BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17603
(591 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q47690|MMUM_ECOLI Homocysteine S-methyltransferase OS=Escherichia coli (strain K12)
GN=mmuM PE=1 SV=2
Length = 310
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 175/404 (43%), Gaps = 111/404 (27%)
Query: 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQ 62
++ L+DG +++L ++ D LWS+ L + + + H D+ +AGA +T SYQ
Sbjct: 15 DILLLDGAMATELEARGCNLADS--LWSAKVLVENPELIREVHLDYYRAGAQCAITASYQ 72
Query: 63 ASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYG 122
A+ GF LD S LI SV+ ++A
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKA----------------------------- 102
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
EA +AE + A +L+AGSVGPYGA L DGSEYRGDY
Sbjct: 103 -----------------REAYLAE------NPQAGTLLVAGSVGPYGAYLADGSEYRGDY 139
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242
H S +HRPR++AL++AGAD+LA ET+P E + L LL +P +AW SF+
Sbjct: 140 --HCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTL 197
Query: 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PLVVYPN 301
+D +H+S+G V Q++A+G+NC+ ++ ++ L + PLVVYPN
Sbjct: 198 RDSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPN 255
Query: 302 SGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
SGEH YDAV+
Sbjct: 256 SGEH--------------------------------------------------YDAVSK 265
Query: 362 RWIDR-DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + C + Y+ W G L+GGCCRT D +K R
Sbjct: 266 TWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVYPNS 568
D +H+S+G V Q++A+G+NC+ + ++ L + PLVVYPNS
Sbjct: 199 DSEHLSDGTPLRDVVALLAGY--PQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNS 256
Query: 569 GERYD 573
GE YD
Sbjct: 257 GEHYD 261
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 470 CEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
C + Y+ W G L+GGCCRT D +K R
Sbjct: 274 CAQLADYLPQWQAAGARLIGGCCRTTPADIAALKAR 309
>sp|O31463|HMT_BACSU Homocysteine S-methyltransferase YbgG OS=Bacillus subtilis (strain
168) GN=ybgG PE=4 SV=1
Length = 315
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 182/410 (44%), Gaps = 111/410 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DG +++L ++ D LWS+ L + + Q H D+ AGAD +T SYQ++
Sbjct: 15 VLDGAMATELERKGCNLNDS--LWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTF 72
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF L + +LI+ SV EA
Sbjct: 73 EGFAA-RGLSEAEARRLIELSVSIAAEA-------------------------------- 99
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
RD E E +RL P +IA S+GPYGA L DGSEYRG+Y
Sbjct: 100 RD-------------EFWSLEENRLNRPKP----IIAASIGPYGAYLADGSEYRGNYA-- 140
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD 245
+SE + E+HRPR++AL+EAGAD+LA ETIP EA+ + RLL+E+P AW+SFS KD
Sbjct: 141 ISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDG 200
Query: 246 KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE-NIPLVVYPNSGE 304
HIS+G A + Q+ A+G+NC + SLIE+LK + P++VYPNSGE
Sbjct: 201 LHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGE 258
Query: 305 HILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWI 364
P K W +C E Y A +AR
Sbjct: 259 QYD---------------------PETKTWNGAAC-------------AESYGA-SAR-- 281
Query: 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLST 414
W ++G L+GGCCRT E+ + W L T
Sbjct: 282 -------------TWHEKGARLIGGCCRTKPENI----QEIAAWARSLKT 314
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTE-NIPLVVYPNS 568
D HIS+G A + Q+ A+G+NC + LIE+LK + P++VYPNS
Sbjct: 199 DGLHISDGTPAADCAS--WLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNS 256
Query: 569 GERYD 573
GE+YD
Sbjct: 257 GEQYD 261
>sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3
PE=1 SV=2
Length = 347
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 184/416 (44%), Gaps = 107/416 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF+++L + DI D PLWS+ L T+ V + H D++++GA+I++T SYQA+I
Sbjct: 25 VVDGGFATELQRHGADIND--PLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + L++ SV+ EA R+I
Sbjct: 83 QGFVA-KGLSVGEAENLLRRSVEITYEA----------------REIF------------ 113
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARD-ILIAGSVGPYGASLRDGSEYRGDYVE 184
+ T W +R IL+A SVG YGA L DGSEY G Y +
Sbjct: 114 -------------YNRCTKGSWDFAYAGKASRRPILVAASVGSYGAYLADGSEYSGIYGD 160
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCK 243
VS+ T+ ++HR R+Q L ++GAD++A ETIP EA+ LL E AW SF+ K
Sbjct: 161 SVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSK 220
Query: 244 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLK-TENIPLVVY 299
D + G+S + VA +C N ++A+G+NC P + +LI L+ P+VVY
Sbjct: 221 DGVSVPRGDSVVECAKVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVVY 275
Query: 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359
PNSGE YD +
Sbjct: 276 PNSGE--------------------------------------------------VYDGL 285
Query: 360 NARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLS 413
N +WI + D YV+ W D G +L GGCCRT + L D S S
Sbjct: 286 NKKWIKSEGESEEDFVSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDEPSAAS 341
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 522 QVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYD 573
+VA +C N ++A+G+NC P + LI L+ P+VVYPNSGE YD
Sbjct: 236 KVADSCKN-----VVAIGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYD 283
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 508
YV+ W D G +L GGCCRT + L D
Sbjct: 303 YVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSD 335
>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1
PE=1 SV=1
Length = 326
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 174/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGADIV+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV+ EA
Sbjct: 80 PGFLS-RGLSIEESESLLQKSVELAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + E VS+ + ++R L+A S+G YGA L DGSEY G Y E+
Sbjct: 107 ------RDRFWEKVSKVSGHSYNR---------ALVAASIGSYGAYLADGSEYSGHYGEN 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR R+Q LVEAG D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ +GESF + N + AVG+NC P + +LI + K +VVYPNSG
Sbjct: 212 GEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRKFAKLTKKAIVVYPNSG 269
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C ++
Sbjct: 270 EV----------------------WDGKAKQWLPSQCFGDD------------------- 288
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ + T W D G L+GGCCRT
Sbjct: 289 --------EFEMFATKWRDLGAKLIGGCCRT 311
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D + +GESF + N + AVG+NC P + LI + K +VVYPNS
Sbjct: 211 DGEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRKFAKLTKKAIVVYPNS 268
Query: 569 GERYD 573
GE +D
Sbjct: 269 GEVWD 273
>sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2
PE=1 SV=1
Length = 333
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 179/407 (43%), Gaps = 107/407 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++ + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 21 VIDGGLATEFERHGADLND--PLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATI 78
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+K SV+ EA
