS--TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMT 58
+ N+ L+DG + L Y PLWSS+ L + + + HR ++ AGADIV+T
Sbjct: 5 IPNILLLDGAMGTVLEEPPYGFTFSAQTPLWSSHLLLSHPTTLSEIHRSYVDAGADIVLT 64
Query: 59 NSYQASIGGFMEFL-------------DLDYDSSYQLIKSSVDYVKEAIALEATHARIRS 105
+YQAS GF + D ++Y+ + ++ Y++ AI L + S
Sbjct: 65 ATYQASFEGFARTAIVPANVPADHKQDERDGHATYRPMDAT-RYMRSAIPLAYSSFNFSS 123
Query: 106 DDPARDILIAGSVGPYGASLRD-GSEYRGDYVEHVSE-ATMAEWH 148
P +A S+GPYGA++ +EY G Y E +S A + WH
Sbjct: 124 KPPR----VALSLGPYGATMCPVSAEYTGIYPEEMSNTAALEAWH 164
>gi|349579670|dbj|GAA24831.1| K7_Mht1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 324
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 132/424 (31%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATA---------KDAVVQTHRDFIKAG 52
V ++DGG ++L +I P+WS+ + + V + +RDF+ AG
Sbjct: 15 GKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARD 111
A+I+MT +YQA+ E + ++Y+ + V + +E I E
Sbjct: 73 ANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEER------------- 119
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GP+ A + EY GDY GP+ +
Sbjct: 120 -YLIGSIGPWAAHV--SCEYTGDY------------------------------GPHPEN 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLRE 230
+ +Y G + +P+++ + D++ ETIP E + + +
Sbjct: 147 I----DYYG-------------FFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDED 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S D+ + +G + +++ + N L+ +GVNCV S+LI
Sbjct: 190 IISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALIL 248
Query: 288 QLKTENI---PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++ E++ PL+VYPNSGE P +K W + K ++
Sbjct: 249 KMLHEHLPGMPLLVYPNSGEIYN---------------------PKEKTWHRQTNKLDD- 286
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + V ++D G ++GGCCRT +D +
Sbjct: 287 ------------------W---------ETTVKKFVDNGARIIGGCCRTSPKDIAEIASA 319
Query: 405 LDDW 408
+D +
Sbjct: 320 VDKY 323
>gi|151941112|gb|EDN59490.1| S-Methylmethionine Homocysteine methylTransferase [Saccharomyces
cerevisiae YJM789]
gi|323354004|gb|EGA85856.1| Mht1p [Saccharomyces cerevisiae VL3]
Length = 324
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 132/424 (31%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATA---------KDAVVQTHRDFIKAG 52
V ++DGG ++L +I P+WS+ + + V + +RDF+ AG
Sbjct: 15 GKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARD 111
A+I+MT +YQA+ E + ++Y+ + V + +E I E
Sbjct: 73 ANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEER------------- 119
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GP+ A + EY GDY GP+ +
Sbjct: 120 -YLIGSIGPWAAHV--SCEYTGDY------------------------------GPHPEN 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLRE 230
+ +Y G + +P+++ + D++ ETIP E + + +
Sbjct: 147 I----DYYG-------------FFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDED 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S D+ + +G + +++ + N L+ +GVNCV S+LI
Sbjct: 190 IISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALIL 248
Query: 288 QLKTENI---PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++ E++ PL+VYPNSGE P +K W + K ++
Sbjct: 249 KMLHEHLPGMPLLVYPNSGEIYN---------------------PKEKTWHRPTNKLDD- 286
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + V ++D G ++GGCCRT +D +
Sbjct: 287 ------------------W---------ETTVKKFVDNGARIIGGCCRTSPKDIAEIASA 319
Query: 405 LDDW 408
+D +
Sbjct: 320 VDKY 323
>gi|6322966|ref|NP_013038.1| Mht1p [Saccharomyces cerevisiae S288c]
gi|74583856|sp|Q12525.1|MHT1_YEAST RecName: Full=Homocysteine S-methyltransferase 1; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
1; Short=SMM:Hcy S-methyltransferase 1
gi|642322|emb|CAA87995.1| ORF L0552 [Saccharomyces cerevisiae]
gi|1360274|emb|CAA97515.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270278|gb|AAS56520.1| YLL062C [Saccharomyces cerevisiae]
gi|190405993|gb|EDV09260.1| S-Methylmethionine Homocysteine methylTransferase [Saccharomyces
cerevisiae RM11-1a]
gi|207343298|gb|EDZ70799.1| YLL062Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272706|gb|EEU07680.1| Mht1p [Saccharomyces cerevisiae JAY291]
gi|259147932|emb|CAY81181.1| Mht1p [Saccharomyces cerevisiae EC1118]
gi|285813367|tpg|DAA09263.1| TPA: Mht1p [Saccharomyces cerevisiae S288c]
gi|323303914|gb|EGA57694.1| Mht1p [Saccharomyces cerevisiae FostersB]
gi|323308161|gb|EGA61411.1| Mht1p [Saccharomyces cerevisiae FostersO]
gi|323332578|gb|EGA73985.1| Mht1p [Saccharomyces cerevisiae AWRI796]
gi|323347572|gb|EGA81839.1| Mht1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 324
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 132/424 (31%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATA---------KDAVVQTHRDFIKAG 52
V ++DGG ++L +I P+WS+ + + V + +RDF+ AG
Sbjct: 15 GKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARD 111
A+I+MT +YQA+ E + ++Y+ + V + +E I E
Sbjct: 73 ANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEER------------- 119
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GP+ A + EY GDY GP+ +
Sbjct: 120 -YLIGSIGPWAAHV--SCEYTGDY------------------------------GPHPEN 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLRE 230
+ +Y G + +P+++ + D++ ETIP E + + +
Sbjct: 147 I----DYYG-------------FFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDED 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S D+ + +G + +++ + N L+ +GVNCV S+LI
Sbjct: 190 IISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALIL 248
Query: 288 QLKTENI---PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++ E++ PL+VYPNSGE P +K W + K ++
Sbjct: 249 KMLHEHLPGMPLLVYPNSGEIYN---------------------PKEKTWHRPTNKLDD- 286
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + V ++D G ++GGCCRT +D +
Sbjct: 287 ------------------W---------ETTVKKFVDNGARIIGGCCRTSPKDIAEIASA 319
Query: 405 LDDW 408
+D +
Sbjct: 320 VDKY 323
>gi|345562713|gb|EGX45749.1| hypothetical protein AOL_s00140g65 [Arthrobotrys oligospora ATCC
24927]
Length = 342
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 151/421 (35%), Gaps = 124/421 (29%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+ ++DG + L PLWSS L + H +IKAGA + T +YQ
Sbjct: 5 IIILDGALGTLLCDTTSPEASASPLWSSIDLLHNPSRLADVHAQYIKAGAGCIETATYQL 64
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
+ D D ++ +++ +A++AT + P G
Sbjct: 65 CRETLLRSGVSDEDQMRKICHAAMQ-----LAVDATK----------------DLKPTGN 103
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
+ + S +A S+GP+G L EY G Y
Sbjct: 104 NNNNAS-------------------------------VALSLGPFGMCLHPSQEYSGAYP 132
Query: 184 EHVSEAT------MAEWHRPRIQALVEAG------ADILAIETIPASKEAQMLC--RLL- 228
+ + + +WHR R+QA +A DILA ET+P + +++ R++
Sbjct: 133 PPYNTDSADAVDALEKWHRDRLQAFQKASNDAFEEIDILAFETVPYKRVDEIIAIRRVID 192
Query: 229 -REWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSSL 285
E+ +KAW+S + + E ++ R + P +G+NC
Sbjct: 193 SEEFRGRKAWISMVYTE---VPKEEVIGRITRKVFEDIPFGSTQRGIGINCT-------- 241
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
K EN+ +V S K + + E++
Sbjct: 242 ----KLENVREIVRVYS-----------------------------KTIIDIGIRKEDVF 268
Query: 346 LVVYPNSGERYDAVNARWIDRD-------LCEPVDKYVTDWLDEGV---ALVGGCCRTYA 395
LV+YP+ G YD W D + C + K V + +++G ++GGCC+T
Sbjct: 269 LVLYPDGGLTYDVNTKTWSDENGMAEVEKWCRLLQKIVEEAVNDGCWGSIIIGGCCKTTP 328
Query: 396 E 396
E
Sbjct: 329 E 329
>gi|85115871|ref|XP_964955.1| hypothetical protein NCU00799 [Neurospora crassa OR74A]
gi|28926753|gb|EAA35719.1| predicted protein [Neurospora crassa OR74A]
Length = 361
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 170/430 (39%), Gaps = 109/430 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAK-DAVVQTHRDFIKAGADIVMTNS 60
V+++DGG + L + DI PLWSS+ L + + D + H F +AGA+I+ T +
Sbjct: 7 VQILDGGMGTTLED-MHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANIISTAT 65
Query: 61 YQASIGGFMEFL-----DLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIA 115
YQ SI GF +D + + ++ A+ L A A +A
Sbjct: 66 YQISINGFAATKAPRSGTVDEEREGIEKEEIPRFLSRAVVLAANAAGTEGK-------VA 118
Query: 116 GSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
S+GPYGA++ +EY G Y EH + +WH+ D + V P
Sbjct: 119 LSLGPYGATMIPSTEYSGRYDPEHQHVQALGKWHKERLD-------LFKDVDP------- 164
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234
+ V +++ T+ PR+ +V A ++L+ + IP S LR P
Sbjct: 165 ------NQVNYIAFETV-----PRLDEIV-AIRNLLSADNIPTS---------LRGRP-- 201
Query: 235 KAWLSFS-CKDDKHISNGESFTQVART--CYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT 291
W+S DD + +G + +V + + + +G+NC + + SL+++ +
Sbjct: 202 -VWISSPYPNDDGKLPDGSTVEEVVKAVLTHREGLETPWGIGINCTKVEKLDSLVKRYED 260
Query: 292 ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN 351
AI+T + E Q AW S LV+YP+
Sbjct: 261 ----------------AIQTCIKNGE-------------QMAWPS---------LVLYPD 282
Query: 352 S--GERYDAVNARWI----DRDLCEPVDKYVTDWLDEG-------VALVGGCCRTYAEDT 398
GE Y+ W ++ P + + ++ +VGGCC+ E
Sbjct: 283 GTKGEVYNTATKTWELSPGHKETEAPWETVLASVVEAARQRGNWKSIVVGGCCKASPEHI 342
Query: 399 LHMKHRLDDW 408
++ L D+
Sbjct: 343 RRLRRTLQDY 352
>gi|418034904|ref|ZP_12673370.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354691570|gb|EHE91489.1| Homocysteine S-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 106
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 9/98 (9%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AG+VG YGA L DG+EYRGDY +SE +H PR++ ++ D++A+ET P E
Sbjct: 13 VAGTVGSYGAYLADGNEYRGDY--ELSELEYLAFHLPRLRQILAEKPDLIALETQPKLDE 70
Query: 221 AQMLCRLLRE----WPHQKAWLSFSCKDDKHISNGESF 254
+ L+E +P ++SF+ KD HIS+G +
Sbjct: 71 PLAVLNWLKENASDYP---VYVSFTLKDATHISDGTTL 105
>gi|392297559|gb|EIW08658.1| Mht1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 324
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 75/341 (21%)
Query: 85 SSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDY---VEHVSE 141
S+ + E+ ++ R ++ RD +IAG A++ Y+ ++ E+ S
Sbjct: 41 SAAPFTSESFWEPSSQERKVVEEMYRDFMIAG------ANILMTITYQANFQSISENTSI 94
Query: 142 ATMAEWHRLITD--DPARDIL-----IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEW 194
T+A + R + R+ + + GS+GP+ A + EY GDY H +
Sbjct: 95 KTLAAYKRFLDKIVSFTREFIGEKRYLIGSIGPWAAHV--SCEYTGDYGPHPENIDYYGF 152
Query: 195 HRPRIQALVE-AGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGES 253
+P+++ + D++ ETIP E + + + + ++ S D+ + +G +
Sbjct: 153 FKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTT 212
Query: 254 FTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP---LVVYPNSGEHIL 307
+++ + N L+ +GVNCV S+LI ++ E++P L+VYPNSGE
Sbjct: 213 LEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALILKMLHEHLPGMPLLVYPNSGEIYN 271
Query: 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRD 367
P +K W + K ++ W
Sbjct: 272 ---------------------PKEKTWHRPTNKLDD-------------------W---- 287
Query: 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+ V ++D G ++GGCCRT +D + +D +
Sbjct: 288 -----ETMVKKFVDNGARIIGGCCRTSPKDIAEIASAVDKY 323
>gi|392925312|ref|NP_508223.2| Protein T13G4.4 [Caenorhabditis elegans]
gi|373219366|emb|CCD67540.1| Protein T13G4.4 [Caenorhabditis elegans]
Length = 304
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 61/271 (22%)
Query: 124 SLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYV 183
++ + +E R Y ++ E + H L T + D+ GSVG D SEY G Y+
Sbjct: 69 TIPENAEKRELYEKYFEETCLKLCH-LTTG--SSDVEAWGSVGTLATMYHDLSEYTGAYM 125
Query: 184 EHVSEATMAEWHRPRIQALVEAGADI--LAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241
+ A + I L + I L ETIP++ E + +L+E+P +A +SF+
Sbjct: 126 DQSEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADEGSVALDVLQEFPEFEAVISFT 185
Query: 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLV-VYP 300
K+ + +GE T VA+ +P Q++ +G+NC P V + +L+ V VYP
Sbjct: 186 FKEHGCLRHGEKITSVAQQ-MKQSP-QVLGIGINCTDPNNVLPALNELQPFAFSEVFVYP 243
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N G+ E I E+ + + L
Sbjct: 244 NKGDSKFLEEGI---DESNVFTKTL----------------------------------- 265
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391
VT W+++GV +GGCC
Sbjct: 266 ---------------VTSWIEKGVTAIGGCC 281
>gi|342321626|gb|EGU13559.1| Hypothetical Protein RTG_00289 [Rhodotorula glutinis ATCC 204091]
Length = 419
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 101/234 (43%), Gaps = 24/234 (10%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLAT--AKDAVVQTHRDFIKAGADIVMTNSY 61
V ++DGG + L ++ LWSS LAT + + + H+ ++ AGADIV T +Y
Sbjct: 15 VLVLDGGMGTTLQAPPFELGLDSALWSSELLATEDGRAQLERLHKTWLGAGADIVETCTY 74
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Q+S+ F+ D S +++ + A+ L + + +R A S+GPY
Sbjct: 75 QSSLPLFLPASPSSADQS-----TALSTMNAALPLAVSCCSSHASSSSRKPTTALSLGPY 129
Query: 122 GASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
G++L+ G EY G Y A A A+D A S E R
Sbjct: 130 GSALQPGQEYSGAYPPPFGPAETA----------AKDAKPACSQEALDLVPLPLDEVRAG 179
Query: 182 YVEHVS--EATMAEWHRPRIQALVEA-----GADILAIETIPASKEAQMLCRLL 228
S E +A WH R+Q ++ G +LA ET+P+ E + R +
Sbjct: 180 LASTASDEEVHLAAWHLQRLQHFSQSPAFDEGIPLLAFETVPSLTEILAIRRAM 233
>gi|407404935|gb|EKF30189.1| cytidine triphosphate synthase, putative, partial [Trypanosoma
cruzi marinkellei]
Length = 439
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 173/469 (36%), Gaps = 140/469 (29%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ V + DG + L ++ D +WSS L + D V + HR +I AG D+++T +
Sbjct: 35 VTGVLIKDGATGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCT 94
Query: 61 YQ-------ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHAR----------- 102
YQ AS E + D + Q+ + ++ K+ E + A+
Sbjct: 95 YQMHEEGCAASKVTMCELV----DRAVQVARHTMPPQKQKGTTEESTAKERRTGGIDVFR 150
Query: 103 -----IRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPAR 157
I+ + R +L+AGS+GPYGA L G EY G+Y H
Sbjct: 151 SALSSIKENGRERVVLLAGSLGPYGALLPGGQEYLGEYSIH------------------- 191
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA-LVEAG------ADIL 210
E + +H R++A L + G D
Sbjct: 192 ------------------------------ETVINAFHARRLEAFLCQVGEKHTFKVDFF 221
Query: 211 AIETIPASKEAQMLC------RLLREWPHQKAWLSFSCKD-------------------- 244
+ET P EA + +LR P ++++ K+
Sbjct: 222 LLETFPRLDEALGILSFVNQHEILRTAPFCFSFIAAPVKNPLPENADDDALDDWWNAAAS 281
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS----SLIEQLKTEN---IPLV 297
+ +G +F + L+ VG NC PL VS +L+++ + + + L+
Sbjct: 282 SIRLPDGNTFEEALSELRKNCGTALVGVGCNCSGPLEVSLVATALLQKRRQDTEGPLVLL 341
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
+YPNSGE + Q R+ P QK + E + + R D
Sbjct: 342 LYPNSGETF---------TDGQW-----RKSPQQKQ----TSTAEGLSIRDLQRILARGD 383
Query: 358 A---VNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
+ +++ + L + + T+WL E + + G CCR+ ED +K
Sbjct: 384 GDLIIYMKFLLQLLQQRSE--ATEWLFE-IIVCGACCRSTPEDIAALKQ 429
>gi|322712417|gb|EFZ03990.1| hypothetical protein MAA_01064 [Metarhizium anisopliae ARSEF 23]
Length = 343
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 1 MANVKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
M + ++DGG + L Y PLWSS L + ++Q DF DI++T
Sbjct: 1 MKRILILDGGLGTSLEQNYNTKFNPSTPLWSSDLLVSDPTTLLQCQSDFAAVPVDILLTA 60
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+YQ SI GF + + +++ A+A+ R +A S+G
Sbjct: 61 TYQVSIAGFAGTKTPKFPHGISPLDIP-PFMETAVAVAENATRAHHGS------VALSLG 113
Query: 120 PYGASLRDGSEYRGDYVE-HVSEATMAEWHR 149
PYGA + EY G+Y + H S+ + EWHR
Sbjct: 114 PYGACMIPSQEYSGEYDDAHDSQEALREWHR 144
>gi|254586065|ref|XP_002498600.1| ZYRO0G14212p [Zygosaccharomyces rouxii]
gi|238941494|emb|CAR29667.1| ZYRO0G14212p [Zygosaccharomyces rouxii]
Length = 325
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 124/317 (39%), Gaps = 80/317 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLA-----------TAKDAVVQTHRDFIKAG 52
V ++DGG ++L G I G P+WS+ T +D V + ++ AG
Sbjct: 15 VLVMDGGQGTELENR-GMNISG-PIWSTVPFTKEEFWNFDQPYTDRDVVNSMFKAYVDAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARD 111
A ++ T +YQ S D+ + Y QL+ V + + I D
Sbjct: 73 AQLLSTVTYQTSYKTICAHTDIHTRTQYDQLLDRIVGFCRRCI--------------GDD 118
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GPY A + G+EY GDY GP
Sbjct: 119 HYLVGSIGPYAAHV--GAEYTGDY------------------------------GPKPEE 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW 231
+ DY ++ E +A ++R DI+ +ET+P E + +
Sbjct: 147 I--------DYWQYF-EPQVANFNR-------NETIDIIGLETVPNVHELKSILSWDETK 190
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC----VRPLMVSSLIE 287
+ ++S DD ++ +G Q+ N + L+ VG+NC V +S L E
Sbjct: 191 ISKPFYVSLCVGDDGNLRDGTPLEQLVPLFANRSNKNLLLVGINCCSLSVSSQALSHLNE 250
Query: 288 QLKTENIPLVVYPNSGE 304
L + + L+VYPNSGE
Sbjct: 251 ILASTPMGLLVYPNSGE 267
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNC----VRPLMVSPLIEQLKTENIPLVVY 565
DD ++ +G Q+ N + L+ VG+NC V +S L E L + + L+VY
Sbjct: 203 DDGNLRDGTPLEQLVPLFANRSNKNLLLVGINCCSLSVSSQALSHLNEILASTPMGLLVY 262
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 263 PNSGEIYD 270
>gi|342869606|gb|EGU73226.1| hypothetical protein FOXB_16251 [Fusarium oxysporum Fo5176]
Length = 342
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 156/431 (36%), Gaps = 126/431 (29%)
Query: 2 ANVKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ + ++DGG + L S Y PLWSS+ L + + + DF D+++T +
Sbjct: 3 SKILILDGGLGTSLESKYSITFSRSTPLWSSHLLVSDQSTLQSCQSDFGAVPVDVLLTAT 62
Query: 61 YQASIGGFMEFLDLDY------DSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
YQ S+ GF + D+ ++ + + +V + A+ + +
Sbjct: 63 YQVSLHGFADTRTDDFPEGIPRETVPRFLDDAVSIAQRAVGDKGC--------------V 108
Query: 115 AGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLR 173
A S+GPYGA + G EY G Y EH S A + WHR
Sbjct: 109 ALSIGPYGACMIPGQEYSGKYDAEHDSLADLEAWHR------------------------ 144
Query: 174 DGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP------ASKEAQMLCRL 227
E G + E VS+ ++ +A+ETIP A ++A
Sbjct: 145 ---ERLGVFAE-VSD--------------IQKRVGYVALETIPRVDEIIAMRKALAATPT 186
