Query psy17603
Match_columns 591
No_of_seqs 399 out of 2392
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 18:19:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17603.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17603hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 6.1E-60 2.1E-64 503.8 25.9 317 3-447 21-353 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 2.6E-58 8.9E-63 512.4 38.1 410 3-570 14-442 (566)
3 1q7z_A 5-methyltetrahydrofolat 100.0 4.6E-29 1.6E-33 277.5 17.4 232 187-510 42-291 (566)
4 1lt8_A Betaine-homocysteine me 100.0 1.6E-28 5.4E-33 261.9 13.7 242 187-509 52-317 (406)
5 3eol_A Isocitrate lyase; seatt 93.6 0.75 2.6E-05 48.8 13.5 82 282-391 265-348 (433)
6 3i4e_A Isocitrate lyase; struc 93.1 0.98 3.4E-05 48.0 13.5 154 197-391 171-353 (439)
7 3lg3_A Isocitrate lyase; conse 93.0 0.65 2.2E-05 49.2 12.0 155 197-391 171-353 (435)
8 1s2w_A Phosphoenolpyruvate pho 92.0 6.8 0.00023 39.5 17.6 28 299-326 179-207 (295)
9 1f8m_A Isocitrate lyase, ICL; 88.6 3.9 0.00013 43.4 12.7 155 197-390 167-348 (429)
10 4fxs_A Inosine-5'-monophosphat 86.3 8.3 0.00028 41.7 14.1 43 196-238 233-277 (496)
11 1xky_A Dihydrodipicolinate syn 86.3 12 0.00041 37.6 14.5 79 185-276 29-115 (301)
12 4h3d_A 3-dehydroquinate dehydr 85.2 29 0.00098 34.1 16.3 156 187-406 30-193 (258)
13 1o5k_A DHDPS, dihydrodipicolin 85.2 14 0.0005 37.1 14.5 78 185-275 29-114 (306)
14 3vnd_A TSA, tryptophan synthas 85.1 15 0.00052 36.3 14.3 173 343-554 17-227 (267)
15 3nl6_A Thiamine biosynthetic b 84.5 7.1 0.00024 42.8 12.6 75 495-571 295-373 (540)
16 3b4u_A Dihydrodipicolinate syn 84.4 19 0.00064 36.1 14.8 78 185-275 20-105 (294)
17 3eoo_A Methylisocitrate lyase; 84.4 7.7 0.00026 39.1 11.9 28 298-325 179-206 (298)
18 3ih1_A Methylisocitrate lyase; 84.4 5.4 0.00018 40.5 10.7 27 299-325 184-210 (305)
19 4ay7_A Methylcobalamin\: coenz 84.3 19 0.00066 36.7 15.2 82 199-290 255-344 (348)
20 3eoo_A Methylisocitrate lyase; 84.0 1 3.4E-05 45.7 5.1 45 194-242 172-216 (298)
21 3ffs_A Inosine-5-monophosphate 83.8 11 0.00038 39.6 13.3 43 196-238 146-189 (400)
22 2v9d_A YAGE; dihydrodipicolini 83.5 15 0.0005 37.8 13.8 78 185-275 48-133 (343)
23 2cw6_A Hydroxymethylglutaryl-C 83.5 31 0.0011 34.4 16.1 42 367-408 153-197 (298)
24 3fkr_A L-2-keto-3-deoxyarabona 83.1 23 0.00078 35.7 15.0 77 185-274 25-109 (309)
25 2ehh_A DHDPS, dihydrodipicolin 82.9 23 0.00078 35.4 14.7 78 185-275 17-102 (294)
26 1jub_A Dihydroorotate dehydrog 82.8 11 0.00036 37.9 12.3 53 314-392 142-194 (311)
27 3lye_A Oxaloacetate acetyl hyd 82.7 1.9 6.4E-05 43.9 6.5 45 195-242 180-224 (307)
28 3fa4_A 2,3-dimethylmalate lyas 82.6 15 0.0005 37.2 13.0 29 298-326 178-206 (302)
29 2ojp_A DHDPS, dihydrodipicolin 82.3 13 0.00044 37.2 12.6 79 185-276 18-104 (292)
30 4ay7_A Methylcobalamin\: coenz 82.1 45 0.0015 33.8 17.0 44 365-408 299-346 (348)
31 3lye_A Oxaloacetate acetyl hyd 82.0 11 0.00039 38.1 12.0 28 299-326 187-214 (307)
32 1xg4_A Probable methylisocitra 82.0 2.4 8.2E-05 42.8 7.0 28 298-325 175-202 (295)
33 3d0c_A Dihydrodipicolinate syn 81.9 23 0.00078 35.8 14.4 78 185-276 29-114 (314)
34 1zlp_A PSR132, petal death pro 81.4 1.5 5E-05 44.9 5.1 45 193-241 189-233 (318)
35 3na8_A Putative dihydrodipicol 81.2 18 0.00062 36.6 13.4 79 185-276 41-127 (315)
36 2ze3_A DFA0005; organic waste 81.2 7.9 0.00027 38.6 10.4 27 299-325 177-203 (275)
37 4fo4_A Inosine 5'-monophosphat 81.0 20 0.00068 37.2 13.8 44 196-239 110-155 (366)
38 2yr1_A 3-dehydroquinate dehydr 81.0 41 0.0014 32.9 15.5 156 187-406 30-193 (257)
39 2yxg_A DHDPS, dihydrodipicolin 81.0 24 0.00084 35.0 14.1 78 185-275 17-102 (289)
40 3cpr_A Dihydrodipicolinate syn 80.3 12 0.00041 37.7 11.6 78 185-275 33-118 (304)
41 3qze_A DHDPS, dihydrodipicolin 80.1 23 0.00078 35.8 13.7 78 185-275 40-125 (314)
42 3nav_A Tryptophan synthase alp 80.0 31 0.0011 34.1 14.3 78 476-554 142-229 (271)
43 1xg4_A Probable methylisocitra 79.8 1.7 6E-05 43.9 5.1 45 194-242 168-212 (295)
44 4avf_A Inosine-5'-monophosphat 79.7 22 0.00077 38.2 14.2 44 196-239 231-276 (490)
45 3m5v_A DHDPS, dihydrodipicolin 79.5 29 0.001 34.7 14.2 79 185-276 24-111 (301)
46 2eja_A URO-D, UPD, uroporphyri 79.2 26 0.00089 35.4 13.9 42 367-408 286-335 (338)
47 2e6f_A Dihydroorotate dehydrog 79.0 7.2 0.00025 39.2 9.5 25 369-393 173-198 (314)
48 3eb2_A Putative dihydrodipicol 78.6 22 0.00077 35.6 13.0 77 185-274 21-105 (300)
49 2vc6_A MOSA, dihydrodipicolina 78.4 11 0.00038 37.7 10.6 78 186-276 18-103 (292)
50 3bg3_A Pyruvate carboxylase, m 78.3 43 0.0015 37.9 16.4 42 368-409 259-303 (718)
51 1s2w_A Phosphoenolpyruvate pho 78.1 2.5 8.6E-05 42.7 5.6 43 195-239 172-215 (295)
52 3tak_A DHDPS, dihydrodipicolin 77.9 11 0.00037 37.7 10.3 78 185-275 18-103 (291)
53 3flu_A DHDPS, dihydrodipicolin 77.8 16 0.00055 36.6 11.6 78 185-275 24-109 (297)
54 2p10_A MLL9387 protein; putati 77.7 7.7 0.00026 38.7 8.9 81 186-277 11-129 (286)
55 3l21_A DHDPS, dihydrodipicolin 77.4 14 0.00049 37.2 11.1 79 185-276 32-118 (304)
56 3ih1_A Methylisocitrate lyase; 77.2 2.4 8.4E-05 43.0 5.2 42 195-240 177-218 (305)
57 3o1n_A 3-dehydroquinate dehydr 77.1 33 0.0011 34.0 13.5 155 187-406 50-213 (276)
58 2hjp_A Phosphonopyruvate hydro 76.9 20 0.00069 35.9 11.9 27 299-325 175-202 (290)
59 1zco_A 2-dehydro-3-deoxyphosph 76.6 47 0.0016 32.6 14.4 45 195-240 39-94 (262)
60 2qjg_A Putative aldolase MJ040 76.4 32 0.0011 33.5 13.2 73 198-275 104-186 (273)
61 3si9_A DHDPS, dihydrodipicolin 76.3 16 0.00055 37.0 11.1 78 185-275 39-124 (315)
62 1ydn_A Hydroxymethylglutaryl-C 76.3 56 0.0019 32.3 15.2 42 367-408 152-196 (295)
63 3h5d_A DHDPS, dihydrodipicolin 76.0 31 0.0011 34.8 13.2 72 195-275 30-110 (311)
64 2r8w_A AGR_C_1641P; APC7498, d 75.8 17 0.00057 37.2 11.2 78 185-275 51-136 (332)
65 1aj0_A DHPS, dihydropteroate s 75.3 45 0.0016 33.1 13.9 61 158-229 14-83 (282)
66 2hmc_A AGR_L_411P, dihydrodipi 75.2 51 0.0017 33.7 14.7 77 185-275 43-125 (344)
67 2z6i_A Trans-2-enoyl-ACP reduc 75.2 54 0.0018 33.1 14.9 78 199-287 29-107 (332)
68 1f6k_A N-acetylneuraminate lya 74.7 29 0.001 34.5 12.5 78 185-275 20-106 (293)
69 2nx9_A Oxaloacetate decarboxyl 74.7 94 0.0032 33.1 17.2 41 368-408 156-199 (464)
70 3igs_A N-acetylmannosamine-6-p 74.5 43 0.0015 32.1 13.3 85 195-291 38-127 (232)
71 3cyv_A URO-D, UPD, uroporphyri 74.5 32 0.0011 35.0 13.1 42 367-408 299-348 (354)
72 2rfg_A Dihydrodipicolinate syn 74.5 14 0.00049 37.0 10.2 77 186-275 18-102 (297)
73 4ef8_A Dihydroorotate dehydrog 74.4 11 0.00039 38.9 9.5 49 314-388 177-226 (354)
74 2wkj_A N-acetylneuraminate lya 74.2 14 0.00047 37.2 10.0 78 185-275 28-113 (303)
75 1r3s_A URO-D, uroporphyrinogen 73.9 73 0.0025 32.5 15.7 42 367-408 312-360 (367)
76 3a5f_A Dihydrodipicolinate syn 73.9 13 0.00043 37.2 9.5 78 186-276 19-104 (291)
77 3khj_A Inosine-5-monophosphate 73.8 75 0.0026 32.6 15.7 74 204-292 68-143 (361)
78 1sfl_A 3-dehydroquinate dehydr 73.7 41 0.0014 32.4 12.9 146 199-405 23-178 (238)
79 1z41_A YQJM, probable NADH-dep 73.7 72 0.0024 32.3 15.4 75 185-261 133-235 (338)
80 3qfe_A Putative dihydrodipicol 73.5 71 0.0024 32.1 15.2 77 185-274 28-112 (318)
81 3q58_A N-acetylmannosamine-6-p 73.5 33 0.0011 33.0 12.1 84 195-291 38-127 (229)
82 2hjp_A Phosphonopyruvate hydro 73.5 2.7 9.2E-05 42.4 4.4 44 195-240 168-212 (290)
83 3vav_A 3-methyl-2-oxobutanoate 73.2 76 0.0026 31.4 14.9 91 201-322 114-204 (275)
84 2nuw_A 2-keto-3-deoxygluconate 73.1 30 0.001 34.4 12.1 77 185-275 16-98 (288)
85 3gr7_A NADPH dehydrogenase; fl 72.6 41 0.0014 34.3 13.2 59 185-243 133-219 (340)
86 2ze3_A DFA0005; organic waste 72.5 2.5 8.5E-05 42.3 3.8 39 194-236 169-207 (275)
87 1pii_A N-(5'phosphoribosyl)ant 72.2 1.1E+02 0.0036 32.6 17.9 63 198-276 122-185 (452)
88 3e96_A Dihydrodipicolinate syn 72.0 13 0.00045 37.6 9.3 77 185-275 29-113 (316)
89 3usb_A Inosine-5'-monophosphat 71.7 72 0.0025 34.4 15.6 43 196-238 258-302 (511)
90 3daq_A DHDPS, dihydrodipicolin 71.4 19 0.00067 35.9 10.3 77 186-275 20-104 (292)
91 1j93_A UROD, uroporphyrinogen 71.2 60 0.002 32.9 14.2 41 367-407 303-350 (353)
92 2qiw_A PEP phosphonomutase; st 71.0 20 0.00067 35.3 9.9 95 197-324 97-202 (255)
93 3dz1_A Dihydrodipicolinate syn 71.0 50 0.0017 33.2 13.3 77 185-274 25-108 (313)
94 3bo9_A Putative nitroalkan dio 70.3 94 0.0032 31.3 16.6 80 199-291 43-122 (326)
95 3fa4_A 2,3-dimethylmalate lyas 70.2 4.3 0.00015 41.1 5.0 44 195-241 172-215 (302)
96 3ble_A Citramalate synthase fr 70.1 65 0.0022 32.7 14.1 42 368-409 167-211 (337)
97 1w3i_A EDA, 2-keto-3-deoxy glu 69.4 50 0.0017 32.8 12.8 77 185-275 16-98 (293)
98 3hgj_A Chromate reductase; TIM 68.9 35 0.0012 34.9 11.8 90 185-276 141-260 (349)
99 2v82_A 2-dehydro-3-deoxy-6-pho 68.9 43 0.0015 31.1 11.7 43 195-239 21-63 (212)
100 2qf7_A Pyruvate carboxylase pr 68.7 52 0.0018 39.4 14.7 42 367-408 706-750 (1165)
101 1rqb_A Transcarboxylase 5S sub 68.1 29 0.00098 37.9 11.3 85 302-409 129-217 (539)
102 4exq_A UPD, URO-D, uroporphyri 68.1 42 0.0014 34.6 12.3 42 367-408 309-358 (368)
103 1nvm_A HOA, 4-hydroxy-2-oxoval 67.9 1.1E+02 0.0037 31.1 19.3 43 367-409 146-191 (345)
104 3noy_A 4-hydroxy-3-methylbut-2 67.8 12 0.0004 38.6 7.6 47 195-243 48-94 (366)
105 3eeg_A 2-isopropylmalate synth 67.7 55 0.0019 33.1 12.8 164 186-409 25-193 (325)
106 1to3_A Putative aldolase YIHT; 67.6 94 0.0032 31.1 14.4 39 201-240 116-162 (304)
107 1eep_A Inosine 5'-monophosphat 67.1 56 0.0019 33.9 13.2 65 196-274 155-221 (404)
108 1z41_A YQJM, probable NADH-dep 66.9 1E+02 0.0035 31.1 14.8 166 187-392 37-251 (338)
109 1f76_A Dihydroorotate dehydrog 66.6 63 0.0021 32.5 13.1 23 370-392 225-247 (336)
110 2r91_A 2-keto-3-deoxy-(6-phosp 66.5 43 0.0015 33.2 11.6 76 186-275 16-97 (286)
111 2ftp_A Hydroxymethylglutaryl-C 65.6 1.1E+02 0.0038 30.3 20.3 44 366-409 155-201 (302)
112 3ewb_X 2-isopropylmalate synth 65.2 1.1E+02 0.0039 30.3 14.7 43 367-409 147-192 (293)
113 3s5o_A 4-hydroxy-2-oxoglutarat 65.1 36 0.0012 34.2 10.8 78 185-275 31-116 (307)
114 1vrd_A Inosine-5'-monophosphat 65.1 54 0.0018 35.0 12.8 67 195-275 238-306 (494)
115 3b8i_A PA4872 oxaloacetate dec 64.4 48 0.0016 33.1 11.3 26 299-324 177-202 (287)
116 2cw6_A Hydroxymethylglutaryl-C 62.1 1.3E+02 0.0043 29.8 17.6 66 186-261 153-222 (298)
117 2inf_A URO-D, UPD, uroporphyri 61.9 68 0.0023 32.6 12.4 42 367-408 300-349 (359)
118 3f4w_A Putative hexulose 6 pho 61.7 77 0.0026 29.2 11.9 42 200-243 20-63 (211)
119 4dpp_A DHDPS 2, dihydrodipicol 61.7 42 0.0014 34.7 10.6 78 185-275 76-161 (360)
120 1o66_A 3-methyl-2-oxobutanoate 61.6 1E+02 0.0036 30.4 13.0 38 201-242 103-140 (275)
121 3rmj_A 2-isopropylmalate synth 61.4 1.5E+02 0.0052 30.5 19.8 43 367-409 154-199 (370)
122 3b8i_A PA4872 oxaloacetate dec 61.2 4.6 0.00016 40.6 3.1 39 195-237 170-208 (287)
123 3oix_A Putative dihydroorotate 61.1 50 0.0017 33.8 11.1 97 232-387 127-224 (345)
124 1to3_A Putative aldolase YIHT; 60.1 81 0.0028 31.6 12.3 38 370-407 177-218 (304)
125 1r3s_A URO-D, uroporphyrinogen 60.1 1.1E+02 0.0039 31.1 13.8 80 201-290 271-358 (367)
126 2qiw_A PEP phosphonomutase; st 59.9 4.5 0.00015 40.0 2.7 39 195-237 170-208 (255)
127 3bw2_A 2-nitropropane dioxygen 59.7 1.6E+02 0.0053 30.0 17.1 45 200-244 29-73 (369)
128 1zlp_A PSR132, petal death pro 59.2 4.8 0.00016 41.1 2.9 28 298-325 197-224 (318)
129 1ydo_A HMG-COA lyase; TIM-barr 59.1 56 0.0019 32.8 10.9 53 186-244 154-210 (307)
130 1f8m_A Isocitrate lyase, ICL; 58.4 11 0.00036 40.1 5.4 38 196-234 270-309 (429)
131 3lg3_A Isocitrate lyase; conse 57.2 11 0.00039 39.8 5.4 37 196-233 274-312 (435)
132 3eol_A Isocitrate lyase; seatt 57.0 12 0.00039 39.8 5.4 37 196-233 269-307 (433)
133 1jub_A Dihydroorotate dehydrog 56.5 1.6E+02 0.0053 29.1 16.2 47 195-241 108-166 (311)
134 3k30_A Histamine dehydrogenase 56.4 1.6E+02 0.0055 32.7 15.2 91 184-277 144-265 (690)
135 2nx9_A Oxaloacetate decarboxyl 55.9 2.1E+02 0.0072 30.4 15.5 89 199-292 106-199 (464)
136 3b0p_A TRNA-dihydrouridine syn 55.7 1.1E+02 0.0038 31.1 12.7 67 205-280 27-95 (350)
137 3i4e_A Isocitrate lyase; struc 55.0 13 0.00045 39.4 5.4 36 196-232 274-311 (439)
138 1vhn_A Putative flavin oxidore 54.2 56 0.0019 32.7 10.0 67 204-280 26-95 (318)
139 3lab_A Putative KDPG (2-keto-3 54.0 1.3E+02 0.0043 28.8 11.8 41 197-240 29-70 (217)
140 2b7n_A Probable nicotinate-nuc 53.7 21 0.00072 35.4 6.5 40 202-242 198-238 (273)
141 3inp_A D-ribulose-phosphate 3- 53.4 1.2E+02 0.0043 29.3 11.9 94 197-302 44-143 (246)
142 4af0_A Inosine-5'-monophosphat 53.3 22 0.00074 38.8 6.9 46 195-240 282-329 (556)
143 2inf_A URO-D, UPD, uroporphyri 52.7 1E+02 0.0035 31.3 11.9 37 200-244 259-295 (359)
144 3qja_A IGPS, indole-3-glycerol 52.5 1.8E+02 0.0061 28.5 13.8 41 197-237 76-117 (272)
145 2eja_A URO-D, UPD, uroporphyri 52.3 1.3E+02 0.0044 30.1 12.5 82 198-290 244-333 (338)
146 1qop_A Tryptophan synthase alp 51.8 1.8E+02 0.006 28.2 15.1 89 196-292 34-146 (268)
147 3kru_A NADH:flavin oxidoreduct 51.6 1.3E+02 0.0045 30.6 12.3 88 184-274 131-248 (343)
148 4e38_A Keto-hydroxyglutarate-a 51.1 83 0.0028 30.3 10.1 37 196-233 49-85 (232)
149 3nvt_A 3-deoxy-D-arabino-heptu 50.9 2.2E+02 0.0075 29.5 14.0 45 195-240 158-213 (385)
150 3o63_A Probable thiamine-phosp 50.8 1E+02 0.0035 29.8 10.8 19 195-213 45-63 (243)
151 1j93_A UROD, uroporphyrinogen 49.2 1.3E+02 0.0044 30.3 12.0 37 201-244 262-298 (353)
152 2jbm_A Nicotinate-nucleotide p 49.1 26 0.00089 35.2 6.4 41 201-242 212-253 (299)
153 1o4u_A Type II quinolic acid p 49.1 22 0.00076 35.5 5.8 45 198-243 205-250 (285)
154 3r89_A Orotidine 5'-phosphate 48.8 70 0.0024 32.0 9.4 97 187-291 41-145 (290)
155 2yw3_A 4-hydroxy-2-oxoglutarat 48.2 1.7E+02 0.006 27.2 13.2 38 195-235 27-64 (207)
156 3ovp_A Ribulose-phosphate 3-ep 47.8 1.2E+02 0.0042 28.8 10.8 93 197-301 21-120 (228)
157 3paj_A Nicotinate-nucleotide p 47.8 45 0.0015 33.9 7.9 60 199-275 244-303 (320)
158 3gr7_A NADPH dehydrogenase; fl 47.4 2.4E+02 0.0081 28.5 13.9 171 187-392 37-251 (340)
159 3tqv_A Nicotinate-nucleotide p 46.9 1E+02 0.0035 30.7 10.2 67 242-326 174-240 (287)
160 2rdx_A Mandelate racemase/muco 46.7 2.1E+02 0.0073 29.1 13.3 146 368-564 145-293 (379)
161 4h3d_A 3-dehydroquinate dehydr 46.5 2.1E+02 0.0073 27.7 14.1 82 308-407 55-137 (258)
162 3tqv_A Nicotinate-nucleotide p 46.4 31 0.0011 34.5 6.4 40 198-240 210-249 (287)
163 3usb_A Inosine-5'-monophosphat 46.3 1E+02 0.0035 33.2 11.1 62 199-274 311-387 (511)
164 3l0g_A Nicotinate-nucleotide p 46.2 57 0.002 32.8 8.3 57 253-326 193-249 (300)
165 3f4w_A Putative hexulose 6 pho 46.2 1.3E+02 0.0044 27.6 10.6 95 199-305 70-169 (211)
166 3vav_A 3-methyl-2-oxobutanoate 45.2 19 0.00066 35.8 4.6 45 187-237 168-212 (275)
167 3paj_A Nicotinate-nucleotide p 45.2 93 0.0032 31.5 9.7 57 253-326 217-273 (320)
168 2csu_A 457AA long hypothetical 45.1 3E+02 0.01 29.0 21.1 75 494-570 323-414 (457)
169 2ftp_A Hydroxymethylglutaryl-C 44.6 2.4E+02 0.0083 27.8 19.2 67 186-262 156-226 (302)
170 3l0g_A Nicotinate-nucleotide p 44.4 27 0.00092 35.1 5.5 31 198-229 219-249 (300)
171 3q58_A N-acetylmannosamine-6-p 43.2 28 0.00095 33.5 5.4 63 197-275 92-156 (229)
172 1qpo_A Quinolinate acid phosph 42.7 30 0.001 34.5 5.6 43 197-240 205-248 (284)
173 2gjl_A Hypothetical protein PA 42.6 2.2E+02 0.0076 28.3 12.4 84 199-291 32-116 (328)
174 1pii_A N-(5'phosphoribosyl)ant 42.6 1.9E+02 0.0064 30.7 12.1 160 379-568 126-314 (452)
175 3qja_A IGPS, indole-3-glycerol 42.6 57 0.0019 32.2 7.6 61 198-275 127-189 (272)
176 3m47_A Orotidine 5'-phosphate 42.2 1.1E+02 0.0038 29.1 9.5 99 34-228 73-171 (228)
177 3ixl_A Amdase, arylmalonate de 41.9 67 0.0023 30.9 7.9 38 372-409 55-97 (240)
178 3ist_A Glutamate racemase; str 41.9 59 0.002 32.0 7.6 48 186-237 47-95 (269)
179 3l5l_A Xenobiotic reductase A; 41.8 74 0.0025 32.6 8.7 89 185-275 147-266 (363)
180 3igs_A N-acetylmannosamine-6-p 40.8 32 0.0011 33.0 5.4 64 197-276 92-157 (232)
181 3ndo_A Deoxyribose-phosphate a 40.4 68 0.0023 30.9 7.6 26 37-62 144-170 (231)
182 1f76_A Dihydroorotate dehydrog 40.2 1.5E+02 0.0053 29.5 10.8 50 190-240 150-218 (336)
183 1eye_A DHPS 1, dihydropteroate 40.2 2.8E+02 0.0096 27.3 15.2 46 158-214 5-50 (280)
184 3zwt_A Dihydroorotate dehydrog 39.6 1.3E+02 0.0044 30.9 10.1 44 233-281 146-189 (367)
185 2lnd_A De novo designed protei 39.6 25 0.00086 28.1 3.5 31 543-573 35-65 (112)
186 1ps9_A 2,4-dienoyl-COA reducta 39.3 1.3E+02 0.0044 33.3 10.9 88 185-274 130-247 (671)
187 3o1n_A 3-dehydroquinate dehydr 39.0 2.6E+02 0.0088 27.4 11.8 46 195-241 121-167 (276)
188 1ps9_A 2,4-dienoyl-COA reducta 38.7 2.5E+02 0.0085 30.9 13.1 92 188-289 36-175 (671)
189 2ekc_A AQ_1548, tryptophan syn 38.7 1.2E+02 0.0042 29.3 9.4 90 196-292 34-146 (262)
190 2nuw_A 2-keto-3-deoxygluconate 38.4 91 0.0031 30.8 8.5 107 471-579 20-146 (288)
191 1mxs_A KDPG aldolase; 2-keto-3 38.2 2.6E+02 0.009 26.4 14.4 38 196-234 41-78 (225)
192 1w8s_A FBP aldolase, fructose- 36.7 3E+02 0.01 26.6 13.3 138 199-407 98-249 (263)
193 1vhc_A Putative KHG/KDPG aldol 36.6 2.8E+02 0.0095 26.2 13.2 153 195-399 31-195 (224)
194 1m3u_A 3-methyl-2-oxobutanoate 36.6 41 0.0014 33.2 5.4 41 192-237 160-200 (264)
195 3k30_A Histamine dehydrogenase 36.5 4E+02 0.014 29.3 14.4 25 267-291 168-193 (690)
196 3b0p_A TRNA-dihydrouridine syn 36.5 1.4E+02 0.0048 30.3 9.8 26 368-393 68-93 (350)
197 1jcn_A Inosine monophosphate d 36.3 3.8E+02 0.013 28.4 13.7 43 196-238 257-301 (514)
198 1qpo_A Quinolinate acid phosph 35.7 93 0.0032 30.9 7.9 58 253-327 180-237 (284)
199 3ovp_A Ribulose-phosphate 3-ep 35.6 80 0.0027 30.2 7.3 98 371-497 18-125 (228)
200 1ep3_A Dihydroorotate dehydrog 35.5 2E+02 0.0068 28.1 10.6 45 227-280 91-137 (311)
201 2c6q_A GMP reductase 2; TIM ba 35.3 3.7E+02 0.013 27.2 12.9 64 197-274 121-188 (351)
202 1yad_A Regulatory protein TENI 34.7 2.8E+02 0.0095 25.6 13.8 33 199-231 35-68 (221)
203 3vnd_A TSA, tryptophan synthas 34.2 3.4E+02 0.012 26.4 15.1 91 195-292 34-147 (267)
204 3uhf_A Glutamate racemase; str 34.2 62 0.0021 32.0 6.4 47 186-237 66-114 (274)
205 3r2g_A Inosine 5'-monophosphat 34.1 1.2E+02 0.004 31.3 8.6 44 195-238 101-146 (361)
206 4gj1_A 1-(5-phosphoribosyl)-5- 34.0 2.2E+02 0.0075 27.2 10.3 102 197-304 88-205 (243)
207 3out_A Glutamate racemase; str 33.5 47 0.0016 32.7 5.3 47 186-237 49-98 (268)
208 2y5s_A DHPS, dihydropteroate s 33.3 28 0.00096 34.9 3.7 96 470-570 45-151 (294)
209 4g9p_A 4-hydroxy-3-methylbut-2 33.3 87 0.003 32.7 7.4 47 196-243 41-91 (406)
210 2qjg_A Putative aldolase MJ040 33.2 79 0.0027 30.6 7.0 38 367-404 163-200 (273)
211 1oy0_A Ketopantoate hydroxymet 32.9 3.7E+02 0.013 26.5 16.3 35 370-405 179-213 (281)
212 3gnn_A Nicotinate-nucleotide p 32.3 47 0.0016 33.4 5.1 39 199-240 222-260 (298)
213 1u1j_A 5-methyltetrahydroptero 32.2 4E+02 0.014 30.1 13.5 80 187-278 180-270 (765)
214 1thf_D HISF protein; thermophI 32.2 2.8E+02 0.0096 26.0 10.7 44 197-243 87-132 (253)
215 2gzm_A Glutamate racemase; enz 31.8 43 0.0015 32.8 4.7 47 186-237 45-93 (267)
216 1rd5_A Tryptophan synthase alp 31.6 3.4E+02 0.012 25.8 13.9 22 484-505 201-222 (262)
217 1zuw_A Glutamate racemase 1; ( 31.5 49 0.0017 32.5 5.1 47 186-237 45-94 (272)
218 1o66_A 3-methyl-2-oxobutanoate 31.5 33 0.0011 34.0 3.8 40 193-237 161-200 (275)
219 1w3i_A EDA, 2-keto-3-deoxy glu 31.1 1.3E+02 0.0044 29.7 8.2 105 471-577 20-144 (293)
220 1dqu_A Isocitrate lyase; beta 31.0 39 0.0013 36.7 4.5 63 302-384 387-451 (538)
221 4ef8_A Dihydroorotate dehydrog 30.9 77 0.0026 32.5 6.6 54 343-410 126-193 (354)
222 1gte_A Dihydropyrimidine dehyd 30.9 2.2E+02 0.0074 33.4 11.3 120 196-387 557-732 (1025)
223 3tr9_A Dihydropteroate synthas 30.7 4.2E+02 0.015 26.5 13.6 164 158-407 27-223 (314)
224 3r12_A Deoxyribose-phosphate a 30.4 1.1E+02 0.0038 30.0 7.3 25 38-62 172-197 (260)
225 3tsm_A IGPS, indole-3-glycerol 30.4 1.7E+02 0.0058 28.8 8.8 63 198-276 134-197 (272)
226 3fok_A Uncharacterized protein 30.1 4.3E+02 0.015 26.4 14.8 27 366-392 196-226 (307)
227 1x1o_A Nicotinate-nucleotide p 29.9 2.5E+02 0.0084 27.8 10.0 86 254-389 182-267 (286)
228 2b7n_A Probable nicotinate-nuc 29.9 1.6E+02 0.0056 28.8 8.6 90 253-389 167-256 (273)
229 1rpx_A Protein (ribulose-phosp 29.3 2.2E+02 0.0075 26.5 9.3 85 196-292 26-117 (230)
230 1pv8_A Delta-aminolevulinic ac 29.3 28 0.00094 35.3 2.8 25 35-59 294-318 (330)
231 3c2e_A Nicotinate-nucleotide p 29.2 35 0.0012 34.2 3.6 24 204-228 217-240 (294)
232 2dqw_A Dihydropteroate synthas 29.0 46 0.0016 33.3 4.4 91 471-570 52-158 (294)
233 1rqb_A Transcarboxylase 5S sub 28.9 2.9E+02 0.0098 30.0 11.0 89 199-292 123-216 (539)
234 1ep3_A Dihydroorotate dehydrog 28.8 4.1E+02 0.014 25.7 14.1 70 195-274 113-195 (311)
235 1w1z_A Delta-aminolevulinic ac 28.7 29 0.00098 35.1 2.8 25 35-59 294-318 (328)
236 1i4n_A Indole-3-glycerol phosp 28.7 2.1E+02 0.0072 27.7 9.1 63 198-276 115-179 (251)
237 1qap_A Quinolinic acid phospho 28.7 2E+02 0.0069 28.6 9.1 54 254-324 195-248 (296)
238 2hsa_B 12-oxophytodienoate red 28.1 4.1E+02 0.014 27.4 11.8 158 189-387 50-283 (402)
239 2gou_A Oxidoreductase, FMN-bin 27.9 4.3E+02 0.015 26.8 11.8 92 185-276 150-271 (365)
240 1h7n_A 5-aminolaevulinic acid 27.7 29 0.00097 35.3 2.5 25 35-59 305-329 (342)
241 1l6s_A Porphobilinogen synthas 27.4 29 0.001 34.9 2.5 25 35-59 287-311 (323)
242 2vc6_A MOSA, dihydrodipicolina 27.3 4.4E+02 0.015 25.7 14.6 46 37-88 19-64 (292)
243 1x1o_A Nicotinate-nucleotide p 27.3 90 0.0031 31.0 6.2 36 202-240 212-247 (286)
244 3qze_A DHDPS, dihydrodipicolin 27.1 4.7E+02 0.016 25.9 14.9 45 37-88 42-87 (314)
245 3ixl_A Amdase, arylmalonate de 26.9 4.1E+02 0.014 25.1 11.8 53 185-237 42-102 (240)
246 1vzw_A Phosphoribosyl isomeras 26.8 1.7E+02 0.0058 27.5 8.0 99 197-304 88-199 (244)
247 1zfj_A Inosine monophosphate d 26.8 4.4E+02 0.015 27.6 12.1 42 196-237 235-278 (491)
248 1oy0_A Ketopantoate hydroxymet 26.7 60 0.0021 32.3 4.7 41 192-237 178-218 (281)
249 3eez_A Putative mandelate race 26.6 4.5E+02 0.015 26.7 11.8 44 366-409 143-186 (378)
250 3obk_A Delta-aminolevulinic ac 26.2 34 0.0011 34.9 2.8 25 35-59 308-332 (356)
251 3tn4_A Phosphotriesterase; lac 26.1 4.4E+02 0.015 26.8 11.5 52 187-239 77-129 (360)
252 1ujp_A Tryptophan synthase alp 25.5 3.6E+02 0.012 26.2 10.2 88 197-292 34-143 (271)
253 2ovl_A Putative racemase; stru 25.5 4.9E+02 0.017 26.1 11.8 42 368-409 146-188 (371)
254 1m3u_A 3-methyl-2-oxobutanoate 25.4 4.8E+02 0.016 25.4 13.4 36 201-240 102-137 (264)
255 3ngj_A Deoxyribose-phosphate a 25.1 1.5E+02 0.0051 28.7 7.1 25 38-62 156-181 (239)
256 4a29_A Engineered retro-aldol 24.9 99 0.0034 30.3 5.8 58 203-276 123-181 (258)
257 2jfq_A Glutamate racemase; cel 24.8 57 0.002 32.3 4.2 49 186-237 64-112 (286)
258 3t7v_A Methylornithine synthas 24.5 1.6E+02 0.0056 29.4 7.8 76 197-279 153-241 (350)
259 2vp8_A Dihydropteroate synthas 24.3 5.5E+02 0.019 25.7 12.1 45 158-213 41-85 (318)
260 1w5q_A Delta-aminolevulinic ac 23.8 37 0.0013 34.4 2.5 24 35-59 301-324 (337)
261 2ehh_A DHDPS, dihydrodipicolin 23.4 5.2E+02 0.018 25.2 14.4 45 37-88 19-64 (294)
262 3gnn_A Nicotinate-nucleotide p 23.3 1.7E+02 0.0059 29.2 7.3 56 253-325 195-250 (298)
263 3khj_A Inosine-5-monophosphate 23.0 2.3E+02 0.0078 29.0 8.5 43 196-238 107-150 (361)
264 3dz1_A Dihydrodipicolinate syn 22.6 5.6E+02 0.019 25.2 11.8 45 37-88 27-72 (313)
265 3m6y_A 4-hydroxy-2-oxoglutarat 22.3 5.5E+02 0.019 25.0 10.3 136 86-291 123-269 (275)
266 1tqj_A Ribulose-phosphate 3-ep 22.3 2.6E+02 0.0089 26.3 8.3 93 196-300 20-119 (230)
267 2jbm_A Nicotinate-nucleotide p 22.2 1.5E+02 0.0051 29.5 6.8 58 254-327 183-240 (299)
268 2ojp_A DHDPS, dihydrodipicolin 22.1 5.5E+02 0.019 25.0 13.9 45 37-88 20-65 (292)
269 1tx2_A DHPS, dihydropteroate s 22.1 82 0.0028 31.5 4.7 26 471-496 63-89 (297)
270 3b4u_A Dihydrodipicolinate syn 22.0 5.6E+02 0.019 25.0 13.1 44 37-87 22-66 (294)
271 1tx2_A DHPS, dihydropteroate s 21.7 2.3E+02 0.008 28.1 8.0 46 158-214 39-84 (297)
272 1ur1_A Endoxylanase; hydrolase 21.7 1.9E+02 0.0064 29.8 7.6 50 193-243 209-266 (378)
273 3a5f_A Dihydrodipicolinate syn 21.6 5.6E+02 0.019 24.9 12.7 45 37-88 20-65 (291)
274 1ur4_A Galactanase; hydrolase, 21.5 6.4E+02 0.022 26.0 11.7 109 188-311 136-264 (399)
275 3tsm_A IGPS, indole-3-glycerol 21.3 4.3E+02 0.015 25.8 9.8 35 199-237 85-124 (272)
276 3oix_A Putative dihydroorotate 21.2 4.8E+02 0.016 26.4 10.5 68 195-270 143-222 (345)
277 1wbh_A KHG/KDPG aldolase; lyas 21.1 5E+02 0.017 24.1 13.7 17 196-212 31-47 (214)
278 3flu_A DHDPS, dihydrodipicolin 21.0 5.9E+02 0.02 24.9 14.8 45 37-88 26-71 (297)
279 1ydo_A HMG-COA lyase; TIM-barr 20.9 6.1E+02 0.021 25.0 20.1 42 367-408 154-198 (307)
280 3zwt_A Dihydroorotate dehydrog 20.8 6.7E+02 0.023 25.4 12.7 28 380-407 317-347 (367)
281 2nu8_B SCS-beta, succinyl-COA 20.8 2E+02 0.0069 29.7 7.6 65 185-261 292-361 (388)
282 3r89_A Orotidine 5'-phosphate 20.6 3.6E+02 0.012 26.7 9.1 127 368-527 104-241 (290)
283 2r8w_A AGR_C_1641P; APC7498, d 20.5 6.4E+02 0.022 25.1 14.9 45 37-88 53-98 (332)
284 1qap_A Quinolinic acid phospho 20.3 1.3E+02 0.0045 29.9 5.9 23 203-226 225-247 (296)
285 4e38_A Keto-hydroxyglutarate-a 20.3 5.6E+02 0.019 24.3 10.2 88 197-305 97-184 (232)
286 3ivs_A Homocitrate synthase, m 20.2 7.5E+02 0.026 25.7 19.6 42 367-408 177-221 (423)
287 3tak_A DHDPS, dihydrodipicolin 20.1 6E+02 0.021 24.7 14.7 45 37-88 20-65 (291)
288 3oa3_A Aldolase; structural ge 20.1 3.7E+02 0.013 26.6 9.0 28 34-62 184-212 (288)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=6.1e-60 Score=503.83 Aligned_cols=317 Identities=20% Similarity=0.241 Sum_probs=253.1
Q ss_pred ceEEEeccHHHHHHhccCCCCCCCCCcchhhhccCHHHHHHHHHHHHHHhcceeeccccccChhchhhhcCCCh---HHH
Q psy17603 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDY---DSS 79 (591)
Q Consensus 3 ~~lilDGg~gT~L~~~~g~~~~~~~lWs~~~l~~~Pe~v~~vH~~yl~AGAdiI~TnTy~as~~~l~~~~g~~~---~~~ 79 (591)
+++||||||||+|+++ |++. .++|++++|+++||+|++||++|++||||||+|||||+|+.+|.++ |++. +++
T Consensus 21 ~ilIlDGgmGT~L~~~-G~~~--~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~-G~~~~~~~~~ 96 (406)
T 1lt8_A 21 EIVIGDGGFVFALEKR-GYVK--AGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENR-GNYVLEKISG 96 (406)
T ss_dssp CCEECCCCHHHHHHHH-TSSC--TTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC--------------C
T ss_pred CEEEEeCccchHHHHC-CCCC--CcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhc-CCccchhHHH
Confidence 3899999999999999 9875 3699999999999999999999999999999999999999999885 8753 568
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCccccccccccCCCCCccCCCCcccCccchhhhhhhHhhhhccccCCCCcce
Q psy17603 80 YQLIKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDI 159 (591)
Q Consensus 80 ~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~va~~~gp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (591)
++||++||+|||+|+++ .++
T Consensus 97 ~eln~~Av~LAreAa~~------------------------------------------------------------~~~ 116 (406)
T 1lt8_A 97 QEVNEAAADIARQVADE------------------------------------------------------------GDA 116 (406)
T ss_dssp HHHHHHHHHHHHHHHTT------------------------------------------------------------TTC
T ss_pred HHHHHHHHHHHHHHHhc------------------------------------------------------------CCC
Confidence 89999999999999854 127
Q ss_pred eEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEE
Q psy17603 160 LIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239 (591)
Q Consensus 160 ~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vS 239 (591)
+|||||||||+++ ..+++++++++|++|+++|+++|||+|++|||+++.|++++++++++ .++|+|||
T Consensus 117 ~VAGsIGP~g~~l-----------~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS 184 (406)
T 1lt8_A 117 LVAGGVSQTPSYL-----------SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAAT 184 (406)
T ss_dssp EEEEEECCCHHHH-----------TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEE
T ss_pred EEEEEcCCccccc-----------CCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEE
Confidence 8999999998754 24789999999999999999999999999999999999999999997 47999999
Q ss_pred EEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC-CchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHH
Q psy17603 240 FSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV-RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEA 318 (591)
Q Consensus 240 f~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~-~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~ 318 (591)
|+|.++|+ ++|+++.+++..+.. .++++|||||+ +|+.|.++++.+.+..