Sbjct: 79 QGF-EAKGFSREESESLLKKSVEIATEA-------------------------------- 105
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + ++ + L R IL+A SVG YGA L DGSEY G Y +
Sbjct: 106 ------RNSYYDKCGTSSSMDDKIL----KKRPILVAASVGSYGAYLADGSEYSGIYGDS 155
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L E+GAD++A ETIP EAQ LL E + W SF+ KD
Sbjct: 156 ITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKD 215
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
++ +G+S + +A C ++++AVG+NC P + L+ ++ K + P++VYP
Sbjct: 216 GVNVVSGDSIKECISIAENC-----EKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYP 270
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE YDA
Sbjct: 271 NSGES--------------------------------------------------YDADR 280
Query: 361 ARWIDRDLC--EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
W++ E YV W+D GV+L+GGCCRT + RL
Sbjct: 281 KEWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 327
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 531 NPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYDFHLADEK 580
N ++++AVG+NC P + L+ ++ K + P++VYPNSGE YD AD K
Sbjct: 234 NCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYD---ADRK 281
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 506
YV W+D GV+L+GGCCRT + RL
Sbjct: 297 YVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 327
>sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1
Length = 339
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 183/406 (45%), Gaps = 113/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV+ IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVE-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + +L+A S+G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPVLVAASLGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EA+ LL E + AW SF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEAYVELLEECNINIPAWFSFNSKD 214
Query: 245 DKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
HI +G+S T +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHIVSGDSLIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W++ D YV +W +G L+GGCCRT +T+ HR
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAVLIGGCCRT-TPNTIRAIHR 324
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESF---TQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D HI +G+S T +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHIVSGDSLIECTTIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHR 505
YV +W +G L+GGCCRT +T+ HR
Sbjct: 296 YVNEWCKDGAVLIGGCCRT-TPNTIRAIHR 324
>sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1
Length = 338
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 184/406 (45%), Gaps = 113/406 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG +++L D+ D PLWS+ L ++ + + H D+++AGA+I++T SYQA+I
Sbjct: 25 VLDGGLATELEANGADLND--PLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATI 82
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L+ SV IALEA R++ +
Sbjct: 83 QGF-ESKGFSKEQSENLLTKSVQ-----IALEA-----------REMFLK---------- 115
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
EH+ ++T + IL+A ++G YGA L DGSEY GDY E
Sbjct: 116 -----------EHLEKSTPIQ----------HPILVAAALGSYGAYLADGSEYSGDYGEA 154
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD 244
++ + ++HR R+Q L EAG D++A ETIP EAQ LL E + +WLSF+ KD
Sbjct: 155 GTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKD 214
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYP 300
H+ +G+S + +A C + AVG+NC P + LI + K + P+++YP
Sbjct: 215 GVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKPILIYP 269
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE RYD
Sbjct: 270 NSGE--------------------------------------------------RYDGEK 279
Query: 361 ARWIDRDLCEPVD--KYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W++ D YV +W +G AL+GGCCRT +T+ HR
Sbjct: 280 KEWVESTGVSDGDFVSYVNEWCKDGAALIGGCCRT-TPNTIRAIHR 324
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 506 LDDWDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIP 561
+ D H+ +G+S + +A C + AVG+NC P + LI + K + P
Sbjct: 210 FNSKDGVHVVSGDSLIECATIADKCAKVG-----AVGINCTPPRFIHGLILSIRKVTDKP 264
Query: 562 LVVYPNSGERYD 573
+++YPNSGERYD
Sbjct: 265 ILIYPNSGERYD 276
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 476 YVTDWLDEGVALVGGCCRTYAEDTLHMKHR-LDDWDDKH 513
YV +W +G AL+GGCCRT +T+ HR L+ KH
Sbjct: 296 YVNEWCKDGAALIGGCCRT-TPNTIRAIHRTLNQGCHKH 333
>sp|Q4VNK0|SMTA_BRAOT Selenocysteine Se-methyltransferase OS=Brassica oleracea var.
italica GN=SMT PE=1 SV=1
Length = 346
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 182/405 (44%), Gaps = 105/405 (25%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGG +++L + D+ D PLWS+ L T+ + H D+++AGADI+ + SYQA+I
Sbjct: 26 IIDGGLATELERHGADLND--PLWSAKCLLTSPHLIHTVHLDYLEAGADIISSASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF E + S L++ SV+ IA EA
Sbjct: 84 QGF-EAKGYSIEKSESLLRKSVE-----IACEA--------------------------- 110
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R Y + + R IL+A SVG YGA L DGSEY G Y +
Sbjct: 111 ------RSTYYDKCKDDDDK------KILKKRPILVAASVGSYGAFLADGSEYSGIYGDL 158
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ T+ ++HR R+Q L E+GADI+A ETIP EAQ LL E + W SF+ KD
Sbjct: 159 ITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFSFNSKD 218
Query: 245 DKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLI-EQLKTENIPLVVYP 300
++ +G+S + +A C ++++AVG+NC P + L+ E K + P++VYP
Sbjct: 219 GVNVVSGDSIKECIAIAEAC-----EKVVAVGINCTPPRFIEGLVLEIAKVTSKPILVYP 273
Query: 301 NSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN 360
NSGE R P +K W+ E N
Sbjct: 274 NSGE---------------------RYDPERKEWV------------------ENTGVGN 294
Query: 361 ARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
++ YV W+D GV+L+GGCCRT + RL
Sbjct: 295 EDFVS---------YVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 330
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 21/99 (21%)
Query: 479 DWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQ---VARTCYNMNPDQL 535
+ LDEGVA + G + D ++ +G+S + +A C +++
Sbjct: 199 ELLDEGVAKIPGW------------FSFNSKDGVNVVSGDSIKECIAIAEAC-----EKV 241
Query: 536 IAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNSGERYD 573
+AVG+NC P + L+ ++ K + P++VYPNSGERYD
Sbjct: 242 VAVGINCTPPRFIEGLVLEIAKVTSKPILVYPNSGERYD 280
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 73/210 (34%), Gaps = 54/210 (25%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERY 356
V SG I+A ETIP EAQ LL E + W SF+ K
Sbjct: 174 VLAESGADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFSFNSK---------------- 217
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYV 416
D VN D + E +A+ C + A R ++ GL +
Sbjct: 218 DGVNV-------------VSGDSIKECIAIAEACEKVVAVGINCTPPR---FIEGLVLEI 261
Query: 417 GDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKY 476
+ T+K +V + + +++ + N E Y
Sbjct: 262 AKV-------------TSKPILVYPNSGERYDPERKEWVENTGVGN--------EDFVSY 300
Query: 477 VTDWLDEGVALVGGCCRTYAEDTLHMKHRL 506
V W+D GV+L+GGCCRT + RL
Sbjct: 301 VEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 330
>sp|A4ZGQ8|HMT1_BRAOT Homocysteine S-methyltransferase 1 OS=Brassica oleracea var.
