Query psy17610
Match_columns 515
No_of_seqs 1121 out of 3534
Neff 11.9
Searched_HMMs 29240
Date Fri Aug 16 18:30:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 3.2E-67 1.1E-71 517.7 59.9 483 1-513 24-609 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 4.8E-65 1.7E-69 502.0 65.0 476 1-512 63-577 (577)
3 2ymu_A WD-40 repeat protein; u 100.0 1.2E-64 4.1E-69 499.1 63.8 473 1-513 22-537 (577)
4 1nr0_A Actin interacting prote 100.0 2.4E-63 8.4E-68 490.0 55.6 427 54-513 38-565 (611)
5 3sfz_A APAF-1, apoptotic pepti 100.0 4.8E-61 1.7E-65 513.9 49.1 490 1-514 621-1248(1249)
6 1pgu_A Actin interacting prote 100.0 4.3E-59 1.5E-63 463.5 58.4 441 1-513 24-612 (615)
7 2oaj_A Protein SNI1; WD40 repe 100.0 6.7E-58 2.3E-62 466.5 49.3 461 1-513 23-659 (902)
8 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-56 1.1E-60 476.7 51.6 439 72-513 606-1156(1249)
9 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-55 1.6E-59 445.5 53.3 422 74-513 10-603 (902)
10 1pgu_A Actin interacting prote 100.0 4.4E-55 1.5E-59 434.6 50.6 425 79-513 16-570 (615)
11 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-52 4E-57 430.6 51.2 426 1-511 19-501 (814)
12 3mkq_A Coatomer beta'-subunit; 100.0 3.4E-51 1.2E-55 419.8 45.8 399 75-513 7-458 (814)
13 3ow8_A WD repeat-containing pr 100.0 2.1E-48 7.3E-53 351.7 43.4 286 206-513 29-319 (321)
14 1vyh_C Platelet-activating fac 100.0 1.7E-48 5.7E-53 365.2 40.3 288 117-408 101-409 (410)
15 1vyh_C Platelet-activating fac 100.0 3.8E-48 1.3E-52 362.8 40.6 288 75-367 102-410 (410)
16 3ow8_A WD repeat-containing pr 100.0 8.1E-48 2.8E-52 347.9 41.1 290 74-367 25-320 (321)
17 1got_B GT-beta; complex (GTP-b 100.0 3.3E-47 1.1E-51 347.7 45.3 287 73-365 47-340 (340)
18 1got_B GT-beta; complex (GTP-b 100.0 7.1E-47 2.4E-51 345.5 43.8 289 115-407 46-340 (340)
19 1r5m_A SIR4-interacting protei 100.0 3.5E-47 1.2E-51 360.2 41.6 331 72-409 36-424 (425)
20 2ynn_A Coatomer subunit beta'; 100.0 8.2E-47 2.8E-51 339.3 41.5 292 115-410 4-302 (304)
21 1r5m_A SIR4-interacting protei 100.0 3.5E-47 1.2E-51 360.2 39.7 342 146-513 25-423 (425)
22 2pbi_B Guanine nucleotide-bind 100.0 6.7E-46 2.3E-50 340.4 44.5 288 73-365 56-354 (354)
23 3frx_A Guanine nucleotide-bind 100.0 6.1E-46 2.1E-50 335.9 43.4 291 74-369 10-318 (319)
24 2ynn_A Coatomer subunit beta'; 100.0 9E-46 3.1E-50 332.6 42.8 290 75-368 7-302 (304)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-46 1.8E-50 340.2 41.8 300 75-375 9-342 (345)
26 1gxr_A ESG1, transducin-like e 100.0 2.8E-46 9.6E-51 342.5 39.7 321 80-408 8-335 (337)
27 2pbi_B Guanine nucleotide-bind 100.0 7.8E-46 2.7E-50 340.0 41.8 289 116-407 56-354 (354)
28 4ery_A WD repeat-containing pr 100.0 1.4E-44 4.9E-49 326.9 45.0 293 114-409 13-311 (312)
29 3frx_A Guanine nucleotide-bind 100.0 7.3E-45 2.5E-49 328.9 42.4 289 115-410 8-317 (319)
30 4g56_B MGC81050 protein; prote 100.0 2.5E-46 8.4E-51 343.5 32.9 310 47-370 18-345 (357)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-45 1.5E-49 334.3 40.7 297 115-412 6-337 (345)
32 3iz6_a 40S ribosomal protein R 100.0 3.2E-46 1.1E-50 346.5 32.9 296 73-370 58-377 (380)
33 1gxr_A ESG1, transducin-like e 100.0 3.9E-45 1.3E-49 334.9 39.7 323 123-470 8-335 (337)
34 4g56_B MGC81050 protein; prote 100.0 5.7E-46 2E-50 341.1 33.9 315 86-411 10-344 (357)
35 4gqb_B Methylosome protein 50; 100.0 2E-45 6.8E-50 334.4 36.3 296 105-411 16-332 (344)
36 1erj_A Transcriptional repress 100.0 1E-44 3.4E-49 338.1 41.5 301 74-410 57-389 (393)
37 2hes_X YDR267CP; beta-propelle 100.0 2.3E-44 7.8E-49 327.3 42.3 290 75-368 8-328 (330)
38 2xzm_R RACK1; ribosome, transl 100.0 1.6E-44 5.6E-49 330.4 41.4 293 74-370 14-342 (343)
39 3iz6_a 40S ribosomal protein R 100.0 3.5E-46 1.2E-50 346.2 30.7 304 105-411 48-376 (380)
40 4ery_A WD repeat-containing pr 100.0 6.8E-44 2.3E-48 322.4 44.9 292 72-367 14-311 (312)
41 2pm9_A Protein WEB1, protein t 100.0 2.7E-47 9.1E-52 359.9 22.8 327 80-410 11-414 (416)
42 2pm9_A Protein WEB1, protein t 100.0 1.5E-46 5E-51 354.8 26.6 347 123-473 11-415 (416)
43 2xzm_R RACK1; ribosome, transl 100.0 2.9E-44 1E-48 328.8 40.2 290 116-410 13-340 (343)
44 4gqb_B Methylosome protein 50; 100.0 8.3E-45 2.9E-49 330.3 35.8 286 79-369 28-332 (344)
45 3vl1_A 26S proteasome regulato 100.0 2E-45 6.7E-50 347.5 32.6 352 84-472 59-419 (420)
46 3vl1_A 26S proteasome regulato 100.0 1.8E-44 6E-49 340.9 37.5 340 1-410 62-419 (420)
47 4aow_A Guanine nucleotide-bind 100.0 8.3E-43 2.8E-47 319.8 45.1 293 75-370 32-339 (340)
48 1erj_A Transcriptional repress 100.0 3.5E-43 1.2E-47 327.6 42.9 294 207-514 62-388 (393)
49 2hes_X YDR267CP; beta-propelle 100.0 2E-43 6.9E-48 321.0 39.6 292 115-410 5-328 (330)
50 2j04_B YDR362CP, TAU91; beta p 100.0 2.7E-45 9.2E-50 349.7 26.0 351 75-513 127-515 (524)
51 3zwl_B Eukaryotic translation 100.0 1.9E-42 6.4E-47 321.3 42.8 300 69-373 20-351 (369)
52 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-41 3.6E-46 323.9 47.3 319 75-411 112-443 (445)
53 4aow_A Guanine nucleotide-bind 100.0 6.1E-42 2.1E-46 314.0 43.8 303 105-412 18-339 (340)
54 3gre_A Serine/threonine-protei 100.0 2E-43 6.9E-48 335.3 31.7 360 74-512 55-437 (437)
55 3zwl_B Eukaryotic translation 100.0 2.6E-41 8.8E-46 313.6 44.1 291 117-411 25-347 (369)
56 3dm0_A Maltose-binding peripla 100.0 7.5E-42 2.6E-46 342.8 43.6 290 75-367 376-692 (694)
57 3v7d_B Cell division control p 100.0 5.3E-41 1.8E-45 321.3 47.1 320 73-406 113-459 (464)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.1E-41 1E-45 320.7 45.0 325 155-514 107-441 (445)
59 3v7d_B Cell division control p 100.0 6E-41 2.1E-45 320.9 46.7 321 158-512 113-460 (464)
60 1sq9_A Antiviral protein SKI8; 100.0 8.6E-42 3E-46 320.0 39.2 291 116-411 8-396 (397)
61 3odt_A Protein DOA1; ubiquitin 100.0 6.9E-41 2.3E-45 303.3 40.7 290 109-412 3-298 (313)
62 3ei3_B DNA damage-binding prot 100.0 4E-41 1.4E-45 313.7 38.3 310 193-513 58-380 (383)
63 1sq9_A Antiviral protein SKI8; 100.0 1.7E-41 5.8E-46 318.0 36.0 292 74-370 9-397 (397)
64 3ei3_B DNA damage-binding prot 100.0 2.7E-41 9.2E-46 314.8 36.9 295 108-410 58-382 (383)
65 3i2n_A WD repeat-containing pr 100.0 1.5E-41 5E-46 313.8 34.6 295 114-411 8-354 (357)
66 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-41 1.3E-45 312.9 36.5 291 120-412 4-363 (372)
67 3dm0_A Maltose-binding peripla 100.0 9.9E-41 3.4E-45 334.6 41.8 290 116-409 374-692 (694)
68 3k26_A Polycomb protein EED; W 100.0 1.6E-41 5.6E-46 314.6 32.6 287 117-409 11-365 (366)
69 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-41 8.4E-46 314.1 33.2 317 162-513 4-359 (372)
70 2j04_A TAU60, YPL007P, hypothe 100.0 6.1E-43 2.1E-47 323.7 21.6 317 121-504 12-350 (588)
71 3i2n_A WD repeat-containing pr 100.0 6.8E-41 2.3E-45 309.3 34.7 293 74-371 11-356 (357)
72 4a11_B DNA excision repair pro 100.0 1.1E-40 3.6E-45 313.9 35.8 331 74-410 36-405 (408)
73 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-39 4.3E-44 294.9 41.5 287 73-374 10-302 (313)
74 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-42 1.1E-46 328.4 24.7 315 89-411 169-518 (524)
75 4gga_A P55CDC, cell division c 100.0 8.2E-40 2.8E-44 308.0 39.8 297 83-384 107-411 (420)
76 4aez_A CDC20, WD repeat-contai 100.0 7.2E-40 2.5E-44 306.6 38.7 293 75-375 85-387 (401)
77 4e54_B DNA damage-binding prot 100.0 2.2E-41 7.7E-46 320.1 28.2 293 76-371 114-433 (435)
78 4h5i_A Guanine nucleotide-exch 100.0 1.6E-40 5.6E-45 305.6 32.6 289 80-411 13-344 (365)
79 3k26_A Polycomb protein EED; W 100.0 3.5E-40 1.2E-44 305.6 34.9 304 201-514 10-365 (366)
80 3dwl_C Actin-related protein 2 100.0 4E-42 1.4E-46 319.9 21.5 321 79-408 9-377 (377)
81 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-42 1.1E-46 318.9 19.7 316 80-461 14-350 (588)
82 4a11_B DNA excision repair pro 100.0 9.6E-40 3.3E-44 307.4 36.7 309 187-513 22-363 (408)
83 4e54_B DNA damage-binding prot 100.0 5.9E-41 2E-45 317.2 27.1 302 206-513 116-428 (435)
84 3dwl_C Actin-related protein 2 100.0 1.6E-41 5.5E-46 315.8 22.9 338 161-513 6-377 (377)
85 4aez_A CDC20, WD repeat-contai 100.0 8.8E-39 3E-43 299.2 38.7 283 122-412 89-382 (401)
86 4gga_A P55CDC, cell division c 100.0 7.9E-39 2.7E-43 301.3 38.4 279 126-412 107-397 (420)
87 4ggc_A P55CDC, cell division c 100.0 2.9E-38 1E-42 286.7 39.9 282 84-370 28-317 (318)
88 2pm7_B Protein transport prote 100.0 6.9E-39 2.4E-43 286.7 33.0 249 76-325 4-285 (297)
89 4h5i_A Guanine nucleotide-exch 100.0 9.1E-39 3.1E-43 294.0 34.4 287 165-473 13-344 (365)
90 4ggc_A P55CDC, cell division c 100.0 5.5E-38 1.9E-42 284.9 38.4 277 127-411 28-316 (318)
91 1k32_A Tricorn protease; prote 100.0 2.7E-37 9.1E-42 322.9 46.0 375 121-513 200-635 (1045)
92 3gre_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 309.4 25.1 342 1-407 69-437 (437)
93 3dw8_B Serine/threonine-protei 100.0 9.6E-39 3.3E-43 304.3 31.4 285 79-366 26-444 (447)
94 1yfq_A Cell cycle arrest prote 100.0 4.6E-38 1.6E-42 288.5 34.5 283 118-408 5-322 (342)
95 3dw8_B Serine/threonine-protei 100.0 1.2E-38 4.2E-43 303.6 31.7 282 123-408 27-444 (447)
96 3bg1_A Protein SEC13 homolog; 100.0 6.7E-39 2.3E-43 289.3 27.8 250 75-324 7-292 (316)
97 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-38 8E-43 291.4 31.8 298 76-374 6-343 (351)
98 2pm7_B Protein transport prote 100.0 6.7E-38 2.3E-42 280.3 32.9 249 160-410 3-285 (297)
99 1yfq_A Cell cycle arrest prote 100.0 3.1E-38 1.1E-42 289.6 31.2 279 79-365 9-321 (342)
100 1p22_A F-BOX/WD-repeat protein 100.0 7.4E-37 2.5E-41 289.4 37.1 276 121-412 130-416 (435)
101 3mmy_A MRNA export factor; mRN 100.0 5.1E-37 1.8E-41 284.5 35.0 309 193-512 24-343 (368)
102 3mmy_A MRNA export factor; mRN 100.0 2.7E-37 9.3E-42 286.4 32.8 285 76-366 34-344 (368)
103 1k32_A Tricorn protease; prote 100.0 5.1E-36 1.7E-40 313.2 46.0 400 74-512 45-499 (1045)
104 3jrp_A Fusion protein of prote 100.0 5E-37 1.7E-41 285.8 34.3 255 76-331 6-293 (379)
105 1p22_A F-BOX/WD-repeat protein 100.0 4.9E-37 1.7E-41 290.7 34.4 292 78-388 130-433 (435)
106 3bws_A Protein LP49; two-domai 100.0 1.4E-35 4.6E-40 281.2 43.3 369 79-513 25-430 (433)
107 3bg1_A Protein SEC13 homolog; 100.0 7.8E-38 2.7E-42 282.4 25.8 250 116-367 5-292 (316)
108 3jrp_A Fusion protein of prote 100.0 3.2E-37 1.1E-41 287.1 29.0 253 156-410 1-287 (379)
109 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-36 3.7E-41 280.2 30.4 294 117-412 4-339 (351)
110 1l0q_A Surface layer protein; 100.0 1.6E-34 5.6E-39 269.9 44.9 308 94-411 3-343 (391)
111 3bws_A Protein LP49; two-domai 100.0 7.1E-35 2.4E-39 276.3 41.8 323 80-410 59-432 (433)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-36 5.4E-41 284.3 27.5 285 82-370 35-344 (402)
113 2aq5_A Coronin-1A; WD40 repeat 100.0 5.9E-36 2E-40 280.4 30.6 250 77-328 77-345 (402)
114 1l0q_A Surface layer protein; 100.0 1.5E-33 5.1E-38 263.4 44.2 347 138-506 4-372 (391)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.8E-35 2.7E-39 276.7 36.0 284 124-411 4-392 (450)
116 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-34 3.7E-39 266.1 35.1 288 192-514 3-335 (355)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-34 3.9E-39 275.6 35.6 279 82-367 5-390 (450)
118 3vu4_A KMHSV2; beta-propeller 100.0 3.6E-35 1.2E-39 269.3 30.6 309 150-473 3-337 (355)
119 3jro_A Fusion protein of prote 100.0 1.2E-35 4E-40 299.2 29.0 255 118-411 3-286 (753)
120 3jro_A Fusion protein of prote 100.0 2.5E-36 8.5E-41 304.1 21.4 251 76-327 4-287 (753)
121 3lrv_A PRE-mRNA-splicing facto 100.0 1E-34 3.4E-39 265.6 30.2 277 173-513 43-331 (343)
122 3lrv_A PRE-mRNA-splicing facto 100.0 7.1E-35 2.4E-39 266.7 26.9 275 88-408 43-331 (343)
123 4gq1_A NUP37; propeller, trans 100.0 1.8E-34 6E-39 268.6 29.7 345 78-514 12-388 (393)
124 2xyi_A Probable histone-bindin 100.0 7.7E-34 2.6E-38 267.9 34.1 311 55-411 23-411 (430)
125 2w18_A PALB2, fancn, partner a 100.0 4.8E-33 1.7E-37 241.8 35.5 281 84-408 42-355 (356)
126 2w18_A PALB2, fancn, partner a 100.0 2.7E-33 9.2E-38 243.4 29.8 283 169-513 42-355 (356)
127 2xyi_A Probable histone-bindin 100.0 5.1E-33 1.7E-37 262.3 34.4 246 247-513 122-408 (430)
128 1nir_A Nitrite reductase; hemo 100.0 1.6E-32 5.4E-37 264.1 37.9 336 131-483 144-525 (543)
129 1nir_A Nitrite reductase; hemo 100.0 8.8E-32 3E-36 259.0 40.8 319 88-412 144-516 (543)
130 4gq1_A NUP37; propeller, trans 100.0 1.8E-33 6.1E-38 261.8 24.0 263 77-366 85-387 (393)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.8E-31 9.4E-36 248.3 29.5 301 82-392 63-410 (415)
132 2ecf_A Dipeptidyl peptidase IV 100.0 2E-30 6.8E-35 262.7 31.8 322 81-410 36-459 (741)
133 2hqs_A Protein TOLB; TOLB, PAL 100.0 8.6E-30 2.9E-34 238.2 29.3 302 123-454 61-410 (415)
134 2ecf_A Dipeptidyl peptidase IV 100.0 1.5E-29 5E-34 256.4 32.4 322 124-473 36-460 (741)
135 1xfd_A DIP, dipeptidyl aminope 100.0 7.7E-30 2.6E-34 257.8 27.9 363 82-475 17-446 (723)
136 2z3z_A Dipeptidyl aminopeptida 100.0 1.8E-28 6.2E-33 246.9 34.7 317 127-474 28-437 (706)
137 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-27 3.7E-32 241.2 32.3 316 84-412 28-437 (706)
138 1xfd_A DIP, dipeptidyl aminope 100.0 6.3E-29 2.1E-33 251.1 22.9 348 125-503 17-428 (723)
139 1ri6_A Putative isomerase YBHE 100.0 1.1E-26 3.7E-31 212.8 34.8 297 181-497 8-335 (343)
140 3u4y_A Uncharacterized protein 100.0 1.9E-26 6.7E-31 209.9 35.1 280 87-370 3-306 (331)
141 3vgz_A Uncharacterized protein 100.0 6.2E-26 2.1E-30 208.6 38.2 273 79-359 38-335 (353)
142 1ri6_A Putative isomerase YBHE 100.0 2.3E-26 7.7E-31 210.7 34.9 270 76-349 32-334 (343)
143 3u4y_A Uncharacterized protein 100.0 9.1E-26 3.1E-30 205.5 34.4 275 130-411 3-305 (331)
144 3vgz_A Uncharacterized protein 100.0 4.7E-25 1.6E-29 202.8 37.8 272 123-401 39-335 (353)
145 1pby_B Quinohemoprotein amine 100.0 1E-25 3.5E-30 205.8 31.0 272 94-378 2-320 (337)
146 1pby_B Quinohemoprotein amine 100.0 1.4E-25 4.6E-30 205.0 31.4 244 83-335 35-320 (337)
147 2ojh_A Uncharacterized protein 99.9 4.7E-26 1.6E-30 203.9 24.5 254 143-401 19-293 (297)
148 3hfq_A Uncharacterized protein 99.9 1.5E-23 5.1E-28 192.1 35.8 276 95-372 4-323 (347)
149 2ojh_A Uncharacterized protein 99.9 7E-25 2.4E-29 196.3 25.5 255 184-463 18-293 (297)
150 3hfq_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 189.8 36.9 272 187-476 15-323 (347)
151 1z68_A Fibroblast activation p 99.9 2.5E-25 8.7E-30 224.4 22.1 318 86-412 20-445 (719)
152 1jmx_B Amine dehydrogenase; ox 99.9 4.9E-24 1.7E-28 195.6 27.8 277 129-412 4-327 (349)
153 4a5s_A Dipeptidyl peptidase 4 99.9 5.8E-24 2E-28 214.2 30.6 369 82-480 17-457 (740)
154 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-23 3.8E-28 193.3 30.0 274 86-378 4-335 (349)
155 3scy_A Hypothetical bacterial 99.9 5.4E-23 1.8E-27 189.4 34.6 296 178-493 13-360 (361)
156 3scy_A Hypothetical bacterial 99.9 6.8E-23 2.3E-27 188.8 34.2 294 90-388 10-360 (361)
157 1z68_A Fibroblast activation p 99.9 1.1E-24 3.8E-29 219.7 24.2 333 128-480 19-451 (719)
158 3o4h_A Acylamino-acid-releasin 99.9 3.9E-24 1.3E-28 210.0 27.0 271 166-472 21-315 (582)
159 3o4h_A Acylamino-acid-releasin 99.9 6.8E-24 2.3E-28 208.3 24.2 270 123-410 20-315 (582)
160 4a5s_A Dipeptidyl peptidase 4 99.9 1.1E-22 3.7E-27 205.0 30.7 345 125-503 17-434 (740)
161 2oiz_A Aromatic amine dehydrog 99.9 7.3E-22 2.5E-26 180.6 31.4 289 92-392 14-360 (361)
162 3pe7_A Oligogalacturonate lyas 99.9 7.4E-22 2.5E-26 183.9 29.9 286 73-366 22-380 (388)
163 3pe7_A Oligogalacturonate lyas 99.9 1.1E-21 3.8E-26 182.7 30.8 300 191-513 13-380 (388)
164 2oit_A Nucleoporin 214KDA; NH2 99.9 2.3E-22 8E-27 188.3 23.1 163 78-241 89-279 (434)
165 1jof_A Carboxy-CIS,CIS-muconat 99.9 7E-21 2.4E-25 175.2 32.4 246 80-326 38-342 (365)
166 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.8E-21 9.4E-26 177.9 29.1 281 223-513 4-339 (365)
167 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-21 4.7E-26 183.1 27.2 238 81-323 36-331 (434)
168 3c5m_A Oligogalacturonate lyas 99.9 2.7E-22 9.1E-27 187.5 20.3 329 106-476 13-388 (396)
169 2oiz_A Aromatic amine dehydrog 99.9 3.2E-20 1.1E-24 169.7 32.3 259 86-350 54-360 (361)
170 1qks_A Cytochrome CD1 nitrite 99.9 1.8E-18 6.3E-23 165.7 41.9 318 90-412 164-540 (567)
171 3c5m_A Oligogalacturonate lyas 99.9 3.4E-21 1.2E-25 180.0 22.0 280 84-371 38-387 (396)
172 1qks_A Cytochrome CD1 nitrite 99.9 6.6E-18 2.2E-22 161.9 43.4 293 80-377 195-547 (567)
173 3azo_A Aminopeptidase; POP fam 99.9 2.7E-20 9.2E-25 185.9 26.0 326 77-408 19-409 (662)
174 3azo_A Aminopeptidase; POP fam 99.9 7.2E-20 2.5E-24 182.8 26.8 286 120-411 19-370 (662)
175 2dg1_A DRP35, lactonase; beta 99.8 1.5E-18 5.1E-23 157.8 29.8 272 125-401 6-301 (333)
176 2gop_A Trilobed protease; beta 99.8 4.6E-18 1.6E-22 155.6 32.6 268 82-380 15-341 (347)
177 3fvz_A Peptidyl-glycine alpha- 99.8 3.4E-18 1.2E-22 154.6 30.1 241 167-410 24-322 (329)
178 1q7f_A NHL, brain tumor CG1071 99.8 1.3E-17 4.4E-22 148.0 33.0 240 122-369 27-281 (286)
179 1q7f_A NHL, brain tumor CG1071 99.8 1.8E-17 6.1E-22 147.1 33.0 239 80-326 28-281 (286)
180 2z2n_A Virginiamycin B lyase; 99.8 2.5E-16 8.5E-21 140.7 40.6 283 75-369 8-296 (299)
181 3fvz_A Peptidyl-glycine alpha- 99.8 4.2E-18 1.4E-22 154.1 28.6 242 81-325 23-322 (329)
182 2gop_A Trilobed protease; beta 99.8 1.1E-17 3.8E-22 153.0 31.2 257 210-513 15-329 (347)
183 3sjl_D Methylamine dehydrogena 99.8 4.8E-17 1.6E-21 145.9 33.0 256 87-348 83-384 (386)
184 2dg1_A DRP35, lactonase; beta 99.8 1.7E-17 5.7E-22 150.8 29.2 270 81-358 5-300 (333)
185 3dsm_A Uncharacterized protein 99.8 1.9E-16 6.5E-21 142.8 34.0 276 186-492 15-319 (328)
186 3e5z_A Putative gluconolactona 99.8 1.1E-16 3.9E-21 142.6 32.1 243 76-328 22-289 (296)
187 2z2n_A Virginiamycin B lyase; 99.8 2.2E-15 7.6E-20 134.5 40.3 279 122-410 12-295 (299)
188 3sjl_D Methylamine dehydrogena 99.8 1E-16 3.6E-21 143.7 31.1 292 87-390 38-384 (386)
189 2xdw_A Prolyl endopeptidase; a 99.8 8.5E-17 2.9E-21 161.4 34.2 276 91-370 81-416 (710)
190 2mad_H Methylamine dehydrogena 99.8 4.3E-15 1.5E-19 135.6 40.1 276 88-375 27-357 (373)
191 2xdw_A Prolyl endopeptidase; a 99.8 1.3E-16 4.5E-21 160.1 32.7 276 134-412 81-416 (710)
192 3e5z_A Putative gluconolactona 99.8 2E-16 7E-21 140.9 30.4 245 156-410 17-286 (296)
193 3no2_A Uncharacterized protein 99.8 1.3E-16 4.5E-21 139.4 27.9 214 136-356 5-231 (276)
194 3dsm_A Uncharacterized protein 99.8 1.2E-16 3.9E-21 144.3 27.9 275 101-387 15-319 (328)
195 2qc5_A Streptogramin B lactona 99.8 7.8E-15 2.7E-19 131.0 38.7 279 77-366 15-298 (300)
196 2mad_H Methylamine dehydrogena 99.8 6.8E-15 2.3E-19 134.3 38.3 241 86-332 70-357 (373)
197 2bkl_A Prolyl endopeptidase; m 99.8 3.7E-17 1.2E-21 163.6 24.9 274 133-412 76-399 (695)
198 2bkl_A Prolyl endopeptidase; m 99.8 2.6E-17 8.8E-22 164.7 21.7 274 90-371 76-400 (695)
199 3no2_A Uncharacterized protein 99.8 1.6E-15 5.3E-20 132.6 28.6 214 264-503 4-231 (276)
200 3c75_H MADH, methylamine dehyd 99.8 3.3E-15 1.1E-19 136.7 31.7 243 86-332 122-409 (426)
201 2qc5_A Streptogramin B lactona 99.8 3.6E-14 1.2E-18 126.7 38.3 275 123-408 18-298 (300)
202 3c75_H MADH, methylamine dehyd 99.7 2.3E-15 7.8E-20 137.7 28.8 275 91-375 82-409 (426)
203 1yr2_A Prolyl oligopeptidase; 99.7 3E-15 1E-19 150.7 31.5 277 90-371 115-444 (741)
204 1rwi_B Serine/threonine-protei 99.7 7.7E-16 2.6E-20 135.3 23.4 240 83-328 25-267 (270)
205 1rwi_B Serine/threonine-protei 99.7 1.6E-15 5.4E-20 133.3 25.3 240 168-412 25-266 (270)
206 1yr2_A Prolyl oligopeptidase; 99.7 1.5E-15 5.1E-20 153.0 27.1 275 133-412 115-443 (741)
207 4a2l_A BT_4663, two-component 99.7 7.8E-12 2.7E-16 127.1 54.1 398 84-512 175-611 (795)
208 4a2l_A BT_4663, two-component 99.7 4.7E-12 1.6E-16 128.7 51.1 398 84-512 133-568 (795)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.2E-13 4.1E-18 124.2 29.3 240 168-410 19-299 (314)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.7E-13 5.7E-18 123.3 29.3 242 79-325 15-299 (314)
211 3q7m_A Lipoprotein YFGL, BAMB; 99.6 5.5E-13 1.9E-17 123.1 31.2 302 92-407 52-375 (376)
212 3g4e_A Regucalcin; six bladed 99.6 1.4E-12 4.8E-17 115.8 32.3 235 252-503 11-260 (297)
213 3hrp_A Uncharacterized protein 99.6 6.1E-13 2.1E-17 123.2 30.6 235 82-323 131-408 (409)
214 3v9f_A Two-component system se 99.6 2.1E-10 7.3E-15 116.3 51.9 394 82-506 163-603 (781)
215 1yiq_A Quinohemoprotein alcoho 99.6 3.1E-13 1.1E-17 133.7 28.7 261 93-354 121-534 (689)
216 1kb0_A Quinohemoprotein alcoho 99.6 3.9E-13 1.3E-17 132.7 29.2 313 93-410 77-567 (677)
217 3v9f_A Two-component system se 99.6 1.4E-09 4.7E-14 110.4 55.5 397 81-509 210-651 (781)
218 3hrp_A Uncharacterized protein 99.6 1.9E-12 6.7E-17 119.9 31.5 235 168-408 132-408 (409)
219 1kb0_A Quinohemoprotein alcoho 99.6 8.8E-13 3E-17 130.1 30.5 261 92-354 127-536 (677)
220 3g4e_A Regucalcin; six bladed 99.6 6.2E-12 2.1E-16 111.7 33.2 227 80-314 11-261 (297)
221 1yiq_A Quinohemoprotein alcoho 99.6 5.5E-13 1.9E-17 131.9 28.4 300 92-396 69-534 (689)
222 1xip_A Nucleoporin NUP159; bet 99.6 4.3E-14 1.5E-18 127.4 18.4 176 83-272 39-232 (388)
223 1mda_H Methylamine dehydrogena 99.6 2.3E-13 7.9E-18 122.5 23.1 267 104-389 47-366 (368)
224 3dr2_A Exported gluconolactona 99.6 2.5E-12 8.4E-17 114.8 27.8 237 157-402 35-299 (305)
225 2qe8_A Uncharacterized protein 99.6 3.8E-13 1.3E-17 122.1 22.7 271 210-506 17-312 (343)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.6 1.5E-11 5E-16 113.5 33.6 301 177-512 52-375 (376)
227 3dr2_A Exported gluconolactona 99.6 2.3E-12 7.8E-17 115.0 27.0 235 250-510 41-302 (305)
228 2qe8_A Uncharacterized protein 99.6 6.7E-13 2.3E-17 120.5 22.7 262 82-361 17-314 (343)
229 1mda_H Methylamine dehydrogena 99.6 1.4E-12 4.9E-17 117.4 24.1 248 86-347 69-366 (368)
230 2ghs_A AGR_C_1268P; regucalcin 99.5 2E-11 6.8E-16 109.8 30.8 222 170-400 52-292 (326)
231 3iuj_A Prolyl endopeptidase; h 99.5 2E-12 6.9E-17 128.9 25.9 243 122-371 126-408 (693)
232 2ghs_A AGR_C_1268P; regucalcin 99.5 3.4E-11 1.2E-15 108.3 31.5 223 83-315 50-292 (326)
233 3iuj_A Prolyl endopeptidase; h 99.5 1E-12 3.5E-17 131.0 23.6 241 80-328 127-408 (693)
234 3hxj_A Pyrrolo-quinoline quino 99.5 1.3E-12 4.4E-17 118.3 20.2 299 87-410 25-324 (330)
235 1xip_A Nucleoporin NUP159; bet 99.5 1.7E-12 6E-17 117.0 18.6 171 126-313 39-232 (388)
236 2ece_A 462AA long hypothetical 99.5 2.2E-10 7.6E-15 103.4 30.6 223 131-356 88-399 (462)
237 3hxj_A Pyrrolo-quinoline quino 99.5 1.2E-12 4.1E-17 118.5 16.2 296 172-512 25-321 (330)
238 1fwx_A Nitrous oxide reductase 99.4 8.6E-12 2.9E-16 116.6 20.0 253 134-411 99-432 (595)
239 1npe_A Nidogen, entactin; glyc 99.4 1.7E-09 5.9E-14 94.2 33.2 252 93-350 1-263 (267)
240 2ece_A 462AA long hypothetical 99.4 4.7E-10 1.6E-14 101.3 28.2 225 88-313 88-399 (462)
241 1kv9_A Type II quinohemoprotei 99.4 6.6E-10 2.3E-14 109.7 31.8 301 93-398 66-520 (668)
242 1kv9_A Type II quinohemoprotei 99.4 1E-10 3.5E-15 115.4 25.9 259 93-351 117-514 (668)
243 1fwx_A Nitrous oxide reductase 99.4 9.1E-10 3.1E-14 103.2 29.4 233 91-327 99-433 (595)
244 2ad6_A Methanol dehydrogenase 99.4 4.8E-10 1.6E-14 108.3 28.3 299 178-501 62-523 (571)
245 2ad6_A Methanol dehydrogenase 99.3 2.8E-09 9.5E-14 103.0 31.8 297 93-396 62-523 (571)
246 1w6s_A Methanol dehydrogenase 99.3 1.8E-09 6E-14 104.1 29.8 256 95-352 123-530 (599)
247 1w6s_A Methanol dehydrogenase 99.3 2.8E-09 9.7E-14 102.7 30.3 296 93-393 62-529 (599)
248 3ei3_A DNA damage-binding prot 99.3 1.6E-06 5.5E-11 90.1 55.4 408 79-512 551-1059(1158)
249 1flg_A Protein (quinoprotein e 99.3 4.4E-09 1.5E-13 101.6 31.8 297 93-395 68-544 (582)
250 1npe_A Nidogen, entactin; glyc 99.3 2.8E-08 9.6E-13 86.5 34.0 249 137-392 2-263 (267)
251 2hz6_A Endoplasmic reticulum t 99.3 9.1E-13 3.1E-17 120.5 5.6 204 264-497 8-216 (369)
252 3s94_A LRP-6, low-density lipo 99.3 1.1E-06 3.6E-11 85.6 48.4 367 82-473 84-511 (619)
253 2hz6_A Endoplasmic reticulum t 99.3 1.7E-12 5.7E-17 118.8 6.2 203 177-392 8-216 (369)
254 3s94_A LRP-6, low-density lipo 99.3 1.2E-06 4E-11 85.3 49.7 410 77-512 35-507 (619)
255 3ei3_A DNA damage-binding prot 99.3 2.9E-06 9.9E-11 88.2 55.2 400 81-513 513-997 (1158)
256 2iwa_A Glutamine cyclotransfer 99.3 9.6E-09 3.3E-13 87.2 26.7 208 285-514 9-236 (266)
257 1flg_A Protein (quinoprotein e 99.3 1.4E-08 4.9E-13 98.1 31.2 260 93-353 117-544 (582)
258 2iwa_A Glutamine cyclotransfer 99.2 1.2E-08 4.2E-13 86.6 24.8 207 199-411 10-238 (266)
259 2fp8_A Strictosidine synthase; 99.2 3.3E-08 1.1E-12 88.7 27.1 237 82-325 19-313 (322)
260 2p4o_A Hypothetical protein; p 99.2 3.5E-07 1.2E-11 81.2 32.8 228 254-504 32-277 (306)
261 3nol_A Glutamine cyclotransfer 99.2 5.5E-08 1.9E-12 81.4 25.4 193 73-274 32-245 (262)
262 4a0p_A LRP6, LRP-6, low-densit 99.1 9E-06 3.1E-10 79.2 54.6 402 82-512 37-505 (628)
263 2fp8_A Strictosidine synthase; 99.1 4.3E-07 1.5E-11 81.4 31.2 237 125-368 19-313 (322)
264 4a0p_A LRP6, LRP-6, low-densit 99.1 1.1E-05 3.8E-10 78.5 54.7 399 82-509 80-543 (628)
265 3nol_A Glutamine cyclotransfer 99.1 7E-08 2.4E-12 80.8 22.8 194 200-400 33-245 (262)
266 3nok_A Glutaminyl cyclase; bet 99.1 1.2E-07 4.1E-12 79.3 23.0 193 199-399 44-254 (268)
267 3mbr_X Glutamine cyclotransfer 99.0 6.1E-07 2.1E-11 74.5 26.4 194 199-399 10-223 (243)
268 1k3i_A Galactose oxidase precu 99.0 3.5E-08 1.2E-12 97.7 22.3 271 129-399 190-530 (656)
269 2p4o_A Hypothetical protein; p 99.0 1.3E-06 4.4E-11 77.5 29.9 230 79-315 29-278 (306)
270 3nok_A Glutaminyl cyclase; bet 99.0 4.2E-07 1.4E-11 76.1 24.1 193 73-273 44-254 (268)
271 3tc9_A Hypothetical hydrolase; 99.0 8E-07 2.7E-11 82.7 27.9 236 83-323 138-428 (430)
272 3mbr_X Glutamine cyclotransfer 99.0 1.9E-06 6.6E-11 71.5 26.9 195 73-274 10-224 (243)
273 3tc9_A Hypothetical hydrolase; 99.0 1.1E-06 3.7E-11 81.8 28.5 254 255-513 138-428 (430)
274 2xe4_A Oligopeptidase B; hydro 98.9 1.2E-07 4E-12 95.3 22.4 240 83-328 175-461 (751)
275 3qqz_A Putative uncharacterize 98.9 2.2E-06 7.6E-11 72.3 26.5 203 76-281 21-250 (255)
276 1k3i_A Galactose oxidase precu 98.9 1.5E-07 5.2E-12 93.2 21.8 239 171-410 190-497 (656)
277 1ijq_A LDL receptor, low-densi 98.9 2.6E-05 9.1E-10 69.3 33.7 210 80-291 28-245 (316)
278 2xbg_A YCF48-like protein; pho 98.8 4.6E-05 1.6E-09 68.1 33.7 270 124-407 35-319 (327)
279 3v64_C Agrin; beta propeller, 98.8 1.6E-05 5.5E-10 71.7 31.0 246 81-334 33-284 (349)
280 3v64_C Agrin; beta propeller, 98.8 4.5E-05 1.5E-09 68.8 33.8 241 127-375 36-282 (349)
281 4hw6_A Hypothetical protein, I 98.8 6.3E-06 2.2E-10 76.6 28.8 253 255-513 140-431 (433)
282 2xe4_A Oligopeptidase B; hydro 98.8 7.3E-07 2.5E-11 89.5 24.0 240 126-370 175-460 (751)
283 2xbg_A YCF48-like protein; pho 98.8 4.9E-05 1.7E-09 67.9 33.1 274 79-365 33-319 (327)
284 3qqz_A Putative uncharacterize 98.8 7.3E-06 2.5E-10 69.2 25.7 200 164-366 24-251 (255)
285 1ijq_A LDL receptor, low-densi 98.8 4.9E-05 1.7E-09 67.5 32.7 232 95-333 3-246 (316)
286 4hw6_A Hypothetical protein, I 98.8 7.4E-06 2.5E-10 76.1 27.8 237 82-323 139-431 (433)
287 3v65_B Low-density lipoprotein 98.8 1.3E-05 4.6E-10 73.4 29.2 245 83-335 78-328 (386)
288 3p5b_L Low density lipoprotein 98.8 0.0001 3.6E-09 67.7 34.1 235 94-335 84-330 (400)
289 3v65_B Low-density lipoprotein 98.8 4E-05 1.4E-09 70.2 31.2 241 128-376 80-326 (386)
290 3sov_A LRP-6, low-density lipo 98.7 5.5E-05 1.9E-09 67.0 30.1 233 138-375 6-245 (318)
291 3p5b_L Low density lipoprotein 98.7 0.00021 7.1E-09 65.7 34.0 234 138-377 85-329 (400)
292 3sov_A LRP-6, low-density lipo 98.7 5.4E-05 1.9E-09 67.1 28.5 234 95-334 6-247 (318)
293 3kya_A Putative phosphatase; s 98.7 5.3E-05 1.8E-09 70.5 29.0 253 255-513 140-473 (496)
294 3amr_A 3-phytase; beta-propell 98.7 2.6E-05 8.9E-10 68.3 25.2 194 177-375 39-271 (355)
295 2xzh_A Clathrin heavy chain 1; 98.6 0.00025 8.5E-09 60.8 31.5 263 229-509 47-326 (365)
296 3kya_A Putative phosphatase; s 98.6 0.00016 5.4E-09 67.3 28.8 245 83-330 140-480 (496)
297 3ott_A Two-component system se 98.5 0.0019 6.5E-08 65.2 50.1 400 81-512 21-445 (758)
298 3ott_A Two-component system se 98.5 0.0019 6.6E-08 65.1 52.8 391 82-510 191-622 (758)
299 3amr_A 3-phytase; beta-propell 98.4 0.00035 1.2E-08 61.3 25.3 194 135-333 39-272 (355)
300 2xzh_A Clathrin heavy chain 1; 98.4 0.00078 2.7E-08 57.9 32.5 255 102-369 48-333 (365)
301 3m0c_C LDL receptor, low-densi 98.4 0.0021 7.1E-08 64.2 33.2 232 138-375 397-639 (791)
302 1bpo_A Protein (clathrin); cla 98.4 0.0013 4.3E-08 59.0 33.2 263 229-509 46-325 (494)
303 2ism_A Putative oxidoreductase 98.3 0.00054 1.9E-08 61.7 25.5 225 168-398 32-333 (352)
304 2p9w_A MAL S 1 allergenic prot 98.3 0.00029 9.9E-09 61.2 22.3 157 169-326 15-216 (334)
305 3m0c_C LDL receptor, low-densi 98.3 0.0018 6E-08 64.7 30.7 233 95-334 397-641 (791)
306 2ism_A Putative oxidoreductase 98.3 0.0015 5E-08 58.9 27.3 225 81-313 30-333 (352)
307 3a9g_A Putative uncharacterize 98.2 0.0025 8.5E-08 57.3 29.3 227 168-398 30-330 (354)
308 2p9w_A MAL S 1 allergenic prot 98.2 0.0022 7.4E-08 55.8 26.8 156 84-239 15-214 (334)
309 1bpo_A Protein (clathrin); cla 98.2 0.0027 9.4E-08 56.9 31.9 255 102-369 47-332 (494)
310 1n7d_A LDL receptor, low-densi 98.1 2E-05 6.9E-10 78.0 12.6 211 80-292 404-622 (699)
311 3a9g_A Putative uncharacterize 98.0 0.007 2.4E-07 54.4 30.4 240 254-503 29-330 (354)
312 2g8s_A Glucose/sorbosone dehyd 98.0 0.0086 2.9E-07 53.9 26.1 236 168-408 19-350 (353)
313 3sre_A PON1, serum paraoxonase 98.0 0.0025 8.7E-08 56.7 22.0 185 255-460 51-285 (355)
314 1n7d_A LDL receptor, low-densi 98.0 2E-05 6.8E-10 78.1 9.0 227 102-334 385-623 (699)
315 2vpj_A Kelch-like protein 12; 97.9 0.0016 5.3E-08 57.4 20.0 214 188-410 31-278 (301)
316 2vpj_A Kelch-like protein 12; 97.9 0.0016 5.3E-08 57.4 19.7 217 146-369 31-279 (301)
317 2g8s_A Glucose/sorbosone dehyd 97.8 0.015 5.2E-07 52.2 27.6 233 82-318 18-347 (353)
318 2xn4_A Kelch-like protein 2; s 97.8 0.0045 1.5E-07 54.5 21.1 225 179-411 17-277 (302)
319 3sbq_A Nitrous-oxide reductase 97.8 0.022 7.4E-07 53.0 26.9 227 264-503 141-453 (638)
320 2xn4_A Kelch-like protein 2; s 97.8 0.0044 1.5E-07 54.5 20.0 228 93-327 16-278 (302)
321 4asc_A Kelch repeat and BTB do 97.7 0.0056 1.9E-07 54.2 20.0 212 181-400 8-253 (315)
322 3sre_A PON1, serum paraoxonase 97.7 0.024 8.3E-07 50.5 27.0 196 82-282 50-296 (355)
323 3pbp_A Nucleoporin NUP82; beta 97.7 0.0057 1.9E-07 54.9 19.0 142 315-467 40-207 (452)
324 1tl2_A L10, protein (tachylect 97.7 0.012 4.3E-07 47.5 19.1 179 306-507 4-202 (236)
325 3ii7_A Kelch-like protein 7; p 97.7 0.0071 2.4E-07 53.3 20.1 224 180-411 14-273 (306)
326 2be1_A Serine/threonine-protei 97.7 0.00083 2.8E-08 59.2 13.5 202 93-297 10-245 (339)
327 4asc_A Kelch repeat and BTB do 97.7 0.012 4.2E-07 52.0 21.6 226 96-327 8-279 (315)
328 3ii7_A Kelch-like protein 7; p 97.6 0.015 5.1E-07 51.2 21.2 225 138-369 14-273 (306)
329 2woz_A Kelch repeat and BTB do 97.6 0.018 6E-07 51.0 21.0 178 189-370 25-233 (318)
330 1zgk_A Kelch-like ECH-associat 97.5 0.012 4E-07 51.9 19.5 226 177-410 24-287 (308)