Query: 228 LREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSSL 285
L + P+ A L S + D + +G S + + +G+NC + + L
Sbjct: 187 LSDLPYWTACL--SPEKDLKMPDGNSIEAAVEAMLDPEVSTKLPWGIGINCTKVDKLDQL 244
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
++ + +V G+ + EWP
Sbjct: 245 LQIFERTVAGMV---EKGK--------------------ITEWPA--------------- 266
Query: 346 LVVYPN--SGERYDAVNARWIDRD------------LCEPVDKYVTDWLDEGVALVGGCC 391
LV+YP+ +GE Y+ +W D E V K D + LVGGCC
Sbjct: 267 LVLYPDGTNGEVYNTTTQKWEMPDGVETHRRSSWEHQLETVVKATEDRGNWPAILVGGCC 326
Query: 392 RTYAEDTLHMK 402
R +ED ++
Sbjct: 327 RAGSEDIKKLR 337
>gi|393217074|gb|EJD02563.1| Homocysteine S-methyltransferase [Fomitiporia mediterranea MF3/22]
Length = 378
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 144/341 (42%), Gaps = 84/341 (24%)
Query: 4 VKLIDGGFSSQLS-TYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ L+DGGF + L + DI PLWS+ + D +++ H +F+ AG+DI++T +YQ
Sbjct: 9 ILLLDGGFGTTLEDVFQKDI--SSPLWSASLVEKEPDVIIKAHSEFLNAGSDIILTATYQ 66
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHAR--IRSDDPARDILIAGSVGP 120
S F D + +++ +++ + L AT AR + A+ +L S+GP
Sbjct: 67 CSFKTF--------DRAGYSRPDAINLMRKTVQL-ATQARDLHQQRKQAKVVL---SLGP 114
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYG-----ASLRDG 175
+GA+L E+ G Y PYG A+ +
Sbjct: 115 FGAALTTAQEFDGIYPP-----------------------------PYGPRAFSANGPNT 145
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAG-------ADILAIETIPASKEAQ----ML 224
+ + E + ++ +H R++ D +A ETIP ++E + +
Sbjct: 146 NAFHTAVSEEAAILSLRNFHYDRLRVFAMKKDDEVWNLIDGIAFETIPLAREVKAIRLAM 205
Query: 225 CRL---LREWPHQKA--WLSFSCKDDKH---ISNGESFTQVARTCYNMNPDQL------I 270
RL LREW ++ W+S H +G+ + + PD
Sbjct: 206 ARLNARLREWGQEEKPWWISTVWPSGVHPQESGSGDRLSGKDVAEALLLPDSTGDLPVPS 265
Query: 271 AVGVNC--VRPL--MVSSL---IEQLKTENIP-LVVYPNSG 303
VG+NC ++ L +VS L I+++K P LV+YPN G
Sbjct: 266 GVGINCTHIKDLDEVVSKLRRAIDEIKPNRKPSLVLYPNGG 306
>gi|401837865|gb|EJT41719.1| MHT1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 325
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 132/411 (32%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWS-------SYFLATAKD--AVVQTHRDFIKAGAD 54
V ++DGG ++L +I G P+WS S++ ++ D V + +RDF+ AGA+
Sbjct: 17 VLVLDGGQGTELENRGINI--GGPVWSATPFTSDSFWEQSSHDREVVEEMYRDFMNAGAN 74
Query: 55 IVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
++MT + Y ++++ I +
Sbjct: 75 VLMT---------------ITYQANFKSISEN---------------------------- 91
Query: 115 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
S++ S Y G +++ + T R I ++ + GS+GP+ A +
Sbjct: 92 --------TSIQTLSAYNG-FLDRIVSFT----RRFIGEER----YLVGSIGPWAAHV-- 132
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLREWPH 233
SEY G+Y H + + +P++ + E D++ ET+P E + + +
Sbjct: 133 SSEYTGNYGPHPEDIDYYNFFKPQLDSFNENKDIDLIGFETVPNFHELKAILSWGEDIIS 192
Query: 234 QKAWLSFSCKDDKHISNGESFTQVARTCYNMNP---DQLIAVGVNCVR----PLMVSSLI 286
+ ++ S D+ + +G + +V+ + L+ +GVNC+ L++ +L
Sbjct: 193 KPFYVGLSVHDNGLLRDGTTMEEVSAHIKGLGSRINKHLLLMGVNCISFNRSTLILRTLH 252
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + PL+VYPNSGE + KE WP K
Sbjct: 253 ESLP--DTPLLVYPNSGE-------VYDVKEKTW------HWPTDKP------------- 284
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
E D V ++D G ++GGCCRT +D
Sbjct: 285 -----------------------ESWDITVKTFIDSGARIIGGCCRTSPKD 312
>gi|359408022|ref|ZP_09200494.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676779|gb|EHI49128.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 302
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 142/415 (34%), Gaps = 131/415 (31%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
MA++ +DGG ++ HPLWS + + V HRDFI AGA ++ N+
Sbjct: 1 MADLSFLDGGLGQEIQNRAS--AQPHPLWSVKVMYDEPELVSAVHRDFITAGARVITANT 58
Query: 61 YQASI------GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
Y AS G + D+ ++++ L ++ +D ++ DP D+ +
Sbjct: 59 YTASPPRLRRDGDLRQIADI-HNTALALARAEMD---------------KAGDP--DLQL 100
Query: 115 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
AG + P G YV VS +G SL D
Sbjct: 101 AGCLPP----------LVGSYVAEVSM-------------------------DFGDSLTD 125
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234
YR ++ AL D+ IETI EA+ ++E
Sbjct: 126 ---YR------------------QLVALQSGKVDLFLIETISNIAEAKAALTAVKEA-DM 163
Query: 235 KAWLSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292
++ + DD + +GE+ + + PD L+ VNC P VS + L
Sbjct: 164 PGFVGLTICDDHSNRLRSGEALSDALDQLLPLGPDGLM---VNCSLPEAVSKAMSVLAGL 220
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
IP Y N I A++ P A + R +A+ F+C
Sbjct: 221 PIPFGGYANGFTSIDALK--PGGTVASLSARTDL---GPEAYADFACS------------ 263
Query: 353 GERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
W++ G ++GGCC H+ RL D
Sbjct: 264 --------------------------WVEAGATIIGGCCEVGPAHIAHLAQRLRD 292
>gi|429861672|gb|ELA36347.1| homocysteine s-methyltransferase [Colletotrichum gloeosporioides
Nara gc5]
Length = 355
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 168/448 (37%), Gaps = 138/448 (30%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
+ V ++DGG + L G + PLWS++ L +D ++ +DF DI++T
Sbjct: 9 SRVLILDGGLGTSLEDKYGLKFNSATTPLWSTHLLVDGQDTLLACQKDFGHVPVDIILTA 68
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSV 118
+YQ SI GF ++ + ++++ +++K+A+ + R A A S+
Sbjct: 69 TYQLSIHGFANTRTPEHPNGID--RATIGNFIKDAVRIAHDAGR------ANGAKTALSI 120
Query: 119 GPYGASLRDGSEYRGDYVE-HVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
GPYGA + G EY G Y E H S + +WH
Sbjct: 121 GPYGACMIPGQEYSGAYDEDHDSLEKLRDWH----------------------------- 151
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCR------ 226
R+Q AGA +AIETIP + E + + +
Sbjct: 152 ------------------FERLQLFNNAGAFASPVSYVAIETIPRADEIKAIRQALDKTG 193
Query: 227 LLREWPHQKAWL-SFSCKDDKHISNGESFTQVARTCYNMNPD----QLIAVGVNCVRPLM 281
+L W+ S DD+ + +G S + ++P+ + +G+NC +
Sbjct: 194 VLATGSALPFWIASLFPGDDERLPDGSSIKEAVAAM--LSPEIAACRPWGIGINCTKVWK 251
Query: 282 VSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
+ SL++ ++ L+ + I+A
Sbjct: 252 LESLVKSYESAVQELIT-----DGIVA--------------------------------- 273
Query: 342 ENIPLVVYPN--SGERYDAVNARWIDRDLCEPVDKYVTDW---LDEGVA----------- 385
E L++YP+ +GE Y+ +W +L E + T W L E VA
Sbjct: 274 EAPALILYPDGTNGEVYNTTTQKW---ELPEGSNHPKTSWEAQLTEVVANAQSRGIWKQI 330
Query: 386 LVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
+VGGCC+ D RL V GLS
Sbjct: 331 VVGGCCKASHADIA----RLRATVEGLS 354
>gi|310800639|gb|EFQ35532.1| homocysteine S-methyltransferase [Glomerella graminicola M1.001]
Length = 355
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 161/445 (36%), Gaps = 136/445 (30%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
+ ++DGG + L G + PLWS++ L +D ++ +DF DI++T +Y
Sbjct: 11 ILVLDGGLGTSLEDKYGIGFESATTPLWSTHLLVDGQDTLLACQKDFGNVPVDIILTATY 70
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPY 121
Q SI GF Y + + +++++AI + R A A S+GPY
Sbjct: 71 QLSIDGFANTRTAKYPNGID-CAAIRNFIQDAIRIAHEAGR------AHGTKTALSIGPY 123
Query: 122 GASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
GA + G EY G Y +H S + +WH
Sbjct: 124 GACMIPGQEYSGAYDSDHDSLEKLRDWH-------------------------------- 151
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGA-----DILAIETIPASKEAQMLCRLL------- 228
R+Q +AGA +A+ETIP S E + + + L
Sbjct: 152 ---------------LERLQLFKDAGAFSSPVAYVAVETIPRSDEIKAVRQALDRIGLFA 196
Query: 229 REWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA----VGVNCVRPLMVSS 284
E P + + D + +G S + + PD ++ +G+NC + + S
Sbjct: 197 TENPLPFWIATLFPRQDNCLPDGSSVKEAVTAM--LGPDVAMSRPWGIGINCTKVWKLES 254
Query: 285 LIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
LI+ ++ L+ G AI PA
Sbjct: 255 LIKSYESAVQELI---QEG----AIAEAPA------------------------------ 277
Query: 345 PLVVYPN--SGERYDAVNARWIDRDLCEPVDKYVTDW---LDEGVA-----------LVG 388
LV+YP+ +GE Y+ +W +L VT W L + VA +VG
Sbjct: 278 -LVLYPDGTNGEVYNTATQKW---ELPGGSHHPVTSWEAQLSQVVAGAQSRGLWNQIVVG 333
Query: 389 GCCRTYAEDTLHMKHRLDDWVSGLS 413
GCC+ D RL V GLS
Sbjct: 334 GCCKASHSDI----ARLRAAVEGLS 354
>gi|350295854|gb|EGZ76831.1| Homocysteine S-methyltransferase [Neurospora tetrasperma FGSC 2509]
Length = 361
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 173/426 (40%), Gaps = 101/426 (23%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAK-DAVVQTHRDFIKAGADIVMTNS 60
V ++DGG + L + DI PLWSS+ L + + D + H F +AGA+I+ T +
Sbjct: 7 VHILDGGMGTTLED-MHDITFSFETPLWSSHLLVSGEEDKLSDCHEAFKQAGANIISTAT 65
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA-RDILIAGSVG 119
YQ SI GF + + + +D KE I + A + + + A + +A S+G
Sbjct: 66 YQISINGFAA-TKSPKSGTLDVEREGID--KEEIPRFLSRAVVLAANAAGTEGKVALSLG 122
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEY 178
PYGA++ +EY G Y EH + +WH+ D + V P
Sbjct: 123 PYGATMIPSTEYSGRYDPEHQDVQALEKWHKERLD-------LFKDVDP----------- 164
Query: 179 RGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
V +++ T+ PR+ +V A ++L+ + IP S LR P W+
Sbjct: 165 --KQVNYIAFETV-----PRLDEIV-AIRNLLSADHIPTS---------LRGRP---VWI 204
Query: 239 SFS-CKDDKHISNGESFTQVART--CYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP 295
S DD + +G + +V + + + +G+NC + + SL+++ +
Sbjct: 205 SSPYPNDDGKLPDGSTVEEVVKAVLTHREGLETPWGIGINCTKVEKLDSLVKKYED---- 260
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN--SG 353
AI+T + E Q AW S LV+YP+ +G
Sbjct: 261 ------------AIQTCIKNGE-------------QMAWPS---------LVLYPDGTNG 286
Query: 354 ERYDAVNARWI----DRDLCEPVDKYVTDWLDEG-------VALVGGCCRTYAEDTLHMK 402
E Y+ W + P + + + ++ +VGGCC+ E ++
Sbjct: 287 EVYNTATKTWELSPGHKQSEAPWETVLANVVEAARQRGTWKSIVVGGCCKASPEHIRRLR 346
Query: 403 HRLDDW 408
L D+
Sbjct: 347 RTLQDY 352
>gi|366993342|ref|XP_003676436.1| hypothetical protein NCAS_0D04940 [Naumovozyma castellii CBS 4309]
gi|342302302|emb|CCC70075.1| hypothetical protein NCAS_0D04940 [Naumovozyma castellii CBS 4309]
Length = 327
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 157/415 (37%), Gaps = 130/415 (31%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
V ++DGG ++L ++ +P+WS+ F++ + + V + DF+ AGA
Sbjct: 17 VLVLDGGQGTELENRGINV--ANPVWSTIPFVSESFWSDKSSNDRQIVKEMFEDFLAAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+I+MT +YQ S E D+ Y +L+ V + ++ I +
Sbjct: 75 EILMTTTYQTSFKSVSENTDIKTLQEYNELLNRIVSFSRDCIGEQK-------------- 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ G +GP+GA + +E+ GDY H ++ + P D A
Sbjct: 121 YLIGCIGPWGAHV--CAEFNGDYGAHPENIDYYQYFK-----PQLDNFFANE-------- 165
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP 232
D++ ET+P E + + +
Sbjct: 166 ---------------------------------NLDLIGFETVPNVNELKAILSWDEKIL 192
Query: 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLIEQ 288
+ ++ S ++ + +G + ++ ++ NP+ L+ +G+NCV S++E
Sbjct: 193 SKPFYIGLSVHENGVLRDGTTMEEIGNIFKSLGNKVNPN-LLLLGINCVSFNHSPSILED 251
Query: 289 LKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
+ ++PL+ YPNSGE +T+ +K WL
Sbjct: 252 IHKNLPDMPLIAYPNSGE---VYDTV------------------KKIWL----------- 279
Query: 347 VVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHM 401
P + E + W ++ V +++ G ++GGCCRT +D L +
Sbjct: 280 ---PQNSEN----SLTW---------EQVVKRYIEAGARIIGGCCRTTPKDILEI 318
>gi|400597816|gb|EJP65540.1| homocysteine S-methyltransferase [Beauveria bassiana ARSEF 2860]
Length = 361
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 160/428 (37%), Gaps = 98/428 (22%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH-PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V ++DGG + L D PLWSS L + + + DF + D+++T +YQ
Sbjct: 5 VLILDGGLGTSLEQKYSCKFDHRTPLWSSDLLVSDPALLERCQADFGRVPVDVLLTATYQ 64
Query: 63 ASIGGFMEFLDLDYDSSYQ--LIKSSVD-YVKEAIAL---EATHARIRSDDPARDILIAG 116
S+ GF ++ + ++ + Y++EA+ + AT R IA
Sbjct: 65 VSVAGFARTRTRTSSPAHPDGIPRARIPHYIREAVRIAHRAATEGR-----------IAL 113
Query: 117 SVGPYGASLRDGSEYRGDYVE-HVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
SVGPYGA + EY G Y + H SE + WHR R L A +V +G
Sbjct: 114 SVGPYGACMTPSQEYSGAYDDAHSSEEALYAWHR------DRLALFAAAV--------EG 159
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235
+ + V+ T+ PR+ +I+A+ A+ A P
Sbjct: 160 CDEAARRIGFVALETV-----PRVD-------EIVAMRRALAAAAAAAAAAATSSGPLAA 207
Query: 236 AWLSFSC---KDDKHISNGESFTQVARTCYNMNPDQLI-AVGVNCVRPLMVSSLIEQLKT 291
SC DD+ + +G S R + P VG+NC + + +L+ + +
Sbjct: 208 VPCWVSCLFPGDDECLPDGSSVEAAVRAMLDPTPAPPAWGVGINCTKVHKLDALLRKYEA 267
Query: 292 ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN 351
A+E + +E WP LV+YP+
Sbjct: 268 ----------------AVEKLRREEEGMA----TEAWPA---------------LVLYPD 292
Query: 352 --SGERYDAVNARWIDRDLCEPVDKYV-TDWLDEGVA-----------LVGGCCRTYAED 397
+GE Y+ V W ++ ++ L E V +VGGCC AED
Sbjct: 293 GTNGEVYNTVTQTWESKEEAGAAERGPWAKQLAEVVRATRRRGRWRQIVVGGCCMAGAED 352
Query: 398 TLHMKHRL 405
++ L
Sbjct: 353 IAALRAEL 360
>gi|408392959|gb|EKJ72235.1| hypothetical protein FPSE_07584 [Fusarium pseudograminearum CS3096]
Length = 341
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 161/436 (36%), Gaps = 130/436 (29%)
Query: 2 ANVKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ + ++DGG + L S Y PLWSS+ L + + DF D+++T +
Sbjct: 3 SKILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDFGAVPVDVLLTAT 62
Query: 61 YQASIGGFM-----EFLD-LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
YQ S+ GF EF + + ++ + + SV + A+ + +
Sbjct: 63 YQVSLHGFADTRTEEFPEGISRENVPRFLDDSVRIAERAVGDKGC--------------V 108
Query: 115 AGSVGPYGASLRDGSEYRGDYVE-HVSEATMAEWHRLITDDPARDILIAGSVGPYGASLR 173
A S+GPYGA + G EY G Y E H S + WHR
Sbjct: 109 ALSIGPYGACMIPGQEYSGKYDEKHDSLQDLESWHR------------------------ 144
Query: 174 DGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP------ASKEAQMLCRL 227
E G + E V++ ++ +A+ETIP A ++A
Sbjct: 145 ---ERLGVFSE-VND--------------IQKRLGYVALETIPRLDEIIAMRKALAATPA 186
Query: 228 LREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSSL 285
L + P+ A L S + D + +G S + I +G+NC + + SL
Sbjct: 187 LSKLPYWTALL--SPEKDLRLPDGNSIESAVEAMLDPEVSANIPWGIGINCTKVDKLDSL 244
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
++ ++ +V G+ + EWP
Sbjct: 245 LQIFESTVSNMV---EKGK--------------------ITEWPA--------------- 266
Query: 346 LVVYPN--SGERYDAVNARWIDRDLCEPVDKYVTDW---------LDEG-----VALVGG 389
LV+YP+ +GE Y+ +W D E ++ + W EG LVGG
Sbjct: 267 LVLYPDGTNGEVYNTTTQKWEMPDGAE--NQRRSSWEGQLEDVVKATEGRGKWPAILVGG 324
Query: 390 CCRTYAEDTLHMKHRL 405
CCR +ED ++ RL
Sbjct: 325 CCRAGSEDIKKLRDRL 340
>gi|46134149|ref|XP_389390.1| hypothetical protein FG09214.1 [Gibberella zeae PH-1]
Length = 341
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 161/436 (36%), Gaps = 130/436 (29%)
Query: 2 ANVKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
+ + ++DGG + L S Y PLWSS+ L + + DF D+++T +
Sbjct: 3 SKILILDGGLGTSLESKYSVTFSRSTPLWSSHLLVADQPTLQSCQSDFGAVPVDVLLTAT 62
Query: 61 YQASIGGFM-----EFLD-LDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
YQ S+ GF EF + + ++ + + SV + A+ + +
Sbjct: 63 YQVSLHGFADTRTEEFPNGISRENVPRFLDDSVSIAERAVGDKGC--------------V 108
Query: 115 AGSVGPYGASLRDGSEYRGDYVE-HVSEATMAEWHRLITDDPARDILIAGSVGPYGASLR 173
A S+GPYGA + G EY G Y + H S + WHR
Sbjct: 109 ALSIGPYGACMIPGQEYSGKYDDKHDSLQDLESWHR------------------------ 144
Query: 174 DGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP------ASKEAQMLCRL 227
E G + E V++ ++ +A+ETIP A ++A
Sbjct: 145 ---ERLGVFSE-VND--------------IQKRLGYVALETIPRLDEIIAMRKALAATPA 186
Query: 228 LREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI--AVGVNCVRPLMVSSL 285
L + P+ A L S + D + +G S + I +G+NC + + SL
Sbjct: 187 LSKLPYWTALL--SPEKDLRLPDGNSIEAAVEAMLDPEVSANIPWGIGINCTKVDKLDSL 244
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
++ ++ +V G+ + EWP
Sbjct: 245 LQIFESTVSNMV---EKGK--------------------IAEWPA--------------- 266
Query: 346 LVVYPN--SGERYDAVNARWIDRDLCEPVDKYVTDW---------LDEG-----VALVGG 389
LV+YP+ +GE Y+ +W D E ++ T W EG LVGG
Sbjct: 267 LVLYPDGTNGEVYNTTTQKWEMPDGAE--NQRRTSWEGQLEDVVKATEGRGKWPAILVGG 324
Query: 390 CCRTYAEDTLHMKHRL 405
CCR +ED ++ RL
Sbjct: 325 CCRAGSEDIKKLRDRL 340
>gi|255712221|ref|XP_002552393.1| KLTH0C03850p [Lachancea thermotolerans]
gi|238933772|emb|CAR21955.1| KLTH0C03850p [Lachancea thermotolerans CBS 6340]
Length = 329
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 157/417 (37%), Gaps = 141/417 (33%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLA----TAKDA-------VVQTHRDFIKA 51
V ++DGG ++L I +P+WS+ F++ TA D+ V + + DF+KA
Sbjct: 17 VLVLDGGQGTELENR--GIKVANPVWSTIPFISDSFWTANDSSSKDRQIVKEMYEDFLKA 74
Query: 52 GADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARD 111
GA ++MT +YQAS E +S+ ++E AL + D
Sbjct: 75 GARVLMTVTYQASFKSVSE-------------NTSITTLEEYDALLSRIVSFSRSCIGDD 121
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ G +GP+GA + SE+ GDY
Sbjct: 122 KWLVGCIGPWGA--HNCSEFTGDY------------------------------------ 143
Query: 172 LRDGSE-YRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLR 229
GSE + DY+++ +P++ V D++ ETIP E + +
Sbjct: 144 ---GSEPEKIDYLQYF---------KPQLDNFTVNDDLDLIGFETIPNIHELRAILSWDT 191
Query: 230 EWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCV----RPLM 281
+ ++ S + + +G + +VA ++ NP+ + +G+NCV P +
Sbjct: 192 TILPKPFYIGLSVHEHGVLRDGTTMHEVAELIKSLGDKINPN-FVLLGINCVSYNHSPEI 250
Query: 282 VSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKT 341
+ SL +++ +PL+ YPNSGE
Sbjct: 251 LRSLHQEIP--ELPLIAYPNSGE------------------------------------- 271
Query: 342 ENIPLVVYPNSGERYDAVNARWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
YD V W + D D+ V ++D G ++GGCCRT +D
Sbjct: 272 -------------VYDTVKKIWNPKGDHTLTWDQVVKSYIDSGARIIGGCCRTSPKD 315
>gi|71401930|ref|XP_803936.1| homocysteine S-methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70866628|gb|EAN82085.1| homocysteine S-methyltransferase, putative [Trypanosoma cruzi]
Length = 410
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 166/458 (36%), Gaps = 134/458 (29%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V + DG + L ++ D +WSS L + D V + HR +I AG D+++T +YQ