italica GN=HMT1 PE=1 SV=1
Length = 326
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 174/391 (44%), Gaps = 104/391 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGGF++QL + I D PLWS+ L + + + H ++++AGAD+V+T+SYQA+I
Sbjct: 22 VVDGGFATQLEIHGAAIND--PLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQATI 79
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ L + S L++ SV EA
Sbjct: 80 PGFLS-RGLSMEESESLLQKSVKLAVEA-------------------------------- 106
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
R + + VS+ + ++R L+A S+G YGA L DGSEY G Y E
Sbjct: 107 ------RDRFWDKVSKTSGHSYNR---------ALVAASIGSYGAYLADGSEYSGSYGED 151
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
VS + ++HR RIQ LVEA D+LA ETIP EAQ LL E Q AW+ F+ D
Sbjct: 152 VSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLEEENVQIPAWICFTSVD 211
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
++ +GESF + T N + AVG+NC P + +LI + K +VVYPNSG
Sbjct: 212 GENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLIRKFSKLTQKAIVVYPNSG 269
Query: 304 EHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNAR 362
E W + K WL C
Sbjct: 270 EV----------------------WDGKAKKWLPSQC----------------------- 284
Query: 363 WIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
+ D + + + T W D G L+GGCCRT
Sbjct: 285 FGDAEF----EMFATKWRDLGAKLIGGCCRT 311
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQL-KTENIPLVVYPNS 568
D ++ +GESF + T N + AVG+NC P + LI + K +VVYPNS
Sbjct: 211 DGENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLIRKFSKLTQKAIVVYPNS 268
Query: 569 GERYD 573
GE +D
Sbjct: 269 GEVWD 273
>sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA
PE=1 SV=1
Length = 338
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 190/409 (46%), Gaps = 109/409 (26%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+I GG ++L + D+ D PLWS+ L + + Q H D+++ GADI++T SYQA+I
Sbjct: 18 VIAGGLGTELQRHGADLND--PLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATI 75
Query: 66 GGFME--FLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGA 123
GF F D + ++ L++ SV+ +EA RD+
Sbjct: 76 QGFKAKGFSDEEGEA---LLRRSVEIAREA----------------RDL----------- 105
Query: 124 SLRDGSEYRGDYVEHVSEATM--AEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGD 181
Y + +E++ + R++ P ILIAGSVG YGA L DGSE+ G+
Sbjct: 106 -----------YYQRCAESSSDNGDDSRILKQRP---ILIAGSVGSYGAYLADGSEFSGN 151
Query: 182 YVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP-HQKAWLSF 240
Y + + T+ ++HR ++Q L ++G D+LA E +P EAQ LL E AW +F
Sbjct: 152 YGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAF 211
Query: 241 SCKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENI-PL 296
+ KD ++ +G+S + +A +C D+++AVG+NC P + LI LK P+
Sbjct: 212 TSKDGNNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPI 266
Query: 297 VVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERY 356
V+YPNSGE AI +EW
Sbjct: 267 VIYPNSGETYDAIR---------------KEWGQ-------------------------- 285
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405
N+ D D VDK W + G +LVGGCCRT DT+ +++
Sbjct: 286 ---NSGVTDEDFVSYVDK----WCESGASLVGGCCRT-TPDTIRGIYKI 326
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 510 DDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSPLIEQLKTENI-PLVVY 565
D ++ +G+S + +A +C D+++AVG+NC P + LI LK P+V+Y
Sbjct: 215 DGNNVVSGDSIEECGSIAESC-----DKVVAVGINCTPPRFIHDLILLLKKVTAKPIVIY 269
Query: 566 PNSGERYD 573
PNSGE YD
Sbjct: 270 PNSGETYD 277
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 88/232 (37%), Gaps = 68/232 (29%)
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPN-QKAWLSFSCKTENIPLVVYPNSGERY 356
+ +SG +LA E +P EAQ LL E AW +F+ K N VV +S E
Sbjct: 171 ILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAFTSKDGNN--VVSGDSIEEC 228
Query: 357 DAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR--TYAEDTLHMKHRLDDWVSGLST 414
++ E DK V VG C + D + + ++
Sbjct: 229 GSI---------AESCDKVVA---------VGINCTPPRFIHDLILLLKKV--------- 261
Query: 415 YVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWI-DRDLCEPV 473
TAK V+ + +T D +R N + D D V
Sbjct: 262 ------------------TAKPIVI-----YPNSGETYDAIRKEWGQNSGVTDEDFVSYV 298
Query: 474 DKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVAR 525
DK W + G +LVGGCCRT DT+ +++ +S+G+S T A+
Sbjct: 299 DK----WCESGASLVGGCCRT-TPDTIRGIYKI-------LSSGQSPTFSAK 338
>sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1
Length = 342
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 171/399 (42%), Gaps = 119/399 (29%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
++DGG ++L + D+ D LWS+ LA+A + + H D+++AGAD++++ SYQA+I
Sbjct: 26 VVDGGLGTELEAHGADLHDA--LWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATI 83
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSVGPYG 122
GF D S +L++ SV +EA A E + R PA
Sbjct: 84 EGFQS-RGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPA------------- 129
Query: 123 ASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
L+A SVG YGA DGSEY GDY
Sbjct: 130 -------------------------------------LVAASVGSYGAYRADGSEYSGDY 152