331 1xi4_A Clathrin heavy chain; a 97.5 0.0086 3E-07 62.3 20.2 261 230-508 47-324 (1630)
332 1zgk_A Kelch-like ECH-associat 97.5 0.016 5.4E-07 51.1 20.2 228 92-328 24-290 (308)
333 2be1_A Serine/threonine-protei 97.5 0.0074 2.5E-07 53.2 17.5 192 179-373 11-236 (339)
334 3das_A Putative oxidoreductase 97.5 0.05 1.7E-06 48.2 28.4 231 166-398 31-326 (347)
335 3das_A Putative oxidoreductase 97.5 0.053 1.8E-06 48.1 33.0 244 253-503 31-326 (347)
336 1xi4_A Clathrin heavy chain; a 97.4 0.0097 3.3E-07 61.9 19.2 255 102-368 47-331 (1630)
337 3pbp_A Nucleoporin NUP82; beta 97.4 0.014 4.9E-07 52.4 17.7 144 135-281 31-209 (452)
338 2uvk_A YJHT; unknown function, 97.3 0.012 4E-07 53.2 17.1 239 92-333 19-350 (357)
339 1tl2_A L10, protein (tachylect 97.3 0.03 1E-06 45.3 16.9 104 296-405 42-158 (236)
340 2woz_A Kelch repeat and BTB do 97.3 0.033 1.1E-06 49.3 19.0 181 104-288 25-235 (318)
341 3sbq_A Nitrous-oxide reductase 97.2 0.14 4.9E-06 47.7 27.0 225 140-368 74-408 (638)
342 2uvk_A YJHT; unknown function, 97.1 0.039 1.3E-06 49.8 18.5 193 177-374 65-348 (357)
343 1cru_A Protein (soluble quinop 96.9 0.11 3.6E-06 48.5 19.4 60 338-397 27-97 (454)
344 3s25_A Hypothetical 7-bladed b 96.9 0.2 7E-06 43.6 28.5 242 133-404 22-287 (302)
345 2zwa_A Leucine carboxyl methyl 96.8 0.15 5.2E-06 50.5 20.2 195 135-329 397-639 (695)
346 3s25_A Hypothetical 7-bladed b 96.8 0.25 8.4E-06 43.0 29.4 210 90-326 22-256 (302)
347 2zwa_A Leucine carboxyl methyl 96.7 0.14 4.9E-06 50.7 19.8 197 91-288 396-639 (695)
348 1cru_A Protein (soluble quinop 96.6 0.43 1.5E-05 44.4 31.0 105 210-314 27-163 (454)
349 2wg3_C Hedgehog-interacting pr 94.9 2.4 8.2E-05 39.4 28.3 228 82-313 14-354 (463)
350 2wg3_C Hedgehog-interacting pr 94.7 2.7 9.3E-05 39.0 26.2 108 168-275 15-160 (463)
351 1suu_A DNA gyrase subunit A; t 93.6 3.4 0.00012 36.0 25.6 197 263-472 6-231 (312)
352 3b7f_A Glycosyl hydrolase, BNR 92.8 5.5 0.00019 36.1 29.3 213 179-397 23-296 (394)
353 4hvt_A Ritya.17583.B, post-pro 92.4 9.2 0.00032 37.8 22.3 236 127-367 131-429 (711)
354 4hvt_A Ritya.17583.B, post-pro 92.1 10 0.00034 37.5 21.1 233 174-409 137-429 (711)
355 3b7f_A Glycosyl hydrolase, BNR 91.8 7.2 0.00025 35.3 28.1 288 93-388 22-391 (394)
356 3qhy_B Beta-lactamase inhibito 91.5 6 0.00021 33.8 18.5 245 209-499 23-268 (282)
357 3qhy_B Beta-lactamase inhibito 90.7 7.3 0.00025 33.3 17.6 217 255-511 25-242 (282)
358 3uc1_A DNA gyrase subunit A; D 90.7 8.2 0.00028 33.8 24.7 231 179-410 4-279 (327)
359 1zi0_A DNA gyrase subunit A; b 90.5 8.1 0.00028 33.5 26.3 195 264-471 2-225 (307)
360 3zwu_A Alkaline phosphatase PH 89.4 6.1 0.00021 37.8 13.1 62 82-144 476-550 (592)
361 3uc1_A DNA gyrase subunit A; D 89.3 11 0.00036 33.1 24.7 232 266-511 4-275 (327)
362 1zi0_A DNA gyrase subunit A; b 89.1 11 0.00036 32.8 25.9 234 176-410 1-277 (307)
363 1wp5_A Topoisomerase IV; broke 86.8 15 0.00053 32.0 24.1 197 263-472 3-225 (323)
364 3q6k_A 43.2 kDa salivary prote 86.4 18 0.00061 32.4 22.2 174 316-503 123-342 (381)
365 3kci_A Probable E3 ubiquitin-p 86.4 18 0.00063 32.6 29.5 246 211-472 54-345 (389)
366 3l6v_A GYRA, DNA gyrase subuni 86.4 18 0.0006 32.3 26.9 148 262-410 4-180 (370)
367 1suu_A DNA gyrase subunit A; t 86.0 17 0.00057 31.6 27.6 192 176-368 6-231 (312)
368 3zwu_A Alkaline phosphatase PH 85.2 3.3 0.00011 39.6 8.7 59 444-502 478-548 (592)
369 3kci_A Probable E3 ubiquitin-p 84.9 22 0.00075 32.1 31.0 235 264-512 61-342 (389)
370 4a9v_A PHOX; hydrolase, beta-p 83.5 5.5 0.00019 37.7 9.2 60 443-502 477-548 (592)
371 3no0_A DNA gyrase subunit A; D 81.7 23 0.0008 30.0 24.1 189 305-510 34-239 (276)
372 3no0_A DNA gyrase subunit A; D 79.7 27 0.00093 29.6 23.8 195 211-410 25-246 (276)
373 4gq2_M Nucleoporin NUP120; bet 78.2 66 0.0023 33.2 22.5 38 442-479 236-273 (950)
374 1wp5_A Topoisomerase IV; broke 72.2 49 0.0017 28.8 24.0 202 81-283 38-276 (323)
375 3l6v_A GYRA, DNA gyrase subuni 71.9 55 0.0019 29.2 29.0 234 175-409 4-315 (370)
376 4fhn_B Nucleoporin NUP120; pro 71.2 12 0.0004 39.7 8.6 38 126-163 239-276 (1139)
377 4a9v_A PHOX; hydrolase, beta-p 70.7 31 0.0011 32.7 10.2 61 296-356 477-549 (592)
378 3f7f_A Nucleoporin NUP120; nuc 69.2 21 0.00072 34.9 9.0 37 126-164 223-259 (729)
379 4fhn_B Nucleoporin NUP120; pro 67.2 42 0.0014 35.5 11.7 39 442-480 238-276 (1139)
380 2cn3_A Xyloglucanase, beta-1,4 66.7 1.1E+02 0.0036 30.5 38.8 104 297-402 385-499 (737)
381 4gz8_A Semaphorin-3A; multi-do 61.6 16 0.00055 35.5 6.7 36 75-111 463-498 (667)
382 3f7f_A Nucleoporin NUP120; nuc 60.7 46 0.0016 32.7 9.5 36 444-481 224-259 (729)
383 1q47_A Semaphorin 3A; beta pro 57.9 23 0.00077 33.2 6.8 29 79-107 459-487 (495)
384 1sqj_A OXG-RCBH, oligoxylogluc 57.7 1.6E+02 0.0055 29.6 38.4 148 81-230 14-190 (789)
385 3q6k_A 43.2 kDa salivary prote 54.8 1.2E+02 0.004 27.2 24.4 167 188-355 123-341 (381)
386 1zvt_A Topoisomerase IV subuni 51.5 1.1E+02 0.0036 25.6 14.9 148 351-512 4-160 (256)
387 2cn3_A Xyloglucanase, beta-1,4 51.3 2E+02 0.0067 28.6 35.1 105 82-187 23-153 (737)
388 1olz_A Semaphorin 4D; developm 44.4 51 0.0017 32.2 7.1 34 77-111 445-480 (663)
389 1sqj_A OXG-RCBH, oligoxylogluc 43.7 2.7E+02 0.0091 28.0 21.1 149 209-358 14-190 (789)
390 3mez_B Mannose-specific lectin 43.2 83 0.0028 22.0 10.1 26 341-368 59-84 (113)
391 3mez_B Mannose-specific lectin 42.3 86 0.003 22.0 9.8 26 128-155 59-84 (113)
392 3a0f_A Xyloglucanase; beta-pro 40.8 2.9E+02 0.0099 27.6 32.5 439 1-510 26-613 (763)
393 3nvq_A Semaphorin-7A; beta-pro 39.5 62 0.0021 30.9 6.7 29 79-107 416-444 (590)
394 3al9_A Plexin-A2; beta-propell 36.1 1.2E+02 0.004 28.8 8.0 70 81-150 399-476 (539)
395 3al9_A Plexin-A2; beta-propell 35.2 1.1E+02 0.0039 28.9 7.8 68 443-510 401-476 (539)
396 4gq2_M Nucleoporin NUP120; bet 34.1 4.1E+02 0.014 27.4 21.5 39 255-293 237-275 (950)
397 4d9s_A UVB-resistance protein 30.0 3E+02 0.01 24.6 33.4 291 215-511 19-353 (406)
398 3ol2_B Plexin-B1; beta-propell 26.0 3.1E+02 0.01 25.9 8.8 69 82-150 387-461 (528)
399 1q47_A Semaphorin 3A; beta pro 25.9 1.6E+02 0.0056 27.4 7.0 68 443-510 405-487 (495)
400 3oky_A Plexin-A2; transmembran 25.6 1E+02 0.0035 30.2 5.8 28 80-107 447-475 (681)
401 3oky_B Putative uncharacterize 23.7 1.3E+02 0.0043 28.7 5.8 27 81-107 469-495 (565)
402 3mez_A Mannose-specific lectin 22.3 2E+02 0.0069 19.9 7.8 53 342-407 23-75 (111)
403 3ol2_B Plexin-B1; beta-propell 20.4 1.8E+02 0.0061 27.4 6.1 68 443-510 388-461 (528)
404 1olz_A Semaphorin 4D; developm 20.3 6.1E+02 0.021 24.8 10.8 69 82-150 397-477 (663)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.2e-67 Score=517.71 Aligned_cols=483 Identities=14% Similarity=0.222 Sum_probs=398.1
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEee----ccccccccccccccccccCcceeeeccceEEEE
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMG----CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY 76 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (515)
++|+||+++|++++ ++.|.+|++.+......+..+...+.+. ....+...+.++.+++|+..+. .......
T Consensus 24 ~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~----~~~~~~~ 98 (611)
T 1nr0_A 24 LGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT----THILKTT 98 (611)
T ss_dssp CEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST----TCCEEEE
T ss_pred EeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCC----cceeeEe
Confidence 57899999999986 5699999998888888887776655544 3355666778889999987432 1223445
Q ss_pred EecCCCcEEEEEEecCCCEEEEEecC----ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCc-EEEEEecCCcEEEE
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVGTVN----CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFS-SVFATCSKNDIRIW 151 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw 151 (515)
+.+|.++|.+++|+|++++||+++.+ +.|++||... . ...+.+|...|.+++|+|+++ .|++++.|++|++|
T Consensus 99 ~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~-~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lw 175 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S-NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF 175 (611)
T ss_dssp EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B-CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C-cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEE
Confidence 67899999999999999999998865 4788887432 3 345678999999999999987 58999999999999
Q ss_pred eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEE
Q psy17610 152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLL 225 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~ 225 (515)
|..+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.. +|...|.+++|+|++++|+
T Consensus 176 d~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~ 255 (611)
T 1nr0_A 176 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 255 (611)
T ss_dssp ETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred ECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE
Confidence 9999999999999999999999999999999999999999999999998877733 7999999999999999999
Q ss_pred EecCCCcEEEEEccCCcee-----------------------------------------eEEeeccccCceEEEEEecC
Q psy17610 226 SGGGEGQVRIWKLTRESQS-----------------------------------------LQCVLKEHTSSVSVIQIKSD 264 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~-----------------------------------------~~~~~~~~~~~v~~~~~~~~ 264 (515)
+++.|++|++||+...... ....+.+|...|.+++|+|+
T Consensus 256 s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 9999999999998643211 22345689999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccceEEEEE--EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce--------------
Q psy17610 265 SKEAMSASTDGTCVLWDLIKSTRLIIM--ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-------------- 328 (515)
Q Consensus 265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~-------------- 328 (515)
+++|++++.|++|++||+.+++....+ .+...+.++++++++ .+++++.|+.+++|+...+..
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~ 414 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP 414 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecCCCC
Confidence 999999999999999999988776553 245579999999765 677889999999999765321
Q ss_pred ---------------------------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee--eeeccCCC
Q psy17610 329 ---------------------------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP--CFVGIGHA 379 (515)
Q Consensus 329 ---------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~ 379 (515)
+..+. +...+.+++|+|+|++|++|+.|+.|++||+.++.. ... .+|.
T Consensus 415 ~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~ 491 (611)
T 1nr0_A 415 LGLAVSADGDIAVAACYKHIAIYSHGKLTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHP 491 (611)
T ss_dssp EEEEECTTSSCEEEEESSEEEEEETTEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECS
T ss_pred cEEEEeCCCcEEEEEeCceEEEEeCCceeeee--cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCC
Confidence 11111 225678999999999999999999999999987643 234 6899
Q ss_pred CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEe
Q psy17610 380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC 459 (515)
Q Consensus 380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 459 (515)
..|++++|+|++++|++++.|++|++|++........ ......|...|.+++|+|+|++||++
T Consensus 492 ~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~-----------------~~~~~~H~~~V~~v~fspdg~~lasg 554 (611)
T 1nr0_A 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH-----------------TNSWTFHTAKVACVSWSPDNVRLATG 554 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC-----------------CCCCCCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee-----------------eeeeeecccceeEEEECCCCCEEEEE
Confidence 9999999999999999999999999999865211000 00112377889999999999999999
Q ss_pred ecCCeEEEEecCCCe-ee-eeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 460 STNKMIDYWETCDGS-II-RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 460 ~~dg~v~iwd~~~~~-~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
+.|++|++||+.+++ .. ..+.+|....|.+++|+|+++ |++++.||+|++|++
T Consensus 555 s~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 555 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp ETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 999999999998865 33 566777348999999999998 999999999999985
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-65 Score=501.96 Aligned_cols=476 Identities=21% Similarity=0.336 Sum_probs=400.7
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeec----cccccccccccccccccCcce-----------
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGC----YGKLIKKKVSTKLKDVNAEDV----------- 65 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----------- 65 (515)
|+|+||+++|++|+.+|.|.+||.+. +.+..+..+...+...+ ...+........+..|+....
T Consensus 63 l~fspdg~~las~~~d~~i~vWd~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 141 (577)
T 2ymu_A 63 VAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS 141 (577)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSC
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCc
Confidence 57999999999999999999999754 55666665544433322 233333444444444432211
Q ss_pred ----------------------eeec-cceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc
Q psy17610 66 ----------------------SLYS-AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC 122 (515)
Q Consensus 66 ----------------------~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 122 (515)
.++. ..........|...|.+++|+|++++|++++.|+.|++||... .....+.+
T Consensus 142 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~--~~~~~~~~ 219 (577)
T 2ymu_A 142 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTG 219 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEEEEEC
T ss_pred eeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC--cEEEEEec
Confidence 1111 1123345567889999999999999999999999999999754 44455677
Q ss_pred CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF 202 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 202 (515)
|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.+++++.|+.|++|+.. ++...
T Consensus 220 ~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~ 297 (577)
T 2ymu_A 220 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQ 297 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEE
Confidence 9999999999999999999999999999996 467888899999999999999999999999999999999964 55666
Q ss_pred EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610 203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282 (515)
Q Consensus 203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 282 (515)
.+ .+|...|.+++|+|+++.+++++.|+.|++||... .....+.+|...+.+++|+|+++++++++.|+.+++||.
T Consensus 298 ~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 298 TL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp EE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC---CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 66 68999999999999999999999999999999743 334567889999999999999999999999999999996
Q ss_pred ccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610 283 IKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361 (515)
Q Consensus 283 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 361 (515)
. ++.+..+. +...+.+++|+|+++++++++.|+.|++||. +++.+..+..+. ..+.+++|+|++++|++++.|+.|
T Consensus 374 ~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 374 N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp T-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS-SCEEEEEECTTSSEEEEEETTSEE
T ss_pred C-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC-CCeEEEEECCCCCEEEEEcCCCEE
Confidence 4 45555544 5568999999999999999999999999995 677788888776 899999999999999999999999
Q ss_pred EEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP 441 (515)
Q Consensus 362 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (515)
++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++|+.... ....+..|.
T Consensus 451 ~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------------------~~~~~~~h~ 508 (577)
T 2ymu_A 451 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------------------LLQTLTGHS 508 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------------------EEEEEECCS
T ss_pred EEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------------------EEEEEeCCC
Confidence 99997 56778888999999999999999999999999999999995321 112344577
Q ss_pred ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
..|++++|+|++++||+++.||.|++||. +++++..+.+|. ..|++++|+|||++|+|++.||+|++||
T Consensus 509 ~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~-~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 509 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 88999999999999999999999999995 788999999987 9999999999999999999999999997
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-64 Score=499.14 Aligned_cols=473 Identities=21% Similarity=0.342 Sum_probs=408.9
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEee----ccccccccccccccccccCcceeeeccceEEEE
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMG----CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY 76 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (515)
|+|+||+++|++|+.+|.|.+||. +.+.+..+..+...+... ....+.....++.+++|+.. +.....
T Consensus 22 ~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-------~~~~~~ 93 (577)
T 2ymu_A 22 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-------GQLLQT 93 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-------SCEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-------CCEEEE
Confidence 579999999999999999999996 456777788776655443 33456667777888899853 234456
Q ss_pred EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce---------------------------------------eE
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT---------------------------------------LT 117 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~---------------------------------------~~ 117 (515)
+.+|.+.|.+++|+|++++|++++.|+.+++|+...... ..
T Consensus 94 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (577)
T 2ymu_A 94 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLL 173 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEE
T ss_pred EECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeee
Confidence 778999999999999999999999999999999754211 11
Q ss_pred EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC
Q psy17610 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS 197 (515)
Q Consensus 118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 197 (515)
.....|...|.++.|+|+++++++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||..
T Consensus 174 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~- 251 (577)
T 2ymu_A 174 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN- 251 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred eeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-
Confidence 123356778999999999999999999999999996 578888999999999999999999999999999999999964
Q ss_pred CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610 198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC 277 (515)
Q Consensus 198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 277 (515)
++.+..+ .+|...|.+++|+|+++.+++++.|+.|++|+.. ......+.+|...|.+++|+|+++.+++++.|+.|
T Consensus 252 ~~~~~~~-~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i 327 (577)
T 2ymu_A 252 GQLLQTL-TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 327 (577)
T ss_dssp SCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCEEEEE-ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC---CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeE
Confidence 5666666 6899999999999999999999999999999964 34566788999999999999999999999999999
Q ss_pred EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
++||...........+...+.+++++|+++++++++.++.+++||. +++.+..+..+. ..+.+++|+|++++|++++.
T Consensus 328 ~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~dg~~l~~~~~ 405 (577)
T 2ymu_A 328 KLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRGVAFSPDGQTIASASD 405 (577)
T ss_dssp EEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCS-SCEEEEEECTTSSCEEEEET
T ss_pred EEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCC-CCeEEEEECCCCCEEEEEeC
Confidence 9999876665554455678999999999999999999999999995 677788888766 89999999999999999999
Q ss_pred CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610 358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII 437 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (515)
|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++|+.... .....
T Consensus 406 d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~---------------------~~~~~ 463 (577)
T 2ymu_A 406 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ---------------------LLQTL 463 (577)
T ss_dssp TSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC---------------------EEEEE
T ss_pred CCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC---------------------EEEEE
Confidence 999999996 56788888999999999999999999999999999999996421 11223
Q ss_pred ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
..|...|.+++|+|++++|++++.|+.|++||. +++++..+.+|. ..|++++|+|||++|++++.||.|++||+
T Consensus 464 ~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~-~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCC-CCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 456778999999999999999999999999995 788999999987 89999999999999999999999999983
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-63 Score=490.04 Aligned_cols=427 Identities=15% Similarity=0.192 Sum_probs=356.4
Q ss_pred ccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEe
Q psy17610 54 STKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQF 132 (515)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~ 132 (515)
.+.+.+|+..+.+ ....+.+|...|++++|+|+|++||+|+.|++|+|||+.++.. ....+.+|.++|.+++|
T Consensus 38 ~~~v~l~~~~~~~------~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f 111 (611)
T 1nr0_A 38 GTSVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 111 (611)
T ss_dssp TTEEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE
T ss_pred CCEEEEecCCCcc------cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE
Confidence 3466777764322 3345678999999999999999999999999999999975433 34567789999999999
Q ss_pred CCCCcEEEEEecC----CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCC
Q psy17610 133 PVNFSSVFATCSK----NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNA 207 (515)
Q Consensus 133 ~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~ 207 (515)
+|+++.|++++.+ +.|++|| .++....+.+|...|.+++|+|++. .|++++.|+.|++||..+++....+ .+
T Consensus 112 s~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~ 188 (611)
T 1nr0_A 112 DSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GE 188 (611)
T ss_dssp CTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CC
T ss_pred CCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-cc
Confidence 9999999998875 3677777 5667777889999999999999987 6999999999999999998888877 78
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec-------cccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK-------EHTSSVSVIQIKSDSKEAMSASTDGTCVLW 280 (515)
Q Consensus 208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 280 (515)
|...|.+++|+|++++|++++.|+.|++||+... .....+. +|...|.+++|+|++++|++++.|++|++|
T Consensus 189 H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 189 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW 266 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCcEEEEECCCC--cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 9999999999999999999999999999998543 3444442 799999999999999999999999999999
Q ss_pred EcccceEEEEEE--------------------------------------------cCccEEEEEEcCCCcEEEEEECCC
Q psy17610 281 DLIKSTRLIIMI--------------------------------------------LPSMIMSAAYHPSEVQLITCSTNK 316 (515)
Q Consensus 281 d~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~ 316 (515)
|+++++....+. +...+.+++|+|++++|++++.|+
T Consensus 267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 998877654432 334689999999999999999999
Q ss_pred eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-------------------------
Q psy17610 317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP------------------------- 371 (515)
Q Consensus 317 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------------------- 371 (515)
.|++||+.+++....+...+...+.+++|++++ .+++++.|+.+++|+...+..
T Consensus 347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 425 (611)
T 1nr0_A 347 HINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI 425 (611)
T ss_dssp CEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC
T ss_pred cEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcE
Confidence 999999999988776644455889999999876 577888999999999764321
Q ss_pred ----------------eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccce
Q psy17610 372 ----------------CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRL 435 (515)
Q Consensus 372 ----------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (515)
+..+ .|...+.+++|+||+++|++++.|+.|++||+..... ...
T Consensus 426 ~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~-------------------~~~ 485 (611)
T 1nr0_A 426 AVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV-------------------SEV 485 (611)
T ss_dssp EEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE-------------------EEE
T ss_pred EEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce-------------------eee
Confidence 0111 2456789999999999999999999999999864320 000
Q ss_pred eeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-Ceeeee-ecc-cccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 436 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-GSIIRS-LEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 436 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~-~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
....|...|++++|+|+|++|++++.|+.|++|++.+ +++... ... |. ..|.+++|+|||++|++++.|++|++|+
T Consensus 486 ~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~-~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 486 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT-AKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS-SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc-cceeEEEECCCCCEEEEEECCCcEEEEE
Confidence 1135778899999999999999999999999999988 666554 333 65 8999999999999999999999999998
Q ss_pred E
Q psy17610 513 Y 513 (515)
Q Consensus 513 ~ 513 (515)
+
T Consensus 565 ~ 565 (611)
T 1nr0_A 565 M 565 (611)
T ss_dssp T
T ss_pred C
Confidence 5
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.8e-61 Score=513.85 Aligned_cols=490 Identities=14% Similarity=0.192 Sum_probs=420.2
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeec----cccccccccccccccccCcceeeeccceEEEE
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGC----YGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY 76 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (515)
++|+|+++++++|+.+|.|.+||+.+...+..+..+...+.... ...+.....++.+.+|+..+.+ ....
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~------~~~~ 694 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK------LVHT 694 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------EEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc------eEEE
Confidence 47899999999999999999999999988888887766655543 3456667778889999886543 3455
Q ss_pred EecCCCcEEEEEEec--CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 77 LLKDDSGISSLQYNP--VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
+.+|...|.+++|+| ++.++++|+.|+.|++||+.++.. ...+.+|.+.|.+++|+|+++.+++++.|+.|++||+.
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence 678999999999999 566899999999999999999654 44566799999999999999999999999999999998
Q ss_pred CCceeEEEE-------------------------------------------------------ecCeEEEEEEEeeCCC
Q psy17610 155 TLNELLRIS-------------------------------------------------------VMNMICACIVFTYDGK 179 (515)
Q Consensus 155 ~~~~~~~~~-------------------------------------------------------~~~~~v~~~~~~~~~~ 179 (515)
+++....+. +|...+.+++|+|+++
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 853 (1249)
T 3sfz_A 774 SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH 853 (1249)
T ss_dssp GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT
T ss_pred CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC
Confidence 765544332 4566788999999999
Q ss_pred EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC------------------
Q psy17610 180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE------------------ 241 (515)
Q Consensus 180 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------------------ 241 (515)
++++++.+|.|++||+.++.....+ .+|...|.+++|+|+++++++++.|+.|++|++...
T Consensus 854 ~l~~~~~dg~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 854 LAVIALSQYCVELWNIDSRLKVADC-RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp EEEEECSSSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred EEEEEeCCCeEEEEEcCCCceeeec-CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 9999999999999999999988888 699999999999999999999999999999996320
Q ss_pred -----------------------------------------------------------ceeeEEeeccccCceEEEEEe
Q psy17610 242 -----------------------------------------------------------SQSLQCVLKEHTSSVSVIQIK 262 (515)
Q Consensus 242 -----------------------------------------------------------~~~~~~~~~~~~~~v~~~~~~ 262 (515)
.......+.+|...|.+++|+
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 1012 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT 1012 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC
Confidence 011223455788999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610 263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC 342 (515)
Q Consensus 263 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 342 (515)
|+++++++++.||.|++||+.+++......+...+.+++++|++ .+++++.++.+++||+.+++....+..+. ..+.+
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~~v~~ 1090 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQ-GTVLS 1090 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCS-SCCCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccC-CcEEE
Confidence 99999999999999999999999888777777899999999965 57788999999999999999999998876 88999
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc
Q psy17610 343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS 422 (515)
Q Consensus 343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 422 (515)
++|+|+++++++++.||.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.+.+........