Sbjct: 8 GVLIKDGAMGTLLESWDVDYAKAGSMWSSSVLLSEMDLVKRAHRAYIDAGCDVLLTCTYQ 67
Query: 63 -------ASIGGFMEFLDLDYDSSYQLI--KSSVDYVKEAIALEA----------THARI 103
AS E +D ++ + + +E+ A E + I
Sbjct: 68 MHEEGCAASKVTMCELVDRAVQAARHTMPKQKQKGLTEESTAKERRTGGIDVFRYALSSI 127
Query: 104 RSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAG 163
+ + R +L+AGS+GPYG+ L G EY G+Y H EA + +H AR +
Sbjct: 128 KDNGQERVVLLAGSLGPYGSFLPGGQEYLGEYSIH--EAVINSFH-------ARRL---- 174
Query: 164 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQM 223
+ E H ++ D +ET P EA
Sbjct: 175 ---------------------EAFLCNVGEKHAFKV--------DFFLLETFPRLDEALG 205
Query: 224 LC------RLLREWPHQKAWLSFSCK-------DDKHISN-------------GESFTQV 257
+ +LR P ++++ K DD + N G +F
Sbjct: 206 ILSFVNQHEILRTAPFCFSFIAAPVKNPLPENADDDALDNWWNAAASSIRLPDGNTFEGA 265
Query: 258 ARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL------KTEN-IPLVVYPNSGEHIL--- 307
L+ +G NC PL VS + L TE + L++YPNSGE
Sbjct: 266 LSELRGNCGTALVGMGCNCSGPLEVSLVATALLHKKRQGTEGPLVLLLYPNSGEKFTDGQ 325
Query: 308 ------AIETIPASKEAQM-LCRLL-REWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
I+T A K + L R+L R N ++ F + +R +A
Sbjct: 326 WKKPPQQIQTSAAKKLSMRDLKRILARGGGNLITFMKFLLQLLQ----------QRPEA- 374
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
TDWL E + + G CCR+ ED
Sbjct: 375 -----------------TDWLFE-IIVCGACCRSTPED 394
>gi|367015047|ref|XP_003682023.1| hypothetical protein TDEL_0E05690 [Torulaspora delbrueckii]
gi|359749684|emb|CCE92812.1| hypothetical protein TDEL_0E05690 [Torulaspora delbrueckii]
Length = 328
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 64/275 (23%)
Query: 136 VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGASLRDGSEYRGDYVEHVSE 188
VE+ T+AE++ L+ +R + + GSVGP+GA + E+ G+Y H
Sbjct: 89 VENTQFKTLAEYNTLLDRIVKFSRSCIGDERYLIGSVGPWGAHV--CCEFTGNYGLHPES 146
Query: 189 ATMAEWHRPRIQALV-EAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKH 247
E+ +P++ + D++ ET+P E + + + ++ S ++
Sbjct: 147 IDYYEYFKPQLDNFNGQDEIDLIGFETVPNFHELKAILSWDETKIAKPFYIGLSVHNNGV 206
Query: 248 ISNGESFTQVARTCYNMN---PDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGE 304
+ +G + ++ + + +GVNCV + +S +
Sbjct: 207 LRDGTTMEEIGEYIKGLGEKISSNFLLLGVNCVS--------------------FNDSSD 246
Query: 305 HILAI-ETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARW 363
+ +I + +P ++PL+ YPNSGE YD W
Sbjct: 247 MVKSIHKALP-----------------------------DMPLLAYPNSGEVYDTEKKIW 277
Query: 364 ID-RDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
D +D + D V ++D G ++GGCCRT D
Sbjct: 278 FDNKDKLDSWDSVVRSYIDNGARIIGGCCRTSPRD 312
>gi|358381330|gb|EHK19006.1| hypothetical protein TRIVIDRAFT_44209 [Trichoderma virens Gv29-8]
Length = 348
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 153/430 (35%), Gaps = 121/430 (28%)
Query: 4 VKLIDGGFSSQL-STYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V +DGG + L Y PLWSS+ L + +++ +DF D+++T +YQ
Sbjct: 10 VSFLDGGLGTSLEQNYSIAFGPDTPLWSSHLLISDPSTLLRCQKDFGDVPVDMILTATYQ 69
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
S+ GF ++ S + V E A H ++ P+ + + S+GPYG
Sbjct: 70 VSLHGFAGTKTAEF--SDGIAPEQVPRFLET----AVHIAEQAKQPSSAVAL--SIGPYG 121
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
A + EY G Y D + GD
Sbjct: 122 ACMIPSQEYSGKY--------------------------------------DAAYDSGD- 142
Query: 183 VEHVSEATMAEWHRPRIQAL-----VEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237
+ WHR R++ V +A+ET+P E + R + P +
Sbjct: 143 -------ALFAWHRERMEVFASIKDVRQRVRYIALETVPRLDEVIAMRRAMSAVPGLSSG 195
Query: 238 LSF--SC---KDDKHISNGESFTQVARTCYN--MNPDQLIAVGVNCVRPLMVSSLIEQLK 290
+ F SC +D+ I +G S V R + + P VG+NC + + SL+ + +
Sbjct: 196 VPFWISCLFPNEDEKIPDGSSPEAVIRAMLDPSIAPAVPWGVGINCTKVWKLESLLRRYE 255
Query: 291 TENIPLVVYPNSGEHILAIETIPASKEAQMLCR-LLREWPNQKAWLSFSCKTENIPLVVY 349
+ +Q+L L+ +WP LV+Y
Sbjct: 256 ------------------------AGVSQLLQEGLVEKWPA---------------LVLY 276
Query: 350 PN--SGERYDAVNARWIDRDLCE-----PVDKYVTDWLDEGVA-------LVGGCCRTYA 395
P+ +GE Y+ W E P + + + + A +VGGCCR
Sbjct: 277 PDGTNGEVYNTTTKTWELPQGTEQKDRIPWETQLAEVIRAAEARGKWSHIIVGGCCRARP 336
Query: 396 EDTLHMKHRL 405
D ++ L
Sbjct: 337 SDIQKLRSCL 346
>gi|390601844|gb|EIN11237.1| Homocysteine S-methyltransferase, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 378
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 25 GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDY--DSSYQL 82
HPLWS+ LA D ++ H F++AGA +++T+SYQ S F F Y + + L
Sbjct: 13 AHPLWSAKLLADDPDPIIAAHLGFLRAGARVILTSSYQCS---FDTFARAGYPPEQARSL 69
Query: 83 IKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDY 135
+ SV A L + R D DI IA S+GPYGA+ EY G Y
Sbjct: 70 MLQSVSLASSAAHLFLSE---RPDLSRSDITIALSLGPYGAACVPTQEYDGCY 119
>gi|262183691|ref|ZP_06043112.1| homocysteine methyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 225
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPA 217
D+L+A S+GPYGA G++Y G Y + + WH RI L + AD L ETIP
Sbjct: 33 DLLVAASIGPYGAGPGKGTDYDGAY--DLRRGELQRWHARRIAVLADTDADFLLAETIPN 90
Query: 218 SKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGES-FTQVARTCYNMNPDQLIAVGVNC 276
EA L LL+ P F+ I+ ++ +QV + +L A+GVNC
Sbjct: 91 VDEAAALLELLKAQPK-----PFALSITGAIAADQAKLSQVIELANQSS--RLGALGVNC 143
Query: 277 VRPLMVSSLIEQLKT-ENIPLVVYPNSGE 304
V P +++ L+ + PL+ PNSGE
Sbjct: 144 VSPSQARAVVATLRAGTDKPLLACPNSGE 172
>gi|320034205|gb|EFW16150.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 278
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 20/137 (14%)
Query: 27 PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYD--------- 77
PLWSS+ L + + + HR ++ AGADIV+T +YQAS GF + +
Sbjct: 19 PLWSSHLLLSHPTTLSEIHRSYVDAGADIVLTATYQASFEGFARTAIVPANVPADHKQDE 78
Query: 78 ----SSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL-RDGSEYR 132
++Y+ + ++ Y++ AI L + S P +A S+GPYGA++ +EY
Sbjct: 79 RHGHATYRPMDAT-RYMRSAIPLAYSSFNFSSKPPR----VALSLGPYGATMCPVSAEYT 133
Query: 133 GDYVEHVSE-ATMAEWH 148
G Y E +S A + WH
Sbjct: 134 GIYPEEMSNTAALEAWH 150
>gi|401841639|gb|EJT43998.1| SAM4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 325
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 123/295 (41%), Gaps = 73/295 (24%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+T D +RD + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIKTLSEYNNLLTRIVDFSRDCIGENKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY E+ +P++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGPDPESIDFYEYFKPQLDNFNKNDKLDLIGFETIPNVHELRAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVR----PLMV 282
+ ++ S + + +G + +VA+ + NP+ +G+NCV P ++
Sbjct: 191 ILSKPFYIGLSVHEHGVLRDGTTMEEVAKVIKGLGDKINPN-FSLLGINCVSFNQSPDIL 249
Query: 283 SSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
SL + L ++ L+ YPNSGE + E +K WL
Sbjct: 250 ESLHQALP--DMALLAYPNSGE-VYDTE--------------------KKIWL------- 279
Query: 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
PNS D +N+ W D V ++D G ++GGCCRT D
Sbjct: 280 -------PNS----DKLNS-W---------DTVVKQYIDSGARIIGGCCRTSPND 313
>gi|151942983|gb|EDN61326.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|207340789|gb|EDZ69030.1| YPL273Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323346059|gb|EGA80349.1| Sam4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350066|gb|EGA84233.1| Sam4p [Saccharomyces cerevisiae VL3]
Length = 261
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 9 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 68
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 69 I--CREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 126
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV ++
Sbjct: 127 ILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDIL 185
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + +P N+ L
Sbjct: 186 ESLH-------------------QALP-----------------------------NMAL 197
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 198 LAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 249
>gi|418407395|ref|ZP_12980713.1| S-methyltransferase [Agrobacterium tumefaciens 5A]
gi|358006539|gb|EHJ98863.1| S-methyltransferase [Agrobacterium tumefaciens 5A]
Length = 304
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +L ++ P WS+ L + D V Q H++FI+AGAD+V TNS
Sbjct: 1 MGTIRILDGGMSRELQRLGAELK--QPEWSALALINSPDIVRQVHQEFIEAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q +S+ IAL AR +D RD+L+AGS
Sbjct: 59 YALVPFHIG----------EERFQKDGASL------IALSGRLAREAADASGRDVLVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|6324982|ref|NP_015050.1| Sam4p [Saccharomyces cerevisiae S288c]
gi|74583784|sp|Q08985.1|SAM4_YEAST RecName: Full=Homocysteine S-methyltransferase 2; AltName:
Full=S-adenosylmethionine metabolism protein 4; AltName:
Full=S-methylmethionine:homocysteine methyltransferase
2; Short=SMM:Hcy S-methyltransferase 2
gi|1370563|emb|CAA98009.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407693|gb|EDV10958.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
RM11-1a]
gi|190408547|gb|EDV11812.1| homocysteine S-methyltransferase 2 [Saccharomyces cerevisiae
RM11-1a]
gi|256270978|gb|EEU06101.1| Sam4p [Saccharomyces cerevisiae JAY291]
gi|259149884|emb|CAY86687.1| Sam4p [Saccharomyces cerevisiae EC1118]
gi|285815271|tpg|DAA11163.1| TPA: Sam4p [Saccharomyces cerevisiae S288c]
gi|323331098|gb|EGA72516.1| Sam4p [Saccharomyces cerevisiae AWRI796]
Length = 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV ++
Sbjct: 191 ILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDIL 249
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + +P N+ L
Sbjct: 250 ESLH-------------------QALP-----------------------------NMAL 261
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 262 LAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 313
>gi|392295944|gb|EIW07047.1| Sam4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV ++
Sbjct: 191 ILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDIL 249
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + +P N+ L
Sbjct: 250 ESLH-------------------QALP-----------------------------NMAL 261
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 262 LAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 313
>gi|399156475|ref|ZP_10756542.1| homocysteine S-methyltransferase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 304
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 149/404 (36%), Gaps = 129/404 (31%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++ L++GG ++ + + HPLWS + D V + HRDFI +GA ++ N+
Sbjct: 1 MTDIALLEGGLGQEIQKR--SMTNAHPLWSVKVMFDQPDIVTKVHRDFIMSGARVICLNT 58
Query: 61 YQASIG-----GFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIA 115
Y A+ GF + L+ + ++ L + S +KE+ + + + +A
Sbjct: 59 YTATQTRMTRHGFGDQLETAHKTAINLARQS---LKESSVKDGS------------VQVA 103
Query: 116 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDG 175
G + P AS YV VS+ Y SL
Sbjct: 104 GILPPLVAS----------YVAEVSK-------------------------DYNNSL--- 125
Query: 176 SEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235
EYR ++ AL + G D+ IET+ EA+ ++E ++
Sbjct: 126 DEYR------------------QLVALQKDGVDLFLIETMSNIDEARAALTAVKE-ANKP 166
Query: 236 AWLSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTEN 293
A++S + DD + +GE N NP+ ++ +NC P ++ + + N
Sbjct: 167 AFVSLTIADDLSNKLRSGEDLRVAIDVLSNENPNGIM---LNCSSPEAITKAMSIMTELN 223
Query: 294 IPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSG 353
IP + G I PL + G
Sbjct: 224 IP---FGGLGNGFTTIS----------------------------------PL----SPG 242
Query: 354 ERYDAVNARWIDRDLCEPV-DKYVTDWLDEGVALVGGCCRTYAE 396
D ++AR +DL V ++ W++ G ++GGCC E
Sbjct: 243 STVDKLSAR---KDLSPKVYAEFACQWVEAGATIIGGCCEIGPE 283
>gi|151942529|gb|EDN60875.1| AdoMet-homocysteine methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|349581549|dbj|GAA26706.1| K7_Sam4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV ++
Sbjct: 191 VLSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDIL 249
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + +P N+ L
Sbjct: 250 ESLH-------------------QALP-----------------------------NMAL 261
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 262 LAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 313
>gi|325293713|ref|YP_004279577.1| S-methyltransferase [Agrobacterium sp. H13-3]
gi|325061566|gb|ADY65257.1| S-methyltransferase [Agrobacterium sp. H13-3]
Length = 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +L ++ P WS+ L + D V Q H++FI+AGAD+V TNS
Sbjct: 1 MGTIRILDGGMSRELQRLGAELK--QPEWSALALINSPDIVRQVHQEFIEAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q S+ IAL AR +D RD+L+AGS
Sbjct: 59 YALVPFHIG----------EERFQKDGESL------IALSGRLAREAADASGRDVLVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|400293061|ref|ZP_10794946.1| homocysteine S-methyltransferase family protein [Actinomyces
naeslundii str. Howell 279]
gi|399901767|gb|EJN84637.1| homocysteine S-methyltransferase family protein [Actinomyces
naeslundii str. Howell 279]
Length = 156
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 55/201 (27%)
Query: 206 GADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKDD-KHISNGESFTQVARTCYN 263
G D+ A+ET+P EAQ L +++ P + W+SF + D +++G + A
Sbjct: 4 GVDLFALETLPRLDEAQALLAMVKVLAPQAECWISFQVRSDGTRLADGTPLAEAAAW--A 61
Query: 264 MNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLC 322
++AVG+NCV P +V + L+T + PLV YPN+GE
Sbjct: 62 AQEGMVVAVGINCVAPDVVGRALPVLRTATDKPLVAYPNAGE------------------ 103
Query: 323 RLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE 382
L + P ++W S +GE V + + W+
Sbjct: 104 --LYD-PVTESWRS---------------AGEEGGLV--------------ELASSWIAA 131
Query: 383 GVALVGGCCRTYAEDTLHMKH 403
G LVGGCCRT + H
Sbjct: 132 GARLVGGCCRTRPAQIRELAH 152
Score = 42.4 bits (98), Expect = 0.62, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 535 LIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNSGERYD 573
++AVG+NCV P +V + L+T + PLV YPN+GE YD
Sbjct: 67 VVAVGINCVAPDVVGRALPVLRTATDKPLVAYPNAGELYD 106
>gi|410084361|ref|XP_003959757.1| hypothetical protein KAFR_0L00150 [Kazachstania africana CBS 2517]
gi|372466350|emb|CCF60622.1| hypothetical protein KAFR_0L00150 [Kazachstania africana CBS 2517]
Length = 326
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 150/407 (36%), Gaps = 131/407 (32%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSY-FLA-------TAKDA--VVQTHRDFIKAGADIVM 57
DGG +L DI H LWS+ FL+ ++ D V DF+ AGA+I+M
Sbjct: 21 DGGQGLELERRGLDI--KHRLWSTRPFLSKSFWSDPSSNDIRIVKGMFEDFVNAGAEILM 78
Query: 58 TNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
T +YQ S V E+ L+
Sbjct: 79 TTTYQTSFKA----------------------VSESTELK-------------------- 96
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSE 177
SLR+ +E D + + A + + LI GS+G YGA + G E
Sbjct: 97 ------SLREYNELL-DKIVGFTRACIGDNRYLI-----------GSIGSYGALV--GGE 136
Query: 178 YRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLREWPHQKA 236
Y GDY + + +P++ + DI+ ETI E + L + +
Sbjct: 137 YSGDYGDSPETVDFYSYFKPQLDNFLNNDEIDIVGFETIANFTELKSLLSWDEKKVSKPF 196
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLIEQLKT- 291
++S S D+ ++ +G + ++ NP+ L +GVNCV + +I+ +
Sbjct: 197 YISLSVHDNGNLRDGTPMHLITDYIKSLATAINPN-LTFLGVNCVNYNKATEIIDSIHNG 255
Query: 292 -ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYP 350
+PL V+PNSGE + +E + W T N P
Sbjct: 256 LPTMPLSVFPNSGE-VFNVE--------------------KGIW------TAN------P 282
Query: 351 NSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ ++AV R+I GV +VGGCCRT D
Sbjct: 283 EAAASWEAVVKRFI----------------SSGVRIVGGCCRTRPHD 313
>gi|149391047|gb|ABR25541.1| homocysteine s-methyltransferase 3 [Oryza sativa Indica Group]
Length = 119
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 340 KTENIPLVVYPNSGERYDAVNARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRT 393
K + P+++YPNSGERYDA W++ D YV +W +G L+GGCCRT
Sbjct: 40 KVTDKPILIYPNSGERYDAEKKEWVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRT 95
Score = 43.5 bits (101), Expect = 0.28, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 537 AVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
AVG+NC P + LI + K + P+++YPNSGERYD
Sbjct: 20 AVGINCTPPRFIHGLILSIRKVTDKPILIYPNSGERYD 57
>gi|298245193|ref|ZP_06968999.1| homocysteine S-methyltransferase [Ktedonobacter racemifer DSM
44963]
gi|297552674|gb|EFH86539.1| homocysteine S-methyltransferase [Ktedonobacter racemifer DSM
44963]
Length = 641
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 117/307 (38%), Gaps = 64/307 (20%)
Query: 142 ATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQA 201
A +A R +++ P I +AG++GP G+ L GD + E + A
Sbjct: 92 AKIAREARELSEQP---IFLAGNIGPLGSHLAP----LGDITPEEARNAFQE----QAAA 140
Query: 202 LVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTC 261
L+E+G D+L IETI +E + +R S ++ +S+GE VA+T
Sbjct: 141 LLESGVDLLIIETITNLEEMREALSAIRGMTDLPIVALMSFDEENTVSSGEEPLLVAQTM 200
Query: 262 YNMNPDQLIAVGVNC-VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQM 320
+ D VGVNC + P S+IE + T GEH
Sbjct: 201 QELGAD---VVGVNCALGPAGTFSVIEGMST-----------GEH--------------- 231
Query: 321 LCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380
E+ L PN+G V R+I + Y +L
Sbjct: 232 ---------------------EHFLLAAQPNAG-LPKRVGNRFIYGASPDYFADYARRFL 269
Query: 381 DEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAV-V 439
+ GV+L+GGCC T + M+ L ++ L T + P + F + +
Sbjct: 270 EIGVSLLGGCCGTTPQHIAAMRKVLAEYAPELGTREITVPKRQPRLETIFERDPESSSGT 329
Query: 440 QTHRDFI 446
QTH ++
Sbjct: 330 QTHSTYL 336
>gi|323307617|gb|EGA60884.1| Sam4p [Saccharomyces cerevisiae FostersO]
Length = 261
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 113/291 (38%), Gaps = 65/291 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 9 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 68