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFS 241
+ +++ + +HR R+Q L AG D++A ETIP EAQ+ LL E + AW SF+
Sbjct: 153 GKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLEENGIRIPAWFSFT 212
Query: 242 CKDDKHISNGESFTQ---VARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLV 297
KD + ++G+ + VA +C ++ AVGVNC P + LI + K + P+V
Sbjct: 213 SKDGVNAASGDPINECAAVADSCPRVD-----AVGVNCTAPRFIHGLILSIKKVTSKPIV 267
Query: 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYD 357
VYPNSGE Y
Sbjct: 268 VYPNSGET--------------------------------------------------YV 277
Query: 358 AVNARWIDRDLCEPVDKYVT---DWLDEGVALVGGCCRT 393
A W+D D D +V+ +W G AL+GGCCRT
Sbjct: 278 AETNEWVDSDGATGTDDFVSRVGEWRRAGAALIGGCCRT 316
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 116/307 (37%), Gaps = 72/307 (23%)
Query: 203 VEAGADILAIETIPASKE---AQMLCR-----LLREWPH--QKAWLSFSCKDDKHISNGE 252
+EAGAD++ + A+ E ++ R LLR H Q+A F+ + D+ G
Sbjct: 67 LEAGADVIISASYQATIEGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGR 126
Query: 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKT-ENIPLVVYPNSGEHILAIET 311
VA + + + A G S E LK L V +G ++A ET
Sbjct: 127 PPALVAASVGSYGAYR--ADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFET 184
Query: 312 IPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCE 370
IP EAQ+ LL E + AW SF+ K D VNA
Sbjct: 185 IPNKLEAQVYAELLEENGIRIPAWFSFTSK----------------DGVNA--------- 219
Query: 371 PVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYF 430
D ++E A+ C R D + + ++ GL + +
Sbjct: 220 ----ASGDPINECAAVADSCPRV---DAVGVNCTAPRFIHGLILSIKKV----------- 261
Query: 431 LATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVT---DWLDEGVAL 487
T+K VV + ++TN+ W+D D D +V+ +W G AL
Sbjct: 262 --TSKPIVVYPNSGETYVAETNE----------WVDSDGATGTDDFVSRVGEWRRAGAAL 309
Query: 488 VGGCCRT 494
+GGCCRT
Sbjct: 310 IGGCCRT 316
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 537 AVGVNCVRPLMVSPLIEQLK-TENIPLVVYPNSGERYDFHLADEKNNCVKSD 587
AVGVNC P + LI +K + P+VVYPNSGE Y E N V SD
Sbjct: 240 AVGVNCTAPRFIHGLILSIKKVTSKPIVVYPNSGETY----VAETNEWVDSD 287
>sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1
Length = 323
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 106/392 (27%)
Query: 6 LIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASI 65
+IDGGF++QL DI D PLWS+ L T V + H +++AGAD+++++SYQA+I
Sbjct: 16 VIDGGFATQLEALGADIND--PLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATI 73
Query: 66 GGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASL 125
GF+ AR S A D+L S+
Sbjct: 74 PGFI-------------------------------ARGMSVAEAEDLL--------RTSV 94
Query: 126 RDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEH 185
+ +E R ++ + + ++R L+A S+G YGA L DGSEY G Y
Sbjct: 95 KLANEARDEFWKSTLRKSKPIYNR---------ALVAASIGSYGAYLADGSEYSGSYGAD 145
Query: 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ-KAWLSFSCKD 244
++ + ++HR R+Q L AG D++A E IP EAQ L LL E Q +W+ FS D
Sbjct: 146 ITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEEEKVQIPSWICFSSVD 205
Query: 245 DKHISNGESFTQVARTCYNMNPDQLIA-VGVNCVRPLMVSSLI-EQLKTENIPLVVYPNS 302
K++ +GESF + +N + +A VGVNC P + +I E K + VYPNS
Sbjct: 206 GKNLCSGESFADCLKI---LNASEKVAVVGVNCTPPQFIEGIICEFRKQTKKAIAVYPNS 262
Query: 303 GEHILAIETIPASKEAQMLCRLLREWPNQ-KAWLSFSCKTENIPLVVYPNSGERYDAVNA 361
GE W + K WL C + +DA+
Sbjct: 263 GEV----------------------WDGRAKRWLPVECLGH-----------KSFDALAK 289
Query: 362 RWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT 393
R W + G +L+GGCCRT
Sbjct: 290 R----------------WQEAGASLIGGCCRT 305
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 510 DDKHISNGESFTQVARTCYNMNPDQLIAV-GVNCVRPLMVSPLI-EQLKTENIPLVVYPN 567
D K++ +GESF + +N + +AV GVNC P + +I E K + VYPN
Sbjct: 205 DGKNLCSGESFADCLKI---LNASEKVAVVGVNCTPPQFIEGIICEFRKQTKKAIAVYPN 261
Query: 568 SGERYD 573
SGE +D
Sbjct: 262 SGEVWD 267
>sp|Q12525|MHT1_YEAST Homocysteine S-methyltransferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MHT1 PE=1 SV=1
Length = 324
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 132/424 (31%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATA---------KDAVVQTHRDFIKAG 52
V ++DGG ++L +I P+WS+ + + V + +RDF+ AG
Sbjct: 15 GKVLILDGGQGTELENRGINI--NSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAG 72
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQ-LIKSSVDYVKEAIALEATHARIRSDDPARD 111
A+I+MT +YQA+ E + ++Y+ + V + +E I E
Sbjct: 73 ANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEER------------- 119
Query: 112 ILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGAS 171
+ GS+GP+ A + EY GDY GP+ +
Sbjct: 120 -YLIGSIGPWAAHV--SCEYTGDY------------------------------GPHPEN 146
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVE-AGADILAIETIPASKEAQMLCRLLRE 230
+ +Y G + +P+++ + D++ ETIP E + + +
Sbjct: 147 I----DYYG-------------FFKPQLENFNQNRDIDLIGFETIPNFHELKAILSWDED 189
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVA---RTCYNMNPDQLIAVGVNCVRPLMVSSLIE 287
+ ++ S D+ + +G + +++ + N L+ +GVNCV S+LI
Sbjct: 190 IISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS-FNQSALIL 248