T Consensus 1091 ~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~-- 1168 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPI-- 1168 (1249)
T ss_dssp EEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCC--
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999876532211000
Q ss_pred eeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610 423 SKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 502 (515)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 502 (515)
........|...|++++|+|++++|++++ |.|++||+.+++.+..+..|. ..|.+++|+|||++|+++
T Consensus 1169 ---------~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~-~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1169 ---------SVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNG-TNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp ---------C-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSS-CCCCCCEECSSSCCEEEE
T ss_pred ---------cccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccC-CcccEEEECCCCCEEEEe
Confidence 00111234667899999999999999885 899999999999999998886 899999999999999999
Q ss_pred ecCCeEEEEEEe
Q psy17610 503 GADQIVKICLYI 514 (515)
Q Consensus 503 ~~dg~v~iw~~~ 514 (515)
+.||.|++|+++
T Consensus 1237 ~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1237 DNLGILYILQVL 1248 (1249)
T ss_dssp CTTCCEEEECCC
T ss_pred cCCcEEEEEeec
Confidence 999999999975
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.3e-59 Score=463.50 Aligned_cols=441 Identities=14% Similarity=0.182 Sum_probs=371.5
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD 80 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (515)
|+|+|++++|++|+ +|.|.+||+.+.... . .....+.+|
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~-------------------------------~---------~~~~~~~~h 62 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSK-------------------------------V---------PPVVQFTGH 62 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCS-------------------------------S---------CSEEEECTT
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCc-------------------------------c---------ccceEEecC
Confidence 57899999999987 789999997753000 0 023345679
Q ss_pred CCc-EEEEEEec--CCCEEEEEecCceEEEEECCCC-------ceeEEeeccCccCeEEEEeCCCCcEEEEEecC----C
Q psy17610 81 DSG-ISSLQYNP--VNNKVFVGTVNCEIFLIDMNSG-------FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK----N 146 (515)
Q Consensus 81 ~~~-v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~ 146 (515)
.+. |++++|+| ++++||+|+.||.|++||+.++ ......+.+|..+|.+++|+|+++++++++.+ +
T Consensus 63 ~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~ 142 (615)
T 1pgu_A 63 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFG 142 (615)
T ss_dssp TTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSE
T ss_pred CCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCcc
Confidence 999 99999999 9999999999999999999754 24555667799999999999999999999987 6
Q ss_pred cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCC---CeEEEEEcCC-C
Q psy17610 147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNR---GVTALAITQD-G 221 (515)
Q Consensus 147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~ 221 (515)
.|.+|| .++.+..+..|...|.+++|+|+++ .+++++.|+.|++||+.+++....+ ..|.. .|.+++|+|+ +
T Consensus 143 ~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 143 VFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSG 219 (615)
T ss_dssp EEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTC
T ss_pred EEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCC
Confidence 788887 6778888899999999999999998 8999999999999999999998888 68888 9999999999 9
Q ss_pred CEEEEecCCCcEEEEEccCCceeeEEee-c---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---
Q psy17610 222 TRLLSGGGEGQVRIWKLTRESQSLQCVL-K---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--- 294 (515)
Q Consensus 222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--- 294 (515)
++|++++.|+.|++||+. .......+ . .|...|.+++|+ +++++++++.|+.|++||+++++....+..+
T Consensus 220 ~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGK--SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp CEEEEEETTCCEEEEETT--TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred CEEEEEeCCCeEEEEECC--CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 999999999999999995 34455566 5 899999999999 9999999999999999999999998888776
Q ss_pred --ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC------------------------
Q psy17610 295 --SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD------------------------ 348 (515)
Q Consensus 295 --~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~------------------------ 348 (515)
..+.++.+. ++.++++++.++.|++||+.+++.+..+..+. ..+.+++| |+
T Consensus 297 ~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 297 LGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHN-KGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp GGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCS-SCEEEEET-TTTEEEETTSCEEETTTTEEECCCCS
T ss_pred ccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCC-CCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccC
Confidence 467778875 89999999999999999998877776665433 33333333 21
Q ss_pred --------------------------------------------------------------------------------
Q psy17610 349 -------------------------------------------------------------------------------- 348 (515)
Q Consensus 349 -------------------------------------------------------------------------------- 348 (515)
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence
Q ss_pred --CCEEEEEcC-CCeEEEEEccCCeee-eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610 349 --GKYFLTGGA-DQIVKMWMYREGVPC-FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK 424 (515)
Q Consensus 349 --~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 424 (515)
++++++++. |+.|++||+.+++.. ..+.+|...|++++|+|++++|++++.||.|++||+...+..
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~---------- 523 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK---------- 523 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE----------
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce----------
Confidence 445555565 667777777665544 667789999999999999999999999999999999765421
Q ss_pred eecccccccceeeec-CcccEEEeeecc----------CCcEEEEeecCCeEEEEecCCC-eeeeeecccccceEEEEEE
Q psy17610 425 ISRSTARSTRLIIMI-LPSMIMSAAYHP----------SEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDF 492 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~-~~~~i~~~~~s~----------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~v~~~~~ 492 (515)
..... |...|++++|+| ++++|++++.||.|++||+.++ +++..+.+|. ..|.+++|
T Consensus 524 ----------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~-~~v~~l~~ 592 (615)
T 1pgu_A 524 ----------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK-DGVNNLLW 592 (615)
T ss_dssp ----------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST-TCEEEEEE
T ss_pred ----------eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCc-cceEEEEE
Confidence 11222 667899999999 9999999999999999999998 7888899887 99999999
Q ss_pred cCCCcEEEEeecCCeEEEEEE
Q psy17610 493 VDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 493 s~~~~~l~s~~~dg~v~iw~~ 513 (515)
+|+++ |++++.||.|++|++
T Consensus 593 s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 593 ETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EETTE-EEEEETTSCEEEEEE
T ss_pred cCCCC-eEEecCCceEEEEee
Confidence 99999 999999999999997
No 7
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-58 Score=466.45 Aligned_cols=461 Identities=11% Similarity=0.098 Sum_probs=349.0
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD 80 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (515)
|+|+|++++|++|+.+|.|.+|+..+. .......|
T Consensus 23 lafspdg~~lAsgs~Dg~I~lw~~~~~---------------------------------------------~~~~~~~~ 57 (902)
T 2oaj_A 23 AAFDFTQNLLAIATVTGEVHIYGQQQV---------------------------------------------EVVIKLED 57 (902)
T ss_dssp EEEETTTTEEEEEETTSEEEEECSTTC---------------------------------------------EEEEECSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCc---------------------------------------------EEEEEcCC
Confidence 579999999999999999999996542 11223457
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee-
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL- 159 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~- 159 (515)
..+|.+++|+| +++|++++.|+.|++||+.+++.+... . |.+.|++++|+|+++++++++.||.|++||+++++..
T Consensus 58 ~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~-~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 58 RSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV-F-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS 134 (902)
T ss_dssp CCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE-E-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE-c-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 88999999999 889999999999999999987655444 3 7789999999999999999999999999999987653
Q ss_pred ----------EEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecCCC------------------CC
Q psy17610 160 ----------LRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAH------------------NR 210 (515)
Q Consensus 160 ----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~------------------~~ 210 (515)
..+.+|..+|.+++|+|+ +..+++++.||.| +||+++++....+. .| ..
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCBCC
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe-cccCCcCCCcccccccccccCC
Confidence 112357789999999996 5789999999999 99999998887763 33 57
Q ss_pred CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee---c-------------cccCceEEEEEec----CC-CEEE
Q psy17610 211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL---K-------------EHTSSVSVIQIKS----DS-KEAM 269 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~-------------~~~~~v~~~~~~~----~~-~~l~ 269 (515)
.|.+++|+|+|++|++++.||.|++||+++........+ . .|...|.+++|++ ++ ..++
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 799999999999999999999999999965432221122 1 1355799999965 33 4566
Q ss_pred EEeCC-----CcEEEEEcc------------------cceEEEEEE--cCccEEEEEEcC----------CCcEEEEEEC
Q psy17610 270 SASTD-----GTCVLWDLI------------------KSTRLIIMI--LPSMIMSAAYHP----------SEVQLITCST 314 (515)
Q Consensus 270 ~~~~d-----~~i~iwd~~------------------~~~~~~~~~--~~~~~~~~~~~~----------~~~~l~~~~~ 314 (515)
+++.+ ..+.+|++. +.+....+. ....+..+.+.+ +...+++++.
T Consensus 293 sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~ 372 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILG 372 (902)
T ss_dssp EEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEET
T ss_pred eCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcC
Confidence 77665 378899853 223333333 356788888765 3447888999
Q ss_pred CCeEEEEeCCCCceEEE-------EecCC---------------------------------CccEEEEEEcCCCCEEEE
Q psy17610 315 NKMIDYWETCDGSIIRS-------LEGSD---------------------------------VAAVNCVDFVDDGKYFLT 354 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~-------~~~~~---------------------------------~~~i~~~~~~~~~~~l~~ 354 (515)
++.|++||+.++..... +..++ ...+..++|+|++++|++
T Consensus 373 dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laS 452 (902)
T 2oaj_A 373 NGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFIT 452 (902)
T ss_dssp TSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEE
T ss_pred CCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEE
Confidence 99999999977754322 11111 123344566899999999
Q ss_pred EcCCCeEEEEEccCCeee----ee--c-----cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccC------C
Q psy17610 355 GGADQIVKMWMYREGVPC----FV--G-----IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVG------D 417 (515)
Q Consensus 355 ~~~dg~i~i~d~~~~~~~----~~--~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~------~ 417 (515)
|+.|++|++||+.++... .. + .+|...|++++|+||+++||+++.||+|++|++...+.... .
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~ 532 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESG 532 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----------
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCc
Confidence 999999999999877421 11 1 17899999999999999999999999999999976531000 0
Q ss_pred C-------------cccceeeec------ccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee-
Q psy17610 418 S-------------RSLSSKISR------STARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR- 477 (515)
Q Consensus 418 ~-------------~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~- 477 (515)
. ......... .........+..|...|++++||||| +||+|+.|++|++||+.++..+.
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~ 611 (902)
T 2oaj_A 533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM 611 (902)
T ss_dssp -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE
Confidence 0 000000000 00001123455689999999999999 99999999999999998887654
Q ss_pred ----eec-ccccceEEEEEEc-----CCC---cEEEEeecCCeEEEEEE
Q psy17610 478 ----SLE-GSDVAAVNCVDFV-----DDG---KYFLTGGADQIVKICLY 513 (515)
Q Consensus 478 ----~~~-~~~~~~v~~~~~s-----~~~---~~l~s~~~dg~v~iw~~ 513 (515)
.+. +|. ..|++++|+ ||| ++|++|+.||+|++||+
T Consensus 612 ~~~~~~~~gh~-~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 612 ENIREISGAQS-ACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEGGGTCSSCC-CCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred eehhHhccccc-cceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 232 665 889999999 885 89999999999999997
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.2e-56 Score=476.67 Aligned_cols=439 Identities=17% Similarity=0.256 Sum_probs=373.1
Q ss_pred eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
.....+.+|.+.|++++|+|++++||+|+.||.|++||..++..+ ..+.+|.+.|.+++|+|+++++++++.|+.|++|
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL-LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE-EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 344567799999999999999999999999999999999996544 4566899999999999999999999999999999
Q ss_pred eCCCCceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610 152 SVRTLNELLRISVMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 229 (515)
|+.+++.+..+.+|...|.+++|+| ++..+++++.|+.|++||+.+++....+ .+|...|.+++|+|+++++++++.
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-FGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-CCCSSCEEEEEECSSTTEEEEEES
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-cCCCCCEEEEEEecCCCEEEEEEC
Confidence 9999999999999999999999999 5568999999999999999999998888 689999999999999999999999
Q ss_pred CCcEEEEEccCCceee-----------------------------------------------------EEeeccccCce
Q psy17610 230 EGQVRIWKLTRESQSL-----------------------------------------------------QCVLKEHTSSV 256 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~-----------------------------------------------------~~~~~~~~~~v 256 (515)
||.|++||+....... .....+|...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 9999999986432110 01112678899
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce-------
Q psy17610 257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI------- 328 (515)
Q Consensus 257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~------- 328 (515)
.+++|+|++..+++++.|+.|++||+.++.....+..+ ..+.+++|+|+++.+++++.|+.+++|++.+...
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLK 923 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeeccc
Confidence 99999999999999999999999999999888777644 5799999999999999999999999999653110
Q ss_pred ----------------------EEEEe-------cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610 329 ----------------------IRSLE-------GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA 379 (515)
Q Consensus 329 ----------------------~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 379 (515)
..... ......+.+++++|+++++++|+.+|.|++||+.+++....+.+|.
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred ceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence 00000 0112578999999999999999999999999999999999999999
Q ss_pred CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee--------------------eecccccccceeeec
Q psy17610 380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK--------------------ISRSTARSTRLIIMI 439 (515)
Q Consensus 380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 439 (515)
..|++++|+|++++|++++.||.|++|++................ ...............
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 1083 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC 1083 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc
Confidence 999999999999999999999999999998764321111100000 000011112223456
Q ss_pred CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
|...|.+++|+|+++++++++.||.|++||+.+++++..+.+|. ..|++++|+|+|++|++++.||.|++||+
T Consensus 1084 ~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~-~~v~~~~~s~dg~~lat~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHN-GCVRCSAFSLDGILLATGDDNGEIRIWNV 1156 (1249)
T ss_dssp CSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCS-SCEEEEEECSSSSEEEEEETTSCCCEEES
T ss_pred cCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCC-CcEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 78889999999999999999999999999999999999999987 89999999999999999999999999995
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-55 Score=445.47 Aligned_cols=422 Identities=10% Similarity=0.078 Sum_probs=331.4
Q ss_pred EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610 74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV 153 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 153 (515)
.....+|.+.|++++|+|++++||+|+.||.|++|+..+.+ ....+ .|..+|.+++|+| +++|++++.|++|++||+
T Consensus 10 ~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~-~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 10 ETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-VVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSL 86 (902)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE-EEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEET
T ss_pred cccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE-EEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEEC
Confidence 34456899999999999999999999999999999998743 33333 4888999999999 789999999999999999
Q ss_pred CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE----------EecCCCCCCeEEEEEcCC-CC
Q psy17610 154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF----------IIPNAHNRGVTALAITQD-GT 222 (515)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~-~~ 222 (515)
++++.+..+. +...|++++|+|++++|++|+.||.|++||+++++... ....+|..+|.+++|+|+ +.
T Consensus 87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 9999988886 66789999999999999999999999999999887641 112578999999999995 57
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeeccc------------------cCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEH------------------TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK 284 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 284 (515)
.+++|+.|+.| +||++.. .....+..| ...|.+++|+|++++|++++.||+|++||+++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEECSSCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEEEeCCCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 89999999999 9999643 344444443 57899999999999999999999999999999
Q ss_pred ceEEEEEE-------------------cCccEEEEEEc----CCC-cEEEEEECC-----CeEEEEeCC-----------
Q psy17610 285 STRLIIMI-------------------LPSMIMSAAYH----PSE-VQLITCSTN-----KMIDYWETC----------- 324 (515)
Q Consensus 285 ~~~~~~~~-------------------~~~~~~~~~~~----~~~-~~l~~~~~~-----~~i~~~d~~----------- 324 (515)
++.+.... +...|.+++|+ |++ ..+++++.+ ..+.+|++.
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 322 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYE 322 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHH
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchh
Confidence 88765421 12369999995 444 456666565 378888842
Q ss_pred -------CCceEEEEecCCCccEEEEEEcC----------CCCEEEEEcCCCeEEEEEccCCeeeee-------------
Q psy17610 325 -------DGSIIRSLEGSDVAAVNCVDFVD----------DGKYFLTGGADQIVKMWMYREGVPCFV------------- 374 (515)
Q Consensus 325 -------~~~~~~~~~~~~~~~i~~~~~~~----------~~~~l~~~~~dg~i~i~d~~~~~~~~~------------- 374 (515)
+.+....+...+...+..+.+.+ +...+++++.||.|++||+.++.....
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~ 402 (902)
T 2oaj_A 323 GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRP 402 (902)
T ss_dssp HHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTT
T ss_pred hhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCC
Confidence 22334444433336777888755 344788889999999999977643321
Q ss_pred ----------------------------ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeee
Q psy17610 375 ----------------------------GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKIS 426 (515)
Q Consensus 375 ----------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 426 (515)
+.+|...+.+++|+|++++|++++.|++|++||+...... ....+....
T Consensus 403 ~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~--~~~~~~~~l- 479 (902)
T 2oaj_A 403 LATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ--DNASFEVNL- 479 (902)
T ss_dssp BEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT--TTBCEEEEH-
T ss_pred CeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcccc--CCceEEeec-
Confidence 2334444555666899999999999999999999876311 000000000
Q ss_pred cccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe--------------------------------
Q psy17610 427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-------------------------------- 474 (515)
Q Consensus 427 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-------------------------------- 474 (515)
.+.....|...|.+++|+|++++||+|+.||+|++||+.+++
T Consensus 480 ------~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (902)
T 2oaj_A 480 ------SRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDV 553 (902)
T ss_dssp ------HHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEEC
T ss_pred ------hhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccc
Confidence 000112577889999999999999999999999999998762
Q ss_pred -------------eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 475 -------------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 475 -------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
++..+.+|. +.|++++||||| +||+|+.||+|++||.
T Consensus 554 ~~~~~~~~~~g~~~~~~l~~h~-~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 554 RDRAPTGVRQGFMPSTAVHANK-GKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp GGGCCTTCSEEEEEEEEECCCS-CSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred cccCCCCCCCccceeEEEEcCC-CcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 466778877 999999999999 9999999999999993
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.4e-55 Score=434.63 Aligned_cols=425 Identities=13% Similarity=0.141 Sum_probs=353.2
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEeeccCccC-eEEEEeCC--CCcEEEEEecCCcEEEEe
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVNTCHTSA-IYDLQFPV--NFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~h~~~-v~~~~~~~--~~~~l~~~~~d~~i~iw~ 152 (515)
.|.+.|++++|+|++++||+++ ++.|++||++++. .....+.+|.+. |.+++|+| ++++|++++.|+.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 5889999999999999999998 7899999999851 345566789999 99999999 999999999999999999
Q ss_pred CCCC--------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610 153 VRTL--------NELLRISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD 220 (515)
Q Consensus 153 ~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 220 (515)
+.++ +.+..+..|...|.+++|+|++++|++++.+ +.|.+|| .++....+ ..|...|.+++|+|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~-~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEV-SGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEEC-CSCSSCEEEEEECSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceee-ecCCccEEEEEECCC
Confidence 9855 6677788899999999999999999999987 6899998 56667666 689999999999999
Q ss_pred CC-EEEEecCCCcEEEEEccCCceeeEEeeccccC---ceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEE----
Q psy17610 221 GT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS---SVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIM---- 291 (515)
Q Consensus 221 ~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~---- 291 (515)
++ .+++++.|+.|++||+ ........+.+|.. .|.+++|+|+ ++++++++.|+.|++||+++++.+..+
T Consensus 172 ~~~~l~~~~~d~~v~vwd~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQG--PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSCEEEEEETTTEEEEEET--TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCcEEEEEeCCCcEEEEeC--CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 97 8999999999999998 45566777888999 9999999999 999999999999999999999998888
Q ss_pred -EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC---CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 292 -ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 292 -~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
.+...+.+++|+ ++.++++++.++.|++||+++++.+..+..+. ...+.++.+. +++++++++.||.|++||+.
T Consensus 250 ~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 250 EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT
T ss_pred cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC
Confidence 566789999999 99999999999999999999999999888662 3567788885 88999999999999999999
Q ss_pred CCeeeeeccCCCCCeeEEEECCC---------------------------------CcEEEEEeCCCcEEEEeCCCCcCc
Q psy17610 368 EGVPCFVGIGHAASITKIKISPD---------------------------------KKVIVSVSADGGIFLWTFPELEDD 414 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~~---------------------------------~~~l~~~~~dg~i~iw~~~~~~~~ 414 (515)
+++++..+.+|...|++++| |+ ++.|++++.|+.+++|++......
T Consensus 328 ~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~ 406 (615)
T 1pgu_A 328 HDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFG 406 (615)
T ss_dssp EEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECS
T ss_pred CCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCccc
Confidence 98888888888877777777 65 445555555555555554332100
Q ss_pred cC---------------------------CCcc---------c----------------ceeeecccccc--cc-eeeec
Q psy17610 415 VG---------------------------DSRS---------L----------------SSKISRSTARS--TR-LIIMI 439 (515)
Q Consensus 415 ~~---------------------------~~~~---------~----------------~~~~~~~~~~~--~~-~~~~~ 439 (515)
.. .... . ........... .. .....
T Consensus 407 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~ 486 (615)
T 1pgu_A 407 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 486 (615)
T ss_dssp SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred CCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCC
Confidence 00 0000 0 00000000000 00 23445
Q ss_pred CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc-cccceEEEEEEcC----------CCcEEEEeecCCeE
Q psy17610 440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVD----------DGKYFLTGGADQIV 508 (515)
Q Consensus 440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~----------~~~~l~s~~~dg~v 508 (515)
|...|.+++|+|++++|++++.||.|++||+.+++++..+.+ |. ..|++++|+| ++++|++++.||.|
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT-SKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS-SCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC-CceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 778899999999999999999999999999999999999988 65 9999999999 99999999999999
Q ss_pred EEEEE
Q psy17610 509 KICLY 513 (515)
Q Consensus 509 ~iw~~ 513 (515)
++|++
T Consensus 566 ~iw~~ 570 (615)
T 1pgu_A 566 FIYSV 570 (615)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99986
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-52 Score=430.62 Aligned_cols=426 Identities=14% Similarity=0.207 Sum_probs=359.4
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD 80 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (515)
|+|+|++.+|++|+.+|.|.+||+.++. ....+.+|
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~--------------------------------------------~~~~~~~~ 54 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQV--------------------------------------------EVRSIQVT 54 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTE--------------------------------------------EEEEEECC
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCc--------------------------------------------eEEEEecC
Confidence 4789999999999999999999977541 12234479
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC-cee
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL-NEL 159 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~ 159 (515)
.++|++++|+|++++|++|+.||.|++||+.++..+ ..+.+|.+.|.+++|+|++++|++++.|+.|++||++++ ...
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV-VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 999999999999999999999999999999997544 455679999999999999999999999999999999987 667
Q ss_pred EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEE
Q psy17610 160 LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIW 236 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw 236 (515)
..+..|...|.+++|+| +++.+++++.||.|++||+.+++....+...+...+.+++|+| ++.++++++.||.|++|
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 77888999999999999 8899999999999999999988887777566668999999999 99999999999999999
Q ss_pred EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcE-EEEEEC
Q psy17610 237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQ-LITCST 314 (515)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-l~~~~~ 314 (515)
|+. .......+.+|...|.+++|+|+++++++++.||.|++||+.+++....+..+ ..+.+++|+|++.. +++.+.
T Consensus 214 d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 291 (814)
T 3mkq_A 214 DYQ--TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF 291 (814)
T ss_dssp ETT--TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE
T ss_pred ECC--CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe
Confidence 995 44567778889999999999999999999999999999999998888877655 58999999999874 245555
Q ss_pred CCeEEEEeCCCCceEEEEe------------------------------------------cCCCccEEEEEEcCCCCEE
Q psy17610 315 NKMIDYWETCDGSIIRSLE------------------------------------------GSDVAAVNCVDFVDDGKYF 352 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~~~------------------------------------------~~~~~~i~~~~~~~~~~~l 352 (515)
++.+.+|++........+. ......+.+++|+|+|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 371 (814)
T 3mkq_A 292 DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV 371 (814)
T ss_dssp TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEE
T ss_pred CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEE
Confidence 6778888876543322221 1122357899999999999
Q ss_pred EEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccc
Q psy17610 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARS 432 (515)
Q Consensus 353 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (515)
++++ ++.+.+|++...... +.+.+.+++|+|+++++++++.+|.+++|+...
T Consensus 372 a~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~---------------------- 423 (814)
T 3mkq_A 372 TVVG-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIKYYKNFK---------------------- 423 (814)
T ss_dssp EEEE-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEEEEETTE----------------------
T ss_pred EEec-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEEEEECCC----------------------
Confidence 9998 899999998654332 346788999999999999999999999996321
Q ss_pred cceeeecCcccEEEeeeccCC---cEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe------e
Q psy17610 433 TRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG------G 503 (515)
Q Consensus 433 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~------~ 503 (515)
.+...+..+.|+|++ .+|++++.|+.|++||+.+++++..+..+. . .++|+|||++|+++ +
T Consensus 424 ------~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~---~v~~s~dg~~la~~~~~~~~~ 493 (814)
T 3mkq_A 424 ------EVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNA-K---DVIWSDNGELVMIVNTNSNGD 493 (814)
T ss_dssp ------ECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCE-E---EEEECTTSSEEEEEECCCSSC
T ss_pred ------CccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCC-C---EEEEcCCCCEEEEEEcCcccC
Confidence 133457888999998 688999999999999999999999998875 2 89999999999999 6
Q ss_pred cCCeEEEE
Q psy17610 504 ADQIVKIC 511 (515)
Q Consensus 504 ~dg~v~iw 511 (515)
.++.+.+|
T Consensus 494 ~~~~~~~~ 501 (814)
T 3mkq_A 494 EASGYTLL 501 (814)
T ss_dssp SCSEEEEE
T ss_pred CceEEEEE
Confidence 66655554
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.4e-51 Score=419.76 Aligned_cols=399 Identities=14% Similarity=0.176 Sum_probs=340.0
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
..+.+|.+.|++++|+|++++||+|+.||.|++||+.++.. ...+.+|.++|.+++|+|++++|++++.|+.|++||+.
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45678999999999999999999999999999999999654 44556799999999999999999999999999999999
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV 233 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i 233 (515)
+++.+..+..|...|.+++|+|++++|++++.||.|++||++++........+|...|.+++|+| +++.+++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999987443333368999999999999 88999999999999
Q ss_pred EEEEccCCceeeEEeec-cccCceEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEE
Q psy17610 234 RIWKLTRESQSLQCVLK-EHTSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQL 309 (515)
Q Consensus 234 ~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 309 (515)
++||+..... ...+. .+...+..++|+| ++.++++++.||.|++||+.+++....+.. ...+.+++|+|+++++
T Consensus 166 ~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 243 (814)
T 3mkq_A 166 KVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (814)
T ss_dssp EEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9999964332 33333 4458899999999 999999999999999999999998888774 4689999999999999
Q ss_pred EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC--EEEEEcCCCeEEEEEccCCee----------ee----
Q psy17610 310 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK--YFLTGGADQIVKMWMYREGVP----------CF---- 373 (515)
Q Consensus 310 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~----------~~---- 373 (515)
++++.||.|++||+.+++.+..+..+. ..+.+++|+|++. +++++. ++.+.+|++..... +.
T Consensus 244 ~~~~~dg~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 321 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGK 321 (814)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCSS-SSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCT
T ss_pred EEEeCCCeEEEEECCCCcEEEEeecCC-CcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcc
Confidence 999999999999999999999988776 7999999999987 455555 66788888754321 11
Q ss_pred -----------------------------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610 374 -----------------------------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK 424 (515)
Q Consensus 374 -----------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 424 (515)
.+..+...+.+++|+|+++++++++ ++.+.+|++.....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~----------- 389 (814)
T 3mkq_A 322 NAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRN----------- 389 (814)
T ss_dssp TSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEE-----------
T ss_pred cccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccc-----------
Confidence 1123455689999999999999998 89999999753210
Q ss_pred eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC---cEEEE
Q psy17610 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG---KYFLT 501 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s 501 (515)
.+.+.+.+++|+|+++++++++.+|.|++|+. +.+|. ..+.+++|+|++ ++|++
T Consensus 390 --------------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~--------~~~~~-~~v~~~~~s~dg~~~~~l~~ 446 (814)
T 3mkq_A 390 --------------KAFGKCQDFVWGPDSNSYALIDETGQIKYYKN--------FKEVT-SWSVPMHSAIDRLFSGALLG 446 (814)
T ss_dssp --------------EEEEECSEEEECTTSSCEEEECTTCCEEEEET--------TEECT-TCCCCCSSCCCEEECSSSEE
T ss_pred --------------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEEC--------CCCcc-ceEEcCCcCccceecceEEE
Confidence 01244789999999999999999999999963 34444 678899999998 68999
Q ss_pred eecCCeEEEEEE
Q psy17610 502 GGADQIVKICLY 513 (515)
Q Consensus 502 ~~~dg~v~iw~~ 513 (515)
++.||.|++||+
T Consensus 447 ~~~d~~v~~~d~ 458 (814)
T 3mkq_A 447 VKSDGFVYFFDW 458 (814)
T ss_dssp EEETTEEEEECT
T ss_pred EecCCEEEEEEC
Confidence 999999999985
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-48 Score=351.66 Aligned_cols=286 Identities=22% Similarity=0.350 Sum_probs=261.3
Q ss_pred CCCCCCeEEEEEcCC----CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610 206 NAHNRGVTALAITQD----GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281 (515)
Q Consensus 206 ~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 281 (515)
.+|...|.+++|+|+ +.+|++|+.|+.|++|++..........+.+|...|.++++++++..+++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 689999999999874 6789999999999999997665566677899999999999999999999999999999999
Q ss_pred cccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610 282 LIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360 (515)
Q Consensus 282 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 360 (515)
+.+++.+..+... ..+.+++|+|+++++++++.++.+++||+++++....+..+. ..+.+++|+|++++|++|+.||.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~dg~ 187 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAIDGI 187 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCCCe
Confidence 9999988877654 478899999999999999999999999999999998888776 78999999999999999999999
Q ss_pred EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL 440 (515)
Q Consensus 361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (515)
|++||+++++.+..+.+|..+|++++|+|++++|++++.|+.|++||++.... ...+.+|
T Consensus 188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~--------------------~~~~~~h 247 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL--------------------AGTLSGH 247 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE--------------------EEEECCC
T ss_pred EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce--------------------eEEEcCC
Confidence 99999999999999999999999999999999999999999999999875421 1234457
Q ss_pred cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|. ..|.+++|+|++++|++++.||.|++||+
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ-DQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 7889999999999999999999999999999999999999987 89999999999999999999999999995
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-48 Score=365.24 Aligned_cols=288 Identities=19% Similarity=0.302 Sum_probs=269.5
Q ss_pred EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610 117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ 196 (515)
Q Consensus 117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 196 (515)
...+.+|.++|++++|+|+++.+++++.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT 276 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 276 (515)
+++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||+. .......+.+|...|.++.++|++.++++++.|++
T Consensus 181 ~~~~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 181 GFECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp SSCEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCceeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC--CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 99988887 6899999999999999999999999999999995 45567778899999999999999999999999999
Q ss_pred EEEEEcccceEEEEEEc-CccEEEEEEcCC--------------------CcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610 277 CVLWDLIKSTRLIIMIL-PSMIMSAAYHPS--------------------EVQLITCSTNKMIDYWETCDGSIIRSLEGS 335 (515)
Q Consensus 277 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~--------------------~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 335 (515)
|++||+.+++....+.. ...+.+++|+|+ +.++++++.|+.|++||+++++++..+.+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 99999999988877754 457999999996 668999999999999999999999999887
Q ss_pred CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
. ..|.+++|+|++++|++++.||.|++||+.+++++..+.+|...|++++|+|++.+|++++.|+.|++|++
T Consensus 338 ~-~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 338 D-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp S-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred C-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 6 88999999999999999999999999999999999999999999999999999999999999999999986
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-48 Score=362.84 Aligned_cols=288 Identities=20% Similarity=0.370 Sum_probs=266.5
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
..+.+|.++|++++|+|++++|++|+.||.|++||+.++. ....+.+|.+.|.+++|+|++++|++++.|++|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4567899999999999999999999999999999999964 455677899999999999999999999999999999999
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ .+|...|.++.++|++.+|++|+.|+.|+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 99999999999999999999999999999999999999999999998888 68999999999999999999999999999
Q ss_pred EEEccCCceeeEEeeccccCceEEEEEecC--------------------CCEEEEEeCCCcEEEEEcccceEEEEEEc-
Q psy17610 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSD--------------------SKEAMSASTDGTCVLWDLIKSTRLIIMIL- 293 (515)
Q Consensus 235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~- 293 (515)
+||+. .......+.+|...|.+++|+|+ +.++++++.|++|++||+++++.+..+..
T Consensus 260 vwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 260 VWVVA--TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEETT--TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECC--CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 99995 44566678899999999999996 67899999999999999999998887764
Q ss_pred CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 294 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 294 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
...+.+++|+|+++++++++.|+.|++||+.+++++..+..|. ..|.+++|+|++.+|++|+.||.|++|+++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS-SCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 4579999999999999999999999999999999999998876 899999999999999999999999999863
No 16
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.1e-48 Score=347.89 Aligned_cols=290 Identities=17% Similarity=0.300 Sum_probs=263.9
Q ss_pred EEEEecCCCcEEEEEEecC----CCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610 74 ALYLLKDDSGISSLQYNPV----NNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 148 (515)
...+.+|.+.|.+++|+|+ +++|++|+.|++|++|++.++.. ....+.+|...|.+++|+|++..+++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 3445689999999999985 67999999999999999987543 344678999999999999999999999999999
Q ss_pred EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG 228 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 228 (515)
++||+.+++.+..+..+...+.+++|+|++++|++++.++.|++|++++++....+ ..|...|.+++|+|++++|++|+
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCEEEEEc
Confidence 99999999999999999889999999999999999999999999999999988877 57888999999999999999999
Q ss_pred CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCc
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEV 307 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~ 307 (515)
.|+.|++||+. +......+.+|..+|.+++|+|++++|++++.|++|++||+++++....+..+ ..+.+++|+|++.
T Consensus 184 ~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 184 IDGIINIFDIA--TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp TTSCEEEEETT--TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCeEEEEECC--CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence 99999999995 45667788999999999999999999999999999999999998888777644 5799999999999
Q ss_pred EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
+|++++.|+.|++||+.+++++..+..+. ..|.+++|+|++++|++++.||.|++||..
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ-DQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEcCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999998876 899999999999999999999999999963
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-47 Score=347.71 Aligned_cols=287 Identities=18% Similarity=0.273 Sum_probs=262.5
Q ss_pred EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610 73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 152 (515)
....+.+|.+.|.+++|+|++++|++|+.||.|++||..++..+ ..+..|...|.+++|+|+++++++++.|+.+++|+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE-EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc-eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34567899999999999999999999999999999999986544 45567999999999999999999999999999999
Q ss_pred CCCCc----eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610 153 VRTLN----ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG 228 (515)
Q Consensus 153 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 228 (515)
+.+++ ....+.+|...+.++.|++++. +++++.|+.|++||+++++....+ .+|...|.+++|+|+++++++|+
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCCEEEEEe
Confidence 98753 4566788999999999998875 899999999999999999998888 68999999999999999999999
Q ss_pred CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEcCC
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPS 305 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~ 305 (515)
.|+.|++||++ .......+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+.++. .+.+++|+|+
T Consensus 204 ~d~~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 204 CDASAKLWDVR--EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp TTSCEEEEETT--TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred CCCcEEEEECC--CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 99999999995 455667788999999999999999999999999999999999988887776543 6999999999
Q ss_pred CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610 306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365 (515)
Q Consensus 306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 365 (515)
++++++++.|+.|++||+.+++.+..+.+|. ..|.+++|+|+|++|++|+.|+.|++||
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecCC-CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999998876 8999999999999999999999999996
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.1e-47 Score=345.48 Aligned_cols=289 Identities=15% Similarity=0.279 Sum_probs=263.6
Q ss_pred eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610 115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT 194 (515)
Q Consensus 115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 194 (515)
.....+.+|.++|.+++|+|++++|++++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCc----eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610 195 PQSGK----LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS 270 (515)
Q Consensus 195 ~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 270 (515)
+.+++ ....+ .+|...|.++.|++++. +++++.|+.|++||+. +......+.+|...|.+++|+|+++++++
T Consensus 126 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 126 LKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIE--TGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp TTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEECC--CCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 98753 33444 68999999999998775 8899999999999995 45567778899999999999999999999
Q ss_pred EeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEEcCC
Q psy17610 271 ASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDD 348 (515)
Q Consensus 271 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~ 348 (515)
++.|++|++||+++++....+.. ...+.+++|+|+++++++++.|+.|++||+++++.+..+.... ...+.+++|+|+
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 99999999999999988887764 4579999999999999999999999999999998887775432 247999999999
Q ss_pred CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610 349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT 407 (515)
Q Consensus 349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~ 407 (515)
|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999999999999996
No 19
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-47 Score=360.22 Aligned_cols=331 Identities=16% Similarity=0.207 Sum_probs=291.0
Q ss_pred eEEEEEecCCCcEEEEEEecCCC-EEEEEecCceEEEEEC----CCCce-----eEEeecc----------CccCeEEEE
Q psy17610 72 VTALYLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDM----NSGFT-----LTLVNTC----------HTSAIYDLQ 131 (515)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~----~~~~~-----~~~~~~~----------h~~~v~~~~ 131 (515)
...+....|.+.|++++|+|+++ +||+|+.||.|++|++ .++.. ....+.. |.+.|.+++
T Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 34556667889999999999999 9999999999999999 87652 2222222 678999999
Q ss_pred eCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC
Q psy17610 132 FPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG 211 (515)
Q Consensus 132 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~ 211 (515)
|+|++++|++++.|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++....+ ..+...