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 69 I--CCEFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 126
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD---QLIAVGVNCVRPLMVSSLIE 287
+ ++ S + + +G + ++A+ ++ +G+NCV ++E
Sbjct: 127 ILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINHNFSFLGINCVSFNQSPDILE 186
Query: 288 QLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLV 347
L + +P N+ L+
Sbjct: 187 SLH-------------------QALP-----------------------------NMALL 198
Query: 348 VYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 199 AYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 249
>gi|389741687|gb|EIM82875.1| Homocysteine S-methyltransferase [Stereum hirsutum FP-91666 SS1]
Length = 395
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 166/423 (39%), Gaps = 93/423 (21%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG + L I PLWS+ + + +V+ H F++AGA I++T++YQ +
Sbjct: 17 VLDGGLGTTLEDVFHKDIS-TPLWSARHIDKEPEVLVEAHLAFLRAGARIILTSTYQCT- 74
Query: 66 GGFMEFLDLDYDSS--YQLIKSSVDYVKEAIALEATHARIRSDDPA---RDILIAGSVGP 120
+ F Y + +L + +V +A EA + D A D+ +A S+GP
Sbjct: 75 --YETFAAAGYSRAEGERLTRKAVH-----LASEARKRFVEESDGAVKIGDVKVALSMGP 127
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
YG + G EY G Y + P + A S+ +++
Sbjct: 128 YGVTCSPGQEYGGFYPPPFGPQAYS------ASGPNTNAFAAADQTKRSMSIDALTDF-- 179
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQML---CRLLR-------- 229
H+ + H + + E D++A ETIP ++E + + RLL+
Sbjct: 180 ----HLQRLRI---HSNDLDSWKE--IDLVAFETIPLAREIKAIRGAMRLLQIELEPRPA 230
Query: 230 --EWPHQKAWLSFSCKDDK--HISN-GESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSS 284
EW + W+S D + H S G+ V + + ++ P M S
Sbjct: 231 GFEW--KPWWISTVWPDGRFPHESGPGKRRLSVKEVVFTLLHEE----------PKMASQ 278
Query: 285 LIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
I+ + + + + S H+ + T +++ L R+ Q W
Sbjct: 279 SIDHYEVQPDGIGINCTSMAHLQDVLT----GMEEVVGDLWRK--KQGPW---------- 322
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE--------------GVALVGGC 390
LV+YPN GE YD V+ W + + + T W + G +VGGC
Sbjct: 323 -LVLYPNGGEEYDPVSRTWSGK---KEGTEGGTGWAENLAALASAAMSKRLWGGVVVGGC 378
Query: 391 CRT 393
C+T
Sbjct: 379 CKT 381
>gi|338995679|ref|ZP_08635392.1| homocysteine methyltransferase, partial [Halomonas sp. TD01]
gi|338766535|gb|EGP21454.1| homocysteine methyltransferase [Halomonas sp. TD01]
Length = 123
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDG +++L T D+ D LWS+ LA A + + Q H+ + +AGAD +T SYQA++
Sbjct: 18 VIDGAMATELETLGCDLNDA--LWSARLLAQAPEKIRQVHQAYFEAGADCAITASYQATV 75
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA 93
GFM+ L + +LI+ SV ++A
Sbjct: 76 PGFMQ-AGLTAQEARELIQLSVTLAQQA 102
>gi|365758864|gb|EHN00688.1| Sam4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 73/295 (24%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+T D +RD + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIKTLSEYNNLLTRIVDFSRDCIGENKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFETIPNVHELRAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVR----PLMV 282
+ ++ S + + +G + +VA+ + NP+ +G+NCV P ++
Sbjct: 191 ILSKPFYIGLSVHEHGVLRDGTTVEEVAKVIKGLGDKINPN-FSLLGINCVSFNQSPDIL 249
Query: 283 SSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
SL + L N+ L+ YPNSGE + E +K WL
Sbjct: 250 ESLHQALP--NMALLAYPNSGE-VYDTE--------------------KKIWL------- 279
Query: 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
PNS D +N+ W D V ++ G ++GGCCRT D
Sbjct: 280 -------PNS----DKLNS-W---------DTVVKQYIGSGARIIGGCCRTSPND 313
>gi|335034356|ref|ZP_08527706.1| S-methyltransferase [Agrobacterium sp. ATCC 31749]
gi|333794225|gb|EGL65572.1| S-methyltransferase [Agrobacterium sp. ATCC 31749]
Length = 304
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +L ++ P WS+ L A D V Q H +FI+AGAD+V TNS
Sbjct: 1 MGTIRILDGGMSRELQRLGAEL--KQPEWSALALINAPDIVRQVHAEFIEAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q +S+ IAL AR +D R +L+AGS
Sbjct: 59 YALVPFHIG----------EERFQKDGASL------IALSGQLAREAADASGRKVLVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|401841116|gb|EJT43639.1| hypothetical protein SKUD_132402 [Saccharomyces kudriavzevii IFO
1802]
Length = 261
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 69/293 (23%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPAR-----DILIAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+T D +R D + G +GP+GA
Sbjct: 9 GAEILMTTTYQTSYKSVSENTPIKTLSEYNNLLTRIVDFSRVCIGEDKYLIGCIGPWGAH 68
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P++ ++ D++ ETIP E + +
Sbjct: 69 I--CCEFTGDYGPDPQSIDFYKYFKPQLDNFNKSDKLDLIGFETIPNVHELRAILSWDES 126
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + +VA+ + NP+ +G+NCV ++
Sbjct: 127 ILSKPFYIGLSVHEHGVLRDGTTMEEVAKVIKGLGDKINPN-FSLLGINCVSFNQSPDIL 185
Query: 287 EQLKT--ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
E L N+ L+ YPNSGE +T +K WL
Sbjct: 186 ESLHQVLPNMALLAYPNSGE---VYDT------------------EKKIWL--------- 215
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
PNS D +N+ W D V ++ G ++GGCCRT D
Sbjct: 216 -----PNS----DKLNS-W---------DAVVKQYIGSGARIIGGCCRTSPND 249
>gi|418300318|ref|ZP_12912144.1| S-methyltransferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355533731|gb|EHH03051.1| S-methyltransferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 303
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ ++++DGG S +L +G ++ P WS+ L A + V Q H++FI+AGAD+V TNS
Sbjct: 1 MSTIRILDGGMSRELQ-RLGAVLK-QPEWSALALIDAPEIVRQVHQEFIEAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q +S+ IAL AR +D R +L+AGS
Sbjct: 59 YALVPFHIG----------EERFQKDGASL------IALSGKLAREAADASGRKVLVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|145251449|ref|XP_001397238.1| homocysteine S-methyltransferase [Aspergillus niger CBS 513.88]
gi|134082772|emb|CAK48546.1| unnamed protein product [Aspergillus niger]
gi|350636548|gb|EHA24908.1| hypothetical protein ASPNIDRAFT_210376 [Aspergillus niger ATCC
1015]
Length = 353
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGH--PLWSSYFLATAKDAVVQTHRDFIKAGA-DIVMTNS 60
+ ++DGG + L + PLWSS+ + + ++ RDF A D+++T +
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSSTTPLWSSHLMISDPSTLLSCQRDFTTTAAVDVLLTAT 65
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
YQ S GF + + +S Y++ A+ + + S +A S+GP
Sbjct: 66 YQVSPEGFQRTKTPSHPTGIPR-ESIAGYLRTALDVAGQAVQNTSAS------VALSLGP 118
Query: 121 YGASLRDGSEYRGDY-VEHVSEATMAEWH 148
YGA + G EY G Y EH +E + WH
Sbjct: 119 YGACMIPGQEYSGKYDGEHDTEEKLWRWH 147
>gi|358375623|dbj|GAA92203.1| homocysteine S-methyltransferase [Aspergillus kawachii IFO 4308]
Length = 354
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 4 VKLIDGGFSSQLSTYVGDII--DGHPLWSSYFLATAKDAVVQTHRDFIKAGA-DIVMTNS 60
+ ++DGG + L + D PLWSS+ + + ++ RDF A D+++T +
Sbjct: 6 ILILDGGLGTSLQDHYNITFSSDTTPLWSSHLMISDPKTLLSCQRDFTTTAAVDVLLTAT 65
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSV-DYVKEAIALEATHARIRSDDPARDILIAGSVG 119
YQ S GF + S + ++S+ Y++ A+ + + S +A S+G
Sbjct: 66 YQVSPEGFQRTKTPSHPSG--IPRASIAGYLRTALDVAEQAVQDTSAS------VALSLG 117
Query: 120 PYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
PYGA + G EY G Y EH E + WH
Sbjct: 118 PYGACMIPGQEYSGKYDGEHDDEEKLWRWH 147
>gi|410447527|ref|ZP_11301622.1| homocysteine S-methyltransferase [SAR86 cluster bacterium SAR86E]
gi|409979538|gb|EKO36297.1| homocysteine S-methyltransferase [SAR86 cluster bacterium SAR86E]
Length = 306
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 151/398 (37%), Gaps = 118/398 (29%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIID-GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTN 59
++++ ++D G S+L D+ D + +WS+ + D +V+ H+D I+AG+ ++ T+
Sbjct: 9 LSDLYILDCGLGSELKRKGFDLPDWTNSIWSAQAIIDEPDLIVEIHKDSIEAGSTVITTS 68
Query: 60 SYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
+Y A+ + D S + DY KE + T A +DI+IAG
Sbjct: 69 NYYAT-----PLILKDKQSKF-------DY-KELSEIALTLAERAVKQSGKDIMIAGCFP 115
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
P S +R D + SE
Sbjct: 116 PINVS------FRPDLTPNKSE-------------------------------------- 131
Query: 180 GDYVEHVSEATMAEWHRPRIQA-LVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWL 238
VE E T+AE ++ R+ A L E A I E I A +Q +K WL
Sbjct: 132 ---VESFYE-TLAEIYKGRVDAILCETMASIFEGE-IAADVASQHF---------KKVWL 177
Query: 239 SFSCK--DDKHISNGESFTQVARTCYNMNPD-QLIAVGVNCVRPLMVSSLIEQLKTENIP 295
S++ + + I +GE Q A++ N D QLI NC +++ +E LK+
Sbjct: 178 SWNTRGLNPSLIPSGEELIQAAKSVSKFNLDCQLI----NCAHADLITESLEILKSVASN 233
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
+ VY NS H S+E Q+ ENI V Y + E
Sbjct: 234 IGVYANSSIH--------TSREKQLE------------------SYENISEVHYHHQTE- 266
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
I D ++ W+ G +VGGCC T
Sbjct: 267 --------ISSD---EYAEFAKKWIAMGCKIVGGCCTT 293
>gi|393234786|gb|EJD42346.1| Homocysteine S-methyltransferase, partial [Auricularia delicata
TFB-10046 SS5]
Length = 411
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 46/218 (21%)
Query: 24 DGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLI 83
DG LW++ + A D VV+ HR F+ AGA I+ T++YQ + + D + Q++
Sbjct: 9 DGSALWAAACVQNAPDKVVEVHRRFLTAGARIIETSTYQVARATGVR-AGFDGQQTEQIM 67
Query: 84 KSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEAT 143
S+V EA S DP RD + P GA VS A+
Sbjct: 68 CSAVKLADEARKAFYESGEALSTDP-RD---SRGASPSGA---------------VSSAS 108
Query: 144 MAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSE--------ATMAEWH 195
+ +A S+GPYGA+L E+ G Y +A WH
Sbjct: 109 A-------------QVEVALSLGPYGATLVPSCEFSGVYPPPFGPPAEEAAAEDALASWH 155
Query: 196 RPRIQAL-----VEAGADILAIETIPASKEAQMLCRLL 228
R++ V A +ILA ETIP +E + + R +
Sbjct: 156 LQRLRVYARHDDVWAKINILAFETIPLLREIRAVRRAM 193
>gi|385810397|ref|YP_005846793.1| methionine synthase I methyltransferase subunit [Ignavibacterium
album JCM 16511]
gi|383802445|gb|AFH49525.1| Methionine synthase I methyltransferase subunit [Ignavibacterium
album JCM 16511]
Length = 297
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 68/298 (22%)
Query: 117 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGS 176
S +G S S Y D + AE R + A D L+ GSVGP G L G
Sbjct: 62 STNSFGGSSIKLSHYNLDNKTYELNKIAAEISR----EAAGDKLVMGSVGPTGKFLMTG- 116
Query: 177 EYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA 236
+S + E + +AL++ G D + +ET EA+ + ++++P
Sbjct: 117 --------DISSEELIESFTLQTKALLDGGVDAILLETFYDIDEAECAIKAVKDFPDVPL 168
Query: 237 WLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI----AVGVNCVRPLMVSSLIEQLKTE 292
SF+ D++ S+GE T + T ++ + +GVNC +S+I+
Sbjct: 169 ICSFTY--DRN-SSGEYRTMMGSTPKDVLQAMITLGVDVIGVNCGSGY--NSMID----- 218
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
L + LR + + NIPL+V PN+
Sbjct: 219 ----------------------------LVKELRGF------------SHNIPLLVQPNA 238
Query: 353 GERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVS 410
G + + + + + E + V +L G+ ++GGCC T E ++ +D+++S
Sbjct: 239 G-LPETIESNIVYSETSEAIINSVKSFLSIGINIIGGCCGTTPEHIKIIRKTVDEFLS 295
>gi|365758151|gb|EHN00009.1| Sam4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 325
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 73/295 (24%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+T D +RD + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIKTLSEYNNLLTRIVDFSRDCIGENKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGPDPESIDFYKYFKPQLDNFNKNDKLDLIGFETIPNVHELRAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVR----PLMV 282
+ ++ S + + +G + +VA+ + NP+ +G+NCV P ++
Sbjct: 191 ILSKPFYIGLSVHEHGVLRDGTTMEEVAKVIKGLGDKINPN-FSLLGINCVSFNQSPDIL 249
Query: 283 SSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTE 342
SL + L ++ L+ YPNSGE + E +K WL
Sbjct: 250 ESLHQALP--DMALLAYPNSGE-VYDTE--------------------KKIWL------- 279
Query: 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
PNS D +N+ W D V ++ G ++GGCCRT D
Sbjct: 280 -------PNS----DKLNS-W---------DTVVKQYIGSGARIIGGCCRTSPND 313
>gi|320587427|gb|EFW99907.1| homocysteine s-methyltransferase [Grosmannia clavigera kw1407]
Length = 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 1 MAN--VKLIDGGFSSQLSTYVGDIID--GHPLWSSYFLATAKDAVVQT-----HRDFIKA 51
MAN ++++DGG + L G PLWSS+ LAT + +T DF +A
Sbjct: 1 MANCPIRILDGGLGTSLQDRYGVEFSSAATPLWSSHLLATGPQSEPETLLQRCQADFCRA 60
Query: 52 GADIVMTNSYQASIGGFMEFLDL--------DYDSSYQLIKSSVDYVKEAIALEATHARI 103
GAD++ T +YQ S G L + YQ ++ +V + A +E T A+
Sbjct: 61 GADVLETATYQISTAGLARTRVLPDHPDGIVEPADVYQFLERAVAVAEAAGNVE-TEAKT 119
Query: 104 RSDDPARDILIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWH 148
+ A I + S+GPYGA + +EY G Y + + + WH
Sbjct: 120 TKHETAPSIAL--SLGPYGACMIPSTEYSGAYDFDGRNTTALRRWH 163
>gi|222106142|ref|YP_002546933.1| S-methyltransferase [Agrobacterium vitis S4]
gi|221737321|gb|ACM38217.1| S-methyltransferase [Agrobacterium vitis S4]
Length = 301
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M V+++DGG S +L ++ P WS+ L A D V Q H +FI AGAD+V TNS
Sbjct: 1 MTKVRILDGGMSRELLRLGAEL--KQPEWSALALINAPDIVRQVHAEFIAAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q S+ IAL AR +D R +L+AGS
Sbjct: 59 YALVPFHIG----------EERFQSEGPSL------IALSGELARQAADASGRKVLVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|260432347|ref|ZP_05786318.1| homocysteine S-methyltransferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416175|gb|EEX09434.1| homocysteine S-methyltransferase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 143/414 (34%), Gaps = 133/414 (32%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++ L+DG +L GD PLWS+ + D V + H D+ + GA I TN+
Sbjct: 1 MTDITLMDGSIGQELVKRSGD--RATPLWSTRVMIDHPDLVGEVHADYFRRGATIATTNT 58
Query: 61 YQ------ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
Y A +G ME D LI +++ A R R+ P I
Sbjct: 59 YAVHRSRLARVG--ME------DQLPALIDTAL----------AQAERARAQFPQGR--I 98
Query: 115 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
AG++GP AS YR D +EA
Sbjct: 99 AGALGPLLAS------YRPDLSPDPTEA-------------------------------- 120
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234
AE R +Q + + D+ IET+ + +EA+ R + +
Sbjct: 121 -----------------AEKFRELVQMMADR-VDLFLIETVSSVQEAEGALRGTQGC-GK 161
Query: 235 KAWLSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292
AWL+ + DD + +GE+ +A P+ AV +NC RP + + + +K
Sbjct: 162 PAWLALTVMDDDGTRLRSGEALGDIAPLVDRFGPE---AVLINCSRPEAIPAALGIIKGL 218
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
P Y N F+C +E +
Sbjct: 219 GRPFGAYAN----------------------------------GFTCISEG-----FLQD 239
Query: 353 GERYDAVNARWIDRDLC-EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
DA+ R +DL + + W+ +G +VGGCC + + RL
Sbjct: 240 APTVDALEQR---QDLGPDAYADHAMGWVAQGATIVGGCCEVGPDHIEALAGRL 290
>gi|119473799|ref|XP_001258775.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
gi|119406928|gb|EAW16878.1| homocysteine S-methyltransferase, putative [Neosartorya fischeri
NRRL 181]
Length = 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPAS 218
++I+G++GP LRD E D E ++ E +R +++ L +AG D+LAI T+
Sbjct: 117 VVISGTMGP----LRDAYE---DTSESITLEDAREGYREQVEVLADAGVDMLAIMTVTNL 169
Query: 219 KEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 278
EA + L +E +SFS + D + G S RT ++ GVNC
Sbjct: 170 NEAIAVVELAKEV-RLPVVVSFSIESDGRLLGGRSLESAIRTVDEKTGGYVVYYGVNCAH 228
Query: 279 PLMVSSLIEQL 289
P+ +S+ + +
Sbjct: 229 PVRISAALRDV 239
>gi|159185173|ref|NP_355317.2| S-methyltransferase [Agrobacterium fabrum str. C58]
gi|159140442|gb|AAK88102.2| S-methyltransferase [Agrobacterium fabrum str. C58]
Length = 304
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +L ++ P WS+ L A D V Q H +FI+AGAD+V TNS
Sbjct: 1 MGTIRILDGGMSRELQRLGAEL--KQPEWSALALINAPDIVRQVHAEFIEAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q +S+ IAL AR +D R + +AGS
Sbjct: 59 YALVPFHIG----------EERFQKDGASL------IALSGQLAREAADASGRKVQVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|328857595|gb|EGG06711.1| hypothetical protein MELLADRAFT_26682 [Melampsora larici-populina
98AG31]
Length = 358
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 26/147 (17%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG + L+ G+ +D LWS+ L + + + H+ + KAGADI+ + SYQA++
Sbjct: 3 LLDGGNGTTLADDPGNELDTG-LWSATLLVKHPEKIARLHQSWEKAGADIITSCSYQATV 61
Query: 66 GGFMEFL----------------DLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDP 108
GF +L + D ++++ + S +D+++ +I + H + +
Sbjct: 62 QGFENYLLKQTHTEQNDVEKPSKEADENATHLPRLNSPLDFLRSSIGV--AHKSLSTAK- 118
Query: 109 ARDILIAGSVGPYGASLRDGSEYRGDY 135
+ S+GP+GA+L +Y G Y
Sbjct: 119 -----VGLSLGPFGATLTPPQDYAGIY 140
>gi|359148093|ref|ZP_09181329.1| homocysteine methyltransferase, partial [Streptomyces sp. S4]
Length = 117
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 7 IDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIG 66
+DGG S QL+ D+ D LWS+ LA A + VV HR + AGA++ +T SYQA+
Sbjct: 22 VDGGLSEQLAAQGNDLSDA--LWSARLLADAPEEVVAAHRAYYAAGAEVAITASYQATFE 79
Query: 67 GF 68
GF
Sbjct: 80 GF 81
>gi|374106024|gb|AEY94934.1| FABL125Wp [Ashbya gossypii FDAG1]
Length = 336
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 123/317 (38%), Gaps = 81/317 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
V ++DGG ++L I+ P+WS+ FL A + V RDF+ AGA
Sbjct: 17 VLVMDGGQGTELENR--GIVVASPVWSAAPFLDAAAWQQPDSRERAIVASVLRDFVAAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+++MT +YQAS + Y L+ V + +E + D
Sbjct: 75 EVIMTITYQASFTSVTTNTGITTLQDYNALLDRIVGFCRETV--------------GDDK 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ GS+G +GA + +E+ GDY GP
Sbjct: 121 YLVGSIGAWGAHV--CAEFTGDY------------------------------GP----- 143
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLREW 231
R D++++++ + +P++ + D++ ETIP + E + +
Sbjct: 144 ------RPDHIDYLA------YFKPQLDNFNAQPALDLIGFETIPNAHELRAILSWDESV 191
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSSLIEQL 289