T Consensus 185 ~T~~~~G~-l~G~~~~~~~~~l~~---~~~~avGvNC~~gP~~~~~~l~~l~~~~------------------------- 235 (406)
T 1lt8_A 185 MAIGPEGD-LHGVPPGEAAVRLVK---AGASIIGVNCHFDPTISLKTVKLMKEGL------------------------- 235 (406)
T ss_dssp ECCBTTBC-TTCCCHHHHHHHHHT---TTCSEEEEESSSCHHHHHHHHHHHHHHH-------------------------
T ss_pred EEECCCCC-cCCCcHHHHHHHhhc---CCCCEEEecCCCCHHHHHHHHHHHHHhh-------------------------
Confidence 99998999 899999999998843 45899999995 8999999999886530
Q ss_pred HHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecC------CCChH-----HHHHHHHHHHhcCCcEE
Q psy17603 319 QMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWID------RDLCE-----PVDKYVTDWLDEGVALV 387 (591)
Q Consensus 319 ~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~------~~~~~-----~~~~~~~~~~~~Gv~~V 387 (591)
.. ...+.||++|||+|..+|...+.|.. ..+|. ++++++++|.+.|+++|
T Consensus 236 -------~~------------~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iI 296 (406)
T 1lt8_A 236 -------EA------------AQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI 296 (406)
T ss_dssp -------HT------------TTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEE
T ss_pred -------hh------------cCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 00 01147999999997766543334542 23343 58999999999999999
Q ss_pred eecCCCCHHHHHHHHHHhhhcccCccccccccccCCCCc-hhhhhhhCCcchhhcchhhhh
Q psy17603 388 GGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLW-SSYFLATAKDAVVQTHRDFIK 447 (591)
Q Consensus 388 GgcCgtgP~~i~~l~~~l~~~~~~~~~~~pd~~~~~plw-s~~~~~~~P~~~~~~h~~~i~ 447 (591)
||||||+|+||++|++.++...+.. .|... .+.+| |..=++..|+.-....++|..
T Consensus 297 GGCCGTtPeHI~aia~~l~~~~~~~---~~~~~-~~~~~~sGLe~l~~~~~~~~~~~~~~~ 353 (406)
T 1lt8_A 297 GGCCGFEPYHIRAIAEELAPERGFL---PPASE-KHGSWGSGLDMHTKPWVRARARKEYWE 353 (406)
T ss_dssp CCCTTCCHHHHHHHHHHTHHHHSCC---CGGGG-GSCSTTGGGGGCSSHHHHTTCCHHHHH
T ss_pred EEecCCCHHHHHHHHHHHhccCCCC---CCCcc-CCCCCCccccccCChHHHHHhHHHHHh
Confidence 9999999999999999998765321 11222 23334 445556688776666677754
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=2.6e-58 Score=512.36 Aligned_cols=410 Identities=19% Similarity=0.217 Sum_probs=302.3
Q ss_pred ceEEEeccHHHHHHhccCCCCCCCCCcchhhhccCHHHHHHHHHHHHHHhcceeeccccccChhchhhhcCCChHHHHHH
Q psy17603 3 NVKLIDGGFSSQLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQL 82 (591)
Q Consensus 3 ~~lilDGg~gT~L~~~~g~~~~~~~lWs~~~l~~~Pe~v~~vH~~yl~AGAdiI~TnTy~as~~~l~~~~g~~~~~~~~l 82 (591)
+++||||||||+|+++ |++.. .++| ++++||+|+++|++|++||||||+|||||+|+.+|.++ |+ .++++++
T Consensus 14 ~ililDGamGT~L~~~-g~~~~-~el~----~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~-g~-~~~~~el 85 (566)
T 1q7z_A 14 RVLLLDGAYGTEFMKY-GYDDL-PEEL----NIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKH-GL-EDKLDPI 85 (566)
T ss_dssp CCEECCCCSHHHHHHT-TCCSC-GGGH----HHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGG-TC-GGGHHHH
T ss_pred CeEEEEChHHHHHHHC-CCCCC-chhh----cccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhc-Cc-hHHHHHH
Confidence 5899999999999998 98752 4555 59999999999999999999999999999999999985 99 5899999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCccccccccccCCCCCccCCCCcccCccchhhhhhhHhhhhccccCCCCcceeEe
Q psy17603 83 IKSSVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIA 162 (591)
Q Consensus 83 ~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~va~~~gp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Va 162 (591)
|++||+|||+|+++ + +||
T Consensus 86 ~~~av~lAr~a~~~-------------------------------------------------------------~-~VA 103 (566)
T 1q7z_A 86 VRNAVRIARRAAGE-------------------------------------------------------------K-LVF 103 (566)
T ss_dssp HHHHHHHHHHHHTT-------------------------------------------------------------S-EEE
T ss_pred HHHHHHHHHHHHhC-------------------------------------------------------------C-eEE
Confidence 99999999999742 2 799
Q ss_pred eccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHh-cCCCceEEEEE
Q psy17603 163 GSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFS 241 (591)
Q Consensus 163 gsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~-~~~~pv~vSf~ 241 (591)
|||||||+.+++ | ..+++++++++|++|+++|+++|||+|++|||+++.|++++++++++ ++++|+|+||+
T Consensus 104 GsiGP~g~~~~~-------~-~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t 175 (566)
T 1q7z_A 104 GDIGPTGELPYP-------L-GSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMT 175 (566)
T ss_dssp EEECCCSCCBTT-------T-SSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred EeCCCcccCCCC-------C-CCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 999999987632 2 25799999999999999999999999999999999999999999997 57999999999
Q ss_pred ecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC-CCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHH
Q psy17603 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC-VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQM 320 (591)
Q Consensus 242 ~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC-~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~ 320 (591)
|.++|++++|+++++++..+.. .++++||+|| ++|+.+.++++.+...
T Consensus 176 ~~~~g~~~~G~~~~~~~~~l~~---~~~~avG~NC~~gp~~~~~~l~~l~~~---------------------------- 224 (566)
T 1q7z_A 176 FDEKGRSLTGTDPANFAITFDE---LDIDALGINCSLGPEEILPIFQELSQY---------------------------- 224 (566)
T ss_dssp CCTTSCCTTSCCHHHHHHHHHT---SSCSEEEEESSSCHHHHHHHHHHHHHT----------------------------
T ss_pred EcCCCeeCCCCcHHHHHHHhhc---cCCCEEEEeCCCCHHHHHHHHHHHHhc----------------------------
Confidence 9999999999999999998843 5799999999 5899999999998754
Q ss_pred HHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHH
Q psy17603 321 LCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLH 400 (591)
Q Consensus 321 a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~ 400 (591)
.++|+++|||+|.++.. +++..+..+|++|++++++|.+.|+++|||||||+|+||++
T Consensus 225 ---------------------~~~p~~vyPNaG~p~~~-~~~~~~~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~a 282 (566)
T 1q7z_A 225 ---------------------TDKFLVVEPNAGKPIVE-NGKTVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKL 282 (566)
T ss_dssp ---------------------CCSEEEEECCSSSCEEE-TTEEECCCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHH
T ss_pred ---------------------CCCEEEEEcCCCCCccc-CCccccCCCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHH
Confidence 15799999999988632 45555667899999999999999999999999999999999
Q ss_pred HHHHhhhcccCccccccccccCCCCc-hh---hhhhhCCcchhhcchhhhhCCCCc-cc-ccccCCCCcccccCCcchhH
Q psy17603 401 MKHRLDDWVSGLSTYVGDIIDGHPLW-SS---YFLATAKDAVVQTHRDFIKGSQTN-DF-LRDYNSPNLWIDRDLCEPVD 474 (591)
Q Consensus 401 l~~~l~~~~~~~~~~~pd~~~~~plw-s~---~~~~~~P~~~~~~h~~~i~aG~~v-~~-~~~y~~~~~~l~~~~~e~~a 474 (591)
|++.++...+...... .+.+ ++ .+.+..|- .-|-.+ .+ ..+|... ......+...
T Consensus 283 ia~~~~~~~p~~~~~~------~~~~~~s~~~~~~~~~~~----------iiGer~N~Tg~dsf~~~---~~~~~~~~a~ 343 (566)
T 1q7z_A 283 FRKVLGNRKPLQRKKK------RIFAVSSPSKLVTFDHFV----------VIGERINPAGRKKLWAE---MQKGNEEIVI 343 (566)
T ss_dssp HHHHHCSCCCCCCCCC------CCCEEECSSCEEESSSCE----------EEEEEECCTTCHHHHHH---HHTTCCHHHH
T ss_pred HHHHhcCCCCCCcccC------ccceecCCceeeccccce----------EEEEEecCCCChhHHHH---hhcCCHHHHH
Confidence 9999987654211100 0011 11 00111111 112101 00 1111100 0011234456
Q ss_pred HHHHHHHHcCCcEEE-eecCCc----HHHHHHHHhccccc-CC---CCCCCCCcHHHHHHHhhhcCCCCeeEEEEcCCCh
Q psy17603 475 KYVTDWLDEGVALVG-GCCRTY----AEDTLHMKHRLDDW-DD---KHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP 545 (591)
Q Consensus 475 ~~~~~~~~~G~~~vg-GCcgtt----p~~i~~l~~~~~~~-d~---~~l~dG~~l~~~~~~~~~~~~~~~~avGiNC~~p 545 (591)
+.++++++.|+.+|= | .|.. +++++.+-+.+... +- -.+.+-+-++.+++.+ ..... ||=++.
T Consensus 344 ~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~----~G~~i---INdis~ 415 (566)
T 1q7z_A 344 KEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAY----PGRSL---FNSAKV 415 (566)
T ss_dssp HHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHC----SSCCE---EEEEES
T ss_pred HHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhc----CCCCE---EEECCc
Confidence 677888899998887 4 4542 55665544443211 11 1133444444444442 12112 555222
Q ss_pred --hhHHHHHHHhhhcCCcEEEecCCCC
Q psy17603 546 --LMVSPLIEQLKTENIPLVVYPNSGE 570 (591)
Q Consensus 546 --~~v~~~i~~l~~~~~pl~vYPNsG~ 570 (591)
+.+..+++..++.+.|++++++.|.
T Consensus 416 ~~~~~~~~~~~~~~~g~~vV~m~~~~~ 442 (566)
T 1q7z_A 416 DEEELEMKINLLKKYGGTLIVLLMGKD 442 (566)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEESCSSS
T ss_pred chhhHHHHHHHHHHhCCeEEEEeCCCC
Confidence 2235556666667899999998874
No 3
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=99.96 E-value=4.6e-29 Score=277.48 Aligned_cols=232 Identities=15% Similarity=0.155 Sum_probs=169.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHH--------------HHHHHHHHHhcCCCceEEEEEecCCCcccCC-
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKE--------------AQMLCRLLREWPHQKAWLSFSCKDDKHISNG- 251 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~E--------------a~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G- 251 (591)
.++.+++.|+ .|+++|+|+|.++||....+ .+.+++.+|+..+.+ +|..+++|.+....+
T Consensus 42 ~Pe~V~~iH~----~Yl~AGAdii~TnTf~a~~~~l~~~g~~~~~~el~~~av~lAr~a~~~~-~VAGsiGP~g~~~~~~ 116 (566)
T 1q7z_A 42 APDVVLKVHR----SYIESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEK-LVFGDIGPTGELPYPL 116 (566)
T ss_dssp CHHHHHHHHH----HHHHHTCSEEECSCTTCSHHHHGGGTCGGGHHHHHHHHHHHHHHHHTTS-EEEEEECCCSCCBTTT
T ss_pred CHHHHHHHHH----HHHHhhcceeecCcccCCHHHHHhcCchHHHHHHHHHHHHHHHHHHhCC-eEEEeCCCcccCCCCC
Confidence 6899999999 67899999999999987532 244555565433335 999999998875321
Q ss_pred --CCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhc-
Q psy17603 252 --ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREW- 328 (591)
Q Consensus 252 --~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~- 328 (591)
.+++++.+.. .+|+.+|.++|+|+|++|||+|+.|+++++.++++.
T Consensus 117 ~~~~~~e~~~~~-------------------------------~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~ 165 (566)
T 1q7z_A 117 GSTLFEEFYENF-------------------------------RETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVS 165 (566)
T ss_dssp SSBCHHHHHHHH-------------------------------HHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHH-------------------------------HHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhC
Confidence 2333332221 235556677999999999999999999999999984
Q ss_pred cccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHHhhhc
Q psy17603 329 PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW 408 (591)
Q Consensus 329 ~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~l~~~ 408 (591)
+..|.|+||++.. +|++..|++++++...+ .+.|+++||.||+++|++|.++++.+...
T Consensus 166 ~~~Pv~vS~t~~~------------------~g~~~~G~~~~~~~~~l---~~~~~~avG~NC~~gp~~~~~~l~~l~~~ 224 (566)
T 1q7z_A 166 RDVFLIAHMTFDE------------------KGRSLTGTDPANFAITF---DELDIDALGINCSLGPEEILPIFQELSQY 224 (566)
T ss_dssp SSSCEEEEECCCT------------------TSCCTTSCCHHHHHHHH---HTSSCSEEEEESSSCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEEEEcC------------------CCeeCCCCcHHHHHHHh---hccCCCEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5567777776532 45666677666666554 46899999999999999999999999765
Q ss_pred ccCccccccccccCCCCchhhhhhhCCcchhhcchhhhhCCCCcccccccCCCCcccccCCcchhHHHHHHHHHcCCcEE
Q psy17603 409 VSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALV 488 (591)
Q Consensus 409 ~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~~h~~~i~aG~~v~~~~~y~~~~~~l~~~~~e~~a~~~~~~~~~G~~~v 488 (591)
+.. |+ ++++|++.|.. . +....|.. ++++|++++++|++.|+++|
T Consensus 225 ~~~------------p~-~vyPNaG~p~~---------~-----~~~~~~~~--------~p~~~a~~~~~~~~~G~~ii 269 (566)
T 1q7z_A 225 TDK------------FL-VVEPNAGKPIV---------E-----NGKTVYPL--------KPHDFAVHIDSYYELGVNIF 269 (566)
T ss_dssp CCS------------EE-EEECCSSSCEE---------E-----TTEEECCC--------CHHHHHTTHHHHHHTTCSEE
T ss_pred CCC------------EE-EEEcCCCCCcc---------c-----CCccccCC--------CHHHHHHHHHHHHHcCCcEE
Confidence 431 21 22233333321 0 12334543 45779999999999999999
Q ss_pred EeecCCcHHHHHHHHhcccccC
Q psy17603 489 GGCCRTYAEDTLHMKHRLDDWD 510 (591)
Q Consensus 489 gGCcgttp~~i~~l~~~~~~~d 510 (591)
||||||||+||++|++.++...
T Consensus 270 GGCCGTtP~hI~aia~~~~~~~ 291 (566)
T 1q7z_A 270 GGCCGTTPEHVKLFRKVLGNRK 291 (566)
T ss_dssp CCCTTCCHHHHHHHHHHHCSCC
T ss_pred ccccCCCHHHHHHHHHHhcCCC
Confidence 9999999999999999987663
No 4
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=99.95 E-value=1.6e-28 Score=261.89 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=163.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccCCHH-----------------H-HHHHHHHHHhcC-CCceEEEEEecCCCc
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIPASK-----------------E-AQMLCRLLREWP-HQKAWLSFSCKDDKH 247 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~-----------------E-a~aa~~a~~~~~-~~pv~vSf~~~~~g~ 247 (591)
.++.+++.|+ .|+++|+|+|.++||.... | .+.+++.+|+.. ..+++|..+++|.|.
T Consensus 52 ~Pe~V~~iH~----~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHR----EFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHH----HHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH
T ss_pred CHHHHHHHHH----HHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc
Confidence 6789999999 6889999999999998521 1 244555555432 347899999999876
Q ss_pred ccCCCCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhh
Q psy17603 248 ISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLRE 327 (591)
Q Consensus 248 l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~ 327 (591)
.....+++++.+.. .+|+.+|+++|||+|++|||+|+.|++++++++++
T Consensus 128 ~l~~~s~eel~~~~-------------------------------~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~ 176 (406)
T 1lt8_A 128 YLSAKSETEVKKVF-------------------------------LQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA 176 (406)
T ss_dssp HHTTCHHHHHHHHH-------------------------------HHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGG
T ss_pred ccCCCCHHHHHHHH-------------------------------HHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHH
Confidence 55444444433322 23455566789999999999999999999999987
Q ss_pred ccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHHhhh
Q psy17603 328 WPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDD 407 (591)
Q Consensus 328 ~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~l~~ 407 (591)
.. .|+|+||++. .+|+ ..|++++.+...+ .+.|+++||+||+++|++|..+++.|+.
T Consensus 177 ~~-lPv~iS~T~~------------------~~G~-l~G~~~~~~~~~l---~~~~~~avGvNC~~gP~~~~~~l~~l~~ 233 (406)
T 1lt8_A 177 SG-KPVAATMAIG------------------PEGD-LHGVPPGEAAVRL---VKAGASIIGVNCHFDPTISLKTVKLMKE 233 (406)
T ss_dssp GT-SCEEEEECCB------------------TTBC-TTCCCHHHHHHHH---HTTTCSEEEEESSSCHHHHHHHHHHHHH
T ss_pred hC-CcEEEEEEEC------------------CCCC-cCCCcHHHHHHHh---hcCCCCEEEecCCCCHHHHHHHHHHHHH
Confidence 53 4555555542 1344 5666666665544 5679999999999999999999999986
Q ss_pred cccCccccccccccCCCCchhhhhhhCCcchhhcchhhhhCCCCcccccccCCCCcccccCCcc-----hhHHHHHHHHH
Q psy17603 408 WVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRDYNSPNLWIDRDLCE-----PVDKYVTDWLD 482 (591)
Q Consensus 408 ~~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~~h~~~i~aG~~v~~~~~y~~~~~~l~~~~~e-----~~a~~~~~~~~ 482 (591)
....... ..| ++.+||....+| .| ++.|...+.+--..+++ +|++++++|.+
T Consensus 234 ~~~~~g~-------~~p------l~vyPNag~~~~-----~~-----~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~ 290 (406)
T 1lt8_A 234 GLEAAQL-------KAH------LMSQPLAYHTPD-----AN-----KQGFIDLPEFPFGLEPRVATRWDIQKYAREAYN 290 (406)
T ss_dssp HHHTTTC-------CCE------EEEECCSBCCTT-----CC-----TTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHH
T ss_pred hhhhcCC-------Ccc------EEEecCCCCCCc-----CC-----cccccCCccccccCCHHHHHHHHHHHHHHHHHh
Confidence 5310000 012 334454332222 11 12222111110011222 48999999999
Q ss_pred cCCcEEEeecCCcHHHHHHHHhccccc
Q psy17603 483 EGVALVGGCCRTYAEDTLHMKHRLDDW 509 (591)
Q Consensus 483 ~G~~~vgGCcgttp~~i~~l~~~~~~~ 509 (591)
.|+++|||||||||+||++|++.++..
T Consensus 291 ~Ga~iIGGCCGTtPeHI~aia~~l~~~ 317 (406)
T 1lt8_A 291 LGVRYIGGCCGFEPYHIRAIAEELAPE 317 (406)
T ss_dssp HTEEEECCCTTCCHHHHHHHHHHTHHH
T ss_pred CCCeEEEEecCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999988644
No 5
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=93.60 E-value=0.75 Score=48.79 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=56.2
Q ss_pred hHHHHHHHHhcCCceEEecCCCCccceeecc-cccHHHHHHHHHHhh-ccccccccccccCCCCcceEEecCCCcceecc
Q psy17603 282 VSSLIEQLKTENIPLVVYPNSGEHILAIETI-PASKEAQMLCRLLRE-WPNQKAWLSFSCKTENIPLVVYPNSGERYDAV 359 (591)
Q Consensus 282 i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~-~d~~E~~~a~~~~~~-~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~ 359 (591)
+...|+.... |.+ |+|+|++||. +|++|++...+.++. .| .++++|+.. ..|
T Consensus 265 ld~AI~Ra~A-------Y~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P--------------~~~L~~~~s-Psf--- 318 (433)
T 3eol_A 265 IEPCIARAIA-------YAP-YCDLIWMETSKPDLAQARRFAEAVHKAHP--------------GKLLAYNCS-PSF--- 318 (433)
T ss_dssp HHHHHHHHHH-------HGG-GCSEEEECCSSCCHHHHHHHHHHHHHHST--------------TCCEEEECC-SSS---
T ss_pred HHHHHHHHHH-------HHh-cCCEEEEeCCCCCHHHHHHHHHHhcccCC--------------CcccccCCC-CCC---
Confidence 4555555443 456 9999999997 799999999998875 32 334555432 223
Q ss_pred CCeecCCCChHHHHHHHHHHHhcCCcEEeecC
Q psy17603 360 NARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391 (591)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcC 391 (591)
.|....+++++..+.+++.++|+..+=.-.
T Consensus 319 --nw~~~~~~~~~~~f~~eLa~lGv~~v~~~~ 348 (433)
T 3eol_A 319 --NWKKNLDDATIAKFQRELGAMGYKFQFITL 348 (433)
T ss_dssp --CHHHHSCHHHHHHHHHHHHHHTEEEEEETT
T ss_pred --cccccCChhHHhHHHHHHHHcCCeEEEeCc
Confidence 233334567888888889999988877643
No 6
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=93.13 E-value=0.98 Score=47.96 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=90.5
Q ss_pred HHHHHHHHcCCCEEEecccC---------------CHHHH----HHHHHHHHhcCCCceEEEEEecCCCc-cc--CCCCH
Q psy17603 197 PRIQALVEAGADILAIETIP---------------ASKEA----QMLCRLLREWPHQKAWLSFSCKDDKH-IS--NGESF 254 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~---------------~~~Ea----~aa~~a~~~~~~~pv~vSf~~~~~g~-l~--~G~~~ 254 (591)
+.++.|.++||-.|-+|-.- ...|+ ++++.+.+.. +.+++|.--.+.... +. +..+
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~-g~d~~IiARTDa~~a~l~~s~~d~- 248 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVM-GTPTVLVARTDAEAADLITSDIDD- 248 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEECTTTCCEESCCCCT-
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhc-CCCeEEEEEcCccccccccccccc-
Confidence 45678899999999999643 23443 4444444432 456665554433211 11 1110
Q ss_pred HHHHHHHHhhCCCCeEEEEecCCC-----chhhHHHHHHHHhcCCceEEecCCCCccceeec-ccccHHHHHHHHHHhh-
Q psy17603 255 TQVARTCYNMNPDQLIAVGVNCVR-----PLMVSSLIEQLKTENIPLVVYPNSGEHILAIET-IPASKEAQMLCRLLRE- 327 (591)
Q Consensus 255 ~~~~~~~~~~~~~~~~aiGvNC~~-----p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET-~~d~~E~~~a~~~~~~- 327 (591)
.......|.-... ...+...|+.... |.+ |+|++++|+ .+|.+|++...+.++.
T Consensus 249 -----------~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~A-------Y~~-GAD~if~E~~~~~~eei~~f~~~v~~~ 309 (439)
T 3i4e_A 249 -----------NDKPYLTGERTVEGFFRTKPGLEQAISRGLA-------YAP-YADLIWCETGKPDLEYAKKFAEAIHKQ 309 (439)
T ss_dssp -----------TTGGGEEEEECTTSCEEECCSHHHHHHHHHH-------HTT-TCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred -----------ccchhhcccCcccccccccCCHHHHHHHHHH-------HHh-hCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 0111222321100 1235566666543 456 999999999 5899999999998875
Q ss_pred ccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecC
Q psy17603 328 WPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391 (591)
Q Consensus 328 ~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcC 391 (591)
.| .++++|.... .| .|....+.+.++.+.+++.++|+..+=.-.
T Consensus 310 ~P--------------~~~l~~~~sP-sf-----nw~~~~~~~~~~~f~~eL~~lGv~~v~~~l 353 (439)
T 3i4e_A 310 FP--------------GKLLSYNCSP-SF-----NWKKNLDDATIAKFQKELGAMGYKFQFITL 353 (439)
T ss_dssp ST--------------TCEEEEECCS-SS-----CHHHHSCHHHHHTHHHHHHHHTCCEEEETT
T ss_pred CC--------------ceEEeeCCCC-CC-----cCcccCCHHHHHHHHHHHHHcCCeEEEeCh
Confidence 32 3455654432 23 243345667888888999999998887644
No 7
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=93.05 E-value=0.65 Score=49.23 Aligned_cols=155 Identities=15% Similarity=0.124 Sum_probs=89.7
Q ss_pred HHHHHHHHcCCCEEEecccC---------------CHHHH----HHHHHHHHhcCCCceEEEEEecCCC-ccc-CCCCHH
Q psy17603 197 PRIQALVEAGADILAIETIP---------------ASKEA----QMLCRLLREWPHQKAWLSFSCKDDK-HIS-NGESFT 255 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~---------------~~~Ea----~aa~~a~~~~~~~pv~vSf~~~~~g-~l~-~G~~~~ 255 (591)
+.++.|.++||-.+-+|-.- ...|+ ++++.+.+. .+.+++|.--.+... .+. +-.+.
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~-~~~d~~IiARTDa~aa~l~~s~~d~- 248 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADV-LGVPTLLIARTDADAADLLTSDCDP- 248 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHH-HTCCCEEEEEECTTTCCEESCCCCG-
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHh-cCCCeEEEEEcCCcccccccccccc-
Confidence 45678899999999999643 23443 444444443 245566555444211 111 00000
Q ss_pred HHHHHHHhhCCCCeEEEEecCCC-----chhhHHHHHHHHhcCCceEEecCCCCccceeecc-cccHHHHHHHHHHhh-c
Q psy17603 256 QVARTCYNMNPDQLIAVGVNCVR-----PLMVSSLIEQLKTENIPLVVYPNSGEHILAIETI-PASKEAQMLCRLLRE-W 328 (591)
Q Consensus 256 ~~~~~~~~~~~~~~~aiGvNC~~-----p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~-~d~~E~~~a~~~~~~-~ 328 (591)
. +.....|..... -..+...|+.... |.+ |+|+|++||. +|++|++...+.++. .
T Consensus 249 --------r--D~~fi~G~r~~eG~y~~~~gld~AI~Ra~A-------Y~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~ 310 (435)
T 3lg3_A 249 --------Y--DREFITGDRTAEGFFRTRAGIEQAISRGLA-------YAP-YADLVWCETSTPDLALAKRFADAVHAQF 310 (435)
T ss_dssp --------G--GGGGEEEEECTTCCEEECCSHHHHHHHHHH-------HGG-GCSEEEECCSSCCHHHHHHHHHHHHHHS
T ss_pred --------c--cchhhcccccccccccccCCHHHHHHHHHH-------HHc-cCCEEEecCCCCCHHHHHHHHHHhcccc
Confidence 0 011122221110 0235556665543 456 9999999997 799999999988875 3
Q ss_pred cccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecC
Q psy17603 329 PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCC 391 (591)
Q Consensus 329 ~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcC 391 (591)
| ..+++|... ..| .|....+.+.++.+.+++.++|+..+=.-.
T Consensus 311 P--------------~~~La~~~s-Psf-----nw~~~~~d~~~~~f~~eLa~lG~~~v~~~l 353 (435)
T 3lg3_A 311 P--------------GKLLAYNCS-PSF-----NWKKNLTDQQIASFQDELSAMGYKYQFITL 353 (435)
T ss_dssp T--------------TCEEEEECC-SSS-----CHHHHSCHHHHHHHHHHHHHTTEEEEEETT
T ss_pred C--------------CeEEEeCCC-CCc-----cccccCCHHHHHHHHHHHHHcCCcEEEeCc
Confidence 3 234555433 223 243345668899999999999988877644
No 8
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.01 E-value=6.8 Score=39.50 Aligned_cols=28 Identities=11% Similarity=0.329 Sum_probs=23.8
Q ss_pred ecCCCCccceeec-ccccHHHHHHHHHHh
Q psy17603 299 YPNSGEHILAIET-IPASKEAQMLCRLLR 326 (591)
Q Consensus 299 l~~aG~D~l~iET-~~d~~E~~~a~~~~~ 326 (591)
|.++|+|.+++|+ .+|.++++...+.++
T Consensus 179 y~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 179 YRNAGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp HHHTTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred HHHcCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 4568999999998 799999998887764
No 9
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=88.61 E-value=3.9 Score=43.39 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=88.2
Q ss_pred HHHHHHHHcCCCEEEecccC---------------CHHHH----HHHHHHHHhcCCCceEEEEEecCCC-cccCCCCHHH
Q psy17603 197 PRIQALVEAGADILAIETIP---------------ASKEA----QMLCRLLREWPHQKAWLSFSCKDDK-HISNGESFTQ 256 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~---------------~~~Ea----~aa~~a~~~~~~~pv~vSf~~~~~g-~l~~G~~~~~ 256 (591)
+.++.|.++||-.+-+|-.- ...|. ++++.+.+. .+.+++|.--.+... .+... +
T Consensus 167 ~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~-~g~d~vIiARTDa~~a~li~s-~--- 241 (429)
T 1f8m_A 167 ELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADV-ADVPTVVIARTDAEAATLITS-D--- 241 (429)
T ss_dssp HHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHH-TTCCCEEEEEECTTTCCEESC-C---
T ss_pred HHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHh-cCCCEEEEEEechhhhccccc-c---
Confidence 46778899999999999653 13443 444444433 245655555443211 11100 0
Q ss_pred HHHHHHhhCCCCeEEEEecCCC-----chhhHHHHHHHHhcCCceEEecCCCCccceeec-ccccHHHHHHHHHHhhc-c
Q psy17603 257 VARTCYNMNPDQLIAVGVNCVR-----PLMVSSLIEQLKTENIPLVVYPNSGEHILAIET-IPASKEAQMLCRLLREW-P 329 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC~~-----p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET-~~d~~E~~~a~~~~~~~-~ 329 (591)
+. ........|..... ...+...|+.... |.+ |+|++++|| .+|.+|++...+.++.. |
T Consensus 242 ----~d--~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~A-------Ya~-gAD~if~e~~~~~~eei~~f~~~v~~~~P 307 (429)
T 1f8m_A 242 ----VD--ERDQPFITGERTREGFYRTKNGIEPCIARAKA-------YAP-FADLIWMETGTPDLEAARQFSEAVKAEYP 307 (429)
T ss_dssp ----CS--TTTGGGEEEEECTTSCEEECCSHHHHHHHHHH-------HGG-GCSEEEECCSSCCHHHHHHHHHHHHTTCT
T ss_pred ----cc--ccccccccCCCCcccccccccCHHHHHHHHHH-------HHh-cCCEEEeCCCCCCHHHHHHHHHHhcccCC
Confidence 00 00112223332211 1235666666543 445 899999998 88999999999988742 2
Q ss_pred ccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeec
Q psy17603 330 NQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGC 390 (591)
Q Consensus 330 ~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgc 390 (591)
..+++|+.. ..|+ |....+++.+..+.+++.++|+..+=.-
T Consensus 308 --------------~~~La~n~s-Psf~-----w~~~~~~~~~~~f~~eL~~lG~~~v~~~ 348 (429)
T 1f8m_A 308 --------------DQMLAYNCS-PSFN-----WKKHLDDATIAKFQKELAAMGFKFQFIT 348 (429)
T ss_dssp --------------TCEEEEECC-TTSC-----HHHHCCHHHHHHHHHHHHHHTEEEEEET
T ss_pred --------------CceeecCCC-CCCC-----cccccchhhHhHHHHHHHHcCCeEEEEC
Confidence 114555442 2231 3223456788999999999998666543
No 10
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=86.28 E-value=8.3 Score=41.74 Aligned_cols=43 Identities=35% Similarity=0.460 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHH-hcCCCceEE
Q psy17603 196 RPRIQALVEAGADILAIETIP-ASKEAQMLCRLLR-EWPHQKAWL 238 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~-~~~Ea~aa~~a~~-~~~~~pv~v 238 (591)
.++++.++++|+|+|.+.+-. ........++.++ .+++.|+++
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~ 277 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG 277 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEE
Confidence 356788899999999998643 3334444555555 456889887
No 11
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.25 E-value=12 Score=37.61 Aligned_cols=79 Identities=13% Similarity=0.070 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ +.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 29 ~iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ 95 (301)
T 1xky_A 29 NIDFAKTT----KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHA 95 (301)
T ss_dssp SBCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHH
Confidence 45666644 45557788999987653 322 345666666665532 245777544 2345667
Q ss_pred HHHHHHhhCCCCeEEEEecC
Q psy17603 257 VARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC 276 (591)
+++........+++++.+-.
T Consensus 96 ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcC
Confidence 76665433345666666643
No 12
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=85.24 E-value=29 Score=34.06 Aligned_cols=156 Identities=12% Similarity=0.148 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEE-----EecccCCHHHHHHHHHHHHhc-CCCceEEEEEec-CCCcccCCCCHHHHHH
Q psy17603 187 SEATMAEWHRPRIQALVEAGADIL-----AIETIPASKEAQMLCRLLREW-PHQKAWLSFSCK-DDKHISNGESFTQVAR 259 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i-----~~ET~~~~~Ea~aa~~a~~~~-~~~pv~vSf~~~-~~g~l~~G~~~~~~~~ 259 (591)
+.+++.+. ++.+.+.|+|++ +++.+++..++...+..+++. .++|+++++... +.|+.. +.. +
T Consensus 30 t~~e~l~~----a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~-~~~--~--- 99 (258)
T 4h3d_A 30 NKKDIIKE----AKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKL-ISR--D--- 99 (258)
T ss_dssp SHHHHHHH----HHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCC-CCH--H---
T ss_pred CHHHHHHH----HHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCC-CCH--H---
Confidence 55665443 334567899998 567778888888888888854 578999888543 334432 211 1
Q ss_pred HHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhcccccccccccc
Q psy17603 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339 (591)
Q Consensus 260 ~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~ 339 (591)
.-..+++.+... +++|++-+|-..+.+-.+..+..+++.
T Consensus 100 ---------------------~~~~ll~~~~~~---------~~~d~iDvEl~~~~~~~~~l~~~a~~~----------- 138 (258)
T 4h3d_A 100 ---------------------YYTTLNKEISNT---------GLVDLIDVELFMGDEVIDEVVNFAHKK----------- 138 (258)
T ss_dssp ---------------------HHHHHHHHHHHT---------TCCSEEEEEGGGCHHHHHHHHHHHHHT-----------
T ss_pred ---------------------HHHHHHHHHHhc---------CCchhhHHhhhccHHHHHHHHHHHHhC-----------
Confidence 111223333222 347888888776665556666666543
Q ss_pred CCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCCC-CHHHHHHHHHHhh
Q psy17603 340 KTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT-YAEDTLHMKHRLD 406 (591)
Q Consensus 340 ~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCgt-gP~~i~~l~~~l~ 406 (591)
...+|++... | .++ .+.+++.+.+.+..+.|++++=+.+-. .+++...+.+...
T Consensus 139 ---~~kiI~S~Hd---f---~~T----P~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~ 193 (258)
T 4h3d_A 139 ---EVKVIISNHD---F---NKT----PKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATN 193 (258)
T ss_dssp ---TCEEEEEEEE---S---SCC----CCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred ---CCEEEEEEec---C---CCC----CCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHH
Confidence 2334442110 1 111 112567777788889999998876643 5666666655443
No 13
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=85.17 E-value=14 Score=37.11 Aligned_cols=78 Identities=13% Similarity=0.029 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 29 ~iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~ 95 (306)
T 1o5k_A 29 ELDLESY----ERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEK 95 (306)
T ss_dssp EECHHHH----HHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHH
Confidence 3566654 445567788999987653 322 345666666665532 235777544 2235566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 96 ai~la~~A~~~Gadavlv~ 114 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVV 114 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 6665543333456666554
No 14
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.06 E-value=15 Score=36.32 Aligned_cols=173 Identities=12% Similarity=0.091 Sum_probs=95.9
Q ss_pred CcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeec----------------------CCCCHHHHHH
Q psy17603 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGC----------------------CRTYAEDTLH 400 (591)
Q Consensus 343 ~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgc----------------------CgtgP~~i~~ 400 (591)
+..++.|...|.+ +.+...+.++.+.+.|+++|=+. =|++..++..
T Consensus 17 ~~ali~yi~aGdP------------~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~ 84 (267)
T 3vnd_A 17 KGAFVPFVTIGDP------------SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFD 84 (267)
T ss_dssp CCEEEEEEETTSS------------CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCeEEEEEeCCCC------------CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 3456666666532 13567777778888899987665 4455666666
Q ss_pred HHHHhhhc-ccCccccccccccCCCCchhhhhhhCCcchhh-----cchhhhhCCCCcccccccCCCCcccccCCcchhH
Q psy17603 401 MKHRLDDW-VSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQ-----THRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVD 474 (591)
Q Consensus 401 l~~~l~~~-~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~-----~h~~~i~aG~~v~~~~~y~~~~~~l~~~~~e~~a 474 (591)
+++.+++. .. .|+ .++++-|.+.+ --.++.++|.+.... -.. .+|+..
T Consensus 85 ~v~~ir~~~~~------------~Pi----vlm~Y~npv~~~g~e~f~~~~~~aGvdgvii--~Dl--------p~ee~~ 138 (267)
T 3vnd_A 85 IITKVRAQHPD------------MPI----GLLLYANLVFANGIDEFYTKAQAAGVDSVLI--ADV--------PVEESA 138 (267)
T ss_dssp HHHHHHHHCTT------------CCE----EEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTS--------CGGGCH
T ss_pred HHHHHHhcCCC------------CCE----EEEecCcHHHHhhHHHHHHHHHHcCCCEEEe--CCC--------CHhhHH
Confidence 77777653 22 121 12223222111 113345677654221 111 123333
Q ss_pred HHHHHHHHcCCcEEEeecCCc-HHHHHHHHhccccc------C---CCCCCCCCcHHHHHHHhhhcCCCCeeEEEEcCCC
Q psy17603 475 KYVTDWLDEGVALVGGCCRTY-AEDTLHMKHRLDDW------D---DKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 544 (591)
Q Consensus 475 ~~~~~~~~~G~~~vgGCcgtt-p~~i~~l~~~~~~~------d---~~~l~dG~~l~~~~~~~~~~~~~~~~avGiNC~~ 544 (591)
+..+...+.|...|==+-++| ++.++.+.+..+++ . +........+.+.++.+++. ...+.++|+-.+.
T Consensus 139 ~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~-~~~pv~vGfGI~~ 217 (267)
T 3vnd_A 139 PFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEF-NAPPPLLGFGIAE 217 (267)
T ss_dssp HHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTT-TCCCEEECSSCCS
T ss_pred HHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh-cCCCEEEECCcCC
Confidence 344444568987766667766 46778777776655 1 11111234567777777642 3458999999999
Q ss_pred hhhHHHHHHH
Q psy17603 545 PLMVSPLIEQ 554 (591)
Q Consensus 545 p~~v~~~i~~ 554 (591)
|+++...+..
T Consensus 218 ~e~~~~~~~~ 227 (267)
T 3vnd_A 218 PEQVRAAIKA 227 (267)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999866543
No 15
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=84.54 E-value=7.1 Score=42.78 Aligned_cols=75 Identities=13% Similarity=0.060 Sum_probs=46.7
Q ss_pred cHHHHHHHHhc-cccc--CCCCCCCCCcHHHHHHHhhhcCCC-CeeEEEEcCCChhhHHHHHHHhhhcCCcEEEecCCCC
Q psy17603 495 YAEDTLHMKHR-LDDW--DDKHISNGESFTQVARTCYNMNPD-QLIAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNSGE 570 (591)
Q Consensus 495 tp~~i~~l~~~-~~~~--d~~~l~dG~~l~~~~~~~~~~~~~-~~~avGiNC~~p~~v~~~i~~l~~~~~pl~vYPNsG~ 570 (591)
.++++..+.+. .+.+ +.|.+++-+.+..+++.+.....+ =+|+||++.++.. ..+++.|-....|.++-||.+|
T Consensus 295 ~~~E~~e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r--~~~~~~Ll~~~~~~vItpN~~E 372 (540)
T 3nl6_A 295 IQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETR--LLLNNKLLTFGQFSCIKGNSSE 372 (540)
T ss_dssp CHHHHHHHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHH--HHHHHHHTTSCCCSEEEECHHH
T ss_pred CHHHHHHHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhccccc--HHHHHHHHhhCCCeEECCCHHH
Confidence 46777777765 5544 778887744454555544422222 2688999987643 3444555443478899999877
Q ss_pred c
Q psy17603 571 R 571 (591)
Q Consensus 571 ~ 571 (591)
.
T Consensus 373 ~ 373 (540)
T 3nl6_A 373 I 373 (540)
T ss_dssp H
T ss_pred H
Confidence 6
No 16
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=84.42 E-value=19 Score=36.05 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=46.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhcC--CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREWP--HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~~--~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ +.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+.. ..|+++.. .+.+..+
T Consensus 20 ~iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 86 (294)
T 3b4u_A 20 TVDIDAMI----AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIED 86 (294)
T ss_dssp SBCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHH
Confidence 45666644 45557788999987653 322 3467667777766532 35777555 2235566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 87 ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 87 AADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEc
Confidence 6665543334566666664
No 17
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=84.40 E-value=7.7 Score=39.13 Aligned_cols=28 Identities=11% Similarity=0.253 Sum_probs=24.4
Q ss_pred EecCCCCccceeecccccHHHHHHHHHH
Q psy17603 298 VYPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 298 ~l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
+|.++|+|.+++|...|.+|++...+.+
T Consensus 179 ay~~AGAD~if~~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 179 AYVEAGADMIFPEAMKTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHH
T ss_pred hhHhcCCCEEEeCCCCCHHHHHHHHHHc
Confidence 4567999999999999999999887775
No 18
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=84.36 E-value=5.4 Score=40.46 Aligned_cols=27 Identities=15% Similarity=0.330 Sum_probs=22.3
Q ss_pred ecCCCCccceeecccccHHHHHHHHHH
Q psy17603 299 YPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 299 l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
|.++|+|.+++|..++.+|++...+.+
T Consensus 184 y~eAGAD~i~~e~~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 184 YVKAGADAIFPEALQSEEEFRLFNSKV 210 (305)
T ss_dssp HHHHTCSEEEETTCCSHHHHHHHHHHS
T ss_pred HHHcCCCEEEEcCCCCHHHHHHHHHHc
Confidence 456899999999999988888776553
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=84.26 E-value=19 Score=36.67 Aligned_cols=82 Identities=15% Similarity=0.209 Sum_probs=46.2
Q ss_pred HHHHHHcCCCEEEec-ccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCC--HHHHHHHHHhhCCCCeEEEEec
Q psy17603 199 IQALVEAGADILAIE-TIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGES--FTQVARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 199 i~~l~~aGvD~i~~E-T~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~--~~~~~~~~~~~~~~~~~aiGvN 275 (591)
++.+.+.|+|+|-+. ++.++.+++.. -+..+.+.+.+.+...+..|+. +.+-++.+.+ .+-..++..