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~ 193 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETG 193 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC---
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccC
Confidence 999999999999999999999 678888999999999999999999999999999999999999999988877 455555
Q ss_pred ---------------eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610 212 ---------------VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT 276 (515)
Q Consensus 212 ---------------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 276 (515)
+.+++|+|++ .+++++.++.|++||+.. ......+..|...|.+++|+|+++++++++.|+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITE--KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp ------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTC--SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred ccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCC--CceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 8999999875 588899999999999964 4555667789999999999999999999999999
Q ss_pred EEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610 277 CVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 277 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
|++||+++++....+. +...+.+++|+|++ .+++++.++.|++||+++++.+..+..+. ..+.+++|+|++++|+++
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDG-VPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTT-CCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCC-ccEEEEEEcCCCCEEEEE
Confidence 9999999988777775 55689999999999 99999999999999999999999988766 899999999999999999
Q ss_pred cCCCeEEEEEccCCe--------------------eeeeccCCCC--CeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610 356 GADQIVKMWMYREGV--------------------PCFVGIGHAA--SITKIKISPDKKVIVSVSADGGIFLWTFP 409 (515)
Q Consensus 356 ~~dg~i~i~d~~~~~--------------------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iw~~~ 409 (515)
+.||.|++||+++++ .+..+..|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 349 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 349 FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 999999999999888 8888999976 99999999999999999999999999985
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.2e-47 Score=339.35 Aligned_cols=292 Identities=20% Similarity=0.246 Sum_probs=262.8
Q ss_pred eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610 115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT 194 (515)
Q Consensus 115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 194 (515)
.+...+.+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeC
Q psy17610 195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSAST 273 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 273 (515)
+.+++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||++.. ......+.+|...|.+++|+| ++..+++++.
T Consensus 84 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 84 YNTGEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCCCcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 9999998888 689999999999999999999999999999999643 345567889999999999999 6789999999
Q ss_pred CCcEEEEEcccceEEEEEEc--CccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610 274 DGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 349 (515)
|++|++||+++......+.. ...+..+.+.| ++.++++++.|+.|++||+++++++..+..|. ..+.+++|+|++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~-~~v~~~~~~p~~ 240 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSFAVFHPTL 240 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC-CCEEEEEECCCC
Confidence 99999999987766555543 35688888876 77899999999999999999999999999887 899999999999
Q ss_pred CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc--EEEEEeCCCcEEEEeCCC
Q psy17610 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK--VIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~iw~~~~ 410 (515)
++|++|+.||.|++||.++++....+..|...+.+++|+|++. ++++++.| .+.+|++..
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 9999999999999999999999999999999999999999875 57777655 577887754
No 21
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-47 Score=360.22 Aligned_cols=342 Identities=16% Similarity=0.226 Sum_probs=289.2
Q ss_pred CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEec----CCCc------eEEEecC--------
Q psy17610 146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTP----QSGK------LKFIIPN-------- 206 (515)
Q Consensus 146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~----~~~~------~~~~~~~-------- 206 (515)
..+.+|+++..........|...|.+++|+|+++ +|++++.||.|++|++ .+++ ....+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS 104 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence 3456888877666666667778999999999999 9999999999999999 8887 3444421
Q ss_pred -CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610 207 -AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS 285 (515)
Q Consensus 207 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 285 (515)
.|...|.+++|+|++++|++++.||.|++||. .......+..|...|.+++|+|+++++++++.|+.|++||+.++
T Consensus 105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK---TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp ---CBCEEEEEECTTSSEEEEEETTSCEEEEET---TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT
T ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC---CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC
Confidence 16779999999999999999999999999994 34566678899999999999999999999999999999999999
Q ss_pred eEEEEEEcCcc----------------EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610 286 TRLIIMILPSM----------------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 286 ~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 349 (515)
+....+..+.. +.+++|+|++ .+++++.++.|++||+.+++.+..+..+. ..+.+++|+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~ 259 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTN 259 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCS-SCEEEEEEETTT
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCC-CceEEEEECCCC
Confidence 88887765543 7888999875 58889999999999999999988888766 899999999999
Q ss_pred CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccc
Q psy17610 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRST 429 (515)
Q Consensus 350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
++|++++.||.|++||+++++....+..|...|.+++|+|++ ++++++.|+.|++||+.....
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~---------------- 322 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL---------------- 322 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----------------
T ss_pred CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----------------
Confidence 999999999999999999999999999999999999999999 999999999999999876421
Q ss_pred ccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe--------------------eeeeecccccc-eEE
Q psy17610 430 ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--------------------IIRSLEGSDVA-AVN 488 (515)
Q Consensus 430 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--------------------~~~~~~~~~~~-~v~ 488 (515)
......+...+.+++|+|++++|++++.||.|++||+.+++ ++..+..|... .|.
T Consensus 323 ----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 398 (425)
T 1r5m_A 323 ----LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF 398 (425)
T ss_dssp ----EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred ----eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence 12223456779999999999999999999999999999888 88999988633 999
Q ss_pred EEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 489 CVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 489 ~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
+++|+|++++|++++.||.|++|++
T Consensus 399 ~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 399 DLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp EEEECTTSSEEEEEESSSCCEEEEC
T ss_pred EEEccCCCceEEEEecCceEEEEee
Confidence 9999999999999999999999996
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.7e-46 Score=340.45 Aligned_cols=288 Identities=18% Similarity=0.274 Sum_probs=261.0
Q ss_pred EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610 73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 152 (515)
....+.+|.+.|++++|+|++++||+|+.||+|++||..++.... .+..|...|.+++|+|++..+++++.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 345678999999999999999999999999999999998865444 4556889999999999999999999999999999
Q ss_pred CCCC------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEE
Q psy17610 153 VRTL------NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRL 224 (515)
Q Consensus 153 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l 224 (515)
+... .....+..|...|.+++|+|++..|++++.|+.|++||+++++.+..+ .+|...|.+++|+| ++++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeCCCCCEE
Confidence 8643 346678889999999999999999999999999999999999998888 68999999999988 57899
Q ss_pred EEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEE
Q psy17610 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAA 301 (515)
Q Consensus 225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~ 301 (515)
++|+.||.|++||++ .......+.+|...|.+++|+|++.++++++.|++|++||++..+....+.... .+.+++
T Consensus 214 ~sgs~Dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMR--SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEeCCCeEEEEECC--CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 999999999999995 445677788999999999999999999999999999999999988777665443 688999
Q ss_pred EcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365 (515)
Q Consensus 302 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 365 (515)
|+|++.++++++.|+.|++||+.+++.+..+..|. ..|.+++|+|+|++|++|+.||.|++|+
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~-~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE-NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC-CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999998888776 8999999999999999999999999995
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.1e-46 Score=335.91 Aligned_cols=291 Identities=16% Similarity=0.267 Sum_probs=258.6
Q ss_pred EEEEecCCCcEEEEEEecCC-CEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610 74 ALYLLKDDSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 148 (515)
...+.+|.+.|++++|+|++ ++|++|+.|++|++|++.+.. .....+.+|...|.+++|+|+++++++++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 34567899999999999965 899999999999999986421 2344677899999999999999999999999999
Q ss_pred EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC------CC
Q psy17610 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD------GT 222 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~ 222 (515)
++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. +....+ .+|...|.++.|.|. +.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATL-LGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEE-CCCSSCEEEEEECCC------CC
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEE-eccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999974 455555 689999999999985 44
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY 302 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (515)
.+++++.|+.|++||++ .......+.+|...|.+++|+|++++|++++.||+|++||+.+++.+..+..+..+.+++|
T Consensus 168 ~l~s~~~d~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 245 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLN--QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAF 245 (319)
T ss_dssp EEEEEETTSCEEEEETT--TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECC--cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEE
Confidence 89999999999999995 4556667889999999999999999999999999999999999999999998899999999
Q ss_pred cCCCcEEEEEECCCeEEEEeCCCCceEEEEecC-------CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610 303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
+|++.+++++..+ .+++|++..+..+..+..+ +...+.+++|+|+|++|++|+.||.|++||+.++
T Consensus 246 sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 246 SPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9999999888765 5999999988877776532 2356889999999999999999999999998764
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9e-46 Score=332.57 Aligned_cols=290 Identities=14% Similarity=0.194 Sum_probs=255.0
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
..+.+|.+.|++++|+|++++|++|+.||.|++||++++.. ...+..|..+|.+++|+|++++|++++.|++|++||+.
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce-eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 34668999999999999999999999999999999999644 44566799999999999999999999999999999999
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV 233 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i 233 (515)
+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++........+|...|.+++|+| ++..|++|+.|+.|
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999988555444479999999999999 67899999999999
Q ss_pred EEEEccCCceeeEEeeccccCceEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEE
Q psy17610 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLI 310 (515)
Q Consensus 234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 310 (515)
++||+...... .....+|...+..+.|.| ++.++++++.|++|++||+++++.+..+..+ ..+..++|+|++.+|+
T Consensus 166 ~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 166 KVWSLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EEEETTCSSCS-EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEEECCCCCcc-ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 99999644322 223346678899999986 6789999999999999999999988888754 5899999999999999
Q ss_pred EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC--EEEEEcCCCeEEEEEccC
Q psy17610 311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK--YFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~i~d~~~ 368 (515)
+++.|+.|++||+.+++.+..+..+. ..+.+++++|++. ++++|+.| .+.+|++.+
T Consensus 245 s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 245 SGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSS-SSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred EEcCCCeEEEEECCCCceeeeccCCC-ccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 99999999999999999999998776 7899999999875 57777755 467777654
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-46 Score=340.21 Aligned_cols=300 Identities=13% Similarity=0.155 Sum_probs=250.2
Q ss_pred EEEecCCC-cEEEEEEecCCCEEEEEecCceEEEEECCCCcee--EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 75 LYLLKDDS-GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL--TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 75 ~~~~~~~~-~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
..+.+|.. .|.+++|+|+|++||+|+.|+.|++||++++... .....+|...|.+++|+|++++|++++.|+++++|
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence 34567887 9999999999999999999999999999886433 23446899999999999999999999999999999
Q ss_pred eCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEE
Q psy17610 152 SVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLS 226 (515)
Q Consensus 152 ~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~ 226 (515)
++.++. .+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.. ...+ ..|...|.+++|+|++++|++
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEE
Confidence 998764 5677889999999999999999999999999999999987643 3344 689999999999999999999
Q ss_pred ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc---------------eEEEEE
Q psy17610 227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS---------------TRLIIM 291 (515)
Q Consensus 227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~~~ 291 (515)
++.|+.|++||...........+.+|...|.+++|+|++++|++++.|++|++||.... +++..+
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL 247 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe
Confidence 99999999999976555666788999999999999999999999999999999996321 222233
Q ss_pred E--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc----e----EEEEecCCCccEEEEEEcCCC-CEEEEEcCCCe
Q psy17610 292 I--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS----I----IRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQI 360 (515)
Q Consensus 292 ~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~----~----~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~ 360 (515)
. +...+.+++|+|++..+++++.|+.|++|+..... + .......+...|++++|+|++ .+|++++.||.
T Consensus 248 ~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 248 SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 2 34579999999999999999999999999986542 1 122223345899999999987 59999999999
Q ss_pred EEEEEccCCeeeeec
Q psy17610 361 VKMWMYREGVPCFVG 375 (515)
Q Consensus 361 i~i~d~~~~~~~~~~ 375 (515)
|++|++.+++.....
T Consensus 328 v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 328 VAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEEEECC-------
T ss_pred EEEEEecCCCCcccc
Confidence 999999887765443
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-46 Score=342.47 Aligned_cols=321 Identities=18% Similarity=0.252 Sum_probs=283.9
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce-
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE- 158 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~- 158 (515)
|.++|.+++|+|+|++++++..++.+..|........... .+|..+|.+++|+|+++++++++ |+.|++||+.+++.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINT-LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEE-ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccccee-ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 5678999999999999999988887777776653333333 46999999999999999999988 99999999987653
Q ss_pred --eEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610 159 --LLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232 (515)
Q Consensus 159 --~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 232 (515)
+..+. .|...+.+++|+|++++|++++.|+.|++||+.+++ ....+ ..|...|.+++|+|+++++++++.|+.
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec-ccCCCceEEEEECCCCCEEEEEeCCCc
Confidence 34444 688899999999999999999999999999999887 44444 578999999999999999999999999
Q ss_pred EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 312 (515)
|++||++ .......+..|...+.+++|+|+++++++++.|+.|++||+++++....+.....+.+++|+|+++.++++
T Consensus 165 v~~~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 165 IAVWDLH--NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCC--CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEE
Confidence 9999995 44566778889999999999999999999999999999999999999999989999999999999999999
Q ss_pred ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc
Q psy17610 313 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK 392 (515)
Q Consensus 313 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 392 (515)
+.++.+++||+.+++.. .+..+. ..+.+++|+|++++|++++.||.|++||+++++.+.. ..|...+.+++|+|+++
T Consensus 243 ~~~~~i~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKY-QLHLHE-SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDK 319 (337)
T ss_dssp ETTSCEEEEETTSSCEE-EECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSC
T ss_pred cCCCcEEEEECCCCCeE-EEcCCc-cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCC
Confidence 99999999999988764 444444 8899999999999999999999999999999887754 46889999999999999
Q ss_pred EEEEEeCCCcEEEEeC
Q psy17610 393 VIVSVSADGGIFLWTF 408 (515)
Q Consensus 393 ~l~~~~~dg~i~iw~~ 408 (515)
+|++++.||.|++|++
T Consensus 320 ~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 320 YIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTSCEEEEEE
T ss_pred EEEEecCCCeEEEEEE
Confidence 9999999999999986
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.8e-46 Score=340.01 Aligned_cols=289 Identities=17% Similarity=0.287 Sum_probs=261.9
Q ss_pred eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610 116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP 195 (515)
Q Consensus 116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 195 (515)
....+.+|.++|.+++|+|++++|++++.|++|++||..+++....+..+...|.+++|+|++.++++++.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC------ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec--CCCE
Q psy17610 196 QSG------KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS--DSKE 267 (515)
Q Consensus 196 ~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~ 267 (515)
... .....+ ..|...|.+++|+|++..|++++.|+.|++||+. .......+.+|...|.+++++| ++++
T Consensus 136 ~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 136 TFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVE--SGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred eccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 643 223334 4799999999999999999999999999999995 4566778899999999999987 4689
Q ss_pred EEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEE
Q psy17610 268 AMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDF 345 (515)
Q Consensus 268 l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~ 345 (515)
|++++.||+|++||+++++.+..+.. ...+.+++|+|++.++++++.|+.|++||++.++.+..+..+. ...+.+++|
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 99999999999999999998887764 4589999999999999999999999999999988877765432 247889999
Q ss_pred cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT 407 (515)
Q Consensus 346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~ 407 (515)
+|++++|++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|++++.|+.|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999995
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-44 Score=326.88 Aligned_cols=293 Identities=20% Similarity=0.350 Sum_probs=265.7
Q ss_pred ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610 114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193 (515)
Q Consensus 114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 193 (515)
..+...+.+|.++|.+++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 46677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST 273 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 273 (515)
|+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||++ .......+..|..+|.+++|+|+++++++++.
T Consensus 93 d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 93 DVSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK--TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp ETTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC--CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999998888 6899999999999999999999999999999995 44566778889999999999999999999999
Q ss_pred CCcEEEEEcccceEEEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc--cEEEEEEcCCC
Q psy17610 274 DGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA--AVNCVDFVDDG 349 (515)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~ 349 (515)
|+.|++||+++++....+.. ...+..++|+|+++++++++.|+.|++||+++++.+..+..+... .+......+++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 99999999999888777643 347899999999999999999999999999999999888876522 12233344688
Q ss_pred CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe--CCCcEEEEeCC
Q psy17610 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVS--ADGGIFLWTFP 409 (515)
Q Consensus 350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iw~~~ 409 (515)
.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|+.|++|+..
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999999999999999999999999999999999999999987 69999999864
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.3e-45 Score=328.85 Aligned_cols=289 Identities=16% Similarity=0.196 Sum_probs=256.2
Q ss_pred eeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCC-----CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610 115 TLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRT-----LNELLRISVMNMICACIVFTYDGKAILSGWNDG 188 (515)
Q Consensus 115 ~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 188 (515)
.+...+.+|.++|.+++|+|++ ++|++++.|++|++|++.. +.++..+.+|...|.+++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3445678999999999999965 7899999999999999864 335678889999999999999999999999999
Q ss_pred eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC----
Q psy17610 189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD---- 264 (515)
Q Consensus 189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---- 264 (515)
.|++||+++++....+ .+|...|.+++|+|++.+|++|+.|+.|++||++ ......+.+|...|.++.+.|.
T Consensus 88 ~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~---~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 88 TLRLWDVATGETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK---GQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp EEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT---SCEEEEECCCSSCEEEEEECCC----
T ss_pred EEEEEECCCCCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCeEEEEeccCCcEEEEEEccCCCCC
Confidence 9999999999998888 6899999999999999999999999999999985 3456677899999999999985
Q ss_pred --CCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEE
Q psy17610 265 --SKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN 341 (515)
Q Consensus 265 --~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~ 341 (515)
+..+++++.|+.|++||+++.+....+. +...+.+++|+|++++|++++.|+.|++||+.+++.+..+..+ ..+.
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~ 241 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVF 241 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEE
Confidence 4489999999999999999988777665 4568999999999999999999999999999999999988865 6899
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc--------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI--------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 342 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
+++|+|++.++++++.+ .+++|++..+..+..+. .|...+.+++|+||+++|++++.||.|++||+.+
T Consensus 242 ~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 242 SLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 99999999999988755 59999998876655543 3466799999999999999999999999999754
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.5e-46 Score=343.51 Aligned_cols=310 Identities=14% Similarity=0.152 Sum_probs=239.0
Q ss_pred cccccccccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEec------CceEEEEECCCCcee---E
Q psy17610 47 KLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTV------NCEIFLIDMNSGFTL---T 117 (515)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~iw~~~~~~~~---~ 117 (515)
.+.......+...|+.+. .....|...|++++|||||++||+|+. |+.|++|+..++... .
T Consensus 18 ~~~~~~g~~~~~~w~~p~----------~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~ 87 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPV----------TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC 87 (357)
T ss_dssp --------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC
T ss_pred eEEecCCCccccccCCCC----------CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe
Confidence 333444445556676532 223469999999999999999999997 788999998775432 2
Q ss_pred EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE----EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL----RISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193 (515)
Q Consensus 118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 193 (515)
....+|...|.+++|+|++ .+++++.|++|+|||+.+++... ...+|...|.+++|+|++++|++++.|+.|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 2334588999999999997 56778889999999999876542 344788999999999999999999999999999
Q ss_pred ecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC-CEEEEE
Q psy17610 194 TPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSA 271 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~ 271 (515)
|+++++.+..+ ..|...|.+++|+|++. ++++++.|+.|++||++............|...+.+++|+|++ .+++++
T Consensus 167 d~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 167 DLSQKAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp ETTTTEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred ECCCCcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 99999999888 68999999999999874 7889999999999999765544444556678889999999974 678899
Q ss_pred eCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC-C
Q psy17610 272 STDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-D 348 (515)
Q Consensus 272 ~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~ 348 (515)
+.|+.|++||+++++....+..+ ..+.+++|+|++ ++|++++.|+.|++||+++++.+..+ .| ...|++++|+| +
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H-~~~V~~vafsP~d 323 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SH-RDFVTGVAWSPLD 323 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CC-SSCEEEEEECSSS
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CC-CCCEEEEEEeCCC
Confidence 99999999999998887777644 579999999987 57889999999999999999877655 34 48999999998 8
Q ss_pred CCEEEEEcCCCeEEEEEccCCe
Q psy17610 349 GKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 349 ~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
+++|++++.||.|++|++.+..
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp TTEEEEEETTSCEEEEECC---
T ss_pred CCEEEEEcCCCeEEEEECCCCC
Confidence 9999999999999999997643
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-45 Score=334.25 Aligned_cols=297 Identities=17% Similarity=0.254 Sum_probs=251.3
Q ss_pred eeEEeeccCcc-CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE---EecCeEEEEEEEeeCCCEEEEEeCCCeE
Q psy17610 115 TLTLVNTCHTS-AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI---SVMNMICACIVFTYDGKAILSGWNDGFI 190 (515)
Q Consensus 115 ~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i 190 (515)
.+...+.+|.. .|.+++|+|+|++|++++.|++|+|||+++++..... .+|...|.+++|+|++++|++++.|+.+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 44556778988 9999999999999999999999999999887644322 4688999999999999999999999999
Q ss_pred EEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecCCCE
Q psy17610 191 RCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSKE 267 (515)
Q Consensus 191 ~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 267 (515)
++|++.++. ....+ .+|...|.+++|+|++++|++++.|+.|++||++... ......+.+|...|.+++|+|++++
T Consensus 86 ~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEECCC-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEccCCCeEEEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 999998774 34555 7899999999999999999999999999999996543 3456678899999999999999999
Q ss_pred EEEEeCCCcEEEEEcccceEE--EEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC---------------ceE
Q psy17610 268 AMSASTDGTCVLWDLIKSTRL--IIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---------------SII 329 (515)
Q Consensus 268 l~~~~~d~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~---------------~~~ 329 (515)
|++++.|++|++||.++++.. ..+. +...+.+++|+|++++|++++.|+.|++||.... +++
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 999999999999999877543 3333 4468999999999999999999999999996321 234
Q ss_pred EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe---------eeeeccCCCCCeeEEEECCCC-cEEEEEeC
Q psy17610 330 RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV---------PCFVGIGHAASITKIKISPDK-KVIVSVSA 399 (515)
Q Consensus 330 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~ 399 (515)
..+...+...|.+++|+|++..|++++.|+.|++|+...+. ......+|...|++++|+|++ .+|++++.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 45555555889999999999999999999999999987542 122346899999999999987 59999999
Q ss_pred CCcEEEEeCCCCc
Q psy17610 400 DGGIFLWTFPELE 412 (515)
Q Consensus 400 dg~i~iw~~~~~~ 412 (515)
||.|++|++...+
T Consensus 325 Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 325 DGEVAFWKYQRPE 337 (345)
T ss_dssp TSCEEEEEECC--
T ss_pred CCcEEEEEecCCC
Confidence 9999999987754
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-46 Score=346.46 Aligned_cols=296 Identities=18% Similarity=0.283 Sum_probs=260.3
Q ss_pred EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610 73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 152 (515)
....+.+|.+.|++++|+|++++|++|+.|++|++||..++.. ...+.+|...|.+++|+|+++++++++.|+.+++||
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~-~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK-THAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-EEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 4456789999999999999999999999999999999998644 455677999999999999999999999999999999
Q ss_pred CCCCc-------eeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCeEEEEEcC-
Q psy17610 153 VRTLN-------ELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQ- 219 (515)
Q Consensus 153 ~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~- 219 (515)
+.+.. ....+.+|...+.++.|.|++ ..|++++.|+.|++||+.+++.+..+. .+|...|.+++|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 87532 344567899999999999974 579999999999999999998877652 57899999999987
Q ss_pred CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc----
Q psy17610 220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---- 295 (515)
Q Consensus 220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---- 295 (515)
++++|++|+.|+.|++||++. .......+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+....
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRI-TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTT-TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CCCEEEEEECCCeEEEEECCC-CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence 889999999999999999963 334566788999999999999999999999999999999999999888775432
Q ss_pred ----cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe---cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 296 ----MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE---GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 296 ----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
.+.+++|+|+++++++++.+|.|++||...++.+..+. ..+...|.+++|+|+|++|++|+.|+.|++|++..
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 37899999999999999999999999999999888773 23448899999999999999999999999999876
Q ss_pred Ce
Q psy17610 369 GV 370 (515)
Q Consensus 369 ~~ 370 (515)
.+
T Consensus 376 ~~ 377 (380)
T 3iz6_a 376 HR 377 (380)
T ss_dssp SS
T ss_pred Cc
Confidence 53
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.9e-45 Score=334.92 Aligned_cols=323 Identities=14% Similarity=0.197 Sum_probs=282.5
Q ss_pred CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF 202 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 202 (515)
|.++|.+++|+|||+.++++..++.+.+|.............|...|.+++|+|+++++++++ ||.|++||+.+++...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 667899999999999999888888777777766656666668999999999999999999998 9999999998765322
Q ss_pred ---Ee-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610 203 ---II-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV 278 (515)
Q Consensus 203 ---~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 278 (515)
.+ ...|...|.+++|+|++++|++++.|+.|++||+..........+..|...+.+++|+|+++++++++.|+.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 22 12788999999999999999999999999999997666556777888999999999999999999999999999
Q ss_pred EEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 279 LWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 279 iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
+||+++++....+.. ...+.+++|+|+++++++++.++.|++||+++++.+..+... ..+.+++|+|+++++++++.
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEET
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcC
Confidence 999999988887764 568999999999999999999999999999999988887643 78999999999999999999
Q ss_pred CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610 358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII 437 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (515)
++.|++||+++++.. .+..|...|.+++|+|++++|++++.||.|++|++...+.. ..
T Consensus 245 ~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~---------------------~~ 302 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI---------------------FQ 302 (337)
T ss_dssp TSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---------------------EE
T ss_pred CCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE---------------------EE
Confidence 999999999887654 56789999999999999999999999999999998765311 12
Q ss_pred ecCcccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610 438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWET 470 (515)
Q Consensus 438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 470 (515)
..+...+.+++|+|++++|++++.||.|++|++
T Consensus 303 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 303 SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 235677999999999999999999999999996
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.7e-46 Score=341.09 Aligned_cols=315 Identities=14% Similarity=0.156 Sum_probs=240.0
Q ss_pred EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec------CCcEEEEeCCCCce-
Q psy17610 86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS------KNDIRIWSVRTLNE- 158 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~- 158 (515)
.+.+.+++.++.. ..+.....|++.... ..+|...|.+++|+|||++|++++. |+.+++|+..++..
T Consensus 10 g~d~g~~~~~~~~-~g~~~~~~w~~p~~~-----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~ 83 (357)
T 4g56_B 10 GVDLGTENLYFQS-NGSSKGSAWGRPVTA-----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN 83 (357)
T ss_dssp ------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C
T ss_pred CCCCCccceEEec-CCCccccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc
Confidence 3455555555444 445678899986521 2459999999999999999999987 67899999877653
Q ss_pred ---eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE---ecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610 159 ---LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI---IPNAHNRGVTALAITQDGTRLLSGGGEGQ 232 (515)
Q Consensus 159 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 232 (515)
......|...|.+++|+|++. +++++.||.|++||+.+++.... ...+|...|.+++|+|++++|++|+.|+.
T Consensus 84 ~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 84 ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 344567888999999999985 56778899999999998765432 12479999999999999999999999999
Q ss_pred EEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEE---cCccEEEEEEcCC-Cc
Q psy17610 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMI---LPSMIMSAAYHPS-EV 307 (515)
Q Consensus 233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~-~~ 307 (515)
|++||++ +......+.+|...|.+++|++++. .+++++.|++|++||+++++....+. ....+.+++|+|+ +.
T Consensus 163 v~iwd~~--~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 163 VKVWDLS--QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp EEEEETT--TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred EEEEECC--CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 9999995 4567778899999999999999875 78899999999999999887765543 2346899999997 46
Q ss_pred EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEE
Q psy17610 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 386 (515)
++++++.++.|++||+++++.+..+..+. ..|++++|+|++ ++|++|+.|+.|+|||+++++.+..+ +|...|++++
T Consensus 241 ~la~g~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va 318 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPDSAQTSAVHS-QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA 318 (357)
T ss_dssp EEEEEESSSCEEEEESSCGGGCEEECCCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE
T ss_pred eEEEeecccceeEEECCCCcEeEEEeccc-eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE
Confidence 88899999999999999999999998876 899999999987 57999999999999999998877655 8999999999
Q ss_pred ECC-CCcEEEEEeCCCcEEEEeCCCC
Q psy17610 387 ISP-DKKVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 387 ~~~-~~~~l~~~~~dg~i~iw~~~~~ 411 (515)
|+| ++++|++++.||+|++|++...
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 998 8999999999999999999764
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=334.39 Aligned_cols=296 Identities=14% Similarity=0.166 Sum_probs=240.1
Q ss_pred EEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-----------CceeEEEEecCeEEEEEE
Q psy17610 105 IFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-----------LNELLRISVMNMICACIV 173 (515)
Q Consensus 105 i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----------~~~~~~~~~~~~~v~~~~ 173 (515)
.+.|++.... ...|...|.+++|+|||+.|++++ |+++++||... .........+...|.+++
T Consensus 16 ~r~w~~~~~~-----~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNA-----PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT 89 (344)
T ss_dssp -------CCS-----CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred ccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence 3567765522 124777899999999998777665 77888887321 112223334667899999
Q ss_pred EeeCCCEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec
Q psy17610 174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK 250 (515)
Q Consensus 174 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 250 (515)
|+|++ .|++++.||.|++||+++++..... ..+|...|++++|+|++++|++|+.|+.|++||+. +......+.
T Consensus 90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~--~~~~~~~~~ 166 (344)
T 4gqb_B 90 WVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA--QQVVLSSYR 166 (344)
T ss_dssp EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--TTEEEEEEC
T ss_pred EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC--CCcEEEEEc
Confidence 99985 6889999999999999988754332 25899999999999999999999999999999994 556778899
Q ss_pred cccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEc---CccEEEEEEcCC-CcEEEEEECCCeEEEEeCCC
Q psy17610 251 EHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPS-EVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 251 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~ 325 (515)
+|...|.+++|++++. .+++++.|++|++||+++++....+.. ...+.+++|+|+ ++++++++.|+.|++||+++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 9999999999999885 688999999999999999887776543 346899999995 56888999999999999999
Q ss_pred CceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc-EEEEEeCCCcE
Q psy17610 326 GSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK-VIVSVSADGGI 403 (515)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i 403 (515)
++++..+..|. ..|++++|+|++ ++|++|+.|++|++||+++++.. .+.+|...|++++|+|+++ +|++++.|++|
T Consensus 247 ~~~~~~~~~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 247 TSCVLSSAVHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp --CCEEEECCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CcEEEEEcCCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 99999999877 899999999997 57999999999999999988755 5679999999999999886 67799999999
Q ss_pred EEEeCCCC
Q psy17610 404 FLWTFPEL 411 (515)
Q Consensus 404 ~iw~~~~~ 411 (515)
++|++...
T Consensus 325 ~~w~v~~~ 332 (344)
T 4gqb_B 325 VHHVVPTE 332 (344)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99999764
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-44 Score=338.06 Aligned_cols=301 Identities=19% Similarity=0.307 Sum_probs=252.0
Q ss_pred EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCc------------------cCeEEEEeCCC
Q psy17610 74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT------------------SAIYDLQFPVN 135 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~ 135 (515)
.....+|.+.|.+++|+|+|++||+|+ ++.+++|++.++..+..+ ..|. ..|.+++|+|+
T Consensus 57 ~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARL-SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEE-CC-----------------CCCCBEEEEEECTT
T ss_pred eEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEe-cCccccccccccccccccCCCceeEEEEEECCC
Confidence 345567999999999999999999987 679999999987655433 3232 24999999999
Q ss_pred CcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEE
Q psy17610 136 FSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL 215 (515)
Q Consensus 136 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~ 215 (515)
+++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ .+...+.++
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~~~~v~~~ 212 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVTTV 212 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE--EcCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999887776 466789999
Q ss_pred EEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610 216 AITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 216 ~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
+|+| ++++|++|+.|+.|++||++... ....+ .+|...|.+++|+|+++++++++.|++|++||+++...
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSETGF--LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCC--EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCc--EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCC
Confidence 9999 89999999999999999996433 33333 57899999999999999999999999999999976543
Q ss_pred EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
...... ...+.+...+..+. ..+.+++|+|++++|++|+.|+.|++||..
T Consensus 291 ~~~~~~-----------------------------~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 291 KSDSKT-----------------------------PNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp ---------------------------------------CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred cccccC-----------------------------CCCCcceEEEeccc-CcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 221100 01223344555555 789999999999999999999999999999
Q ss_pred CCeeeeeccCCCCCeeEEEECC------CCcEEEEEeCCCcEEEEeCCC
Q psy17610 368 EGVPCFVGIGHAASITKIKISP------DKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~dg~i~iw~~~~ 410 (515)
+++++..+.+|...|.+++|++ ++++|++++.||.|++|++..
T Consensus 341 ~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9999999999999999999986 688999999999999999754
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-44 Score=327.27 Aligned_cols=290 Identities=18% Similarity=0.250 Sum_probs=236.4
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEee-cc-CccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVN-TC-HTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~-~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
..+.+|.++|.+++|+|+ +||+|+.|+.|++||+.++. .....+ .+ |..+|.+++|+|++++|++++.|++|+||
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 446689999999999987 99999999999999998752 333333 44 99999999999999999999999999999
Q ss_pred eCCC-------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC----ceEEEecCCCCCCeEEEEEcCC
Q psy17610 152 SVRT-------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG----KLKFIIPNAHNRGVTALAITQD 220 (515)
Q Consensus 152 ~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~ 220 (515)
|++. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||+... +.+..+ .+|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPS 164 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSS
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCC
Confidence 9853 3456778899999999999999999999999999999999432 345555 689999999999999
Q ss_pred CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccc--------eEEEE
Q psy17610 221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKS--------TRLII 290 (515)
Q Consensus 221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~--------~~~~~ 290 (515)
+++|++++.|+.|++||...........+.+|...|.+++|+|+ +..+++++.|++|++||++.+ .....
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence 99999999999999999875555677888999999999999998 678999999999999998764 23333
Q ss_pred EE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc--eEEEEecCCCc-cEEEEEEcC--CCCEEEEEcCCCeEEE
Q psy17610 291 MI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDVA-AVNCVDFVD--DGKYFLTGGADQIVKM 363 (515)
Q Consensus 291 ~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~-~i~~~~~~~--~~~~l~~~~~dg~i~i 363 (515)
+. +...+.+++|++++ .+++++.|+.|++||..+++ ........+.. .+.+++|+| ++++|++|+.||.|++
T Consensus 245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~ 323 (330)
T 2hes_X 245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNF 323 (330)
T ss_dssp CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEE
T ss_pred cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEE
Confidence 32 45689999999765 88999999999999998774 33333223334 899999999 7899999999999999
Q ss_pred EEccC
Q psy17610 364 WMYRE 368 (515)
Q Consensus 364 ~d~~~ 368 (515)
||+++
T Consensus 324 W~~~~ 328 (330)
T 2hes_X 324 WSLEK 328 (330)
T ss_dssp EEC--
T ss_pred EEecc
Confidence 99864
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-44 Score=330.45 Aligned_cols=293 Identities=15% Similarity=0.206 Sum_probs=249.7
Q ss_pred EEEEecCCCcEEEEEE-----ec-CCCEEEEEecCceEEEEECCCCc------eeEEeeccCccCeEEEEeCCCCcEEEE
Q psy17610 74 ALYLLKDDSGISSLQY-----NP-VNNKVFVGTVNCEIFLIDMNSGF------TLTLVNTCHTSAIYDLQFPVNFSSVFA 141 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~-----s~-~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~~ 141 (515)
...+.+|.+.|++++| ++ ++++|++|+.|++|++||+.++. .....+.+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3457789999999999 77 99999999999999999997532 334567889999999999999999999
Q ss_pred EecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCC
Q psy17610 142 TCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQD 220 (515)
Q Consensus 142 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (515)
++.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......... ...|...|.+++|+|+
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999844332221 1368899999999998
Q ss_pred C----------CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEE
Q psy17610 221 G----------TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLI 289 (515)
Q Consensus 221 ~----------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~ 289 (515)
+ .+|++++.|+.|++||.. ......+.+|...|.+++|+|++++|++++.|+.|++||+. ......
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNTN---FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEETT---TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcCC---CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 6 789999999999999952 34556778999999999999999999999999999999994 444445
Q ss_pred EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE--EEec----------CCCccEEEEEEcCCCCEEEEEcC
Q psy17610 290 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--SLEG----------SDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~--~~~~----------~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
.+.....+.+++|+|++.+++++ .++.+++||+.+++... .+.. .+...+.+++|+|+|++|++|+.
T Consensus 251 ~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 251 EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT 329 (343)
T ss_dssp EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence 55566789999999999887655 57789999998876543 3331 23367999999999999999999
Q ss_pred CCeEEEEEccCCe
Q psy17610 358 DQIVKMWMYREGV 370 (515)
Q Consensus 358 dg~i~i~d~~~~~ 370 (515)
||.|++|+++++.