+ +++ S D + +G VA P + +G+NC +++ +L
Sbjct: 192 IAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGINCSSLSRTPAILAEL 251
Query: 290 KT--ENIPLVVYPNSGE 304
+P+ +YPNSGE
Sbjct: 252 HALLPALPMTIYPNSGE 268
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 87/243 (35%), Gaps = 53/243 (21%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIP 216
D + GS+G +GA + +E+ GDY + +P++ + D++ ETIP
Sbjct: 119 DKYLVGSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFETIP 176
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGV 274
+ E + + + +++ S D + +G VA P + +G+
Sbjct: 177 NAHELRAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGI 236
Query: 275 NCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
NC SSL S+ +L L P
Sbjct: 237 NC------SSL-----------------------------SRTPAILAELHALLPA---- 257
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTY 394
+P+ +YPNSGE YD V W V ++ G ++GGCCRT
Sbjct: 258 ---------LPMTIYPNSGEIYDPVKKVWNASPHVVDWGAVVASYIRSGARIIGGCCRTT 308
Query: 395 AED 397
D
Sbjct: 309 PND 311
>gi|163746420|ref|ZP_02153778.1| methionine synthase I [Oceanibulbus indolifex HEL-45]
gi|161380305|gb|EDQ04716.1| methionine synthase I [Oceanibulbus indolifex HEL-45]
Length = 337
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 114/307 (37%), Gaps = 65/307 (21%)
Query: 107 DPARDILIAGSVGPYGASLR-DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSV 165
D D+ + S G + L+ G+E R + V+ AE R + D R +++AGSV
Sbjct: 56 DSGSDLFLTNSFGANASRLKLHGAEKRVHELSRVA----AELAREVADTAERKVIVAGSV 111
Query: 166 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLC 225
GP G + + V +S + E L GADI +ETI A +E
Sbjct: 112 GPTGEIM--------EPVGTLSHSLAVEMFHETADGLKAGGADIGWLETISAPEE----- 158
Query: 226 RLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSL 285
++ A F+ D SF RT + + ++ MV L
Sbjct: 159 -------YRAAAEGFALADLPWCGT-MSFDTAGRTMMGLTSEGMVD---------MVHGL 201
Query: 286 IEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIP 345
+N PL N G A L R + L F+ K +P
Sbjct: 202 ------DNTPLAYGANCG------------TGASDLLRTV---------LGFAAKNGTLP 234
Query: 346 LVVYPNSG-ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
++ N+G +Y V E + +Y T D G +++GGCC T E + M+
Sbjct: 235 IISKGNAGIPKY--VEGHIHYDGTPELMARYATMARDAGASIIGGCCGTLPEHLVAMRDA 292
Query: 405 LDDWVSG 411
LD G
Sbjct: 293 LDSTEKG 299
>gi|45185105|ref|NP_982822.1| ABL125Wp [Ashbya gossypii ATCC 10895]
gi|44980741|gb|AAS50646.1| ABL125Wp [Ashbya gossypii ATCC 10895]
Length = 336
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 123/317 (38%), Gaps = 81/317 (25%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
V ++DGG ++L I+ P+WS+ FL A + V RDF+ AGA
Sbjct: 17 VLVMDGGQGTELENR--GIVVASPVWSAAPFLDAAAWQQPDSRERAIVASVLRDFVAAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+++MT +YQAS + Y L+ V + +E + D
Sbjct: 75 EVIMTITYQASFTSVTTNTGITTLQDYNALLDRIVGFCRETV--------------GDDK 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ GS+G +GA + +E+ GDY GP
Sbjct: 121 YLVGSIGAWGAHV--CAEFTGDY------------------------------GP----- 143
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIPASKEAQMLCRLLREW 231
R D++++++ + +P++ + D++ ETIP + E + +
Sbjct: 144 ------RPDHIDYLA------YFKPQLDNFNAQPALDLIGFETIPNAHELRAILSWDESV 191
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGVNCVRPLMVSSLIEQL 289
+ +++ S D + +G VA P + +G+NC +++ +L
Sbjct: 192 IAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGINCSSLSRTPAILAEL 251
Query: 290 KT--ENIPLVVYPNSGE 304
+P+ +YPNSGE
Sbjct: 252 HALLPALPMTIYPNSGE 268
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 87/243 (35%), Gaps = 53/243 (21%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQAL-VEAGADILAIETIP 216
D + GS+G +GA + +E+ GDY + +P++ + D++ ETIP
Sbjct: 119 DKYLVGSIGAWGAHV--CAEFTGDYGPRPDHIDYLAYFKPQLDNFNAQPALDLIGFETIP 176
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP--DQLIAVGV 274
+ E + + + +++ S D + +G VA P + +G+
Sbjct: 177 NAHELRAILSWDESVIAKPFYVALSVHDAGTLRDGTPMADVAAIVAAAAPLNPNFLGLGI 236
Query: 275 NCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
NC SSL S+ +L L P
Sbjct: 237 NC------SSL-----------------------------SRTPAILAELHALLPA---- 257
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTY 394
+P+ +YPNSGE YD V W V ++ G ++GGCCRT
Sbjct: 258 ---------LPMTIYPNSGEIYDPVKKVWNASPHVVDWGAVVASYIRSGARIIGGCCRTI 308
Query: 395 AED 397
D
Sbjct: 309 PND 311
>gi|326795355|ref|YP_004313175.1| homocysteine S-methyltransferase [Marinomonas mediterranea MMB-1]
gi|326546119|gb|ADZ91339.1| homocysteine S-methyltransferase [Marinomonas mediterranea MMB-1]
Length = 303
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+V ++DGG +L+ P WS+ + A + V + H DFI++GA ++ TNSY
Sbjct: 5 SVTILDGGMGRELNRRNAPF--QQPEWSALAMMQAPEIVKEVHHDFIESGARVIATNSY- 61
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
S+ F ++ + Y L + S + ++A A E+ H ++L+AGS+ P
Sbjct: 62 -SLVPFHIGEEVFAEQGYSLAELSGEVARQAAA-ESKH----------NVLVAGSLPPLF 109
Query: 123 ASLRDGSEYRGDYVEHVS 140
S R +R D VE V+
Sbjct: 110 GSYR-ADLFRADRVEEVA 126
>gi|443700440|gb|ELT99394.1| hypothetical protein CAPTEDRAFT_129091, partial [Capitella
teleta]
Length = 91
Score = 55.8 bits (133), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 25 GHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIK 84
G PLWSS +++ A+ + H F+++G+D++ + +YQAS+ GFM+ L L S L++
Sbjct: 1 GDPLWSSRLISSNPSAIQKVHESFLESGSDVIESATYQASVSGFMQHLGLSEKDSIDLMR 60
>gi|159900149|ref|YP_001546396.1| bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase [Herpetosiphon aurantiacus DSM 785]
gi|159893188|gb|ABX06268.1| homocysteine S-methyltransferase [Herpetosiphon aurantiacus DSM
785]
Length = 617
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 140/406 (34%), Gaps = 128/406 (31%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L DG +QL G ID + + L T D V + H+ +I+AGADI+ TN+Y A+
Sbjct: 15 LCDGAMGTQL---YGRGIDFDECFDALNL-TQPDVVREIHQSYIEAGADIIETNTYGANR 70
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
F D Q+ + +EA + T + LIAG+VGP G L
Sbjct: 71 FKLEPF--GLADKVRQINHRGMKLAREAREIAGT-----------NTLIAGAVGPLGVLL 117
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ PYG
Sbjct: 118 Q----------------------------------------PYGP--------------- 122
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
++E E +I L+E GAD+L ET +E + + ++ + +D
Sbjct: 123 LTEQAAHEAFAEQIGTLLEQGADLLMFETFSDLREMLIAVKAAKQVGDLPIVAQMTFAED 182
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQLKTEN--IPLVVYPNS 302
G + +V R + + VGVNC V V +++ ++ N IP+ PN+
Sbjct: 183 GRTVLGNTPEEVVRKLVELG---VAVVGVNCSVGSQRVFRVVQSMRAVNPTIPISAQPNA 239
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G WP TE V YP+S E Y A AR
Sbjct: 240 G------------------------WP-----------TERHNRVFYPSSPE-YMADYAR 263
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
+ +L V +VGGCC T + +M L D
Sbjct: 264 RMVEEL--------------NVQIVGGCCGTTPQHISNMHSALQDL 295
>gi|126730412|ref|ZP_01746223.1| homocysteine S-methyltransferase family protein [Sagittula stellata
E-37]
gi|126709145|gb|EBA08200.1| homocysteine S-methyltransferase family protein [Sagittula stellata
E-37]
Length = 296
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 139/411 (33%), Gaps = 132/411 (32%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
V L+DGG +L GD PLWS+ + V + H D+ AGA + NSY
Sbjct: 2 KVTLLDGGMGQELIHRAGD--RPTPLWSTQVMIDRPGLVQEIHADYFAAGATVATANSYA 59
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
D + IK + + EA EAT AR D IAGS P G
Sbjct: 60 V-------LRDRLIPAG---IKDRYEELVEAAMAEATQAR----DAFGGGKIAGSTAPLG 105
Query: 123 ASLRDGSEYRGDYVEHVSEAT--MAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
A+ YR D + EA AE RL+
Sbjct: 106 AT------YRTDKHPDLHEAIPLYAEKARLMA---------------------------- 131
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA---W 237
PR AD++ IET + + CR E Q W
Sbjct: 132 ----------------PR--------ADLILIET----AASLLTCRAALEGVLQAGRPVW 163
Query: 238 LSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP 295
LS S D+ + +GE V + D AV +NC P + + ++ L ++P
Sbjct: 164 LSISVDDEDGSRLRSGEKVADV----LPIARDGAAAVLINCSAPEAMPAALDILARVDLP 219
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
+ Y N+ I +K+ L++ P
Sbjct: 220 IGAYANAFTRI--------TKD------FLKDQPT------------------------- 240
Query: 356 YDAVNARWIDRDLC-EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D++ AR RD+ E + WLD G ++GGCC T + RL
Sbjct: 241 VDSLEAR---RDMGPETYAGHAMSWLDHGATILGGCCETGPAHIAEIASRL 288
>gi|410075748|ref|XP_003955456.1| hypothetical protein KAFR_0B00210 [Kazachstania africana CBS 2517]
gi|372462039|emb|CCF56321.1| hypothetical protein KAFR_0B00210 [Kazachstania africana CBS 2517]
Length = 326
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 94/245 (38%), Gaps = 61/245 (24%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASK 219
+ G +GP+GA + +E+ GDY H + +P++ + D++ ET+P
Sbjct: 122 LIGCIGPWGAHV--CAEFNGDYGGHPENIDYYAYFKPQLDNFFQNKDLDLIGFETVPNFH 179
Query: 220 EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVN 275
E + + + ++ S ++ + +G + ++ ++ NP+ L+ +G+N
Sbjct: 180 ELKAILSWDDTILSKPFYIGLSVHENGVLRDGTTMNEIGYYIKSLGSKINPNFLL-LGIN 238
Query: 276 CVRPLMVSSLIEQLKTE--NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333
CV ++E + E ++PL+ YPNSGE
Sbjct: 239 CVSFSDSPDILESIHKELPDMPLIAYPNSGE----------------------------- 269
Query: 334 WLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPV-DKYVTDWLDEGVALVGGCCR 392
YD V W+ + + V ++ G ++GGCCR
Sbjct: 270 ---------------------IYDTVKKIWLPNHYSDITWNDVVNRYIKAGARIIGGCCR 308
Query: 393 TYAED 397
T +D
Sbjct: 309 TMPDD 313
>gi|196233429|ref|ZP_03132273.1| methionine synthase [Chthoniobacter flavus Ellin428]
gi|196222569|gb|EDY17095.1| methionine synthase [Chthoniobacter flavus Ellin428]
Length = 1287
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 132/324 (40%), Gaps = 64/324 (19%)
Query: 4 VKLIDGGFSSQLSTY---------------VGDIIDGHPLWSSYFLATAKDAVVQTHRDF 48
+ +IDG + + TY D+++ L+S A D HR F
Sbjct: 18 IAIIDGAMGTTIRTYGMKEADIRGTRFVDAKKDLLNNGDLFSLTQAAMIGD----IHRRF 73
Query: 49 IKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDP 108
++AGADI+ TN++ A+ G EF +D + K Y K DDP
Sbjct: 74 LEAGADIIETNTFSATSIGQSEFF-VDDPREHGGRKDPAFYQKII------------DDP 120
Query: 109 ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPY 168
+ L + + + S+ R EW + + +AG+VGP
Sbjct: 121 FLNEL------AWDINFQSASQCR-------------EWADRVGSKDGKQRFVAGAVGPL 161
Query: 169 GASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLL 228
SL + + V+ + + +++AL+ G+DIL +ETI S A+ +
Sbjct: 162 TVSLSNSPDADDPGFRTVTFDQVKAAYIQQVRALIAGGSDILLVETIFDSLNAKAALVAI 221
Query: 229 REWPHQKAWLSFSCKDDKHISNGESFTQVART-------CYNMNPDQLIAVGVNC-VRPL 280
+E +K +S + G A+T ++NP ++VG+NC + P
Sbjct: 222 QEV-FEKDKVSLPISISAAVGRGGETMISAQTVEAFWNAVKHVNP---LSVGLNCSLGPD 277
Query: 281 MVSSLIEQLKTE-NIPLVVYPNSG 303
++ +E+L T+ + + YPN+G
Sbjct: 278 LMRPFLEELSTKSDSAISCYPNAG 301
>gi|302679980|ref|XP_003029672.1| hypothetical protein SCHCODRAFT_58848 [Schizophyllum commune H4-8]
gi|300103362|gb|EFI94769.1| hypothetical protein SCHCODRAFT_58848, partial [Schizophyllum
commune H4-8]
Length = 370
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 138/401 (34%), Gaps = 106/401 (26%)
Query: 28 LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSV 87
LWS+ + ++ H F++AGAD++ T +YQ S F D D+ + ++
Sbjct: 17 LWSAKPILEQPQVIIDAHLAFLRAGADLLSTATYQCSYRTFERAGYSDADARTAMTRAV- 75
Query: 88 DYVKEAIALEATHARIRSDDPA-RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAE 146
+A EA A DI + S+GP+GA+L EY G Y
Sbjct: 76 -----RLADEARRKYCEESGKALSDIKLVLSLGPFGATLSPAQEYDGCYPPPFGPQAYCT 130
Query: 147 WHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQAL---- 202
I PA GP GD E + + ++H R+
Sbjct: 131 SGENINAFPA---------GP-----------EGDEAESRAVQALVDFHLERLHVFAADE 170
Query: 203 -VEAGADILAIETIPASKEAQMLCRLLREWPHQKA------WLSFSCKDDKHISNGESFT 255
V DI+A ETIP +E + + + A WLS D K
Sbjct: 171 EVWHAIDIIAFETIPLLREITAVRVAMAKLVAGVADGRKAWWLSVLFPDGKFPEKRRGEP 230
Query: 256 QVARTCYNMNPDQLI-------------AVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302
V+R ++ VGVNC S L+E L+ + +P +
Sbjct: 231 SVSREVGDIVRSAFAGRTSVGDEMAVPDGVGVNCTDVSHYSGLVEALE-DALPSYI---- 285
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
G+ + + WL V+YPN G+ YD V+
Sbjct: 286 GDSV-------------------------RPWL-----------VLYPNGGDVYDPVSRT 309
Query: 363 WIDRDLCEPV--DKYV---------TDWLDEGVALVGGCCR 392
W + E DK V T W G ++GGCCR
Sbjct: 310 WKEGSGKEETWADKLVDLATRAHKATVW---GGVVLGGCCR 347
>gi|170112416|ref|XP_001887410.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637736|gb|EDR02019.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 418
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 27 PLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSS 86
PLWS+ T + V+ H F++AG+ ++MT++YQ + F E + L+ S
Sbjct: 66 PLWSATLTETDPETVIAAHLAFLEAGSLVIMTSTYQRAFETF-ERAGYGEADAVTLMNKS 124
Query: 87 VDYVKEAIALEATHARIRSDDP---ARDILIAGSVGPYGASLRDGSEYRGDY 135
V+ EA +R + +P A I IA ++GP+GA+L E+ G Y
Sbjct: 125 VELASEA------KSRFLAQNPSITATYIKIALALGPFGATLTTAQEFSGYY 170
>gi|302527038|ref|ZP_07279380.1| CalE2 [Streptomyces sp. AA4]
gi|302435933|gb|EFL07749.1| CalE2 [Streptomyces sp. AA4]
Length = 299
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPA 217
D LIAGS+GP YR D V E + H L AGAD+ IET+
Sbjct: 100 DALIAGSIGPVEDC------YRPDLVPPDDE--LRAEHGWLALQLSRAGADLFLIETMNT 151
Query: 218 SKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277
+EA++ R + +AW+SF+C DD + +GE VA + + D AV VNC
Sbjct: 152 IREARIAVREVLA-VGGRAWVSFACDDDGTLLSGEP---VAGAVHAVQRDGAEAVLVNCT 207
Query: 278 RPLMVSSLIEQLKTENIPLV-VYPN--------SGEHILAIETIPASKEAQMLCRLLREW 328
P + L L+ PN +GEH+ +P++ E + LL W
Sbjct: 208 GPEATEVALRALCRGRYGLIGACPNLEDRTGLAAGEHV--DRALPSTLEPEQFAELLARW 265
>gi|444375624|ref|ZP_21174877.1| Homocysteine S-methyltransferase [Enterovibrio sp. AK16]
gi|443680127|gb|ELT86774.1| Homocysteine S-methyltransferase [Enterovibrio sp. AK16]
Length = 296
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 145/406 (35%), Gaps = 131/406 (32%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
L+DGG +L PLWS+ L A D V Q H++FI AG D++ NSY
Sbjct: 4 LLDGGMGRELQRIGAPF--SQPLWSAQALIEAPDCVYQAHQNFIDAGCDVITVNSYACVP 61
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
E + ++L +S+ A AR +DD + + +AG + P S
Sbjct: 62 FHLGE--QRYQEQGFELAESA-----------AQIARRAADDSEKKVNVAGCIPPVLGS- 107
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
YR D L + + AR I
Sbjct: 108 -----YRPD---------------LFSAEKARPI-------------------------- 121
Query: 186 VSEATMAEWHRPRIQALVEAGA---DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
IQ LV+A A DI ETI +E + + +L+ +Q A+ +FS
Sbjct: 122 -------------IQTLVDAQAGYSDIWIAETISLIEEFETIFEVLKT-TNQPAYFAFSL 167
Query: 243 KDDK----HISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVV 298
D + + +GES R D ++ NC +P ++ I K +
Sbjct: 168 MDTEIDQPRLRSGESVADAIRVVCEKGVDGVL---FNCSQPEVMLDAIAVAKA------I 218
Query: 299 YPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358
SG+ I L + N F+ ++ ++A
Sbjct: 219 IDGSGKQI-----------------SLGAYAN-----GFTVIHQD------------HEA 244
Query: 359 VNARWIDRDLCEPVDKY---VTDWLDEGVALVGGCCRTYAEDTLHM 401
++ RDL P D+Y V WLD G +VGGCC + E ++
Sbjct: 245 NDSLTTVRDL--PADEYAAFVRAWLDAGSNIVGGCCAIFPEHIAYL 288
>gi|365874549|ref|ZP_09414082.1| Homocysteine S-methyltransferase [Thermanaerovibrio velox DSM
12556]
gi|363984636|gb|EHM10843.1| Homocysteine S-methyltransferase [Thermanaerovibrio velox DSM
12556]
Length = 806
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 121 YGASLRDGS-EYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
+G S+R S + GD E ++ + AE R D +L+AGSVGP G L+
Sbjct: 69 FGGSVRKLSLKGLGDRAEELARRS-AELARRAAGD---QVLVAGSVGPSGDMLKP----L 120
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW-L 238
GD EA M+ P+++ LVE GAD++ +ET+ KEA+ ++ + +
Sbjct: 121 GDM--SFQEAVMS--FEPQVRGLVEGGADLILVETMLDLKEAKAAVEAVKRVREDMPFVV 176
Query: 239 SFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQLK-TENIPL 296
SF+ D +G+S A + I VG NC + P ++ +L ++P+
Sbjct: 177 SFTFDRDGRTVSGDSPEAAAIWAEAVGA---IGVGANCGLGPRGYVEVVRRLAGAASLPV 233
Query: 297 VVYPNSG 303
VYPN+G
Sbjct: 234 WVYPNAG 240
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 24/123 (19%)
Query: 6 LIDGGFSSQLSTYVGDIIDG--HPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
++DGG +QL+ G P+ AV++ HR ++ +GA ++ TNS+
Sbjct: 18 VLDGGMGTQLAER------GWHPPMLPEEMCLHMPQAVLEVHRGYVASGAAVIETNSF-- 69
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GG + L L K D +E A AR + D +L+AGSVGP G
Sbjct: 70 --GGSVRKLSL---------KGLGDRAEELARRSAELARRAAGD---QVLVAGSVGPSGD 115
Query: 124 SLR 126
L+
Sbjct: 116 MLK 118
>gi|429098519|ref|ZP_19160625.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 582]
gi|426284859|emb|CCJ86738.1| Homocysteine S-methyltransferase [Cronobacter dublinensis 582]
Length = 60
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
+VYPNSGE+YDAV+ W D C + ++ W G AL+GGCCRT D + R
Sbjct: 1 MVYPNSGEQYDAVSKTWRHDGHTCHTLSHHLDAWRAAGAALIGGCCRTTPADIAALNAR 59
>gi|148974171|ref|ZP_01811704.1| homocysteine S-methyltransferase family protein [Vibrionales
bacterium SWAT-3]
gi|145965868|gb|EDK31116.1| homocysteine S-methyltransferase family protein [Vibrionales
bacterium SWAT-3]
Length = 299
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L PLWS+ L A D V Q H++FI AGA+I++TNS
Sbjct: 1 MKTLTILDGGMGRELKEIGAPF--SQPLWSAQALIEAPDFVSQAHQNFIDAGAEIIITNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E +L ++L AL AR +D ++ + +AGS+ P
Sbjct: 59 YACVPFHLGE--ELFAQRGFEL-----------AALSGELARAVADQASQAVKVAGSIPP 105
Query: 121 YGASLR 126
S R
Sbjct: 106 PFGSYR 111
>gi|70985896|ref|XP_748453.1| homocysteine S-methyltransferase [Aspergillus fumigatus Af293]
gi|66846082|gb|EAL86415.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
Af293]