T Consensus 255 l~~~~~~g~d~i~~d~~~~~~~~~k~~-------~g~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~---~~g~I~~~G 324 (348)
T 4ay7_A 255 LSDMADCGFEGLSVEEKIGSAKKGKEV-------IGTRARLVGNVSSPFTLLPGPVDKIKAEAKEALE---GGIDVLAPG 324 (348)
T ss_dssp HHHHHTSCCSEEECCGGGCCHHHHHHH-------HTTSSEEEEEECCCCCCTTCCHHHHHHHHHHHHH---TTCSEEEES
T ss_pred HHHHHHhccccccccchhhHHHHHHHH-------hCCCEEEEcCCCChHhhcCCCHHHHHHHHHHHHh---CCCCEEeCC
Confidence 445678899999876 45556554332 1334556787877666766742 3333444433 222345556
Q ss_pred C-----CCchhhHHHHHHHH
Q psy17603 276 C-----VRPLMVSSLIEQLK 290 (591)
Q Consensus 276 C-----~~p~~i~~~l~~l~ 290 (591)
| +.|+.+..+++..+
T Consensus 325 hgi~p~tp~env~a~v~av~ 344 (348)
T 4ay7_A 325 CGIAPMTPLENVKALVAARD 344 (348)
T ss_dssp SSCCTTCCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHH
Confidence 7 34556666655544
No 20
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=83.98 E-value=1 Score=45.70 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEe
Q psy17603 194 WHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242 (591)
Q Consensus 194 ~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~ 242 (591)
.--+|+++|.++|+|+|++|..++.+|++.+.+.+. .|+++.++.
T Consensus 172 eai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~~n~~~ 216 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPILANLTE 216 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBEEECCT
T ss_pred HHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeEEEecc
Confidence 345788999999999999999999999988887763 788877643
No 21
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=83.77 E-value=11 Score=39.56 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHhcCCCceEE
Q psy17603 196 RPRIQALVEAGADILAIET-IPASKEAQMLCRLLREWPHQKAWL 238 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~~~~~pv~v 238 (591)
.++++.++++|+|+|.+.| +.........++.+++..+.|+++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~ 189 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIV 189 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEE
Confidence 3678899999999999875 444444455566666533778876
No 22
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=83.51 E-value=15 Score=37.81 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ +.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 48 ~ID~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~e 114 (343)
T 2v9d_A 48 QLDKPGTA----ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNARE 114 (343)
T ss_dssp SBCHHHHH----HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 46666644 45557788999987653 322 345666666665542 245777544 2245566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 115 ai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 6665543333456666554
No 23
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=83.50 E-value=31 Score=34.35 Aligned_cols=42 Identities=7% Similarity=-0.179 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecC---CCCHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCC---RTYAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcC---gtgP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++.+.++|++.|.+|= ...|..+.++++.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 3568888889988999999987662 24799999999988775
No 24
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=83.14 E-value=23 Score=35.71 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAI-ETIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~-ET~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++ -|-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 25 ~iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 91 (309)
T 3fkr_A 25 DLDLASQ----KRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQV 91 (309)
T ss_dssp SBCHHHH----HHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHH
Confidence 3566654 44555778899997665 3433 245666666665542 245777654 2235566
Q ss_pred HHHHHHhhCCCCeEEEEe
Q psy17603 257 VARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGv 274 (591)
+++........+++++.+
T Consensus 92 ai~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 666554333345666655
No 25
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=82.91 E-value=23 Score=35.38 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..+
T Consensus 17 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 83 (294)
T 2ehh_A 17 EVDYEAL----GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHE 83 (294)
T ss_dssp EECHHHH----HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 3566554 445567788999987653 322 345666666665532 2 35776544 2345667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 84 ai~la~~A~~~Gadavlv~ 102 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVV 102 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 7666543334566666664
No 26
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=82.84 E-value=11 Score=37.89 Aligned_cols=53 Identities=11% Similarity=-0.105 Sum_probs=31.7
Q ss_pred ccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCC
Q psy17603 314 ASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR 392 (591)
Q Consensus 314 d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCg 392 (591)
+.+.+...++.+|+.. ++||++....+ .+.+++.++++.+.+.|++.|-.-..
T Consensus 142 ~~e~~~~iv~~vr~~~-------------~~Pv~vKi~~~-------------~~~~~~~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 142 DFEATEKLLKEVFTFF-------------TKPLGVKLPPY-------------FDLVHFDIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp CHHHHHHHHHHHTTTC-------------CSCEEEEECCC-------------CSHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhc-------------CCCEEEEECCC-------------CCHHHHHHHHHHHHHcCCcEEEecCC
Confidence 4555566666666542 46877643221 12356667777777889988755443
No 27
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=82.66 E-value=1.9 Score=43.86 Aligned_cols=45 Identities=20% Similarity=0.158 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEe
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~ 242 (591)
--+|+++|.++|+|.|.+|..++.+|++.+++.+. +.|+++.+..
T Consensus 180 Ai~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~n~~~ 224 (307)
T 3lye_A 180 CIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLLNSVE 224 (307)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEEEEET
T ss_pred HHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeEEeec
Confidence 44688899999999999999999999988887764 4788877643
No 28
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.61 E-value=15 Score=37.16 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=23.9
Q ss_pred EecCCCCccceeecccccHHHHHHHHHHh
Q psy17603 298 VYPNSGEHILAIETIPASKEAQMLCRLLR 326 (591)
Q Consensus 298 ~l~~aG~D~l~iET~~d~~E~~~a~~~~~ 326 (591)
+|.++|+|.+.+|-..|.+|++...+.++
T Consensus 178 ay~eAGAD~ifi~g~~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 178 AARDAGADVGFLEGITSREMARQVIQDLA 206 (302)
T ss_dssp HHHTTTCSEEEETTCCCHHHHHHHHHHTT
T ss_pred HHHHcCCCEEeecCCCCHHHHHHHHHHhc
Confidence 35679999999999999999988776653
No 29
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=82.26 E-value=13 Score=37.20 Aligned_cols=79 Identities=10% Similarity=0.072 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..+
T Consensus 18 ~iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (292)
T 2ojp_A 18 NVCRASLK----KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAE 84 (292)
T ss_dssp CBCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHH
Confidence 46666644 45557778999988753 322 345666666665532 2 36777544 2346677
Q ss_pred HHHHHHhhCCCCeEEEEecC
Q psy17603 257 VARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC 276 (591)
+++........+++++.+-.
T Consensus 85 ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 85 AISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77776555556777777643
No 30
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=82.10 E-value=45 Score=33.84 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=35.2
Q ss_pred CCCChHHHHHHHHHHHhcCCcEEeecCCC----CHHHHHHHHHHhhhc
Q psy17603 365 DRDLCEPVDKYVTDWLDEGVALVGGCCRT----YAEDTLHMKHRLDDW 408 (591)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~Gv~~VGgcCgt----gP~~i~~l~~~l~~~ 408 (591)
...+++++.+.++++++.|..+++.-||. .|++++++++.+++.
T Consensus 299 ~~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 299 LPGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 34467889888888888889999999985 468999998877653
No 31
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=82.04 E-value=11 Score=38.08 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=24.2
Q ss_pred ecCCCCccceeecccccHHHHHHHHHHh
Q psy17603 299 YPNSGEHILAIETIPASKEAQMLCRLLR 326 (591)
Q Consensus 299 l~~aG~D~l~iET~~d~~E~~~a~~~~~ 326 (591)
|.++|+|.+++|-..|.+|++...+.+.
T Consensus 187 y~eAGAD~ifi~~~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 187 ARDEGADVGLLEGFRSKEQAAAAVAALA 214 (307)
T ss_dssp HHHTTCSEEEECCCSCHHHHHHHHHHHT
T ss_pred HHHCCCCEEEecCCCCHHHHHHHHHHcc
Confidence 4579999999999999999998877764
No 32
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=82.01 E-value=2.4 Score=42.83 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=24.0
Q ss_pred EecCCCCccceeecccccHHHHHHHHHH
Q psy17603 298 VYPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 298 ~l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
+|.++|+|.+++|..+|.++++...+.+
T Consensus 175 ay~eAGAd~i~~e~~~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 175 AYVEAGAEMLFPEAITELAMYRQFADAV 202 (295)
T ss_dssp HHHHTTCSEEEETTCCSHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeCCCCHHHHHHHHHHc
Confidence 4568999999999999989988877665
No 33
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=81.88 E-value=23 Score=35.79 Aligned_cols=78 Identities=9% Similarity=0.067 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ +.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+ +..+
T Consensus 29 ~iD~~~l~----~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~ 94 (314)
T 3d0c_A 29 EIDWKGLD----DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDT 94 (314)
T ss_dssp CBCHHHHH----HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHH
T ss_pred CCCHHHHH----HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHH
Confidence 45666644 45557788999998754 322 345666666655532 246777655 22 5566
Q ss_pred HHHHHHhhCCCCeEEEEecC
Q psy17603 257 VARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC 276 (591)
+++........+++++.+-.
T Consensus 95 ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 66655433345666666643
No 34
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=81.39 E-value=1.5 Score=44.91 Aligned_cols=45 Identities=20% Similarity=0.078 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEE
Q psy17603 193 EWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241 (591)
Q Consensus 193 ~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~ 241 (591)
+--.+|+++|.++|+|.|++|.+++.++++.+.+.+ ..|+.+.++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l----~~P~lan~~ 233 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS----CSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc----CCCEEEEec
Confidence 344568889999999999999999999988887764 368776653
No 35
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.18 E-value=18 Score=36.57 Aligned_cols=79 Identities=13% Similarity=0.043 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 41 ~iD~~~l----~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~~t~~ 107 (315)
T 3na8_A 41 GLDLPAL----GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---------SDLTTAK 107 (315)
T ss_dssp SBCHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 4666664 455567788999987643 333 246666666666542 246887654 2245667
Q ss_pred HHHHHHhhCCCCeEEEEecC
Q psy17603 257 VARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC 276 (591)
+++........+++++.+-.
T Consensus 108 ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77665443345667666643
No 36
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=81.16 E-value=7.9 Score=38.62 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=22.5
Q ss_pred ecCCCCccceeecccccHHHHHHHHHH
Q psy17603 299 YPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 299 l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
|.++|+|.+++|..++.++++...+.+
T Consensus 177 y~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 177 YADAGADGIFVPLALQSQDIRALADAL 203 (275)
T ss_dssp HHHTTCSEEECTTCCCHHHHHHHHHHC
T ss_pred HHHCCCCEEEECCCCCHHHHHHHHHhc
Confidence 456899999999999999988776653
No 37
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=81.00 E-value=20 Score=37.18 Aligned_cols=44 Identities=34% Similarity=0.453 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHH-hcCCCceEEE
Q psy17603 196 RPRIQALVEAGADILAIETIP-ASKEAQMLCRLLR-EWPHQKAWLS 239 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~-~~~Ea~aa~~a~~-~~~~~pv~vS 239 (591)
.++++.++++|+|+|.+.|.. ...+....++.++ .+++.|+++.
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G 155 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG 155 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEee
Confidence 467888999999999998754 3344545555555 4567887763
No 38
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=80.98 E-value=41 Score=32.87 Aligned_cols=156 Identities=13% Similarity=0.117 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEE-----ecccCCHHHHHHHHHHHHhcC-CCceEEEEEecC-CCcccCCCCHHHHHH
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILA-----IETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD-DKHISNGESFTQVAR 259 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~-----~ET~~~~~Ea~aa~~a~~~~~-~~pv~vSf~~~~-~g~l~~G~~~~~~~~ 259 (591)
+.+++... ++.+.+.|+|++- ++.+++..++...+..+++.. ++|+++++.... .|+..++.. ++-+
T Consensus 30 ~~~e~~~~----~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~-~~~~- 103 (257)
T 2yr1_A 30 DDRKVLRE----AEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNE-AEVR- 103 (257)
T ss_dssp SHHHHHHH----HHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCH-HHHH-
T ss_pred CHHHHHHH----HHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCH-HHHH-
Confidence 45555433 3455678999973 466666666666777777654 789998885543 344323321 1111
Q ss_pred HHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhcccccccccccc
Q psy17603 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSC 339 (591)
Q Consensus 260 ~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~ 339 (591)
.+++..... +.+|++-+|-..+. ..+..+..+++.
T Consensus 104 ------------------------~ll~~~~~~---------g~~d~iDvEl~~~~-~~~~l~~~~~~~----------- 138 (257)
T 2yr1_A 104 ------------------------RLIEAICRS---------GAIDLVDYELAYGE-RIADVRRMTEEC----------- 138 (257)
T ss_dssp ------------------------HHHHHHHHH---------TCCSEEEEEGGGTT-HHHHHHHHHHHT-----------
T ss_pred ------------------------HHHHHHHHc---------CCCCEEEEECCCCh-hHHHHHHHHHhC-----------
Confidence 122222211 12777777765544 455555544433
Q ss_pred CCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCC-CCHHHHHHHHHHhh
Q psy17603 340 KTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR-TYAEDTLHMKHRLD 406 (591)
Q Consensus 340 ~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCg-tgP~~i~~l~~~l~ 406 (591)
+..+|++... |+ + ..+.+++.+..++..++|++++=+.+- ..+++...+.+...
T Consensus 139 ---~~kvI~S~Hd---f~---~----tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~ 193 (257)
T 2yr1_A 139 ---SVWLVVSRHY---FD---G----TPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATE 193 (257)
T ss_dssp ---TCEEEEEEEE---SS---C----CCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred ---CCEEEEEecC---CC---C----CcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHH
Confidence 1234442110 10 1 011256777778888999988777653 24566666665443
No 39
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=80.97 E-value=24 Score=35.04 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=43.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..+
T Consensus 17 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 83 (289)
T 2yxg_A 17 EVDFDGL----EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEE 83 (289)
T ss_dssp EECHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 3566554 445567788999987653 322 245666666655532 2 35776544 2235566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 84 ai~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSI 102 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 6665543333456666554
No 40
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=80.33 E-value=12 Score=37.70 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..+
T Consensus 33 ~iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~ 99 (304)
T 3cpr_A 33 DIDIAAG----REVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRT 99 (304)
T ss_dssp CBCHHHH----HHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHH
Confidence 4666664 445567788999988653 322 345656666665532 2 35776544 2345667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 100 ai~la~~A~~~Gadavlv~ 118 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVV 118 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 7766543334566666653
No 41
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.11 E-value=23 Score=35.80 Aligned_cols=78 Identities=8% Similarity=-0.012 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 40 ~iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~e 106 (314)
T 3qze_A 40 RLDWDSL----AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTRE 106 (314)
T ss_dssp CBCHHHH----HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHH
Confidence 4566664 445557788999977653 433 246666666655532 235777643 2335667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 107 ai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLV 125 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7666544334566666653
No 42
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=80.00 E-value=31 Score=34.11 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=49.2
Q ss_pred HHHHHHHcCCcEEEeecCCc-HHHHHHHHhccccc---------CCCCCCCCCcHHHHHHHhhhcCCCCeeEEEEcCCCh
Q psy17603 476 YVTDWLDEGVALVGGCCRTY-AEDTLHMKHRLDDW---------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRP 545 (591)
Q Consensus 476 ~~~~~~~~G~~~vgGCcgtt-p~~i~~l~~~~~~~---------d~~~l~dG~~l~~~~~~~~~~~~~~~~avGiNC~~p 545 (591)
..+...+.|...|==+.+|| ++.++.+.+...++ .+........+.+.++.+++. ...+.++|+-.+.|
T Consensus 142 ~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~ 220 (271)
T 3nav_A 142 FVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQF-DAPPALLGFGISEP 220 (271)
T ss_dssp HHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHT-TCCCEEECSSCCSH
T ss_pred HHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHh-cCCCEEEECCCCCH
Confidence 33334458988777677766 56777777766555 111111234466777777643 24689999999999
Q ss_pred hhHHHHHHH
Q psy17603 546 LMVSPLIEQ 554 (591)
Q Consensus 546 ~~v~~~i~~ 554 (591)
+++.+.+..
T Consensus 221 e~~~~~~~~ 229 (271)
T 3nav_A 221 AQVKQAIEA 229 (271)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999866543
No 43
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=79.77 E-value=1.7 Score=43.86 Aligned_cols=45 Identities=24% Similarity=0.197 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEe
Q psy17603 194 WHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242 (591)
Q Consensus 194 ~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~ 242 (591)
--.+|+++|.++|+|.|++|.+++.++++.+.+.+. .|+++.+..
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----iP~~~N~~~ 212 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ----VPILANITE 212 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC----SCBEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC----CCEEEEecc
Confidence 345688899999999999999999999988888763 688776643
No 44
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=79.65 E-value=22 Score=38.23 Aligned_cols=44 Identities=27% Similarity=0.401 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHH-hcCCCceEEE
Q psy17603 196 RPRIQALVEAGADILAIETI-PASKEAQMLCRLLR-EWPHQKAWLS 239 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~-~~~~~pv~vS 239 (591)
.++++.++++|+|+|.+.+- +........++.++ .+++.|+++.
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g 276 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG 276 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEe
Confidence 46788899999999998753 33344445555555 4567888873
No 45
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=79.48 E-value=29 Score=34.71 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C--CCceEEEEEecCCCcccCCCCHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P--HQKAWLSFSCKDDKHISNGESFT 255 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~--~~pv~vSf~~~~~g~l~~G~~~~ 255 (591)
.++.+.++ ..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..
T Consensus 24 ~iD~~~l~----~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~ 90 (301)
T 3m5v_A 24 KVDEQSYA----RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATH 90 (301)
T ss_dssp EECHHHHH----HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHH
T ss_pred CCCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHH
Confidence 35666544 45567788999987763 333 246666666666543 3 36777644 234566
Q ss_pred HHHHHHHhhCCCCeEEEEecC
Q psy17603 256 QVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 256 ~~~~~~~~~~~~~~~aiGvNC 276 (591)
++++........+++++.+-.
T Consensus 91 ~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 777665443345666666643
No 46
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=79.20 E-value=26 Score=35.44 Aligned_cols=42 Identities=10% Similarity=-0.016 Sum_probs=31.0
Q ss_pred CChHHHHHHHHHHHhc-CC---cEEeecCC----CCHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDE-GV---ALVGGCCR----TYAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~-Gv---~~VGgcCg----tgP~~i~~l~~~l~~~ 408 (591)
.+++++.+.++++++. |. .+++.-|| +.|++++++++.+++.
T Consensus 286 gt~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 286 ASEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 3567888888887754 54 68888887 4678888888877654
No 47
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=78.98 E-value=7.2 Score=39.18 Aligned_cols=25 Identities=12% Similarity=-0.062 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHHhcC-CcEEeecCCC
Q psy17603 369 CEPVDKYVTDWLDEG-VALVGGCCRT 393 (591)
Q Consensus 369 ~~~~~~~~~~~~~~G-v~~VGgcCgt 393 (591)
.+++.++++.+.+.| ++.|=.-..+
T Consensus 173 ~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 173 IAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred HHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 356777777778889 8887654443
No 48
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=78.59 E-value=22 Score=35.58 Aligned_cols=77 Identities=12% Similarity=0.025 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.... .+..+
T Consensus 21 ~iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~ 87 (300)
T 3eb2_A 21 RVRADVM----GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVAD 87 (300)
T ss_dssp CBCHHHH----HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHH
Confidence 3566654 455567788999987643 322 346666666665542 2 4588775522 34556
Q ss_pred HHHHHHhhCCCCeEEEEe
Q psy17603 257 VARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGv 274 (591)
+++........+++++.+
T Consensus 88 ai~la~~a~~~Gadavlv 105 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILA 105 (300)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 666543322345555555
No 49
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=78.36 E-value=11 Score=37.68 Aligned_cols=78 Identities=10% Similarity=0.008 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQV 257 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~~ 257 (591)
++.+.+ +..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (292)
T 2vc6_A 18 IDEVAL----HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAEA 84 (292)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 566554 445557788999998753 322 345666666666542 246777554 23355677
Q ss_pred HHHHHhhCCCCeEEEEecC
Q psy17603 258 ARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 258 ~~~~~~~~~~~~~aiGvNC 276 (591)
++........+++++.+..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 6665443345677777654
No 50
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=78.32 E-value=43 Score=37.88 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
+++.+.+.++.+.++|++.|.+|=.. .|..+.++++.++...
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhC
Confidence 56888899999999999999988544 5999999999987753
No 51
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=78.12 E-value=2.5 Score=42.71 Aligned_cols=43 Identities=14% Similarity=0.218 Sum_probs=35.3
Q ss_pred HHHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHhcCCCceEEE
Q psy17603 195 HRPRIQALVEAGADILAIET-IPASKEAQMLCRLLREWPHQKAWLS 239 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~~~~~pv~vS 239 (591)
-.+|+++|.++|+|.|++|+ +++..+++.+.+.++. ..|+++.
T Consensus 172 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~ 215 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEe
Confidence 44678899999999999998 8999999998888752 3687655
No 52
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.86 E-value=11 Score=37.70 Aligned_cols=78 Identities=9% Similarity=-0.025 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAI-ETIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~-ET~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.++++|+|.|++ -|-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 18 ~iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (291)
T 3tak_A 18 GVDWKSLE----KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTRE 84 (291)
T ss_dssp CBCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHH
Confidence 46666644 4555778899997654 3444 356766666666542 235777643 2245666
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 85 ai~la~~a~~~Gadavlv~ 103 (291)
T 3tak_A 85 AIELTKAAKDLGADAALLV 103 (291)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEc
Confidence 6665543333455665553
No 53
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=77.83 E-value=16 Score=36.57 Aligned_cols=78 Identities=8% Similarity=-0.031 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAI-ETIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~-ET~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.+++.|+|.|++ -|-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 24 ~iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 90 (297)
T 3flu_A 24 SIHYEQLR----DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVE 90 (297)
T ss_dssp CBCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHH
Confidence 45666644 4556778999997765 3433 246666666665532 245777644 2345667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 91 ai~la~~a~~~Gadavlv~ 109 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSV 109 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 7666543334556666553
No 54
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=77.73 E-value=7.7 Score=38.74 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHH-----------------HHHHHcCCCEEEeccc-----------------CCHHHHHHHHHHHH--
Q psy17603 186 VSEATMAEWHRPRI-----------------QALVEAGADILAIETI-----------------PASKEAQMLCRLLR-- 229 (591)
Q Consensus 186 ~~~e~l~~~h~~~i-----------------~~l~~aGvD~i~~ET~-----------------~~~~Ea~aa~~a~~-- 229 (591)
.+.+++.+-.+.|+ +....+|+|+|++=.= .+-.| ..++..+
T Consensus 11 ~~r~~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~--iv~e~~~ev 88 (286)
T 2p10_A 11 PTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQ--IVVDMAREV 88 (286)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHH--HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHH--HHHHHHHhh
Confidence 46788887777763 3445679999986321 11122 2233333
Q ss_pred --hcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC
Q psy17603 230 --EWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277 (591)
Q Consensus 230 --~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~ 277 (591)
...+.|||..+ +..+ -|-.....++.+.+ .++.++ +|-.
T Consensus 89 lp~v~~iPV~Agv-~~~D----P~~~~g~~Le~lk~---~Gf~Gv-~N~p 129 (286)
T 2p10_A 89 LPVVRHTPVLAGV-NGTD----PFMVMSTFLRELKE---IGFAGV-QNFP 129 (286)
T ss_dssp GGGCSSSCEEEEE-CTTC----TTCCHHHHHHHHHH---HTCCEE-EECS
T ss_pred hccCCCCCEEEEE-CCcC----CCcCHHHHHHHHHH---hCCceE-EECC
Confidence 33578999883 3221 12334455555543 467788 8864
No 55
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=77.45 E-value=14 Score=37.15 Aligned_cols=79 Identities=18% Similarity=0.093 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ ++.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 32 ~iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 98 (304)
T 3l21_A 32 SLDTATA----ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---------GTYDTAH 98 (304)
T ss_dssp CBCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHH
Confidence 4566664 455567788999976653 433 246666666666542 245877654 2235566
Q ss_pred HHHHHHhhCCCCeEEEEecC
Q psy17603 257 VARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvNC 276 (591)
+++........+++++.+-.
T Consensus 99 ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 66655433334566666643
No 56
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=77.19 E-value=2.4 Score=42.98 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
-.+|+++|.++|+|.|++|.+++.+|++.+.+.+ ..|+++.+
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~----~~P~~~n~ 218 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEALQSEEEFRLFNSKV----NAPLLANM 218 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS----CSCBEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc----CCCEEEee
Confidence 4568889999999999999999999988877664 36887665
No 57
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=77.14 E-value=33 Score=33.98 Aligned_cols=155 Identities=13% Similarity=0.143 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEE-----ecccCCHHHHHHHHHHHHhc-CCCceEEEEEecC-CCcccCCCCHHHHHH
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILA-----IETIPASKEAQMLCRLLREW-PHQKAWLSFSCKD-DKHISNGESFTQVAR 259 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~-----~ET~~~~~Ea~aa~~a~~~~-~~~pv~vSf~~~~-~g~l~~G~~~~~~~~ 259 (591)
+.+++... ++.+.+.|+|++- ++......++...+..+|+. .++|+++++.... .|... +. -++-
T Consensus 50 ~~~e~~~~----~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~-~~-~~~~-- 121 (276)
T 3o1n_A 50 TITDVKSE----ALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQA-LT-TGQY-- 121 (276)
T ss_dssp SHHHHHHH----HHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBC-CC-HHHH--
T ss_pred CHHHHHHH----HHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCC-CC-HHHH--
Confidence 45554433 3345568999984 35555556677777777765 4789998885533 33332 21 1111
Q ss_pred HHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCC-CccceeecccccHHHHHHHHHHhhccccccccccc
Q psy17603 260 TCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG-EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFS 338 (591)
Q Consensus 260 ~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG-~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~ 338 (591)
..+++...+ .| +|++-+|-..+.+..+..+..+++.
T Consensus 122 -----------------------~~ll~~~l~----------~g~~dyIDvEl~~~~~~~~~l~~~a~~~---------- 158 (276)
T 3o1n_A 122 -----------------------IDLNRAAVD----------SGLVDMIDLELFTGDDEVKATVGYAHQH---------- 158 (276)
T ss_dssp -----------------------HHHHHHHHH----------HTCCSEEEEEGGGCHHHHHHHHHHHHHT----------
T ss_pred -----------------------HHHHHHHHh----------cCCCCEEEEECcCCHHHHHHHHHHHHhC----------
Confidence 112222221 24 7788888766555455555555443
Q ss_pred cCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCC-CCHHHHHHHHHHhh
Q psy17603 339 CKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR-TYAEDTLHMKHRLD 406 (591)
Q Consensus 339 ~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCg-tgP~~i~~l~~~l~ 406 (591)
+..||++.-. | .++ .+.+++.+..++...+|++++=+-+- ..+++...+.+...
T Consensus 159 ----~~kvI~S~Hd---f---~~t----P~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~ 213 (276)
T 3o1n_A 159 ----NVAVIMSNHD---F---HKT----PAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATV 213 (276)
T ss_dssp ----TCEEEEEEEE---S---SCC----CCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred ----CCEEEEEeec---C---CCC----cCHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHH
Confidence 2345542110 1 111 12356777778888899888776543 34666666666443
No 58
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=76.90 E-value=20 Score=35.92 Aligned_cols=27 Identities=15% Similarity=0.303 Sum_probs=22.6
Q ss_pred ecCCCCccceeec-ccccHHHHHHHHHH
Q psy17603 299 YPNSGEHILAIET-IPASKEAQMLCRLL 325 (591)
Q Consensus 299 l~~aG~D~l~iET-~~d~~E~~~a~~~~ 325 (591)
|.++|+|.+++|. .++.+|++...+.+
T Consensus 175 y~eAGAd~i~~e~~~~~~~~~~~i~~~~ 202 (290)
T 2hjp_A 175 YEEAGADAILIHSRQKTPDEILAFVKSW 202 (290)
T ss_dssp HHHTTCSEEEECCCCSSSHHHHHHHHHC
T ss_pred HHHcCCcEEEeCCCCCCHHHHHHHHHHc
Confidence 4568999999999 99999998776654
No 59
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=76.57 E-value=47 Score=32.58 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCEEEecccC-----------CHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIP-----------ASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~-----------~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
-.+.++.+.++|+|++-+-||- ..+..+.+.++.++ .++|++.++
T Consensus 39 a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~-~Gl~~~te~ 94 (262)
T 1zco_A 39 IMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE-YGLVTVTEV 94 (262)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH-cCCcEEEee
Confidence 3455667888999999998873 04445666666666 478888666
No 60
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=76.36 E-value=32 Score=33.50 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCEE---EecccCCHH----HHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCH---HHHHHHHHhhCCC
Q psy17603 198 RIQALVEAGADIL---AIETIPASK----EAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESF---TQVARTCYNMNPD 267 (591)
Q Consensus 198 ~i~~l~~aGvD~i---~~ET~~~~~----Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~---~~~~~~~~~~~~~ 267 (591)
+++..+++|+|.+ +..-..+.. +++.++++++++ +.|+++-.. ....++.+|.+. .++++.+. ..
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~-g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~---~~ 178 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYW-GMPLIAMMY-PRGKHIQNERDPELVAHAARLGA---EL 178 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHH-TCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHH---HT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHc-CCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHH---Hc
Confidence 4455678999998 444444433 456666666664 678877432 222234344443 23323332 24
Q ss_pred CeEEEEec
Q psy17603 268 QLIAVGVN 275 (591)
Q Consensus 268 ~~~aiGvN 275 (591)
+++.|+++
T Consensus 179 Gad~i~~~ 186 (273)
T 2qjg_A 179 GADIVKTS 186 (273)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 55566665
No 61
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=76.28 E-value=16 Score=37.00 Aligned_cols=78 Identities=13% Similarity=0.040 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 39 ~iD~~~l~----~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~ 105 (315)
T 3si9_A 39 AIDEKAFC----NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSE 105 (315)
T ss_dssp CBCHHHHH----HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 46666644 45557788999987743 322 245666666665542 246877644 2345667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 106 ai~la~~A~~~Gadavlv~ 124 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVV 124 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 7666543334566666653
No 62
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=76.26 E-value=56 Score=32.31 Aligned_cols=42 Identities=12% Similarity=-0.043 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecC---CCCHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCC---RTYAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcC---gtgP~~i~~l~~~l~~~ 408 (591)
.+++.+.++++.+.+.|++.|.++= ...|..+.++++.+++.
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 4578899999988899999987761 13699999999988765
No 63
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=76.04 E-value=31 Score=34.76 Aligned_cols=72 Identities=10% Similarity=-0.068 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCEEEe-cccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHHHHHHHHhhCC
Q psy17603 195 HRPRIQALVEAGADILAI-ETIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP 266 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~-ET~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~ 266 (591)
.+..++.++++|+|.|++ -|-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..++++.......
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---------g~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---------GTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---------CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHHHHHHHHHHh
Confidence 445566778999996654 4544 246766777766643 2 35777654 22356666665543323
Q ss_pred CCe-EEEEec
Q psy17603 267 DQL-IAVGVN 275 (591)
Q Consensus 267 ~~~-~aiGvN 275 (591)
.+. +++.+-
T Consensus 101 ~Ga~davlv~ 110 (311)
T 3h5d_A 101 FGGFAAGLAI 110 (311)
T ss_dssp SCCCSEEEEE
T ss_pred cCCCcEEEEc
Confidence 343 666553
No 64
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=75.78 E-value=17 Score=37.18 Aligned_cols=78 Identities=10% Similarity=0.018 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..+
T Consensus 51 ~iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~e 117 (332)
T 2r8w_A 51 RVDIEAFS----ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---------GALRTDE 117 (332)
T ss_dssp CBCHHHHH----HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 46666644 45557778999988653 322 345666666665542 2 36877655 1235566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 118 ai~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 118 AVALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 6665543333456666654
No 65
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=75.27 E-value=45 Score=33.14 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=40.3
Q ss_pred ceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEeccc---CC------HHHHHHHHHHH
Q psy17603 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETI---PA------SKEAQMLCRLL 228 (591)
Q Consensus 158 ~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~---~~------~~Ea~aa~~a~ 228 (591)
+++|.|-+=+++.++.||..| .+.+.+.+ +++.++++|+|+|=+..- |. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 467889898888888886443 23444443 455678899999866643 33 56765555555
Q ss_pred H
Q psy17603 229 R 229 (591)
Q Consensus 229 ~ 229 (591)
+
T Consensus 83 ~ 83 (282)
T 1aj0_A 83 E 83 (282)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=75.24 E-value=51 Score=33.70 Aligned_cols=77 Identities=4% Similarity=-0.080 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVA 258 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~ 258 (591)
.++.+.++ ..++.++++|+|.|++- |-+ +.+|-+.+++. ......|+++.. .+.+..+++
T Consensus 43 ~ID~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 43 TPDFDALV----RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp SBCHHHHH----HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEEC---------CCSSHHHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEec---------CCCCHHHHH
Confidence 46666644 45557788999987653 322 24565666665 211346777544 234556666
Q ss_pred HHHHhhCCCCeEEEEec
Q psy17603 259 RTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 259 ~~~~~~~~~~~~aiGvN 275 (591)
+........+++++.+-
T Consensus 109 ~la~~A~~~Gadavlv~ 125 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVI 125 (344)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEC
Confidence 65543333456666654
No 67
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=75.15 E-value=54 Score=33.10 Aligned_cols=78 Identities=8% Similarity=0.047 Sum_probs=48.9
Q ss_pred HHHHHHcCC-CEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC
Q psy17603 199 IQALVEAGA-DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277 (591)
Q Consensus 199 i~~l~~aGv-D~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~ 277 (591)
+.+..++|. ++|.... -+.++++..++.+++..+.|+.|.+.+.+ ..+.+.++.+.+ .++++|-+++.
T Consensus 29 a~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-------~~~~~~~~~a~~---~g~d~V~~~~g 97 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLTDKPFGVNIMLLS-------PFVEDIVDLVIE---EGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHCCSCEEEEECTTS-------TTHHHHHHHHHH---TTCSEEEECSS
T ss_pred HHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEecCCC-------CCHHHHHHHHHH---CCCCEEEECCC
Confidence 334556675 6665554 45677777777777666788888875521 135677766643 46777888887
Q ss_pred CchhhHHHHH
Q psy17603 278 RPLMVSSLIE 287 (591)
Q Consensus 278 ~p~~i~~~l~ 287 (591)
.|..+...++
T Consensus 98 ~p~~~i~~l~ 107 (332)
T 2z6i_A 98 NPSKYMERFH 107 (332)
T ss_dssp CGGGTHHHHH
T ss_pred ChHHHHHHHH
Confidence 7755444433
No 68
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=74.73 E-value=29 Score=34.53 Aligned_cols=78 Identities=8% Similarity=0.061 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHHH-cCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHH
Q psy17603 185 HVSEATMAEWHRPRIQALVE-AGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFT 255 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~-aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~ 255 (591)
.++.+.++ ..++.+++ +|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..
T Consensus 20 ~iD~~~l~----~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~ 86 (293)
T 1f6k_A 20 TINEKGLR----QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLK 86 (293)
T ss_dssp CBCHHHHH----HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHH
T ss_pred CcCHHHHH----HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHH
Confidence 46666644 45557788 999987653 322 345656666655532 2 35777544 233556
Q ss_pred HHHHHHHhhCCCCeEEEEec
Q psy17603 256 QVARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 256 ~~~~~~~~~~~~~~~aiGvN 275 (591)
++++........+++++.+-
T Consensus 87 ~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEC
Confidence 67665543333456666654
No 69
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=74.69 E-value=94 Score=33.15 Aligned_cols=41 Identities=7% Similarity=-0.122 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCC---CCHHHHHHHHHHhhhc
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCR---TYAEDTLHMKHRLDDW 408 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCg---tgP~~i~~l~~~l~~~ 408 (591)
+++.+.+.++++.++|++.|.+|=. ..|..+.++++.+++.
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~ 199 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQ 199 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 5678889999999999999998733 3599999999998775
No 70
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=74.54 E-value=43 Score=32.15 Aligned_cols=85 Identities=19% Similarity=0.219 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecC-CCc-ccCCCCHHHHHHHHHhhCCCCeEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD-DKH-ISNGESFTQVARTCYNMNPDQLIAV 272 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~-~g~-l~~G~~~~~~~~~~~~~~~~~~~ai 272 (591)
..+.++++.++|+..|..++ ... ++.+|+..++|++ ...-.+ .+. ..-+.+++++-+.+ + .+++.|
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~~---~~~----i~~ir~~v~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~~~-~---~Gad~V 105 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRIEG---IDN----LRMTRSLVSVPII-GIIKRDLDESPVRITPFLDDVDALA-Q---AGAAII 105 (232)
T ss_dssp HHHHHHHHHHTTCSEEEEES---HHH----HHHHHTTCCSCEE-EECBCCCSSCCCCBSCSHHHHHHHH-H---HTCSEE
T ss_pred HHHHHHHHHHCCCeEEEECC---HHH----HHHHHHhcCCCEE-EEEeecCCCcceEeCccHHHHHHHH-H---cCCCEE
Confidence 44566688899999998754 333 3445555688984 221121 111 11123444543332 2 355566
Q ss_pred EecCC---CchhhHHHHHHHHh
Q psy17603 273 GVNCV---RPLMVSSLIEQLKT 291 (591)
Q Consensus 273 GvNC~---~p~~i~~~l~~l~~ 291 (591)
-++++ .|+.+..+++.+++
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 106 AVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp EEECCSSCCSSCHHHHHHHHHH
T ss_pred EECccccCCHHHHHHHHHHHHH
Confidence 66664 47777777776654
No 71
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=74.54 E-value=32 Score=34.99 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHHHhc-CC---cEEeecCCC----CHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDE-GV---ALVGGCCRT----YAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~-Gv---~~VGgcCgt----gP~~i~~l~~~l~~~ 408 (591)
.+++++.+.++++++. |. .+++.-||. .|++++++++.+++.
T Consensus 299 ~t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~~ 348 (354)
T 3cyv_A 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRL 348 (354)
T ss_dssp SCHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4578888888887754 54 688888985 578889888877664
No 72
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=74.50 E-value=14 Score=36.97 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQV 257 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~~ 257 (591)
++.+.+ +..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (297)
T 2rfg_A 18 VDEKAL----AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVEA 84 (297)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHHH
Confidence 566554 445567788999988653 322 345666666665532 2 36777554 23455667
Q ss_pred HHHHHhhCCCCeEEEEec
Q psy17603 258 ARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 258 ~~~~~~~~~~~~~aiGvN 275 (591)
++........+++++.+-
T Consensus 85 i~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 665543333466666664
No 73
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=74.37 E-value=11 Score=38.87 Aligned_cols=49 Identities=8% Similarity=-0.191 Sum_probs=29.7
Q ss_pred ccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcC-CcEEe
Q psy17603 314 ASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEG-VALVG 388 (591)
Q Consensus 314 d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~G-v~~VG 388 (591)
+.+.+...++++++.. ++||++....+ .+.+++.+.++.+.+.| ++.|=
T Consensus 177 ~~e~~~~il~av~~~~-------------~~PV~vKi~p~-------------~d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVY-------------PHSFGVKMPPY-------------FDFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp SHHHHHHHHHHHHHHC-------------CSCEEEEECCC-------------CSHHHHHHHHHHHHTCTTEEEEE
T ss_pred CHHHHHHHHHHHHHhh-------------CCCeEEEecCC-------------CCHHHHHHHHHHHHhCCCccEEE
Confidence 4555666677777642 47887753322 12356777776666777 77653
No 74
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=74.15 E-value=14 Score=37.21 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.++ ..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 28 ~iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~ 94 (303)
T 2wkj_A 28 ALDKASLR----RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAE 94 (303)
T ss_dssp SBCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHH
Confidence 35666544 45557788999988753 322 345666666665542 245777644 2235566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 95 ai~la~~A~~~Gadavlv~ 113 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAV 113 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEec
Confidence 6665543333456666654
No 75
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=73.88 E-value=73 Score=32.54 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=31.2
Q ss_pred CChHHHHHHHHHHHhc-C--CcEEeecCCC----CHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDE-G--VALVGGCCRT----YAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~-G--v~~VGgcCgt----gP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++++++. | -.|++.-||. .|++++++++.+++.
T Consensus 312 gt~e~i~~~v~~~l~~~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 312 ASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3567888777777653 4 7889999975 558899888877654
No 76
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=73.87 E-value=13 Score=37.23 Aligned_cols=78 Identities=8% Similarity=-0.032 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQV 257 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~~ 257 (591)
++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. .+.+..++
T Consensus 19 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDKL----SELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 455554 455567788999987653 322 345666666665532 2 36777544 23456677
Q ss_pred HHHHHhhCCCCeEEEEecC
Q psy17603 258 ARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 258 ~~~~~~~~~~~~~aiGvNC 276 (591)
++........+++++.+-.
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 6665443345667766643
No 77
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=73.84 E-value=75 Score=32.64 Aligned_cols=74 Identities=7% Similarity=0.062 Sum_probs=45.9
Q ss_pred HcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCC--chh
Q psy17603 204 EAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR--PLM 281 (591)
Q Consensus 204 ~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~--p~~ 281 (591)
+.|+.+|- ...+.++....++.+++.+..|+.+.+-+.+ .+.++.+.+ .+++.|=+|+.+ |..
T Consensus 68 ~GGlgii~--~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~----------~e~a~~l~e---aGad~I~ld~a~G~~~~ 132 (361)
T 3khj_A 68 LGGIGIIH--KNMDMESQVNEVLKVKNSGGLRVGAAIGVNE----------IERAKLLVE---AGVDVIVLDSAHGHSLN 132 (361)
T ss_dssp TTCEEEEC--SSSCHHHHHHHHHHHHHTTCCCCEEEECTTC----------HHHHHHHHH---TTCSEEEECCSCCSBHH
T ss_pred cCCCeEEe--cCCCHHHHHHHHHHHHhccCceEEEEeCCCH----------HHHHHHHHH---cCcCeEEEeCCCCCcHH
Confidence 45666664 3446777776777777666788888774321 344555533 456777788754 555
Q ss_pred hHHHHHHHHhc
Q psy17603 282 VSSLIEQLKTE 292 (591)
Q Consensus 282 i~~~l~~l~~~ 292 (591)
+...++.+++.