T Consensus 330 Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 330 DGVIRTFSFETSA 342 (343)
T ss_dssp TSEEEEEEEEEEE
T ss_pred CceEEEEEEEccC
Confidence 9999999987653
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-46 Score=346.21 Aligned_cols=304 Identities=18% Similarity=0.254 Sum_probs=262.5
Q ss_pred EEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE
Q psy17610 105 IFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG 184 (515)
Q Consensus 105 i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 184 (515)
+..|+..+ ......+.+|.++|++++|+|++++|++++.|++|+|||+.+++....+..|...|.+++|+|++++|+++
T Consensus 48 ~~~~~~~~-~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 48 AVSFNPTD-LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCCCCCC-CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred ccccccce-eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence 44566555 35566788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEecCCCce------EEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEee-----ccc
Q psy17610 185 WNDGFIRCFTPQSGKL------KFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVL-----KEH 252 (515)
Q Consensus 185 ~~dg~i~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~ 252 (515)
+.|+.+++|++.+... ......+|...+.++.|.|+ +..|++|+.|+.|++||+.... ....+ .+|
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h 204 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGH 204 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSC
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCC
Confidence 9999999999875321 11223689999999999996 4579999999999999996443 33333 578
Q ss_pred cCceEEEEEec-CCCEEEEEeCCCcEEEEEccc-ceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610 253 TSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIK-STRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII 329 (515)
Q Consensus 253 ~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~ 329 (515)
...|.++++++ +++++++++.|++|++||++. .+....+. +...+.+++|+|+++++++++.|+.|++||+++++.+
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 99999999977 889999999999999999974 45555554 4568999999999999999999999999999999998
Q ss_pred EEEecCCC------ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec----cCCCCCeeEEEECCCCcEEEEEeC
Q psy17610 330 RSLEGSDV------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG----IGHAASITKIKISPDKKVIVSVSA 399 (515)
Q Consensus 330 ~~~~~~~~------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~ 399 (515)
..+..+.. ..+.+++|+|+|++|++|+.||.|++||..+++....+ .+|...|++++|+|++++|++++.
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 88765431 24889999999999999999999999999988877666 689999999999999999999999
Q ss_pred CCcEEEEeCCCC
Q psy17610 400 DGGIFLWTFPEL 411 (515)
Q Consensus 400 dg~i~iw~~~~~ 411 (515)
|+.|++|++...
T Consensus 365 D~~i~iW~~~~~ 376 (380)
T 3iz6_a 365 DKNLKIWAFSGH 376 (380)
T ss_dssp TSCEEEEECCSS
T ss_pred CCCEEEEecCCC
Confidence 999999998754
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.8e-44 Score=322.41 Aligned_cols=292 Identities=19% Similarity=0.315 Sum_probs=259.5
Q ss_pred eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
.....+.+|.+.|++++|+|++++|++|+.||.|++|+..+++ ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 3456678999999999999999999999999999999999864 455667899999999999999999999999999999
Q ss_pred eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610 152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 231 (515)
|+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ ..|..+|.+++|+|++++|++++.|+
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999988887 68999999999999999999999999
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc----EEEEEEcCCCc
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM----IMSAAYHPSEV 307 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~ 307 (515)
.|++||+.... ........+...+..++|+|+++++++++.|+.|++||+++++....+..+.. +......+++.
T Consensus 172 ~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 172 LCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp CEEEEETTTCC-EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred cEEEEECCCCc-eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 99999996432 22223345677899999999999999999999999999999998887764431 33333456789
Q ss_pred EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc--CCCeEEEEEcc
Q psy17610 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG--ADQIVKMWMYR 367 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~ 367 (515)
++++++.|+.|++||+.+++.+..+..+. ..+.+++|+|+++++++++ .|+.|++|+.+
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIVQKLQGHT-DVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEEEEECCCS-SCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCCEEEEEECCCchhhhhhhccC-CcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999998876 8899999999999999986 69999999864
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-47 Score=359.90 Aligned_cols=327 Identities=14% Similarity=0.168 Sum_probs=280.2
Q ss_pred CCCcEEEEEEecCCC-EEEEE----------ecCceEEEEECCCCce--eEEeeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610 80 DDSGISSLQYNPVNN-KVFVG----------TVNCEIFLIDMNSGFT--LTLVNTCHTSAIYDLQFPVNFSSVFATCSKN 146 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~-~l~~~----------~~d~~i~iw~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 146 (515)
+...|.+++|+|+++ +|++| +.|+.|++||+.++.. .... ..|...|.+++|+|++++|++++.|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccCC
Confidence 345788999999987 99999 8899999999998642 2222 34889999999999999999999999
Q ss_pred cEEEEeCCC----CceeEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCc------eEEEe--cCCCCCCeE
Q psy17610 147 DIRIWSVRT----LNELLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGK------LKFII--PNAHNRGVT 213 (515)
Q Consensus 147 ~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~------~~~~~--~~~~~~~v~ 213 (515)
.|++||+.+ .+.+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++ ....+ ...|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 4577888899999999999998 8999999999999999999876 32221 257889999
Q ss_pred EEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeeccc------cCceEEEEEecCC-CEEEEEeCCC---cEEEEEc
Q psy17610 214 ALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH------TSSVSVIQIKSDS-KEAMSASTDG---TCVLWDL 282 (515)
Q Consensus 214 ~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~iwd~ 282 (515)
+++|+|+ +.+|++++.|+.|++||++. ......+..+ ...|.+++|+|++ .++++++.|+ .|++||+
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKA--KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTT--TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCC--CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 9999998 78999999999999999964 3445555555 7889999999997 6899999998 9999999
Q ss_pred ccc-eEEEEEE--cCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcC
Q psy17610 283 IKS-TRLIIMI--LPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGA 357 (515)
Q Consensus 283 ~~~-~~~~~~~--~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~ 357 (515)
+++ .....+. +...+.+++|+| +++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|++ .+|++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG-NWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS-SCCCCEEECTTCTTEEEECCS
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC-CceEEEEECCCCCCEEEEEec
Confidence 986 4555554 556899999999 99999999999999999999999999998876 889999999998 89999999
Q ss_pred CCeEEEEEccCCeeeeecc-----------------------------------CCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610 358 DQIVKMWMYREGVPCFVGI-----------------------------------GHAASITKIKISPDKKVIVSVSADGG 402 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~~~~-----------------------------------~~~~~i~~~~~~~~~~~l~~~~~dg~ 402 (515)
||.|++||+.++....... .|..++++++|+|+|++|++++.|+.
T Consensus 327 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~ 406 (416)
T 2pm9_A 327 DNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG 406 (416)
T ss_dssp SSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred CCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence 9999999998765332221 16778889999999999999999999
Q ss_pred EEEEeCCC
Q psy17610 403 IFLWTFPE 410 (515)
Q Consensus 403 i~iw~~~~ 410 (515)
|++|++.+
T Consensus 407 v~~w~~~~ 414 (416)
T 2pm9_A 407 VSITNPKI 414 (416)
T ss_dssp BCCBCCCC
T ss_pred EEEEEecc
Confidence 99999875
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-46 Score=354.85 Aligned_cols=347 Identities=13% Similarity=0.220 Sum_probs=283.9
Q ss_pred CccCeEEEEeCCCCc-EEEEE----------ecCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610 123 HTSAIYDLQFPVNFS-SVFAT----------CSKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDGKAILSGWNDG 188 (515)
Q Consensus 123 h~~~v~~~~~~~~~~-~l~~~----------~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 188 (515)
+...|.+++|+|+++ +++++ +.|+.|++||+.+++ .+..+ .|...|.+++|+|++++|++++.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 445689999999987 77777 679999999999876 33333 5788999999999999999999999
Q ss_pred eEEEEecCC----CceEEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCc------ee-eEEeeccccCce
Q psy17610 189 FIRCFTPQS----GKLKFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRES------QS-LQCVLKEHTSSV 256 (515)
Q Consensus 189 ~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~------~~-~~~~~~~~~~~v 256 (515)
.|++||+.+ .+....+ ..|...|.+++|+|+ +++|++++.|+.|++||+.... .. .......|...|
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp CEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred eEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence 999999987 3455555 689999999999998 8999999999999999997543 11 122346789999
Q ss_pred EEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcCCC-cEEEEEECCC---eEEEEeCC
Q psy17610 257 SVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHPSE-VQLITCSTNK---MIDYWETC 324 (515)
Q Consensus 257 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~l~~~~~~~---~i~~~d~~ 324 (515)
.+++|+|+ +.++++++.|+.|++||+++++....+.. ...+.+++|+|++ .++++++.++ .|++||++
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETT
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCC
Confidence 99999999 78999999999999999999998888876 4679999999997 6899999998 99999999
Q ss_pred CC-ceEEEEe-cCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC-cEEEEEeCC
Q psy17610 325 DG-SIIRSLE-GSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK-KVIVSVSAD 400 (515)
Q Consensus 325 ~~-~~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d 400 (515)
++ .++..+. .+. ..+.+++|+| ++++|++++.||.|++||+++++++..+..|...|.+++|+|++ .+|++++.|
T Consensus 249 ~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 249 NANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp STTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 86 5566666 444 8999999999 99999999999999999999999999999999999999999998 899999999
Q ss_pred CcEEEEeCCCCcCccCCCccc-c-----eeeecc----------cccccceeeecCcccEEEeeeccCCcEEEEeecCCe
Q psy17610 401 GGIFLWTFPELEDDVGDSRSL-S-----SKISRS----------TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM 464 (515)
Q Consensus 401 g~i~iw~~~~~~~~~~~~~~~-~-----~~~~~~----------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 464 (515)
+.|++|++............. . ...... ..... .....+...+..++|+|+|++|++++.|+.
T Consensus 328 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~ 406 (416)
T 2pm9_A 328 NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKG 406 (416)
T ss_dssp SEEEEEESCCCCCSSCC----------------------CCSCCCSSCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred CcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-cCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence 999999998765433221100 0 000000 00000 111225567889999999999999999999
Q ss_pred EEEEecCCC
Q psy17610 465 IDYWETCDG 473 (515)
Q Consensus 465 v~iwd~~~~ 473 (515)
|+||++.+.
T Consensus 407 v~~w~~~~~ 415 (416)
T 2pm9_A 407 VSITNPKIS 415 (416)
T ss_dssp BCCBCCCCC
T ss_pred EEEEEeccC
Confidence 999998764
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.9e-44 Score=328.78 Aligned_cols=290 Identities=16% Similarity=0.186 Sum_probs=244.8
Q ss_pred eEEeeccCccCeEEEEe-----CC-CCcEEEEEecCCcEEEEeCCCC-------ceeEEEEecCeEEEEEEEeeCCCEEE
Q psy17610 116 LTLVNTCHTSAIYDLQF-----PV-NFSSVFATCSKNDIRIWSVRTL-------NELLRISVMNMICACIVFTYDGKAIL 182 (515)
Q Consensus 116 ~~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~ 182 (515)
....+.+|.+.|++++| ++ ++++|++++.|++|++||+.+. .+...+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 44567889999999999 76 8999999999999999999753 35667889999999999999999999
Q ss_pred EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEe
Q psy17610 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK 262 (515)
Q Consensus 183 ~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~ 262 (515)
+++.|+.|++||+++++....+ .+|...|.+++|+|++++|++++.|+.|++||+............+|...|.+++|+
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEE-ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EEcCCCcEEEEECCCCcEEEEE-cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 9999999999999999998887 689999999999999999999999999999999632222222233788999999999
Q ss_pred cCC----------CEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEE
Q psy17610 263 SDS----------KEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIR 330 (515)
Q Consensus 263 ~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~ 330 (515)
|++ .++++++.|+.|++||.. .+....+ .+...+.+++|+|++++|++++.|+.|++||+. ......
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 987 789999999999999954 4444444 455689999999999999999999999999994 444455
Q ss_pred EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee--ecc-----------CCCCCeeEEEECCCCcEEEEE
Q psy17610 331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF--VGI-----------GHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~l~~~ 397 (515)
.+... ..+.+++|+|++++++++. |+.+++|++.+++... .+. +|...|.+++|+|++++|+++
T Consensus 251 ~~~~~--~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg 327 (343)
T 2xzm_R 251 EFDAG--STINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAG 327 (343)
T ss_dssp EEECS--SCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEE
T ss_pred eecCC--CcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEe
Confidence 55433 5799999999999887664 7789999998765433 332 688899999999999999999
Q ss_pred eCCCcEEEEeCCC
Q psy17610 398 SADGGIFLWTFPE 410 (515)
Q Consensus 398 ~~dg~i~iw~~~~ 410 (515)
+.||.|++|++.+
T Consensus 328 ~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 328 FTDGVIRTFSFET 340 (343)
T ss_dssp ETTSEEEEEEEEE
T ss_pred cCCceEEEEEEEc
Confidence 9999999999754
No 44
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.3e-45 Score=330.29 Aligned_cols=286 Identities=12% Similarity=0.116 Sum_probs=233.6
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCC----------CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS----------GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 148 (515)
.|...|.+++|+|||++|++++ |+++++||... ..........|...|.+++|+|++ .+++++.||+|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4778899999999999998887 66777776321 011111122366789999999995 78899999999
Q ss_pred EEEeCCCCceeEEE----EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC-CE
Q psy17610 149 RIWSVRTLNELLRI----SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG-TR 223 (515)
Q Consensus 149 ~iw~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 223 (515)
+|||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++ .+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCCc
Confidence 99999998865543 478999999999999999999999999999999999999888 7999999999999987 47
Q ss_pred EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEE
Q psy17610 224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAA 301 (515)
Q Consensus 224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~ 301 (515)
|++++.|+.|++||++............|...+.+++|+|+ ++++++++.||+|++||+++++.+..+.. ...+.+++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 89999999999999975544333334456678999999985 56788999999999999999988887765 45899999
Q ss_pred EcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCC
Q psy17610 302 YHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 302 ~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 369 (515)
|+|++ ++|++++.|+.|++||+.+++.. .+.+|. ..|++++|+|+++ +|++++.|++|++|++.+.
T Consensus 265 fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 265 FSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHR-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCC-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99998 57899999999999999988765 455554 8999999999886 6778999999999999764
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-45 Score=347.48 Aligned_cols=352 Identities=13% Similarity=0.129 Sum_probs=289.9
Q ss_pred EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS 163 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 163 (515)
+++++|+|++++|++++.|+.|++||..++. ....+..| ..+....|+|++++|++++.|+.|++||+.+++....+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRD-GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEE-TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccc-eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 4589999999999999999999999998843 33344444 445555789999999999999999999999988888778
Q ss_pred ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce
Q psy17610 164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ 243 (515)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 243 (515)
.|...|.+++|+|++++|++++.|+.|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||++. .
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~--~ 213 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT--G 213 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT--T
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC--C
Confidence 89999999999999999999999999999999999988887 68999999999999999999999999999999964 3
Q ss_pred eeEEeec---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610 244 SLQCVLK---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320 (515)
Q Consensus 244 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 320 (515)
.....+. .|...+.++++.+.+...+. ......+.+++|+|+++++++++.++.|++
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLH--------------------EISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCG--------------------GGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceee--------------------ecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 4444554 46778888888876543210 012345778899999999999999999999
Q ss_pred EeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCee-eeeccC-CCCCeeEEEECCCCcEEEEE
Q psy17610 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREGVP-CFVGIG-HAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~ 397 (515)
||+++++.+..+...+...+.+++|+|+++ +|++|+.||.|++||+++++. +..+.. |...|.++.+ +++++|+++
T Consensus 274 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~ 352 (420)
T 3vl1_A 274 HNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSS 352 (420)
T ss_dssp EETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEE
T ss_pred EECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEe
Confidence 999999999888876668999999999999 999999999999999998743 666665 6778888855 578899999
Q ss_pred eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc---EEEEeecCCeEEEEecCC
Q psy17610 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV---QLITCSTNKMIDYWETCD 472 (515)
Q Consensus 398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~v~iwd~~~ 472 (515)
+.|+.|++|++.......... ..........+...+.+++|+|+++ .+++.+.+|.+.+|++++
T Consensus 353 ~~d~~v~iw~~~~~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPESERPAI-----------EFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTCCSCEE-----------CTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCCCccce-----------eccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 999999999988743211110 0111223445677899999999999 777778899999999864
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-44 Score=340.94 Aligned_cols=340 Identities=15% Similarity=0.187 Sum_probs=286.8
Q ss_pred CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610 1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD 80 (515)
Q Consensus 1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (515)
++|+|++++|++|+.+|.|.+||+.+.+....+ ..|
T Consensus 62 ~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~--------------------------------------------~~~ 97 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML--------------------------------------------KRA 97 (420)
T ss_dssp CEEEEEETTEEEEEETTEEEEEECCSEETTTTS--------------------------------------------CSC
T ss_pred eeeeecCCeEEEEEcCCcEEEEEecccceeeEE--------------------------------------------ecC
Confidence 468899999999999999999997764211110 012
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL 160 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 160 (515)
..+...+|+|++++||+|+.||.|++||+.++ .....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 98 -~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 98 -DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp -CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred -CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 44555678999999999999999999999985 5556667899999999999999999999999999999999999999
Q ss_pred EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC--CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610 161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN--AHNRGVTALAITQDGTRLLSGGGEGQVRIWKL 238 (515)
Q Consensus 161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 238 (515)
.+.+|...|.+++|+|++++|++++.|+.|++||+++++....+.. .|...+.+++|.+.+...
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-------------- 241 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ-------------- 241 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS--------------
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce--------------
Confidence 9999999999999999999999999999999999999998887742 467788888887654321
Q ss_pred cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc--CccEEEEEEcCCCc-EEEEEECC
Q psy17610 239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHPSEV-QLITCSTN 315 (515)
Q Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~~~~ 315 (515)
....+...+.+++|+|+++++++++.||.|++||+++++....+.. ...+.+++|+|++. ++++++.|
T Consensus 242 ---------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 242 ---------LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp ---------CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred ---------eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence 1234567788999999999999999999999999999988777753 45799999999998 99999999
Q ss_pred CeEEEEeCCCCce-EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC---------eeeeeccCCCCCeeEE
Q psy17610 316 KMIDYWETCDGSI-IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG---------VPCFVGIGHAASITKI 385 (515)
Q Consensus 316 ~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~i~~~ 385 (515)
+.|++||+++++. +..+..++...+.++.+ +++++|++++.||.|++|++... .....+..|...|.++
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 391 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQF 391 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEE
T ss_pred CeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEE
Confidence 9999999998754 77888766678888855 57889999999999999998763 1223456788999999
Q ss_pred EECCCCc---EEEEEeCCCcEEEEeCCC
Q psy17610 386 KISPDKK---VIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 386 ~~~~~~~---~l~~~~~dg~i~iw~~~~ 410 (515)
+|+|+++ .+++++.+|.+.+|++..
T Consensus 392 ~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 392 CYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEccCCCCcceEEEEcCCceEEEEeccC
Confidence 9999999 778888999999999864
No 47
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.3e-43 Score=319.80 Aligned_cols=293 Identities=17% Similarity=0.298 Sum_probs=260.6
Q ss_pred EEEecCCCcEEEEEEecC-CCEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610 75 LYLLKDDSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR 149 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 149 (515)
..+.+|.+.|++|+|+|+ +++||+|+.|++|++||+.+++ .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 357799999999999997 6899999999999999997643 23456788999999999999999999999999999
Q ss_pred EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC--CEEEEe
Q psy17610 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG--TRLLSG 227 (515)
Q Consensus 150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~ 227 (515)
+|+............+...+..+.+++++++|++++.|+.+++||............+|...+..++|++++ .+++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 999999988888888888999999999999999999999999999988777666667899999999998854 578899
Q ss_pred cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCc
Q psy17610 228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV 307 (515)
Q Consensus 228 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (515)
+.|+.|++||+. .......+.+|...|.+++|+|++++|++++.|+.|++||+++.+.+..+.....+..++++|++.
T Consensus 192 ~~d~~i~i~d~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 269 (340)
T 4aow_A 192 GWDKLVKVWNLA--NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY 269 (340)
T ss_dssp ETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS
T ss_pred cCCCEEEEEECC--CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc
Confidence 999999999995 456677788999999999999999999999999999999999999999999999999999999876
Q ss_pred EEEEEECCCeEEEEeCCCCceEEEEec--------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610 308 QLITCSTNKMIDYWETCDGSIIRSLEG--------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
.+ +++.|+.|++||++++..+..+.. .+...|++++|+|+|++|++|+.||.|+|||+++|+
T Consensus 270 ~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 270 WL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 55 556789999999999887776653 234789999999999999999999999999999875
No 48
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-43 Score=327.64 Aligned_cols=294 Identities=21% Similarity=0.364 Sum_probs=247.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecccc------------------CceEEEEEecCCCEE
Q psy17610 207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT------------------SSVSVIQIKSDSKEA 268 (515)
Q Consensus 207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l 268 (515)
.|...|.+++|+|+|++|++|+ ++.+++|++... .....+..|. ..|.+++|+|++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 5999999999999999999987 689999999543 3333343332 248999999999999
Q ss_pred EEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610 269 MSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347 (515)
Q Consensus 269 ~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (515)
++++.|+.|++||+.+++....+.. ...+.+++|+|++.++++++.|+.|++||+++++....+..+ ..+.+++++|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~ 216 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE--DGVTTVAVSP 216 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECS
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC--CCcEEEEEEC
Confidence 9999999999999999988877764 457999999999999999999999999999999988887754 6799999999
Q ss_pred -CCCEEEEEcCCCeEEEEEccCCeeeeec-------cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCc
Q psy17610 348 -DGKYFLTGGADQIVKMWMYREGVPCFVG-------IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR 419 (515)
Q Consensus 348 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 419 (515)
++++|++|+.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+...........
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 8999999999999999999998877665 57999999999999999999999999999999976532111000
Q ss_pred ccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcC-----
Q psy17610 420 SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD----- 494 (515)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~----- 494 (515)
...........+|...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|. ..|.+++|++
T Consensus 297 --------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~-~~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 297 --------PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR-NSVISVAVANGSSLG 367 (393)
T ss_dssp ------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSSCTTC
T ss_pred --------CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC-CCEEEEEecCCcCcC
Confidence 00111223455788889999999999999999999999999999999999999997 8999999986
Q ss_pred -CCcEEEEeecCCeEEEEEEe
Q psy17610 495 -DGKYFLTGGADQIVKICLYI 514 (515)
Q Consensus 495 -~~~~l~s~~~dg~v~iw~~~ 514 (515)
++++|++|+.||+|++|++-
T Consensus 368 p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEECCCCcEEECccc
Confidence 78999999999999999974
No 49
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=321.03 Aligned_cols=292 Identities=17% Similarity=0.247 Sum_probs=236.9
Q ss_pred eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEE-Ee-cCeEEEEEEEeeCCCEEEEEeCCCeE
Q psy17610 115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRI-SV-MNMICACIVFTYDGKAILSGWNDGFI 190 (515)
Q Consensus 115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg~i 190 (515)
.+...+.+|.++|.+++|+|+ .|++++.|++|++||+.++. .+..+ .. |...|.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 445567789999999999998 89999999999999998753 34444 23 88899999999999999999999999
Q ss_pred EEEecCC-------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC--ceeeEEeeccccCceEEEEE
Q psy17610 191 RCFTPQS-------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE--SQSLQCVLKEHTSSVSVIQI 261 (515)
Q Consensus 191 ~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~ 261 (515)
++||++. .+....+ .+|...|.+++|+|++++|++|+.|+.|++||++.. .......+.+|...|.+++|
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 9999853 2344555 689999999999999999999999999999999532 23556678899999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEEcccc--eEEEEEE-cCccEEEEEEcCC--CcEEEEEECCCeEEEEeCCCC--------ce
Q psy17610 262 KSDSKEAMSASTDGTCVLWDLIKS--TRLIIMI-LPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDG--------SI 328 (515)
Q Consensus 262 ~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~--------~~ 328 (515)
+|++.+|++++.|++|++||..++ +++..+. +...+.+++|+|+ +..+++++.|+.|++||+..+ ..
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence 999999999999999999998766 4555554 4468999999998 678999999999999998764 33
Q ss_pred EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe--eee-eccCCCC-CeeEEEECC--CCcEEEEEeCCCc
Q psy17610 329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV--PCF-VGIGHAA-SITKIKISP--DKKVIVSVSADGG 402 (515)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~-~~~~~~~-~i~~~~~~~--~~~~l~~~~~dg~ 402 (515)
...+...+...|.+++|++++ +|++++.||.|++||..+++ ... ...+|.. .|.+++|+| ++++|++++.||.
T Consensus 242 ~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 242 EAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp EEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred eeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc
Confidence 444444355899999999765 79999999999999998773 332 3467877 899999999 7899999999999
Q ss_pred EEEEeCCC
Q psy17610 403 IFLWTFPE 410 (515)
Q Consensus 403 i~iw~~~~ 410 (515)
|++|++..
T Consensus 321 v~~W~~~~ 328 (330)
T 2hes_X 321 VNFWSLEK 328 (330)
T ss_dssp EEEEEC--
T ss_pred EEEEEecc
Confidence 99999754
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-45 Score=349.67 Aligned_cols=351 Identities=8% Similarity=0.053 Sum_probs=250.3
Q ss_pred EEEecCCCcEEEEEEecCC---------CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC
Q psy17610 75 LYLLKDDSGISSLQYNPVN---------NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK 145 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~---------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 145 (515)
.....+.+.|.+|+|+|++ ++||+|+.++.. -..+|+++.+++++.|
T Consensus 127 ~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------------~~~~~~~~~laS~s~D 182 (524)
T 2j04_B 127 GFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------------EPLNEHLEMFDKEKHS 182 (524)
T ss_dssp EEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------C
T ss_pred eEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------------CccchhhhhhccCCCC
Confidence 3345578999999999987 799999877420 0137899999999999
Q ss_pred CcEEEEeCCCCcee----EEEEecCeEEEEEEEeeC------CCEEEEEeCCCeEEEEecCCCce-----------EEEe
Q psy17610 146 NDIRIWSVRTLNEL----LRISVMNMICACIVFTYD------GKAILSGWNDGFIRCFTPQSGKL-----------KFII 204 (515)
Q Consensus 146 ~~i~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~~~~~~~~~~-----------~~~~ 204 (515)
++|+|||+.+++.. ..+..|.+.|.+++|+|+ +.+|++++.||+|++||+.+++. ...+
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l 262 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL 262 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence 99999999887643 345667888999999997 57999999999999999987642 1233
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEE--EEecCC-CEEEEEeCCCcEEEEE
Q psy17610 205 PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI--QIKSDS-KEAMSASTDGTCVLWD 281 (515)
Q Consensus 205 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~iwd 281 (515)
.+|...|++++|++++ .|++|+.||+|++||++.. ..+...+.+|...|.++ .|+|++ .+|++++.|++|++||
T Consensus 263 -~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 263 -SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp -CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred -EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 5799999999999864 8999999999999999643 23345578899999999 567887 8899999999999999
Q ss_pred cccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEEcCCCCEEEEEcCCCe
Q psy17610 282 LIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGADQI 360 (515)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~ 360 (515)
+++++....+ ..+. ...+.+++|+|+++.+++++.|++
T Consensus 340 ~~~~~~~~~~-----------------------------------------~~~~~~~~v~~v~fsp~~~~l~s~~~d~t 378 (524)
T 2j04_B 340 PKDIATTKTT-----------------------------------------VSRFRGSNLVPVVYCPQIYSYIYSDGASS 378 (524)
T ss_dssp GGGHHHHCEE-----------------------------------------EEECSCCSCCCEEEETTTTEEEEECSSSE
T ss_pred CCCCCccccc-----------------------------------------ccccccCcccceEeCCCcCeEEEeCCCCc
Confidence 8775432211 1111 024678999999999999999999
Q ss_pred EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL 440 (515)
Q Consensus 361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (515)
|++||++++..+..+.+|...|++++|+|++++|++|+.|++|++|++..... ...... .....
T Consensus 379 v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~-----~~~~~~-----------~~~~~ 442 (524)
T 2j04_B 379 LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL-----HGIKNS-----------SATQK 442 (524)
T ss_dssp EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT-----TCC-----------------CC
T ss_pred EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc-----cccccC-----------cccee
Confidence 99999999988888889999999999999999999999999999999754210 000000 00001
Q ss_pred cccEEEeeeccCCcEEEEeecCCeEEEEecC-CCeeeeeecccccceEEEEEEcCCCc---EEEEeecCCeEEEEEE
Q psy17610 441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGK---YFLTGGADQIVKICLY 513 (515)
Q Consensus 441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~v~iw~~ 513 (515)
...+..++|+|+++.+.. .. .+++|+.. ++.++..+.+|. .+|.+++|+|+++ +||+|+.||+||||++
T Consensus 443 ~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~gh~-~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDAHG-INITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp CCEEEECBCCSSSCEEEE-CC--CCCCCC-------------CC-CSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred eeEEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecCCC-ceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 124778999999985533 22 23444433 577888899887 8999999999965 9999999999999986
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-42 Score=321.27 Aligned_cols=300 Identities=15% Similarity=0.211 Sum_probs=269.9
Q ss_pred ccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610 69 SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148 (515)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 148 (515)
-.......+.+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 3446778899999999999999999999999999999999999864 445667799999999999999999999999999
Q ss_pred EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCce-----------EEEecCCCCC--
Q psy17610 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGKL-----------KFIIPNAHNR-- 210 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~-----------~~~~~~~~~~-- 210 (515)
++||+.+++.+..+. +...+.+++|+|+++++++++.+ +.|.+||+..+.. ...+ ..|..
T Consensus 99 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 176 (369)
T 3zwl_B 99 KLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEGLD 176 (369)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTTCC
T ss_pred EEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-cCCcCcc
Confidence 999999999988888 88899999999999999999998 9999999876532 2222 24444
Q ss_pred CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610 211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 290 (515)
.+.+++|+|++++|++++.||.|++||+... ......+..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 8999999999999999999999999999642 456677888999999999999999999999999999999999999999
Q ss_pred EEcCccEEEEEEcCCCcEEEEEECCC--------------eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610 291 MILPSMIMSAAYHPSEVQLITCSTNK--------------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 356 (515)
+.....+..++|+|+++++++++.++ .+++||..+++.+..+..+. ..|.+++|+|++++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 256 YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF-GPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEE
T ss_pred ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc-CcEEEEEECCCCCEEEEEc
Confidence 99889999999999999999999988 89999999999999998876 8999999999999999999
Q ss_pred CCCeEEEEEccCCeeee
Q psy17610 357 ADQIVKMWMYREGVPCF 373 (515)
Q Consensus 357 ~dg~i~i~d~~~~~~~~ 373 (515)
.||.|++|+++.+....
T Consensus 335 ~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 335 EDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp TTSEEEEEEECHHHHTC
T ss_pred CCCeEEEEECccccchh
Confidence 99999999998764433
No 52
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.1e-41 Score=323.93 Aligned_cols=319 Identities=19% Similarity=0.343 Sum_probs=281.0
Q ss_pred EEEecCCCcE-EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610 75 LYLLKDDSGI-SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV 153 (515)
Q Consensus 75 ~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 153 (515)
..+.+|.+.| +++ ++++++|++|+.||.|++||+.+++ ....+.+|.+.|.+++|+ +..+++++.|++|++||+
T Consensus 112 ~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 112 KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGK-CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp EEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCC-EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred EEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCc-EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEEC
Confidence 4567898875 554 4568999999999999999999965 455667899999999998 459999999999999999
Q ss_pred CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610 154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV 233 (515)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 233 (515)
.+++.+..+.+|...|.++.|+ ++.+++++.||.|++||+.+++....+ .+|...|.+++| +++++++++.||.|
T Consensus 187 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 187 ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMV 261 (445)
T ss_dssp TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCE
T ss_pred CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEE
Confidence 9999999999999999999985 678999999999999999999998887 689999999999 67899999999999
Q ss_pred EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEE
Q psy17610 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 312 (515)
++||++ .......+.+|...|.++.| ++.++++++.|+.|++||+++++....+..+ ..+.++.+ ++++++++
T Consensus 262 ~iwd~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 335 (445)
T 2ovr_B 262 KVWDPE--TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSG 335 (445)
T ss_dssp EEEEGG--GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEE
T ss_pred EEEECC--CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEE
Confidence 999995 45667778899999999998 7899999999999999999999988877654 35666665 56799999
Q ss_pred ECCCeEEEEeCCCCceEEEEecC--CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec-----cCCCCCeeEE
Q psy17610 313 STNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG-----IGHAASITKI 385 (515)
Q Consensus 313 ~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~ 385 (515)
+.|+.|++||+++++.+..+..+ +...+.+++|+ ++++++|+.||.|++||+.+++.+..+ .+|...|.++
T Consensus 336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 413 (445)
T 2ovr_B 336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 413 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence 99999999999999999998862 34789999996 579999999999999999999888777 5788999999
Q ss_pred EECCCCcEEEEEeCCCc----EEEEeCCCC
Q psy17610 386 KISPDKKVIVSVSADGG----IFLWTFPEL 411 (515)
Q Consensus 386 ~~~~~~~~l~~~~~dg~----i~iw~~~~~ 411 (515)
+|+|++.++++++.||+ +.+||+...
T Consensus 414 ~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 414 RASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999999999998 999998753
No 53
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.1e-42 Score=314.02 Aligned_cols=303 Identities=15% Similarity=0.254 Sum_probs=256.0
Q ss_pred EEEEECCCC-ceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCCCc-----eeEEEEecCeEEEEEEEeeC
Q psy17610 105 IFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRTLN-----ELLRISVMNMICACIVFTYD 177 (515)
Q Consensus 105 i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~ 177 (515)
++++...+. ..+...++||.+.|++++|+|+ +++|++++.|++|+|||+.+.+ +...+.+|...|.+++|+|+
T Consensus 18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence 444444332 2455578999999999999998 5789999999999999997654 45667889999999999999
Q ss_pred CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610 178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS 257 (515)
Q Consensus 178 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~ 257 (515)
+++|++++.|+.|++|+.......... ..+...+....+++++++|++++.|+.+++||... .........+|...+.
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~-~~~~~~~~~~~~~~v~ 175 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG-VCKYTVQDESHSEWVS 175 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEECSSSCSSCEE
T ss_pred CCEEEEEcccccceEEeecccceeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeCC-CceEEEEeccccCccc
Confidence 999999999999999999998887776 57888899999999999999999999999999863 3444556778999999
Q ss_pred EEEEecCC--CEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec
Q psy17610 258 VIQIKSDS--KEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG 334 (515)
Q Consensus 258 ~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 334 (515)
.++|++++ ..+++++.|+.|++||+++++....+.. ...+.+++|+|++++|++++.|+.|++||+++.+.+..+..
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 99998764 5688999999999999999988887764 45899999999999999999999999999999999998887
Q ss_pred CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec---------cCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610 335 SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG---------IGHAASITKIKISPDKKVIVSVSADGGIFL 405 (515)
Q Consensus 335 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 405 (515)
+ ..+.++.|+|++.++ +++.|+.|++||++++..+..+ .+|...|++++|+|++++|++++.||.|++
T Consensus 256 ~--~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 256 G--DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp S--SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred C--ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 6 689999999988755 5556899999999887665544 368899999999999999999999999999
Q ss_pred EeCCCCc
Q psy17610 406 WTFPELE 412 (515)
Q Consensus 406 w~~~~~~ 412 (515)
||+.++.
T Consensus 333 W~~~tGt 339 (340)
T 4aow_A 333 WQVTIGT 339 (340)
T ss_dssp EEEEC--
T ss_pred EeCCCcC
Confidence 9987653
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=335.26 Aligned_cols=360 Identities=13% Similarity=0.172 Sum_probs=273.8
Q ss_pred EEEE-ecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCC---CceeE-EeeccCccCeEEEEeCCCCcEEEEEecCCc
Q psy17610 74 ALYL-LKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNS---GFTLT-LVNTCHTSAIYDLQFPVNFSSVFATCSKND 147 (515)
Q Consensus 74 ~~~~-~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~---~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 147 (515)
...+ .+|.+.|++++|+| ++++||+|+.||.|++||+.+ +.... ....+|..+|.+++|+|+++.|++++.|+.
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 3344 67899999999999 999999999999999999876 33221 112249999999999999999999999999
Q ss_pred EEEEeCC---CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE--EcCCCC
Q psy17610 148 IRIWSVR---TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA--ITQDGT 222 (515)
Q Consensus 148 i~iw~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~ 222 (515)
|++||++ +++.+..+..+ .+..+.|+|++ +...+.++. +++++.
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG-----------------------------KNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS-----------------------------SCCCEEEEEEEECSSCE
T ss_pred EEEEEeccccCCceeeccccc--eeEEEEccCcc-----------------------------cccCceEEEEEEcCCCC
Confidence 9999995 66666655544 56666666653 334455555 668999
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeecc--ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEE
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE--HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIM 298 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~ 298 (515)
+|++++.|+.|++||++. ......+.+ |...|.+++|+|+++++++++.||.|++||+++++.+..+. +...+.
T Consensus 184 ~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRT--LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp EEEEEETTSEEEEEETTT--CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred EEEEEeCCCeEEEEeCCC--CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 999999999999999954 445566666 89999999999999999999999999999999999888774 455799
Q ss_pred EEEEcC----CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610 299 SAAYHP----SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV 374 (515)
Q Consensus 299 ~~~~~~----~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 374 (515)
+++++| ++.++++++.|+.|++||+++++.+..+..+. ..+..+.|+|+++.+ .+. .