gi|159128410|gb|EDP53525.1| homocysteine S-methyltransferase, putative [Aspergillus fumigatus
A1163]
Length = 313
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 159 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPAS 218
++I+G++GP LRD D E ++ E +R +++ L +AG D+LAI T+
Sbjct: 117 VVISGTMGP----LRDAYV---DTSELITLEDAREGYREQVEVLADAGVDMLAIMTVTNL 169
Query: 219 KEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 278
EA + L +E +SFS + D + G S RT ++ GVNC
Sbjct: 170 NEAIAVVELAKEV-RLPVVVSFSIESDGRLLGGRSLGSAIRTVDEKTGGSVVYYGVNCAH 228
Query: 279 PLMVSSLIEQL 289
P+ +S+ + +
Sbjct: 229 PVRISAALRDV 239
>gi|410626335|ref|ZP_11337098.1| homocysteine S-methyltransferase [Glaciecola mesophila KMM 241]
gi|410154155|dbj|GAC23867.1| homocysteine S-methyltransferase [Glaciecola mesophila KMM 241]
Length = 311
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 137/395 (34%), Gaps = 123/395 (31%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ + ++DGG +L + P+WS+ + + V HR+FI +GA ++ N+
Sbjct: 16 MSTITILDGGMGQELLRRSSREVT--PMWSADIMLNEPELVRDLHREFIDSGARVITLNT 73
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y A+ + ++ L +++ +EAI L D+ IAGS+ P
Sbjct: 74 YTATPQRLKR--ENQFEQLTHLHHAAMRVAQEAIELSQRD----------DVAIAGSLPP 121
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLIT-DDPARDILIAGSVGPYGASLRDGSEYR 179
AS E Y EA++ + +L+ PA DI I
Sbjct: 122 LVASYHP--EVSLSY-----EASLMSYRQLVALQSPASDIFIC----------------- 157
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239
ET+ + EAQ C +E + W++
Sbjct: 158 ---------------------------------ETMSSICEAQAACTAAKE-SGKPVWVA 183
Query: 240 FSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLV 297
FS D + + +GES + + P+ A+ +NC +P +S+ ++ +
Sbjct: 184 FSVSDSHPEQLRSGESLKEALAALETLAPE---AILLNCSQPEAISACWPLMQASGAKIG 240
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
Y N I A+ YP D
Sbjct: 241 AYANGFVSIDAL---------------------------------------YPG-----D 256
Query: 358 AVNARWIDRDLCEP-VDKYVTDWLDEGVALVGGCC 391
V A + DL + +W+D G +++GGCC
Sbjct: 257 TVEALEMRNDLSPAHYAAHAMNWVDNGASIIGGCC 291
>gi|424908861|ref|ZP_18332238.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392844892|gb|EJA97414.1| homocysteine/selenocysteine methylase
(S-methylmethionine-dependent) [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 308
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M++++++DGG S +L ++ P WS+ L A D V Q H +FI+AGAD V TNS
Sbjct: 1 MSDIRILDGGMSRELQRLGAEL--KQPEWSALALINAPDIVRQVHAEFIEAGADAVTTNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y + F + + K IAL AR ++ R++ +AGS+ P
Sbjct: 59 Y-----ALVPF----HIGEDRFNKEGASL----IALSGRLAREAAEASKRNVAVAGSLPP 105
>gi|408378636|ref|ZP_11176233.1| S-methyltransferase [Agrobacterium albertimagni AOL15]
gi|407747773|gb|EKF59292.1| S-methyltransferase [Agrobacterium albertimagni AOL15]
Length = 303
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
MA+ ++DGG S +L ++ P WS+ L + D V Q H +FI AGAD+V TNS
Sbjct: 1 MADTLILDGGMSRELLRLGAEL--KQPEWSALALMNSPDIVRQVHAEFIAAGADVVTTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG + +Q ++ IAL AR +D R +++AGS
Sbjct: 59 YALVPFHIG----------EERFQAEGPAL------IALSGRLAREAADSAGRKVVVAGS 102
Query: 118 VGP 120
+ P
Sbjct: 103 LPP 105
>gi|110677437|ref|YP_680444.1| homocysteine S-methyltransferase [Roseobacter denitrificans OCh
114]
gi|109453553|gb|ABG29758.1| homocysteine S-methyltransferase, putative [Roseobacter
denitrificans OCh 114]
Length = 296
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 135/414 (32%), Gaps = 135/414 (32%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + L+DGG +L GD PLWS+ + V H D+ AGA + TNS
Sbjct: 1 MTQITLLDGGMGQELVHRAGD--KPTPLWSAQVMVDHPGLVEAVHADYFAAGATVATTNS 58
Query: 61 YQAS----IGGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILI 114
Y G ME F DL YQ S EA A ATH R I
Sbjct: 59 YAIHHDRLEGTGMEDAFEDL-----YQRALS------EASAARATHGSGR---------I 98
Query: 115 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRD 174
AG++GP AS YR D P+R++ + P
Sbjct: 99 AGALGPLVAS------YRPDL------------------HPSREVAV-----PL------ 123
Query: 175 GSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234
+VE AL+ D+L +ET+ + A+ R +
Sbjct: 124 -------FVE--------------AAALLAPECDLLILETVASVAHARDALEGARST-NL 161
Query: 235 KAWLSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292
WLS + D + +GE N + AV VNC P V+ + L
Sbjct: 162 PVWLSLTVSDSDGMQLRSGEPLEDALEVAANAD-----AVLVNCSAPEAVTKAMPILAQS 216
Query: 293 NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNS 352
P Y N Q+ L+E P
Sbjct: 217 GKPFGGYANG--------------FVQISEDFLKEKPT---------------------- 240
Query: 353 GERYDAVNARWIDRDLC-EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
D + R RD+ YV +W+ G +VGGCC + +K RL
Sbjct: 241 ---VDTLETR---RDMGPRAYAGYVMEWVSAGATIVGGCCEVGPKHIAELKKRL 288
>gi|260574482|ref|ZP_05842486.1| homocysteine S-methyltransferase [Rhodobacter sp. SW2]
gi|259023378|gb|EEW26670.1| homocysteine S-methyltransferase [Rhodobacter sp. SW2]
Length = 297
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 137/393 (34%), Gaps = 121/393 (30%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ L+DGG +L GD PLW++ + D V Q H D+ AGA + TN+Y
Sbjct: 2 QITLLDGGMGQELLARTGDAPT--PLWATQVMLDHPDVVRQIHADYFAAGATVATTNTYA 59
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ +D +L + VD++ A+ +A + IAGS+GP
Sbjct: 60 -----------IHHD---RLERFGVDHLFGALHAKALAQAQEARAAHGSGRIAGSLGPLV 105
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
AS YR + V+EA + Y
Sbjct: 106 AS------YRPETCPPVAEAAV------------------------------------KY 123
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQ-MLCRLLREWPHQKAWLSFS 241
E I AL+ G D ET+ + ++A+ L L + WLS +
Sbjct: 124 AE--------------IAALLAPGVDFFLCETMASVQQAEGALAGALTAG--KPVWLSVT 167
Query: 242 C--KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVY 299
D + +GE+ +A P AV VNC P +++ + Q+ +P Y
Sbjct: 168 VDDADGSRLRSGEAVADLAPLVARYKP---AAVLVNCSVPEAMAAALAQVAGFGVPFGAY 224
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
N HI A +F + ++ + R+D
Sbjct: 225 ANGFTHINA---------------------------AFKADAPTVDVLEH-----RHDLT 252
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR 392
A++ D + W+ +G +VGGCC
Sbjct: 253 PAKYAD---------FAMFWVAQGATIVGGCCE 276
>gi|227818592|ref|YP_002822563.1| MHT1, Homocysteine/selenocysteine methylase [Sinorhizobium fredii
NGR234]
gi|36958847|gb|AAQ87272.1| homocysteine S-methyltransferase (S-methylmethionine)
[Sinorhizobium fredii NGR234]
gi|227337591|gb|ACP21810.1| predicted MHT1, Homocysteine/selenocysteine methylase
[Sinorhizobium fredii NGR234]
Length = 302
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +LS ++ P WS+ L + V Q HR+FI+AGAD++ TNS
Sbjct: 1 MNQIRILDGGMSRELSRLGAELR--QPEWSALALMENPEIVGQVHREFIEAGADVITTNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA-RDILIAGSVG 119
Y + + + +S + E L AR +D A R +L+AGS+
Sbjct: 59 YAL----------VPFHIGEERFRSEGPSLTE---LAGKLAREAADGSADRKVLVAGSLP 105
Query: 120 P 120
P
Sbjct: 106 P 106
>gi|363892641|ref|ZP_09319803.1| hypothetical protein HMPREF9630_01881 [Eubacteriaceae bacterium
CM2]
gi|361963406|gb|EHL16481.1| hypothetical protein HMPREF9630_01881 [Eubacteriaceae bacterium
CM2]
Length = 796
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 103/277 (37%), Gaps = 73/277 (26%)
Query: 157 RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP 216
R+ +A +GP G L+ + + + + I+A VEAGAD++AIET+
Sbjct: 103 REKFVALDIGPLGKLLKP--------IGDLEFEDAVDLFKEMIEAGVEAGADLIAIETMS 154
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
+ E + +E + + DDK + NG V + D L G+NC
Sbjct: 155 DTYELKAAVIAAKEVCDLPIIATVAFSDDKRLLNGADVKSVIALLEGLRVDVL---GLNC 211
Query: 277 -VRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
+ P + L+E+ + + P+ + PN+G IP
Sbjct: 212 GLDPRNIDDLVEEFISYSSTPIAIKPNAG--------IP--------------------- 242
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEP--VDKYVTDWLDEGVALVGGCCR 392
EN+ V+ N EP K V D++++GV LVGGCC
Sbjct: 243 -------ENVNGVIKFN-----------------LEPDGFGKIVGDFVEKGVMLVGGCCG 278
Query: 393 TYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSY 429
T E + D T+ H L SSY
Sbjct: 279 TTPEHIKKLYEYTKDKKICEQTF-----KNHTLISSY 310
>gi|402837288|ref|ZP_10885813.1| homocysteine S-methyltransferase [Eubacteriaceae bacterium OBRC8]
gi|402275405|gb|EJU24558.1| homocysteine S-methyltransferase [Eubacteriaceae bacterium OBRC8]
Length = 783
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 103/277 (37%), Gaps = 73/277 (26%)
Query: 157 RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP 216
R+ +A +GP G L+ + + + + I+A VEAGAD++AIET+
Sbjct: 90 REKFVALDIGPLGKLLKP--------IGDLEFEDAVDLFKEMIEAGVEAGADLIAIETMS 141
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
+ E + +E + + DDK + NG V + D L G+NC
Sbjct: 142 DTYELKAAVIAAKEVCDLPIIATVAFSDDKRLLNGADVKSVIALLEGLRVDVL---GLNC 198
Query: 277 -VRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
+ P + L+E+ + + P+ + PN+G IP
Sbjct: 199 GLDPRNIDDLVEEFISYSSTPIAIKPNAG--------IP--------------------- 229
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEP--VDKYVTDWLDEGVALVGGCCR 392
EN+ V+ N EP K V D++++GV LVGGCC
Sbjct: 230 -------ENVNGVIKFN-----------------LEPDGFGKIVGDFVEKGVMLVGGCCG 265
Query: 393 TYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSY 429
T E + D T+ H L SSY
Sbjct: 266 TTPEHIKKLYEYTKDKKICEQTF-----KNHTLISSY 297
>gi|320160605|ref|YP_004173829.1| methylenetetrahydrofolate reductase [Anaerolinea thermophila UNI-1]
gi|319994458|dbj|BAJ63229.1| methylenetetrahydrofolate reductase [Anaerolinea thermophila UNI-1]
Length = 628
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 130/346 (37%), Gaps = 86/346 (24%)
Query: 132 RGDYVEHVSEATMAEWHRLITDDPAR-------DILIAGSVGPYGASLRDGSEYRGDYVE 184
R +H E +AE +R D R DILIAG VGP G L + + ++
Sbjct: 73 RYKLAKHGLENQVAEINRAGVDLAQRVVLASFKDILIAGDVGPLGVRL---APFGRVQLD 129
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK 243
+A + + IQAL +AG D+L IET+ E R R P S +
Sbjct: 130 QAYDAFLEQ-----IQALSDAGIDLLIIETMTDLYEVIEAIRAARAVDPDLPVVASMTFT 184
Query: 244 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV-RPLMVSSLIEQLKTENIPLVVY--- 299
D G+S +VAR + D +G+NC P + +++Q++ + +P VY
Sbjct: 185 RDDRTMLGDSPEKVARRIHEAGAD---VIGINCSGGPNQILRILKQMR-QAVPDAVYSVM 240
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PN+G WP Q ++YP + E +
Sbjct: 241 PNAG------------------------WPEQVGG-----------RIMYPAAPEYF--- 262
Query: 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE------DTLHMKHR--LDDWVSG 411
+Y + + G L+GGCC T + LH R L D +
Sbjct: 263 -------------GEYAQAFCEAGATLMGGCCGTTPKHIEAMAQALHTNPRPCLSDQILV 309
Query: 412 LSTYVGDIIDG--HPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFL 455
+S ++ + HP + LA + VV D +G T+ L
Sbjct: 310 ISNNHQEVTEQPEHPTQLAQKLAQGQ-FVVAVEMDPPRGFSTHKLL 354
>gi|50084595|ref|YP_046105.1| homocysteine S-methyltransferase family protein [Acinetobacter sp.
ADP1]
gi|49530571|emb|CAG68283.1| putative homocysteine S-methyltransferase family protein
[Acinetobacter sp. ADP1]
Length = 292
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 120/294 (40%), Gaps = 83/294 (28%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQA 63
+K++DGGF +L+ P WS+ L A + V + H DFI+AGA ++ TN+Y
Sbjct: 1 MKILDGGFGRELARRGAPF--RQPEWSALALTEAPEIVKEVHLDFIRAGAQVITTNNYAV 58
Query: 64 SIGGFMEFLDLDYDSSYQLIKSSVDY-VKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
+ + + D V + + + + AR+ + + + IAG + P
Sbjct: 59 --------------VPFHIGQERFDREVTQLVKVATSQARLAVQESGQPVQIAGCLPPLF 104
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
S YR D + +A + I + + D+ D+
Sbjct: 105 GS------YRADLFDQSKAEALA---KPIIEALSPDV---------------------DF 134
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
+++ +AE + TI Q+L + RE+ W+SF+
Sbjct: 135 WLAETQSCLAE------------------VRTI-----HQLLPKDGREF-----WVSFTL 166
Query: 243 KDDKHIS-----NGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT 291
+D++ ++ +GE+ Q A+ + + + A+ NC +P ++ IE++++
Sbjct: 167 QDEQALTEAKLRSGENIQQAAQLVHELGAN---AILFNCCQPEVILQAIEEIRS 217
>gi|374312293|ref|YP_005058723.1| Methionine synthase., Methylenetetrahydrofolate reductase (NAD(P)H)
[Granulicella mallensis MP5ACTX8]
gi|358754303|gb|AEU37693.1| Methionine synthase., Methylenetetrahydrofolate reductase (NAD(P)H)
[Granulicella mallensis MP5ACTX8]
Length = 627
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 151 ITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADIL 210
I + + +AG+VGP G L E G + AE +I AL E G D++
Sbjct: 100 IREKQGTEAFVAGAVGPLGVRL----EPLGKLSLEEAREAFAE----QISALAEGGVDLI 151
Query: 211 AIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQL 269
IET+ + EA+ R+ PH K + + +D + +G S A + D
Sbjct: 152 IIETMMSIDEAEQAVLAARQVAPHLKVAVMVTVDEDGNCLDGTSPEVAAERLTAVGAD-- 209
Query: 270 IAVGVNCVR-PLMVSSLIEQLKTEN-IPLVVYPNSG 303
A+G NC P V ++IE+++ +PL+ PN+G
Sbjct: 210 -AIGCNCSSGPATVLTVIERMREATALPLLAMPNAG 244
>gi|444425731|ref|ZP_21221166.1| homocysteine S-methyltransferase [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241075|gb|ELU52605.1| homocysteine S-methyltransferase [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 148/423 (34%), Gaps = 133/423 (31%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L PLWS+ L + + V Q H +FI+AGA+I++ NS
Sbjct: 5 MKKLTILDGGMGRELKRMSAPF--SQPLWSAQALIESPEFVYQAHDNFIRAGAEIIIANS 62
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y + + +L + A A +SD+P R +AG + P
Sbjct: 63 YAC----------VPFHLGQELYDQQGGELARFAAKIARECADKSDNPVR---VAGCIPP 109
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRG 180
S YR D E + +G
Sbjct: 110 AFGS------YRPDLFEPI---------------------------------------QG 124
Query: 181 DYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240
+ + AE+ D+ ETI + KE + L R+ A+ +F
Sbjct: 125 EAIFQTLFEAQAEY------------VDLWIAETICSLKELKCLQRVFATSAKPTAY-AF 171
Query: 241 SCKDDK----HISNGESFTQ-VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE--- 292
S DD + +GE+ TQ + + + D I++ NC P +++ + KT
Sbjct: 172 SLSDDSLETALLRSGETVTQAIEQLTQSKQTDHTISIYFNCSVPEVMAKAVSDTKTVLDQ 231
Query: 293 ---NIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349
+I + VY N+ I ++ EA + +RE ++ +L+F+
Sbjct: 232 HNLDIEIGVYANN------FTAIKSNHEANSALQSMRELTPEE-YLAFA----------- 273
Query: 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWV 409
+W G ++VGGCC E H+K L DW
Sbjct: 274 ---------------------------QEWYQRGASVVGGCCGIGPE---HIK-ALSDWR 302
Query: 410 SGL 412
L
Sbjct: 303 RSL 305
>gi|323345809|gb|EGA80175.1| Sam4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 304
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 127/321 (39%), Gaps = 88/321 (27%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWSSY-FLATA---------KDAVVQTHRDFIKAGA 53
V ++DGG ++L I +P+WS+ F++ + + V + DF+ AGA
Sbjct: 17 VLVLDGGQGTELENR--GIKVANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAGA 74
Query: 54 DIVMTNSYQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
+I+MT +YQ S E + S Y L+ VD+ + I D
Sbjct: 75 EILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCI--------------GEDK 120
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+ G +GP+GA + E+ GD YGA
Sbjct: 121 YLIGCIGPWGAHI--CREFTGD---------------------------------YGAEP 145
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLREW 231
+ Y ++ +P+++ + D++ ETIP E + +
Sbjct: 146 ENIDFY--------------QYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDESI 191
Query: 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCV----RPLMVS 283
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV P ++
Sbjct: 192 LSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDILE 250
Query: 284 SLIEQLKTENIPLVVYPNSGE 304
SL + L N+ L+ YPNSGE
Sbjct: 251 SLHQALP--NMALLAYPNSGE 269
>gi|340516537|gb|EGR46785.1| S-methylmethionine-dependent Homocysteine/selenocysteine
methylase-like protein [Trichoderma reesei QM6a]
Length = 354
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 108/282 (38%), Gaps = 75/282 (26%)
Query: 155 PARDILIAGSVGPYGASLRDGSEYRGDY-VEHVSEATMAEWHRPRIQAL-----VEAGAD 208
P +A S+GPYGA + EY G Y +H S+ + WHR R++ +
Sbjct: 114 PPHPCAVALSLGPYGACMIPSQEYSGAYDAQHDSQEALYLWHRQRMELFARVPDIRHSIT 173
Query: 209 ILAIETIPASKEAQMLCRLLREWPHQKA----WLS--FSCKDDKHISNGESFTQVARTCY 262
+A+ETIP E L R + P + W+S F ++D+ +G S + R
Sbjct: 174 YMALETIPRLDEIVALRRAVAAVPALSSGIPFWMSCLFPNEEDETTPDGSSPEAIIRAML 233
Query: 263 NMNPDQLI----AVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEA 318
+ + AVG+NC + + SL+ + Y + +L TI
Sbjct: 234 DPALAETAAVPWAVGINCTKVWKLDSLLRR----------YEAAIRDLLHEGTI------ 277
Query: 319 QMLCRLLREWPNQKAWLSFSCKTENIPLVVYPN--SGERYDAVNARWI---------DRD 367
++WP LV+YP+ +GE Y+ +W DR
Sbjct: 278 -------KKWPA---------------LVLYPDGTNGEVYNTTTQQWEIPQGSEQQHDRV 315
Query: 368 LCEPVDKYVT-------DWLDEGVALVGGCCRTYAEDTLHMK 402
E K V DW + +VGGCCR D ++
Sbjct: 316 PWEAQLKQVVRATEARGDWPE---IIVGGCCRALPSDIKRLR 354
>gi|402309246|ref|ZP_10828241.1| homocysteine S-methyltransferase [Eubacterium sp. AS15]
gi|400372741|gb|EJP25679.1| homocysteine S-methyltransferase [Eubacterium sp. AS15]
Length = 798
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASK 219
IA VGP G L+ + D+ E V E + I+ +AGAD++AIET+ +
Sbjct: 106 FIALDVGPIGKLLKPVGDL--DFEEAV------EIFKEVIKTGADAGADLIAIETMSDTY 157
Query: 220 EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VR 278
E + +E + + DDK + NG V + D A+G+NC +
Sbjct: 158 ELKAAVLAAKEVCDLPIIATVAFSDDKRLLNGADVKTVISLLEGLRVD---ALGMNCGLD 214
Query: 279 PLMVSSLIEQ-LKTENIPLVVYPNSG--EHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
P + ++E+ L+ ++PLV+ PN+G E+I I + E +++RE+ A +
Sbjct: 215 PRNIKDIVEEFLQYSSLPLVLKPNAGIPENING--EIKFNMEPDDFGKIMREFVEMGANI 272
Query: 336 SFSC 339
C
Sbjct: 273 VGGC 276
>gi|374312134|ref|YP_005058564.1| Methionine synthase [Granulicella mallensis MP5ACTX8]
gi|358754144|gb|AEU37534.1| Methionine synthase [Granulicella mallensis MP5ACTX8]