T Consensus 133 ~~~~i~~i~~~ 143 (361)
T 3khj_A 133 IIRTLKEIKSK 143 (361)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66667766653
No 78
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=73.68 E-value=41 Score=32.45 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=76.5
Q ss_pred HHHHHHcCCCEEE-----ecccCCHHHHHHHHHHHHhcC-CCceEEEEEecC-CCcccCCCCHHHHHHHHHhhCCCCeEE
Q psy17603 199 IQALVEAGADILA-----IETIPASKEAQMLCRLLREWP-HQKAWLSFSCKD-DKHISNGESFTQVARTCYNMNPDQLIA 271 (591)
Q Consensus 199 i~~l~~aGvD~i~-----~ET~~~~~Ea~aa~~a~~~~~-~~pv~vSf~~~~-~g~l~~G~~~~~~~~~~~~~~~~~~~a 271 (591)
++.+.+.|+|++- ++.+ +..++...+..+|+.. ++|+++++.... +|+. ++. -++-
T Consensus 23 ~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~-~~~-~~~~-------------- 85 (238)
T 1sfl_A 23 KINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYG-QFT-NDSY-------------- 85 (238)
T ss_dssp HHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCB-CCC-HHHH--------------
T ss_pred HHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCC-CCC-HHHH--------------
Confidence 3345567889873 2433 4566666667777654 689988875433 3332 221 1111
Q ss_pred EEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeeccc--ccHHHHHHHHHHhhccccccccccccCCCCcceEEe
Q psy17603 272 VGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIP--ASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVY 349 (591)
Q Consensus 272 iGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~--d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~ 349 (591)
..+++.+.+. +++|++-+|-.. +....+..+..+++.. ..+|++
T Consensus 86 -----------~~ll~~~~~~---------~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~--------------~kvI~S 131 (238)
T 1sfl_A 86 -----------LNLISDLANI---------NGIDMIDIEWQADIDIEKHQRIITHLQQYN--------------KEVIIS 131 (238)
T ss_dssp -----------HHHHHHGGGC---------TTCCEEEEECCTTSCHHHHHHHHHHHHHTT--------------CEEEEE
T ss_pred -----------HHHHHHHHHh---------CCCCEEEEEccCCCChHHHHHHHHHHHhcC--------------CEEEEE
Confidence 1223322111 357778788665 4444555555555431 234442
Q ss_pred cCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCC-CCHHHHHHHHHHh
Q psy17603 350 PNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCR-TYAEDTLHMKHRL 405 (591)
Q Consensus 350 pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCg-tgP~~i~~l~~~l 405 (591)
... | .+ ..+.+++.+.+++...+|++++=+.+- ..+++...+.+..
T Consensus 132 ~Hd---f---~~----tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~ 178 (238)
T 1sfl_A 132 HHN---F---ES----TPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAM 178 (238)
T ss_dssp EEE---S---SC----CCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHH
T ss_pred ecC---C---CC----CcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHH
Confidence 110 1 01 011257777778888999988777653 2456666665544
No 79
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=73.67 E-value=72 Score=32.29 Aligned_cols=75 Identities=13% Similarity=0.165 Sum_probs=45.0
Q ss_pred CCCHHHHH---HHHHHHHHHHHHcCCCEEEeccc----------CC-----------H----HHHHHHHHHHHhcCCCce
Q psy17603 185 HVSEATMA---EWHRPRIQALVEAGADILAIETI----------PA-----------S----KEAQMLCRLLREWPHQKA 236 (591)
Q Consensus 185 ~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET~----------~~-----------~----~Ea~aa~~a~~~~~~~pv 236 (591)
.++.+++. +.|.+-++.+.++|.|.|-+.-- |. + +-+..+++++++.-+.|+
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcE
Confidence 46777765 55666677778899999976642 11 1 123455666664336787
Q ss_pred EEEEEecCCCcccCCCCHHHHHHHH
Q psy17603 237 WLSFSCKDDKHISNGESFTQVARTC 261 (591)
Q Consensus 237 ~vSf~~~~~g~l~~G~~~~~~~~~~ 261 (591)
.|-++..+ ...+|.+.+++++.+
T Consensus 213 ~vris~~~--~~~~g~~~~~~~~~a 235 (338)
T 1z41_A 213 FVRVSASD--YTDKGLDIADHIGFA 235 (338)
T ss_dssp EEEEECCC--CSTTSCCHHHHHHHH
T ss_pred EEEecCcc--cCCCCCCHHHHHHHH
Confidence 77665532 233566666655443
No 80
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=73.53 E-value=71 Score=32.14 Aligned_cols=77 Identities=19% Similarity=0.069 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ ++.++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 28 ~iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 94 (318)
T 3qfe_A 28 TLDLASQ----ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQ 94 (318)
T ss_dssp EECHHHH----HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHH
T ss_pred CCCHHHH----HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 3566654 455567888999976653 433 246666666665542 245777643 2345666
Q ss_pred HHHHHHhhCCCCeEEEEe
Q psy17603 257 VARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGv 274 (591)
+++........+++++.+
T Consensus 95 ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLV 112 (318)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 666554333345555555
No 81
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=73.52 E-value=33 Score=32.96 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCC--Cc-ccCCCCHHHHHHHHHhhCCCCeEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDD--KH-ISNGESFTQVARTCYNMNPDQLIA 271 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~--g~-l~~G~~~~~~~~~~~~~~~~~~~a 271 (591)
..+.++++.++|+..|..++ ... ++.+|+..++|++-- ++.+ +. ..-+.+++++-+.+ . .+++.
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~~---~~~----i~~ir~~v~~Pvig~--~k~~~~~~~~~I~~~~~~i~~~~-~---aGad~ 104 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRIEG---IEN----LRTVRPHLSVPIIGI--IKRDLTGSPVRITPYLQDVDALA-Q---AGADI 104 (229)
T ss_dssp HHHHHHHHHHTTCSEEEEES---HHH----HHHHGGGCCSCEEEE--CBCCCSSCCCCBSCSHHHHHHHH-H---HTCSE
T ss_pred HHHHHHHHHHCCCcEEEECC---HHH----HHHHHHhcCCCEEEE--EeecCCCCceEeCccHHHHHHHH-H---cCCCE
Confidence 34566688899999998865 333 345555568897632 2211 10 11122444543332 2 35566
Q ss_pred EEecCC---CchhhHHHHHHHHh
Q psy17603 272 VGVNCV---RPLMVSSLIEQLKT 291 (591)
Q Consensus 272 iGvNC~---~p~~i~~~l~~l~~ 291 (591)
|-++|+ .|+.+..+++.+++
T Consensus 105 I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 105 IAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHH
T ss_pred EEECccccCChHHHHHHHHHHHH
Confidence 666664 47777777776654
No 82
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=73.50 E-value=2.7 Score=42.36 Aligned_cols=44 Identities=25% Similarity=0.151 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 195 HRPRIQALVEAGADILAIET-IPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
-.+|+++|.++|+|.|++|. +++..|++.+.+.+.. ..|+++.+
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~vP~i~n~ 212 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG--KVPLVLVP 212 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC--SSCEEECG
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC--CCCEEEec
Confidence 34678899999999999999 9999999888776531 26776543
No 83
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=73.23 E-value=76 Score=31.44 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=48.4
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCch
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~ 280 (591)
.|+++|++.+-+|--....| .++.+.+ .+.|+.--+-+.|. .+..+ .+....| -...
T Consensus 114 rl~kaGa~aVklEdg~~~~~---~i~~l~~-~GIpv~gHlgltPq-----------~~~~~-----gg~~vqg---rt~~ 170 (275)
T 3vav_A 114 KLMRAGAQMVKFEGGEWLAE---TVRFLVE-RAVPVCAHVGLTPQ-----------SVHAF-----GGFKVQG---KTEA 170 (275)
T ss_dssp HHHHTTCSEEEEECCGGGHH---HHHHHHH-TTCCEEEEEESCGG-----------GHHHH-----C---CCC---CSHH
T ss_pred HHHHcCCCEEEECCchhHHH---HHHHHHH-CCCCEEEecCCCce-----------EEecc-----CCeEEEc---CCHH
Confidence 35678999999997543322 3334444 47888855433221 01111 0111111 1122
Q ss_pred hhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHH
Q psy17603 281 MVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLC 322 (591)
Q Consensus 281 ~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~ 322 (591)
....+++..+ +|.++|+|.+++|-+++. +++...
T Consensus 171 ~a~~~i~rA~-------a~~eAGA~~ivlE~vp~~-~a~~It 204 (275)
T 3vav_A 171 GAAQLLRDAR-------AVEEAGAQLIVLEAVPTL-VAAEVT 204 (275)
T ss_dssp HHHHHHHHHH-------HHHHHTCSEEEEESCCHH-HHHHHH
T ss_pred HHHHHHHHHH-------HHHHcCCCEEEecCCCHH-HHHHHH
Confidence 3344555443 356789999999999985 555443
No 84
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=73.07 E-value=30 Score=34.42 Aligned_cols=77 Identities=16% Similarity=0.187 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVA 258 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~ 258 (591)
.++.+.+ +..++.+++.|+|.|+.- |-+ +.+|-+.+++.+.+..+- ++ ..+ .+.+..+++
T Consensus 16 ~iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-Vi-aGv--------g~~~t~~ai 81 (288)
T 2nuw_A 16 KVNVDAL----KTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LI-FQV--------GSLNLNDVM 81 (288)
T ss_dssp CBCHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EE-EEC--------CCSCHHHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eE-Eee--------CCCCHHHHH
Confidence 4566654 445557788999988653 322 346767777777654322 33 331 234566777
Q ss_pred HHHHhhCCCCeEEEEec
Q psy17603 259 RTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 259 ~~~~~~~~~~~~aiGvN 275 (591)
+........+++++.+-
T Consensus 82 ~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEc
Confidence 66554445667776664
No 85
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=72.57 E-value=41 Score=34.28 Aligned_cols=59 Identities=17% Similarity=0.239 Sum_probs=37.0
Q ss_pred CCCHHHHH---HHHHHHHHHHHHcCCCEEEeccc----------CC-----------HH-H---HHHHHHHHHhcCCCce
Q psy17603 185 HVSEATMA---EWHRPRIQALVEAGADILAIETI----------PA-----------SK-E---AQMLCRLLREWPHQKA 236 (591)
Q Consensus 185 ~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET~----------~~-----------~~-E---a~aa~~a~~~~~~~pv 236 (591)
.++.+|+. +.|.+-++...++|.|.|-+.-- |. +. . +..+++++|+..+.|+
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 46776665 55666677778899999987743 11 11 1 3455666664347788
Q ss_pred EEEEEec
Q psy17603 237 WLSFSCK 243 (591)
Q Consensus 237 ~vSf~~~ 243 (591)
.|-++..
T Consensus 213 ~vRls~~ 219 (340)
T 3gr7_A 213 FVRISAS 219 (340)
T ss_dssp EEEEESC
T ss_pred EEEeccc
Confidence 8776653
No 86
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=72.55 E-value=2.5 Score=42.29 Aligned_cols=39 Identities=28% Similarity=0.220 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCce
Q psy17603 194 WHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKA 236 (591)
Q Consensus 194 ~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv 236 (591)
--.+|+++|.++|+|.|++|.+++.++++.+.+.+. .|+
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----~P~ 207 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLALQSQDIRALADALR----VPL 207 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS----SCE
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC----CCE
Confidence 344688899999999999999999999988877643 565
No 87
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=72.16 E-value=1.1e+02 Score=32.63 Aligned_cols=63 Identities=13% Similarity=0.047 Sum_probs=42.0
Q ss_pred HHHHHHHcCCCEEEec-ccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 198 RIQALVEAGADILAIE-TIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~E-T~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
|+.....+|+|.+++- |+-...+.+..++.++++ ++.+++-. .+.+|+-+.+. .++..||+|=
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~l-gm~~LvEv-----------h~~eE~~~A~~----lga~iIGinn 185 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSL-EMGVLTEV-----------SNEEEQERAIA----LGAKVVGINN 185 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHT-TCEEEEEE-----------CSHHHHHHHHH----TTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHHH----CCCCEEEEeC
Confidence 4444667899987665 555556778888888875 67666554 24456555442 4678899985
No 88
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=72.05 E-value=13 Score=37.57 Aligned_cols=77 Identities=13% Similarity=0.121 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-C-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-P-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ ++.++.++++|+|.|++- |-+ +.+|-+.+++.+.+. . ..|+++.. |.+..+
T Consensus 29 ~iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------g~~t~~ 94 (316)
T 3e96_A 29 SIDWHHY----KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------GYATST 94 (316)
T ss_dssp CBCHHHH----HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----------CSSHHH
T ss_pred CCCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----------CcCHHH
Confidence 3566654 455567788999998754 322 245666666665532 2 46877665 224566
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 95 ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEc
Confidence 6665543333456666653
No 89
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=71.75 E-value=72 Score=34.42 Aligned_cols=43 Identities=26% Similarity=0.343 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHH-hcCCCceEE
Q psy17603 196 RPRIQALVEAGADILAIETI-PASKEAQMLCRLLR-EWPHQKAWL 238 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~-~~~~~pv~v 238 (591)
.++++.++++|+|++.+.+- +........++.++ .+++.|+++
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~ 302 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIA 302 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEe
Confidence 46788899999999999764 33444555555665 456778775
No 90
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=71.40 E-value=19 Score=35.86 Aligned_cols=77 Identities=9% Similarity=0.110 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQV 257 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~~ 257 (591)
++.+. ++..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..++
T Consensus 20 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 86 (292)
T 3daq_A 20 VNLEA----LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKS 86 (292)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 45555 4455667889999987654 333 246666666665542 245877654 12355666
Q ss_pred HHHHHhhCCCCeEEEEec
Q psy17603 258 ARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 258 ~~~~~~~~~~~~~aiGvN 275 (591)
++........+++++.+-
T Consensus 87 i~la~~a~~~Gadavlv~ 104 (292)
T 3daq_A 87 IQASIQAKALGADAIMLI 104 (292)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 665543233455665553
No 91
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=71.22 E-value=60 Score=32.91 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=29.6
Q ss_pred CChHHHHHHHHHHHhc-C--CcEEeecCCC----CHHHHHHHHHHhhh
Q psy17603 367 DLCEPVDKYVTDWLDE-G--VALVGGCCRT----YAEDTLHMKHRLDD 407 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~-G--v~~VGgcCgt----gP~~i~~l~~~l~~ 407 (591)
.+++.+.+.++++++. | -.+++.-||. .|++++++++..++
T Consensus 303 ~~~e~i~~~v~~~l~~~~~~g~I~~~g~gi~~~~~~enl~a~ve~v~~ 350 (353)
T 1j93_A 303 GSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKG 350 (353)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEBCBSSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEeCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4567888777777653 4 4788888975 66888888887654
No 92
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=70.98 E-value=20 Score=35.28 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=53.3
Q ss_pred HHHHHHHHcCCCEEEecccC--------CHHHHHHHHHHHHhc---CCCceEEEEEecCCCcccCCCCHHHHHHHHHhhC
Q psy17603 197 PRIQALVEAGADILAIETIP--------ASKEAQMLCRLLREW---PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMN 265 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~--------~~~Ea~aa~~a~~~~---~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~ 265 (591)
+-++.|+++|++.+-+|--. +..|...-++++++. .+.|+.|....+. .+ .|.+
T Consensus 97 ~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~--~~-~g~~------------ 161 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDA--VK-LGAD------------ 161 (255)
T ss_dssp HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECH--HH-HCTT------------
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEech--hh-ccCC------------
Confidence 34556778999999999753 223443333333321 1567766664431 00 0100
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHH
Q psy17603 266 PDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324 (591)
Q Consensus 266 ~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~ 324 (591)
. ..+.+..+++..+ +|.++|+|.+++|..++.++++...+.
T Consensus 162 -~----------~~~~~~~ai~ra~-------a~~eAGAd~i~~e~~~~~~~~~~i~~~ 202 (255)
T 2qiw_A 162 -V----------FEDPMVEAIKRIK-------LMEQAGARSVYPVGLSTAEQVERLVDA 202 (255)
T ss_dssp -T----------SSSHHHHHHHHHH-------HHHHHTCSEEEECCCCSHHHHHHHHTT
T ss_pred -c----------chHHHHHHHHHHH-------HHHHcCCcEEEEcCCCCHHHHHHHHHh
Confidence 0 0122344454443 245689999999999988887766543
No 93
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=70.95 E-value=50 Score=33.22 Aligned_cols=77 Identities=9% Similarity=0.130 Sum_probs=44.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc-CCCceEEEEEecCCCcccCCCCHHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQV 257 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~~~~~~ 257 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..++
T Consensus 25 ~iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~a 91 (313)
T 3dz1_A 25 KIDDVSI----DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAM 91 (313)
T ss_dssp CBCHHHH----HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHH
Confidence 4566654 455567788999977653 433 245666666665543 345777643 22456667
Q ss_pred HHHHHhhCCCCeEEEEe
Q psy17603 258 ARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 258 ~~~~~~~~~~~~~aiGv 274 (591)
++........+++++.+
T Consensus 92 i~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMI 108 (313)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 66554333345566655
No 94
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=70.30 E-value=94 Score=31.25 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=48.0
Q ss_pred HHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCC
Q psy17603 199 IQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR 278 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~ 278 (591)
+.+..++|.-.++.-.+-+.++++..++.+++..+.|+-|.+.+.+ ..+.+.++.+.+ .+++.|-++...
T Consensus 43 a~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~-------~~~~~~~~~~~~---~g~d~V~l~~g~ 112 (326)
T 3bo9_A 43 AAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVS-------PWADDLVKVCIE---EKVPVVTFGAGN 112 (326)
T ss_dssp HHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTS-------TTHHHHHHHHHH---TTCSEEEEESSC
T ss_pred HHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccC-------CCHHHHHHHHHH---CCCCEEEECCCC
Confidence 3445567765555555557777777788888766789888876521 235566666643 344555555545
Q ss_pred chhhHHHHHHHHh
Q psy17603 279 PLMVSSLIEQLKT 291 (591)
Q Consensus 279 p~~i~~~l~~l~~ 291 (591)
|.. .++.++.
T Consensus 113 p~~---~~~~l~~ 122 (326)
T 3bo9_A 113 PTK---YIRELKE 122 (326)
T ss_dssp CHH---HHHHHHH
T ss_pred cHH---HHHHHHH
Confidence 643 3444443
No 95
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=70.18 E-value=4.3 Score=41.09 Aligned_cols=44 Identities=25% Similarity=0.269 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~ 241 (591)
--+|+++|.++|+|.|.+|-+.+.+|.+.+++.+ ++.|+.+.+.
T Consensus 172 Ai~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~---~~~Pl~~n~~ 215 (302)
T 3fa4_A 172 SVARLRAARDAGADVGFLEGITSREMARQVIQDL---AGWPLLLNMV 215 (302)
T ss_dssp HHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHT---TTSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHh---cCCceeEEEe
Confidence 4478899999999999999999999988777664 3578877663
No 96
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=70.08 E-value=65 Score=32.74 Aligned_cols=42 Identities=14% Similarity=-0.073 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
+++.+.+.++.+.++|++.|.+|=.. .|..+.++++.+++..
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhc
Confidence 46778888888899999999886433 5999999999887753
No 97
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=69.35 E-value=50 Score=32.80 Aligned_cols=77 Identities=10% Similarity=0.132 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVA 258 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~ 258 (591)
.++.+.++ ..++.+++.|+|.|++- |-+ +.+|-+.+++.+.+..+- ++ ..+ .+.+..+++
T Consensus 16 ~iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-vi-aGv--------g~~~t~~ai 81 (293)
T 1w3i_A 16 RIDKEKLK----IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-II-FQV--------GGLNLDDAI 81 (293)
T ss_dssp SBCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EE-EEC--------CCSCHHHHH
T ss_pred CcCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EE-Eec--------CCCCHHHHH
Confidence 35666644 45557788999977653 322 346767777777754322 33 331 234566777
Q ss_pred HHHHhhCCCCeEEEEec
Q psy17603 259 RTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 259 ~~~~~~~~~~~~aiGvN 275 (591)
+........+++++.+-
T Consensus 82 ~la~~A~~~Gadavlv~ 98 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASY 98 (293)
T ss_dssp HHHHHGGGSCCSEEEEE
T ss_pred HHHHHHHhcCCCEEEEc
Confidence 76654444566666664
No 98
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=68.93 E-value=35 Score=34.89 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=54.0
Q ss_pred CCCHHHHH---HHHHHHHHHHHHcCCCEEEecccC----------C-----------H-HH---HHHHHHHHHhcC--CC
Q psy17603 185 HVSEATMA---EWHRPRIQALVEAGADILAIETIP----------A-----------S-KE---AQMLCRLLREWP--HQ 234 (591)
Q Consensus 185 ~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET~~----------~-----------~-~E---a~aa~~a~~~~~--~~ 234 (591)
.++.+|+. +.|.+-++...++|.|.|-+.--. . + .. +..+++++|+.- +.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 46776665 556667777788999998765421 1 1 11 345566666432 56
Q ss_pred ceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 235 KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 235 pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
|+.|-++..+ ....|.++++.++.+......+++.|-+-+
T Consensus 221 pV~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 221 PLFVRVSATD--WGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp CEEEEEESCC--CSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7887776543 234577777766554433345677766653
No 99
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.89 E-value=43 Score=31.14 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=25.4
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLS 239 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vS 239 (591)
..+.++.+.++|+|+|-+.. .+....+.+.+..+.+ +.|++|.
T Consensus 21 ~~~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~-~~~l~vg 63 (212)
T 2v82_A 21 ALAHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAY-GDKALIG 63 (212)
T ss_dssp HHHHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHH-TTTSEEE
T ss_pred HHHHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhC-CCCeEEE
Confidence 34566678889999998743 3333333343333443 4677773
No 100
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=68.71 E-value=52 Score=39.42 Aligned_cols=42 Identities=5% Similarity=-0.093 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++++.++|++.|.+|=.. .|..+..+++.+++.
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 750 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREA 750 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHh
Confidence 356788888999999999999887433 599999999998775
No 101
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=68.13 E-value=29 Score=37.94 Aligned_cols=85 Identities=8% Similarity=-0.014 Sum_probs=54.3
Q ss_pred CCCccceee-cccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHH
Q psy17603 302 SGEHILAIE-TIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL 380 (591)
Q Consensus 302 aG~D~l~iE-T~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~ 380 (591)
+|+|.+-|- -.++...++.+++.+++.+. .+.++.+. .++ +..+++.+.+.++++.
T Consensus 129 aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~--------------~v~~~i~~------~~~---~~~~~e~~~~~a~~l~ 185 (539)
T 1rqb_A 129 NGMDVFRVFDAMNDPRNMAHAMAAVKKAGK--------------HAQGTICY------TIS---PVHTVEGYVKLAGQLL 185 (539)
T ss_dssp TTCCEEEECCTTCCTHHHHHHHHHHHHTTC--------------EEEEEEEC------CCS---TTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEEehhHHHHHHHHHHHHHHCCC--------------eEEEEEEe------eeC---CCCCHHHHHHHHHHHH
Confidence 355555333 34556777788888887641 12111100 011 1235678889999999
Q ss_pred hcCCcEEeecCC---CCHHHHHHHHHHhhhcc
Q psy17603 381 DEGVALVGGCCR---TYAEDTLHMKHRLDDWV 409 (591)
Q Consensus 381 ~~Gv~~VGgcCg---tgP~~i~~l~~~l~~~~ 409 (591)
++|++.|.+|=. ..|..+..+++.+++..
T Consensus 186 ~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 186 DMGADSIALKDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp HTTCSEEEEEETTCCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhc
Confidence 999999998732 35999999999987753
No 102
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=68.12 E-value=42 Score=34.57 Aligned_cols=42 Identities=10% Similarity=-0.031 Sum_probs=31.3
Q ss_pred CChHHHHHHHHHHHhc----CCcEEeecCCCC----HHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDE----GVALVGGCCRTY----AEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~----Gv~~VGgcCgtg----P~~i~~l~~~l~~~ 408 (591)
.+++++.+.++++++. +-.|++.-||.. |++++++++.+++.
T Consensus 309 gt~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 309 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp SCHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 3567788777777643 358999999874 68888888877664
No 103
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=67.93 E-value=1.1e+02 Score=31.07 Aligned_cols=43 Identities=7% Similarity=-0.140 Sum_probs=35.0
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
.+++.+.+.++.+.+.|++.|..|=.+ .|..+.++++.+++..
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhc
Confidence 456788888888889999999887444 3999999999998764
No 104
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=67.83 E-value=12 Score=38.65 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEec
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK 243 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~ 243 (591)
-..|++.|.++|+|++=+ |+|+.++++ ++..+++..+.|++.-+.|+
T Consensus 48 tv~Qi~~l~~aG~diVRv-avp~~~~a~-al~~I~~~~~vPlvaDiHf~ 94 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRV-AVPHKEDVE-ALEEIVKKSPMPVIADIHFA 94 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE-ECCSHHHHH-HHHHHHHHCSSCEEEECCSC
T ss_pred HHHHHHHHHHcCCCEEEe-CCCChHHHH-HHHHHHhcCCCCEEEeCCCC
Confidence 456888999999999987 888866654 45555544678988776554
No 105
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=67.66 E-value=55 Score=33.13 Aligned_cols=164 Identities=9% Similarity=0.011 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhh
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIETIP-ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNM 264 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~-~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~ 264 (591)
++.++..++.+ .|.++|+|.|-+-.+. +..+...+.++.+..++.+ +..+. ... . ..++.+++.+
T Consensus 25 ~~~~~Kl~ia~----~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~-i~~l~-r~~---~--~~i~~a~~al--- 90 (325)
T 3eeg_A 25 LNTEEKIIVAK----ALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPT-ICALT-RAK---E--ADINIAGEAL--- 90 (325)
T ss_dssp CCTTHHHHHHH----HHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSE-EEEEC-CSC---H--HHHHHHHHHH---
T ss_pred CCHHHHHHHHH----HHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCE-EEEee-cCC---H--HHHHHHHHhh---
Confidence 45566666655 6778899998765432 3445544444444444332 32331 111 0 1234444444
Q ss_pred CCCCeEEEEecC-CCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhccccccccccccCCCC
Q psy17603 265 NPDQLIAVGVNC-VRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTEN 343 (591)
Q Consensus 265 ~~~~~~aiGvNC-~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~ 343 (591)
...++..|.+-+ +++.+... .++...+ ..++.++.+++.+++.+
T Consensus 91 ~~ag~~~v~i~~s~Sd~~~~~---~l~~s~~------------------e~l~~~~~~v~~a~~~g-------------- 135 (325)
T 3eeg_A 91 RFAKRSRIHTGIGSSDIHIEH---KLRSTRE------------------NILEMAVAAVKQAKKVV-------------- 135 (325)
T ss_dssp TTCSSEEEEEEEECSHHHHC-------CCCT------------------TGGGTTHHHHHHHHTTS--------------
T ss_pred cccCCCEEEEEecccHHHHHH---HhCCCHH------------------HHHHHHHHHHHHHHHCC--------------
Confidence 234555665544 33333221 1221110 12445666777777653
Q ss_pred cceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 344 IPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 344 ~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
..+.. +.++ . ...+++.+.+.++.+.++|++.|.+|=.. .|..+..+++.+++..
T Consensus 136 ~~v~f----~~~d---~----~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 136 HEVEF----FCED---A----GRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp SEEEE----EEET---G----GGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred CEEEE----Eccc---c----ccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 11111 1111 1 12456788899999999999998877543 7999999999887753
No 106
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=67.62 E-value=94 Score=31.08 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=23.7
Q ss_pred HHHHcCCCEEEeccc--CCH------HHHHHHHHHHHhcCCCceEEEE
Q psy17603 201 ALVEAGADILAIETI--PAS------KEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~--~~~------~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
..++.|+|.+-+=.+ ++. .+++.+.+.++++ ++|+++-.
T Consensus 116 ~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~-G~p~lv~~ 162 (304)
T 1to3_A 116 AVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN-GLLSIIEP 162 (304)
T ss_dssp HHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred HHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence 356789999863332 222 3455555666653 78988765
No 107
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=67.14 E-value=56 Score=33.93 Aligned_cols=65 Identities=18% Similarity=0.106 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHhc-CCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEE
Q psy17603 196 RPRIQALVEAGADILAIET-IPASKEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVG 273 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiG 273 (591)
.++++.++++|+|++.+++ ..+.......++.+++. ++.|+++.. +.+.+++ +.+. ..++++|.
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~----------v~~~~~a-~~a~---~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGN----------IVTKEAA-LDLI---SVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHH-HHHH---TTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcC----------CCcHHHH-HHHH---hcCCCEEE
Confidence 3556677889999999864 33444556666777754 478988721 2344444 3332 24667776
Q ss_pred e
Q psy17603 274 V 274 (591)
Q Consensus 274 v 274 (591)
+
T Consensus 221 v 221 (404)
T 1eep_A 221 V 221 (404)
T ss_dssp E
T ss_pred E
Confidence 6
No 108
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=66.88 E-value=1e+02 Score=31.12 Aligned_cols=166 Identities=11% Similarity=0.087 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccCCH------------------HHHHHHHHHHHhcCCCceEEEEEecCCCcc
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIPAS------------------KEAQMLCRLLREWPHQKAWLSFSCKDDKHI 248 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~------------------~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l 248 (591)
..+.+.++|++++ +.|+.++++|...-. ...+.+.+++++. +.++++++.= .|+.
T Consensus 37 ~~~~~~~~y~~rA----~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~-g~~i~~QL~h--~Gr~ 109 (338)
T 1z41_A 37 LTPFHMAHYISRA----IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQ-GSKIGIQLAH--AGRK 109 (338)
T ss_dssp CCHHHHHHHHHHH----HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHT-TCEEEEEEEC--CGGG
T ss_pred CCHHHHHHHHHHH----cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhc-CCEEEEEecC--CCcc
Confidence 3477788888764 479999999964211 1234555566653 6688887742 1111
Q ss_pred ------------------------cCCCC-------HHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceE
Q psy17603 249 ------------------------SNGES-------FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLV 297 (591)
Q Consensus 249 ------------------------~~G~~-------~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~ 297 (591)
++-+. +.++++.+. ..+.++|-|||.+...+.+.+......+.
T Consensus 110 ~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~---~aGfDgVeih~~~gyLl~qFlsp~~n~R~--- 183 (338)
T 1z41_A 110 AELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAK---EAGFDVIEIHAAHGYLIHEFLSPLSNHRT--- 183 (338)
T ss_dssp CCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHH---HTTCSEEEEEECTTSHHHHHHCTTTCCCC---
T ss_pred cCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHH---HcCCCEEEeccccchHHHHccCCCcCCcC---
Confidence 11111 223333332 36889999999887766666544322110
Q ss_pred EecCCCCccceeecccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHH
Q psy17603 298 VYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVT 377 (591)
Q Consensus 298 ~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~ 377 (591)
-+.|-.+ | ....-+...++++|+.- +.||.+-.+..... .+ +.+.++..++++
T Consensus 184 --d~yGGsl---e--nr~r~~~eiv~avr~~v-------------~~pv~vris~~~~~---~~----g~~~~~~~~~a~ 236 (338)
T 1z41_A 184 --DEYGGSP---E--NRYRFLREIIDEVKQVW-------------DGPLFVRVSASDYT---DK----GLDIADHIGFAK 236 (338)
T ss_dssp --STTSSSH---H--HHHHHHHHHHHHHHHHC-------------CSCEEEEEECCCCS---TT----SCCHHHHHHHHH
T ss_pred --cccCcch---h--hhHHHHHHHHHHHHHHc-------------CCcEEEEecCcccC---CC----CCCHHHHHHHHH
Confidence 0112111 1 11222344455555431 35666543322111 11 334567788888
Q ss_pred HHHhcCCcEEeecCC
Q psy17603 378 DWLDEGVALVGGCCR 392 (591)
Q Consensus 378 ~~~~~Gv~~VGgcCg 392 (591)
.+.+.|+++|-.-.+
T Consensus 237 ~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 237 WMKEQGVDLIDCSSG 251 (338)
T ss_dssp HHHHTTCCEEEEECC
T ss_pred HHHHcCCCEEEEecC
Confidence 888999998877554
No 109
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=66.64 E-value=63 Score=32.52 Aligned_cols=23 Identities=9% Similarity=-0.012 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhcCCcEEeecCC
Q psy17603 370 EPVDKYVTDWLDEGVALVGGCCR 392 (591)
Q Consensus 370 ~~~~~~~~~~~~~Gv~~VGgcCg 392 (591)
+++.+.++.+.+.|++.|-...+
T Consensus 225 ~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 225 EELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCC
Confidence 46667777778999998876544
No 110
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=66.45 E-value=43 Score=33.17 Aligned_cols=76 Identities=9% Similarity=0.043 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVAR 259 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~ 259 (591)
++.+.+ ++.++.+++.|+|.|++- |-+ +.+|-+.+++.+.+..+. ++ ..+ .+.+..++++
T Consensus 16 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi-~Gv--------g~~~t~~ai~ 81 (286)
T 2r91_A 16 LDPELF----ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VI-VQV--------ASLNADEAIA 81 (286)
T ss_dssp ECHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EE-EEC--------CCSSHHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EE-Eee--------CCCCHHHHHH
Confidence 566554 445567788999988653 322 346666777766653322 33 321 2335566666
Q ss_pred HHHhhCCCCeEEEEec
Q psy17603 260 TCYNMNPDQLIAVGVN 275 (591)
Q Consensus 260 ~~~~~~~~~~~aiGvN 275 (591)
........+++++.+-
T Consensus 82 la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 82 LAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhcCCCEEEEc
Confidence 5543334566666654
No 111
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=65.63 E-value=1.1e+02 Score=30.33 Aligned_cols=44 Identities=14% Similarity=-0.132 Sum_probs=34.9
Q ss_pred CCChHHHHHHHHHHHhcCCcEEeecC---CCCHHHHHHHHHHhhhcc
Q psy17603 366 RDLCEPVDKYVTDWLDEGVALVGGCC---RTYAEDTLHMKHRLDDWV 409 (591)
Q Consensus 366 ~~~~~~~~~~~~~~~~~Gv~~VGgcC---gtgP~~i~~l~~~l~~~~ 409 (591)
..+++.+.++++.+.+.|++.|.+|= ...|..+.++++.+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 35678899999988999999987661 136999999999987653
No 112
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=65.20 E-value=1.1e+02 Score=30.27 Aligned_cols=43 Identities=9% Similarity=-0.035 Sum_probs=35.1
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
.+++.+.+.++.+.+.|++.|.+|=.+ .|..+..+++.+++..
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 456788889999999999998887644 7999999998887653
No 113
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=65.11 E-value=36 Score=34.16 Aligned_cols=78 Identities=13% Similarity=-0.000 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ +..++.++++|+|.|++- |-+ +.+|-+.+++.+.+. ...|+++.. .+.+..+
T Consensus 31 ~iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 97 (307)
T 3s5o_A 31 EVDYGKL----EENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQA 97 (307)
T ss_dssp CBCHHHH----HHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHH
Confidence 4666654 455567789999987653 322 346766777776653 235766543 1235666
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 98 ai~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 6665543333556666653
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=65.10 E-value=54 Score=35.04 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHHh-cCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEE
Q psy17603 195 HRPRIQALVEAGADILAIETI-PASKEAQMLCRLLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAV 272 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~~-~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ai 272 (591)
+.++++.++++|+|.+.+.+. .........++.+++ +++.|+++. .+.+.+++. .+.+ .++++|
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~-~l~~---~G~d~I 303 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTE-ALIK---AGADAV 303 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHH-HHHH---TTCSEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHH-HHHH---cCCCEE
Confidence 346888899999999998653 444455556666664 457888762 234566653 3322 456666
Q ss_pred Eec
Q psy17603 273 GVN 275 (591)
Q Consensus 273 GvN 275 (591)
-+.
T Consensus 304 ~v~ 306 (494)
T 1vrd_A 304 KVG 306 (494)
T ss_dssp EEC
T ss_pred EEc
Confidence 663
No 115
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=64.41 E-value=48 Score=33.07 Aligned_cols=26 Identities=8% Similarity=0.206 Sum_probs=20.7
Q ss_pred ecCCCCccceeecccccHHHHHHHHH
Q psy17603 299 YPNSGEHILAIETIPASKEAQMLCRL 324 (591)
Q Consensus 299 l~~aG~D~l~iET~~d~~E~~~a~~~ 324 (591)
|.++|+|.+++|..++.++++...+.
T Consensus 177 y~eAGAd~i~~e~~~~~~~~~~i~~~ 202 (287)
T 3b8i_A 177 YQEAGADGICLVGVRDFAHLEAIAEH 202 (287)
T ss_dssp HHHTTCSEEEEECCCSHHHHHHHHTT
T ss_pred HHHcCCCEEEecCCCCHHHHHHHHHh
Confidence 45689999999999988888766543
No 116
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=62.12 E-value=1.3e+02 Score=29.80 Aligned_cols=66 Identities=18% Similarity=0.242 Sum_probs=41.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEE-EecccCC--HHHHHHHHHHHHh-cCCCceEEEEEecCCCcccCCCCHHHHHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADIL-AIETIPA--SKEAQMLCRLLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTC 261 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i-~~ET~~~--~~Ea~aa~~a~~~-~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~ 261 (591)
.+.+.+.+. ++.+.+.|+|.| +..|++. ..++...++.+++ +++.| +++-+.++ .|..+..+...+
T Consensus 153 ~~~~~~~~~----~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--i~~H~Hn~----~Gla~An~laA~ 222 (298)
T 2cw6_A 153 ISPAKVAEV----TKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA--LAVHCHDT----YGQALANTLMAL 222 (298)
T ss_dssp CCHHHHHHH----HHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGG--EEEEEBCT----TSCHHHHHHHHH
T ss_pred CCHHHHHHH----HHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECCC----CchHHHHHHHHH
Confidence 356655554 457788999987 4456654 5677778888874 34344 57777654 354455555555
No 117
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=61.94 E-value=68 Score=32.63 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=30.1
Q ss_pred CChHHHHHHHHHHHhcC----CcEEeecCCC----CHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEG----VALVGGCCRT----YAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~G----v~~VGgcCgt----gP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++++++.| -.+++.-||. .|+.++++++.++..
T Consensus 300 ~t~e~I~~~v~~~l~~~~~~~g~Il~~gcgi~~~~~~enl~a~ve~v~~~ 349 (359)
T 2inf_A 300 APWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEY 349 (359)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 35778888777776433 3688888975 458888888877664
No 118
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.68 E-value=77 Score=29.21 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=26.3
Q ss_pred HHHHHcCCCEEEecccCC-HHHHHHHHHHHHhc-CCCceEEEEEec
Q psy17603 200 QALVEAGADILAIETIPA-SKEAQMLCRLLREW-PHQKAWLSFSCK 243 (591)
Q Consensus 200 ~~l~~aGvD~i~~ET~~~-~~Ea~aa~~a~~~~-~~~pv~vSf~~~ 243 (591)
+.+ ..|+|+|-.-+ |. +.....+++.+|+. ++.|+++.+-+.
T Consensus 20 ~~~-~~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~ 63 (211)
T 3f4w_A 20 DKV-VDDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIM 63 (211)
T ss_dssp HHH-GGGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEEC
T ss_pred HHh-hcCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEec
Confidence 344 36899986554 44 44555566667654 678887766553
No 119
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=61.66 E-value=42 Score=34.68 Aligned_cols=78 Identities=12% Similarity=-0.023 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC-----CHHHHHHHHHHHHh-cC-CCceEEEEEecCCCcccCCCCHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIE-TIP-----ASKEAQMLCRLLRE-WP-HQKAWLSFSCKDDKHISNGESFTQ 256 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~-----~~~Ea~aa~~a~~~-~~-~~pv~vSf~~~~~g~l~~G~~~~~ 256 (591)
.++.+.+ ++.++.++++|+|.|++- |-+ +.+|-+.+++.+.+ .. ..|+++.. .+.+..+
T Consensus 76 ~ID~~al----~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~e 142 (360)
T 4dpp_A 76 RFDLEAY----DDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---------GSNSTRE 142 (360)
T ss_dssp SBCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHH
Confidence 3566654 445567788999987763 333 24565556655543 23 35777543 2345667
Q ss_pred HHHHHHhhCCCCeEEEEec
Q psy17603 257 VARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 257 ~~~~~~~~~~~~~~aiGvN 275 (591)
+++........+++++.+-
T Consensus 143 ai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 143 AIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7666543333556666553
No 120
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=61.61 E-value=1e+02 Score=30.43 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=24.5
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEe
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSC 242 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~ 242 (591)
.|+++|++.+-+|--. |...-++++.+ .+.||+--+=+
T Consensus 103 rl~kaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGL 140 (275)
T 1o66_A 103 ELMAAGAHMVKLEGGV---WMAETTEFLQM-RGIPVCAHIGL 140 (275)
T ss_dssp HHHHTTCSEEEEECSG---GGHHHHHHHHH-TTCCEEEEEES
T ss_pred HHHHcCCcEEEECCcH---HHHHHHHHHHH-cCCCeEeeecc
Confidence 3667999999999753 33334444444 47898855533
No 121
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=61.41 E-value=1.5e+02 Score=30.46 Aligned_cols=43 Identities=7% Similarity=-0.069 Sum_probs=35.4
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhhcc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~~~ 409 (591)
.+++.+.+.++.+.+.|++.|.+|=.. .|..+.++++.+++..