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l----~~~--------------~ 322 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD-EQPSMEHFLPIEKGL----EEL--------------N 322 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS-SCCCGGGGSCBCSSG----GGC--------------C
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC-CCCccceeccccccc----ccc--------------e
Confidence 996654 67899999999999999999999999999876 677778888887655 111 1
Q ss_pred ccC--CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC
Q psy17610 375 GIG--HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS 452 (515)
Q Consensus 375 ~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 452 (515)
+.+ |...|++++|+ ++++|++++.|+.|++||+...+....... . ......+....+++.
T Consensus 323 ~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~ 384 (437)
T 3gre_A 323 FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS--------P---------SRFSDVFIPTQVTAN 384 (437)
T ss_dssp CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC--------C-----------CCCEEEEEEEETT
T ss_pred ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec--------c---------cccCceEEEEEeecc
Confidence 334 88999999999 789999999999999999987642111000 0 001223555666666
Q ss_pred CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCC--CcEEEEeecCCeEEEEE
Q psy17610 453 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKICL 512 (515)
Q Consensus 453 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~v~iw~ 512 (515)
..+++.. |+...+........|. ..|++++|+++ +.+|++|+.||.|+||+
T Consensus 385 ~~~~~~~--------~~~~~~~~~~~~~~h~-~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 385 LTMLLRK--------MKRTSTHSVDDSLYHH-DIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEE--------CC-------------C-CCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEEEEe--------cccccccccCcccccc-cceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6655544 3444445555556666 99999999998 88999999999999995
No 55
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-41 Score=313.62 Aligned_cols=291 Identities=15% Similarity=0.164 Sum_probs=265.1
Q ss_pred EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610 117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ 196 (515)
Q Consensus 117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 196 (515)
...+.+|.++|++++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCce---------eeEEeeccccC--ceEEEE
Q psy17610 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQ---------SLQCVLKEHTS--SVSVIQ 260 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~---------~~~~~~~~~~~--~v~~~~ 260 (515)
+++....+. +...+.+++|+|+++++++++.+ +.|++||+..... .....+..|.. .+.+++
T Consensus 105 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 105 NGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 999988873 88899999999999999999998 9999999964432 12334445555 899999
Q ss_pred EecCCCEEEEEeCCCcEEEEEccc-ceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc
Q psy17610 261 IKSDSKEAMSASTDGTCVLWDLIK-STRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA 338 (515)
Q Consensus 261 ~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 338 (515)
|+|+++++++++.||.|++||+++ .+....+. +...+.+++|+|++++|++++.++.|++||+++++.+..+... .
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~ 260 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--C 260 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--S
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--C
Confidence 999999999999999999999998 67776666 4568999999999999999999999999999999999988843 7
Q ss_pred cEEEEEEcCCCCEEEEEcCCC--------------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610 339 AVNCVDFVDDGKYFLTGGADQ--------------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF 404 (515)
Q Consensus 339 ~i~~~~~~~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 404 (515)
.+.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++|+|++++|++++.||.|+
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 899999999999999999888 899999999999999999999999999999999999999999999
Q ss_pred EEeCCCC
Q psy17610 405 LWTFPEL 411 (515)
Q Consensus 405 iw~~~~~ 411 (515)
+|++...
T Consensus 341 iw~~~~~ 347 (369)
T 3zwl_B 341 LHHFEKS 347 (369)
T ss_dssp EEEECHH
T ss_pred EEECccc
Confidence 9998764
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.5e-42 Score=342.77 Aligned_cols=290 Identities=18% Similarity=0.291 Sum_probs=254.9
Q ss_pred EEEecCCCcEEEEEEecCC-CEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610 75 LYLLKDDSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR 149 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 149 (515)
-.+.+|.+.|++++|+|++ ++|++|+.|++|++|++.++. .....+.+|...|.+++|+|++++|++++.|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4577999999999999864 799999999999999997632 23456778999999999999999999999999999
Q ss_pred EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe--cCCCCCCeEEEEEcCCC--CEEE
Q psy17610 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII--PNAHNRGVTALAITQDG--TRLL 225 (515)
Q Consensus 150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~--~~l~ 225 (515)
|||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||.......... ..+|...|.+++|+|++ ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 9999999999999999999999999999999999999999999998765443322 14688899999999986 6899
Q ss_pred EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC
Q psy17610 226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS 305 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (515)
+++.|+.|++||++ .......+.+|...|.+++|+|+++++++++.||.|++||+++++.+..+..+..+.+++|+|+
T Consensus 536 s~s~d~~v~vwd~~--~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 536 SASWDKTVKVWNLS--NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 613 (694)
T ss_dssp EEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS
T ss_pred EEeCCCeEEEEECC--CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC
Confidence 99999999999995 4556777899999999999999999999999999999999999999888888889999999999
Q ss_pred CcEEEEEECCCeEEEEeCCCCceEEEEecCCC------------------ccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDV------------------AAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
+.+++++. ++.|++||+++++.+..+..+.. ..+++++|+|+|++|++|+.||.|++|++.
T Consensus 614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 98887765 55699999999998877753221 136889999999999999999999999985
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.3e-41 Score=321.26 Aligned_cols=320 Identities=17% Similarity=0.261 Sum_probs=274.2
Q ss_pred EEEEEecCCCcE-EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 73 TALYLLKDDSGI-SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 73 ~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
....+.+|...| +++++ ++++|++|+.||.|++||+.+++ ....+.+|.+.|.+++|+|++ .+++++.|++|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~-~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc-EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 445677898874 66666 46899999999999999999964 555667899999999999997 99999999999999
Q ss_pred eCCCCceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceE----------------------EEecCC
Q psy17610 152 SVRTLNELLRISVMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLK----------------------FIIPNA 207 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~----------------------~~~~~~ 207 (515)
|+++++.+..+.+|...|.+++|++ +++++++++.|+.|++||+.+++.. .....+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 9999999999999999999999995 7789999999999999999877532 122367
Q ss_pred CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
|...+.++ +++++++++++.|+.|++||+. .......+.+|...|.+++|+|+++++++++.||.|++||+++++.
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVA--QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECC--CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 88888877 5678899999999999999995 4566777889999999999999999999999999999999999998
Q ss_pred EEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 288 LIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 288 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
+..+.. ...+.++.++ +.++++++.|+.|++||+.+++........ ..+..++|+|+++++++++ ||.|++||+
T Consensus 345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHT--NLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECT--TCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCC--CCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 888864 4578899987 589999999999999999998877666533 5677889999999999998 899999999
Q ss_pred cCCeeeee-ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610 367 REGVPCFV-GIGHAASITKIKISPDKKVIVSVSADGGIFLW 406 (515)
Q Consensus 367 ~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 406 (515)
++++.+.. ...|...|.+++|+ +..++++++.||.+.+|
T Consensus 420 ~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 420 RSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred CCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 99998875 67889999999997 44556666667766555
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.1e-41 Score=320.74 Aligned_cols=325 Identities=18% Similarity=0.329 Sum_probs=278.6
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
..+....+.+|...+.. ++.+++++|++++.||.|++||+.+++....+ .+|...|.+++|+ ++.+++|+.||.|+
T Consensus 107 ~~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 107 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred CcceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 34456678888876433 35667999999999999999999999998888 6999999999997 56999999999999
Q ss_pred EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEE
Q psy17610 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCS 313 (515)
Q Consensus 235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 313 (515)
+||+. +......+.+|...|.++.++ ++.+++++.||.|++||+.+++....+.. ...+.++.+ ++..+++++
T Consensus 183 vwd~~--~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 183 VWNAE--TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EEETT--TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EEECC--cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 99995 456677888999999999985 57899999999999999999988877764 457888888 788999999
Q ss_pred CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcE
Q psy17610 314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKV 393 (515)
Q Consensus 314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 393 (515)
.|+.|++||+++++.+..+..+. ..+.++.| +++++++++.||.|++||+++++.+..+.+|...+.++.+ ++++
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~ 331 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHT-NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI 331 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCS-SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTE
T ss_pred CCCEEEEEECCCCcEeEEecCCC-CceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCE
Confidence 99999999999999999998776 78999999 7889999999999999999999999999999999999888 4669
Q ss_pred EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610 394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 473 (515)
|++++.||.|++||+...+.... . .....|...|.+++|+ +++|++++.||.|++||+.++
T Consensus 332 l~~~~~dg~i~vwd~~~~~~~~~--------~---------~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 332 LVSGNADSTVKIWDIKTGQCLQT--------L---------QGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEE--------E---------CSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEEEeCCCeEEEEECCCCcEEEE--------E---------ccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 99999999999999976431100 0 0011255679999995 689999999999999999999
Q ss_pred eeeeee-----cccccceEEEEEEcCCCcEEEEeecCCe----EEEEEEe
Q psy17610 474 SIIRSL-----EGSDVAAVNCVDFVDDGKYFLTGGADQI----VKICLYI 514 (515)
Q Consensus 474 ~~~~~~-----~~~~~~~v~~~~~s~~~~~l~s~~~dg~----v~iw~~~ 514 (515)
+.+..+ .++. ..|.+++|+|++.+|++|+.||+ |.+|||-
T Consensus 393 ~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 393 EFIRNLVTLESGGSG-GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp CEEEEEEECTTGGGT-CEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred ceeeeeeccccCCCC-ceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 998888 3444 89999999999999999999998 9999973
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6e-41 Score=320.86 Aligned_cols=321 Identities=18% Similarity=0.326 Sum_probs=268.4
Q ss_pred eeEEEEecCeEE-EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610 158 ELLRISVMNMIC-ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236 (515)
Q Consensus 158 ~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 236 (515)
....+.+|...+ .++.+ ++++|++|+.||.|++||+.+++....+ .+|...|.+++|+|++ .+++|+.||.|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~-~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEE-eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 456778888774 55554 6789999999999999999999999888 6999999999999988 89999999999999
Q ss_pred EccCCceeeEEeeccccCceEEEEEe--cCCCEEEEEeCCCcEEEEEcccceEEE-----------------------EE
Q psy17610 237 KLTRESQSLQCVLKEHTSSVSVIQIK--SDSKEAMSASTDGTCVLWDLIKSTRLI-----------------------IM 291 (515)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------------------~~ 291 (515)
|+. +......+.+|...|.+++|+ +++.++++++.|+.|++||+++..... ..
T Consensus 189 d~~--~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 189 DIK--KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp ETT--TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred ECC--CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 995 455677888999999999998 577899999999999999998765321 12
Q ss_pred E-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610 292 I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 292 ~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
. +...+.++ +++++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|+++++++|+.||.|++||+++++
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 1 22344444 6889999999999999999999999999998776 899999999999999999999999999999999
Q ss_pred eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610 371 PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH 450 (515)
Q Consensus 371 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 450 (515)
++..+.+|...|.+++|+ +++|++++.||.|++||+..... .....+...+..++|+
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~---------------------~~~~~~~~~~~~~~~~ 400 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR---------------------KFSYHHTNLSAITTFY 400 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE---------------------EEEEECTTCCCEEEEE
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce---------------------eeeecCCCCccEEEEE
Confidence 999999999999999997 57999999999999999976431 1111234557788999
Q ss_pred cCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 451 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 451 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
|+++++++++ ||.|++||+.+++++......+...|.+++|+ +..++++++.||.+.+|-
T Consensus 401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 9999999998 89999999999999987433334999999997 445566667777665543
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.6e-42 Score=320.04 Aligned_cols=291 Identities=14% Similarity=0.122 Sum_probs=259.6
Q ss_pred eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc------eeEEEEecCeEEEEEEEeeC----C---CEEE
Q psy17610 116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN------ELLRISVMNMICACIVFTYD----G---KAIL 182 (515)
Q Consensus 116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~ 182 (515)
....+.+|.++|++++|+| ++|++++.|+.|++||+.+++ .+..+..|...|.+++|+|+ + ++|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4556778999999999999 699999999999999999988 78889999999999999999 9 9999
Q ss_pred EEeCCCeEEEEecCCCce-----EEEecCCC-----CCCeEEEEEc----CCCCE-EEEecCCCcEEEEEccC------C
Q psy17610 183 SGWNDGFIRCFTPQSGKL-----KFIIPNAH-----NRGVTALAIT----QDGTR-LLSGGGEGQVRIWKLTR------E 241 (515)
Q Consensus 183 ~~~~dg~i~~~~~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~iw~~~~------~ 241 (515)
+++.|+.|++|++.+++. ...+ ..| ...|.+++|+ |++++ |++++.||.|++||+.. .
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEcCCCCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 999999999999998886 6666 567 5899999999 99999 99999999999999975 2
Q ss_pred ceee---EEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcC
Q psy17610 242 SQSL---QCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHP 304 (515)
Q Consensus 242 ~~~~---~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~ 304 (515)
.... ...+ ..|...|.+++|+|++ .+++++.|+.|++||+++++.+..+.. ...+.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 2111 1134 4588999999999999 999999999999999999999888886 67899999999
Q ss_pred CCcEEEEEECC---CeEEEEeCCCCceEEEEec-------------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 305 SEVQLITCSTN---KMIDYWETCDGSIIRSLEG-------------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 305 ~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
+++++++++.+ +.|++||+++++.+..+.. +. ..+.+++|+|++++|++++.||.|++||+++
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC-CcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999 9999999999999999887 44 8999999999999999999999999999999
Q ss_pred Ceeeeecc------CC---------------CCCeeEEEECCCC----------cEEEEEeCCCcEEEEeCCCC
Q psy17610 369 GVPCFVGI------GH---------------AASITKIKISPDK----------KVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 369 ~~~~~~~~------~~---------------~~~i~~~~~~~~~----------~~l~~~~~dg~i~iw~~~~~ 411 (515)
++.+..+. +| ...|++++|+|++ ++|++++.||.|++|++..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99999988 78 9999999999998 79999999999999998653
No 61
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-41 Score=303.27 Aligned_cols=290 Identities=20% Similarity=0.312 Sum_probs=257.4
Q ss_pred ECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610 109 DMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG 188 (515)
Q Consensus 109 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 188 (515)
|..++.++...+.+|.+.|.+++| |++++|++++.|+.|++||+.+++....+..|...|.+++|+|++++|++++.||
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 445556777888999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-C
Q psy17610 189 FIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-D 264 (515)
Q Consensus 189 ~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 264 (515)
.+++|++... +....+ ..|...|.+++| +++++++++.|+.|++|| .......+..|...+.++.+.| +
T Consensus 82 ~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFS 154 (313)
T ss_dssp CEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETT
T ss_pred eEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc----CCcEEEecccCCCceeEEEEccCC
Confidence 9999998764 445555 689999999999 577999999999999999 2445667788999999999988 8
Q ss_pred CCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610 265 SKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC 342 (515)
Q Consensus 265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 342 (515)
++.+++++.|+.|++||. .+....+. +...+.+++++|++. +++++.++.|++||+++++.+..+..+. ..+.+
T Consensus 155 ~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~ 230 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYC 230 (313)
T ss_dssp TTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCS-SCEEE
T ss_pred CCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCC-ceEEE
Confidence 999999999999999994 34444444 566899999999998 9999999999999999999999998776 89999
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610 343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412 (515)
Q Consensus 343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 412 (515)
++|+|++ .+++++.||.|++||+++++....+..|...|.+++|+|+++ +++++.||.|++|++...+
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred EEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 9999999 588999999999999999999999999999999999999998 6678999999999998654
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-41 Score=313.67 Aligned_cols=310 Identities=15% Similarity=0.155 Sum_probs=249.1
Q ss_pred EecCCCceEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEE
Q psy17610 193 FTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMS 270 (515)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 270 (515)
+++...+....+ .+|...|.+++|+|++ ++|++|+.||.|++||+............+|...|.+++|+| +++++++
T Consensus 58 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 58 RSLKSYKLHRTA-SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHTTCEEEEEE-CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred ccccccceEEec-cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 334455556666 6899999999999998 999999999999999997655555544557999999999999 7899999
Q ss_pred EeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610 271 ASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347 (515)
Q Consensus 271 ~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (515)
++.|+.|++||++........... ..+.+++|+|+++++++++.++.|++||+ +++.+..+..+. ..+.+++|+|
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-~~v~~~~~~~ 214 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-AKVTHAEFNP 214 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-SCEEEEEECS
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-CcEEEEEECC
Confidence 999999999999864443333333 56999999999999999999999999999 677888888776 8999999999
Q ss_pred CCC-EEEEEcCCCeEEEEEccC----CeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610 348 DGK-YFLTGGADQIVKMWMYRE----GVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDSRSL 421 (515)
Q Consensus 348 ~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 421 (515)
+++ ++++++.|+.|++||+++ +..+..+ +|...|++++|+| ++++|++++.|+.|++||+..........
T Consensus 215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--- 290 (383)
T 3ei3_B 215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII--- 290 (383)
T ss_dssp SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE---
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc---
Confidence 999 999999999999999988 5566655 7999999999999 99999999999999999998764321110
Q ss_pred ceeeecccc-cccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc-cceEEEEEEcCCCcEE
Q psy17610 422 SSKISRSTA-RSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYF 499 (515)
Q Consensus 422 ~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l 499 (515)
........ .............+..++|+|++++ +++.||.|++||+.+++++..+.++. ...+..++|+|++++|
T Consensus 291 -~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l 367 (383)
T 3ei3_B 291 -IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL 367 (383)
T ss_dssp -ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEE
T ss_pred -cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEE
Confidence 00000000 0000011112245667888888888 88899999999999999999998753 3667778999999999
Q ss_pred EEeecCCeEEEEEE
Q psy17610 500 LTGGADQIVKICLY 513 (515)
Q Consensus 500 ~s~~~dg~v~iw~~ 513 (515)
++++ ||.|++|++
T Consensus 368 ~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 368 ASGM-GFNILIWNR 380 (383)
T ss_dssp EEEE-TTEEEEEEC
T ss_pred EEec-CCcEEEEec
Confidence 9997 999999996
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.7e-41 Score=318.03 Aligned_cols=292 Identities=13% Similarity=0.116 Sum_probs=255.0
Q ss_pred EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-----eeEEeeccCccCeEEEEeCCC----C---cEEEE
Q psy17610 74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-----TLTLVNTCHTSAIYDLQFPVN----F---SSVFA 141 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~h~~~v~~~~~~~~----~---~~l~~ 141 (515)
...+.+|.+.|++++|+| ++|++|+.||.|++||+.++. .....+.+|..+|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 344568999999999998 899999999999999999865 244555679999999999999 9 99999
Q ss_pred EecCCcEEEEeCCCCce-----eEEEEec-----CeEEEEEEEe----eCCCE-EEEEeCCCeEEEEecCC------Cce
Q psy17610 142 TCSKNDIRIWSVRTLNE-----LLRISVM-----NMICACIVFT----YDGKA-ILSGWNDGFIRCFTPQS------GKL 200 (515)
Q Consensus 142 ~~~d~~i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~~~~~~~------~~~ 200 (515)
++.|+.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 99999999999998887 8888888 5899999999 99999 99999999999999988 554
Q ss_pred EE-----Eec------CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc---c---cCceEEEEEec
Q psy17610 201 KF-----IIP------NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE---H---TSSVSVIQIKS 263 (515)
Q Consensus 201 ~~-----~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---~---~~~v~~~~~~~ 263 (515)
+. .+. ..|...|.+++|+|++ ++++++.|+.|++||++. ......+.. | ...|.+++|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST--LRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT--TEEEEEEECCC---CCCCCEEEEEECS
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC--CceeEEEeccccccccCCccceEEECC
Confidence 43 442 4588899999999999 999999999999999953 456667777 8 99999999999
Q ss_pred CCCEEEEEeCC---CcEEEEEcccceEEEEEE--------------cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610 264 DSKEAMSASTD---GTCVLWDLIKSTRLIIMI--------------LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326 (515)
Q Consensus 264 ~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~ 326 (515)
++++|++++.| +.|++||+++++.+..+. +...+.+++|+|++++|++++.|+.|++||++++
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999 999999999998888876 4568999999999999999999999999999999
Q ss_pred ceEEEEe------cC--------------CCccEEEEEEcCCC----------CEEEEEcCCCeEEEEEccCCe
Q psy17610 327 SIIRSLE------GS--------------DVAAVNCVDFVDDG----------KYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 327 ~~~~~~~------~~--------------~~~~i~~~~~~~~~----------~~l~~~~~dg~i~i~d~~~~~ 370 (515)
+.+..+. .+ +...|.+++|+|++ ++|++++.||.|++|++++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9999998 55 14899999999998 799999999999999998763
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.7e-41 Score=314.83 Aligned_cols=295 Identities=15% Similarity=0.164 Sum_probs=252.3
Q ss_pred EECCCCceeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEee-CCCEEEE
Q psy17610 108 IDMNSGFTLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTY-DGKAILS 183 (515)
Q Consensus 108 w~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~ 183 (515)
|++.+ ..+...+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++
T Consensus 58 ~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 58 RSLKS-YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHTT-CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred ccccc-cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 33344 34555677899999999999998 899999999999999999988877775 5899999999999 7899999
Q ss_pred EeCCCeEEEEecCCCceEEEec--CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEE
Q psy17610 184 GWNDGFIRCFTPQSGKLKFIIP--NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI 261 (515)
Q Consensus 184 ~~~dg~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~ 261 (515)
++.|+.|++||+++.. ...+. ..|...|.+++|+|++++|++++.|+.|++||++ ......+.+|...|.+++|
T Consensus 137 ~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD---GHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp EETTTEEEEEETTSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT---SCEEEEEECSSSCEEEEEE
T ss_pred EeCCCEEEEEECCCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC---CCEEEEeccCCCcEEEEEE
Confidence 9999999999999643 33332 2345889999999999999999999999999984 3456678889999999999
Q ss_pred ecCCC-EEEEEeCCCcEEEEEccc----ceEEEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610 262 KSDSK-EAMSASTDGTCVLWDLIK----STRLIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGS 335 (515)
Q Consensus 262 ~~~~~-~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 335 (515)
+|+++ ++++++.|+.|++||+++ +.....+.+...+.+++|+| ++.++++++.|+.|++||+++++....+..+
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 99999 899999999999999998 67777778888999999999 9999999999999999999998877666543
Q ss_pred C----------------CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC--CCCCeeEEEECCCCcEEEEE
Q psy17610 336 D----------------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG--HAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 336 ~----------------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~ 397 (515)
. ...+..++++|++++ +++.||.|++||+.+++.+..+.+ |...+..++|+|++++|+++
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred cccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence 2 134445677777776 778999999999999999988876 56778888999999999999
Q ss_pred eCCCcEEEEeCCC
Q psy17610 398 SADGGIFLWTFPE 410 (515)
Q Consensus 398 ~~dg~i~iw~~~~ 410 (515)
+ |+.|++||+++
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 7 99999999864
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=313.78 Aligned_cols=295 Identities=13% Similarity=0.191 Sum_probs=251.2
Q ss_pred ceeEEeeccCccCeEEEEeCCCCcEEEEEe-c---CCcEEEEeCCCCceeEEE-EecCeEEEEEEEeeC---CCEEEEEe
Q psy17610 114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATC-S---KNDIRIWSVRTLNELLRI-SVMNMICACIVFTYD---GKAILSGW 185 (515)
Q Consensus 114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~---d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~ 185 (515)
+.+..+..+|...|.+++|+|+++.+++++ . |+.|++||+.+++..... ..|...|.+++|+|+ +++|++++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 455666778999999999999997776555 3 899999999998866543 378889999999998 69999999
Q ss_pred CCCeEEEEecCCCc-eEEEecCCCCCCeEEEEE------cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC----
Q psy17610 186 NDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAI------TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS---- 254 (515)
Q Consensus 186 ~dg~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---- 254 (515)
.||.|++||+.+++ ....+ .+|...|.++.| +|++++|++++.|+.|++||+.... .....+..|..
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD-DPVANMEPVQGENKR 165 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS-SCSEEECCCTTSCCC
T ss_pred CCCeEEEEeCCCCCccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC-CcceeccccCCCCCC
Confidence 99999999999988 66666 689999999955 6789999999999999999997543 23444444443
Q ss_pred ceEEEE----EecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcC---CCcEEEEEECCCeEEEEeCCCCc
Q psy17610 255 SVSVIQ----IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP---SEVQLITCSTNKMIDYWETCDGS 327 (515)
Q Consensus 255 ~v~~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~i~~~d~~~~~ 327 (515)
.+.+++ |+|+++++++++.|+.|++||+++++......+...+.+++|+| ++.++++++.++.|++||+++++
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 788888 67899999999999999999999999888888888999999999 99999999999999999998876
Q ss_pred eEEEEe-----cCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCC-------------------eeeeeccCCCCCe
Q psy17610 328 IIRSLE-----GSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREG-------------------VPCFVGIGHAASI 382 (515)
Q Consensus 328 ~~~~~~-----~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~~~~i 382 (515)
....+. .+. ..+.+++|+|+++ ++++++.||.|++||++.+ +.+..+.+|...|
T Consensus 246 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 246 PTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp TTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred cccceeeeccCCCc-CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 654443 554 8999999999998 8999999999999999754 4567788999999
Q ss_pred eEEEECCCCcEEE-EEeCCCcEEEEeCCCC
Q psy17610 383 TKIKISPDKKVIV-SVSADGGIFLWTFPEL 411 (515)
Q Consensus 383 ~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~ 411 (515)
++++|+|++++|+ +++.|+.|++|++.+.
T Consensus 325 ~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 325 SSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999999999998 8999999999998764
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.7e-41 Score=312.91 Aligned_cols=291 Identities=13% Similarity=0.171 Sum_probs=253.6
Q ss_pred eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC
Q psy17610 120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS 197 (515)
Q Consensus 120 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 197 (515)
+..|.++|.+++|+|+++++++++.|+.|++||+.+++ .+..+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 34589999999999999999999999999999999887 8888999999999999999999999999999999999998
Q ss_pred CceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610 198 GKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274 (515)
Q Consensus 198 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 274 (515)
++..... ...|...|.+++|+|++++|++++.|+.|++||++.... ........|...|.+++|+|+++++++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 8754443 257899999999999999999999999999999975542 1233346789999999999999999999999
Q ss_pred CcEEEEEcc------------------cceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610 275 GTCVLWDLI------------------KSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS 335 (515)
Q Consensus 275 ~~i~iwd~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 335 (515)
+.|++||++ .++....+. +...+.+++|+|+++++++++.|+.|++||+++++.+..+..+
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 999999953 566666664 4567999999999999999999999999999999999999877
Q ss_pred CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC--Cee--------------------------------e------eec
Q psy17610 336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE--GVP--------------------------------C------FVG 375 (515)
Q Consensus 336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~--------------------------------~------~~~ 375 (515)
. ..+.+++|+|++++++++ .|+.|++|++.+ ++. . ..+
T Consensus 244 ~-~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 244 T-LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp S-CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred C-CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 5 799999999999988888 899999999987 421 0 222
Q ss_pred -cCCCCCeeEEEEC-CCC---cEEEEEeCCCcEEEEeCCCCc
Q psy17610 376 -IGHAASITKIKIS-PDK---KVIVSVSADGGIFLWTFPELE 412 (515)
Q Consensus 376 -~~~~~~i~~~~~~-~~~---~~l~~~~~dg~i~iw~~~~~~ 412 (515)
.+|...|++++|. +++ ++|++++.||.|++|++...+
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 4899999999976 566 999999999999999987644
No 67
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.9e-41 Score=334.65 Aligned_cols=290 Identities=18% Similarity=0.277 Sum_probs=250.2
Q ss_pred eEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCC-----ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe
Q psy17610 116 LTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTL-----NELLRISVMNMICACIVFTYDGKAILSGWNDGF 189 (515)
Q Consensus 116 ~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 189 (515)
....+.+|.+.|++++|+|++ ..|++++.|++|++|++.+. .....+.+|...|.+++|+|++++|++++.|+.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 444677899999999999875 68889999999999999764 345678899999999999999999999999999
Q ss_pred EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceee-EEeeccccCceEEEEEecCC--C
Q psy17610 190 IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL-QCVLKEHTSSVSVIQIKSDS--K 266 (515)
Q Consensus 190 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~ 266 (515)
|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||........ .....+|...|.+++|+|++ .
T Consensus 454 v~vwd~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEETTTTEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEEECCCCcceeEE-eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 999999999988887 6899999999999999999999999999999985322111 11225788999999999986 5
Q ss_pred EEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610 267 EAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345 (515)
Q Consensus 267 ~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 345 (515)
.+++++.|++|++||+++.+....+.. ...+.+++|+|+++++++++.|+.|++||+.+++.+..+..+ ..+.+++|
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~ 610 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHALCF 610 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--SCEEEEEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--CcEEEEEE
Confidence 799999999999999999888877764 458999999999999999999999999999999988777654 67999999
Q ss_pred cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-------------------CCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-------------------ASITKIKISPDKKVIVSVSADGGIFLW 406 (515)
Q Consensus 346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------~~i~~~~~~~~~~~l~~~~~dg~i~iw 406 (515)
+|++.++++++ ++.|++||+++++.+..+..+. ..+++++|+|++++|++++.||.|++|
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 99999888776 5669999999988776654321 237899999999999999999999999
Q ss_pred eCC
Q psy17610 407 TFP 409 (515)
Q Consensus 407 ~~~ 409 (515)
++.
T Consensus 690 ~i~ 692 (694)
T 3dm0_A 690 GIG 692 (694)
T ss_dssp EC-
T ss_pred ecc
Confidence 985
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-41 Score=314.58 Aligned_cols=287 Identities=18% Similarity=0.294 Sum_probs=248.5
Q ss_pred EEeeccCccCeEEEEeCCC----CcEEEEEecCCcEEEEeCCCCceeEEEEe-----cCeEEEEEEEeeC----CCEEEE
Q psy17610 117 TLVNTCHTSAIYDLQFPVN----FSSVFATCSKNDIRIWSVRTLNELLRISV-----MNMICACIVFTYD----GKAILS 183 (515)
Q Consensus 117 ~~~~~~h~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~ 183 (515)
..+..+|.++|.+++|+|+ ...+++++.++.|++||+.+++.+..+.. +...|.+++|+|+ +++|++
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 3566689999999999984 56788888888999999999888877765 4467999999999 679999
Q ss_pred EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee---ccccCceEEE
Q psy17610 184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL---KEHTSSVSVI 259 (515)
Q Consensus 184 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~ 259 (515)
++.||.|++||+.+++.+..+ .+|...|.+++|+| ++++|++++.||.|++||++. ......+ .+|...|.++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT--DTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT--TEEEEEECSTTSCSSCEEEE
T ss_pred ecCCCEEEEEEchhceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec--CeEEEEecccccccCceeEE
Confidence 999999999999999998887 58999999999999 999999999999999999954 3445555 6899999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-----------------------------cCccEEEEEEcCCCcEEE
Q psy17610 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-----------------------------LPSMIMSAAYHPSEVQLI 310 (515)
Q Consensus 260 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~l~ 310 (515)
+|+|+++++++++.||.|++||+++++....+. +...+.+++|+ +++++
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 999999999999999999999998765432221 55678999998 77999
Q ss_pred EEECCCeEEEEeCCCCce--------------EEEEecCCCccEEEEEEcCC--CCEEEEEcCCCeEEEEEccCCee---
Q psy17610 311 TCSTNKMIDYWETCDGSI--------------IRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVP--- 371 (515)
Q Consensus 311 ~~~~~~~i~~~d~~~~~~--------------~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--- 371 (515)
+++.++.|++||+.+++. +..+..+. ..+.+++|+|+ +++|++++.||.|++||+.++++
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ-CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS-CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccccC-CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 999999999999988754 66666665 78999999999 99999999999999999998753
Q ss_pred -eeeccCC--CCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610 372 -CFVGIGH--AASITKIKISPDKKVIVSVSADGGIFLWTFP 409 (515)
Q Consensus 372 -~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~ 409 (515)
...+..| ...|++++|+|++++|++++.||.|++||+.
T Consensus 325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 3466777 7999999999999999999999999999975
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.5e-41 Score=314.10 Aligned_cols=317 Identities=14% Similarity=0.139 Sum_probs=254.5
Q ss_pred EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT 239 (515)
Q Consensus 162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 239 (515)
+..|..+|.+++|+|++++|++++.|+.|++||+.+++ ....+ .+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 44588899999999999999999999999999999987 66666 5899999999999999999999999999999997
Q ss_pred CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEEEEcCCCcEEEEEEC
Q psy17610 240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSAAYHPSEVQLITCST 314 (515)
Q Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~~~ 314 (515)
.........+..|...|.+++|+|+++++++++.|+.|++||+..... ...+. +...+.+++|+|+++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 655455555678999999999999999999999999999999987752 23332 3568999999999999999999
Q ss_pred CCeEEEEeC------------------CCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc
Q psy17610 315 NKMIDYWET------------------CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI 376 (515)
Q Consensus 315 ~~~i~~~d~------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 376 (515)
++.+++||+ ..++.+..+..+. ..+.+++|+|++++|++++.||.|++||+++++++..+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCC-CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 999999995 4677777777665 889999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610 377 GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL 456 (515)
Q Consensus 377 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 456 (515)
.|..+|.+++|+|++++|+++ .|+.|++|++............+ +...-
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~------------------------------~~~~~ 290 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL------------------------------DVPKQ 290 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC------------------------------CCC--
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc------------------------------Ccccc
Confidence 999999999999999988877 99999999987611100000000 00000
Q ss_pred EEeecCCeEEEE---ecCCCeee------eeec-ccccceEEEEEEc-CCC---cEEEEeecCCeEEEEEE
Q psy17610 457 ITCSTNKMIDYW---ETCDGSII------RSLE-GSDVAAVNCVDFV-DDG---KYFLTGGADQIVKICLY 513 (515)
Q Consensus 457 ~~~~~dg~v~iw---d~~~~~~~------~~~~-~~~~~~v~~~~~s-~~~---~~l~s~~~dg~v~iw~~ 513 (515)
........+++| +. .++.. ..+. +|. .+|++++|+ ++| ++|++++.||.|++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 291 SSQRGLTARERFQNLDK-KASSEGSAAAGAGLDSLHK-NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp ------CHHHHHHHCCC-CC---------CCCSSSSS-SCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred chhhhcchhhhhhhccc-ccccccCcccccccccccc-CCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 011112335555 42 23332 3343 666 899999966 676 99999999999999985
No 70
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-43 Score=323.70 Aligned_cols=317 Identities=8% Similarity=0.018 Sum_probs=259.3
Q ss_pred ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610 121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200 (515)
Q Consensus 121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 200 (515)
+.-...|.+++|+|||+++++++.|++|+ |...++.+ .+|...|.+++|+|+| .++.+.+|+. +.
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~---~~ 76 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELA---QQ 76 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCC---CS
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC-------CcceEEEEeC---CC
Confidence 34567899999999999999999999999 76665544 6899999999999999 4555555543 32
Q ss_pred EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-----ceEEEEEecCCCEEEEEeCCC
Q psy17610 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-----SVSVIQIKSDSKEAMSASTDG 275 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~ 275 (515)
...+...|...|.+++|+|+|..||+++.||.|++||... ....+. |.. .+.+++|+|||++|++++.||
T Consensus 77 ~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 77 NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 2233236688999999999999999999999999999532 444555 555 599999999999999999999
Q ss_pred cEEEEEcccce-------EEEEEEc-----CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce---EEEEecCCCccE
Q psy17610 276 TCVLWDLIKST-------RLIIMIL-----PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI---IRSLEGSDVAAV 340 (515)
Q Consensus 276 ~i~iwd~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i 340 (515)
+|++||+.++. .+..+.. ...|.+++|+|++ +++++.|+.+++||+..++. ..++...+...|
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 99999998874 2455432 2489999999999 88999999999999988773 356654444889
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE--CCCCcEEEEEeCCCcEEEEeCCCCcCccCCC
Q psy17610 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI--SPDKKVIVSVSADGGIFLWTFPELEDDVGDS 418 (515)
Q Consensus 341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 418 (515)
.+++|+ |+.||+++ ++.|++||+.+++......+|...+..++| +|++..|++++.||+ ++|...
T Consensus 230 ~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------- 296 (588)
T 2j04_A 230 TDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------- 296 (588)
T ss_dssp CCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------
T ss_pred EEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------
Confidence 999999 68899887 699999999988774444489999999999 999999999999999 999864
Q ss_pred cccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcE
Q psy17610 419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY 498 (515)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 498 (515)
.++++|++..+++. |+++++|+...+. +..+++ . ..|.+++|||||+.
T Consensus 297 ---------------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~-~~I~~va~SPdG~~ 344 (588)
T 2j04_A 297 ---------------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-T-LVIHGISLSPDGYS 344 (588)
T ss_dssp ---------------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-E-EEEEEEEECTTSSE
T ss_pred ---------------------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-c-eEEEEEEECCCCCE
Confidence 14589999988875 9999999975444 455555 3 78999999999999
Q ss_pred EEEeec
Q psy17610 499 FLTGGA 504 (515)
Q Consensus 499 l~s~~~ 504 (515)
+|+++.