Query: 288 QLKTENI---PLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI 344
++ E++ PL+VYPNSGE P +K W + K ++
Sbjct: 249 KMLHEHLPGMPLLVYPNSGEIYN---------------------PKEKTWHRPTNKLDD- 286
Query: 345 PLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404
W + V ++D G ++GGCCRT +D +
Sbjct: 287 ------------------W---------ETTVKKFVDNGARIIGGCCRTSPKDIAEIASA 319
Query: 405 LDDW 408
+D +
Sbjct: 320 VDKY 323
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 534 QLIAVGVNCVRPLMVSPLIEQLKTENIP---LVVYPNSGERYD 573
L+ +GVNCV S LI ++ E++P L+VYPNSGE Y+
Sbjct: 230 NLLLMGVNCVS-FNQSALILKMLHEHLPGMPLLVYPNSGEIYN 271
>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM4 PE=1 SV=1
Length = 325
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 122 GASLRDGSEYRGDY---VEHVSEATMAEWHRLITD--DPARDIL-----IAGSVGPYGAS 171
GA + + Y+ Y E+ T++E++ L+ D +R+ + + G +GP+GA
Sbjct: 73 GAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGCIGPWGAH 132
Query: 172 LRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA-DILAIETIPASKEAQMLCRLLRE 230
+ E+ GDY ++ +P+++ + D++ ETIP E + +
Sbjct: 133 I--CREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELKAILSWDES 190
Query: 231 WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM----NPDQLIAVGVNCVRPLMVSSLI 286
+ ++ S + + +G + ++A+ ++ NP+ +G+NCV ++
Sbjct: 191 ILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPN-FSFLGINCVSFNQSPDIL 249
Query: 287 EQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPL 346
E L + +P N+ L
Sbjct: 250 ESLH-------------------QALP-----------------------------NMAL 261
Query: 347 VVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 262 LAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 313
>sp|P87138|YDM7_SCHPO Uncharacterized protein C57A7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC57A7.07c PE=4 SV=2
Length = 308
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 161 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGA------DILAIET 214
IA +G + A++ EY+ Y + + +H+ RI+A+ + D +A E+
Sbjct: 97 IALCLGSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFES 156
Query: 215 IPASKEAQMLCRLLRE---WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA 271
+P EA+++C+L+++ W ++ W++ +C + I E + + ++N D +
Sbjct: 157 LPHVTEAEVVCQLIQDMKGW-SKRCWITCTCPERSTI---ERVSSIISKILSINHDSIWG 212
Query: 272 VGVNCVRPLM---VSSLIEQLKTENIPLVVYPN 301
+GVNC + ++ ++ L NI ++YP+
Sbjct: 213 IGVNCFHLSLLEPIAKMLSSLLPSNITAILYPD 245
>sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR321C PE=4
SV=1
Length = 105
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 343 NIPLVVYPNSGERYDAVNARWI-DRDLCEPVDKYVTDWLDEGVALVGGCCRTYAED 397
N+ L+ YPNSGE YD W+ + D D V ++ G ++GGCCRT +D
Sbjct: 38 NMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARIIGGCCRTSPKD 93
>sp|Q9KUW9|METH_VIBCH Methionine synthase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=metH PE=3 SV=1
Length = 1226
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 120/317 (37%), Gaps = 73/317 (23%)
Query: 4 VKLIDGGFSSQLSTYV--------GDIIDGH---PLWSSYFLATAKDAVVQTHRDFIKAG 52
+ LIDGG + + +Y +D H + + T + + H +++AG
Sbjct: 17 ILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEAG 76
Query: 53 ADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDI 112
ADI+ TN++ ++ DYD Q + + +++ +A E + DP+R
Sbjct: 77 ADILETNTFNSTTIAMA-----DYD--MQSLSAEINFAAAKLAREVAD-EWTAKDPSRPR 128
Query: 113 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASL 172
+AG +GP + + + D R++ G V Y S
Sbjct: 129 YVAGVLGPTNRTCSISPD--------------------VNDPGFRNVTFDGLVEAYSEST 168
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWP 232
R AL++ G+D++ IETI + A+ C +
Sbjct: 169 R---------------------------ALIKGGSDLILIETIFDTLNAKA-CAFAVDSV 200
Query: 233 HQKAWLSFSCKDDKHISNGESFT---QVARTCYN-MNPDQLIAVGVNC-VRPLMVSSLIE 287
++ +S I++ T Q YN + + I+ G+NC + P + +E
Sbjct: 201 FEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNCALGPDELRQYVE 260
Query: 288 QL-KTENIPLVVYPNSG 303
+L + + +PN+G
Sbjct: 261 ELSRISECYVSAHPNAG 277
>sp|Q9Z2Q4|METH_RAT Methionine synthase OS=Rattus norvegicus GN=Mtr PE=2 SV=1
Length = 1253
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 92/289 (31%)
Query: 36 TAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYD---SSYQLIKSSVDYVKE 92
T D + Q H++++ AGADI+ TN++ ++ DY +Y++ K S D ++
Sbjct: 60 TQPDVIYQIHKEYLLAGADIIETNTFSST-----SIAQADYGLEHLAYRMNKCSADVARK 114
Query: 93 A---IALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHR 149
A I L+ R +AGS+GP +L
Sbjct: 115 AAEEITLQTGVKR----------FVAGSLGPTNKTL------------------------ 140
Query: 150 LITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADI 209
SV P S R DY +++ + E ++ + + L++ G DI
Sbjct: 141 --------------SVSP--------SVERPDY-RNITFDELVEAYQEQAKGLLDGGVDI 177
Query: 210 LAIETIPASKEAQ----MLCRLLRE--WPHQKAWLSFSCKDDKHIS----NGESF-TQVA 258
L IETI + A+ L +L E + ++S + D + GE+F T V+
Sbjct: 178 LLIETIFDTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFVTSVS 237
Query: 259 RT---CYNMNPDQLIAVGVNCVRPLMVSSLIEQL-KTENIPLVVYPNSG 303
+ C +N A+G +RP IE + K ++ YPN+G
Sbjct: 238 HSDPLCIGLN----CALGAAEMRP-----FIETIGKCTTAYVLCYPNAG 277