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 456788899999999999999887644 5999999999887753
No 122
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=61.25 E-value=4.6 Score=40.59 Aligned_cols=39 Identities=23% Similarity=0.199 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
-.+|+++|.++|+|.|++|.+++.++++.+.+.+ ..|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL----HIPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC----CSCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC----CCCEE
Confidence 3467889999999999999999998987776543 36776
No 123
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=61.07 E-value=50 Score=33.79 Aligned_cols=97 Identities=11% Similarity=0.022 Sum_probs=51.0
Q ss_pred CCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeE-EEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceee
Q psy17603 232 PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI-AVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIE 310 (591)
Q Consensus 232 ~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~-aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iE 310 (591)
.+.|+++++. |.+.++.++.+......+.+ +|=+||..|..- ++.+
T Consensus 127 ~~~pvivsI~---------g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~-------------------G~~~----- 173 (345)
T 3oix_A 127 DSKNHFLSLV---------GMSPEETHTILXMVEASKYQGLVELNLSCPNVP-------------------GXPQ----- 173 (345)
T ss_dssp TCCCCEEEEC---------CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST-------------------TCCC-----
T ss_pred CCCCEEEEec---------CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC-------------------Cchh-----
Confidence 4678888772 34444444433221112333 777888766531 0111
Q ss_pred cccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEE
Q psy17603 311 TIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALV 387 (591)
Q Consensus 311 T~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~V 387 (591)
-+.|.+.+...++++++.. ++||.+....+ .+..++++.++.....|++.|
T Consensus 174 l~~~~e~l~~il~av~~~~-------------~~PV~vKi~p~-------------~~~~~~a~~~~~aga~~i~~i 224 (345)
T 3oix_A 174 IAYDFETTDQILSEVFTYF-------------TKPLGIKLPPY-------------FDIVHFDQAAAIFNXYPLTFV 224 (345)
T ss_dssp GGGCHHHHHHHHHHHTTTC-------------CSCEEEEECCC-------------CCHHHHHHHHHHHTTSCCSEE
T ss_pred hcCCHHHHHHHHHHHHHHh-------------CCCeEEEECCC-------------CCHHHHHHHHHHhCCCceEEE
Confidence 1245556667777777642 47887743321 134567777765545555543
No 124
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=60.12 E-value=81 Score=31.56 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhcCCcEEeecCC----CCHHHHHHHHHHhhh
Q psy17603 370 EPVDKYVTDWLDEGVALVGGCCR----TYAEDTLHMKHRLDD 407 (591)
Q Consensus 370 ~~~~~~~~~~~~~Gv~~VGgcCg----tgP~~i~~l~~~l~~ 407 (591)
+.+...++.+.++|+++|+..-. .+++.+.++.+....
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~ 218 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNG 218 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccc
Confidence 66777788888999999998774 367888888776544
No 125
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=60.12 E-value=1.1e+02 Score=31.06 Aligned_cols=80 Identities=14% Similarity=0.194 Sum_probs=46.3
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCC--CHHHHHHHHHhh-CCCCeEEEEecC-
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGE--SFTQVARTCYNM-NPDQLIAVGVNC- 276 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~--~~~~~~~~~~~~-~~~~~~aiGvNC- 276 (591)
.+.+.|+|+|-++.-.++.|++.. +. ..+.+.+.+.+ . +..|+ .+.+.++.+.+. .. +-..++..|
T Consensus 271 ~l~~~g~d~i~~d~~~dl~~a~~~------~g-~~~~l~Gnldp-~-~L~gt~e~i~~~v~~~l~~~g~-~g~I~~~ghg 340 (367)
T 1r3s_A 271 ELAQAGYEVVGLDWTVAPKKAREC------VG-KTVTLQGNLDP-C-ALYASEEEIGQLVKQMLDDFGP-HRYIANLGHG 340 (367)
T ss_dssp HHTTSSCSEEECCTTSCHHHHHHH------HC-SSSEEEEEECG-G-GGGSCHHHHHHHHHHHHHHHCS-SSEEEEESSC
T ss_pred HHHhcCCCEEEeCCCCCHHHHHHH------cC-CCeEEEeCCCh-H-HhcCCHHHHHHHHHHHHHHhCC-CCeeecCCCC
Confidence 566889999999876778775443 22 33556777776 3 33453 244444444332 22 445666677
Q ss_pred ----CCchhhHHHHHHHH
Q psy17603 277 ----VRPLMVSSLIEQLK 290 (591)
Q Consensus 277 ----~~p~~i~~~l~~l~ 290 (591)
+.|+.+..+++..+
T Consensus 341 i~~~~p~env~a~v~~v~ 358 (367)
T 1r3s_A 341 LYPDMDPEHVGAFVDAVH 358 (367)
T ss_dssp CCTTCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 34555655555443
No 126
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=59.94 E-value=4.5 Score=39.95 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
-.+|+++|.++|+|.|++|.+++..+++.+.+.+ ..|+-
T Consensus 170 ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~n 208 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV----SVPVN 208 (255)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC----SSCBE
T ss_pred HHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC----CCCEE
Confidence 3457889999999999999999988887776543 35663
No 127
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=59.68 E-value=1.6e+02 Score=30.04 Aligned_cols=45 Identities=13% Similarity=0.008 Sum_probs=28.1
Q ss_pred HHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecC
Q psy17603 200 QALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244 (591)
Q Consensus 200 ~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~ 244 (591)
.+..++|.=.++.-.+-+.++++..++.+++..+.|+-|.+.+..
T Consensus 29 ~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~ 73 (369)
T 3bw2_A 29 AAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLTGRPFGVNVFMPQ 73 (369)
T ss_dssp HHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHCCSCEEEEEECCC
T ss_pred HHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 344566654444445556777777777777656678777776543
No 128
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=59.16 E-value=4.8 Score=41.07 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=23.2
Q ss_pred EecCCCCccceeecccccHHHHHHHHHH
Q psy17603 298 VYPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 298 ~l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
+|.++|+|.+++|.+++.++++...+.+
T Consensus 197 Ay~eAGAd~i~~e~~~~~e~~~~i~~~l 224 (318)
T 1zlp_A 197 LYKEAGADATFVEAPANVDELKEVSAKT 224 (318)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHS
T ss_pred HHHHcCCCEEEEcCCCCHHHHHHHHHhc
Confidence 4567999999999999988888776653
No 129
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=59.14 E-value=56 Score=32.77 Aligned_cols=53 Identities=23% Similarity=0.349 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEe-cccCC--HHHHHHHHHHHHh-cCCCceEEEEEecC
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAI-ETIPA--SKEAQMLCRLLRE-WPHQKAWLSFSCKD 244 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~-ET~~~--~~Ea~aa~~a~~~-~~~~pv~vSf~~~~ 244 (591)
.+++.+.++. +.+.+.|+|.|.+ .|++. ..++...++.+++ +++. -+++-+.+
T Consensus 154 ~~~~~~~~~~----~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~--~l~~H~Hn 210 (307)
T 1ydo_A 154 VPIEQVIRLS----EALFEFGISELSLGDTIGAANPAQVETVLEALLARFPAN--QIALHFHD 210 (307)
T ss_dssp CCHHHHHHHH----HHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGG--GEEEECBG
T ss_pred CCHHHHHHHH----HHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCC--eEEEEECC
Confidence 3566555444 4677889997744 46553 5677778888875 3333 35665554
No 130
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=58.36 E-value=11 Score=40.07 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHh-cCCC
Q psy17603 196 RPRIQALVEAGADILAIET-IPASKEAQMLCRLLRE-WPHQ 234 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~-~~~~ 234 (591)
-+|.++|.+ |+|+|++|| .++..|++.+++.++. +|..
T Consensus 270 I~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~~~P~~ 309 (429)
T 1f8m_A 270 IARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAEYPDQ 309 (429)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcccCCCc
Confidence 356778887 899999998 8999999999999984 3443
No 131
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=57.17 E-value=11 Score=39.77 Aligned_cols=37 Identities=24% Similarity=0.212 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHHh-cCC
Q psy17603 196 RPRIQALVEAGADILAIETI-PASKEAQMLCRLLRE-WPH 233 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~~-~~~ 233 (591)
-+|.++|.+ |+|+|++|+. ++..|++.+++.++. +|.
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~ 312 (435)
T 3lg3_A 274 ISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQFPG 312 (435)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccccCC
Confidence 357778988 9999999996 799999999999985 453
No 132
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=57.01 E-value=12 Score=39.76 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHHh-cCC
Q psy17603 196 RPRIQALVEAGADILAIETI-PASKEAQMLCRLLRE-WPH 233 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~~-~~~ 233 (591)
-+|.++|.+ |+|+|++||- ++..|++.+++.++. +|.
T Consensus 269 I~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P~ 307 (433)
T 3eol_A 269 IARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKAHPG 307 (433)
T ss_dssp HHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcccCCC
Confidence 357778988 9999999996 799999999999984 453
No 133
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=56.46 E-value=1.6e+02 Score=29.06 Aligned_cols=47 Identities=6% Similarity=0.039 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCC-EEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEE
Q psy17603 195 HRPRIQALVEAGAD-ILAIETI-----------PASKEAQMLCRLLREWPHQKAWLSFS 241 (591)
Q Consensus 195 h~~~i~~l~~aGvD-~i~~ET~-----------~~~~Ea~aa~~a~~~~~~~pv~vSf~ 241 (591)
|.+.++.+.++|+| +|.++-- .+.+.+..+++++++..+.|+++-++
T Consensus 108 ~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~ 166 (311)
T 1jub_A 108 NIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLP 166 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 55666678889999 8887531 15556677788888655789887653
No 134
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.43 E-value=1.6e+02 Score=32.68 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=53.2
Q ss_pred CCCCHHHHH---HHHHHHHHHHHHcCCCEEEecc---c-------------------CCHH-H---HHHHHHHHHhcC--
Q psy17603 184 EHVSEATMA---EWHRPRIQALVEAGADILAIET---I-------------------PASK-E---AQMLCRLLREWP-- 232 (591)
Q Consensus 184 ~~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET---~-------------------~~~~-E---a~aa~~a~~~~~-- 232 (591)
..++.+|+. +.|.+-++...++|.|.+-+-- + ++++ . +..+++++|+..
T Consensus 144 ~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~ 223 (690)
T 3k30_A 144 RAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAG 223 (690)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 357777666 5566666667788999987721 1 1121 1 345556666432
Q ss_pred CCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC
Q psy17603 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277 (591)
Q Consensus 233 ~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~ 277 (591)
+.|+.+-++..+ ....|.++++.++.+..... +++.+.+...
T Consensus 224 ~~~v~~r~s~~~--~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~ 265 (690)
T 3k30_A 224 RAAVACRITVEE--EIDGGITREDIEGVLRELGE-LPDLWDFAMG 265 (690)
T ss_dssp SSEEEEEEECCC--CSTTSCCHHHHHHHHHHHTT-SSSEEEEECS
T ss_pred CceEEEEECccc--cCCCCCCHHHHHHHHHHHHh-hcCEEEEecc
Confidence 456666665533 34567777776665544333 5677777653
No 135
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=55.90 E-value=2.1e+02 Score=30.39 Aligned_cols=89 Identities=10% Similarity=0.219 Sum_probs=54.4
Q ss_pred HHHHHHcCCCEEEe-cccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEec--
Q psy17603 199 IQALVEAGADILAI-ETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN-- 275 (591)
Q Consensus 199 i~~l~~aGvD~i~~-ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvN-- 275 (591)
++...++|+|.|-+ -..+++..++.+++++++. +..+.+++++....+ .+++.+++.+......++..|.+-
T Consensus 106 v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~~Gad~I~l~DT 180 (464)
T 2nx9_A 106 VERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKM-GAHAQGTLCYTTSPV----HNLQTWVDVAQQLAELGVDSIALKDM 180 (464)
T ss_dssp HHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCCTT----CCHHHHHHHHHHHHHTTCSEEEEEET
T ss_pred HHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHC-CCEEEEEEEeeeCCC----CCHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 34567899998754 3556677778888888874 666665664433322 244444443332223455555552
Q ss_pred --CCCchhhHHHHHHHHhc
Q psy17603 276 --CVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 276 --C~~p~~i~~~l~~l~~~ 292 (591)
...|..+..+++.+++.
T Consensus 181 ~G~~~P~~v~~lv~~l~~~ 199 (464)
T 2nx9_A 181 AGILTPYAAEELVSTLKKQ 199 (464)
T ss_dssp TSCCCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHh
Confidence 35689898988888754
No 136
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=55.69 E-value=1.1e+02 Score=31.09 Aligned_cols=67 Identities=16% Similarity=0.002 Sum_probs=37.0
Q ss_pred cCCCEEEecccCCHHHHHHH-HHHHH-hcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCch
Q psy17603 205 AGADILAIETIPASKEAQML-CRLLR-EWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280 (591)
Q Consensus 205 aGvD~i~~ET~~~~~Ea~aa-~~a~~-~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~ 280 (591)
.|++++.+|.+..-.....- .+.++ .-.+.|+++++.-. +-+.+.++++.+. ..++++|-+||..|.
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~------~p~~~~~aA~~a~---~~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGS------DPKSLAEAARIGE---AFGYDEINLNLGCPS 95 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEECS------CHHHHHHHHHHHH---HTTCSEEEEEECCCS
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCCC------CHHHHHHHHHHHH---HcCCCEEEECCcCCC
Confidence 45699999987532211100 01222 11357999888521 1133555655553 357889999986654
No 137
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=55.00 E-value=13 Score=39.38 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHh-cC
Q psy17603 196 RPRIQALVEAGADILAIET-IPASKEAQMLCRLLRE-WP 232 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~-~~ 232 (591)
-+|.++|.+ |+|+|++|+ .++..|++.+++.++. +|
T Consensus 274 I~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P 311 (439)
T 3i4e_A 274 ISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFP 311 (439)
T ss_dssp HHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCC
Confidence 357778988 999999999 6899999999999884 44
No 138
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=54.21 E-value=56 Score=32.72 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=38.7
Q ss_pred HcCCCEEEecccCCHHHHH---HHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCch
Q psy17603 204 EAGADILAIETIPASKEAQ---MLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPL 280 (591)
Q Consensus 204 ~aGvD~i~~ET~~~~~Ea~---aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~ 280 (591)
+.|+++++.|.+....... ...+.+..-.+.|+++++. .. +-+.+.++++.+ ... .++|-+||..|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~-----~~~~~~~aa~~a---~~~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GS-----EPNELSEAARIL---SEK-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CS-----CHHHHHHHHHHH---TTT-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CC-----CHHHHHHHHHHH---HHh-CCEEEEECCCCc
Confidence 5699999999765322111 1111221124679999985 21 113344555554 335 899999997775
No 139
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=53.97 E-value=1.3e+02 Score=28.76 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=24.1
Q ss_pred HHHHHHHHcCCCEEEecccCCHHHHHHHHHHHH-hcCCCceEEEE
Q psy17603 197 PRIQALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSF 240 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~-~~~~~pv~vSf 240 (591)
+.+++++++|++.|-+ |+.+.. +..+++.++ ++++ .++-..
T Consensus 29 ~~a~al~~gGi~~iEv-t~~t~~-a~~~I~~l~~~~p~-~~IGAG 70 (217)
T 3lab_A 29 PMAKALVAGGVHLLEV-TLRTEA-GLAAISAIKKAVPE-AIVGAG 70 (217)
T ss_dssp HHHHHHHHTTCCEEEE-ETTSTT-HHHHHHHHHHHCTT-SEEEEE
T ss_pred HHHHHHHHcCCCEEEE-eCCCcc-HHHHHHHHHHHCCC-CeEeec
Confidence 4566899999998866 665533 333344444 5654 344333
No 140
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=53.71 E-value=21 Score=35.35 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=28.8
Q ss_pred HHHcCCCEEEecccCCHHHHHHHHHHHH-hcCCCceEEEEEe
Q psy17603 202 LVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242 (591)
Q Consensus 202 l~~aGvD~i~~ET~~~~~Ea~aa~~a~~-~~~~~pv~vSf~~ 242 (591)
.+++|+|+|.+-||+ +.+.+.+++.++ .+++.|+.+|.-+
T Consensus 198 A~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~i~AsGGI 238 (273)
T 2b7n_A 198 AMNAGADIVMCDNLS-VLETKEIAAYRDAHYPFVLLEASGNI 238 (273)
T ss_dssp HHHHTCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEESSC
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCcEEEEECCC
Confidence 345799999999975 677777777766 3566787777633
No 141
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=53.37 E-value=1.2e+02 Score=29.27 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=56.4
Q ss_pred HHHHHHHHcCCCEEEe-----cccCCHHHHHHHHHHHHhcC-CCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeE
Q psy17603 197 PRIQALVEAGADILAI-----ETIPASKEAQMLCRLLREWP-HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI 270 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~-----ET~~~~~Ea~aa~~a~~~~~-~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ 270 (591)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+.+ ++|+-+-+.+.+. .+.++.+.+ .+++
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p---------~~~i~~~~~---aGAd 111 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV---------DALIESFAK---AGAT 111 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSC---------HHHHHHHHH---HTCS
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCH---------HHHHHHHHH---cCCC
Confidence 4556777899998876 33466655556677777654 7888777765432 233444432 2445
Q ss_pred EEEecCCCchhhHHHHHHHHhcCCceEEecCC
Q psy17603 271 AVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302 (591)
Q Consensus 271 aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~a 302 (591)
.|-|=+-....+...++.+++....++..++-
T Consensus 112 ~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp 143 (246)
T 3inp_A 112 SIVFHPEASEHIDRSLQLIKSFGIQAGLALNP 143 (246)
T ss_dssp EEEECGGGCSCHHHHHHHHHTTTSEEEEEECT
T ss_pred EEEEccccchhHHHHHHHHHHcCCeEEEEecC
Confidence 55554433346677788887765555544443
No 142
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=53.30 E-value=22 Score=38.80 Aligned_cols=46 Identities=17% Similarity=0.351 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCEEEecccCC-HHHHHHHHHHHH-hcCCCceEEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIPA-SKEAQMLCRLLR-EWPHQKAWLSF 240 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~-~~Ea~aa~~a~~-~~~~~pv~vSf 240 (591)
..+|+++|+++|||+|++.|-.. .......++.+| .+|+.++++.-
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN 329 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN 329 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc
Confidence 45789999999999999998543 334455555565 46777766443
No 143
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=52.70 E-value=1e+02 Score=31.25 Aligned_cols=37 Identities=8% Similarity=-0.048 Sum_probs=24.6
Q ss_pred HHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecC
Q psy17603 200 QALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244 (591)
Q Consensus 200 ~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~ 244 (591)
+.+.+.|+|+|-++.-.++.+++ +. +..+.+.+.+.+
T Consensus 259 ~~l~~~g~d~~~~d~~~d~~~~~-------~~-g~~~~l~Gnldp 295 (359)
T 2inf_A 259 GDWHDLPLDVVGLDWRLGIDEAR-------SK-GITKTVQGNLDP 295 (359)
T ss_dssp HHHHTSSCSEEECCTTSCHHHHH-------HT-TCCSEEECCBCG
T ss_pred HHHHHhCCCEEEeCCCCCHHHHH-------Hc-CCCEEEEecCCh
Confidence 34668899999999665666542 23 444566776766
No 144
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=52.49 E-value=1.8e+02 Score=28.52 Aligned_cols=41 Identities=17% Similarity=0.041 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCCEEEecccCCHHH-HHHHHHHHHhcCCCceE
Q psy17603 197 PRIQALVEAGADILAIETIPASKE-AQMLCRLLREWPHQKAW 237 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~~~~E-a~aa~~a~~~~~~~pv~ 237 (591)
++++.|.++|++.|-+-|-+..-. -...++.+++..++|++
T Consensus 76 ~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl 117 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVL 117 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEE
Confidence 344566689999998887655322 12334444544578987
No 145
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=52.27 E-value=1.3e+02 Score=30.12 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=44.9
Q ss_pred HHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCC--CHHHHHHHHHhh-CCCCeEEEEe
Q psy17603 198 RIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGE--SFTQVARTCYNM-NPDQLIAVGV 274 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~--~~~~~~~~~~~~-~~~~~~aiGv 274 (591)
.++.+.+.|+|++-++.-.++.|++..+ .+.+.+.+.+ . +..|+ .+.+.++.+.+. ...+-..++.
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~---------~~~l~Gn~dp-~-~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~ 312 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY---------DKGFQGNLEP-A-VLYASEEVIEEKTLGLLRRIPVKTRYVFNL 312 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC---------CSEEECCBCG-G-GGGSCHHHHHHHHHHHHTTCCCSSSEEBCB
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC---------CeEEEECCCH-H-HhcCCHHHHHHHHHHHHHHhCCCCCeEEeC
Confidence 3445678899999999777888765432 2345555655 2 33453 233444444332 1112345556
Q ss_pred cC-----CCchhhHHHHHHHH
Q psy17603 275 NC-----VRPLMVSSLIEQLK 290 (591)
Q Consensus 275 NC-----~~p~~i~~~l~~l~ 290 (591)
.| +.|+.+..+++..+
T Consensus 313 g~gi~~~~p~en~~a~v~~v~ 333 (338)
T 2eja_A 313 GHGLAPDMELEKVKYLVDLVK 333 (338)
T ss_dssp SSCCCTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 67 33455555555444
No 146
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=51.82 E-value=1.8e+02 Score=28.25 Aligned_cols=89 Identities=19% Similarity=0.163 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCCEEEecccCC----------------------HHHHHHHHHHHHhc-CCCceEEEEE-ecCCCcccCC
Q psy17603 196 RPRIQALVEAGADILAIETIPA----------------------SKEAQMLCRLLREW-PHQKAWLSFS-CKDDKHISNG 251 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~~----------------------~~Ea~aa~~a~~~~-~~~pv~vSf~-~~~~g~l~~G 251 (591)
.+.++.+.++|+|+|-+..-.+ +.....+++.+|+. ++.|+.+ +. .++ -...|
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~n~--v~~~g 110 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYANL--VFNNG 110 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECHHH--HHTTC
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEcccH--HHHhh
Confidence 4556688899999999986221 11122445666655 6789665 32 121 11122
Q ss_pred CCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhc
Q psy17603 252 ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~ 292 (591)
.+..++.+.+ .+++++-+....++.+..+++.++++
T Consensus 111 --~~~~~~~~~~---aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 111 --IDAFYARCEQ---VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred --HHHHHHHHHH---cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 3555565543 35667777777777788888887765
No 147
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=51.64 E-value=1.3e+02 Score=30.58 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=54.0
Q ss_pred CCCCHHHHH---HHHHHHHHHHHHcCCCEEEecc--------c--C-----------CH-HH---HHHHHHHHHhcC--C
Q psy17603 184 EHVSEATMA---EWHRPRIQALVEAGADILAIET--------I--P-----------AS-KE---AQMLCRLLREWP--H 233 (591)
Q Consensus 184 ~~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET--------~--~-----------~~-~E---a~aa~~a~~~~~--~ 233 (591)
..++.+|+. +.|.+-++...++|.|.|-+.- | | ++ .. +..+++++|+.. +
T Consensus 131 ~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d 210 (343)
T 3kru_A 131 RELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPEN 210 (343)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTT
T ss_pred hhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCcc
Confidence 346776665 5566667777889999998872 1 1 11 11 355666777543 4
Q ss_pred CceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEe
Q psy17603 234 QKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 234 ~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGv 274 (591)
.|+.|-++.. ....+|.++++.+..+...... ++.|-+
T Consensus 211 ~pv~vRls~~--~~~~~g~~~~~~~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 211 KPIFVRVSAD--DYMEGGINIDMMVEYINMIKDK-VDLIDV 248 (343)
T ss_dssp SCEEEEEECC--CSSTTSCCHHHHHHHHHHHTTT-CSEEEE
T ss_pred CCeEEEeech--hhhccCccHHHHHHHHHHhhcc-ccEEec
Confidence 5887766553 2334577787777666544445 666665
No 148
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=51.14 E-value=83 Score=30.32 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=21.8
Q ss_pred HHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCC
Q psy17603 196 RPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPH 233 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~ 233 (591)
.+.+++++++|+++|-+ |+.+....+.+.++.+++++
T Consensus 49 ~~~a~al~~gGi~~iEv-t~~t~~a~e~I~~l~~~~~~ 85 (232)
T 4e38_A 49 IPLGKVLAENGLPAAEI-TFRSDAAVEAIRLLRQAQPE 85 (232)
T ss_dssp HHHHHHHHHTTCCEEEE-ETTSTTHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHCCCCEEEE-eCCCCCHHHHHHHHHHhCCC
Confidence 34566899999998865 55544333333333345654
No 149
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=50.86 E-value=2.2e+02 Score=29.48 Aligned_cols=45 Identities=9% Similarity=0.045 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCCEEEecccC-----------CHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 195 HRPRIQALVEAGADILAIETIP-----------ASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~-----------~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
-.+.++.+.++|+|++.+-+|- ..+..+...++.++ .++|++.+.
T Consensus 158 a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-~Gl~~~te~ 213 (385)
T 3nvt_A 158 VAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-YGLGVISEI 213 (385)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH-cCCEEEEec
Confidence 3355667788999999988853 23444555555555 478877655
No 150
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=50.85 E-value=1e+02 Score=29.78 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=14.8
Q ss_pred HHHHHHHHHHcCCCEEEec
Q psy17603 195 HRPRIQALVEAGADILAIE 213 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~E 213 (591)
+.++++.++++|+++|-+=
T Consensus 45 ~~~~~~~al~~Gv~~vqlR 63 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLR 63 (243)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEc
Confidence 4566777889999999773
No 151
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=49.17 E-value=1.3e+02 Score=30.33 Aligned_cols=37 Identities=8% Similarity=0.070 Sum_probs=24.9
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecC
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKD 244 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~ 244 (591)
.+.+.|+|.+.++.-.++.+++.. +.+ .+.+.+.+.+
T Consensus 262 ~l~~~g~d~~~~d~~~d~~~~~~~------~g~-~~~l~Gnldp 298 (353)
T 1j93_A 262 RLPLTGVDVVSLDWTVDMADGRRR------LGP-NVAIQGNVDP 298 (353)
T ss_dssp GGGGGCCSEEECCTTSCHHHHHHH------TCS-SSEEECCBCG
T ss_pred HHHhcCCCEEEeCCCCCHHHHHHH------cCC-CeEEEecCCH
Confidence 345789999999976678775432 333 4556676766
No 152
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=49.09 E-value=26 Score=35.20 Aligned_cols=41 Identities=22% Similarity=0.328 Sum_probs=28.2
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHH-hcCCCceEEEEEe
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLR-EWPHQKAWLSFSC 242 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~-~~~~~pv~vSf~~ 242 (591)
..+++|+|+|.+.||+ +.+.+.+++.++ .+++.|+.+|.-+
T Consensus 212 ~A~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 212 QAAEAGADLVLLDNFK-PEELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeeEEEECCC
Confidence 3346789999998864 677777777666 3566777777633
No 153
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=49.09 E-value=22 Score=35.52 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=31.4
Q ss_pred HHHHHHHcCCCEEEecccCCHHHHHHHHHHHHh-cCCCceEEEEEec
Q psy17603 198 RIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSFSCK 243 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~-~~~~pv~vSf~~~ 243 (591)
+++..+++|+|+|.+.+| +..+.+.+++.++. ++..|+.+|.-+.
T Consensus 205 ea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGIt 250 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGIT 250 (285)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCCC
Confidence 333445689999999997 46777777777764 4456777777443
No 154
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=48.75 E-value=70 Score=31.95 Aligned_cols=97 Identities=10% Similarity=-0.015 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEE-----EecccC--CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHH
Q psy17603 187 SEATMAEWHRPRIQALVEAGADIL-----AIETIP--ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVAR 259 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i-----~~ET~~--~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~ 259 (591)
..+.+.+|.+..++.+-+ -+.++ +||.++ .+.+.+..++.+++ .+.+++.=+-+.+-+.| ....++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~-~g~~VflDlK~~DIpnT-----v~~~a~ 113 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLRE-KDLLSIGDVKRSDIAAS-----AKMYAK 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEECCCHHH-----HHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHH-CCCeEEEEecccCcHHH-----HHHHHH
Confidence 367888888887777643 34443 223322 12334445566666 37899988877764443 445555
Q ss_pred HHHhhCCCCeEEEEecCC-CchhhHHHHHHHHh
Q psy17603 260 TCYNMNPDQLIAVGVNCV-RPLMVSSLIEQLKT 291 (591)
Q Consensus 260 ~~~~~~~~~~~aiGvNC~-~p~~i~~~l~~l~~ 291 (591)
.+... ..+++++-++.. ++..+.++++....
T Consensus 114 ~~~~~-~lg~D~vTvh~~~G~~~l~~~~~~a~~ 145 (290)
T 3r89_A 114 AHFEG-DFETDFITLNPYMGMDSIEPYEEYIEK 145 (290)
T ss_dssp HHHSG-GGCCSEEEECCTTCGGGTGGGHHHHHT
T ss_pred HHhcc-ccCCCEEEEcccCCHHHHHHHHHHHHh
Confidence 54321 246788888884 57777777776544
No 155
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=48.17 E-value=1.7e+02 Score=27.17 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCc
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQK 235 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~p 235 (591)
+.+.++.++++|+++|-+- +.+. +.+..++.+++ +++.
T Consensus 27 ~~~~~~~l~~gGv~~iel~-~k~~-~~~~~i~~~~~-~~~~ 64 (207)
T 2yw3_A 27 LLGLARVLEEEGVGALEIT-LRTE-KGLEALKALRK-SGLL 64 (207)
T ss_dssp HHHHHHHHHHTTCCEEEEE-CSST-HHHHHHHHHTT-SSCE
T ss_pred HHHHHHHHHHcCCCEEEEe-CCCh-HHHHHHHHHhC-CCCE
Confidence 3467778899999998653 3333 33445555665 4443
No 156
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=47.84 E-value=1.2e+02 Score=28.82 Aligned_cols=93 Identities=11% Similarity=0.090 Sum_probs=53.5
Q ss_pred HHHHHHHHcCCCEEEe-----cccCCHHHHHHHHHHHHhc--CCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCe
Q psy17603 197 PRIQALVEAGADILAI-----ETIPASKEAQMLCRLLREW--PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQL 269 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~-----ET~~~~~Ea~aa~~a~~~~--~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~ 269 (591)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+. +++|+-+-+-+.+.. +.++.+.+ .++
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~---------~~i~~~~~---aGa 88 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPE---------QWVKPMAV---AGA 88 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGG---------GGHHHHHH---HTC
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHH---------HHHHHHHH---cCC
Confidence 4556777899998887 4446665545566777755 677877766654322 22233322 244
Q ss_pred EEEEecCCCchhhHHHHHHHHhcCCceEEecC
Q psy17603 270 IAVGVNCVRPLMVSSLIEQLKTENIPLVVYPN 301 (591)
Q Consensus 270 ~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~ 301 (591)
+.|-|=+-...++...++.+++....++..++
T Consensus 89 d~itvH~Ea~~~~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 89 NQYTFHLEATENPGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp SEEEEEGGGCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEccCCchhHHHHHHHHHHcCCCEEEEEc
Confidence 55555443334567777777765444444443
No 157
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=47.83 E-value=45 Score=33.88 Aligned_cols=60 Identities=12% Similarity=0.141 Sum_probs=35.4
Q ss_pred HHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEec
Q psy17603 199 IQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvN 275 (591)
++..+++|+|+|.+.+|+ +.+.+.+++.++ +..++.+|. |-+++.+.+.. ..+++.|++-
T Consensus 244 a~eAl~aGaD~I~LDn~~-~~~l~~av~~l~--~~v~ieaSG----------GIt~~~I~~~a----~tGVD~isvG 303 (320)
T 3paj_A 244 LEEAISAGADIIMLDNFS-LEMMREAVKINA--GRAALENSG----------NITLDNLKECA----ETGVDYISVG 303 (320)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHT--TSSEEEEES----------SCCHHHHHHHH----TTTCSEEECT
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC--CCCeEEEEC----------CCCHHHHHHHH----HcCCCEEEEC
Confidence 334456788998888874 666777766654 234444444 45555544433 2456666654
No 158
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=47.40 E-value=2.4e+02 Score=28.48 Aligned_cols=171 Identities=11% Similarity=0.110 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccC-C-----------------HHHHHHHHHHHHhcCCCceEEEEEe-c----
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIP-A-----------------SKEAQMLCRLLREWPHQKAWLSFSC-K---- 243 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~-~-----------------~~Ea~aa~~a~~~~~~~pv~vSf~~-~---- 243 (591)
.-+.+.++|.+++ +.|+=+|++|-.. + +...+.+.+++++. +.++++.+.= +
T Consensus 37 ~~~~~~~~y~~rA----~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~-G~~i~~QL~H~Gr~~~ 111 (340)
T 3gr7_A 37 VRTWHKIHYPARA----VGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEH-GAAIGIQLAHAGRKSQ 111 (340)
T ss_dssp CCHHHHHHHHHHH----HTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHT-TCEEEEEEECCGGGCC
T ss_pred CCHHHHHHHHHHh----cCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhC-CCeEEEEeccCCCccC
Confidence 4467888898765 4789999988432 1 12346677777764 5666666531 0
Q ss_pred -------CCC----------cccCCCCHHHHHHHHH----hhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCC
Q psy17603 244 -------DDK----------HISNGESFTQVARTCY----NMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNS 302 (591)
Q Consensus 244 -------~~g----------~l~~G~~~~~~~~~~~----~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~a 302 (591)
+.. +-++-+.+.++++.+. .....+.++|=|||.+-..+.+.+....+.+. -+.
T Consensus 112 ~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~-----D~y 186 (340)
T 3gr7_A 112 VPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQ-----DEY 186 (340)
T ss_dssp SSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCC-----STT
T ss_pred CCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCC-----Ccc
Confidence 000 0111112333333221 11235789999999887777666655432210 011
Q ss_pred CCccceeecccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhc
Q psy17603 303 GEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE 382 (591)
Q Consensus 303 G~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 382 (591)
|-+ +|. ...=+...++++|+.- +.||.+-.+... |. .+ +.+.+++.++++.+.+.
T Consensus 187 GGs---len--R~r~~~eiv~avr~~v-------------~~pv~vRls~~~-~~--~~----g~~~~~~~~la~~L~~~ 241 (340)
T 3gr7_A 187 GGS---PEN--RYRFLGEVIDAVREVW-------------DGPLFVRISASD-YH--PD----GLTAKDYVPYAKRMKEQ 241 (340)
T ss_dssp SSS---HHH--HHHHHHHHHHHHHHHC-------------CSCEEEEEESCC-CS--TT----SCCGGGHHHHHHHHHHT
T ss_pred cCC---HHH--HHHHHHHHHHHHHHhc-------------CCceEEEecccc-cc--CC----CCCHHHHHHHHHHHHHc
Confidence 211 111 1111334445555432 356555333221 11 11 23446677788888899
Q ss_pred CCcEEeecCC
Q psy17603 383 GVALVGGCCR 392 (591)
Q Consensus 383 Gv~~VGgcCg 392 (591)
|+++|=+-.+
T Consensus 242 Gvd~i~vs~g 251 (340)
T 3gr7_A 242 GVDLVDVSSG 251 (340)
T ss_dssp TCCEEEEECC
T ss_pred CCCEEEEecC
Confidence 9998866543
No 159
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=46.94 E-value=1e+02 Score=30.73 Aligned_cols=67 Identities=12% Similarity=0.265 Sum_probs=39.7
Q ss_pred ecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHH
Q psy17603 242 CKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQML 321 (591)
Q Consensus 242 ~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a 321 (591)
++++....-| ++.++++.+....+.. -|.|.|-..+.+.++++ +|+|++.+.+|+. ++++.+
T Consensus 174 ikdNHi~~~G-~i~~Av~~ar~~~~~~--~IeVEv~tl~ea~eAl~--------------aGaD~I~LDn~~~-~~l~~a 235 (287)
T 3tqv_A 174 IKENHIRSAG-GIAKAVTKAKKLDSNK--VVEVEVTNLDELNQAIA--------------AKADIVMLDNFSG-EDIDIA 235 (287)
T ss_dssp ECTTTC-----CHHHHHHHHHHHCTTS--CEEEEESSHHHHHHHHH--------------TTCSEEEEESCCH-HHHHHH
T ss_pred EeHHHHHHhC-CHHHHHHHHHhhCCCC--cEEEEeCCHHHHHHHHH--------------cCCCEEEEcCCCH-HHHHHH
Confidence 3443323334 4888888876543222 35666655544433322 5899999999764 778888
Q ss_pred HHHHh
Q psy17603 322 CRLLR 326 (591)
Q Consensus 322 ~~~~~ 326 (591)
++.++
T Consensus 236 v~~~~ 240 (287)
T 3tqv_A 236 VSIAR 240 (287)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 87765
No 160
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=46.68 E-value=2.1e+02 Score=29.06 Aligned_cols=146 Identities=8% Similarity=0.043 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHHhhhcccCccccccccccCCCCchhhhhhhCCcchhhcchhhhh
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIK 447 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~l~~~~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~~h~~~i~ 447 (591)
+++.+.+.++++.+.|.+.|=..+|..++...++++.+++..+ ++.++ .++.|..|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g----------~d~~l------------~vDan~~~-- 200 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLE----------PGEKA------------MADANQGW-- 200 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGGSC----------TTCEE------------EEECTTCS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHhcC----------CCCEE------------EEECCCCC--
Q ss_pred CCCCcccccccCCCCcccccCCcchhHHHHHHHHHcCCcEEEeecCCcHHHHHHHHhccccc--CCCCCCCCCcHHHHHH
Q psy17603 448 GSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW--DDKHISNGESFTQVAR 525 (591)
Q Consensus 448 aG~~v~~~~~y~~~~~~l~~~~~e~~a~~~~~~~~~G~~~vgGCcgttp~~i~~l~~~~~~~--d~~~l~dG~~l~~~~~ 525 (591)
+.++..+.++.+-+.|+ +|=.-++ ..+..+.+++.++.- -++.+.+-..++++++
T Consensus 201 ---------------------~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~ 257 (379)
T 2rdx_A 201 ---------------------RVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVA 257 (379)
T ss_dssp ---------------------CHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHH
T ss_pred ---------------------CHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHH
Q ss_pred HhhhcCCCCeeEEEEcCC-ChhhHHHHHHHhhhcCCcEEE
Q psy17603 526 TCYNMNPDQLIAVGVNCV-RPLMVSPLIEQLKTENIPLVV 564 (591)
Q Consensus 526 ~~~~~~~~~~~avGiNC~-~p~~v~~~i~~l~~~~~pl~v 564 (591)
. ..-.++.+-++-+ ++....++.+..+..+.++++
T Consensus 258 ~----~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 293 (379)
T 2rdx_A 258 D----RGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVA 293 (379)
T ss_dssp H----TCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred c----CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEE
No 161
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=46.45 E-value=2.1e+02 Score=27.68 Aligned_cols=82 Identities=16% Similarity=0.054 Sum_probs=48.7
Q ss_pred eeecccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcC-CcE
Q psy17603 308 AIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEG-VAL 386 (591)
Q Consensus 308 ~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~G-v~~ 386 (591)
+++.+.+.+++...+..+|+.. .++|+++....- ..+|++. .+.+......+.+...| +++
T Consensus 55 ~l~~~~~~~~v~~~l~~lr~~~------------~~lPiI~T~Rt~----~EGG~~~--~~~~~~~~ll~~~~~~~~~d~ 116 (258)
T 4h3d_A 55 FFENVENIKEVKEVLYELRSYI------------HDIPLLFTFRSV----VEGGEKL--ISRDYYTTLNKEISNTGLVDL 116 (258)
T ss_dssp GCTTTTCHHHHHHHHHHHHHHC------------TTSCEEEECCCG----GGTCSCC--CCHHHHHHHHHHHHHTTCCSE
T ss_pred cccccCCHHHHHHHHHHHHHhc------------CCCCEEEEEech----hhCCCCC--CCHHHHHHHHHHHHhcCCchh
Confidence 3455667777777777776542 247877633211 1244332 23455666666677776 888
Q ss_pred EeecCCCCHHHHHHHHHHhhh
Q psy17603 387 VGGCCRTYAEDTLHMKHRLDD 407 (591)
Q Consensus 387 VGgcCgtgP~~i~~l~~~l~~ 407 (591)
|=.==....+.+..+++..+.
T Consensus 117 iDvEl~~~~~~~~~l~~~a~~ 137 (258)
T 4h3d_A 117 IDVELFMGDEVIDEVVNFAHK 137 (258)
T ss_dssp EEEEGGGCHHHHHHHHHHHHH
T ss_pred hHHhhhccHHHHHHHHHHHHh
Confidence 877666666677777765543
No 162
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=46.35 E-value=31 Score=34.48 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=27.3
Q ss_pred HHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 198 RIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
+++..+++|+|+|.+.+|+ ..+.+.+++.++ +..++.+|.
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~--~~v~ieaSG 249 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIAR--GKVALEVSG 249 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHT--TTCEEEEES
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhc--CCceEEEEC
Confidence 4444567899999999976 567777777665 234555555
No 163
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=46.28 E-value=1e+02 Score=33.15 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=34.9
Q ss_pred HHHHHHcCCCEEEec----c-----------cCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHh
Q psy17603 199 IQALVEAGADILAIE----T-----------IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN 263 (591)
Q Consensus 199 i~~l~~aGvD~i~~E----T-----------~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~ 263 (591)
++.+.++|+|.|.+- + .|.+.....+.++++++ +.|++.++=+ . +..++++.+.
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~GGI------~---~~~di~kala- 379 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH-GIPVIADGGI------K---YSGDMVKALA- 379 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEESCC------C---SHHHHHHHHH-
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC-CCcEEEeCCC------C---CHHHHHHHHH-
Confidence 456778999999751 1 23333333444455543 6898876622 1 3456666552
Q ss_pred hCCCCeEEEEe
Q psy17603 264 MNPDQLIAVGV 274 (591)
Q Consensus 264 ~~~~~~~aiGv 274 (591)
.+++++.+
T Consensus 380 ---~GA~~V~v 387 (511)
T 3usb_A 380 ---AGAHVVML 387 (511)
T ss_dssp ---TTCSEEEE
T ss_pred ---hCchhhee
Confidence 34555555
No 164
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=46.22 E-value=57 Score=32.76 Aligned_cols=57 Identities=9% Similarity=0.163 Sum_probs=37.5
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHh
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR 326 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~ 326 (591)
++.++++.+....+. .-|-|-|-..+.+.++++ +|+|++.+.+|+. ++++.++..++
T Consensus 193 ~i~~Av~~ar~~~p~--~kIeVEv~tl~e~~eAl~--------------aGaDiImLDn~s~-~~l~~av~~~~ 249 (300)
T 3l0g_A 193 SITLAIQRLRKNLKN--EYIAIECDNISQVEESLS--------------NNVDMILLDNMSI-SEIKKAVDIVN 249 (300)
T ss_dssp CHHHHHHHHHHHSSS--CCEEEEESSHHHHHHHHH--------------TTCSEEEEESCCH-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCC--CCEEEEECCHHHHHHHHH--------------cCCCEEEECCCCH-HHHHHHHHhhc
Confidence 377888877654332 235566655444433322 6899999999865 88888887765
No 165
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=46.15 E-value=1.3e+02 Score=27.62 Aligned_cols=95 Identities=13% Similarity=0.016 Sum_probs=52.5
Q ss_pred HHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC-
Q psy17603 199 IQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV- 277 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~- 277 (591)
++.+.++|+|.+++=..+.......+++.++++ +.++.+.+. . -++..+.++.+.+ .+++.|++|-.