Length = 366
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 130/332 (39%), Gaps = 71/332 (21%)
Query: 2 ANVKLIDGGFSSQLSTY---------------VGDIIDGHPLWSSYFLATAKDAVVQTHR 46
+ + +IDG + + TY D+++ L+S T + HR
Sbjct: 15 SRIAIIDGAMGTTIRTYGMTEADIRGERFKDSKKDLLNNGDLFS----LTQPKMICDIHR 70
Query: 47 DFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSD 106
F++AGADI+ TN++ A+ T + D
Sbjct: 71 RFLEAGADIIETNTFGAT--------------------------------GITQSEFFVD 98
Query: 107 DPARDILIAGSVGP--YGASLRDGSEYRGDYVEHVSEATMA---EWHRLITDDPARDILI 161
DP G P Y + D ++ D ++E + EW ++ R +
Sbjct: 99 DPREH---GGRKDPEFYQKIIED--KFLNDLAWEINEQSARQCREWADRTANETGRQRFV 153
Query: 162 AGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEA 221
AG++GP SL + + V+ + + +++AL+ G+D+L +ETI S A
Sbjct: 154 AGAIGPLTVSLSNSPDADDSGFRVVTFDQVKAAYVQQVRALIAGGSDLLLVETIFDSLNA 213
Query: 222 QMLCRLLREWPHQKAWLSFSCKDDKHIS-----NGESFTQVARTCYNMNPDQLI---AVG 273
+ +RE Q S + + IS GE+ T N Q + +VG
Sbjct: 214 KAALVAIREVFDQDGLTSNNKELPVMISAAVGRGGETLISAQTTEAFWNAVQHVKPLSVG 273
Query: 274 VNC-VRPLMVSSLIEQLKTE-NIPLVVYPNSG 303
+NC + P ++ +E+L + ++ + YPN+G
Sbjct: 274 LNCSLGPDLMYPFLEELSEKADVAISCYPNAG 305
>gi|223938282|ref|ZP_03630177.1| homocysteine S-methyltransferase [bacterium Ellin514]
gi|223892996|gb|EEF59462.1| homocysteine S-methyltransferase [bacterium Ellin514]
Length = 624
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 156 ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI 215
R +AGSVGP A D S +S T +R +++ALV G D L +ET
Sbjct: 98 GRGAFVAGSVGPLSA---DPSS--------LSTQTKDSAYREQLEALVSEGVDALFLETF 146
Query: 216 PASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNG----ESFTQVARTCYNMNPDQLIA 271
E + R+ R + S S DD H ++G E+F+++ ++
Sbjct: 147 NRLDELAFVLRIARSLGNTPIIASLSFGDDGHTADGLRINEAFSRLKEAGADV------- 199
Query: 272 VGVNC-VRPLMVSSLIEQLKTENIPLV-VYPNSG 303
VG+NC P + L+E+L L+ +YPN+G
Sbjct: 200 VGLNCHFGPTIAEKLLEELIVRPGDLISIYPNAG 233
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 44/204 (21%)
Query: 25 GHPLWSSYFLATAK--DAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQL 82
G PL +SY + + V Q HRD++ AGA ++ TN++ A+ +F L
Sbjct: 27 GQPLNASYDALNLQHPEIVSQLHRDYLDAGAHLIETNTFGANRIKLEKF---------GL 77
Query: 83 IKSSVDYVKEA--IALEATHARIRSDDPARDILIAGSVGPYGA------SLRDGSEYRGD 134
+ +VD K +ALE R +AGSVGP A + S YR
Sbjct: 78 AQKTVDINKHGAQLALEVAC--------GRGAFVAGSVGPLSADPSSLSTQTKDSAYREQ 129
Query: 135 YVEHVSEAT----MAEWHRLITDDPARDILIAGSVG--PYGASLRDGSEYRGDYVEHVSE 188
VSE + ++RL D+ A + IA S+G P ASL G + ++E
Sbjct: 130 LEALVSEGVDALFLETFNRL--DELAFVLRIARSLGNTPIIASLSFGDDGHTADGLRINE 187
Query: 189 ATMAEWHRPRIQALVEAGADILAI 212
A L EAGAD++ +
Sbjct: 188 A---------FSRLKEAGADVVGL 202
>gi|89054089|ref|YP_509540.1| homocysteine S-methyltransferase [Jannaschia sp. CCS1]
gi|88863638|gb|ABD54515.1| homocysteine S-methyltransferase [Jannaschia sp. CCS1]
Length = 297
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 133/396 (33%), Gaps = 127/396 (32%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L + + PLWS+ + V + HRDF AGA I N+
Sbjct: 1 MTEITILDGGMGQELVSR--SDVPPTPLWSTDVMRAKPHLVGEVHRDFFNAGAQIATANT 58
Query: 61 YQASIGGFMEFLDLDYDSSY-QLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG 119
Y + D ++ + L K+++D ++A D L+AG++G
Sbjct: 59 YAIHRD---RLVRADAEAEFASLHKTALDQARQA------------RDAHGSGLVAGAIG 103
Query: 120 PYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYR 179
P GAS YR D S A V Y
Sbjct: 104 PLGAS------YRPDLTPQHSAA----------------------VALY----------- 124
Query: 180 GDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP--ASKEAQMLCRLLREWPHQKAW 237
A +A H P + D+L ETI A EA + L P W
Sbjct: 125 ---------AEIATLHAPLV--------DLLICETITSLAQAEAVLDACLGHGVP---VW 164
Query: 238 LSFSC--KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIP 295
L+FS +D + +GE V + A+ NC P ++ + ++ L P
Sbjct: 165 LAFSVDDRDGTRLRSGEGLGDVIAMA-----GEAAALLANCSVPEVMPAALDILGRAGTP 219
Query: 296 LVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGER 355
Y N I A L + P A S +T+ P
Sbjct: 220 FGAYANGFTEISA--------------GFLDDAPTVDALTS---RTDMGP---------- 252
Query: 356 YDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391
E +V W+D+G +VGGCC
Sbjct: 253 --------------EAYADHVMGWIDQGATIVGGCC 274
>gi|383764492|ref|YP_005443474.1| putative methylenetetrahydrofolate reductase [Caldilinea aerophila
DSM 14535 = NBRC 104270]
gi|381384760|dbj|BAM01577.1| putative methylenetetrahydrofolate reductase [Caldilinea aerophila
DSM 14535 = NBRC 104270]
Length = 625
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 92/258 (35%), Gaps = 65/258 (25%)
Query: 156 ARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI 215
R I IAG VGP G L+ E E R +I L EAGAD+L ET
Sbjct: 102 GRAIFIAGDVGPLGKRLQPEGPLSATEAE--------EAFREQISVLWEAGADLLLFETF 153
Query: 216 PASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 275
+E ++ R R+ S + +D G + + R + D VGVN
Sbjct: 154 IDLEELELAVRTARKVCDLPIVASMTFAEDGLTLVGHTPEEAVRRLHAAGAD---VVGVN 210
Query: 276 C-VRPLMVSSLIEQL--KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK 332
C V P ++ +EQ+ ++ L++ PN+G P E +
Sbjct: 211 CSVGPAAMAQTLEQMHAAAPDVRLIIMPNAG--------FPERVEGRFY----------- 251
Query: 333 AWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR 392
YP S E + + +L +G +VGGCC
Sbjct: 252 ----------------YPASPEYF----------------ARQTALFLTQGARIVGGCCG 279
Query: 393 TYAEDTLHMKHRLDDWVS 410
T M+ LD+ ++
Sbjct: 280 TTPMHIRAMRAALDEHLT 297
>gi|363888880|ref|ZP_09316257.1| hypothetical protein HMPREF9628_00901 [Eubacteriaceae bacterium
CM5]
gi|361967257|gb|EHL20090.1| hypothetical protein HMPREF9628_00901 [Eubacteriaceae bacterium
CM5]
Length = 796
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 73/277 (26%)
Query: 157 RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP 216
R+ +A +GP G L+ + + + + I+A VEAGAD++AIET+
Sbjct: 103 REKFVALDIGPLGKLLKP--------IGDLEFEDAVDIFKEMIEAGVEAGADLIAIETMS 154
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
+ E + +E + + DDK + NG V + D L G NC
Sbjct: 155 DTYELKAAVIAAKEVCDLPIIATVAFSDDKRLLNGADAKSVIALLEGLRVDVL---GFNC 211
Query: 277 -VRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
+ P + L+E+ + + P+ + PN+G IP
Sbjct: 212 GLDPRNIDDLVEEFISYSSTPIAIKPNAG--------IP--------------------- 242
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEP--VDKYVTDWLDEGVALVGGCCR 392
EN+ V+ N EP K V D++++GV LVGGCC
Sbjct: 243 -------ENVNGVIKFN-----------------LEPDGFGKIVGDFVEKGVMLVGGCCG 278
Query: 393 TYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSY 429
T E + D T+ H L SSY
Sbjct: 279 TTPEHIKKLYEYTKDKKICKQTF-----KNHTLISSY 310
>gi|333909240|ref|YP_004482826.1| homocysteine S-methyltransferase [Marinomonas posidonica
IVIA-Po-181]
gi|333479246|gb|AEF55907.1| homocysteine S-methyltransferase [Marinomonas posidonica
IVIA-Po-181]
Length = 307
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M N+ L+DGG +L PLWS+ L A V Q H +FI+AGADI+ NS
Sbjct: 1 MNNLTLLDGGIGRELKRIGAPF--SQPLWSAQSLIEAPHYVTQVHENFIQAGADIITVNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E L YQ +++ IA +A +++ +L+AGS+ P
Sbjct: 59 YACVPFHLGETL-------YQQQGATLARQAAIIAKDA------ANNAPHPVLVAGSLPP 105
Query: 121 YGASLR 126
S R
Sbjct: 106 PLGSYR 111
>gi|306821659|ref|ZP_07455257.1| vitamin B12-dependent methionine synthase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550404|gb|EFM38397.1| vitamin B12-dependent methionine synthase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 798
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASK 219
IA VGP G L+ + D+ E V E + I+ +AGAD++AIET+ +
Sbjct: 106 FIALDVGPIGKLLKPVGDL--DFEEAV------EIFKEVIKTGADAGADLIAIETMSDTY 157
Query: 220 EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VR 278
E + +E + + DDK + NG V + D A+G+NC +
Sbjct: 158 ELKAAVLAAKEVCDLPIIATVAFSDDKRLLNGADAKTVISLLEGLRVD---ALGMNCGLD 214
Query: 279 PLMVSSLIEQ-LKTENIPLVVYPNSG--EHILAIETIPASKEAQMLCRLLREWPNQKAWL 335
P + ++E+ L+ ++PLV+ PN+G E+I I + E +++RE+ A +
Sbjct: 215 PRNIKDIVEEFLQYSSLPLVLKPNAGIPENING--EIKFNMEPDDFGKIMREFVEMGANI 272
Query: 336 SFSC 339
C
Sbjct: 273 VGGC 276
>gi|283779299|ref|YP_003370054.1| methionine synthase [Pirellula staleyi DSM 6068]
gi|283437752|gb|ADB16194.1| methionine synthase [Pirellula staleyi DSM 6068]
Length = 1234
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 73/287 (25%)
Query: 29 WSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88
+S T + + + HR ++ AGADI+ TN++ AS+ G EF DL + ++ ++V
Sbjct: 57 FSDILCLTRANDITEIHRKYLAAGADIIETNTFGASVIGMEEF-DLPNELVREINFAAVK 115
Query: 89 YVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWH 148
+ IA + +R DP+R +AGS+GP + + +T E
Sbjct: 116 CAR--IACDEFTSR----DPSRPRFVAGSIGP--------------TTKQTAISTRVE-- 153
Query: 149 RLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGAD 208
DPA YR E M E + +I+ALVEAG D
Sbjct: 154 -----DPA---------------------YRAVTFEQ-----MVESYSGQIEALVEAGVD 182
Query: 209 ILAIETIPASKEAQ----MLCRLLREWPHQKAWL---SFSCKDDKHIS--NGESF-TQVA 258
I+ ET+ + + L R ++ + A + +F+ +S N E+F +A
Sbjct: 183 IILPETVIDTLNLKACLFALERHFKKVGERTAVMVSGTFNAAGVTFVSSQNVEAFWNSIA 242
Query: 259 RTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQL-KTENIPLVVYPNSG 303
L++VG+NC + P ++ +E+L + + YPN+G
Sbjct: 243 HV-------PLLSVGMNCALGPDVMRPHLEELQRVSGAKISCYPNAG 282
>gi|363895643|ref|ZP_09322633.1| hypothetical protein HMPREF9629_00915 [Eubacteriaceae bacterium
ACC19a]
gi|361956610|gb|EHL09923.1| hypothetical protein HMPREF9629_00915 [Eubacteriaceae bacterium
ACC19a]
Length = 796
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 102/277 (36%), Gaps = 73/277 (26%)
Query: 157 RDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP 216
R+ +A +GP G L+ + + + + I+A VEAGAD++AIET+
Sbjct: 103 REKFVALDIGPLGKLLKP--------IGDLEFEDAVDIFKEMIEAGVEAGADLIAIETMS 154
Query: 217 ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
+ E + +E + + DDK + NG V + D L G NC
Sbjct: 155 DTYELKAAVIAAKEVCDLPIIATVAFSDDKRLLNGADAKSVIALLEGLRVDVL---GFNC 211
Query: 277 -VRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAW 334
+ P + L+E+ + + P+ + PN+G IP
Sbjct: 212 GLDPRNIDDLVEEFISYSSTPIAIKPNAG--------IP--------------------- 242
Query: 335 LSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEP--VDKYVTDWLDEGVALVGGCCR 392
EN+ V+ N EP K V D++++GV LVGGCC
Sbjct: 243 -------ENVNGVIKFN-----------------LEPDGFGKIVGDFVEKGVMLVGGCCG 278
Query: 393 TYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSY 429
T E + D T+ H L SSY
Sbjct: 279 TTPEHIKKLYEYTKDKKICKQTF-----KNHTLISSY 310
>gi|254510916|ref|ZP_05122983.1| methionine synthase I [Rhodobacteraceae bacterium KLH11]
gi|221534627|gb|EEE37615.1| methionine synthase I [Rhodobacteraceae bacterium KLH11]
Length = 337
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 98/263 (37%), Gaps = 60/263 (22%)
Query: 145 AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE 204
AE R + D R +++AGSVGP G + + V +S A E + +AL
Sbjct: 91 AELGREVADKADRPVIVAGSVGPTGEIM--------EPVGTLSHAEAVEMFHEQAEALKA 142
Query: 205 AGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM 264
GAD+L +ETI A +E + A +FS D SF RT +
Sbjct: 143 GGADVLWLETISAPEE------------FRAAAEAFSMADMPWCGT-MSFDTAGRTMMGV 189
Query: 265 NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324
L ++++E L N PL N G A + R
Sbjct: 190 TSSDL-------------ANIVETLP--NPPLAFGANCGTG------------ASDILRT 222
Query: 325 LREWPNQKAWLSFSCKTENIPLVVYPNSG-ERYDAVNARWIDRDLCEPVDKYVTDWLDEG 383
+ L F+ + PL+ N+G +Y V+ E + +Y D G
Sbjct: 223 I---------LGFAAQGTERPLISKGNAGIPKY--VDGHIHYDGTPELMGQYAAMARDAG 271
Query: 384 VALVGGCCRTYAEDTLHMKHRLD 406
++GGCC T E M+ LD
Sbjct: 272 ATIIGGCCGTMPEHLRKMREALD 294
>gi|359446169|ref|ZP_09235867.1| hypothetical protein P20439_2200 [Pseudoalteromonas sp. BSi20439]
gi|358039972|dbj|GAA72116.1| hypothetical protein P20439_2200 [Pseudoalteromonas sp. BSi20439]
Length = 300
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ + ++DGG +L PLWS+ L A V Q H+ FI AGA+I+ NS
Sbjct: 1 MSKLTILDGGMGRELKRMGAPF--SQPLWSAQALIEAPQCVTQAHQAFINAGAEIITVNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E L YQ +++ IA EA + +++L+AGS+ P
Sbjct: 59 YACVPFHLGETL-------YQAQGATLSQQAAVIAKEA------AQKTKQNVLVAGSLPP 105
Query: 121 YGASLRDGSEYRGDYVE 137
S YR D+ +
Sbjct: 106 AFGS------YRADFFQ 116
>gi|398352505|ref|YP_006397969.1| homocysteine S-methyltransferase (S-methylmethionine)
[Sinorhizobium fredii USDA 257]
gi|390127831|gb|AFL51212.1| homocysteine S-methyltransferase (S-methylmethionine)
[Sinorhizobium fredii USDA 257]
Length = 311
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ ++++DGG S +L ++ P WS+ L + + V + HR+FI AGAD++ TNS
Sbjct: 1 MSQLRILDGGMSRELIRLGAEL--RQPEWSALALMESSEIVGRVHREFIDAGADVITTNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPA-RDILIAGSVG 119
Y + + + +S + I L AR +D+ A R +L+AGS+
Sbjct: 59 YAL----------VPFHIGEERFRSE---GRSLIELAGKLAREAADERADRKVLVAGSLP 105
Query: 120 PYGAS 124
P S
Sbjct: 106 PIFGS 110
>gi|228911868|ref|ZP_04075619.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
gi|228847778|gb|EEM92681.1| Homocysteine S-methyltransferase [Bacillus thuringiensis IBL 200]
Length = 88
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
P++VYPNSGE Y+ W + C ++ +W G L+GGCCRT
Sbjct: 15 PIIVYPNSGETYNPETKTWHGHEQCNALNIQSEEWYQAGARLIGGCCRT 63
>gi|322436197|ref|YP_004218409.1| homocysteine S-methyltransferase [Granulicella tundricola MP5ACTX9]
gi|321163924|gb|ADW69629.1| homocysteine S-methyltransferase [Granulicella tundricola MP5ACTX9]
Length = 637
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 25/167 (14%)
Query: 144 MAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALV 203
MAE H A + +AG++GP G + DG++ V+E +++ALV
Sbjct: 109 MAEKH-------ASEAFVAGAMGPLGIRIGDGNK--------VTEEEAYAAFAVQVKALV 153
Query: 204 EA----GADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD-DKHISNGESFTQVA 258
E GAD+L +ET+ A EA++ + + ++ D + + +G S + A
Sbjct: 154 EGGPGVGADLLILETLMAMNEARLAIQAAKAEGQGLPVIAMVTVDVNGNCLDGTSAEEAA 213
Query: 259 RTCYNMNPDQLIAVGVNCV-RPLMVSSLIEQLKTE-NIPLVVYPNSG 303
R D AVG NC P V ++IE+++T +PL PN+G
Sbjct: 214 RLMTEWGAD---AVGCNCSDGPATVLAVIERMRTATKLPLAAMPNAG 257
>gi|126725294|ref|ZP_01741136.1| methionine synthase I [Rhodobacterales bacterium HTCC2150]
gi|126704498|gb|EBA03589.1| methionine synthase I [Rhodobacterales bacterium HTCC2150]
Length = 337
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 101/269 (37%), Gaps = 70/269 (26%)
Query: 145 AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATM---AEWHRPRIQA 201
AE R I D R +++AGSVGP GD + + T E + +
Sbjct: 91 AEIGREIADASGRQVVVAGSVGPT-----------GDIMAPMGSLTFDSAVEMFHEQAEG 139
Query: 202 LVEAGADILAIETIPASKEAQMLCRL--LREWPHQKAWLSFSCKDDKHISNGESFTQVAR 259
L GAD+ +ETI A +E Q R L E P W + SF R
Sbjct: 140 LKAGGADVAWVETISAPEEFQAAARAFELAELP----W-----------AGTMSFDTAGR 184
Query: 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQ 319
T M ++A ++E+L N PL N G + AS
Sbjct: 185 TMMGMTSRDMVA-------------MVEKLP--NAPLAFGANCG--------VGASD--- 218
Query: 320 MLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSG-ERYDAVNARWIDRDLCEPVDKYVTD 378
LLR L F+ T +P++ N+G +Y V+ E + +Y
Sbjct: 219 ----LLR------TVLGFAASTPQLPVIAKGNAGIPKY--VDGHIHYDGTPELMGQYAVL 266
Query: 379 WLDEGVALVGGCCRTYAEDTLHMKHRLDD 407
+ G ++GGCC T E + M+ L++
Sbjct: 267 ARNCGAKIIGGCCGTMPEHLVAMRAALEN 295
>gi|295688705|ref|YP_003592398.1| homocysteine S-methyltransferase [Caulobacter segnis ATCC 21756]
gi|295430608|gb|ADG09780.1| homocysteine S-methyltransferase [Caulobacter segnis ATCC 21756]
Length = 358
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 149 RLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGAD 208
R ++P R IAGS+GP L S+ V+ + E +R ++ AL + G D
Sbjct: 124 RWNAENPERPKFIAGSIGPLNVMLSMSSDVNDPGARKVTFDQVYEAYRQQVDALYQGGVD 183
Query: 209 ILAIETIPASKEAQMLCRLLREW---PHQK--AWLSFSCKDDKHISNGESFT-QVARTCY 262
+ IETI + + + + +W H++ W+S + D +G + + Q A +
Sbjct: 184 LFLIETITDTLNCKAAIKAILDWRDEGHEELPIWISGTITD----RSGRTLSGQTAEAFW 239
Query: 263 N-MNPDQLIAVGVNCV--RPLMVSSLIEQLKTENIPLVVYPNSG 303
N + + AVG NC LM + E + + + YPN+G
Sbjct: 240 NSVKHAKPFAVGFNCALGADLMRPHIAEMARVADTLVAAYPNAG 283
>gi|365759548|gb|EHN01330.1| Mht1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 178
Score = 52.4 bits (124), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 28/145 (19%)
Query: 4 VKLIDGGFSSQLSTYVGDIIDGHPLWS-------SYFLATAKD--AVVQTHRDFIKAGAD 54
V ++DGG ++L +I G P+WS S++ ++ D V + +RDF+ AGA+
Sbjct: 17 VLVLDGGQGTELENRGINI--GGPVWSATPFTSDSFWEQSSHDREVVEEMYRDFMNAGAN 74
Query: 55 IVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARDIL 113
++MT +YQA+ E + S+Y + V + + I E+
Sbjct: 75 VLMTITYQANFKSISENTSIQTLSAYNGFLNRIVSFTRRIIGEES--------------Y 120
Query: 114 IAGSVGPYGASLRDGSEYRGDYVEH 138
+ GS+GP+ A + SEY G+Y H
Sbjct: 121 LVGSIGPWAAHV--SSEYTGNYGPH 143
>gi|359463590|ref|ZP_09252153.1| methionine synthase [Acaryochloris sp. CCMEE 5410]
Length = 1198
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 30 SSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDY 89
+ Y + T DAV HR+F+KAGAD++ T+++ A+ E+ DL D +Y+L K++ +
Sbjct: 46 NEYLIQTKPDAVATVHRNFLKAGADVIETDTFGATSIVLAEY-DL-ADRAYELNKAAAEL 103
Query: 90 VKEAIALEATHARIRSDDPARDILIAGSVGP 120
K+ A +T P + +AGS+GP
Sbjct: 104 AKQVTAEFST--------PEKPRFVAGSMGP 126
>gi|359438164|ref|ZP_09228202.1| homocysteine S-methyltransferase [Pseudoalteromonas sp. BSi20311]
gi|358027118|dbj|GAA64451.1| homocysteine S-methyltransferase [Pseudoalteromonas sp. BSi20311]
Length = 300
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M+ + ++DGG +L PLWS+ L A V Q H+ FI AGA+I+ NS
Sbjct: 1 MSKLTILDGGMGRELKRMGAPF--SQPLWSAQALIEAPQCVTQAHQAFINAGAEIITVNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E L YQ +++ IA EA + +++L+AGS+ P
Sbjct: 59 YACVPFHLGETL-------YQAQGATLAQQAAVIAKEA------AQKTKQNVLVAGSLPP 105
Query: 121 YGASLRDGSEYRGDYVE 137
S YR D+ +