>sp|Q5M8Z0|BHMT1_XENTR Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis
GN=bhmt PE=2 SV=1
Length = 403
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 73/192 (38%), Gaps = 44/192 (22%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AGA+++ T ++
Sbjct: 17 GEVVIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTF 73
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSV 118
AS L+ +Y K S V EA IA E + D L+AG V
Sbjct: 74 YASDD------KLENRGNYVAKKISGQKVNEAACDIAREVAN--------EGDALVAGGV 119
Query: 119 G--PYGASLRDGSEYRG-------------------DYVEHVSEATMAEWHRLITDDPAR 157
P S + E +G +Y EHV EA W + + +
Sbjct: 120 SQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAV---WAVEVLKESGK 176
Query: 158 DILIAGSVGPYG 169
+ +GP G
Sbjct: 177 PVAATLCIGPQG 188
>sp|Q5RFG2|BHMT1_PONAB Betaine--homocysteine S-methyltransferase 1 OS=Pongo abelii GN=BHMT
PE=2 SV=1
Length = 406
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF L + P W+ +AV Q HR+F++AG++++ T ++ AS
Sbjct: 26 DGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASED- 81
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG--PYGASL 125
L+ +Y L K S V EA AR +D+ D L+AG V P S
Sbjct: 82 -----KLENRGNYVLEKISGQKVNEAA---CDIARQVADE--GDALVAGGVSQTPSYLSC 131
Query: 126 RDGSEYR-------------------GDYVEHVSEATMAEWHRLITDDPARDILIAGSVG 166
+ +E + +Y EHV EA A + + P + G G
Sbjct: 132 KSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMCIGPEG 191
>sp|Q93088|BHMT1_HUMAN Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens GN=BHMT
PE=1 SV=2
Length = 406
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 35/180 (19%)
Query: 8 DGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGG 67
DGGF L + P W+ +AV Q HR+F++AG++++ T ++ AS
Sbjct: 26 DGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASED- 81
Query: 68 FMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG--PYGASL 125
L+ +Y L K S V EA AR +D+ D L+AG V P S
Sbjct: 82 -----KLENRGNYVLEKISGQEVNEAA---CDIARQVADE--GDALVAGGVSQTPSYLSC 131
Query: 126 RDGSEYR-------------------GDYVEHVSEATMAEWHRLITDDPARDILIAGSVG 166
+ +E + +Y EHV EA A + + P + G G
Sbjct: 132 KSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMCIGPEG 191
>sp|Q7MHB1|METH_VIBVY Methionine synthase OS=Vibrio vulnificus (strain YJ016) GN=metH
PE=3 SV=1
Length = 1226
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 92/255 (36%), Gaps = 62/255 (24%)
Query: 154 DPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIE 213
+PA+ +AG +GP + + +VS + E + +AL+ G+D++ IE
Sbjct: 123 NPAKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRGGSDLILIE 182
Query: 214 TIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFT---QVARTCYN-MNPDQL 269
TI + A+ C E ++ + I++ T Q YN + +
Sbjct: 183 TIFDTLNAKA-CAFAVESVFEELGFALPVMISGTITDASGRTLSGQTTEAFYNSLRHVRP 241
Query: 270 IAVGVNC-VRPLMVSSLIEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQMLCRLLRE 327
I+ G+NC + P + +E+L + V +PN+G
Sbjct: 242 ISFGLNCALGPDELRPYVEELSRISETFVSTHPNAG------------------------ 277
Query: 328 WPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEG-VAL 386
PN+ YD E + ++V +W G + L
Sbjct: 278 ---------------------LPNAFGEYDLS---------PEEMAEHVKEWAQSGFLNL 307
Query: 387 VGGCCRTYAEDTLHM 401
+GGCC T E HM
Sbjct: 308 IGGCCGTTPEHIRHM 322
>sp|A6H5Y3|METH_MOUSE Methionine synthase OS=Mus musculus GN=Mtr PE=2 SV=1
Length = 1253
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 36 TAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYD---SSYQLIKSSVDYVKE 92
T D + Q H++++ AGADI+ TN++ ++ DY +Y++ K S D ++
Sbjct: 60 TQPDIIYQIHKEYLLAGADIIETNTFSST-----SIAQADYGLEHLAYRMNKCSADVARK 114
Query: 93 A---IALEATHARIRSDDPARDILIAGSVGPYGASL 125
A I L+ R +AG++GP +L
Sbjct: 115 AAEEITLQTGVKR----------FVAGALGPTNKTL 140
>sp|Q54P92|METH_DICDI Methionine synthase OS=Dictyostelium discoideum GN=mtr PE=3 SV=1
Length = 1260
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 36/197 (18%)
Query: 132 RGDY-VEHVSEATMAEWHRL--------ITDDPARDILIAGSVGPYGASLRDGSEYRGDY 182
+ DY +EH+ + E RL DP+R + G+VGP +
Sbjct: 99 QADYKMEHLVKRINIESARLAKSACEEYTKKDPSRPRFVCGAVGPTNKTASISPSVERPE 158
Query: 183 VEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW-----PHQKAW 237
+V + + +++ALVE G D++ +ET+ S + + E+ P +
Sbjct: 159 ARNVLFDELVSGYLEQVEALVEGGIDVILVETVFDSLNCKAALFAIEEFFKTYSPRLPVF 218
Query: 238 LSFSC--KDDKHIS--NGESF-TQVARTCYNMNPDQLIAVGVNC------VRPLMVSSLI 286
+S + K + +S GE+F T VA L+ G+NC +RP + +
Sbjct: 219 VSGTIVDKSGRTLSGQTGEAFYTSVASA-------NLMVFGLNCALGAQEMRPFLQNI-- 269
Query: 287 EQLKTENIPLVVYPNSG 303
K + YPN+G
Sbjct: 270 --SKCSECYVSCYPNAG 284
>sp|Q55786|METH_SYNY3 Methionine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=metH PE=3 SV=1
Length = 1195
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 30 SSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDY 89
+ Y + T +AV HR F +AGAD+V T+++ + E+ DL D SY Y
Sbjct: 46 NEYLVHTKPEAVATVHRAFYEAGADVVETDTFGGTPLVLAEY-DL-ADQSY--------Y 95
Query: 90 VKEAIALEATHARIRSDDPARDILIAGSVGP 120
+ +A A A P + +AGS+GP
Sbjct: 96 LNKAAAELAKAVAAEFSTPEKPRFVAGSMGP 126
>sp|Q5XGM3|BHMT1_XENLA Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis