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~v~~~-~-------~~t~~~~~~~~~~---~g~d~i~v~~g~ 137 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVVVDMI-C-------VDDLPARVRLLEE---AGADMLAVHTGT 137 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEEECT-T-------CSSHHHHHHHHHH---HTCCEEEEECCH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEEEEec-C-------CCCHHHHHHHHHH---cCCCEEEEcCCC
Confidence 566788999999998777655567778888875 667665431 1 1233344444433 23455666521
Q ss_pred ----CchhhHHHHHHHHhcCCceEEecCCCCc
Q psy17603 278 ----RPLMVSSLIEQLKTENIPLVVYPNSGEH 305 (591)
Q Consensus 278 ----~p~~i~~~l~~l~~~~~~i~~l~~aG~D 305 (591)
.+......++.+++....+-..+.+|+.
T Consensus 138 ~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~ 169 (211)
T 3f4w_A 138 DQQAAGRKPIDDLITMLKVRRKARIAVAGGIS 169 (211)
T ss_dssp HHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC
T ss_pred cccccCCCCHHHHHHHHHHcCCCcEEEECCCC
Confidence 0001234455555432234455666653
No 166
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=45.16 E-value=19 Score=35.75 Aligned_cols=45 Identities=27% Similarity=0.299 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
+.+.. +.-.+++++|.++|+|.|++|-+|+. +++.+.+.+ ..|++
T Consensus 168 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l----~iP~i 212 (275)
T 3vav_A 168 TEAGA-AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL----SIPTI 212 (275)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC----SSCEE
T ss_pred CHHHH-HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC----CCCEE
Confidence 34444 55557889999999999999999985 666665543 46765
No 167
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=45.15 E-value=93 Score=31.51 Aligned_cols=57 Identities=14% Similarity=0.254 Sum_probs=35.5
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHh
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLR 326 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~ 326 (591)
++.++++.+....+.. -|.+-|-..+.+..+ + ++|+|.+.+.+| ++.+++.+++.++
T Consensus 217 ~i~~Av~~ar~~~p~~--kIeVEVdtldea~eA---l-----------~aGaD~I~LDn~-~~~~l~~av~~l~ 273 (320)
T 3paj_A 217 GIRQAISTAKQLNPGK--PVEVETETLAELEEA---I-----------SAGADIIMLDNF-SLEMMREAVKINA 273 (320)
T ss_dssp SHHHHHHHHHHHSTTS--CEEEEESSHHHHHHH---H-----------HTTCSEEEEESC-CHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCC--eEEEEECCHHHHHHH---H-----------HcCCCEEEECCC-CHHHHHHHHHHhC
Confidence 4777877776543332 345555444333322 2 258999999997 5678888887664
No 168
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=45.09 E-value=3e+02 Score=28.97 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=44.7
Q ss_pred CcHHHHHHHHhccccc-------CCCCCCCCCcHHHHHHHhhhcCCCCeeEEEEcCCC--------hhhHHHHHHHhhh-
Q psy17603 494 TYAEDTLHMKHRLDDW-------DDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVR--------PLMVSPLIEQLKT- 557 (591)
Q Consensus 494 ttp~~i~~l~~~~~~~-------d~~~l~dG~~l~~~~~~~~~~~~~~~~avGiNC~~--------p~~v~~~i~~l~~- 557 (591)
.+++..++|++.+..+ |-+--.+-+-+.++++.+. +++++++|.+|.+. .+....+++.+.+
T Consensus 323 l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~~~~~~~al~~~l--~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~ 400 (457)
T 2csu_A 323 LEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLL--QDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEV 400 (457)
T ss_dssp CCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHH--HSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCccccccCCCeeCCCCCCHHHHHHHHHHHh--cCCCCCEEEEEccccccccCCchhHHHHHHHHHHHh
Confidence 4566777888877643 2222234455667777765 46788999888732 1223444444444
Q ss_pred -cCCcEEEecCCCC
Q psy17603 558 -ENIPLVVYPNSGE 570 (591)
Q Consensus 558 -~~~pl~vYPNsG~ 570 (591)
.++|+++.--.|.
T Consensus 401 ~~~kPvvv~~~~g~ 414 (457)
T 2csu_A 401 NNEKPVLAMFMAGY 414 (457)
T ss_dssp CCCCCEEEEEECTT
T ss_pred cCCCCEEEEeCCCc
Confidence 5789887444454
No 169
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=44.61 E-value=2.4e+02 Score=27.78 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec-ccC--CHHHHHHHHHHHHhc-CCCceEEEEEecCCCcccCCCCHHHHHHHH
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE-TIP--ASKEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQVARTC 261 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E-T~~--~~~Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~ 261 (591)
.+++.+.++.+ .+.+.|+|.|.+- |.+ ...+....++.+++. ++.| +.+-+.++ .|..+..+...+
T Consensus 156 ~~~~~~~~~~~----~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--l~~H~Hn~----~Gla~An~laAv 225 (302)
T 2ftp_A 156 VDPRQVAWVAR----ELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRER--LAGHFHDT----YGQALANIYASL 225 (302)
T ss_dssp CCHHHHHHHHH----HHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGG--EEEEEBCT----TSCHHHHHHHHH
T ss_pred CCHHHHHHHHH----HHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEeCCC----ccHHHHHHHHHH
Confidence 46666665554 6778999998665 444 346667777777753 3344 56655543 466677777666
Q ss_pred H
Q psy17603 262 Y 262 (591)
Q Consensus 262 ~ 262 (591)
.
T Consensus 226 ~ 226 (302)
T 2ftp_A 226 L 226 (302)
T ss_dssp H
T ss_pred H
Confidence 3
No 170
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=44.40 E-value=27 Score=35.15 Aligned_cols=31 Identities=6% Similarity=0.310 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCEEEecccCCHHHHHHHHHHHH
Q psy17603 198 RIQALVEAGADILAIETIPASKEAQMLCRLLR 229 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~ 229 (591)
+++..+++|+|+|.+.+|+ ..+.+.+++.++
T Consensus 219 e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~ 249 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMS-ISEIKKAVDIVN 249 (300)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHhhc
Confidence 4444567899999999985 577777777665
No 171
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=43.23 E-value=28 Score=33.47 Aligned_cols=63 Identities=19% Similarity=0.209 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCEEEecccC--CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEe
Q psy17603 197 PRIQALVEAGADILAIETIP--ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~--~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGv 274 (591)
++++.+.++|+|++++-+-- +..+.+..++.+++. +.++++.. .+++++.+.. ..+++.||+
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v-----------~t~eea~~a~----~~Gad~Ig~ 155 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-GLLAMADC-----------STVNEGISCH----QKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEEC-----------SSHHHHHHHH----HTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-CCEEEEec-----------CCHHHHHHHH----hCCCCEEEe
Confidence 56667788999999876532 223455566666663 66666543 2455554443 257788887
Q ss_pred c
Q psy17603 275 N 275 (591)
Q Consensus 275 N 275 (591)
|
T Consensus 156 ~ 156 (229)
T 3q58_A 156 T 156 (229)
T ss_dssp T
T ss_pred c
Confidence 5
No 172
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.66 E-value=30 Score=34.54 Aligned_cols=43 Identities=9% Similarity=0.078 Sum_probs=30.0
Q ss_pred HHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHh-cCCCceEEEE
Q psy17603 197 PRIQALVEAGADILAIETIPASKEAQMLCRLLRE-WPHQKAWLSF 240 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~-~~~~pv~vSf 240 (591)
++++..+++|+|+|.+.+|+ ..+.+.+++.++. ++..++.+|.
T Consensus 205 eea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~~~~~v~ieaSG 248 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFA-VWQTQTAVQRRDSRAPTVMLESSG 248 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEES
T ss_pred HHHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeEEEEEC
Confidence 34555567899999999974 5677777777774 3455666665
No 173
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=42.64 E-value=2.2e+02 Score=28.26 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=49.2
Q ss_pred HHHHHHcCC-CEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCC
Q psy17603 199 IQALVEAGA-DILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCV 277 (591)
Q Consensus 199 i~~l~~aGv-D~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~ 277 (591)
+.+..++|. .++..+++++.++++..++.+++..+.|+-+.+.+.+. + ....+.+.++.+.+ .++++|-++..
T Consensus 32 a~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~---~g~d~V~~~~g 105 (328)
T 2gjl_A 32 AAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPT--Q-KPVPYAEYRAAIIE---AGIRVVETAGN 105 (328)
T ss_dssp HHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCC--S-SCCCHHHHHHHHHH---TTCCEEEEEES
T ss_pred HHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccc--c-cCccHHHHHHHHHh---cCCCEEEEcCC
Confidence 345556665 56656677778887777777776667888888877531 0 12345666766644 23444444443
Q ss_pred CchhhHHHHHHHHh
Q psy17603 278 RPLMVSSLIEQLKT 291 (591)
Q Consensus 278 ~p~~i~~~l~~l~~ 291 (591)
.|. ..++.+++
T Consensus 106 ~p~---~~~~~l~~ 116 (328)
T 2gjl_A 106 DPG---EHIAEFRR 116 (328)
T ss_dssp CCH---HHHHHHHH
T ss_pred CcH---HHHHHHHH
Confidence 353 34455544
No 174
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=42.62 E-value=1.9e+02 Score=30.73 Aligned_cols=160 Identities=7% Similarity=-0.033 Sum_probs=89.3
Q ss_pred HHhcCCcEEeecCCCCH-HHHHHHHHHhhhcccCccccccccccCCCCchhhhhhhCCcchhhcchhhhhCCCCcccccc
Q psy17603 379 WLDEGVALVGGCCRTYA-EDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDFIKGSQTNDFLRD 457 (591)
Q Consensus 379 ~~~~Gv~~VGgcCgtgP-~~i~~l~~~l~~~~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~~h~~~i~aG~~v~~~~~ 457 (591)
...+|+++|=+.|..-+ +.+.++.+.....- ... +.|.+- .-+ +. .-+.+|+++++.|.
T Consensus 126 a~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lg--m~~----LvEvh~---------~eE-~~----~A~~lga~iIGinn 185 (452)
T 1pii_A 126 ARYYQADACLLMLSVLDDDQYRQLAAVAHSLE--MGV----LTEVSN---------EEE-QE----RAIALGAKVVGINN 185 (452)
T ss_dssp HHHTTCSEEEEETTTCCHHHHHHHHHHHHHTT--CEE----EEEECS---------HHH-HH----HHHHTTCSEEEEES
T ss_pred HHHcCCCEEEEEcccCCHHHHHHHHHHHHHcC--CeE----EEEeCC---------HHH-HH----HHHHCCCCEEEEeC
Confidence 45899999999998644 57777777665531 110 011110 001 10 11367888887765
Q ss_pred cCCCCcccccCCcchhHHHHHHHHHcCCcEEEeecCCcHHHHHHHHhccccc---------------------CCCCCCC
Q psy17603 458 YNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDW---------------------DDKHISN 516 (591)
Q Consensus 458 y~~~~~~l~~~~~e~~a~~~~~~~~~G~~~vgGCcgttp~~i~~l~~~~~~~---------------------d~~~l~d 516 (591)
...... +...+. ...+.+.+..++.+|.++-=.||++++.+++.++.+ ..-+++-
T Consensus 186 r~L~t~---~~dl~~-~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~a~avLVGealmr~~d~~~~~~~l~~~~~KICG 261 (452)
T 1pii_A 186 RDLRDL---SIDLNR-TRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCG 261 (452)
T ss_dssp EETTTT---EECTHH-HHHHHHHHCTTSEEEEESCCCCHHHHHHHTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEECC
T ss_pred CCCCCC---CCCHHH-HHHHHHhCCCCCeEEEECCCCCHHHHHHHHHhCCEEEEcHHHcCCcCHHHHHHHHHHHhccccC
Confidence 442210 001122 223333344578888887778899999887764433 1234555
Q ss_pred CCcHHHHHHHhhhcCCCCeeEEEEcC--CChhhH-----HHHHHHhhhcCCcEEEecCC
Q psy17603 517 GESFTQVARTCYNMNPDQLIAVGVNC--VRPLMV-----SPLIEQLKTENIPLVVYPNS 568 (591)
Q Consensus 517 G~~l~~~~~~~~~~~~~~~~avGiNC--~~p~~v-----~~~i~~l~~~~~pl~vYPNs 568 (591)
=+..+++...+. ..++++|+.+ -+|.+| ..+++.. .-..++|+-|.
T Consensus 262 it~~eda~~a~~----~Gad~iGfIf~~~SpR~V~~~~a~~i~~~~--~v~~VgVFvn~ 314 (452)
T 1pii_A 262 LTRGQDAKAAYD----AGAIYGGLIFVATSPRCVNVEQAQEVMAAA--PLQYVGVFRNH 314 (452)
T ss_dssp CCSHHHHHHHHH----HTCSEEEEECCTTCTTBCCHHHHHHHHHHC--CCEEEEEESSC
T ss_pred CCcHHHHHHHHh----cCCCEEEeecCCCCCCCCCHHHHHHHHhcC--CCCEEEEEeCC
Confidence 567776665543 2579999997 355554 3333331 12456777775
No 175
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=42.57 E-value=57 Score=32.18 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=40.8
Q ss_pred HHHHHHHcCCCEEEe--cccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEec
Q psy17603 198 RIQALVEAGADILAI--ETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~--ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvN 275 (591)
|++...+.|+|.+++ .+++ ..+++..++.++++ ++.+|+.. .+.+++...+ . .+++.||+|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~l-Gl~~lvev-----------~t~ee~~~A~-~---~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESL-GMTALVEV-----------HTEQEADRAL-K---AGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHT-TCEEEEEE-----------SSHHHHHHHH-H---HTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHC-CCcEEEEc-----------CCHHHHHHHH-H---CCCCEEEEC
Confidence 455566799999987 4554 55677777777774 78888765 2445554433 2 367889998
No 176
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=42.16 E-value=1.1e+02 Score=29.11 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=0.0
Q ss_pred hccCHHHHHHHHHHHHHHhcceeeccccccChhchhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCccccc
Q psy17603 34 LATAKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVDYVKEAIALEATHARIRSDDPARDIL 113 (591)
Q Consensus 34 l~~~Pe~v~~vH~~yl~AGAdiI~TnTy~as~~~l~~~~g~~~~~~~~l~~~av~lA~~a~~~~~~~~~~~~~~~~~~~~ 113 (591)
+.+-|+.+...-+.|+++|||+|+...|... +.++.+++.+++.-..
T Consensus 73 l~DipnTv~~~~~~~~~~gad~vtvh~~~G~----------------~~l~~~~~~~~~~g~~----------------- 119 (228)
T 3m47_A 73 VADIPETNEKICRATFKAGADAIIVHGFPGA----------------DSVRACLNVAEEMGRE----------------- 119 (228)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESTTCH----------------HHHHHHHHHHHHHTCE-----------------
T ss_pred ecccHhHHHHHHHHHHhCCCCEEEEeccCCH----------------HHHHHHHHHHHhcCCC-----------------
Q ss_pred cccccCCCCCccCCCCcccCccchhhhhhhHhhhhccccCCCCcceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHH
Q psy17603 114 IAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAE 193 (591)
Q Consensus 114 va~~~gp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~ 193 (591)
++|..++.+-+. .+.+.+
T Consensus 120 ---------------------------------------------v~vLt~~s~~~~-----------------~~~~~~ 137 (228)
T 3m47_A 120 ---------------------------------------------VFLLTEMSHPGA-----------------EMFIQG 137 (228)
T ss_dssp ---------------------------------------------EEEECCCCSGGG-----------------GTTHHH
T ss_pred ---------------------------------------------eEEEEeCCCccH-----------------HHHHHH
Q ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHH
Q psy17603 194 WHRPRIQALVEAGADILAIETIPASKEAQMLCRLL 228 (591)
Q Consensus 194 ~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~ 228 (591)
.....++...+.|+|.++.-. ....|++.+.+..
T Consensus 138 ~~~~~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~ 171 (228)
T 3m47_A 138 AADEIARMGVDLGVKNYVGPS-TRPERLSRLREII 171 (228)
T ss_dssp HHHHHHHHHHHTTCCEEECCS-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhc
No 177
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=41.94 E-value=67 Score=30.90 Aligned_cols=38 Identities=16% Similarity=0.132 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCcEEeecCCC-----CHHHHHHHHHHhhhcc
Q psy17603 372 VDKYVTDWLDEGVALVGGCCRT-----YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 372 ~~~~~~~~~~~Gv~~VGgcCgt-----gP~~i~~l~~~l~~~~ 409 (591)
+.+.++.+.+.|+++|..+|-+ |++.-+.+.+.|+...
T Consensus 55 l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~ 97 (240)
T 3ixl_A 55 VVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREAT 97 (240)
T ss_dssp HHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhcc
Confidence 3445667778899999999954 3343356666666643
No 178
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=41.89 E-value=59 Score=31.97 Aligned_cols=48 Identities=19% Similarity=0.141 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHHHHH-HHHHHHhcCCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQM-LCRLLREWPHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~a-a~~a~~~~~~~pv~ 237 (591)
.+.+++.++-.+-++.|.+.|+|+|++=... +-+ +++.+|+..+.|++
T Consensus 47 ks~~~i~~~~~~~~~~L~~~g~~~IVIACNT----a~~~al~~lr~~~~iPvi 95 (269)
T 3ist_A 47 RDKEEVAKFTWEMTNFLVDRGIKMLVIACNT----ATAAALYDIREKLDIPVI 95 (269)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHH----HHHHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC----ccHHHHHHHHHhcCCCEE
Confidence 5899999999999999999999998874321 222 35667754567865
No 179
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=41.80 E-value=74 Score=32.60 Aligned_cols=89 Identities=9% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCCHHHHH---HHHHHHHHHHHHcCCCEEEeccc----------C-----------CHH-H---HHHHHHHHHhcC--CC
Q psy17603 185 HVSEATMA---EWHRPRIQALVEAGADILAIETI----------P-----------ASK-E---AQMLCRLLREWP--HQ 234 (591)
Q Consensus 185 ~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET~----------~-----------~~~-E---a~aa~~a~~~~~--~~ 234 (591)
.++.+|+. +.|.+-++...++|.|.|-+.-- | +++ . +..+++++|+.- +.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 46776665 55666677778899999877632 1 111 1 345666666532 46
Q ss_pred ceEEEEEecCCCcccCC-CCHHHHHHHHHhhCCCCeEEEEec
Q psy17603 235 KAWLSFSCKDDKHISNG-ESFTQVARTCYNMNPDQLIAVGVN 275 (591)
Q Consensus 235 pv~vSf~~~~~g~l~~G-~~~~~~~~~~~~~~~~~~~aiGvN 275 (591)
|+.|-++..+- ...| .++++.+..+......+++.|-+-
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 88887776431 2224 445555544433333456665554
No 180
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=40.76 E-value=32 Score=33.04 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCCEEEecccC--CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEe
Q psy17603 197 PRIQALVEAGADILAIETIP--ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~--~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGv 274 (591)
++++.+.++|+|++++-+-- +..+.+..++.+++. +.++++.. .+++++.+.. ..+++.||+
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v-----------~t~eea~~a~----~~Gad~Ig~ 155 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-HLLTMADC-----------SSVDDGLACQ----RLGADIIGT 155 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEEC-----------CSHHHHHHHH----HTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-CCEEEEeC-----------CCHHHHHHHH----hCCCCEEEE
Confidence 45666788999999887642 223455566666663 66666543 2455554433 256788887
Q ss_pred cC
Q psy17603 275 NC 276 (591)
Q Consensus 275 NC 276 (591)
|-
T Consensus 156 ~~ 157 (232)
T 3igs_A 156 TM 157 (232)
T ss_dssp TT
T ss_pred cC
Confidence 53
No 181
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=40.37 E-value=68 Score=30.93 Aligned_cols=26 Identities=27% Similarity=0.376 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHhcceeeccc-cc
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMTNS-YQ 62 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~TnT-y~ 62 (591)
.+|.+.++-+-=.+||||.|.|.| |.
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 678888888888899999999999 75
No 182
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=40.22 E-value=1.5e+02 Score=29.54 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEeccc-C---------CHHHHHHHHHHHHhcC---------CCceEEEE
Q psy17603 190 TMAEWHRPRIQALVEAGADILAIETI-P---------ASKEAQMLCRLLREWP---------HQKAWLSF 240 (591)
Q Consensus 190 ~l~~~h~~~i~~l~~aGvD~i~~ET~-~---------~~~Ea~aa~~a~~~~~---------~~pv~vSf 240 (591)
+..+.|.+.++.+. .|+|.|.++-- | +......+++++|+.. +.|++|-+
T Consensus 150 ~~~~~~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi 218 (336)
T 1f76_A 150 QGKDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI 218 (336)
T ss_dssp GTHHHHHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred ccHHHHHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEe
Confidence 34455555555554 48999877631 1 2233445566665432 67888765
No 183
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=40.20 E-value=2.8e+02 Score=27.27 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=30.9
Q ss_pred ceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEecc
Q psy17603 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIET 214 (591)
Q Consensus 158 ~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET 214 (591)
+++|.|=+=-+..++.||..| .+.+.+.+ +++.++++|+|+|=+..
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGg 50 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAVK----HGLAMAAAGAGIVDVGG 50 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHHH----HHHHHHHTTCSEEEEEC
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHHH----HHHHHHHCCCCEEEECC
Confidence 467787776666777776443 34555544 45567889999987664
No 184
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=39.64 E-value=1.3e+02 Score=30.92 Aligned_cols=44 Identities=11% Similarity=-0.038 Sum_probs=25.3
Q ss_pred CCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCchh
Q psy17603 233 HQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLM 281 (591)
Q Consensus 233 ~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~ 281 (591)
+.|+.|++.- +..+ ..++++.++.+.... ...++|-+||+.|..
T Consensus 146 ~~pv~vnigg--n~~t--~~~~~dy~~~~~~~~-~~ad~ielNisCPn~ 189 (367)
T 3zwt_A 146 GLPLGVNLGK--NKTS--VDAAEDYAEGVRVLG-PLADYLVVNVSSPNT 189 (367)
T ss_dssp TCCEEEEECC--CTTC--SCHHHHHHHHHHHHG-GGCSEEEEECCCTTS
T ss_pred CceEEEEEec--CCCC--CcCHHHHHHHHHHHh-hhCCEEEEECCCCCC
Confidence 5788888822 1111 344555554433222 356889999988754
No 185
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.59 E-value=25 Score=28.11 Aligned_cols=31 Identities=26% Similarity=0.459 Sum_probs=25.3
Q ss_pred CChhhHHHHHHHhhhcCCcEEEecCCCCcCC
Q psy17603 543 VRPLMVSPLIEQLKTENIPLVVYPNSGERYD 573 (591)
Q Consensus 543 ~~p~~v~~~i~~l~~~~~pl~vYPNsG~~yd 573 (591)
++..++..+|+.++...+||+|+-|+-..-|
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqnd 65 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQND 65 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCccccc
Confidence 6678899999999888899999999755433
No 186
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=39.27 E-value=1.3e+02 Score=33.29 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCCHHHHH---HHHHHHHHHHHHcCCCEEEeccc----------C-----------CH-HH---HHHHHHHHHhc--CCC
Q psy17603 185 HVSEATMA---EWHRPRIQALVEAGADILAIETI----------P-----------AS-KE---AQMLCRLLREW--PHQ 234 (591)
Q Consensus 185 ~~~~e~l~---~~h~~~i~~l~~aGvD~i~~ET~----------~-----------~~-~E---a~aa~~a~~~~--~~~ 234 (591)
.++.+|+. +.|.+-++...++|.|.|-+.-- | ++ .. +..+++++|+. ++.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 46776665 56666777778899999977421 1 11 12 34555666643 356
Q ss_pred ceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEe
Q psy17603 235 KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGV 274 (591)
Q Consensus 235 pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGv 274 (591)
|+++-++..+. ...|.+++++++.+......+++.|.+
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence 88777766432 235777776655443333345555544
No 187
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=39.00 E-value=2.6e+02 Score=27.43 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcC-CCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEE
Q psy17603 195 HRPRIQALVEAG-ADILAIETIPASKEAQMLCRLLREWPHQKAWLSFS 241 (591)
Q Consensus 195 h~~~i~~l~~aG-vD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~ 241 (591)
|.+.++..++.| +|+|=+|-...-...+.+++.+++ .+.++++|.-
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~-~~~kvI~S~H 167 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ-HNVAVIMSNH 167 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh-CCCEEEEEee
Confidence 444444666778 999999987665555666666655 4789999984
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=38.69 E-value=2.5e+02 Score=30.93 Aligned_cols=92 Identities=12% Similarity=0.129 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecccCC------------------HHHHHHHHHHHHhcCCCceEEEEEecCCCcc-
Q psy17603 188 EATMAEWHRPRIQALVEAGADILAIETIPA------------------SKEAQMLCRLLREWPHQKAWLSFSCKDDKHI- 248 (591)
Q Consensus 188 ~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~------------------~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l- 248 (591)
.+.+.++|++++ +.|+.+|++|...- +...+.+.+++++. +.++++++.= .|+.
T Consensus 36 ~~~~~~~y~~ra----~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~-g~~i~~Ql~h--~Gr~~ 108 (671)
T 1ps9_A 36 AERLAAFYAERA----RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQE-GGKIALQILH--TGRYS 108 (671)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHT-TCCEEEEECC--CGGGS
T ss_pred cHHHHHHHHHHh----cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhc-CCEEEEEecc--CCccc
Confidence 577888888764 57999999996431 11235555666663 5677777631 1111
Q ss_pred ----------------------cCCC-------CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHH
Q psy17603 249 ----------------------SNGE-------SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQL 289 (591)
Q Consensus 249 ----------------------~~G~-------~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l 289 (591)
++-+ .+.++++.+ ...+.++|-+||.+...+.+.+...
T Consensus 109 ~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a---~~aGfd~veih~~~gyl~~qFlsp~ 175 (671)
T 1ps9_A 109 YQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLA---REAGYDGVEVMGSEGYLINEFLTLR 175 (671)
T ss_dssp BSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHH---HHTTCSEEEEEECBTSHHHHHHCTT
T ss_pred CCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHH---HHcCCCEEEEccccchHHHHhCCCc
Confidence 1111 122333333 2367899999998777666665443
No 189
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=38.68 E-value=1.2e+02 Score=29.31 Aligned_cols=90 Identities=18% Similarity=0.198 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCCEEEecc-cCCH----H-----------------HHHHHHHHHHhc-CCCceEEEEEecCCCcccCCC
Q psy17603 196 RPRIQALVEAGADILAIET-IPAS----K-----------------EAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGE 252 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-~~~~----~-----------------Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~ 252 (591)
.+.++.|.++|+|+|.+.+ |++. . ....+++.+|+. ++.|+.+ ++..+ .-...|
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n-~v~~~g- 110 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYN-PIFRIG- 110 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHH-HHHHHC-
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCc-HHHHhh-
Confidence 4456678899999999876 2221 1 112334555543 3788876 31110 011112
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhc
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~ 292 (591)
++..++.+.+ .+++++-+....++.+...++.++++
T Consensus 111 -~~~f~~~~~~---aG~dgvii~dl~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 111 -LEKFCRLSRE---KGIDGFIVPDLPPEEAEELKAVMKKY 146 (262)
T ss_dssp -HHHHHHHHHH---TTCCEEECTTCCHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHH---cCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 3455555533 46777778877777777777777665
No 190
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=38.38 E-value=91 Score=30.78 Aligned_cols=107 Identities=10% Similarity=0.155 Sum_probs=59.1
Q ss_pred chhHHHHHHHHHcCCcEEE--eecCC----cHH-HHHHHHhcccccCCCCCCCC---CcHHHHHHHhhhcCCCCeeEEEE
Q psy17603 471 EPVDKYVTDWLDEGVALVG--GCCRT----YAE-DTLHMKHRLDDWDDKHISNG---ESFTQVARTCYNMNPDQLIAVGV 540 (591)
Q Consensus 471 e~~a~~~~~~~~~G~~~vg--GCcgt----tp~-~i~~l~~~~~~~d~~~l~dG---~~l~~~~~~~~~~~~~~~~avGi 540 (591)
+.+.+.++.+++.|++-|- |+-|= |.+ +.+.++..++..++ +--| .+.+++++.++....-..+++.+
T Consensus 20 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv 97 (288)
T 2nuw_A 20 DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSS 97 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4467777778889985433 44331 122 33333333332222 2222 46677777765433445788777
Q ss_pred cC------CChhhHHHHHHHhhh-cCCcEEEecC---CCCcCCCccccc
Q psy17603 541 NC------VRPLMVSPLIEQLKT-ENIPLVVYPN---SGERYDFHLADE 579 (591)
Q Consensus 541 NC------~~p~~v~~~i~~l~~-~~~pl~vYPN---sG~~yd~~~~~~ 579 (591)
-. .+.+.+.+..+.+.. +++|+++|=+ .|-.+.+++-.+
T Consensus 98 ~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (288)
T 2nuw_A 98 HSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKS 146 (288)
T ss_dssp CCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTT
T ss_pred cCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhc
Confidence 55 123445555555555 5899999975 465666665443
No 191
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=38.25 E-value=2.6e+02 Score=26.39 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=22.2
Q ss_pred HHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCC
Q psy17603 196 RPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQ 234 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~ 234 (591)
.+.++.++++|+++|-+ |+.+....+.+.+..++++++
T Consensus 41 ~~~~~al~~gGv~~iel-~~k~~~~~~~i~~l~~~~~~~ 78 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEV-TLRSQHGLKAIQVLREQRPEL 78 (225)
T ss_dssp HHHHHHHHHTTCCEEEE-ESSSTHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHCCCCEEEE-ecCCccHHHHHHHHHHhCccc
Confidence 46778899999998755 333332223333344566544
No 192
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=36.67 E-value=3e+02 Score=26.58 Aligned_cols=138 Identities=16% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEE-EecccCC------HHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEE
Q psy17603 199 IQALVEAGADIL-AIETIPA------SKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIA 271 (591)
Q Consensus 199 i~~l~~aGvD~i-~~ET~~~------~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~a 271 (591)
++..++.|+|.+ +.+-+.+ +.+++.+.++.+++ +.|+++. +..+..++.+--+.+.....+......+++.
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~-~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~ 175 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF-DLPLVVE-SFPRGGKVVNETAPEIVAYAARIALELGADA 175 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH-TCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc-CCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHcCCCE
Q ss_pred EEecCC-CchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhccccccccccccCCCCc-ceEEe
Q psy17603 272 VGVNCV-RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENI-PLVVY 349 (591)
Q Consensus 272 iGvNC~-~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~-pl~~~ 349 (591)
|++.-. +++.+..+.+.. .. |+++.
T Consensus 176 vkt~~~~~~e~~~~~~~~~-----------------------------------------------------~~~pV~as 202 (263)
T 1w8s_A 176 MKIKYTGDPKTFSWAVKVA-----------------------------------------------------GKVPVLMS 202 (263)
T ss_dssp EEEECCSSHHHHHHHHHHT-----------------------------------------------------TTSCEEEE
T ss_pred EEEcCCCCHHHHHHHHHhC-----------------------------------------------------CCCeEEEE
Q ss_pred cCCCcceeccCCeecCCC--ChHHHHHHHHHHHhcCCcEEeecCCC---CHHHHHHHHHHhhh
Q psy17603 350 PNSGERYDAVNARWIDRD--LCEPVDKYVTDWLDEGVALVGGCCRT---YAEDTLHMKHRLDD 407 (591)
Q Consensus 350 pn~g~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~ 407 (591)
+| -. +.+++.+.++...+.|++ |..+|. ..++..++++.+..
T Consensus 203 ----------GG----i~~~~~~~~l~~i~~~~~aGA~--GvsvgraI~~~~dp~~~~~~l~~ 249 (263)
T 1w8s_A 203 ----------GG----PKTKTEEDFLKQVEGVLEAGAL--GIAVGRNVWQRRDALKFARALAE 249 (263)
T ss_dssp ----------CC----SCCSSHHHHHHHHHHHHHTTCC--EEEESHHHHTSTTHHHHHHHHHH
T ss_pred ----------eC----CCCCCHHHHHHHHHHHHHcCCe--EEEEehhhcCCcCHHHHHHHHHH
No 193
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=36.64 E-value=2.8e+02 Score=26.20 Aligned_cols=153 Identities=13% Similarity=0.149 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEec----------CCCcccCCCCHHHHHHHHHhh
Q psy17603 195 HRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK----------DDKHISNGESFTQVARTCYNM 264 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~----------~~g~l~~G~~~~~~~~~~~~~ 264 (591)
..+.++.++++|+++|-+ |+.+....+.+.+..++++++-+-....+. .-.-+..|..-.++++.+ .
T Consensus 31 ~~~~~~al~~gGv~~iel-~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~~d~~v~~~a--r 107 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEI-TFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPGLNPKIVKLC--Q 107 (224)
T ss_dssp HHHHHHHHHHTTCCEEEE-ETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHH--H
T ss_pred HHHHHHHHHHcCCCEEEE-eccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECCCCHHHHHHH--H
Q ss_pred CCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHH-HHHHHHHHhhccccccccccccCCCC
Q psy17603 265 NPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKE-AQMLCRLLREWPNQKAWLSFSCKTEN 343 (591)
Q Consensus 265 ~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E-~~~a~~~~~~~~~~~~~~s~~~~~~~ 343 (591)
.......+| |..|..+..+.+ .|+|.+-+ ||...- -...++.++... .+
T Consensus 108 ~~g~~~i~G--v~t~~e~~~A~~--------------~Gad~vk~--Fpa~~~gG~~~lk~l~~~~------------~~ 157 (224)
T 1vhc_A 108 DLNFPITPG--VNNPMAIEIALE--------------MGISAVKF--FPAEASGGVKMIKALLGPY------------AQ 157 (224)
T ss_dssp HTTCCEECE--ECSHHHHHHHHH--------------TTCCEEEE--TTTTTTTHHHHHHHHHTTT------------TT
T ss_pred HhCCCEEec--cCCHHHHHHHHH--------------CCCCEEEE--eeCccccCHHHHHHHHhhC------------CC
Q ss_pred cceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhc-CCcEEeecCCCCHHHHH
Q psy17603 344 IPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDE-GVALVGGCCRTYAEDTL 399 (591)
Q Consensus 344 ~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~-Gv~~VGgcCgtgP~~i~ 399 (591)
+|+++ .| |.+++.+.+++ +. |+..||+--=+..+.+.
T Consensus 158 ipvva-----------iG----GI~~~N~~~~l----~agga~~v~gS~i~~~~~i~ 195 (224)
T 1vhc_A 158 LQIMP-----------TG----GIGLHNIRDYL----AIPNIVACGGSWFVEKKLIQ 195 (224)
T ss_dssp CEEEE-----------BS----SCCTTTHHHHH----TSTTBCCEEECGGGCHHHHH
T ss_pred CeEEE-----------EC----CcCHHHHHHHH----hcCCCEEEEEchhcCcchhc
No 194
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=36.58 E-value=41 Score=33.19 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 192 AEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 192 ~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.+--.+++++|.++|+|.|++|-+|. .+++.+.+.+ ..|++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l----~iP~i 200 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECVPV-ELAKRITEAL----AIPVI 200 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHC----SSCEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhC----CCCEE
Confidence 35556788999999999999999984 4555444432 35655
No 195
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=36.48 E-value=4e+02 Score=29.34 Aligned_cols=25 Identities=12% Similarity=-0.067 Sum_probs=20.0
Q ss_pred CCeEEEEecCCCch-hhHHHHHHHHh
Q psy17603 267 DQLIAVGVNCVRPL-MVSSLIEQLKT 291 (591)
Q Consensus 267 ~~~~aiGvNC~~p~-~i~~~l~~l~~ 291 (591)
.++++|=|||.++. .+.+.+....+
T Consensus 168 aGfDgVeih~a~gy~L~~qFlsp~~N 193 (690)
T 3k30_A 168 AGYDIVYVYGAHGYSGVHHFLSKRYN 193 (690)
T ss_dssp HTCSEEEEEECTTCSHHHHHHCTTTC
T ss_pred cCCCEEEEcccccchHHHHhCCCccC
Confidence 57899999999988 88888766543
No 196
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.47 E-value=1.4e+02 Score=30.28 Aligned_cols=26 Identities=4% Similarity=-0.294 Sum_probs=22.2
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCCC
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCRT 393 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCgt 393 (591)
+|+.+++.++.+.+.|++.|-+|||+
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gc 93 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGC 93 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcC
Confidence 46789998888889999999999863
No 197
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=36.31 E-value=3.8e+02 Score=28.42 Aligned_cols=43 Identities=19% Similarity=0.410 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCCEEEeccc-CCHHHHHHHHHHHHh-cCCCceEE
Q psy17603 196 RPRIQALVEAGADILAIETI-PASKEAQMLCRLLRE-WPHQKAWL 238 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~~-~~~~pv~v 238 (591)
.++++.++++|+|++.+.+- +.......+++.+++ +++.|+++
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~ 301 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG 301 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEe
Confidence 46777888999999998654 333334455666664 35788875
No 198
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=35.68 E-value=93 Score=30.91 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=36.4
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhh
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLRE 327 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~ 327 (591)
++.++++.+....+.. -|.+-|-..+.+.++ + ++|+|.+.+.+|+ ..+++.+++.++.
T Consensus 180 ~i~~av~~ar~~~~~~--~I~Vev~t~eea~ea---l-----------~aGaD~I~LDn~~-~~~~~~~v~~l~~ 237 (284)
T 1qpo_A 180 SVVDALRAVRNAAPDL--PCEVEVDSLEQLDAV---L-----------PEKPELILLDNFA-VWQTQTAVQRRDS 237 (284)
T ss_dssp SHHHHHHHHHHHCTTS--CEEEEESSHHHHHHH---G-----------GGCCSEEEEETCC-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCC--CEEEEeCCHHHHHHH---H-----------HcCCCEEEECCCC-HHHHHHHHHHhhc
Confidence 5777887776543322 455655443332222 1 2589999999974 5778888877765
No 199
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=35.64 E-value=80 Score=30.15 Aligned_cols=98 Identities=9% Similarity=0.035 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhcCCcEEee---------cCCCCHHHHHHHHHHh-hhcccCccccccccccCCCCchhhhhhhCCcchhh
Q psy17603 371 PVDKYVTDWLDEGVALVGG---------CCRTYAEDTLHMKHRL-DDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQ 440 (591)
Q Consensus 371 ~~~~~~~~~~~~Gv~~VGg---------cCgtgP~~i~~l~~~l-~~~~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~ 440 (591)
.+.+.++.+.+.|++++.. |-+.||.-++++++.. ... |+ .+++|...|+...
T Consensus 18 ~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~---------------~~-dvhLmv~~p~~~i- 80 (228)
T 3ovp_A 18 NLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDP---------------FF-DMHMMVSKPEQWV- 80 (228)
T ss_dssp GHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSS---------------CE-EEEEECSCGGGGH-
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCC---------------cE-EEEEEeCCHHHHH-
Confidence 4677777777888887765 5678999888887643 111 11 3556788887544
Q ss_pred cchhhhhCCCCcccccccCCCCcccccCCcchhHHHHHHHHHcCCcEEEeecCCcHH
Q psy17603 441 THRDFIKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDEGVALVGGCCRTYAE 497 (591)
Q Consensus 441 ~h~~~i~aG~~v~~~~~y~~~~~~l~~~~~e~~a~~~~~~~~~G~~~vgGCcgttp~ 497 (591)
..|.++|++.++-. +.+ .+...+.++...+.|....--..+.||.
T Consensus 81 --~~~~~aGad~itvH-~Ea---------~~~~~~~i~~i~~~G~k~gval~p~t~~ 125 (228)
T 3ovp_A 81 --KPMAVAGANQYTFH-LEA---------TENPGALIKDIRENGMKVGLAIKPGTSV 125 (228)
T ss_dssp --HHHHHHTCSEEEEE-GGG---------CSCHHHHHHHHHHTTCEEEEEECTTSCG
T ss_pred --HHHHHcCCCEEEEc-cCC---------chhHHHHHHHHHHcCCCEEEEEcCCCCH
Confidence 56889998865432 111 1223445555556787654466666663
No 200
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=35.47 E-value=2e+02 Score=28.10 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=25.5
Q ss_pred HHHh-cCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCC-CCeEEEEecCCCch
Q psy17603 227 LLRE-WPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNP-DQLIAVGVNCVRPL 280 (591)
Q Consensus 227 a~~~-~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~-~~~~aiGvNC~~p~ 280 (591)
.+++ .++.|+++++.. .++++..+.+..... .++++|-+|+..|.
T Consensus 91 ~~~~~~~~~p~~v~l~~---------~~~~~~~~~a~~~~~~~g~d~iei~~~~p~ 137 (311)
T 1ep3_A 91 WLNENFPELPIIANVAG---------SEEADYVAVCAKIGDAANVKAIELNISCPN 137 (311)
T ss_dssp HHHHHCTTSCEEEEECC---------SSHHHHHHHHHHHTTSTTEEEEEEECCSEE
T ss_pred HHHhcCCCCcEEEEEcC---------CCHHHHHHHHHHHhccCCCCEEEEeCCCCC
Confidence 3443 457888888843 233333333322233 67888888876664
No 201
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=35.33 E-value=3.7e+02 Score=27.21 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=38.0
Q ss_pred HHHHHHHHc--CCCEEEecc-cCCHHHHHHHHHHHHhc-CCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEE
Q psy17603 197 PRIQALVEA--GADILAIET-IPASKEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAV 272 (591)
Q Consensus 197 ~~i~~l~~a--GvD~i~~ET-~~~~~Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ai 272 (591)
++++.++++ |+|++.+.+ +.+.......++.+++. ++.|+++.. ..+.+++.... + .++++|
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a~-~---aGaD~I 186 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEELI-L---SGADII 186 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHH-H---TTCSEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHHH-H---hCCCEE
Confidence 567778887 999988764 34444455556666643 477887543 23455554443 2 355665
Q ss_pred Ee
Q psy17603 273 GV 274 (591)
Q Consensus 273 Gv 274 (591)
-+
T Consensus 187 ~v 188 (351)
T 2c6q_A 187 KV 188 (351)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 202
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=34.68 E-value=2.8e+02 Score=25.59 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=22.9
Q ss_pred HHHHHHcCCCEEEeccc-CCHHHHHHHHHHHHhc
Q psy17603 199 IQALVEAGADILAIETI-PASKEAQMLCRLLREW 231 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~-~~~~Ea~aa~~a~~~~ 231 (591)
++..+++|+|+|.+--. -+..++..+++.+++.