Sbjct: 106 AFGS------YRADFFQ 116
>gi|254464728|ref|ZP_05078139.1| homocysteine S-methyltransferase [Rhodobacterales bacterium Y4I]
gi|206685636|gb|EDZ46118.1| homocysteine S-methyltransferase [Rhodobacterales bacterium Y4I]
Length = 340
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 114/319 (35%), Gaps = 65/319 (20%)
Query: 105 SDDPARDILIAGSVGPYGASLR-DGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAG 163
S D D+ + S G A L+ ++ R + ++ AE R + D R I +AG
Sbjct: 54 SVDAGSDLFLTNSFGGTAARLKLHNAQGRVRELNRIA----AELGREVADKAERKIAVAG 109
Query: 164 SVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQM 223
SVGP G + V +S A E + AL E GAD+L +ETI A +E
Sbjct: 110 SVGPTGEIF--------EPVGAMSHALAVEMFHEQADALKEGGADVLWLETISAPEE--- 158
Query: 224 LCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVS 283
+ A +F D SF RT + +
Sbjct: 159 ---------FRAAAEAFKLADMPWCGT-MSFDTAGRTMMGVTSADF-------------A 195
Query: 284 SLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN 343
L+E+ +N PL N G I + L F+ +
Sbjct: 196 QLVEEF--DNAPLAFGANCGTGASDI---------------------LRTVLGFAAQGTE 232
Query: 344 IPLVVYPNSG-ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMK 402
P++ N+G +Y V+ E + +Y D G ++GGCC T + HM+
Sbjct: 233 RPIISKGNAGIPKY--VDGHIHYDGTPELMGEYAVMARDAGAKIIGGCCGTMPDHLRHMR 290
Query: 403 HRLDDWVSGLSTYVGDIID 421
LD G + I++
Sbjct: 291 AALDSRPRGGRPALEQIVE 309
>gi|409386968|ref|ZP_11239285.1| 5-methyltetrahydrofolate--homocysteinemethyltransferase
[Lactococcus raffinolactis 4877]
gi|399205846|emb|CCK20200.1| 5-methyltetrahydrofolate--homocysteinemethyltransferase
[Lactococcus raffinolactis 4877]
Length = 793
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 141/406 (34%), Gaps = 137/406 (33%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
+ L DG +QL +G I G P +F T + V HRD++ AG+D++ N++Q
Sbjct: 10 QILLFDGAMGTQLQD-IGLPIGGIP---EHFNLTHPEVVEAIHRDYVAAGSDVITANTFQ 65
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ K + D + E I H I A +A +GP G
Sbjct: 66 ANT-----------------TKMAADELDETI-----HTAIALAKKAEPKYVAYDMGPTG 103
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
L+ P G D + Y
Sbjct: 104 QLLQ----------------------------------------PMGTLSFDAA-----Y 118
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
S+A +AE +AGAD++ IET+ EA++ ++E +++ +
Sbjct: 119 EMFASQAIIAE----------QAGADLVIIETVADLLEAKIAVLAVKENTKLPVFVTMTY 168
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQ-LKTENIPLVVYP 300
++D G T N+ D L GVNC + P ++ ++ + L IP++V
Sbjct: 169 QEDGRTFVGVDPQTATLTLQNLGVDVL---GVNCSLGPKELAPIVAKILDYAQIPVMVQA 225
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
N+G +P + + VY + E Y A
Sbjct: 226 NAG--------LPQMENGE---------------------------TVYKITPETYVA-- 248
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLD 406
Y L +GVA+VGGCC T E ++ +D
Sbjct: 249 --------------YTQKLLAQGVAVVGGCCGTTPEFIRQLRLLID 280
>gi|167524841|ref|XP_001746756.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775026|gb|EDQ88652.1| predicted protein [Monosiga brevicollis MX1]
Length = 1268
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 78/319 (24%)
Query: 4 VKLIDGGFSSQLST-------YVGDIIDGHPLW----SSYFLATAKDAVVQTHRDFIKAG 52
+ +DG + + T + G+ HP + + T D +V+ H+ +++AG
Sbjct: 30 IMFLDGAMGTLIQTLKLEEENFRGEEFKSHPKPLQGNNDVLVLTMPDDIVELHKRYLRAG 89
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
ADIV TN++ A++ DY +++++ E + +EA R+ D +I
Sbjct: 90 ADIVETNTFNANV-----ISQADY---------AMEHLVERLNIEAARVARRACD---EI 132
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
G G +Y +AG+VGP +L
Sbjct: 133 QAEGL----------GKKY-----------------------------VAGAVGPTNRTL 153
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI--PASKEAQMLC--RLL 228
+ +++ + + + +I+AL+E G DIL +ETI A+ +A + L+
Sbjct: 154 SISPSVEQPELRNITFPELVKAYSQQIRALIEGGVDILLVETIFDTANAKAALFAIDALV 213
Query: 229 RE-WPHQKAWLSFSCKD-DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL--MVSS 284
E +P +S + D +G++ + + NP +A+G+NC M
Sbjct: 214 EEGYPRLPLLISGTITDRSGRTLSGQTPDAFTVSVSHANP---LALGLNCALGAEDMRPH 270
Query: 285 LIEQLKTENIPLVVYPNSG 303
L E K + ++ YPN+G
Sbjct: 271 LEEIAKATDAYIICYPNAG 289
>gi|417947624|ref|ZP_12590775.1| Homocysteine S-methyltransferase family protein [Vibrio splendidus
ATCC 33789]
gi|342810662|gb|EGU45733.1| Homocysteine S-methyltransferase family protein [Vibrio splendidus
ATCC 33789]
Length = 301
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L PLWS+ L A D V Q H++F+ AGA+I++TNS
Sbjct: 1 MKTLTILDGGMGRELKEIGAPF--SQPLWSAQALIEAPDFVSQAHQNFVDAGAEIIITNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E +L ++L AL A+ +D + + +AGS+ P
Sbjct: 59 YACVPFHLGE--ELFAQRGFEL-----------AALSGELAKAIADQAPQAVKVAGSIPP 105
Query: 121 YGASLR 126
S R
Sbjct: 106 PFGSYR 111
>gi|294505992|ref|YP_003570050.1| vitamin B12-dependent methionine synthase family protein
[Salinibacter ruber M8]
gi|294342320|emb|CBH23098.1| Vitamin B12-dependent methionine synthase family protein
[Salinibacter ruber M8]
Length = 320
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 32/142 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHP-----LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
L+DGG +L I G P LWS+ L A D V + H ++++AGAD++ TN+
Sbjct: 14 LLDGGLGQEL------IRRGMPGTEPSLWSANALTEAPDLVQEVHEEYLRAGADVITTNT 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDP-ARDILIAGSVG 119
Y +L ++ +D EA+ EA R+ RD LIAGS+
Sbjct: 68 YAT--------------PPERLSEAGLDGRAEALNREAGRLAERARAAVGRDALIAGSLP 113
Query: 120 PYGASLRDGSEYRGDYVEHVSE 141
P S YR D V E
Sbjct: 114 PIRGS------YRPDLVGEAGE 129
>gi|83815362|ref|YP_444303.1| vitamin B12-dependent methionine synthase family protein
[Salinibacter ruber DSM 13855]
gi|83756756|gb|ABC44869.1| vitamin B12-dependent methionine synthase family protein
[Salinibacter ruber DSM 13855]
Length = 320
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 32/142 (22%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHP-----LWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
L+DGG +L I G P LWS+ L A D V + H ++++AGAD++ TN+
Sbjct: 14 LLDGGLGQEL------IRRGMPSTEPSLWSANALTEAPDLVQEVHEEYLRAGADVITTNT 67
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDP-ARDILIAGSVG 119
Y +L ++ +D EA+ EA R+ RD LIAGS+
Sbjct: 68 YAT--------------PPERLSEAGLDGRAEALNREAGRLAERARAAVGRDALIAGSLP 113
Query: 120 PYGASLRDGSEYRGDYVEHVSE 141
P S YR D V E
Sbjct: 114 PIRGS------YRPDLVGEAGE 129
>gi|90578002|ref|ZP_01233813.1| Homocysteine S-methyltransferase [Photobacterium angustum S14]
gi|90441088|gb|EAS66268.1| Homocysteine S-methyltransferase [Photobacterium angustum S14]
Length = 244
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M N+ ++DGG +L PLWS+ L + V Q H+ FI AGA I+ NS
Sbjct: 1 MVNLTILDGGMGRELKRIGAPF--SQPLWSAQALIESPQHVTQAHQGFIDAGAQIITVNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSD---DPARDILIAGS 117
Y E L Y ++ L A+I D + +L+AG+
Sbjct: 59 YACVPFHLGEEL----------------YAEQGRELAEKAAKIARDVVTASQKQVLVAGA 102
Query: 118 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYG 169
+ P S YR D E +S + E P DI +A +V G
Sbjct: 103 IPPIFGS------YRPDLFEEMSAYDITE-SLFEAQQPHVDIWLAETVASLG 147
>gi|401680207|ref|ZP_10812130.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
gi|400218822|gb|EJO49694.1| homocysteine S-methyltransferase [Veillonella sp. ACP1]
Length = 810
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 23/154 (14%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AGS+GP G L+ + ++S ++ + +R + +AL+E G D + IETI +E
Sbjct: 94 VAGSMGPTGRFLQP--------LGNMSFDSIYDTYREQAEALIEGGVDFIIIETIIDVQE 145
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA--------- 271
M LL ++A + K+D I SF++ RT P+
Sbjct: 146 --MRAALLASLDAREA--AGKTKEDVQIICQFSFSEDGRTITGTPPEVATTIVEAMGADI 201
Query: 272 VGVNC-VRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+G+NC + P ++ LIE++ + N+P++ PN+G
Sbjct: 202 IGINCSLGPEQITPLIEKIASVTNLPIICQPNAG 235
>gi|218675862|ref|YP_002394681.1| Homocysteine S-methyltransferase [Vibrio splendidus LGP32]
gi|218324130|emb|CAV25315.1| Homocysteine S-methyltransferase family protein [Vibrio splendidus
LGP32]
Length = 301
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L PLWS+ L A D V Q H++F+ AGA+I++TNS
Sbjct: 3 MKTLTILDGGMGRELKEIGAPF--SQPLWSAQALIEAPDFVSQAHQNFVDAGAEILITNS 60
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y E +L ++L AL A+ +D+ + I +AG++ P
Sbjct: 61 YACVPFHLGE--ELFEQRGFEL-----------AALSGELAKAVADNASHTIKVAGAIPP 107
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSV 165
S YR D + V EA DP D+ IA ++
Sbjct: 108 PFGS------YRPDLFK-VEEAAPIIQTLYDAQDPNIDLWIAETI 145
>gi|429760966|ref|ZP_19293413.1| putative 5-methyltetrahydrofolate--homocysteine methyltransferase
[Veillonella atypica KON]
gi|429176059|gb|EKY17464.1| putative 5-methyltetrahydrofolate--homocysteine methyltransferase
[Veillonella atypica KON]
Length = 813
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 23/154 (14%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AGS+GP G L+ + ++S ++ + +R + +AL+E G D + IETI +E
Sbjct: 97 VAGSMGPTGRFLQP--------LGNMSFDSIYDTYREQAEALIEGGVDFIIIETIIDVQE 148
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA--------- 271
M LL ++A + K+D I SF++ RT P+
Sbjct: 149 --MRAALLASLDAREA--AGKTKEDVQIICQFSFSEDGRTITGTPPEVATTIVEAMGADI 204
Query: 272 VGVNC-VRPLMVSSLIEQLKT-ENIPLVVYPNSG 303
+G+NC + P ++ LIE++ + N+P++ PN+G
Sbjct: 205 IGINCSLGPEQITPLIEKIASVTNLPIICQPNAG 238
>gi|126737535|ref|ZP_01753265.1| methionine synthase I [Roseobacter sp. SK209-2-6]
gi|126720928|gb|EBA17632.1| methionine synthase I [Roseobacter sp. SK209-2-6]
Length = 340
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 112/303 (36%), Gaps = 63/303 (20%)
Query: 105 SDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGS 164
S D D+ + S G A L+ + V +++A AE R + D R I +AGS
Sbjct: 54 SVDAGSDLFLTNSFGGTAARLKLHDAQK--RVRELNQAA-AELGREVADKSERKIAVAGS 110
Query: 165 VGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQML 224
VGP G + V ++ A E + +AL E GAD+L +ETI A +E
Sbjct: 111 VGPTGEIF--------EPVGPMTHALAVEMFHEQAEALKEGGADVLWLETISAPEE---- 158
Query: 225 CRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSS 284
+ A +F D SF RT + L +
Sbjct: 159 --------FRAAAEAFKLADMTWCGT-MSFDTAGRTMMGVTSADL-------------AQ 196
Query: 285 LIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
L+E+ +N P+ N G A + R + L F+ +
Sbjct: 197 LVEEF--DNAPVAFGANCGTG------------ASDILRTV---------LGFAAQGTER 233
Query: 345 PLVVYPNSG-ERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKH 403
P++ N+G +Y V+ E + +Y D G ++GGCC T E M+
Sbjct: 234 PIISKGNAGIPKY--VDGHIHYDGTPELMGEYAVMARDSGAKIIGGCCGTMPEHLSSMRE 291
Query: 404 RLD 406
LD
Sbjct: 292 ALD 294
>gi|411119114|ref|ZP_11391494.1| methionine synthase (B12-dependent) [Oscillatoriales cyanobacterium
JSC-12]
gi|410710977|gb|EKQ68484.1| methionine synthase (B12-dependent) [Oscillatoriales cyanobacterium
JSC-12]
Length = 1242
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 30 SSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDY 89
+ Y + T +AV + HRDF+ AGAD++ TN++ A+ E+ +L D +Y+L K++ +
Sbjct: 46 NEYLIFTKPEAVAKVHRDFLAAGADVIETNTFGATSIVLAEY-NL-ADQAYELNKAAAEL 103
Query: 90 VKEAIALEATHARIRSDDPARDILIAGSVGP 120
K+ A +T + R +AGS+GP
Sbjct: 104 AKQVTAEFSTSEKPR--------FVAGSIGP 126
>gi|378764382|ref|YP_005192998.1| predicted MHT1, Homocysteine/selenocysteine methylase
[Sinorhizobium fredii HH103]
gi|365184010|emb|CCF00859.1| predicted MHT1, Homocysteine/selenocysteine methylase
[Sinorhizobium fredii HH103]
Length = 302
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M ++++DGG S +L ++ P WS+ L + + V Q HR+FI AGAD++ TNS
Sbjct: 1 MNQLRILDGGMSRELIRLGAELR--QPEWSALALMESPEIVGQVHREFIDAGADVITTNS 58
Query: 61 YQA---SIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGS 117
Y IG ++ ++ S+ + +A EA R+ R +L+AGS
Sbjct: 59 YALVPFHIG----------EARFRSEGRSLIGLAGKLAREAADQRVD-----RKVLVAGS 103
Query: 118 VGP 120
+ P
Sbjct: 104 LPP 106
>gi|354613024|ref|ZP_09030959.1| homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
gi|353222612|gb|EHB86914.1| homocysteine S-methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
Length = 305
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 88/249 (35%), Gaps = 63/249 (25%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AGSVGP YR D V E + E HR L AG D++ +ET+ +E
Sbjct: 108 VAGSVGPAA------DAYRPDLVPEDDE--LREEHRWLAVELSRAGVDLVLVETMNTVRE 159
Query: 221 AQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280
A + + W+SF C DD + +GE R + L GVNC P
Sbjct: 160 AAIATEEVLA-AGLDPWVSFVCGDDSRLLSGEPVAAAGRAVAALGATVL---GVNCTAPA 215
Query: 281 MVSSLIEQLK-TENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339
+ L+ + L+ PN + + +C
Sbjct: 216 RTGPALRTLREVHDGALLAQPNVEDR------------------------------TGTC 245
Query: 340 KTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAEDT 398
+P+ V P E + V DW DE G+A VGGCC + AE
Sbjct: 246 ADGPLPVAVGP-------------------EELADAVADWHDEVGLAAVGGCCGSTAEHV 286
Query: 399 LHMKHRLDD 407
+ R D
Sbjct: 287 AALAARFTD 295
>gi|86144722|ref|ZP_01063054.1| homocysteine S-methyltransferase family protein [Vibrio sp. MED222]
gi|85837621|gb|EAQ55733.1| homocysteine S-methyltransferase family protein [Vibrio sp. MED222]
Length = 299
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M + ++DGG +L PLWS+ L A D V Q H++F+ AGA+I++TNS
Sbjct: 1 MKTLTILDGGMGRELKEIGAPF--SQPLWSAQALIEAPDFVSQAHQNFVDAGAEILITNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y + + +L K + E L A+ +D+ + +AG++ P
Sbjct: 59 YAC----------VPFHLGEELFKQQGFELAE---LSGELAKAVADNAPHTVKVAGAIPP 105
Query: 121 YGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSV 165
S YR D + V EA DP D+ IA ++
Sbjct: 106 PFGS------YRPDLFK-VEEAAPIIQTLYDAQDPNIDLWIAETI 143
>gi|332535859|ref|ZP_08411584.1| homocysteine S-methyltransferase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332034752|gb|EGI71294.1| homocysteine S-methyltransferase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 301
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 1 MANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNS 60
M V ++DGG +L PLWS+ L A V Q H+ FI AGA+I+ NS
Sbjct: 1 MKKVTILDGGMGRELKRIGAPF--SQPLWSAQALIEAPHFVAQAHQGFIDAGAEIITVNS 58
Query: 61 YQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGP 120
Y + + + +S + E AL A A +++ +++L+AGS+ P
Sbjct: 59 YAC----------VPFHLGEERYESQGALLAEQAALIANKA---ANNAKQNVLVAGSLPP 105
Query: 121 YGASLR 126
S R
Sbjct: 106 AFGSYR 111
>gi|323336516|gb|EGA77782.1| Mht1p [Saccharomyces cerevisiae Vin13]
Length = 185
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 62/210 (29%)
Query: 208 DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNM 264
D++ ETIP E + + + + ++ S D+ + +G + +++ + N
Sbjct: 28 DLIGFETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNK 87
Query: 265 NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324
L+ +GVNCV S+LI ++ E++P
Sbjct: 88 INKNLLLMGVNCVS-FNQSALILKMLHEHLP----------------------------- 117
Query: 325 LREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKY------VTD 378
+PL+VYPNSGE Y+ W P +K V
Sbjct: 118 ------------------GMPLLVYPNSGEIYNPKEKTW-----HRPTNKLDDWETTVKK 154
Query: 379 WLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408
++D G ++GGCCRT +D + +D +
Sbjct: 155 FVDNGARIIGGCCRTSPKDIAEIASAVDKY 184
>gi|162456917|ref|YP_001619284.1| bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase [Sorangium cellulosum So ce56]
gi|161167499|emb|CAN98804.1| Methylenetetrahydrofolate reductase family protein [Sorangium
cellulosum So ce56]
Length = 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 149 RLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGAD 208
RL + D +AGS+GP G L G R D + AT AE + AL E GAD
Sbjct: 99 RLAREIAGGDAYVAGSIGPTG--LVPGVATRDDLA--AASATFAE----QAGALAEGGAD 150
Query: 209 ILAIETIPASKEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD 267
+L +ET E ++ R P S + ++G +VART + +
Sbjct: 151 LLILETFRHLDEIKLAIDAARSAAPGLPVLASMTFDTSGVAADGSEPERVARTLRDWGVE 210
Query: 268 QLIAVGVNCV-RPLMVSSLIEQLKTENIPLVVYPNSG 303
L GVNC P + ++ E++ T +PL V PN+G
Sbjct: 211 LL---GVNCGDGPQLSLAMAERMATAGLPLCVQPNAG 244
>gi|149203548|ref|ZP_01880518.1| homocysteine S-methyltransferase family protein [Roseovarius sp.
TM1035]
gi|149143381|gb|EDM31420.1| homocysteine S-methyltransferase family protein [Roseovarius sp.
TM1035]
Length = 298
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 62/250 (24%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKE 220
+AG++GP S YR D SEA A + + AL++ D++ +ET+ + +
Sbjct: 98 VAGAIGPLVQS------YRPDLCPPASEA--AALYAENV-ALLKDRVDLILLETMSSVDQ 148
Query: 221 AQ--MLCRLLREWPHQKAWLSFSCKDD--KHISNGESFTQVARTCYNMNPDQLIAVGVNC 276
A+ ++ L P WL + DD + +GE+ +A P+ AV +NC
Sbjct: 149 ARGGLMAAGLSGLP---VWLGVTVMDDDGTRLRSGEALGDLAALVAEFGPE---AVLINC 202
Query: 277 VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLS 336
RP V++ +E +K +P Y N
Sbjct: 203 TRPESVAAGLEIVKGFGLPFGAYAN----------------------------------G 228
Query: 337 FSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPV-DKYVTDWLDEGVALVGGCCRTYA 395
F+C + + + DA+ R DL ++ W+D+G ++VGGCC
Sbjct: 229 FTCISAG-----FLGAAPTVDALEQR---HDLTPAAYAEFAMGWVDQGASIVGGCCEVGP 280
Query: 396 EDTLHMKHRL 405
+ RL
Sbjct: 281 AHIEELARRL 290
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,103,494,026
Number of Sequences: 23463169
Number of extensions: 441144706
Number of successful extensions: 995315
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 1014
Number of HSP's that attempted gapping in prelim test: 981753
Number of HSP's gapped (non-prelim): 9813
length of query: 591
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 443
effective length of database: 8,886,646,355
effective search space: 3936784335265
effective search space used: 3936784335265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)