GN=bhmt PE=2 SV=1
Length = 403
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 44/192 (22%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AGA+++ T ++
Sbjct: 17 GEVVIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTF 73
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEA---IALEATHARIRSDDPARDILIAGSV 118
AS L+ +Y K S V E IA E + D L+AG V
Sbjct: 74 YASDD------KLENRGNYVAEKISGQKVNEVACDIAREVAN--------EGDALVAGGV 119
Query: 119 G--PYGASLRDGSEYRG-------------------DYVEHVSEATMAEWHRLITDDPAR 157
P S + E +G +Y EHV EA W + + +
Sbjct: 120 SQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAV---WAVEVLKESGK 176
Query: 158 DILIAGSVGPYG 169
+ +GP G
Sbjct: 177 PVAATLCIGPEG 188
>sp|B2GBR9|LEPA_LACF3 Elongation factor 4 OS=Lactobacillus fermentum (strain NBRC 3956 /
LMG 18251) GN=lepA PE=3 SV=1
Length = 610
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 125 LRDGSEYRGDYVEHVSEATMAEWHRLITDDP---ARDILIAGSVGPYGASLRDGSEYR-G 180
+++G+ +GD +E ++ + E + + P ARD L+AG VG A+++D + R G
Sbjct: 221 VKEGTVKKGDKIEFMNSKAVYEVAEVGINSPKPLARDFLMAGDVGYVTAAIKDIKDARVG 280
Query: 181 DYV---EHVSEATMAEWHRPRIQALVEAG 206
D + H ++ +A + ++Q +V AG
Sbjct: 281 DTITDANHPTDKPLAGYR--QMQPMVYAG 307
>sp|Q8DCJ7|METH_VIBVU Methionine synthase OS=Vibrio vulnificus (strain CMCP6) GN=metH
PE=3 SV=1
Length = 1226
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 146 EWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEA 205
EW +PA+ +AG +GP + + +VS + E + +AL+
Sbjct: 118 EW---TAQNPAKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRG 174
Query: 206 GADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFT---QVARTCY 262
G+D++ IETI + A+ C + ++ + I++ T Q Y
Sbjct: 175 GSDLILIETIFDTLNAKA-CAFAVDSVFEELGFALPVMISGTITDASGRTLSGQTTEAFY 233
Query: 263 N-MNPDQLIAVGVNC-VRPLMVSSLIEQLKTENIPLV-VYPNSGEHILAIETIPASKEAQ 319
N + + I+ G+NC + P + +E+L + V +PN+G
Sbjct: 234 NSLRHVRPISFGLNCALGPDELRPYVEELSRISETFVSTHPNAG---------------- 277
Query: 320 MLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDW 379
PN+ YD E + ++V +W
Sbjct: 278 -----------------------------LPNAFGEYDLS---------PEEMAEHVKEW 299
Query: 380 LDEG-VALVGGCCRTYAEDTLHM 401
G + L+GGCC T E HM
Sbjct: 300 AQSGFLNLIGGCCGTTPEHIRHM 322
>sp|Q68FT5|BHMT2_RAT S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Rattus norvegicus GN=Bhmt2 PE=2 SV=1
Length = 363
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L G + G LW+ + AV Q H +F++AGAD++ T ++
Sbjct: 20 GEVVVGDGGFLFTLEKR-GFVKAG--LWTPEAVVEYPSAVRQLHTEFLRAGADVLQTFTF 76
Query: 62 QAS 64
A+
Sbjct: 77 SAA 79
>sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2
Length = 1265
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 110/286 (38%), Gaps = 87/286 (30%)
Query: 36 TAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYD---SSYQLIKSSVDYVKE 92
T D + Q H++++ AGADI+ TN++ ++ DY +Y++ S ++
Sbjct: 73 TQPDVIYQIHKEYLLAGADIIETNTFSST-----SIAQADYGLEHLAYRMNMCSAGVARK 127
Query: 93 AIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLIT 152
A I+ +AG++GP +L
Sbjct: 128 AAEEVTLQTGIKR-------FVAGALGPTNKTL--------------------------- 153
Query: 153 DDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAI 212
SV P S R DY +++ + E ++ + + L++ G DIL I
Sbjct: 154 -----------SVSP--------SVERPDY-RNITFDELVEAYQEQAKGLLDGGVDILLI 193
Query: 213 ETIPASKEAQMLCRLLREWPHQK-----AWLSFSCKDDKHIS----NGESFTQVARTCYN 263
ETI + A+ L+ +K ++S + D + GE F +
Sbjct: 194 ETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFV------IS 247
Query: 264 MNPDQLIAVGVNC------VRPLMVSSLIEQLKTENIPLVVYPNSG 303
++ + + +G+NC +RP + +I + T + + YPN+G
Sbjct: 248 VSHGEPLCIGLNCALGAAEMRPFI--EIIGKCTTAYV--LCYPNAG 289
>sp|Q09582|METH_CAEEL Probable methionine synthase OS=Caenorhabditis elegans GN=nos-1
PE=1 SV=1
Length = 1249
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 22/191 (11%)
Query: 129 SEYRGDYVEHVSEATMAEWHRLITDD----PARDILIAGSVGPYGASLRDGSEYRGDYVE 184
++YR +++ H A R DD R + G++GP +L
Sbjct: 94 ADYRCEHLVHEINYQSALVARRACDDVGAATGRRRYVCGAIGPTNRTLSISPSVEKPDFR 153
Query: 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREW------PHQKAWL 238
+V+ + + + + ++L++ G D+L +ET+ S A+ +R P +L
Sbjct: 154 NVTFQELVKAYGDQARSLIQGGVDVLLVETVFDSANAKAALFAIRTLFEDEGVPEMPVFL 213
Query: 239 SFSCKD--DKHIS--NGESFTQVARTCYNMNPDQLIAVGVNCVRPL--MVSSLIEQLKTE 292
S + D + +S GE+F + M AVG+NC M + K
Sbjct: 214 SGTIVDMSGRTLSGQTGEAFLVSTKQGKPM------AVGLNCALGAKDMRQFVDNMSKWS 267
Query: 293 NIPLVVYPNSG 303
+ ++ YPN+G
Sbjct: 268 DSFIICYPNAG 278
>sp|O09171|BHMT1_RAT Betaine--homocysteine S-methyltransferase 1 OS=Rattus norvegicus
GN=Bhmt PE=1 SV=1
Length = 407
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 38/189 (20%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AG++++ T ++
Sbjct: 20 GEVVIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTF 76
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG-- 119
AS L+ +Y K S V EA AR +D+ D L+AG V
Sbjct: 77 YASED------KLENRGNYVAEKISGQKVNEAA---CDIARQVADE--GDALVAGGVSQT 125
Query: 120 PYGASLRDGSEYR-------------------GDYVEHVSEATMAEWHRLITDDPARDIL 160