T Consensus 35 ~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~ 68 (221)
T 1yad_A 35 IIITIQNEVDFIHIRERSKSAADILKLLDLIFEG 68 (221)
T ss_dssp HHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHh
Confidence 56677899999987533 2456667777777754
No 203
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=34.19 E-value=3.4e+02 Score=26.44 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCEEEecc-cCC-------HH--------------HHHHHHHHHHhc-CCCceEEEEEecCCCcccCC
Q psy17603 195 HRPRIQALVEAGADILAIET-IPA-------SK--------------EAQMLCRLLREW-PHQKAWLSFSCKDDKHISNG 251 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET-~~~-------~~--------------Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G 251 (591)
..+.++.|.++|||+|-+-- |++ +. ....+++.+|+. ++.|+++-...++ -...|
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~np--v~~~g 111 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANL--VFANG 111 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHH--HHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcH--HHHhh
Confidence 34556688899999998873 222 11 112344444543 6778665322222 11223
Q ss_pred CCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhc
Q psy17603 252 ESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~ 292 (591)
++..++.+.+ .+++++-+.=..++....+++.++++
T Consensus 112 --~e~f~~~~~~---aGvdgvii~Dlp~ee~~~~~~~~~~~ 147 (267)
T 3vnd_A 112 --IDEFYTKAQA---AGVDSVLIADVPVEESAPFSKAAKAH 147 (267)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTSCGGGCHHHHHHHHHT
T ss_pred --HHHHHHHHHH---cCCCEEEeCCCCHhhHHHHHHHHHHc
Confidence 3555555543 36677667666677777777777665
No 204
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=34.19 E-value=62 Score=31.96 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEe--cccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAI--ETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~--ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
-+.+++.++-.+.++.|.+.|+|+|++ +|.+. .+++.+|+..+.|++
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~-----~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACNTASA-----YALDALRAKAHFPVY 114 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHH-----HSHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhH-----HHHHHHHHhcCCCEE
Confidence 478999999999999999999999887 44331 224556654567866
No 205
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=34.09 E-value=1.2e+02 Score=31.32 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHh-cCCCceEE
Q psy17603 195 HRPRIQALVEAGADILAIET-IPASKEAQMLCRLLRE-WPHQKAWL 238 (591)
Q Consensus 195 h~~~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~-~~~~pv~v 238 (591)
..++++.++++|+|+|.+.+ .+........++.+|+ +++.|+++
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~ 146 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMA 146 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEE
Confidence 45678889999999998864 3343444445666664 46788887
No 206
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=34.05 E-value=2.2e+02 Score=27.18 Aligned_cols=102 Identities=15% Similarity=0.215 Sum_probs=57.7
Q ss_pred HHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEec--CCC-------cccCCCCHHHHHHHHHhhCCC
Q psy17603 197 PRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCK--DDK-------HISNGESFTQVARTCYNMNPD 267 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~--~~g-------~l~~G~~~~~~~~~~~~~~~~ 267 (591)
+.++.++++|+|-+++.|..- ..-..+.++++++....+.++..+. .++ +..++.++.+.++.+.+ .
T Consensus 88 e~~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~---~ 163 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMAI-KDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN---K 163 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT---T
T ss_pred HHHHHHHHcCCCEEEEccccc-cCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh---c
Confidence 455667789999999998542 2223344566677777788888763 221 23456677888877743 3
Q ss_pred CeEEEEecC-------CCchhhHHHHHHHHhcCCceEEecCCCC
Q psy17603 268 QLIAVGVNC-------VRPLMVSSLIEQLKTENIPLVVYPNSGE 304 (591)
Q Consensus 268 ~~~aiGvNC-------~~p~~i~~~l~~l~~~~~~i~~l~~aG~ 304 (591)
++..|-+++ .+|.. ++++.+.+....+-..+.+|+
T Consensus 164 g~~eil~t~Id~DGt~~G~d~--~l~~~l~~~~~~ipviasGGv 205 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNV--RLYKLIHEIFPNICIQASGGV 205 (243)
T ss_dssp TCCEEEEEETTC-----CCCH--HHHHHHHHHCTTSEEEEESCC
T ss_pred CCcEEEeeeecccccccCCCH--HHHHHHHHhcCCCCEEEEcCC
Confidence 455555665 23432 345555443222344556775
No 207
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=33.48 E-value=47 Score=32.67 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEec--ccCCHHHHHHHHHHHHhc-CCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIE--TIPASKEAQMLCRLLREW-PHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~E--T~~~~~Ea~aa~~a~~~~-~~~pv~ 237 (591)
-+.+++.++-.+.++.|.+.|+|+|++- |.+. .+++.+|+. ++.|++
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~-----~al~~lr~~~~~iPvi 98 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIACNTISA-----IAKDIVQEIAKAIPVI 98 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHH-----HHHHHHHHHHTTSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHH-----HHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999874 4321 244556643 367865
No 208
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=33.30 E-value=28 Score=34.92 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=50.8
Q ss_pred cchhHHHHHHHHHcCCcEEE-eecCCcH--------HHHHHHHhcccccC--CCCCCCCCcHHHHHHHhhhcCCCCeeEE
Q psy17603 470 CEPVDKYVTDWLDEGVALVG-GCCRTYA--------EDTLHMKHRLDDWD--DKHISNGESFTQVARTCYNMNPDQLIAV 538 (591)
Q Consensus 470 ~e~~a~~~~~~~~~G~~~vg-GCcgttp--------~~i~~l~~~~~~~d--~~~l~dG~~l~~~~~~~~~~~~~~~~av 538 (591)
.+...+.++++++.|+.+|= |+.+|.| ++++.+.+.++... +--++=-|.=.++++.+.+ .....
T Consensus 45 ~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~--aGa~i-- 120 (294)
T 2y5s_A 45 RDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALA--AGADL-- 120 (294)
T ss_dssp TTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHH--HTCSE--
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHH--cCCCE--
Confidence 34556778889999999887 7777665 35554444333221 1111111222233333321 11112
Q ss_pred EEcCCChhhHHHHHHHhhhcCCcEEEecCCCC
Q psy17603 539 GVNCVRPLMVSPLIEQLKTENIPLVVYPNSGE 570 (591)
Q Consensus 539 GiNC~~p~~v~~~i~~l~~~~~pl~vYPNsG~ 570 (591)
||=++-.....+++.+++.+.|++++++.|.
T Consensus 121 -INdVsg~~d~~m~~~~a~~~~~vVlmh~~G~ 151 (294)
T 2y5s_A 121 -INDIWGFRQPGAIDAVRDGNSGLCAMHMLGE 151 (294)
T ss_dssp -EEETTTTCSTTHHHHHSSSSCEEEEECCCEE
T ss_pred -EEECCCCCchHHHHHHHHhCCCEEEECCCCC
Confidence 4542222233455556667899999998664
No 209
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=33.28 E-value=87 Score=32.73 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHh----cCCCceEEEEEec
Q psy17603 196 RPRIQALVEAGADILAIETIPASKEAQMLCRLLRE----WPHQKAWLSFSCK 243 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~----~~~~pv~vSf~~~ 243 (591)
-.|+..|.++|+|++=+ |+|+.++|+++-+.-++ ....|++.-+.|+
T Consensus 41 v~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~ 91 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFN 91 (406)
T ss_dssp HHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSS
T ss_pred HHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeeccc
Confidence 46788899999999886 58888887766554443 2467877666553
No 210
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=33.25 E-value=79 Score=30.56 Aligned_cols=38 Identities=11% Similarity=-0.087 Sum_probs=26.5
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHH
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHR 404 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~ 404 (591)
.+++...+.++...+.|+++|+..=..+++.++++.+.
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~~ 200 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKG 200 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh
Confidence 34555555556667899999998855677777776654
No 211
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=32.88 E-value=3.7e+02 Score=26.52 Aligned_cols=35 Identities=17% Similarity=-0.008 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHHh
Q psy17603 370 EPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRL 405 (591)
Q Consensus 370 ~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~l 405 (591)
+.+.+-++.+.+.|++.|=.=|-. .+.++++.+.+
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp-~~~a~~it~~l 213 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVP-AELATQITGKL 213 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCC-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCcEEEEecCC-HHHHHHHHHhC
Confidence 344455566778999999888853 45556666655
No 212
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=32.30 E-value=47 Score=33.38 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=24.1
Q ss_pred HHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 199 IQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
++..+++|+|+|.+.+|+ +.+.+.+++.++ +..++.+|.
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~--~~v~ieaSG 260 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVTE--GRAVLEVSG 260 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHHT--TSEEEEEES
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC--CCCeEEEEc
Confidence 444556788998888875 566666666552 334444444
No 213
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=32.21 E-value=4e+02 Score=30.09 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEe-ccc----CCHHHHHHHHHHHHhc----CCCceEEEEEecCCCcccCCCCHH-H
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAI-ETI----PASKEAQMLCRLLREW----PHQKAWLSFSCKDDKHISNGESFT-Q 256 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~-ET~----~~~~Ea~aa~~a~~~~----~~~pv~vSf~~~~~g~l~~G~~~~-~ 256 (591)
-.+.+...|.+.++.|.++|+++|-+ |.. .+.....++..+++.. ++.++++...+++ +. +
T Consensus 180 ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G~---------~~~~ 250 (765)
T 1u1j_A 180 LLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFAD---------IPAE 250 (765)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSSC---------CCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCCC---------cchH
Confidence 35889999999999999999998743 321 1122223334444444 3445444332221 22 3
Q ss_pred HHHHHHhhCCCC-eEEEEecCCC
Q psy17603 257 VARTCYNMNPDQ-LIAVGVNCVR 278 (591)
Q Consensus 257 ~~~~~~~~~~~~-~~aiGvNC~~ 278 (591)
....+. ..+ ++++++.+..
T Consensus 251 ~~~~l~---~l~~vd~l~lD~v~ 270 (765)
T 1u1j_A 251 AYKTLT---SLKGVTAFGFDLVR 270 (765)
T ss_dssp HHHHHT---TCTTCCEEEEESSS
T ss_pred HHHHHH---cCCCCcEEEEEecC
Confidence 444442 345 7888888755
No 214
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=32.20 E-value=2.8e+02 Score=26.01 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCCEEEeccc--CCHHHHHHHHHHHHhcCCCceEEEEEec
Q psy17603 197 PRIQALVEAGADILAIETI--PASKEAQMLCRLLREWPHQKAWLSFSCK 243 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~--~~~~Ea~aa~~a~~~~~~~pv~vSf~~~ 243 (591)
++++.++++|+|.+.+-+- .+....+ ++++.+....+.+++++.
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~---~~~~~~g~~~i~~~~~~~ 132 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSLIT---QIAQTFGSQAVVVAIDAK 132 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHHHH---HHHHHHCGGGEEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHHHH---HHHHHcCCCcEEEEEEEE
Confidence 3466677889999987653 3332233 333333222455666653
No 215
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=31.84 E-value=43 Score=32.77 Aligned_cols=47 Identities=13% Similarity=0.144 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEe--cccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAI--ETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~--ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.+.+++.+.-.+.++.|.+.|+|+|++ +|.+. .+++.+|+..+.|++
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~-----~~l~~lr~~~~iPvi 93 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTATA-----VVLEEMQKQLPIPVV 93 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHH-----HHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhH-----HHHHHHHHhCCCCEE
Confidence 468899999999999999999999987 44331 245666654567765
No 216
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=31.64 E-value=3.4e+02 Score=25.77 Aligned_cols=22 Identities=9% Similarity=0.056 Sum_probs=13.2
Q ss_pred CCcEEEeecCCcHHHHHHHHhc
Q psy17603 484 GVALVGGCCRTYAEDTLHMKHR 505 (591)
Q Consensus 484 G~~~vgGCcgttp~~i~~l~~~ 505 (591)
+..++.|--=+++++++++...
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~ 222 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQW 222 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHT
T ss_pred CCeEEEECCcCCHHHHHHHHHc
Confidence 4555553333458888887664
No 217
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=31.55 E-value=49 Score=32.48 Aligned_cols=47 Identities=15% Similarity=0.092 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHHHHHH-cCCCEEEe--cccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVE-AGADILAI--ETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~-aGvD~i~~--ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.+.+++.+.-.+.++.|.+ .|+|+|++ +|.+. .+++.+|+..+.|++
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas~-----~~l~~lr~~~~iPVi 94 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTATA-----IALDDIQRSVGIPVV 94 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHH-----HHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhhH-----HHHHHHHHHCCCCEE
Confidence 4788999999989999999 99999887 45431 245666654567755
No 218
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=31.45 E-value=33 Score=34.04 Aligned_cols=40 Identities=18% Similarity=0.100 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 193 EWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 193 ~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
+--.+++++|.++|+|.|++|-+|. .+++.+.+. . ..|++
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~---l-~iP~i 200 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTET---V-SCPTI 200 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHH---C-SSCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHh---C-CCCEE
Confidence 4455688899999999999999984 455544443 2 46755
No 219
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=31.08 E-value=1.3e+02 Score=29.75 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=56.5
Q ss_pred chhHHHHHHHHHcCCcEEE--eecCC----cHH-HHHHHHhcccccCCCCCCC---CCcHHHHHHHhhhcCCCCeeEEEE
Q psy17603 471 EPVDKYVTDWLDEGVALVG--GCCRT----YAE-DTLHMKHRLDDWDDKHISN---GESFTQVARTCYNMNPDQLIAVGV 540 (591)
Q Consensus 471 e~~a~~~~~~~~~G~~~vg--GCcgt----tp~-~i~~l~~~~~~~d~~~l~d---G~~l~~~~~~~~~~~~~~~~avGi 540 (591)
+.+.+.++.+++.|++-|- |+-|= |.+ +.+.++..++..+. +-- +.+.+++++.++....-..+++.+
T Consensus 20 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv 97 (293)
T 1w3i_A 20 EKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIAS 97 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4467777777888985333 33331 122 33333333332222 222 246677777766433345677776
Q ss_pred cC---C---ChhhHHHHHHHhhh-cCCcEEEecC---CCCcCCCccc
Q psy17603 541 NC---V---RPLMVSPLIEQLKT-ENIPLVVYPN---SGERYDFHLA 577 (591)
Q Consensus 541 NC---~---~p~~v~~~i~~l~~-~~~pl~vYPN---sG~~yd~~~~ 577 (591)
-. . +.+.+.+..+.+.. +++|+++|=+ .|-.+.+++-
T Consensus 98 ~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~ 144 (293)
T 1w3i_A 98 YAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVA 144 (293)
T ss_dssp ECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHH
Confidence 54 1 23445555555555 5899999975 4555665543
No 220
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=31.03 E-value=39 Score=36.71 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=45.3
Q ss_pred CCCccceeecc-cccHHHHHHHHHHhhc-cccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHH
Q psy17603 302 SGEHILAIETI-PASKEAQMLCRLLREW-PNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDW 379 (591)
Q Consensus 302 aG~D~l~iET~-~d~~E~~~a~~~~~~~-~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~ 379 (591)
-++|++++||- ||+.+++.-.+.+++. | + ..++|-. ..+| .|....+.+.+..+..++
T Consensus 387 p~aDliW~Et~~P~~~~a~~fa~~i~~~~P-------------~-~~LaYN~-SPSF-----nW~~~~~d~~~~~f~~~l 446 (538)
T 1dqu_A 387 PFADLIWMESKLPDYKQAKEFADGVHAVWP-------------E-QKLAYNL-SPSF-----NWKKAMPRDEQETYIKRL 446 (538)
T ss_dssp TSCSEEECCCSSCCHHHHHHHHHHHHHHCT-------------T-CEEEEEC-CSSS-----CGGGTSCHHHHHSHHHHH
T ss_pred cccceEEeccCCCCHHHHHHHHHHHHHhCC-------------C-ceEEecC-Ccch-----hhhhhCCHHHHHHHHHHH
Confidence 47999999997 9999999999998874 3 1 1334422 2344 244445678899998888
Q ss_pred HhcCC
Q psy17603 380 LDEGV 384 (591)
Q Consensus 380 ~~~Gv 384 (591)
..+|.
T Consensus 447 ~~~G~ 451 (538)
T 1dqu_A 447 GALGY 451 (538)
T ss_dssp HHHTE
T ss_pred HhcCc
Confidence 88884
No 221
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=30.87 E-value=77 Score=32.54 Aligned_cols=54 Identities=6% Similarity=-0.113 Sum_probs=40.3
Q ss_pred CcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHH---hcCCcEEeecCC-----------CCHHHHHHHHHHhhhc
Q psy17603 343 NIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWL---DEGVALVGGCCR-----------TYAEDTLHMKHRLDDW 408 (591)
Q Consensus 343 ~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~---~~Gv~~VGgcCg-----------tgP~~i~~l~~~l~~~ 408 (591)
+.|++++.. |.+++++.+.++.+. +.|+++|=+||+ ..|+.+.++++.+++.
T Consensus 126 ~~pvivsI~--------------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~ 191 (354)
T 4ef8_A 126 KKPLFLSMS--------------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV 191 (354)
T ss_dssp TCCEEEEEC--------------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH
T ss_pred CCcEEEEec--------------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh
Confidence 468887543 234677888877776 568999999998 3688888999888876
Q ss_pred cc
Q psy17603 409 VS 410 (591)
Q Consensus 409 ~~ 410 (591)
..
T Consensus 192 ~~ 193 (354)
T 4ef8_A 192 YP 193 (354)
T ss_dssp CC
T ss_pred hC
Confidence 43
No 222
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=30.86 E-value=2.2e+02 Score=33.41 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEecccCCHHHH----------------------------------------HHHHHHHHhcCCCc
Q psy17603 196 RPRIQALVEAGADILAIETIPASKEA----------------------------------------QMLCRLLREWPHQK 235 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~~~~Ea----------------------------------------~aa~~a~~~~~~~p 235 (591)
.+.+..+.+.|..++.+.|+...... +.+.++.+..++.|
T Consensus 557 ~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~ 636 (1025)
T 1gte_A 557 SSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNI 636 (1025)
T ss_dssp HHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCC
Q ss_pred eEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCchh----------------hHHHHHHHHhcCCceEEe
Q psy17603 236 AWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLM----------------VSSLIEQLKTENIPLVVY 299 (591)
Q Consensus 236 v~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~----------------i~~~l~~l~~~~~~i~~l 299 (591)
+++++ .-|.+.++..+.+......++++|-+|+..|.. +..+++.+++..
T Consensus 637 ~i~~i--------~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~------ 702 (1025)
T 1gte_A 637 VIASI--------MCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV------ 702 (1025)
T ss_dssp EEEEE--------CCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC------
T ss_pred eEEEe--------cCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh------
Q ss_pred cCCCCccceeecccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHH
Q psy17603 300 PNSGEHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDW 379 (591)
Q Consensus 300 ~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~ 379 (591)
++||++...... .++.+.++.+
T Consensus 703 -------------------------------------------~~Pv~vK~~~~~---------------~~~~~~a~~~ 724 (1025)
T 1gte_A 703 -------------------------------------------QIPFFAKLTPNV---------------TDIVSIARAA 724 (1025)
T ss_dssp -------------------------------------------SSCEEEEECSCS---------------SCHHHHHHHH
T ss_pred -------------------------------------------CCceEEEeCCCh---------------HHHHHHHHHH
Q ss_pred HhcCCcEE
Q psy17603 380 LDEGVALV 387 (591)
Q Consensus 380 ~~~Gv~~V 387 (591)
.+.|++.|
T Consensus 725 ~~~G~d~i 732 (1025)
T 1gte_A 725 KEGGADGV 732 (1025)
T ss_dssp HHHTCSEE
T ss_pred HHcCCCEE
No 223
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=30.66 E-value=4.2e+02 Score=26.52 Aligned_cols=164 Identities=15% Similarity=0.211 Sum_probs=0.0
Q ss_pred ceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEec-------------ccCCHHHHHHH
Q psy17603 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIE-------------TIPASKEAQML 224 (591)
Q Consensus 158 ~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~E-------------T~~~~~Ea~aa 224 (591)
+++|.|=+=++..++.| .|.. .+.-.++++.++++|||+|=+. -++.-+|.+-+
T Consensus 27 ~~~vMGIlNvTpDSFsd--~~~~-----------~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH--PHLD-----------LNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC--BCCS-----------HHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh--ccCC-----------HHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Q ss_pred HHHHHhcCCC-ceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCC
Q psy17603 225 CRLLREWPHQ-KAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSG 303 (591)
Q Consensus 225 ~~a~~~~~~~-pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG 303 (591)
+.+++..... .+.||..-.. .++++...+....= ||=++-.....+++.+.+.
T Consensus 94 ~pvI~~l~~~~~vpISIDT~~----------~~Va~aAl~aGa~i-----INDVsg~~~~~m~~v~a~~----------- 147 (314)
T 3tr9_A 94 LPVIDAIKKRFPQLISVDTSR----------PRVMREAVNTGADM-----INDQRALQLDDALTTVSAL----------- 147 (314)
T ss_dssp HHHHHHHHHHCCSEEEEECSC----------HHHHHHHHHHTCCE-----EEETTTTCSTTHHHHHHHH-----------
T ss_pred HHHHHHHHhhCCCeEEEeCCC----------HHHHHHHHHcCCCE-----EEECCCCCchHHHHHHHHh-----------
Q ss_pred CccceeecccccHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceeccC----------CeecCCCChHHHH
Q psy17603 304 EHILAIETIPASKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDAVN----------ARWIDRDLCEPVD 373 (591)
Q Consensus 304 ~D~l~iET~~d~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~~~----------g~~~~~~~~~~~~ 373 (591)
+.|+++-.+.|.+.+.+. . ..+.
T Consensus 148 ---------------------------------------g~~vVlMh~~G~P~tmq~~~~ydvv~ev~--------~~l~ 180 (314)
T 3tr9_A 148 ---------------------------------------KTPVCLMHFPSETRKPGSTTHFYFLQSVK--------KELQ 180 (314)
T ss_dssp ---------------------------------------TCCEEEECCCCTTCCTTSSCHHHHHHHHH--------HHHH
T ss_pred ---------------------------------------CCeEEEECCCCCCcccccccccchHHHHH--------HHHH
Q ss_pred HHHHHHHhcCC---cEE---eec---CCCCHHHHHHHHHHhhh
Q psy17603 374 KYVTDWLDEGV---ALV---GGC---CRTYAEDTLHMKHRLDD 407 (591)
Q Consensus 374 ~~~~~~~~~Gv---~~V---Ggc---CgtgP~~i~~l~~~l~~ 407 (591)
+.++.+.+.|+ ++| |.- -+-+++|-.++++.+..
T Consensus 181 ~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~ 223 (314)
T 3tr9_A 181 ESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPE 223 (314)
T ss_dssp HHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHH
No 224
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=30.41 E-value=1.1e+02 Score=30.01 Aligned_cols=25 Identities=20% Similarity=0.193 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHhcceeeccc-cc
Q psy17603 38 KDAVVQTHRDFIKAGADIVMTNS-YQ 62 (591)
Q Consensus 38 Pe~v~~vH~~yl~AGAdiI~TnT-y~ 62 (591)
++.+.++-+-=.+||||.|-|.| |.
T Consensus 172 ~eei~~A~~ia~eaGADfVKTSTGf~ 197 (260)
T 3r12_A 172 TEEKIAACVISKLAGAHFVKTSTGFG 197 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred HHHHHHHHHHHHHhCcCEEEcCCCCC
Confidence 35566666667788888888887 54
No 225
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=30.37 E-value=1.7e+02 Score=28.77 Aligned_cols=63 Identities=17% Similarity=0.071 Sum_probs=42.1
Q ss_pred HHHHHHHcCCCEEEecc-cCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 198 RIQALVEAGADILAIET-IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~ET-~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
|+....++|+|.+++-+ +-...+++..++.++++ +.-+++.. .+.+++-+.+ ..+++.||+|=
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~l-Gl~~lvev-----------h~~eEl~~A~----~~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFAL-GMDALIEV-----------HDEAEMERAL----KLSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHT-TCEEEEEE-----------CSHHHHHHHT----TSCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHH----hcCCCEEEECC
Confidence 45556789999977664 44556777888888875 66666554 2456654443 35678899983
No 226
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=30.08 E-value=4.3e+02 Score=26.42 Aligned_cols=27 Identities=11% Similarity=-0.214 Sum_probs=21.8
Q ss_pred CCChHHHHHHHHHHHhcCCc----EEeecCC
Q psy17603 366 RDLCEPVDKYVTDWLDEGVA----LVGGCCR 392 (591)
Q Consensus 366 ~~~~~~~~~~~~~~~~~Gv~----~VGgcCg 392 (591)
..+|+.++..++-..++|++ +|=....
T Consensus 196 ~~dp~~Va~aaRiAaELGADs~~tivK~~y~ 226 (307)
T 3fok_A 196 DLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV 226 (307)
T ss_dssp CCSHHHHHHHHHHHHTCSSCCSSEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc
Confidence 35678888888877899999 9998764
No 227
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=29.94 E-value=2.5e+02 Score=27.80 Aligned_cols=86 Identities=16% Similarity=0.233 Sum_probs=50.5
Q ss_pred HHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhcccccc
Q psy17603 254 FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQKA 333 (591)
Q Consensus 254 ~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~~ 333 (591)
+.++++.+....+.. .-||+.|-..+.+..+++ +|+|.+.+-+|+ ..+++.+++.++.
T Consensus 182 i~~av~~ar~~~~~~-~~IgVev~t~eea~eA~~--------------aGaD~I~ld~~~-~~~~k~av~~v~~------ 239 (286)
T 1x1o_A 182 VGEAVRRAKARAPHY-LKVEVEVRSLEELEEALE--------------AGADLILLDNFP-LEALREAVRRVGG------ 239 (286)
T ss_dssp HHHHHHHHHHHSCTT-SCEEEEESSHHHHHHHHH--------------HTCSEEEEESCC-HHHHHHHHHHHTT------
T ss_pred HHHHHHHHHHhCCCC-CEEEEEeCCHHHHHHHHH--------------cCCCEEEECCCC-HHHHHHHHHHhCC------
Confidence 456666665432221 247777765554444432 489999999974 4566666655431
Q ss_pred ccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEee
Q psy17603 334 WLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGG 389 (591)
Q Consensus 334 ~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGg 389 (591)
+.|+.+. + |.+++.+.++ .+.|+++|+.
T Consensus 240 ---------~ipi~As--G-------------GIt~eni~~~----a~tGvD~IsV 267 (286)
T 1x1o_A 240 ---------RVPLEAS--G-------------NMTLERAKAA----AEAGVDYVSV 267 (286)
T ss_dssp ---------SSCEEEE--S-------------SCCHHHHHHH----HHHTCSEEEC
T ss_pred ---------CCeEEEE--c-------------CCCHHHHHHH----HHcCCCEEEE
Confidence 3566652 1 2334555544 4679999986
No 228
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=29.87 E-value=1.6e+02 Score=28.78 Aligned_cols=90 Identities=10% Similarity=0.142 Sum_probs=54.2
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhhccccc
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLREWPNQK 332 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~~~~~~ 332 (591)
++.++++.+.+..+ ...-|++.|..++.+...++ +|+|.+.+-|| ++.+++.+.+.++...
T Consensus 167 ~~~~ai~~~r~~~~-~~~~i~vev~tlee~~~A~~--------------aGaD~I~ld~~-~~~~l~~~v~~l~~~~--- 227 (273)
T 2b7n_A 167 DLKSFLTHARKNLP-FTAKIEIECESFEEAKNAMN--------------AGADIVMCDNL-SVLETKEIAAYRDAHY--- 227 (273)
T ss_dssp SHHHHHHHHGGGSC-TTCCEEEEESSHHHHHHHHH--------------HTCSEEEEETC-CHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHhCC-CCceEEEEcCCHHHHHHHHH--------------cCCCEEEECCC-CHHHHHHHHHHhhccC---
Confidence 36777777754332 22346777766655444432 48999999996 4778887777766420
Q ss_pred cccccccCCCCcceEEecCCCcceeccCCeecCCCChHHHHHHHHHHHhcCCcEEee
Q psy17603 333 AWLSFSCKTENIPLVVYPNSGERYDAVNARWIDRDLCEPVDKYVTDWLDEGVALVGG 389 (591)
Q Consensus 333 ~~~s~~~~~~~~pl~~~pn~g~~~d~~~g~~~~~~~~~~~~~~~~~~~~~Gv~~VGg 389 (591)
.+.|+.+. +|. +++.+.+ +.+.|++.||.
T Consensus 228 ---------~~~~i~As--GGI-------------~~~ni~~----~~~aGaD~i~v 256 (273)
T 2b7n_A 228 ---------PFVLLEAS--GNI-------------SLESINA----YAKSGVDAISV 256 (273)
T ss_dssp ---------TTCEEEEE--SSC-------------CTTTHHH----HHTTTCSEEEC
T ss_pred ---------CCcEEEEE--CCC-------------CHHHHHH----HHHcCCcEEEE
Confidence 13566653 221 2233443 45789999986
No 229
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=29.35 E-value=2.2e+02 Score=26.49 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeE
Q psy17603 196 RPRIQALVEAGADILAIE-----TIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI 270 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~E-----T~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ 270 (591)
.+.++.+.++|+|++-+- .++++......++.+++..+.|+.+-+.+.+ ..+.++.+.+ .+++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd---------~~~~v~~~~~---~Gad 93 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE---------PDQRVPDFIK---AGAD 93 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS---------HHHHHHHHHH---TTCS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC---------HHHHHHHHHH---cCCC
Confidence 455667888999988663 2233322223444555545668777775543 2234444432 3556
Q ss_pred EEEecCC--CchhhHHHHHHHHhc
Q psy17603 271 AVGVNCV--RPLMVSSLIEQLKTE 292 (591)
Q Consensus 271 aiGvNC~--~p~~i~~~l~~l~~~ 292 (591)
+|-+-.. .+......++.+++.
T Consensus 94 ~v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 94 IVSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp EEEEECSTTTCSCHHHHHHHHHHT
T ss_pred EEEEEecCccchhHHHHHHHHHHc
Confidence 6655555 444555666666544
No 230
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=29.29 E-value=28 Score=35.25 Aligned_cols=25 Identities=40% Similarity=0.555 Sum_probs=21.7
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++...+|.+.+..|-+||||+|+|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 3556789999999999999999974
No 231
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=29.21 E-value=35 Score=34.19 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=6.5
Q ss_pred HcCCCEEEecccCCHHHHHHHHHHH
Q psy17603 204 EAGADILAIETIPASKEAQMLCRLL 228 (591)
Q Consensus 204 ~aGvD~i~~ET~~~~~Ea~aa~~a~ 228 (591)
++|+|+|.+.||+ +.+.+.+++.+
T Consensus 217 ~aGaD~I~ld~~~-~~~l~~~v~~l 240 (294)
T 3c2e_A 217 EAGADVIMLDNFK-GDGLKMCAQSL 240 (294)
T ss_dssp HHTCSEEECCC--------------
T ss_pred HcCCCEEEECCCC-HHHHHHHHHHh
Confidence 3466666666643 33444444433
No 232
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=29.01 E-value=46 Score=33.33 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=47.1
Q ss_pred chhHHHHHHHHHcCCcEEE-eecCCcHH--------HHHHHHhcccccC--CCC----CCCCCcHHHHHHHhhhcCCCCe
Q psy17603 471 EPVDKYVTDWLDEGVALVG-GCCRTYAE--------DTLHMKHRLDDWD--DKH----ISNGESFTQVARTCYNMNPDQL 535 (591)
Q Consensus 471 e~~a~~~~~~~~~G~~~vg-GCcgttp~--------~i~~l~~~~~~~d--~~~----l~dG~~l~~~~~~~~~~~~~~~ 535 (591)
+...+.++++++.|+.+|= |+.+|.|. +++.+.+.++... +-- +.+-+-++++++.-
T Consensus 52 ~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aG-------- 123 (294)
T 2dqw_A 52 ERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLG-------- 123 (294)
T ss_dssp -CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhC--------
Confidence 3446677888999999887 87777763 3443333332221 111 22223333333321
Q ss_pred eEEEEcCCChhhHHHHHHHhhhcCCcEEEecCC-CC
Q psy17603 536 IAVGVNCVRPLMVSPLIEQLKTENIPLVVYPNS-GE 570 (591)
Q Consensus 536 ~avGiNC~~p~~v~~~i~~l~~~~~pl~vYPNs-G~ 570 (591)
+--||=++-.....+++..++.+.|++++++. |.
T Consensus 124 -a~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~ 158 (294)
T 2dqw_A 124 -AHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPD 158 (294)
T ss_dssp -CSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSC
T ss_pred -CCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCC
Confidence 11356533334456666666678999999987 54
No 233
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=28.89 E-value=2.9e+02 Score=29.98 Aligned_cols=89 Identities=8% Similarity=0.120 Sum_probs=54.0
Q ss_pred HHHHHHcCCCEEE-ecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEec--
Q psy17603 199 IQALVEAGADILA-IETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVN-- 275 (591)
Q Consensus 199 i~~l~~aGvD~i~-~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvN-- 275 (591)
++...++|+|+|- |-..+.++.++.+++++++. +..+-+++++.... ..++..+++.+......++..|.+-
T Consensus 123 ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~L~DT 197 (539)
T 1rqb_A 123 VDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKA-GKHAQGTICYTISP----VHTVEGYVKLAGQLLDMGADSIALKDM 197 (539)
T ss_dssp HHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCST----TCCHHHHHHHHHHHHHTTCSEEEEEET
T ss_pred HHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHC-CCeEEEEEEeeeCC----CCCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 3456789999875 44556677777888888874 56665555544322 2345444444332222455555552
Q ss_pred --CCCchhhHHHHHHHHhc
Q psy17603 276 --CVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 276 --C~~p~~i~~~l~~l~~~ 292 (591)
...|..+..+++.+++.
T Consensus 198 ~G~~~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 198 AALLKPQPAYDIIKAIKDT 216 (539)
T ss_dssp TCCCCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHh
Confidence 35699888888888653
No 234
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=28.79 E-value=4.1e+02 Score=25.72 Aligned_cols=70 Identities=7% Similarity=0.060 Sum_probs=38.4
Q ss_pred HHHHHHHHHH-cCCCEEEeccc------------CCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHH
Q psy17603 195 HRPRIQALVE-AGADILAIETI------------PASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTC 261 (591)
Q Consensus 195 h~~~i~~l~~-aGvD~i~~ET~------------~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~ 261 (591)
|.+.++.+.+ +|+|.|-++-. .+...+..+++.+++..+.|+++-++.. -+++.+.++.+
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~-------~~~~~~~a~~l 185 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN-------VTDIVPIAKAV 185 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-------SSCSHHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-------hHHHHHHHHHH
Confidence 4444555556 89998876421 1233446666677654467887766421 12345555555
Q ss_pred HhhCCCCeEEEEe
Q psy17603 262 YNMNPDQLIAVGV 274 (591)
Q Consensus 262 ~~~~~~~~~aiGv 274 (591)
.+ .++++|-+
T Consensus 186 ~~---~G~d~i~v 195 (311)
T 1ep3_A 186 EA---AGADGLTM 195 (311)
T ss_dssp HH---TTCSEEEE
T ss_pred HH---cCCCEEEE
Confidence 43 34555544
No 235
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=28.73 E-value=29 Score=35.06 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.7
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++...+|.+.+..|-+||||+|+|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 3556789999999999999999974
No 236
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=28.67 E-value=2.1e+02 Score=27.71 Aligned_cols=63 Identities=14% Similarity=0.222 Sum_probs=41.8
Q ss_pred HHHHHHHcCCCEEEec-ccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCC-CeEEEEec
Q psy17603 198 RIQALVEAGADILAIE-TIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPD-QLIAVGVN 275 (591)
Q Consensus 198 ~i~~l~~aGvD~i~~E-T~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~-~~~aiGvN 275 (591)
|+.....+|+|.+++- ++-...+.+..++.++++ ++.++|-. .+.+|+.+.+ .. +++.||+|
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l-Gl~~lvEv-----------~~~eE~~~A~----~l~g~~iIGin 178 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEEL-GMDSLVEV-----------HSREDLEKVF----SVIRPKIIGIN 178 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT-TCEEEEEE-----------CSHHHHHHHH----TTCCCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc-CCeEEEEe-----------CCHHHHHHHH----hcCCCCEEEEe
Confidence 3444667899997766 443556778888888875 67666554 2345554444 34 78899998
Q ss_pred C
Q psy17603 276 C 276 (591)
Q Consensus 276 C 276 (591)
=
T Consensus 179 n 179 (251)
T 1i4n_A 179 T 179 (251)
T ss_dssp C
T ss_pred C
Confidence 5
No 237
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=28.65 E-value=2e+02 Score=28.56 Aligned_cols=54 Identities=13% Similarity=0.302 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHH
Q psy17603 254 FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRL 324 (591)
Q Consensus 254 ~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~ 324 (591)
+.++++.+.+..+. . -|++.|...+.+..++ ++|+|.+.+-|| ++.+++.+++.
T Consensus 195 i~~ai~~~r~~~~~-~-kI~vev~tlee~~eA~--------------~aGaD~I~ld~~-~~e~l~~~v~~ 248 (296)
T 1qap_A 195 VRQAVEKAFWLHPD-V-PVEVEVENLDELDDAL--------------KAGADIIMLDNF-NTDQMREAVKR 248 (296)
T ss_dssp HHHHHHHHHHHSTT-S-CEEEEESSHHHHHHHH--------------HTTCSEEEESSC-CHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCC-C-cEEEEeCCHHHHHHHH--------------HcCCCEEEECCC-CHHHHHHHHHH
Confidence 56677766543332 2 4667765544433332 258999999884 45666666543
No 238
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=28.07 E-value=4.1e+02 Score=27.39 Aligned_cols=158 Identities=8% Similarity=-0.009 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEecccCC------------------HHHHHHHHHHHHhcCCCceEEEEE---------
Q psy17603 189 ATMAEWHRPRIQALVEAGADILAIETIPA------------------SKEAQMLCRLLREWPHQKAWLSFS--------- 241 (591)
Q Consensus 189 e~l~~~h~~~i~~l~~aGvD~i~~ET~~~------------------~~Ea~aa~~a~~~~~~~pv~vSf~--------- 241 (591)
+.+.++|+++++ |+-+|++|-..- +...+.+++++++ .+.++++.+.
T Consensus 50 ~~~~~yy~~rA~-----G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~-~G~~i~~QL~H~Gr~~~~~ 123 (402)
T 2hsa_B 50 AALGEYYEQRAT-----AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHA-KGAVIFCQLWHVGRASHEV 123 (402)
T ss_dssp HHHHHHHHHHCC-----TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHHHH-TTCEEEEEEECCTTSCCGG
T ss_pred HHHHHHHHHHhc-----cCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHHHh-cCCeEEEEeccCCcccccc
Q ss_pred ------------------------------ecCCCcccCCCCHHHHHHHHHh----hCCCCeEEEEecCCCchhhHHHHH
Q psy17603 242 ------------------------------CKDDKHISNGESFTQVARTCYN----MNPDQLIAVGVNCVRPLMVSSLIE 287 (591)
Q Consensus 242 ------------------------------~~~~g~l~~G~~~~~~~~~~~~----~~~~~~~aiGvNC~~p~~i~~~l~ 287 (591)
-....+-++-+.+.++++.+.. ....+.++|=|||.+-..+.+.+.
T Consensus 124 ~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLs 203 (402)
T 2hsa_B 124 YQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLK 203 (402)
T ss_dssp GCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHC
T ss_pred cccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccC
Q ss_pred HHHhcCCceEEecCCCCccceeecccc---------cHHHHHHHHHHhhccccccccccccCCCCcceEEecCCCcceec
Q psy17603 288 QLKTENIPLVVYPNSGEHILAIETIPA---------SKEAQMLCRLLREWPNQKAWLSFSCKTENIPLVVYPNSGERYDA 358 (591)
Q Consensus 288 ~l~~~~~~i~~l~~aG~D~l~iET~~d---------~~E~~~a~~~~~~~~~~~~~~s~~~~~~~~pl~~~pn~g~~~d~ 358 (591)
.....+ .| ..-+...++++|+.- ...||.+-.+....++.
T Consensus 204 p~~N~R-------------------tD~yGGslenR~rf~~Eiv~aVr~av------------g~~~V~vRls~~~~~~g 252 (402)
T 2hsa_B 204 DGINDR-------------------TDEYGGSLANRCKFITQVVQAVVSAI------------GADRVGVRVSPAIDHLD 252 (402)
T ss_dssp TTTCCC-------------------CSTTSSSHHHHHHHHHHHHHHHHHHH------------CGGGEEEEECSSCCSTT
T ss_pred CccCcc-------------------CCccCcChhhhhHHHHHHHHHHHHHh------------CCCcEEEEeccccccCC
Q ss_pred cCCeecCCCChHHHHHHHHHHHhcC------CcEE
Q psy17603 359 VNARWIDRDLCEPVDKYVTDWLDEG------VALV 387 (591)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~~~~G------v~~V 387 (591)
..+ +.+.+++..+++.+.+.| +++|
T Consensus 253 ~~~----~~~~~~~~~la~~le~~G~~gg~~vd~i 283 (402)
T 2hsa_B 253 AMD----SNPLSLGLAVVERLNKIQLHSGSKLAYL 283 (402)
T ss_dssp CCC----SCHHHHHHHHHHHHHHHHHHHTSCCSEE
T ss_pred CCC----CCCHHHHHHHHHHHHhcCCccCCceEEE
No 239
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=27.90 E-value=4.3e+02 Score=26.79 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCCHHHHHH---HHHHHHHHHHHcCCCEEEeccc----------C-----------CH----HHHHHHHHHHHhcCC-Cc
Q psy17603 185 HVSEATMAE---WHRPRIQALVEAGADILAIETI----------P-----------AS----KEAQMLCRLLREWPH-QK 235 (591)
Q Consensus 185 ~~~~e~l~~---~h~~~i~~l~~aGvD~i~~ET~----------~-----------~~----~Ea~aa~~a~~~~~~-~p 235 (591)
.++.+++.+ .|.+-++...++|.|.|-+.-- | ++ +-+..+++++|+.-+ .|
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~p 229 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAER 229 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCc
Confidence 467777764 4555555568899999987531 1 11 113445566664322 28
Q ss_pred eEEEEEecCC-CcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 236 AWLSFSCKDD-KHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 236 v~vSf~~~~~-g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
+.|-++..+. ....+|.+++++++.+......+++.|-+-.
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 7776654321 1123456666655444333335666666644
No 240
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=27.68 E-value=29 Score=35.32 Aligned_cols=25 Identities=28% Similarity=0.606 Sum_probs=21.6
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++...+|.+.+..|-+||||+|+|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 3556789999999999999999974
No 241
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=27.37 E-value=29 Score=34.93 Aligned_cols=25 Identities=20% Similarity=0.432 Sum_probs=21.6
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++...+|.+.+..|-+||||+|+|.