T Consensus 345 lA~~~~ 350 (588)
T 2j04_A 345 IAIVYD 350 (588)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998874
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-41 Score=309.31 Aligned_cols=293 Identities=14% Similarity=0.175 Sum_probs=244.6
Q ss_pred EEEEecCCCcEEEEEEecCCCEEE-EEec---CceEEEEECCCCceeEEeeccCccCeEEEEeCCC---CcEEEEEecCC
Q psy17610 74 ALYLLKDDSGISSLQYNPVNNKVF-VGTV---NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN---FSSVFATCSKN 146 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~~~l~-~~~~---d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~d~ 146 (515)
.....+|...|.+++|+|+++.++ +|+. |+.|++||+.++........+|..+|.+++|+|+ +.++++++.|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 344567999999999999996554 5655 8999999999876655555579999999999998 68999999999
Q ss_pred cEEEEeCCCCc-eeEEEEecCeEEEEEEE------eeCCCEEEEEeCCCeEEEEecCCCc-eEEEecCCCC----CCeEE
Q psy17610 147 DIRIWSVRTLN-ELLRISVMNMICACIVF------TYDGKAILSGWNDGFIRCFTPQSGK-LKFIIPNAHN----RGVTA 214 (515)
Q Consensus 147 ~i~iw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~----~~v~~ 214 (515)
.|++||+.+++ .+..+..|...|.++.| +|++++|++++.||.|++||+.+++ ....+ ..|. ..+.+
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANM-EPVQGENKRDCWT 169 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEE-CCCTTSCCCCEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceec-cccCCCCCCceEE
Confidence 99999999988 88899999999999955 6889999999999999999999887 55555 3443 37999
Q ss_pred EE----EcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceE
Q psy17610 215 LA----ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 215 ~~----~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
++ |+|+++++++++.|+.|++||++.... .....|...|.+++|+| ++.++++++.||.|++||+++++.
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence 98 788999999999999999999965432 33467889999999999 999999999999999999987654
Q ss_pred EEEE------EcCccEEEEEEcCCCc-EEEEEECCCeEEEEeCCCC-------------------ceEEEEecCCCccEE
Q psy17610 288 LIIM------ILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCDG-------------------SIIRSLEGSDVAAVN 341 (515)
Q Consensus 288 ~~~~------~~~~~~~~~~~~~~~~-~l~~~~~~~~i~~~d~~~~-------------------~~~~~~~~~~~~~i~ 341 (515)
...+ .+...+.+++|+|+++ ++++++.|+.|++||++.+ +.+..+..+. ..|.
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~v~ 325 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST-QPIS 325 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS-SCEE
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC-CCee
Confidence 4333 3566899999999998 8999999999999998754 3556666665 8999
Q ss_pred EEEEcCCCCEEE-EEcCCCeEEEEEccCCee
Q psy17610 342 CVDFVDDGKYFL-TGGADQIVKMWMYREGVP 371 (515)
Q Consensus 342 ~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~ 371 (515)
+++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999999999998 799999999999976543
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=313.93 Aligned_cols=331 Identities=16% Similarity=0.243 Sum_probs=245.5
Q ss_pred EEEEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCceeEEee------------ccCccCeEEEEeCC-CCcEE
Q psy17610 74 ALYLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVN------------TCHTSAIYDLQFPV-NFSSV 139 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------------~~h~~~v~~~~~~~-~~~~l 139 (515)
...+.+|.+.|++++|+| ++++||+|+.||.|++||+.++....... .+|...|.+++|+| ++..+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 345567999999999999 99999999999999999999864433322 35999999999999 77789
Q ss_pred EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC---CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDG---KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA 216 (515)
Q Consensus 140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~ 216 (515)
++++.|+.|++||+.+++....+. +...+.++.|+|.+ .++++++.++.|++||+++++....+ ..|...|.+++
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~ 193 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL-QGHRQEILAVS 193 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE-CCCCSCEEEEE
T ss_pred EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee-cCCCCcEEEEE
Confidence 999999999999999988887776 67788999999854 49999999999999999999988887 68999999999
Q ss_pred EcCCCC-EEEEecCCCcEEEEEccCCceeeEE--------------eeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610 217 ITQDGT-RLLSGGGEGQVRIWKLTRESQSLQC--------------VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281 (515)
Q Consensus 217 ~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 281 (515)
|+|+++ .+++++.||.|++||++........ ....|...|.+++|+|+++++++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999988 5889999999999999754322111 1257889999999999999999999999999999
Q ss_pred cccceEEEEEEcC------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610 282 LIKSTRLIIMILP------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 282 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
+.+++........ ...........+..+++++.++.|++||+.+++.+..+..+. ..|.+++|+|++++|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY-KTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS-SCEEEEEEETTTTEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC-CeEEEEEEcCCCCEEEEE
Confidence 9987654433211 112222233445667777889999999999999999998876 899999999999999999
Q ss_pred cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCC
Q psy17610 356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~ 410 (515)
+.||.|++||+++++++.....+.. ...+.+ ....+.+.+.++.+++|+.+.
T Consensus 353 ~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 353 SRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ETTSCEEEEEECC-------------------------------------------
T ss_pred CCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCCcc
Confidence 9999999999999887765443322 223333 334556677899999998754
No 73
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-39 Score=294.95 Aligned_cols=287 Identities=15% Similarity=0.239 Sum_probs=251.4
Q ss_pred EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610 73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 152 (515)
....+.+|.+.|++++| |++++|++|+.||.|++||+.++ .....+..|...|.+++|+|+++.+++++.|+.+++|+
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 34567789999999999 99999999999999999999885 44555667999999999999999999999999999999
Q ss_pred CCCC---ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEec
Q psy17610 153 VRTL---NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGG 228 (515)
Q Consensus 153 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 228 (515)
+... +.+..+..|...|.++.| +++++++++.|+.|++|| .++....+ ..|...+.++.|.| +++++++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL-QAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE-ECCSSCEEEEEEEETTTTEEEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec-ccCCCceeEEEEccCCCCEEEEEE
Confidence 8754 557778889999999999 578999999999999999 56666666 68999999999998 899999999
Q ss_pred CCCcEEEEEccCCceeeEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCC
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSE 306 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 306 (515)
.|+.|++||. ......+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+. +...+.+++|+|++
T Consensus 163 ~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 163 ADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp TTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 9999999994 233444555 899999999999988 9999999999999999999888887 45689999999999
Q ss_pred cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610 307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV 374 (515)
Q Consensus 307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 374 (515)
.+++++.++.|++||+.+++.+..+..+. ..+.+++|+|+++ +++++.||.|++||+++++....
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVITLPA-ISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEECSS-SCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEeccC-ceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 68899999999999999999999998876 7999999999998 56788999999999988765544
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-42 Score=328.41 Aligned_cols=315 Identities=10% Similarity=0.051 Sum_probs=231.2
Q ss_pred EecCCCEEEEEecCceEEEEECCCCcee---EEeeccCccCeEEEEeCCC------CcEEEEEecCCcEEEEeCCCCce-
Q psy17610 89 YNPVNNKVFVGTVNCEIFLIDMNSGFTL---TLVNTCHTSAIYDLQFPVN------FSSVFATCSKNDIRIWSVRTLNE- 158 (515)
Q Consensus 89 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~h~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~~~~- 158 (515)
.+|+++.+|+++.|++|+|||+.+++.. ...+.+|.+.|.+++|+|+ +..|++++.|++|++||+.+++.
T Consensus 169 ~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp -------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred cchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 4788899999999999999999876432 2335568899999999997 56899999999999999987642
Q ss_pred ----------eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce-EEEecCCCCCCeEEE--EEcCCC-CEE
Q psy17610 159 ----------LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL-KFIIPNAHNRGVTAL--AITQDG-TRL 224 (515)
Q Consensus 159 ----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l 224 (515)
...+.+|...|.+++|++++ .|++|+.||+|++||+++++. ...+ .+|...|.++ +|+|++ .+|
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~~g~~~l 326 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSDFEDTVV 326 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCTTSCCEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEEEEcCCCCCeEE
Confidence 34677889999999999864 899999999999999997743 3334 6899999999 568887 899
Q ss_pred EEecCCCcEEEEEccCCceeeEEeeccccC--ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEE
Q psy17610 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTS--SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAA 301 (515)
Q Consensus 225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~ 301 (515)
++++.|++|++||++.. .....+.+|.. .|.+++|+|+++.+++++.|++|++||++++.....+ .+...|.+++
T Consensus 327 aS~S~D~tvklWD~~~~--~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDI--ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp EEEETTSEEEEECGGGH--HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEeccCCeEEEEECCCC--CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEE
Confidence 99999999999999643 33334455543 5789999999999999999999999999988765444 4667899999
Q ss_pred EcCCCcEEEEEECCCeEEEEeCCCCceEEEEe----cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeecc
Q psy17610 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGI 376 (515)
Q Consensus 302 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~ 376 (515)
|+|+++.|++|+.|++|++||+... .+.... ......+.+++|+|+++.+. ...+ ..+|+.. ++..+..+.
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~ 480 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKID 480 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC------------
T ss_pred eCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeec
Confidence 9999999999999999999998654 222111 11113577899999998553 2222 3344332 466778889
Q ss_pred CCCCCeeEEEECCCCc---EEEEEeCCCcEEEEeCCCC
Q psy17610 377 GHAASITKIKISPDKK---VIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 377 ~~~~~i~~~~~~~~~~---~l~~~~~dg~i~iw~~~~~ 411 (515)
+|...|.+++|+|++. .+|+|+.||.|+||++...
T Consensus 481 gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 481 AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp -CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 9999999999999954 9999999999999998653
No 75
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.2e-40 Score=308.04 Aligned_cols=297 Identities=17% Similarity=0.260 Sum_probs=249.3
Q ss_pred cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEE-eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL-VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
..+.|+||++ ++||+|. |++|+|||..+|+.... .+.+|...|++++|+|+|++|++++.|+.|+|||+++++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 4678999975 5788875 88999999999865543 3456888999999999999999999999999999999999999
Q ss_pred EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC
Q psy17610 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241 (515)
Q Consensus 162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 241 (515)
+.+|...+.++.+ ++..|++++.|+.+++||............+|...+..+.++|+++++++++.|+.+++|+....
T Consensus 185 ~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 185 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 9999999988766 57899999999999999998765544444789999999999999999999999999999998654
Q ss_pred ce--eeEEeeccccCceEEEEEecCCCE-EEE--EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--C
Q psy17610 242 SQ--SLQCVLKEHTSSVSVIQIKSDSKE-AMS--ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--T 314 (515)
Q Consensus 242 ~~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~ 314 (515)
.. ........|...|.+++|+|++.. +++ ++.|++|++||+.+++....+..+..+.++.|+|+++.+++++ .
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecC
Confidence 32 344567789999999999997654 444 3479999999999999999999999999999999999998876 6
Q ss_pred CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE
Q psy17610 315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 384 (515)
|+.|++||+.+++++..+.+|. ..|.+++|+|+|++|++|+.|++|++||+.+..+......+...+..
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~-~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~ 411 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAK 411 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC------------
T ss_pred CCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccc
Confidence 8999999999999999999876 89999999999999999999999999999877666555555444433
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-40 Score=306.61 Aligned_cols=293 Identities=17% Similarity=0.276 Sum_probs=248.1
Q ss_pred EEEecCCCc--EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610 75 LYLLKDDSG--ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 75 ~~~~~~~~~--v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 152 (515)
+...+|... +.+++|+ ++.+++++.|+.|++||+.++.........|...|.+++|+|++++|++++.|+.|++||
T Consensus 85 ~~~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EECTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeCCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 344456655 4455665 456888889999999999998766666666899999999999999999999999999999
Q ss_pred CCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610 153 VRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231 (515)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 231 (515)
+.+++.+..+..|...|.+++| +++.+++++.||.|++||++. +.....+ ..|...|.+++|+|++++|++++.|+
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 9999999999999999999999 567999999999999999995 4455555 68999999999999999999999999
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EEEe--CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MSAS--TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (515)
.|++||++ .......+..|...|.+++|+|++..+ ++++ .|+.|++||+.+++....+.....+.+++|+|+++.
T Consensus 240 ~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 240 VVQIWDAR--SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKE 317 (401)
T ss_dssp CEEEEETT--CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSE
T ss_pred eEEEccCC--CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCe
Confidence 99999995 355666778899999999999977554 4544 699999999999999999999999999999999999
Q ss_pred EEEEE--CCCeEEEEeCCCCceEEE--EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610 309 LITCS--TNKMIDYWETCDGSIIRS--LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG 375 (515)
Q Consensus 309 l~~~~--~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 375 (515)
+++++ .++.|++||+.+++.... +..+. ..+.+++|+|++++|++++.||.|++|++.+++.+...
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99954 899999999998765554 44554 88999999999999999999999999999988776554
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-41 Score=320.09 Aligned_cols=293 Identities=16% Similarity=0.209 Sum_probs=235.6
Q ss_pred EEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCceeE-EeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEe
Q psy17610 76 YLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLT-LVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWS 152 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~ 152 (515)
...+|...|+||+|+| ++++||+|+.||.|+|||+.++.... ..+.+|.++|++|+|+| ++.+|++++.|++|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 3567899999999999 66799999999999999998764433 34568999999999998 678999999999999999
Q ss_pred CCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEecC
Q psy17610 153 VRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGGG 229 (515)
Q Consensus 153 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 229 (515)
++++........ +...+.+++|+|++++|++|+.||.|++||++.. .+..+ .+|...|.+++|+|++. ++++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-RMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-BCCSSCEEEEEECTTCSSEEEEEET
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-ecccceEEeeeecCCCceEEEEecC
Confidence 986543332222 2335788999999999999999999999998754 44444 68999999999999875 7889999
Q ss_pred CCcEEEEEccCCcee-eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-------cEEEEE
Q psy17610 230 EGQVRIWKLTRESQS-LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-------MIMSAA 301 (515)
Q Consensus 230 d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~ 301 (515)
|+.|++||++..... ......+|...|.+++|+|++++|++++.|+.|++||+.++.....+..+. ......
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAA 351 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCE
T ss_pred cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEE
Confidence 999999999654322 223346799999999999999999999999999999999887666553321 234567
Q ss_pred EcCCCcEEEEEEC------------CCeEEEEeCCCCceEEEEecCCCccEEEE-EEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 302 YHPSEVQLITCST------------NKMIDYWETCDGSIIRSLEGSDVAAVNCV-DFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 302 ~~~~~~~l~~~~~------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
++|++..++++.. ++.|++||..+++.+..+..++...|.++ +|+|+|++|++|+ |+.|+||++++
T Consensus 352 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 352 WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 7887777776642 35799999999999999887766788877 6999999999886 78999999988
Q ss_pred Cee
Q psy17610 369 GVP 371 (515)
Q Consensus 369 ~~~ 371 (515)
++.
T Consensus 431 gk~ 433 (435)
T 4e54_B 431 ART 433 (435)
T ss_dssp ---
T ss_pred Cee
Confidence 764
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-40 Score=305.59 Aligned_cols=289 Identities=13% Similarity=0.157 Sum_probs=227.1
Q ss_pred CCCcEEEEEEecCCCEEEEEecC-------ceEEEEECCCCce---------eEEeeccCccCeEEEEeCCCCcEEEEEe
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVN-------CEIFLIDMNSGFT---------LTLVNTCHTSAIYDLQFPVNFSSVFATC 143 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d-------~~i~iw~~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 143 (515)
.+-+|.+++|+||+++|++|+.+ +.|++|+++.+.. ....+.+|...|.+++++++ .+++++
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~--~~~~g~ 90 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG--IILVGC 90 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT--EEEEEC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC--EEEEEE
Confidence 35689999999999999998753 4699999876422 12245678889998887644 666654
Q ss_pred -----------cCCcEEEEeCCCCceeEEE-E--------ecCeEEEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceE
Q psy17610 144 -----------SKNDIRIWSVRTLNELLRI-S--------VMNMICACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLK 201 (515)
Q Consensus 144 -----------~d~~i~iw~~~~~~~~~~~-~--------~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~ 201 (515)
.|+.+++|++.+....... . .+...+.+++|+|||+++++++ .|+.|++||+++++.+
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 3678999998765433222 1 2334588999999999987654 6899999999999998
Q ss_pred EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC----cE
Q psy17610 202 FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG----TC 277 (515)
Q Consensus 202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i 277 (515)
..+ .|...|.+++|+|+|+++++++.+ .+.+|+..............|...|.+++|+|+++.+++++.|+ .+
T Consensus 171 ~~~--~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 171 FEI--ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEE--ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEe--CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 887 477889999999999999999865 56667665455445556677889999999999999999998876 46
Q ss_pred EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
+.|++........ ....+..+. ..|++++|+|+|++||+|+.
T Consensus 248 ~~~~~~~~~~~~~-------------------------------------~~~~~~~~~-~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 248 TKISIKSGNTSVL-------------------------------------RSKQVTNRF-KGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEEEETTEEEEE-------------------------------------EEEEEESSC-SCEEEEEECTTSCEEEEEET
T ss_pred eecccccceecce-------------------------------------eeeeecCCC-CCeEeEEECCCCCceEEEcC
Confidence 6666544322110 112333443 78999999999999999999
Q ss_pred CCeEEEEEccCCeeeee-ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610 358 DQIVKMWMYREGVPCFV-GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 411 (515)
|+.|+|||+++++++.. +.+|...|++++|+||+++|++++.|++|+||+++..
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999887 5789999999999999999999999999999999654
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.5e-40 Score=305.60 Aligned_cols=304 Identities=13% Similarity=0.161 Sum_probs=247.5
Q ss_pred EEEecCCCCCCeEEEEEcCC----CCEEEEecCCCcEEEEEccCCceeeEEeec-----cccCceEEEEEecC----CCE
Q psy17610 201 KFIIPNAHNRGVTALAITQD----GTRLLSGGGEGQVRIWKLTRESQSLQCVLK-----EHTSSVSVIQIKSD----SKE 267 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~ 267 (515)
...+..+|..+|.+++|+|+ ...+++++.++.|++||+.... ....+. .|...|.+++|+|+ +.+
T Consensus 10 ~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp EEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred EEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCE
Confidence 33455789999999999984 4567777777899999996433 222333 25678999999999 668
Q ss_pred EEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEe--cCCCccEEEE
Q psy17610 268 AMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLE--GSDVAAVNCV 343 (515)
Q Consensus 268 l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~ 343 (515)
+++++.||.|++||+.+++.+..+. +...+.+++|+| ++.++++++.|+.|++||+++++.+..+. ..+...+.++
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred EEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 9999999999999999999888887 567899999999 89999999999999999999999988883 2334899999
Q ss_pred EEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC----------------------------CCCCeeEEEECCCCcEEE
Q psy17610 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG----------------------------HAASITKIKISPDKKVIV 395 (515)
Q Consensus 344 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------~~~~i~~~~~~~~~~~l~ 395 (515)
+|+|++++|++++.||.|++||+++++....+.. |...|.+++|+ +++|+
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 9999999999999999999999988765544433 99999999998 77999
Q ss_pred EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC--CcEEEEeecCCeEEEEecCCC
Q psy17610 396 SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 396 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~~ 473 (515)
+++.|+.|++||+............... ..........|...+.+++|+|+ +++|++++.||.|++||+.++
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSES------NVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCC------CEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred EEecCCEEEEEeCCCccccccccccCCc------chheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 9999999999999876542222111110 01122334557778999999999 999999999999999999988
Q ss_pred ee----eeeecccc-cceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610 474 SI----IRSLEGSD-VAAVNCVDFVDDGKYFLTGGADQIVKICLYI 514 (515)
Q Consensus 474 ~~----~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 514 (515)
++ ...+..|. ...|.+++|+|++++|++++.||.|++||+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 64 34677662 3899999999999999999999999999974
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-42 Score=319.85 Aligned_cols=321 Identities=10% Similarity=0.077 Sum_probs=233.6
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN 157 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 157 (515)
.+.++|++++|+|++++||+|+.|+.|++||+.++. .....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 367899999999999999999999999999999863 5556677899999999999999999999999999999999877
Q ss_pred ---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610 158 ---ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231 (515)
Q Consensus 158 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 231 (515)
....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+...|...|.+++|+|++++|++++.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 6677778999999999999999999999999999999998873 5566444999999999999999999999999
Q ss_pred cEEEEEccCC----------------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE----EEEE
Q psy17610 232 QVRIWKLTRE----------------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR----LIIM 291 (515)
Q Consensus 232 ~i~iw~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~ 291 (515)
.|++||+... .......+ +|...|.+++|+|++++|++++.|+.|++||+.+++. +..+
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV 247 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee
Confidence 9999998522 23445555 8999999999999999999999999999999998875 4444
Q ss_pred E-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc--eEEEEecCCC--------------ccEEEEEEcCCCCEEEE
Q psy17610 292 I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDV--------------AAVNCVDFVDDGKYFLT 354 (515)
Q Consensus 292 ~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~ 354 (515)
. +...+.+++|+|+++++++++.++.+ +|+..... ....+..... .....+.|++....+..
T Consensus 248 ~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (377)
T 3dwl_C 248 KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN 326 (377)
T ss_dssp ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------
T ss_pred cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc
Confidence 4 34579999999999999888766666 66654322 1111111100 01223333332222221
Q ss_pred EcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC-c---EEEEEeCCCcEEEEeC
Q psy17610 355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK-K---VIVSVSADGGIFLWTF 408 (515)
Q Consensus 355 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~l~~~~~dg~i~iw~~ 408 (515)
....|... ........|...|+++++.+.. . .|++++.||.|++||+
T Consensus 327 ~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 327 MDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 11111111 1222345799999999976643 3 6999999999999985
No 81
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-42 Score=318.92 Aligned_cols=316 Identities=9% Similarity=0.077 Sum_probs=251.4
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL 159 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 159 (515)
-..+|.+++|||||+++|+++.|++|+ |.+.++. +.+|...|.+++|+|+| .++.+.+|+.+.. .+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~----l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~ 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD----INCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GL 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC----CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccce----ecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eE
Confidence 468899999999999999999999999 7555432 26899999999999998 4666666654322 22
Q ss_pred EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCC-----CeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNR-----GVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
..+ .+...|.+++|+|+|++||+++.||.+++||.++ ....+ . |.. .+.+++|+|+|++|++|+.||+|+
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 222 3477899999999999999999999999999554 55444 4 554 599999999999999999999999
Q ss_pred EEEccCCce-----eeEEee----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEE
Q psy17610 235 IWKLTRESQ-----SLQCVL----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSA 300 (515)
Q Consensus 235 iw~~~~~~~-----~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~ 300 (515)
+||+..+.. .....+ .+|...|.+++|+|+| +++++.|+++++||+..+.. ...+. +...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 999975431 124454 6788899999999999 88999999999999988763 23442 34579999
Q ss_pred EEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE--cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH 378 (515)
Q Consensus 301 ~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 378 (515)
+|+ ++.+++++ ++.|++||+.+++......++ ...+..++| +|++..+++++++|+ ++|..+
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~~~s~d~~~La~a~edG~-klw~~d----------- 296 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGS-LENFHIIPLNHEKESTILLMSNKTSY-KVLLED----------- 296 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSC-CSCCCEEEETTCSSCEEEEECSSCEE-EEEESS-----------
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCC-CceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec-----------
Confidence 999 68888887 699999999887774444354 489999999 999999999999999 999986
Q ss_pred CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEE
Q psy17610 379 AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT 458 (515)
Q Consensus 379 ~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 458 (515)
.++++||+..+++. |+++++|+....... . ......|.+++|||||+.+|+
T Consensus 297 -----~~~~spd~~l~a~~--d~~v~lW~~~g~~l~-----~-----------------~~~~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 297 -----ELHVTADNIIAPYL--EKKFKKWSTIWNEFN-----N-----------------YETTLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp -----SEEEECCCSSHHHH--HHHHHHTTTTTTSSS-----S-----------------SCCEEEEEEEEECTTSSEEEE
T ss_pred -----cEEECCCceEEEEc--CCEEEEEECCCCcee-----e-----------------eccceEEEEEEECCCCCEEEE
Confidence 26699999887764 999999987543210 0 011234899999999999998
Q ss_pred eec
Q psy17610 459 CST 461 (515)
Q Consensus 459 ~~~ 461 (515)
++.
T Consensus 348 ~~~ 350 (588)
T 2j04_A 348 VYD 350 (588)
T ss_dssp EEE
T ss_pred EEe
Confidence 863
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.6e-40 Score=307.39 Aligned_cols=309 Identities=18% Similarity=0.256 Sum_probs=255.6
Q ss_pred CCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee-----------ccccC
Q psy17610 187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL-----------KEHTS 254 (515)
Q Consensus 187 dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----------~~~~~ 254 (515)
++.+++|+++.++....+ .+|...|++++|+| ++++|++++.||.|++||+........... .+|..
T Consensus 22 ~~~~~v~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVE-RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHTEEECTTEEEC-CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred cCcceeeccccCcceeee-eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 345778888877777666 68999999999999 999999999999999999975433222211 25999
Q ss_pred ceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCC---cEEEEEECCCeEEEEeCCCCceEE
Q psy17610 255 SVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIR 330 (515)
Q Consensus 255 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~i~~~d~~~~~~~~ 330 (515)
.|.+++|+| ++.++++++.||.|++||+.+++....+.....+.++.+.|.+ .++++++.++.|++||+++++.+.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee
Confidence 999999999 7789999999999999999999999999999999999999854 499999999999999999999999
Q ss_pred EEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCe-eeeec---------------cCCCCCeeEEEECCCCcE
Q psy17610 331 SLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREGV-PCFVG---------------IGHAASITKIKISPDKKV 393 (515)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~~~~~~~ 393 (515)
.+..+. ..+.+++|+|+++ ++++++.||.|++||++++. .+..+ ..|...|.+++|+|++++
T Consensus 181 ~~~~~~-~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 181 ILQGHR-QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp EECCCC-SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred eecCCC-CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence 888776 8999999999998 58999999999999998764 33333 578899999999999999
Q ss_pred EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610 394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 473 (515)
|++++.||.|++||+...+............ ....+........+..+++++.++.|++||+.++
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNN---------------SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCC---------------CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred EEEecCCCeEEEEECCCCccceecccccccc---------------ccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 9999999999999998765322111110000 0011112222334556777788999999999999
Q ss_pred eeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 474 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 474 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
+++..+.+|. ..|.+++|+|++++|++++.||.|++|++
T Consensus 325 ~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 325 EQITMLKGHY-KTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cceeeeccCC-CeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 9999999987 99999999999999999999999999997
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.9e-41 Score=317.18 Aligned_cols=302 Identities=13% Similarity=0.147 Sum_probs=229.0
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcc
Q psy17610 206 NAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLI 283 (515)
Q Consensus 206 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 283 (515)
.+|...|++++|+| ++++||+|+.||.|+|||+..........+.+|.+.|.+++|+| ++++|++++.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888999999999 56799999999999999997666666667789999999999998 68899999999999999998
Q ss_pred cceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCC
Q psy17610 284 KSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQ 359 (515)
Q Consensus 284 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg 359 (515)
+.......... ..+.+++|+|++.++++++.+|.|++||++. +.+..+..|. ..|.+++|+|+++ ++++++.|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~-~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK-KKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS-SCEEEEEECTTCSSEEEEEETTS
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc-ceEEeeeecCCCceEEEEecCcc
Confidence 76554444332 2478899999999999999999999999864 5556666665 8999999999876 788999999
Q ss_pred eEEEEEccCCeeee---eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccccccee
Q psy17610 360 IVKMWMYREGVPCF---VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLI 436 (515)
Q Consensus 360 ~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (515)
.|++||+++.+... ...+|...|++++|+|++++|++++.||.|++||+................. .. ......
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 350 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF-QH--LTPIKA 350 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC-SS--SCCCBC
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc-cc--ceeEEE
Confidence 99999998765433 3367999999999999999999999999999999987643211110000000 00 000000
Q ss_pred eecCcccEEEeeeccCCcEEEEee-cCCeEEEEecCCCeeeeeecccccceEEEE-EEcCCCcEEEEeecCCeEEEEEE
Q psy17610 437 IMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCV-DFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 437 ~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
.......+..+.+++++..++.++ .++.|++||..+++++..+..++...|.++ +|+|+|++|++|+ |+.|+||++
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 001112233334444444333332 346799999999999998876665888887 6999999999876 889999985
No 84
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-41 Score=315.77 Aligned_cols=338 Identities=10% Similarity=0.056 Sum_probs=234.2
Q ss_pred EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610 161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL 238 (515)
Q Consensus 161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 238 (515)
.+..+..+|.+++|+|++++|++++.|+.|++||+.++ +....+ .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34556778999999999999999999999999999988 555555 689999999999999999999999999999999
Q ss_pred cCCc-eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEEEEcCCCcEEEEE
Q psy17610 239 TRES-QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~ 312 (515)
.... ......+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+. +...+.+++|+|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 6544 345667788999999999999999999999999999999998763 45554 56789999999999999999
Q ss_pred ECCCeEEEEeCCC------------------CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee---
Q psy17610 313 STNKMIDYWETCD------------------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP--- 371 (515)
Q Consensus 313 ~~~~~i~~~d~~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--- 371 (515)
+.|+.|++||+.. ++++..+ .+...+.+++|+|++++|++++.||.|++||+.+++.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9999999999852 4455555 3448899999999999999999999999999999877
Q ss_pred -eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610 372 -CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH 450 (515)
Q Consensus 372 -~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 450 (515)
+..+.+|...|.+++|+|++++|++++.++.+ +|+................ ....... .............+.|+
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~ 318 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGT--SKTSFTH-TGNTGEGREEEGPVSFT 318 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCC--CCCCBSS-SSSBCCCCCC-------
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccc--ccccccc-ccccccccccccccccc
Confidence 78888999999999999999999988766555 7776532211100000000 0000000 00000000113334444
Q ss_pred cCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC-c---EEEEeecCCeEEEEEE
Q psy17610 451 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-K---YFLTGGADQIVKICLY 513 (515)
Q Consensus 451 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~-~---~l~s~~~dg~v~iw~~ 513 (515)
+....+......|... ........|. ..|+++++.+.. . .|+||+.||.|++||+
T Consensus 319 ~~~~~~~~~~~~g~~~-------~~~~~~~~H~-~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 319 ALRSTFRNMDLKGSSQ-------SISSLPTVHQ-NMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------------------CCCSSSCS-SCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccchhhccccc-------cccccCcccc-ceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 4333332222222211 1112223454 899999976543 3 6999999999999984
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.8e-39 Score=299.23 Aligned_cols=283 Identities=17% Similarity=0.297 Sum_probs=246.4
Q ss_pred cCccC--eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC
Q psy17610 122 CHTSA--IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG 198 (515)
Q Consensus 122 ~h~~~--v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 198 (515)
+|... +.++.|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 45544 45577775 4688899999999999999998887776 7889999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV 278 (515)
Q Consensus 199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 278 (515)
+....+ ..|...|.+++|+ ++.+++++.||.|++||++. .......+.+|...|.+++|+|+++++++++.|+.|+
T Consensus 167 ~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 167 TKLRTM-AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRI-ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp CEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTS-SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEEEe-cCCCCceEEEEEC--CCEEEEEcCCCCEEEEeccc-CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 998888 6999999999994 57999999999999999963 3445667888999999999999999999999999999
Q ss_pred EEEcccceEEEEEE-cCccEEEEEEcCCCcE-EEEEE--CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610 279 LWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQ-LITCS--TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT 354 (515)
Q Consensus 279 iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 354 (515)
+||+++++....+. +...+.+++|+|++.. +++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++++++
T Consensus 243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp EEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEE
T ss_pred EccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEE
Confidence 99999988887775 4568999999997754 45544 6999999999999999988754 68999999999999999
Q ss_pred --EcCCCeEEEEEccCCeee--eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610 355 --GGADQIVKMWMYREGVPC--FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412 (515)
Q Consensus 355 --~~~dg~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 412 (515)
|+.||.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.||.|++|++...+
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 558999999999986544 4467899999999999999999999999999999998765
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.9e-39 Score=301.35 Aligned_cols=279 Identities=18% Similarity=0.302 Sum_probs=242.3
Q ss_pred CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE
Q psy17610 126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI 203 (515)
Q Consensus 126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 203 (515)
..+.|+||+++ . ++++.|++|+|||+.+++.+..+. .|...|++++|+|+|++|++|+.||.|++||+++++.+..
T Consensus 107 y~~~l~wS~~n-~-lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSGN-V-LAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTTS-E-EEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCCC-E-EEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 46779999874 4 455569999999999999887766 5677899999999999999999999999999999999988
Q ss_pred ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283 (515)
Q Consensus 204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 283 (515)
+ .+|...+.+++++ +..|++|+.|+.+++||.... ......+.+|...+..+.++|+++++++++.|+.+++|+..
T Consensus 185 ~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~-~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 185 M-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA-EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp E-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS-SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred E-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc-ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 8 7899999998885 679999999999999998643 44566788999999999999999999999999999999998
Q ss_pred cceE-----EEEEEcCccEEEEEEcCCCc-EEEEE--ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610 284 KSTR-----LIIMILPSMIMSAAYHPSEV-QLITC--STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 284 ~~~~-----~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
+++. .....+...+.+++|+|.+. .++++ +.|+.|++||+.++++...+..+ ..+.++.|+|+++.++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISG 338 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEE
Confidence 7642 22334556899999999765 44443 46899999999999999988876 678899999999988876
Q ss_pred c--CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610 356 G--ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412 (515)
Q Consensus 356 ~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 412 (515)
+ .|+.|++||+.+++++..+.+|...|++++|+|++++|++++.|++|++||+....
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 4 78999999999999999999999999999999999999999999999999987654
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=286.66 Aligned_cols=282 Identities=17% Similarity=0.281 Sum_probs=244.9
Q ss_pred EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEe-eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV-NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 162 (515)
.++|+||+++ +||+|. |++|+|||+++++.+... ..+|...|++++|+|+++++++++.|++|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4689999876 777764 899999999997655443 4568889999999999999999999999999999999999999
Q ss_pred EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610 163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242 (515)
Q Consensus 163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 242 (515)
.+|...+.++ ++++..+++++.++.+++|+............+|...+..+.+.++++++++++.|+.|++||+....
T Consensus 106 ~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 106 TSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 9999887654 55678999999999999999988765544447899999999999999999999999999999996543
Q ss_pred --eeeEEeeccccCceEEEEEecCCCEEE---EEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--CC
Q psy17610 243 --QSLQCVLKEHTSSVSVIQIKSDSKEAM---SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--TN 315 (515)
Q Consensus 243 --~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~ 315 (515)
.........+...|..+.++|++..++ +++.+++|++||...............+..+.++|++..+++++ .|
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC
Confidence 223445667888999999999776543 55678999999999999999999999999999999999888765 68
Q ss_pred CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610 316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
+.|++||+++++++..+.+|. ..|++++|+|+|++|++|+.||+|+|||+.+..
T Consensus 264 ~~i~iwd~~~~~~~~~l~gH~-~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999999876 899999999999999999999999999987643
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.9e-39 Score=286.68 Aligned_cols=249 Identities=16% Similarity=0.282 Sum_probs=212.6
Q ss_pred EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS 152 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~ 152 (515)
.+.+|.+.|.+++|+|+|++||+|+.|+.|++||++++ ......+.+|.++|.+++|+|+ ++.|++++.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 45679999999999999999999999999999999753 2455677889999999999864 78999999999999999
Q ss_pred CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcCC------
Q psy17610 153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQD------ 220 (515)
Q Consensus 153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~------ 220 (515)
+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+ .+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCEEEEEECCCC-----
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccCccceEeecCCcccccc
Confidence 99874 56677789999999999998 88999999999999999987632 2333 689999999999996
Q ss_pred -------CCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecCC---CEEEEEeCCCcEEEEEcccce--
Q psy17610 221 -------GTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSDS---KEAMSASTDGTCVLWDLIKST-- 286 (515)
Q Consensus 221 -------~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~-- 286 (515)
+++|++|+.|+.|++||++... ......+.+|...|.+++|+|++ .+|++++.|++|++||+++..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 5799999999999999996543 23556788999999999999984 789999999999999997642
Q ss_pred -EEEEE---EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610 287 -RLIIM---ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 287 -~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~ 325 (515)
....+ .++..+.+++|+|++++|++++.|+.|++|+...