P S + +E + +Y EHV EA W + I
Sbjct: 126 PSYLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAV---WAVEALKTSGKPIA 182
Query: 161 IAGSVGPYG 169
+GP G
Sbjct: 183 ATMCIGPEG 191
>sp|Q0CUC1|BGLG_ASPTN Probable beta-glucosidase G OS=Aspergillus terreus (strain NIH 2624
/ FGSC A1156) GN=bglG PE=3 SV=1
Length = 817
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 98 ATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAE 146
TH+ + S + D+ + G +GPYG + GS Y G+ + V T+ E
Sbjct: 307 GTHSGVASIESGLDMNMPGGLGPYGTIPQAGSFYGGNVTQGVKNGTIDE 355
>sp|Q5I597|BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1 OS=Bos taurus GN=BHMT
PE=2 SV=1
Length = 407
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 38/189 (20%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AG++++ T ++
Sbjct: 20 GEVIIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTF 76
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG-- 119
AS L+ +Y K S V EA AR +D+ D L+AG V
Sbjct: 77 YASED------KLENRGNYVAEKISGQKVNEAA---CDIARQVADE--GDALVAGGVSQT 125
Query: 120 PYGASLRDGSEYR-------------------GDYVEHVSEATMAEWHRLITDDPARDIL 160
P S + +E + +Y EHV EA W + +
Sbjct: 126 PSYLSCKSETEVKKVFQQQLEVFVKKNVDFLIAEYFEHVEEAV---WAVEALKASGKPVA 182
Query: 161 IAGSVGPYG 169
+GP G
Sbjct: 183 ATMCIGPEG 191
>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus musculus GN=Arhgap27 PE=1
SV=1
Length = 869
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 173 RDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIE 213
RDGSEY ++H SEA ++ WH+ + + E AD+L E
Sbjct: 566 RDGSEY---LIQHDSEAIISTWHKAIAEGISELSADLLQGE 603
>sp|O35490|BHMT1_MOUSE Betaine--homocysteine S-methyltransferase 1 OS=Mus musculus
GN=Bhmt PE=2 SV=1
Length = 407
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AG++++ T ++
Sbjct: 20 GEVVIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTF 76
Query: 62 QAS 64
AS
Sbjct: 77 YAS 79
>sp|O82054|COMT1_SACOF Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT
PE=2 SV=1
Length = 362
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 484 GVALVGG--CCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 541
GV VGG A D + MK L DW D H + + + CY+ P+ + V
Sbjct: 243 GVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCAT------LLKNCYDALPENGKVIIVE 296
Query: 542 CVRPLMVSPLIEQLKTENIPLVVY---PNSGERY--DFH 575
CV P+ + + ++ +++ P ERY +FH
Sbjct: 297 CVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFH 335
>sp|Q06509|COMT1_MAIZE Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1
Length = 364
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 484 GVALVGG--CCRTYAEDTLHMKHRLDDWDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 541
GV VGG A D + MK L DW D H + + + CY+ P+ + V
Sbjct: 245 GVRHVGGDMFASVPAGDAILMKWILHDWSDAHCAT------LLKNCYDALPENGKVIVVE 298
Query: 542 CVRPLMVSPLIEQLKTENIPLVVY---PNSGERYD 573
CV P+ + ++ +++ P ERY+
Sbjct: 299 CVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYE 333
>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=metH PE=3 SV=3
Length = 1227
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Query: 155 PARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIET 214
P + +AG +GP + + +++ + +R +ALVE GAD++ IET
Sbjct: 123 PEKPRFVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGADLILIET 182
Query: 215 IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFT---QVARTCYN-MNPDQLI 270
+ + A+ ++E + + I++ T Q YN + + +
Sbjct: 183 VFDTLNAKAAVFAVKE-EFEALGVDLPIMISGTITDASGRTLSGQTTEAFYNSLRHAEAL 241
Query: 271 AVGVNC-VRPLMVSSLIEQL-KTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREW 328
G+NC + P + +++L + + +PN+G L +A + + +REW
Sbjct: 242 TFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG---LPNAFGEYDLDADTMAKQIREW 298
>sp|Q95332|BHMT1_PIG Betaine--homocysteine S-methyltransferase 1 (Fragment) OS=Sus
scrofa GN=BHMT PE=1 SV=3
Length = 278
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 38/189 (20%)
Query: 2 ANVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSY 61
V + DGGF L + P W+ +AV Q HR+F++AG++++ T ++
Sbjct: 20 GEVVIGDGGFVFALEKR--GYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTF 76
Query: 62 QASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVG-- 119
AS L+ +Y K S V EA AR +D+ D L+AG V
Sbjct: 77 YASED------KLENRGNYVAEKISGQKVNEAA---CDIARQVADE--GDALVAGGVSQT 125
Query: 120 PYGASLRDGSEYR-------------------GDYVEHVSEATMAEWHRLITDDPARDIL 160
P S + +E + +Y EHV EA W + +
Sbjct: 126 PSYLSCKSETEVKKVFRQQLEVFMKKNVDFLIAEYFEHVEEAV---WAVEALKASGKPVA 182
Query: 161 IAGSVGPYG 169
+GP G
Sbjct: 183 ATMCIGPEG 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,868,134
Number of Sequences: 539616
Number of extensions: 10379684
Number of successful extensions: 24600
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 24364
Number of HSP's gapped (non-prelim): 181
length of query: 591
length of database: 191,569,459
effective HSP length: 123
effective length of query: 468
effective length of database: 125,196,691
effective search space: 58592051388
effective search space used: 58592051388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)