T Consensus 287 iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 287 IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 3556789999999999999999974
No 242
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=27.27 E-value=4.4e+02 Score=25.67 Aligned_cols=46 Identities=11% Similarity=0.011 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHhcceeeccccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMTNSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~TnTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|.|-|..+== +-+. .-++.++-.++++..++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--tGE~----~~Ls~~Er~~v~~~~~~ 64 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT--TGES----PTLSKSEHEQVVEITIK 64 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG--GGTG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--ccCh----hhCCHHHHHHHHHHHHH
Confidence 4677888888889999997654321 2122 13556666666666554
No 243
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=27.26 E-value=90 Score=31.02 Aligned_cols=36 Identities=22% Similarity=0.243 Sum_probs=19.3
Q ss_pred HHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 202 LVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 202 l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
.+++|+|+|.+-.|+ ..+.+.+++.++ ...|+.+|.
T Consensus 212 A~~aGaD~I~ld~~~-~~~~k~av~~v~--~~ipi~AsG 247 (286)
T 1x1o_A 212 ALEAGADLILLDNFP-LEALREAVRRVG--GRVPLEASG 247 (286)
T ss_dssp HHHHTCSEEEEESCC-HHHHHHHHHHHT--TSSCEEEES
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhC--CCCeEEEEc
Confidence 345677777777763 344454544443 134555443
No 244
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.11 E-value=4.7e+02 Score=25.90 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|.|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~----~~Ls~~Er~~v~~~~v~ 87 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTG---ES----ATLDVEEHIQVIRRVVD 87 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGG---TG----GGCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch----hhCCHHHHHHHHHHHHH
Confidence 4578888888889999995544 3332 22 23566666676666554
No 245
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=26.90 E-value=4.1e+02 Score=25.14 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=34.8
Q ss_pred CCCHHHHHHHH---HHHHHHHHHcCCCEEEec----cc-CCHHHHHHHHHHHHhcCCCceE
Q psy17603 185 HVSEATMAEWH---RPRIQALVEAGADILAIE----TI-PASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 185 ~~~~e~l~~~h---~~~i~~l~~aGvD~i~~E----T~-~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.++.+++.++- .+-++.|.++|+|+|++- || ....-.+.+.+.+++..+.|+.
T Consensus 42 ~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~ 102 (240)
T 3ixl_A 42 SVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT 102 (240)
T ss_dssp CSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE
Confidence 46788888773 455677788999999985 33 2233334556666655577866
No 246
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=26.81 E-value=1.7e+02 Score=27.51 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCCEEEecc--cCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcc-cCCC-----CHHHHHHHHHhhCCCC
Q psy17603 197 PRIQALVEAGADILAIET--IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHI-SNGE-----SFTQVARTCYNMNPDQ 268 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET--~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l-~~G~-----~~~~~~~~~~~~~~~~ 268 (591)
++++.++++|+|.+.+-+ +++... +.++++.+. ..+.+++.+.. |+. .+|- +..+.++.+.+ .+
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l~~p~~---~~~~~~~~g-~~~~~~l~~~~-g~v~~~g~~~~~~~~~e~~~~~~~---~G 159 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAALETPEW---VAKVIAEHG-DKIAVGLDVRG-TTLRGRGWTRDGGDLYETLDRLNK---EG 159 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHH---HHHHHHHHG-GGEEEEEEEET-TEECCSSSCCCCCBHHHHHHHHHH---TT
T ss_pred HHHHHHHHcCCCEEEECchHhhCHHH---HHHHHHHcC-CcEEEEEEccC-CEEEEcCcccCCCCHHHHHHHHHh---CC
Confidence 346667789999987654 444433 333444443 45677777652 211 1221 55566565543 34
Q ss_pred eEEEEecCCCch-----hhHHHHHHHHhcCCceEEecCCCC
Q psy17603 269 LIAVGVNCVRPL-----MVSSLIEQLKTENIPLVVYPNSGE 304 (591)
Q Consensus 269 ~~aiGvNC~~p~-----~i~~~l~~l~~~~~~i~~l~~aG~ 304 (591)
+..|.++...+. .-...++.+.+.. .+-..+++|+
T Consensus 160 ~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~-~ipvia~GGI 199 (244)
T 1vzw_A 160 CARYVVTDIAKDGTLQGPNLELLKNVCAAT-DRPVVASGGV 199 (244)
T ss_dssp CCCEEEEEC-------CCCHHHHHHHHHTC-SSCEEEESCC
T ss_pred CCEEEEeccCcccccCCCCHHHHHHHHHhc-CCCEEEECCC
Confidence 455555543322 1234555555432 2344556665
No 247
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=26.77 E-value=4.4e+02 Score=27.62 Aligned_cols=42 Identities=31% Similarity=0.370 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHHh-cCCCceE
Q psy17603 196 RPRIQALVEAGADILAIETIP-ASKEAQMLCRLLRE-WPHQKAW 237 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~-~~~Ea~aa~~a~~~-~~~~pv~ 237 (591)
.++++.+.++|+|.|++.+.. +.......++.+++ +++.|++
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi 278 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLI 278 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEE
T ss_pred HHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEe
Confidence 367888899999999998743 23333444455553 4578887
No 248
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=26.73 E-value=60 Score=32.27 Aligned_cols=41 Identities=27% Similarity=0.212 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 192 AEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 192 ~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.+--.+++++|.++|+|.|++|-+|. .+++.+.+. . ..|++
T Consensus 178 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~---l-~iP~i 218 (281)
T 1oy0_A 178 AEQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGK---L-TIPTV 218 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHH---C-SSCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHh---C-CCCEE
Confidence 35566788999999999999999984 455544443 2 46755
No 249
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=26.63 E-value=4.5e+02 Score=26.65 Aligned_cols=44 Identities=9% Similarity=0.026 Sum_probs=36.2
Q ss_pred CCChHHHHHHHHHHHhcCCcEEeecCCCCHHHHHHHHHHhhhcc
Q psy17603 366 RDLCEPVDKYVTDWLDEGVALVGGCCRTYAEDTLHMKHRLDDWV 409 (591)
Q Consensus 366 ~~~~~~~~~~~~~~~~~Gv~~VGgcCgtgP~~i~~l~~~l~~~~ 409 (591)
..+++.+.+.++++.+.|.+.|=.++|..|+...+.++.+++..
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~~~v~avR~a~ 186 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIR 186 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHHc
Confidence 34678888888888899999999998888888888888887754
No 250
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=26.23 E-value=34 Score=34.92 Aligned_cols=25 Identities=40% Similarity=0.585 Sum_probs=21.5
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++...+|.+.+..|.+||||+|+|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 3556789999999999999999973
No 251
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=26.11 E-value=4.4e+02 Score=26.75 Aligned_cols=52 Identities=12% Similarity=0.062 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccCCH-HHHHHHHHHHHhcCCCceEEE
Q psy17603 187 SEATMAEWHRPRIQALVEAGADILAIETIPAS-KEAQMLCRLLREWPHQKAWLS 239 (591)
Q Consensus 187 ~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~-~Ea~aa~~a~~~~~~~pv~vS 239 (591)
..++..+.-.+.++.|.+.|+.-|+=-|-..+ ..+....++.++ ++..++.+
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~-tGv~IV~~ 129 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEE-TGLNIICA 129 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHH-HCCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHH-cCCCEEEe
Confidence 44444444455666788899998876665443 334444455554 56665544
No 252
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=25.52 E-value=3.6e+02 Score=26.25 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCCEEEecc-cCCH---------------------HHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCH
Q psy17603 197 PRIQALVEAGADILAIET-IPAS---------------------KEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESF 254 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET-~~~~---------------------~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~ 254 (591)
+.++.|.++ +|+|.+.+ |++. ......++.+|+.++.|+++ |...+ .-...| .
T Consensus 34 ~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~-m~y~n-~v~~~g--~ 108 (271)
T 1ujp_A 34 QAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFL-MTYLN-PVLAWG--P 108 (271)
T ss_dssp HHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEE-ECCHH-HHHHHC--H
T ss_pred HHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE-EecCc-HHHHhh--H
Confidence 345678888 99999976 3321 11223455555546788776 42111 111112 2
Q ss_pred HHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhc
Q psy17603 255 TQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTE 292 (591)
Q Consensus 255 ~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~ 292 (591)
...++.+.+ .+++++-+.+..++....+++.++++
T Consensus 109 ~~f~~~~~~---aG~dGviv~Dl~~ee~~~~~~~~~~~ 143 (271)
T 1ujp_A 109 ERFFGLFKQ---AGATGVILPDLPPDEDPGLVRLAQEI 143 (271)
T ss_dssp HHHHHHHHH---HTCCEEECTTCCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHH---cCCCEEEecCCCHHHHHHHHHHHHHc
Confidence 445555533 35677778887788888888887765
No 253
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=25.50 E-value=4.9e+02 Score=26.12 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHHHhcCCcEEeecCCC-CHHHHHHHHHHhhhcc
Q psy17603 368 LCEPVDKYVTDWLDEGVALVGGCCRT-YAEDTLHMKHRLDDWV 409 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~Gv~~VGgcCgt-gP~~i~~l~~~l~~~~ 409 (591)
+++.+.+.++++.+.|-+.|=..+|. .++...++++.+++..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~ 188 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL 188 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 57788888888889998888888776 6666667777776653
No 254
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=25.38 E-value=4.8e+02 Score=25.43 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=23.4
Q ss_pred HHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEE
Q psy17603 201 ALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSF 240 (591)
Q Consensus 201 ~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf 240 (591)
.|+++|++.+-+|--. |....++++.+ .+.||+--+
T Consensus 102 rl~kaGa~aVklEgg~---e~~~~I~al~~-agipV~gHi 137 (264)
T 1m3u_A 102 TVMRAGANMVKIEGGE---WLVETVQMLTE-RAVPVCGHL 137 (264)
T ss_dssp HHHHTTCSEEECCCSG---GGHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHcCCCEEEECCcH---HHHHHHHHHHH-CCCCeEeee
Confidence 4667999999999853 33333444444 478887444
No 255
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=25.10 E-value=1.5e+02 Score=28.67 Aligned_cols=25 Identities=24% Similarity=0.458 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHhcceeeccc-cc
Q psy17603 38 KDAVVQTHRDFIKAGADIVMTNS-YQ 62 (591)
Q Consensus 38 Pe~v~~vH~~yl~AGAdiI~TnT-y~ 62 (591)
++.+.++-+-=.+||||.|-|.| |.
T Consensus 156 ~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 156 NEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred HHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 44466666666777888888877 54
No 256
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=24.90 E-value=99 Score=30.30 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=36.3
Q ss_pred HHcCCCEEEe-cccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 203 VEAGADILAI-ETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 203 ~~aGvD~i~~-ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
...|+|.+++ =.+-+-.+.+...+.++++ ++-+.|-+ .+-+|+-+.+. .++..||||.
T Consensus 123 r~~GADaILLI~a~L~~~~l~~l~~~A~~l-Gl~~LvEV-----------h~~~El~rAl~----~~a~iIGINN 181 (258)
T 4a29_A 123 YNLGADTVLLIVKILTERELESLLEYARSY-GMEPLILI-----------NDENDLDIALR----IGARFIGIMS 181 (258)
T ss_dssp HHHTCSEEEEEGGGSCHHHHHHHHHHHHHT-TCCCEEEE-----------SSHHHHHHHHH----TTCSEEEECS
T ss_pred HHcCCCeeehHHhhcCHHHHHHHHHHHHHH-hHHHHHhc-----------chHHHHHHHhc----CCCcEEEEeC
Confidence 3469998643 4455566777777888774 66666654 12344433331 3567899998
No 257
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=24.76 E-value=57 Score=32.27 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceE
Q psy17603 186 VSEATMAEWHRPRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 186 ~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
.+.+++.+.-.+.++.|.+.|+|+|++-..... ..+++.+|+..+.|++
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas---~~~l~~lr~~~~iPVi 112 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT---AVALEYLQKTLSISVI 112 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHHHHHHHHHCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh---HHHHHHHHHhCCCCEE
Confidence 478899999998899998899999987433211 1245566654567765
No 258
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=24.53 E-value=1.6e+02 Score=29.38 Aligned_cols=76 Identities=17% Similarity=0.078 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCEEE--ecccC-----------CHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHh
Q psy17603 197 PRIQALVEAGADILA--IETIP-----------ASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYN 263 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~--~ET~~-----------~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~ 263 (591)
+.++.|.++|+|.+. +||+. +.++...+++.+++. +.++-..+-++ . |++.++.++.+..
T Consensus 153 e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~-Gi~v~~~~i~G-----l-get~e~~~~~l~~ 225 (350)
T 3t7v_A 153 ATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQ-GYCVEDGILTG-----V-GNDIESTILSLRG 225 (350)
T ss_dssp HHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHH-TCEEEEEEEES-----S-SCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHc-CCeEccceEee-----c-CCCHHHHHHHHHH
Confidence 345567789999764 67763 234455566666653 66766666554 1 6777777666543
Q ss_pred hCCCCeEEEEecCCCc
Q psy17603 264 MNPDQLIAVGVNCVRP 279 (591)
Q Consensus 264 ~~~~~~~aiGvNC~~p 279 (591)
....++..++++...|
T Consensus 226 l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 226 MSTNDPDMVRVMTFLP 241 (350)
T ss_dssp HHHTCCSEEEEEECCC
T ss_pred HHhCCCCEEEecceee
Confidence 2334566778877655
No 259
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=24.29 E-value=5.5e+02 Score=25.70 Aligned_cols=45 Identities=24% Similarity=0.282 Sum_probs=21.5
Q ss_pred ceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEec
Q psy17603 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIE 213 (591)
Q Consensus 158 ~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~E 213 (591)
+++|.|=+=-+..++.||..|. +.+.+. ++++.++++|+|+|=+.
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a~----~~A~~~v~~GAdIIDIG 85 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAAR----DAVHRAVADGADVIDVG 85 (318)
T ss_dssp SCEEEEEEC---------------------CHHHH----HHHHHHHHTTCSEEEEC
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHHH----HHHHHHHHCCCCEEEEC
Confidence 4678887766667788875432 234433 34556789999999776
No 260
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=23.78 E-value=37 Score=34.42 Aligned_cols=24 Identities=25% Similarity=0.461 Sum_probs=21.2
Q ss_pred ccCHHHHHHHHHHHHHHhcceeecc
Q psy17603 35 ATAKDAVVQTHRDFIKAGADIVMTN 59 (591)
Q Consensus 35 ~~~Pe~v~~vH~~yl~AGAdiI~Tn 59 (591)
++ ..+|.+.+..|-+||||+|+|.
T Consensus 301 iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 301 LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 45 7799999999999999999973
No 261
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=23.43 E-value=5.2e+02 Score=25.17 Aligned_cols=45 Identities=13% Similarity=0.228 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|.|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~~ 64 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTG---ES----PTLTFEEHEKVIEFAVK 64 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTT---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc---Ch----hhCCHHHHHHHHHHHHH
Confidence 4677888888889999996544 3322 22 13556666666666554
No 262
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=23.28 E-value=1.7e+02 Score=29.22 Aligned_cols=56 Identities=7% Similarity=0.187 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHH
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLL 325 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~ 325 (591)
++.++++.+....+. .-|-|-|-..+.+..++ ++|+|.+.+.+|+ +.+++.+++.+
T Consensus 195 ~i~~Av~~~r~~~p~--~~ieVEvdtlde~~eAl--------------~aGaD~I~LDn~~-~~~l~~av~~i 250 (298)
T 3gnn_A 195 GVGEALDAAFALNAE--VPVQIEVETLDQLRTAL--------------AHGARSVLLDNFT-LDMMRDAVRVT 250 (298)
T ss_dssp CHHHHHHHHHHHC----CCCEEEESSHHHHHHHH--------------HTTCEEEEEESCC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCC--CCEEEEeCCHHHHHHHH--------------HcCCCEEEECCCC-HHHHHHHHHHh
Confidence 578888877653322 22445554444333322 2589999999975 57788777665
No 263
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=22.96 E-value=2.3e+02 Score=28.95 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCCEEEecccC-CHHHHHHHHHHHHhcCCCceEE
Q psy17603 196 RPRIQALVEAGADILAIETIP-ASKEAQMLCRLLREWPHQKAWL 238 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET~~-~~~Ea~aa~~a~~~~~~~pv~v 238 (591)
.++++.++++|+|+|.+.+-. +.......++.+++.-+.|+++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Viv 150 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIV 150 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEE
Confidence 467888999999999987644 3344444555555433788887
No 264
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.63 E-value=5.6e+02 Score=25.24 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|+|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~----~~Lt~~Er~~v~~~~v~ 72 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILG---EA----PKLDAAEAEAVATRFIK 72 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGG---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCc---Ch----hhCCHHHHHHHHHHHHH
Confidence 4678888888889999995544 3332 21 13556666666655543
No 265
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=22.33 E-value=5.5e+02 Score=24.97 Aligned_cols=136 Identities=21% Similarity=0.250 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhccccCCCCccccccccccCCCCCccCCCCcccCccchhhhhhhHhhhhccccCCCCcceeEeecc
Q psy17603 86 SVDYVKEAIALEATHARIRSDDPARDILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRLITDDPARDILIAGSV 165 (591)
Q Consensus 86 av~lA~~a~~~~~~~~~~~~~~~~~~~~va~~~gp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vagsi 165 (591)
++-.+|.+... .+..|-+-+.|+|. +-+|--|-
T Consensus 123 gag~trg~L~~-------------~~T~VNaLVSPTG~----------------------------------~G~VkIST 155 (275)
T 3m6y_A 123 SVGATRANLGE-------------KDSWINSLVSPTGK----------------------------------VGYVNIST 155 (275)
T ss_dssp GHHHHHHHHTT-------------CCCEEEEEEBCCSS----------------------------------TTEEECCC
T ss_pred chHHHHhhcCC-------------CccEEEEEEcCCCC----------------------------------cceEEecc
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEecccC---CHHHHHHHHHHHHhcCCCceEEEEEe
Q psy17603 166 GPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIETIP---ASKEAQMLCRLLREWPHQKAWLSFSC 242 (591)
Q Consensus 166 GP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~---~~~Ea~aa~~a~~~~~~~pv~vSf~~ 242 (591)
||..++..+ ...++-|.....-+ +.|++-+-|=-|. .++|.+++.+++.+. -|.+
T Consensus 156 Gp~Sas~~~--------~~~V~vetAiaml~-------dmG~~SvKffPM~Gl~~leEl~avAkAca~~-------g~~l 213 (275)
T 3m6y_A 156 GPISAAGEE--------KAIVPIKTAIALVR-------DMGGNSLKYFPMKGLAHEEEYRAVAKACAEE-------GFAL 213 (275)
T ss_dssp STTGGGSSS--------CCEEEHHHHHHHHH-------HHTCCEEEECCCTTTTTHHHHHHHHHHHHHH-------TCEE
T ss_pred CCCccccCC--------CceeeHHHHHHHHH-------HcCCCeeeEeecCCcccHHHHHHHHHHHHHc-------CceE
Q ss_pred cCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC--------CCchhhHHHHHHHHh
Q psy17603 243 KDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC--------VRPLMVSSLIEQLKT 291 (591)
Q Consensus 243 ~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC--------~~p~~i~~~l~~l~~ 291 (591)
+|+|-+ |-+.|+++++.+.+.....+.-==..- +.|+.+..++..+++
T Consensus 214 EPTGGI-dl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 214 EPTGGI-DKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp EEBSSC-CTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHH
T ss_pred CCCCCc-cHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHH
No 266
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=22.31 E-value=2.6e+02 Score=26.34 Aligned_cols=93 Identities=12% Similarity=0.119 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCCEEEecc-----cCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeE
Q psy17603 196 RPRIQALVEAGADILAIET-----IPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLI 270 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ET-----~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~ 270 (591)
.+.++.+.++|+|++-+-- +|++......++.+|+.++.|+-+-+-+.+..+ -+ +.+..+ +++
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~-----~i-~~~~~a------Gad 87 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEK-----YV-EDFAKA------GAD 87 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGG-----TH-HHHHHH------TCS
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHH-----HH-HHHHHc------CCC
Confidence 4566778889999873332 244443345667777766778877776643211 12 222222 334
Q ss_pred EEEecCC--CchhhHHHHHHHHhcCCceEEec
Q psy17603 271 AVGVNCV--RPLMVSSLIEQLKTENIPLVVYP 300 (591)
Q Consensus 271 aiGvNC~--~p~~i~~~l~~l~~~~~~i~~l~ 300 (591)
+|-+-.- ..++....++.++.....++..+
T Consensus 88 gv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 88 IISVHVEHNASPHLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp EEEEECSTTTCTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECcccccchhHHHHHHHHHHcCCcEEEEE
Confidence 4433333 33456666777666544444333
No 267
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=22.19 E-value=1.5e+02 Score=29.53 Aligned_cols=58 Identities=12% Similarity=0.228 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhCCCCeEEEEecCCCchhhHHHHHHHHhcCCceEEecCCCCccceeecccccHHHHHHHHHHhh
Q psy17603 254 FTQVARTCYNMNPDQLIAVGVNCVRPLMVSSLIEQLKTENIPLVVYPNSGEHILAIETIPASKEAQMLCRLLRE 327 (591)
Q Consensus 254 ~~~~~~~~~~~~~~~~~aiGvNC~~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET~~d~~E~~~a~~~~~~ 327 (591)
+.++++.+.+..+. ..-|++.|..++.+...+ ++|+|.+.+.|| ++++++.+++.++.
T Consensus 183 ~~~ai~~~r~~~~~-~~~i~vev~tlee~~~A~--------------~aGaD~I~ld~~-~~~~l~~~v~~l~~ 240 (299)
T 2jbm_A 183 VEKAVRAARQAADF-ALKVEVECSSLQEAVQAA--------------EAGADLVLLDNF-KPEELHPTATVLKA 240 (299)
T ss_dssp HHHHHHHHHHHHTT-TSCEEEEESSHHHHHHHH--------------HTTCSEEEEESC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCc-CCeEEEecCCHHHHHHHH--------------HcCCCEEEECCC-CHHHHHHHHHHhhc
Confidence 45666665442222 123566665554443332 258999999996 47888877777664
No 268
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.13 E-value=5.5e+02 Score=24.96 Aligned_cols=45 Identities=9% Similarity=0.210 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHHHHhcceeecc-ccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMTN-SYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~Tn-Ty~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|.|-|..+ |-+ +. .-++.++-.++++.+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~~ 65 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTG---ES----ATLNHDEHADVVMMTLD 65 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTT---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---ch----hhCCHHHHHHHHHHHHH
Confidence 56788888888899999966543 322 22 13556666666666554
No 269
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=22.07 E-value=82 Score=31.53 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=17.5
Q ss_pred chhHHHHHHHHHcCCcEEE-eecCCcH
Q psy17603 471 EPVDKYVTDWLDEGVALVG-GCCRTYA 496 (591)
Q Consensus 471 e~~a~~~~~~~~~G~~~vg-GCcgttp 496 (591)
+...+.++++++.|+.+|= |+.+|-|
T Consensus 63 ~~a~~~a~~~v~~GAdiIDIGgeStrP 89 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGAHIIDIGGESTRP 89 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC---
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCC
Confidence 3446677888999998887 7767644
No 270
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=22.01 E-value=5.6e+02 Score=24.98 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSV 87 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av 87 (591)
+.+.+++.-+.++++|+|-|.. -|-+ +. .-++.++-.++++.++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~ 66 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTG---EG----CSVGSRERQAILSSFI 66 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT---TG----GGSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch----hhCCHHHHHHHHHHHH
Confidence 5677888888889999996554 3322 21 1355666666655555
No 271
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=21.74 E-value=2.3e+02 Score=28.15 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=29.7
Q ss_pred ceeEeeccCCCCCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEecc
Q psy17603 158 DILIAGSVGPYGASLRDGSEYRGDYVEHVSEATMAEWHRPRIQALVEAGADILAIET 214 (591)
Q Consensus 158 ~~~VagsiGP~ga~l~~g~eY~g~y~~~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET 214 (591)
+++|.|=+=-+..++.||..| . +.+.+. ++++.++++|+|+|=+.-
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~----~---~~~~a~----~~a~~~v~~GAdiIDIGg 84 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY----N---EVDAAV----RHAKEMRDEGAHIIDIGG 84 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH----H---HHHHHH----HHHHHHHHTTCSEEEEES
T ss_pred CCEEEEEEeCCCCccccCCcc----C---CHHHHH----HHHHHHHHcCCCEEEECC
Confidence 467888776666677776432 1 233333 455567789999997764
No 272
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=21.72 E-value=1.9e+02 Score=29.81 Aligned_cols=50 Identities=16% Similarity=0.154 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcC--CCEEEec-----ccCCHHHHHHHHHHHHhcCCCceEEE-EEec
Q psy17603 193 EWHRPRIQALVEAG--ADILAIE-----TIPASKEAQMLCRLLREWPHQKAWLS-FSCK 243 (591)
Q Consensus 193 ~~h~~~i~~l~~aG--vD~i~~E-----T~~~~~Ea~aa~~a~~~~~~~pv~vS-f~~~ 243 (591)
+.+...++.+.+.| +|.|-+. ..|+..+.+.+++.+.. .++|++|| +.+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~-~Gl~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAK-LGLRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHh-cCCeEEEEecccC
Confidence 44556778888888 5999886 45778888888777776 48999997 5553
No 273
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=21.60 E-value=5.6e+02 Score=24.87 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|.|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~~ 65 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTG---EA----TTMTETERKETIKFVID 65 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGG---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch----hhCCHHHHHHHHHHHHH
Confidence 5677888888889999996544 3322 21 13556666666666554
No 274
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=21.48 E-value=6.4e+02 Score=25.99 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEe----cccC----------CHHHHHHHHHHHH-hcCCCceEEEEEecCCCcccCCC
Q psy17603 188 EATMAEWHRPRIQALVEAGADILAI----ETIP----------ASKEAQMLCRLLR-EWPHQKAWLSFSCKDDKHISNGE 252 (591)
Q Consensus 188 ~e~l~~~h~~~i~~l~~aGvD~i~~----ET~~----------~~~Ea~aa~~a~~-~~~~~pv~vSf~~~~~g~l~~G~ 252 (591)
.+.++++=+..++.|.+.|++.-++ |+.. -..-.+++..++| ..++.++++.++...+. .
T Consensus 136 ~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~-----~ 210 (399)
T 1ur4_A 136 KTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETS-----G 210 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTST-----T
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcch-----H
Q ss_pred CHHHHHHHHHhhCCCCeEEEEecCC-----CchhhHHHHHHHHhcCCceEEecCCCCccceeec
Q psy17603 253 SFTQVARTCYNMNPDQLIAVGVNCV-----RPLMVSSLIEQLKTENIPLVVYPNSGEHILAIET 311 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~aiGvNC~-----~p~~i~~~l~~l~~~~~~i~~l~~aG~D~l~iET 311 (591)
.+......+.. ....++.||+|+. ....+...|+.+.+. -|-++++.||
T Consensus 211 ~~~~~~d~l~~-~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~r---------ygKpV~v~Et 264 (399)
T 1ur4_A 211 RYAWIAETLHR-HHVDYDVFASSYYPFWHGTLKNLTSVLTSVADT---------YGKKVMVAET 264 (399)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHH---------HCCEEEEEEE
T ss_pred HHHHHHHHHHH-cCCCcCeEeEecCccchhhHHHHHHHHHHHHHH---------hCCcEEEEEe
No 275
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=21.31 E-value=4.3e+02 Score=25.80 Aligned_cols=35 Identities=26% Similarity=0.106 Sum_probs=20.8
Q ss_pred HHHHHHcCCCEEEeccc-----CCHHHHHHHHHHHHhcCCCceE
Q psy17603 199 IQALVEAGADILAIETI-----PASKEAQMLCRLLREWPHQKAW 237 (591)
Q Consensus 199 i~~l~~aGvD~i~~ET~-----~~~~Ea~aa~~a~~~~~~~pv~ 237 (591)
++.|.++|++.|-+=|- ++....+ .+++..++|++
T Consensus 85 A~~y~~~GA~~IsVltd~~~f~Gs~~~L~----~ir~~v~lPVl 124 (272)
T 3tsm_A 85 AKAYEEGGAACLSVLTDTPSFQGAPEFLT----AARQACSLPAL 124 (272)
T ss_dssp HHHHHHTTCSEEEEECCSTTTCCCHHHHH----HHHHTSSSCEE
T ss_pred HHHHHHCCCCEEEEeccccccCCCHHHHH----HHHHhcCCCEE
Confidence 33445899999977543 3344433 33444578886
No 276
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=21.19 E-value=4.8e+02 Score=26.36 Aligned_cols=68 Identities=3% Similarity=-0.025 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCCC-EEEeccc-----------CCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHH
Q psy17603 195 HRPRIQALVEAGAD-ILAIETI-----------PASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCY 262 (591)
Q Consensus 195 h~~~i~~l~~aGvD-~i~~ET~-----------~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~ 262 (591)
|.+-++.+.++|+| +|-++-- .+.+.+..+++++++..++|++|-++. + .+..+.++.+.
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p--~------~~~~~~a~~~~ 214 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPP--Y------FDIVHFDQAAA 214 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC--C------CCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECC--C------CCHHHHHHHHH
Confidence 33444456667876 9988832 234557778888887677898887743 2 35566666654
Q ss_pred hhCCCCeE
Q psy17603 263 NMNPDQLI 270 (591)
Q Consensus 263 ~~~~~~~~ 270 (591)
.....+++
T Consensus 215 ~aga~~i~ 222 (345)
T 3oix_A 215 IFNXYPLT 222 (345)
T ss_dssp HHTTSCCS
T ss_pred HhCCCceE
Confidence 43334444
No 277
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=21.12 E-value=5e+02 Score=24.10 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=13.5
Q ss_pred HHHHHHHHHcCCCEEEe
Q psy17603 196 RPRIQALVEAGADILAI 212 (591)
Q Consensus 196 ~~~i~~l~~aGvD~i~~ 212 (591)
.+.++.++++|+++|-+
T Consensus 31 ~~~~~al~~gGv~~iel 47 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNV 47 (214)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 46777899999998754
No 278
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.03 E-value=5.9e+02 Score=24.86 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|+|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~~ 71 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTG---ES----ATLSVEEHTAVIEAVVK 71 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc---Cc----ccCCHHHHHHHHHHHHH
Confidence 4678888888889999995544 3322 22 13556666666665554
No 279
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=20.94 E-value=6.1e+02 Score=24.99 Aligned_cols=42 Identities=10% Similarity=-0.054 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecC---CCCHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCC---RTYAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcC---gtgP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++.+.++|++.|.+|= ...|..+.++++.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 4578889999999999999887762 24799999999988765
No 280
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=20.81 E-value=6.7e+02 Score=25.44 Aligned_cols=28 Identities=18% Similarity=0.129 Sum_probs=20.4
Q ss_pred HhcCCcEEeecCCC---CHHHHHHHHHHhhh
Q psy17603 380 LDEGVALVGGCCRT---YAEDTLHMKHRLDD 407 (591)
Q Consensus 380 ~~~Gv~~VGgcCgt---gP~~i~~l~~~l~~ 407 (591)
+..|++.|.+.=+. ||.-+..+.+.+..
T Consensus 317 l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~ 347 (367)
T 3zwt_A 317 IRAGASLVQLYTALTFWGPPVVGKVKRELEA 347 (367)
T ss_dssp HHHTCSEEEESHHHHHHCTHHHHHHHHHHHH
T ss_pred HHcCCCEEEECHHHHhcCcHHHHHHHHHHHH
Confidence 35799999987654 68777777776654
No 281
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=20.75 E-value=2e+02 Score=29.67 Aligned_cols=65 Identities=9% Similarity=0.052 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEecccCCH----HHHHHHHHHHHhc-CCCceEEEEEecCCCcccCCCCHHHHHH
Q psy17603 185 HVSEATMAEWHRPRIQALVEAGADILAIETIPAS----KEAQMLCRLLREW-PHQKAWLSFSCKDDKHISNGESFTQVAR 259 (591)
Q Consensus 185 ~~~~e~l~~~h~~~i~~l~~aGvD~i~~ET~~~~----~Ea~aa~~a~~~~-~~~pv~vSf~~~~~g~l~~G~~~~~~~~ 259 (591)
..+.+.+++.++- .+.+..||.++++.|+.+ .-|+.++++++++ .++|++|.+ .|+..++..+
T Consensus 292 ~a~~~~~~~~~~~---il~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~ 359 (388)
T 2nu8_B 292 GATKERVTEAFKI---ILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAK 359 (388)
T ss_dssp CCCHHHHHHHHHH---HHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHH
T ss_pred CCCHHHHHHHHHH---HhcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHH
Confidence 4577777776652 234578999999887654 3367888888874 468999854 4666666655
Q ss_pred HH
Q psy17603 260 TC 261 (591)
Q Consensus 260 ~~ 261 (591)
.+
T Consensus 360 ~l 361 (388)
T 2nu8_B 360 KL 361 (388)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 282
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=20.57 E-value=3.6e+02 Score=26.66 Aligned_cols=127 Identities=11% Similarity=0.090 Sum_probs=71.8
Q ss_pred ChHHHHHHHHHHHh--cCCcEEeecCCCCHHHHHHHHHHhhhcccCccccccccccCCCCchhhhhhhCCcchhhcchhh
Q psy17603 368 LCEPVDKYVTDWLD--EGVALVGGCCRTYAEDTLHMKHRLDDWVSGLSTYVGDIIDGHPLWSSYFLATAKDAVVQTHRDF 445 (591)
Q Consensus 368 ~~~~~~~~~~~~~~--~Gv~~VGgcCgtgP~~i~~l~~~l~~~~~~~~~~~pd~~~~~plws~~~~~~~P~~~~~~h~~~ 445 (591)
-|..+..+++.+.+ +|+++|=+++..|++.|.++++.+...... ++ ....+++|.. .+|
T Consensus 104 IpnTv~~~a~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kg--v~------------vL~~tSn~g~-----~d~ 164 (290)
T 3r89_A 104 IAASAKMYAKAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKG--VF------------VLLRTSNPGA-----KDF 164 (290)
T ss_dssp CHHHHHHHHHHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCE--EE------------EEEECCSGGG-----GTT
T ss_pred cHHHHHHHHHHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCe--EE------------EEEeCCCCCH-----HHH
Confidence 45677778888776 899999999999999888888766543211 11 0112334432 111
Q ss_pred hhCCCCcccccccCCCCcccccCCcchhHHHHHHHHHc--C---CcEEEeecC-CcHHHHHHHHhccccc---CCCCCCC
Q psy17603 446 IKGSQTNDFLRDYNSPNLWIDRDLCEPVDKYVTDWLDE--G---VALVGGCCR-TYAEDTLHMKHRLDDW---DDKHISN 516 (591)
Q Consensus 446 i~aG~~v~~~~~y~~~~~~l~~~~~e~~a~~~~~~~~~--G---~~~vgGCcg-ttp~~i~~l~~~~~~~---d~~~l~d 516 (591)
...+. .... ..+..++.+.+|... | -..+|==|| |-|++++.+|+.+..- -+|.=.-
T Consensus 165 q~~~~--~~g~------------l~~~V~~~a~~~~~~~~g~~~~g~~GvVvgAT~p~e~~~iR~~~~~~~iL~PGiGaQ 230 (290)
T 3r89_A 165 EVLPV--DGEE------------FFYKVGDKMRELNEKYIGKSGFGPIGLVVGATHSEEVEKIRKRYDKMFFLIPGFGAQ 230 (290)
T ss_dssp TTCEE--TTEE------------THHHHHHHHHHHHGGGCCTTSCEEEEEEECCCCHHHHHHHHHHTTTEEEEECCCCSS
T ss_pred hhccc--CCCC------------HHHHHHHHHHHHhhhccCCCCCCceEEEECCCChHHHHHHHHhCCCCeEEECCcCCC
Confidence 11110 0001 123467777777532 2 236775555 5588888888865321 3444455
Q ss_pred CCcHHHHHHHh
Q psy17603 517 GESFTQVARTC 527 (591)
Q Consensus 517 G~~l~~~~~~~ 527 (591)
|-...++.+.+
T Consensus 231 Gg~~~d~~~~~ 241 (290)
T 3r89_A 231 KADSMNVYKLL 241 (290)
T ss_dssp HHHHHHHHTTC
T ss_pred CCCHHHHHHHH
Confidence 55566666543
No 283
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.51 E-value=6.4e+02 Score=25.11 Aligned_cols=45 Identities=16% Similarity=-0.015 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHhcceeecc-ccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMTN-SYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~Tn-Ty~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|+|-|..+ |-+ +. .-++.++-.++++.+++
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~----~~Ls~eEr~~vi~~~ve 98 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTG---IY----MYLTREERRRAIEAAAT 98 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTT---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch----hhCCHHHHHHHHHHHHH
Confidence 46788888888899999966543 322 22 13556666666666554
No 284
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=20.34 E-value=1.3e+02 Score=29.93 Aligned_cols=23 Identities=22% Similarity=0.512 Sum_probs=12.1
Q ss_pred HHcCCCEEEecccCCHHHHHHHHH
Q psy17603 203 VEAGADILAIETIPASKEAQMLCR 226 (591)
Q Consensus 203 ~~aGvD~i~~ET~~~~~Ea~aa~~ 226 (591)
+++|+|+|.+-+|+ +.+.+.+++
T Consensus 225 ~~aGaD~I~ld~~~-~e~l~~~v~ 247 (296)
T 1qap_A 225 LKAGADIIMLDNFN-TDQMREAVK 247 (296)
T ss_dssp HHTTCSEEEESSCC-HHHHHHHHH
T ss_pred HHcCCCEEEECCCC-HHHHHHHHH
Confidence 45666666666643 444444433
No 285
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=20.34 E-value=5.6e+02 Score=24.34 Aligned_cols=88 Identities=16% Similarity=0.060 Sum_probs=53.0
Q ss_pred HHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHhcCCCceEEEEEecCCCcccCCCCHHHHHHHHHhhCCCCeEEEEecC
Q psy17603 197 PRIQALVEAGADILAIETIPASKEAQMLCRLLREWPHQKAWLSFSCKDDKHISNGESFTQVARTCYNMNPDQLIAVGVNC 276 (591)
Q Consensus 197 ~~i~~l~~aGvD~i~~ET~~~~~Ea~aa~~a~~~~~~~pv~vSf~~~~~g~l~~G~~~~~~~~~~~~~~~~~~~aiGvNC 276 (591)
++++..+++|+|++.. |...+ .+++++++. +.|++... .++.|+...+. .+++.|.+==
T Consensus 97 ~~a~~Ai~AGA~fIvs---P~~~~--~vi~~~~~~-gi~~ipGv-----------~TptEi~~A~~----~Gad~vK~FP 155 (232)
T 4e38_A 97 EQALAAKEAGATFVVS---PGFNP--NTVRACQEI-GIDIVPGV-----------NNPSTVEAALE----MGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHTCSEEEC---SSCCH--HHHHHHHHH-TCEEECEE-----------CSHHHHHHHHH----TTCCEEEECS
T ss_pred HHHHHHHHcCCCEEEe---CCCCH--HHHHHHHHc-CCCEEcCC-----------CCHHHHHHHHH----cCCCEEEECc
Confidence 5667778899999985 33322 233445543 67766432 36778877762 4667777632
Q ss_pred CCchhhHHHHHHHHhcCCceEEecCCCCc
Q psy17603 277 VRPLMVSSLIEQLKTENIPLVVYPNSGEH 305 (591)
Q Consensus 277 ~~p~~i~~~l~~l~~~~~~i~~l~~aG~D 305 (591)
..+..=...++.++...-++...+.+|++
T Consensus 156 a~~~gG~~~lkal~~p~p~ip~~ptGGI~ 184 (232)
T 4e38_A 156 AEASGGISMVKSLVGPYGDIRLMPTGGIT 184 (232)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEEEBSSCC
T ss_pred CccccCHHHHHHHHHHhcCCCeeeEcCCC
Confidence 21111135677776644467888889985
No 286
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=20.15 E-value=7.5e+02 Score=25.74 Aligned_cols=42 Identities=12% Similarity=-0.050 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHHHhcCCcEEeecCC---CCHHHHHHHHHHhhhc
Q psy17603 367 DLCEPVDKYVTDWLDEGVALVGGCCR---TYAEDTLHMKHRLDDW 408 (591)
Q Consensus 367 ~~~~~~~~~~~~~~~~Gv~~VGgcCg---tgP~~i~~l~~~l~~~ 408 (591)
.+++.+.+.++.+.++|++.|.+|=. ..|..+..+++.++..
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhh
Confidence 45678888888889999999877643 3799999999888764
No 287
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=20.14 E-value=6e+02 Score=24.65 Aligned_cols=45 Identities=13% Similarity=0.176 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHHhcceeec-cccccChhchhhhcCCChHHHHHHHHHHHH
Q psy17603 37 AKDAVVQTHRDFIKAGADIVMT-NSYQASIGGFMEFLDLDYDSSYQLIKSSVD 88 (591)
Q Consensus 37 ~Pe~v~~vH~~yl~AGAdiI~T-nTy~as~~~l~~~~g~~~~~~~~l~~~av~ 88 (591)
+.+.+++.-+.++++|+|-|.. -|-+ +. .-++.++-.++++.+++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~----~~Ls~~Er~~v~~~~~~ 65 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTG---EA----STLSMEEHTQVIKEIIR 65 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTT---TG----GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc---cc----ccCCHHHHHHHHHHHHH
Confidence 4678888888889999995543 3322 22 13556666666655554
No 288
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=20.11 E-value=3.7e+02 Score=26.63 Aligned_cols=28 Identities=29% Similarity=0.291 Sum_probs=20.4
Q ss_pred hccCHHHHHHHHHHHHHHhcceeeccc-cc
Q psy17603 34 LATAKDAVVQTHRDFIKAGADIVMTNS-YQ 62 (591)
Q Consensus 34 l~~~Pe~v~~vH~~yl~AGAdiI~TnT-y~ 62 (591)
.++..+ +.+.-+-=.+||||.|-|.| |.
T Consensus 184 ~Lt~ee-i~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 184 QLTADE-IIAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp GCCHHH-HHHHHHHHHHTTCSEEECCCSSS
T ss_pred CCCHHH-HHHHHHHHHHcCCCEEEcCCCCC
Confidence 344444 55566777899999999998 75
Done!