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 11222 2356799999999999999999999999999763
No 89
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.1e-39 Score=293.96 Aligned_cols=287 Identities=13% Similarity=0.132 Sum_probs=224.9
Q ss_pred cCeEEEEEEEeeCCCEEEEEeCCC-------eEEEEecCCCce--------EE-EecCCCCCCeEEEEEcCCCCEEEEe-
Q psy17610 165 MNMICACIVFTYDGKAILSGWNDG-------FIRCFTPQSGKL--------KF-IIPNAHNRGVTALAITQDGTRLLSG- 227 (515)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~~~dg-------~i~~~~~~~~~~--------~~-~~~~~~~~~v~~~~~~~~~~~l~~~- 227 (515)
...||++++|+||+++|++|+.+. .|++|++..+.. .. .....|...+.+++++ ++.+++|
T Consensus 13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 456899999999999999987543 599999875431 11 1125778888888775 4466655
Q ss_pred ----------cCCCcEEEEEccCCceeeE--Ee-----eccccCceEEEEEecCCCEEEEEe--CCCcEEEEEcccceEE
Q psy17610 228 ----------GGEGQVRIWKLTRESQSLQ--CV-----LKEHTSSVSVIQIKSDSKEAMSAS--TDGTCVLWDLIKSTRL 288 (515)
Q Consensus 228 ----------~~d~~i~iw~~~~~~~~~~--~~-----~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~ 288 (515)
+.|+.+++|++........ .. ...+...+..++|+|||+++++++ .|++|++||+++++.+
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 4578899999864432221 11 122345688999999999987654 6899999999999999
Q ss_pred EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE-ecCCCccEEEEEEcCCCCEEEEEcCCC----eEEE
Q psy17610 289 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL-EGSDVAAVNCVDFVDDGKYFLTGGADQ----IVKM 363 (515)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i 363 (515)
..+.+...|.+++|+|+++++++++.+ .+.+|+..+++.+... ...+...+.+++|+|+++++++++.|+ .+++
T Consensus 171 ~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 171 FEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 999988999999999999999998755 5666666676665443 334457899999999999999998877 6888
Q ss_pred EEccCCee----eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeec
Q psy17610 364 WMYREGVP----CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMI 439 (515)
Q Consensus 364 ~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (515)
|++..... ...+.+|...|++++|+||+++||+|+.|+.|+|||+.+.+. ......+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~-------------------~~~~~~g 310 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM-------------------SKIFKQA 310 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-------------------EEEETTS
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-------------------EEEecCc
Confidence 99876543 345678999999999999999999999999999999876431 1122346
Q ss_pred CcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610 440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 473 (515)
|...|++++|+|||++||+++.|++|+|||+...
T Consensus 311 H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 311 HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 8889999999999999999999999999998643
No 90
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=284.86 Aligned_cols=277 Identities=17% Similarity=0.297 Sum_probs=238.0
Q ss_pred eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610 127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII 204 (515)
Q Consensus 127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 204 (515)
.++|+||+++ +++++.|++|+|||+++++.+..+. .|...|.+++|+|++++|++|+.||.|++||+++++.+..+
T Consensus 28 ~~~l~WS~~~--~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS--EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC--EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999985 4555679999999999999888776 56778999999999999999999999999999999998888
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610 205 PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK 284 (515)
Q Consensus 205 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 284 (515)
.+|...+.++.+ ++..+++++.++.+++|+.... ......+.+|...+..+.+.++++++++++.|+.|++||+++
T Consensus 106 -~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 -TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA-EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp -ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS-SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred -cCccceEEEeec--CCCEEEEEecCCceEeeecCCC-ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 689888877665 4679999999999999998643 445667789999999999999999999999999999999987
Q ss_pred ceE-----EEEEEcCccEEEEEEcCCCcEE---EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE-
Q psy17610 285 STR-----LIIMILPSMIMSAAYHPSEVQL---ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG- 355 (515)
Q Consensus 285 ~~~-----~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~- 355 (515)
++. .........+..+.+.|++..+ ++++.++.|++||............. ..+..+.|+|+++.++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGH 259 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce--eeeeeeeecccccceEEEE
Confidence 642 2233345678999999976543 34567899999999998887776654 678899999999888765
Q ss_pred -cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610 356 -GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 356 -~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 411 (515)
+.|+.|++||+++++++..+.+|.+.|++++|+|++++|++++.||+|++||+.+.
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999998654
No 91
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2.7e-37 Score=322.87 Aligned_cols=375 Identities=11% Similarity=0.014 Sum_probs=281.8
Q ss_pred ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610 121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199 (515)
Q Consensus 121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 199 (515)
.+|...+.++.|+++ ..++++..++.+.||.+.. +.....+..+. .+...+|+|+|+.|+.+ .++.|.+|++...+
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK 276 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence 678889999999988 5556666689999998753 44455555444 34567999999988887 48999999995554
Q ss_pred eEEEecCC-----------CCCCeEEEEEc-CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-ceEEEEEecCCC
Q psy17610 200 LKFIIPNA-----------HNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-SVSVIQIKSDSK 266 (515)
Q Consensus 200 ~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 266 (515)
.. .+ .. |...+..++|+ |+|+.|++++ ++.+.+|+..... ...+..|.. .+..++|+ +++
T Consensus 277 l~-~l-~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 277 IE-KI-EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---VLKVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp EE-EC-CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---EEECSCCSCEEEEEECSS-SEE
T ss_pred ee-ee-ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---eEEccCCCcceEEeeeEc-CCC
Confidence 44 44 22 34468999999 9999999887 7899999985432 223556666 89999999 999
Q ss_pred EEEEEeCCCcEE-EEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610 267 EAMSASTDGTCV-LWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345 (515)
Q Consensus 267 ~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 345 (515)
.+++++.++.+. +||+..++......+...+..++|+|+++++++++.++.+++||+.+++.......+. ..+..++|
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-~~v~~~~~ 428 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-AMITDFTI 428 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SCCCCEEE
T ss_pred eEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-CCccceEE
Confidence 999999888888 8999877655444444678999999999999999999999999999998877776554 77889999
Q ss_pred cCCCCEEEEEcCCC----------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCcc
Q psy17610 346 VDDGKYFLTGGADQ----------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDV 415 (515)
Q Consensus 346 ~~~~~~l~~~~~dg----------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 415 (515)
+|||++|++++.++ .|++||+.+++ ...+..|...+..++|+|||++|++++.++...+|+........
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~ 507 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF 507 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccc
Confidence 99999998887644 89999999887 66777888889999999999999999998888888865332111
Q ss_pred CCCccccee-----------------------eecccccccceeeecCcccEEEeeeccCCcEEEE-------------e
Q psy17610 416 GDSRSLSSK-----------------------ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT-------------C 459 (515)
Q Consensus 416 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~ 459 (515)
......... ............+..+...+..++++||++++++ .
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~ 587 (1045)
T 1k32_A 508 EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGA 587 (1045)
T ss_dssp CSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCC
T ss_pred ccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccccccc
Confidence 000000000 0000000111222335577899999999988875 1
Q ss_pred ecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 460 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 460 ~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
.....|++||+.+++... +. ..+.+++|||||++|++++.| .|++||.
T Consensus 588 ~~~~~l~~~d~~~~~~~~-l~----~~v~~~~~S~DG~~l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 588 PEKGVLLKYDVKTRKVTE-VK----NNLTDLRLSADRKTVMVRKDD-GKIYTFP 635 (1045)
T ss_dssp CCCEEEEEEETTTCCEEE-EE----EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred CCCceEEEEECCCCcEEE-ee----cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence 235578999998887533 22 468899999999999998877 7999996
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=309.35 Aligned_cols=342 Identities=13% Similarity=0.127 Sum_probs=259.8
Q ss_pred CccCC-CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEec
Q psy17610 1 MKTTP-NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLK 79 (515)
Q Consensus 1 ~~~~~-~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (515)
|+|+| ++++|++|+.+|.|.+||+.+.. . ...+ ......+
T Consensus 69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~--------------------------------~---~~~~----~~~~~~~ 109 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQGVIKIWNLKEII--------------------------------V---GEVY----SSSLTYD 109 (437)
T ss_dssp EEEECSSSCEEEEEETTSEEEEEEHHHHH--------------------------------T---TCCC----SCSEEEE
T ss_pred EEECCCCCCEEEEecCCceEEEeECcccc--------------------------------c---Cccc----ceeeecc
Confidence 46788 88888888888899998865410 0 0000 0111225
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECC---CCceeEEe---------ecc--CccCeEEEE--eCCCCcEEEEEe
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN---SGFTLTLV---------NTC--HTSAIYDLQ--FPVNFSSVFATC 143 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~---~~~~~~~~---------~~~--h~~~v~~~~--~~~~~~~l~~~~ 143 (515)
|.+.|++++|+|++++|++|+.||.|++||++ ++...... +.. +...+.++. ++|++..+++++
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 99999999999999999999999999999995 33222211 111 455666766 567899999999
Q ss_pred cCCcEEEEeCCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--
Q psy17610 144 SKNDIRIWSVRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-- 219 (515)
Q Consensus 144 ~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 219 (515)
.|+.|++||+++++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++.+..+...|..+|.+++|+|
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 999999999999999999998 8899999999999999999999999999999999998887557888999996664
Q ss_pred --CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE
Q psy17610 220 --DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI 297 (515)
Q Consensus 220 --~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 297 (515)
++.+|++++.||.|++||++ .......+.+|...+..+.|+|+++.+ .+.. .....+...+
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~-----------~~~~~~~~~v 332 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFV--KGHCQYAFINSDEQPSMEHFLPIEKGL----EELN-----------FCGIRSLNAL 332 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETT--TTEEEEEEESSSSCCCGGGGSCBCSSG----GGCC-----------CCCCCSGGGG
T ss_pred CCCccEEEEEcCCCcEEEEEcC--CCcEEEEEEcCCCCCccceeccccccc----ccce-----------ecccccCCce
Confidence 67799999999999999994 456677788898888888888887655 1111 0001244578
Q ss_pred EEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC--CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610 298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD--VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG 375 (515)
Q Consensus 298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 375 (515)
.+++|+ +++++++++.|+.|++||+.+++....+..+. ...+....++++..+++.. ++..........
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 403 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDS 403 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC----------
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCcc
Confidence 899999 77899999999999999999999988887652 2455666677766555544 233334444556
Q ss_pred cCCCCCeeEEEECCC--CcEEEEEeCCCcEEEEe
Q psy17610 376 IGHAASITKIKISPD--KKVIVSVSADGGIFLWT 407 (515)
Q Consensus 376 ~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iw~ 407 (515)
..|...|++++|+++ +.+|++++.||.|++|+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 679999999999998 88999999999999995
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=304.29 Aligned_cols=285 Identities=11% Similarity=0.162 Sum_probs=232.5
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce----------eEEeeccCc------------cCeEEEEeCCCC
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT----------LTLVNTCHT------------SAIYDLQFPVNF 136 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----------~~~~~~~h~------------~~v~~~~~~~~~ 136 (515)
.|.+.|++++|+|+|++||+|+.||.|++||+.++.. +...+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4679999999999999999999999999999987542 455677898 889999999998
Q ss_pred --cEEEEEecCCcEEEEeCCCCcee---------------------------------------EE-EEecCeEEEEEEE
Q psy17610 137 --SSVFATCSKNDIRIWSVRTLNEL---------------------------------------LR-ISVMNMICACIVF 174 (515)
Q Consensus 137 --~~l~~~~~d~~i~iw~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 174 (515)
..+++++.|+.|++||+.+++.. .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 78999999999999999764432 12 2468889999999
Q ss_pred eeCCCEEEEEeCCCeEEEEecCC-CceEEEe------cCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCcee--
Q psy17610 175 TYDGKAILSGWNDGFIRCFTPQS-GKLKFII------PNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQS-- 244 (515)
Q Consensus 175 ~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~-- 244 (515)
+|++++|+++ .|+.|++||+++ ++....+ ...|...|.+++|+|++ ++|++|+.||.|++||++.....
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999994 4444322 35799999999999998 99999999999999999644321
Q ss_pred eEEeeccccC------------ceEEEEEecCCCEEEEEeCCCcEEEEEccc-ceEEEEEEcCcc---------------
Q psy17610 245 LQCVLKEHTS------------SVSVIQIKSDSKEAMSASTDGTCVLWDLIK-STRLIIMILPSM--------------- 296 (515)
Q Consensus 245 ~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~--------------- 296 (515)
....+..|.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+..+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 1455666665 8999999999999999999 9999999987 777766665543
Q ss_pred -EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec-------------------------------CCCccEEEEE
Q psy17610 297 -IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-------------------------------SDVAAVNCVD 344 (515)
Q Consensus 297 -~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-------------------------------~~~~~i~~~~ 344 (515)
+..++|+|++++|++++.|+.|++||+.+++.+..... .....+..++
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA 423 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence 23499999999999999999999999999887632211 1124678899
Q ss_pred EcCCCCEEEEEcCCCeEEEEEc
Q psy17610 345 FVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 345 ~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
|+|++++||+++.++ +++|..
T Consensus 424 ~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 424 WHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp ECSSSSEEEEECSSC-EEEEEC
T ss_pred ECCCCCEEEEEecce-eeeecc
Confidence 999999999998775 777764
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.6e-38 Score=288.46 Aligned_cols=283 Identities=14% Similarity=0.125 Sum_probs=245.2
Q ss_pred EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEE
Q psy17610 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCF 193 (515)
Q Consensus 118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~ 193 (515)
.+..+|.+.|.+++|+|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ +|++++.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456799999999999999999999999999999999877 3556668999999999999999 99999999999999
Q ss_pred ec-CCCceEEEecCC--CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc-------eeeEEeeccccCceEEEEEec
Q psy17610 194 TP-QSGKLKFIIPNA--HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-------QSLQCVLKEHTSSVSVIQIKS 263 (515)
Q Consensus 194 ~~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-------~~~~~~~~~~~~~v~~~~~~~ 263 (515)
|+ .+++. ..+ .. |...|.+++|+| ++.+++++.|+.|++||++... ......+. |...|.+++|+|
T Consensus 85 d~~~~~~~-~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 85 DLIGSPSF-QAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp CSSSSSSE-EEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EeccCCce-Eec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 99 88766 334 57 999999999999 9999999999999999985300 33333444 888999999998
Q ss_pred CCCEEEEEeCCCcEEEEEccc-ceE---EEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCC------ceEEEE
Q psy17610 264 DSKEAMSASTDGTCVLWDLIK-STR---LIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDG------SIIRSL 332 (515)
Q Consensus 264 ~~~~l~~~~~d~~i~iwd~~~-~~~---~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~------~~~~~~ 332 (515)
++ +++++.|+.|++||+++ +.. .....+...+.+++|+| +++++++++.++.+++|++... +....+
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 87 99999999999999987 442 22334556899999999 9999999999999999999887 777788
Q ss_pred ecCC--------CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEeCCCc-
Q psy17610 333 EGSD--------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVSADGG- 402 (515)
Q Consensus 333 ~~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~- 402 (515)
..+. ...+.+++|+|++++|++++.||.|++||+.+++.+..+.+| ...|++++ |++++|++++.||.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~ 316 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTF 316 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHH
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcc
Confidence 7764 238999999999999999999999999999999999999998 99999999 99999999999998
Q ss_pred EEEEeC
Q psy17610 403 IFLWTF 408 (515)
Q Consensus 403 i~iw~~ 408 (515)
.+.|..
T Consensus 317 ~~~~~~ 322 (342)
T 1yfq_A 317 KTNAAI 322 (342)
T ss_dssp HHCSSS
T ss_pred cccccc
Confidence 555543
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=303.56 Aligned_cols=282 Identities=14% Similarity=0.178 Sum_probs=235.8
Q ss_pred CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc-----------eeEEEEecC------------eEEEEEEEeeCC-
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN-----------ELLRISVMN------------MICACIVFTYDG- 178 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~- 178 (515)
|.+.|.+++|+|++++|++++.|+.|+|||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 78899999999999999999999999999999877 477888898 789999999998
Q ss_pred -CEEEEEeCCCeEEEEecCCCceE---------------------------------------EEecCCCCCCeEEEEEc
Q psy17610 179 -KAILSGWNDGFIRCFTPQSGKLK---------------------------------------FIIPNAHNRGVTALAIT 218 (515)
Q Consensus 179 -~~l~~~~~dg~i~~~~~~~~~~~---------------------------------------~~~~~~~~~~v~~~~~~ 218 (515)
..|++++.|+.|++||+.+++.. ..+..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998775432 13336899999999999
Q ss_pred CCCCEEEEecCCCcEEEEEccCCceeeEE-------eeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceE---
Q psy17610 219 QDGTRLLSGGGEGQVRIWKLTRESQSLQC-------VLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTR--- 287 (515)
Q Consensus 219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~--- 287 (515)
|++++|++| .|+.|++||++.. ..... .+.+|...|.+++|+|++ +++++++.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEIT-DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEE-EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCCEEEEe-CCCeEEEEECCCC-CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 999999998 7999999999632 22222 366899999999999998 9999999999999999998875
Q ss_pred -EEEEEcCc-------------cEEEEEEcCCCcEEEEEECCCeEEEEeCCC-CceEEEEecCCCc--------------
Q psy17610 288 -LIIMILPS-------------MIMSAAYHPSEVQLITCSTNKMIDYWETCD-GSIIRSLEGSDVA-------------- 338 (515)
Q Consensus 288 -~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~-------------- 338 (515)
...+..+. .+.+++|+|+++++++++. +.|++||++. ++++..+..+...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 55555543 7999999999999999999 9999999997 8888888776310
Q ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec--------------------------------cCCCCCeeEEE
Q psy17610 339 AVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG--------------------------------IGHAASITKIK 386 (515)
Q Consensus 339 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------------------------------~~~~~~i~~~~ 386 (515)
.+..++|+|++++|++|+.||.|++||+.+++.+... ..+...|..++
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA 423 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence 1234899999999999999999999999987664311 13345789999
Q ss_pred ECCCCcEEEEEeCCCcEEEEeC
Q psy17610 387 ISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 387 ~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
|+|++++||+++.++ +++|.-
T Consensus 424 ~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 424 WHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp ECSSSSEEEEECSSC-EEEEEC
T ss_pred ECCCCCEEEEEecce-eeeecc
Confidence 999999999998775 777763
No 96
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.7e-39 Score=289.34 Aligned_cols=250 Identities=15% Similarity=0.215 Sum_probs=208.7
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEEE
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRIW 151 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw 151 (515)
..+.+|.+.|++++|+|+|++||+|+.|++|++||+.++.. ....+.+|.++|.+++|+| +++.|++++.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 34568999999999999999999999999999999987643 4556788999999999986 47899999999999999
Q ss_pred eCCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceE--EEecCCCCCCeEEEEEcCC-----
Q psy17610 152 SVRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLK--FIIPNAHNRGVTALAITQD----- 220 (515)
Q Consensus 152 ~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~----- 220 (515)
|+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||+..+... .....+|...+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 999874 56677789999999999998 789999999999999999876432 2334689999999999997
Q ss_pred ------------CCEEEEecCCCcEEEEEccCC-ceeeEEeeccccCceEEEEEecCC----CEEEEEeCCCcEEEEEcc
Q psy17610 221 ------------GTRLLSGGGEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKSDS----KEAMSASTDGTCVLWDLI 283 (515)
Q Consensus 221 ------------~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~ 283 (515)
+++|++|+.|+.|++||++.. .......+.+|...|.+++|+|++ .+|++++.|++|++|++.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 468999999999999999633 234566788999999999999986 789999999999999987
Q ss_pred cc---e--EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610 284 KS---T--RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324 (515)
Q Consensus 284 ~~---~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~ 324 (515)
+. + ......+...+.+++|+|++++|++++.|+.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 62 1 11223456789999999999999999999999999975
No 97
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.3e-38 Score=291.40 Aligned_cols=298 Identities=12% Similarity=0.112 Sum_probs=230.7
Q ss_pred EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEE
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRI 150 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~i 150 (515)
.+.+|.+.|++++|+|++++||+|+.||.|++||+.++. .....+.+|..+|.+++|+| ++.+|++++.|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 456899999999999999999999999999999998753 34556678999999999999 6899999999999999
Q ss_pred EeCCCC---------ceeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceEEEe------------cCC
Q psy17610 151 WSVRTL---------NELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLKFII------------PNA 207 (515)
Q Consensus 151 w~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~------------~~~ 207 (515)
||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+.+++....+ ...
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999887 457778889999999999999 999999999999999999887643221 126
Q ss_pred CCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC----CEEEEEeCCCcEEEE
Q psy17610 208 HNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS----KEAMSASTDGTCVLW 280 (515)
Q Consensus 208 ~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iw 280 (515)
|...+.+++|+|+ +..+++++.++.+.+|+...........+.+|...|.+++|+|++ ++|++++.||.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 7889999999997 899999999999988887666666677888999999999999998 899999999999999
Q ss_pred EcccceEEEEEEcC-ccEEEEEEcCCCcEEEE----EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610 281 DLIKSTRLIIMILP-SMIMSAAYHPSEVQLIT----CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 281 d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~----~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
|++.+......... .........+....... +.....+.+|+....+.+..+..+. ..|++++|+|++++|+++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN-GEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEECC---------------------------------------CCSEEEEEEEEECTTS-SCEEEEEECSSSCCEEEE
T ss_pred eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc-ccEEEEEEcCCCCEEEEe
Confidence 99876544332221 12222223333333322 2334456666666677778887766 889999999999999999
Q ss_pred cCCCeEEEEEccCCeeeee
Q psy17610 356 GADQIVKMWMYREGVPCFV 374 (515)
Q Consensus 356 ~~dg~i~i~d~~~~~~~~~ 374 (515)
+.||.|++|++.+++....
T Consensus 325 ~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 325 GDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp ETTSCEEEEEECTTSCEEE
T ss_pred cCCCcEEEEecCcCcchhh
Confidence 9999999999988755443
No 98
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.7e-38 Score=280.28 Aligned_cols=249 Identities=20% Similarity=0.256 Sum_probs=211.3
Q ss_pred EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEE
Q psy17610 160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRI 235 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i 235 (515)
..+.+|...|.+++|+|+|++|++++.|+.|++||+.++ +....+ .+|..+|.+++|++ ++++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 345679999999999999999999999999999999753 556666 69999999999986 3899999999999999
Q ss_pred EEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccce---EEEEEEcCccEEEEEEcCC-----
Q psy17610 236 WKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKST---RLIIMILPSMIMSAAYHPS----- 305 (515)
Q Consensus 236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~----- 305 (515)
||+..........+.+|...|.+++|+|+ +.+|++++.|++|++||+++.. ......+...+.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 99975544555667889999999999997 8899999999999999998653 2223345568999999997
Q ss_pred --------CcEEEEEECCCeEEEEeCCCCc----eEEEEecCCCccEEEEEEcCCC---CEEEEEcCCCeEEEEEccCCe
Q psy17610 306 --------EVQLITCSTNKMIDYWETCDGS----IIRSLEGSDVAAVNCVDFVDDG---KYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 306 --------~~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~ 370 (515)
+++|++++.|+.|++||+++++ ....+..|. ..|.+++|+|++ ++|++++.|+.|++||+++..
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~-~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC-CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998766 455666665 899999999984 899999999999999997642
Q ss_pred ---eeeec--cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 371 ---PCFVG--IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 371 ---~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
....+ ..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 12223 57889999999999999999999999999999753
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-38 Score=289.58 Aligned_cols=279 Identities=11% Similarity=0.105 Sum_probs=242.4
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCc-EEEEEecCCcEEEEeC-C
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFS-SVFATCSKNDIRIWSV-R 154 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~-~ 154 (515)
+|.+.|++++|+|++++|++++.|+.|++|++.++. .......+|...|.+++|+|+++ ++++++.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 699999999999999999999999999999998765 12233447999999999999999 9999999999999999 7
Q ss_pred CCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC---------CceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610 155 TLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQS---------GKLKFIIPNAHNRGVTALAITQDGTR 223 (515)
Q Consensus 155 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~ 223 (515)
+++. ..+.. |...|.+++|+| ++.+++++.|+.|++||+++ ++....+ .|...|.+++|+|++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCEEEEEECSSE--
T ss_pred CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCCceEEEEecCCc--
Confidence 7654 66777 999999999999 99999999999999999987 6655555 388999999999887
Q ss_pred EEEecCCCcEEEEEccC-CceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccc------eEEEEEEcC-
Q psy17610 224 LLSGGGEGQVRIWKLTR-ESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKS------TRLIIMILP- 294 (515)
Q Consensus 224 l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~- 294 (515)
+++++.|+.|++||++. ...........|...+.+++|+| +++++++++.||.+++|++... +....+..+
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccc
Confidence 99999999999999976 44444555667888999999999 9999999999999999999876 555555443
Q ss_pred ---------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe-EEEE
Q psy17610 295 ---------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI-VKMW 364 (515)
Q Consensus 295 ---------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~ 364 (515)
..+.+++|+|++++|++++.+|.|++||+.+++.+..+..++...|.+++ |++++|++++.||. .+.+
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~ 320 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCS
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccc
Confidence 28999999999999999999999999999999999998887458999999 99999999999997 4444
Q ss_pred E
Q psy17610 365 M 365 (515)
Q Consensus 365 d 365 (515)
.
T Consensus 321 ~ 321 (342)
T 1yfq_A 321 A 321 (342)
T ss_dssp S
T ss_pred c
Confidence 3
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.4e-37 Score=289.43 Aligned_cols=276 Identities=23% Similarity=0.425 Sum_probs=243.7
Q ss_pred ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610 121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200 (515)
Q Consensus 121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 200 (515)
.+|...|.++.| +++++++++.|+.|++||+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 357778999888 6789999999999999999999999999999999999998 788999999999999999999999
Q ss_pred EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL 279 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 279 (515)
...+ ..|...|.+++|++ ..+++|+.||.|++||+..... .....+.+|...|.++++ +++++++++.||.|++
T Consensus 206 ~~~~-~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 206 LNTL-IHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEE-CCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEE-cCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 8888 68999999999974 5899999999999999975433 233567889999999998 7789999999999999
Q ss_pred EEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610 280 WDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358 (515)
Q Consensus 280 wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 358 (515)
||+++++.+..+..+ ..+.++.+ ++.++++++.|+.|++||+++++.+..+..+. ..+.+++| ++++|++|+.|
T Consensus 281 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEC--CSSEEEEEETT
T ss_pred EECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-CcEEEEEe--cCCEEEEEeCC
Confidence 999999988888744 57888888 47899999999999999999999999998876 88999999 68899999999
Q ss_pred CeEEEEEccCCe---------eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610 359 QIVKMWMYREGV---------PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412 (515)
Q Consensus 359 g~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 412 (515)
|.|++||+.++. .+..+.+|...|.+++| ++++|++++.||.|++||+....
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 999999998765 78888999999999999 77889999999999999997654
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-37 Score=284.54 Aligned_cols=309 Identities=16% Similarity=0.216 Sum_probs=245.5
Q ss_pred EecCCCceEEEecCCCCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE
Q psy17610 193 FTPQSGKLKFIIPNAHNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM 269 (515)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 269 (515)
++....+....+ .+|...|++++|+|+ |++|++|+.||.|++||+..........+.+|...|.+++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVT-SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECS-SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEec-cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 344555555555 799999999999998 6999999999999999997545555577889999999999999999999
Q ss_pred EEeCCCcEEEEEcccceEEEEEEcCccEEEEEE--cCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610 270 SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY--HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347 (515)
Q Consensus 270 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (515)
+++.||.|++||+.+++......+...+.+++| +|++.++++++.|+.|++||+++++.+..+..+ ..+.++.+.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~ 180 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--ERCYCADVIY 180 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--SCEEEEEEET
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--CCceEEEecC
Confidence 999999999999999999988888899999999 899999999999999999999999999998876 4566666654
Q ss_pred CCCEEEEEcCCCeEEEEEccCCeeeeec--cCCCCCeeEEEECCCCcE----EEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610 348 DGKYFLTGGADQIVKMWMYREGVPCFVG--IGHAASITKIKISPDKKV----IVSVSADGGIFLWTFPELEDDVGDSRSL 421 (515)
Q Consensus 348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 421 (515)
..+++++.++.+.+|+++........ ..+...+..+++.++... +++++.||.|++|++....... .
T Consensus 181 --~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~-----~ 253 (368)
T 3mmy_A 181 --PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK-----D 253 (368)
T ss_dssp --TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHH-----H
T ss_pred --CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccc-----c
Confidence 47888888999999999876433222 234455566666554443 9999999999999997653100 0
Q ss_pred ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEE
Q psy17610 422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT 501 (515)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 501 (515)
..................+...|.+++|+|++++|++++.||.|++||+.+++++..+.+|. .+|.+++|+|+|++|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISACCFNHNGNIFAY 332 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SCEEEEEECTTSSCEEE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC-CCceEEEECCCCCeEEE
Confidence 00000000001111112233469999999999999999999999999999999999999887 89999999999999999
Q ss_pred eecCCeEEEEE
Q psy17610 502 GGADQIVKICL 512 (515)
Q Consensus 502 ~~~dg~v~iw~ 512 (515)
++.|+..+.|+
T Consensus 333 ~s~d~~~~~~~ 343 (368)
T 3mmy_A 333 ASSYDWSKGHE 343 (368)
T ss_dssp EECCCSTTCGG
T ss_pred Eeccccccccc
Confidence 99988655443
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=286.38 Aligned_cols=285 Identities=13% Similarity=0.243 Sum_probs=241.2
Q ss_pred EEecCCCcEEEEEEecC---CCEEEEEecCceEEEEECCC-CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610 76 YLLKDDSGISSLQYNPV---NNKVFVGTVNCEIFLIDMNS-GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW 151 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (515)
.+.+|.+.|++++|+|+ |++|++|+.||.|++||+++ +..+...+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 34579999999999998 69999999999999999997 556657788899999999999999999999999999999
Q ss_pred eCCCCceeEEEEecCeEEEEEEE--eeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610 152 SVRTLNELLRISVMNMICACIVF--TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 229 (515)
|+++++.+. +..|...|.+++| +|++++|++++.||.|++||+++++....+. .+ ..+.++.+.+ ..+++++.
T Consensus 114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~-~~~~~~~~~~--~~~~~~~~ 188 (368)
T 3mmy_A 114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-LP-ERCYCADVIY--PMAVVATA 188 (368)
T ss_dssp ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-CS-SCEEEEEEET--TEEEEEEG
T ss_pred EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-cC-CCceEEEecC--CeeEEEeC
Confidence 999887665 6679999999999 8899999999999999999999998887773 33 4666777664 47888899
Q ss_pred CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCE----EEEEeCCCcEEEEEcccc---eEEEEEEcCc-------
Q psy17610 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE----AMSASTDGTCVLWDLIKS---TRLIIMILPS------- 295 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~d~~i~iwd~~~~---~~~~~~~~~~------- 295 (515)
++.+.+|+++............+...+.++.+.++... +++++.||.|++||++.. .....+..+.
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 99999999976555544444455566777777776655 999999999999999876 3344444433
Q ss_pred ------cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 296 ------MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 296 ------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
.+.+++|+|++++|++++.||.|++||+.+++.+..+..+. ..+.+++|+|+|++|++++.|+..+.|++
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC-CCceEEEECCCCCeEEEEecccccccccc
Confidence 59999999999999999999999999999999999988766 89999999999999999999875554443
No 103
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=5.1e-36 Score=313.20 Aligned_cols=400 Identities=10% Similarity=0.031 Sum_probs=301.6
Q ss_pred EEEEecCCCcEEEEEEecCCCEEEEEecC------ceEEEEECCCCceeEEeeccCccCe-------EEEEeCCCCcEEE
Q psy17610 74 ALYLLKDDSGISSLQYNPVNNKVFVGTVN------CEIFLIDMNSGFTLTLVNTCHTSAI-------YDLQFPVNFSSVF 140 (515)
Q Consensus 74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l~ 140 (515)
...+.+|...+.+++|||||++||+++.+ ..|++|++.++. ...+..|...+ ..++|+|||+.++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE--IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE--EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC--eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 34566799999999999999999988653 479999999864 34456688888 9999999998555
Q ss_pred EEecC------CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC------------CCeEEEEecCCCceEE
Q psy17610 141 ATCSK------NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN------------DGFIRCFTPQSGKLKF 202 (515)
Q Consensus 141 ~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------dg~i~~~~~~~~~~~~ 202 (515)
+++.+ ..|.+|++.+++. ..+..+. ...++|+| | ++++++. +....+|....+....
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~-~~l~~~~--~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~ 197 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINF-VPLNLGP--ATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFK 197 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEE-EECCSCS--CSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEE
T ss_pred EECCcCCCcccceEEEEECCCCCe-EEecCCC--cceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeE
Confidence 55533 3577888876654 3333222 24567999 8 8887753 2345566433333444
Q ss_pred EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610 203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282 (515)
Q Consensus 203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 282 (515)
.+ ..|...+.++.|+++ ..+++++.++.+.+|.++..... ...+..|. .+...+|+|+|+.++++. ++.|.+||+
T Consensus 198 ~l-~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~-~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~ 272 (1045)
T 1k32_A 198 KI-VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKD-LRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNP 272 (1045)
T ss_dssp EE-ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCS-CEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECT
T ss_pred EC-cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCc-ceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecC
Confidence 45 689999999999988 66677888899999987533322 23344444 456779999999988874 889999998
Q ss_pred ccceEEEEEEcC------------ccEEEEEEc-CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610 283 IKSTRLIIMILP------------SMIMSAAYH-PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 283 ~~~~~~~~~~~~------------~~~~~~~~~-~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 349 (515)
...+. ..+..+ ..+..++|+ |+++.+++++ ++.+.+|+...++... +..+....+..++|+ ||
T Consensus 273 ~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg 348 (1045)
T 1k32_A 273 DTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TK 348 (1045)
T ss_dssp TTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SE
T ss_pred CceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CC
Confidence 54433 333321 258899999 9999998887 7899999998876543 444442288999999 99
Q ss_pred CEEEEEcCCCeEE-EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610 350 KYFLTGGADQIVK-MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS 428 (515)
Q Consensus 350 ~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 428 (515)
+.|+.++.++.+. +|++.+++.... .+|...+..++|+||+++|++++.++.+++||+.+.+.
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~--------------- 412 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP--------------- 412 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------------
T ss_pred CeEEEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce---------------
Confidence 9999998888888 999987765443 47888999999999999999999999999999976431
Q ss_pred cccccceeeecCcccEEEeeeccCCcEEEEeecCC----------eEEEEecCCCeeeeeecccccceEEEEEEcCCCcE
Q psy17610 429 TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK----------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY 498 (515)
Q Consensus 429 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 498 (515)
......+...+..++|||||++|++++.++ .|++||+.+++ +..+..+. ..+..++|+|||++
T Consensus 413 -----~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~-~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 413 -----TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTEN-SHDYAPAFDADSKN 485 (1045)
T ss_dssp -----EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSS-SBEEEEEECTTSCE
T ss_pred -----EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCC-cccCCceEcCCCCE
Confidence 111223556688999999999999887654 89999999887 56666665 77889999999999
Q ss_pred EEEeecCCeEEEEE
Q psy17610 499 FLTGGADQIVKICL 512 (515)
Q Consensus 499 l~s~~~dg~v~iw~ 512 (515)
|++++.++..++|+
T Consensus 486 l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 486 LYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEEESCCCCCEEC
T ss_pred EEEEecccCCcCcc
Confidence 99999888877775
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-37 Score=285.82 Aligned_cols=255 Identities=15% Similarity=0.273 Sum_probs=219.9
Q ss_pred EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS 152 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~ 152 (515)
.+.+|.+.|++++|+|++++||+|+.||.|++||+..+ ......+.+|..+|.+++|+|+ +.+|++++.|+.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 45689999999999999999999999999999999742 3445567789999999999987 89999999999999999
Q ss_pred CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcC-------
Q psy17610 153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQ------- 219 (515)
Q Consensus 153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~------- 219 (515)
+.+++ .+..+..|...|.+++|+|+ +++|++++.|+.|++||+.++.. ...+ ..|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC-----
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCCCceEEEEEcCccccccc
Confidence 99987 67777789999999999999 99999999999999999988732 3333 58999999999999
Q ss_pred ------CCCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccce--
Q psy17610 220 ------DGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKST-- 286 (515)
Q Consensus 220 ------~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~-- 286 (515)
++.++++++.|+.|++||++... ......+.+|...|.+++|+|+ ++++++++.||.|++||++++.
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 69999999999999999996543 3455678889999999999999 8999999999999999998863
Q ss_pred -EEEEEE---cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610 287 -RLIIMI---LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS 331 (515)
Q Consensus 287 -~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~ 331 (515)
...... +...+.+++|+|+++++++++.||.|++|++........
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 222221 456799999999999999999999999999986544433
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.9e-37 Score=290.66 Aligned_cols=292 Identities=17% Similarity=0.281 Sum_probs=237.8
Q ss_pred ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610 78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN 157 (515)
Q Consensus 78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 157 (515)
.+|...|.|+++ ++++|++|+.||.|++||..+++ ....+.+|.+.|.+++| +++.+++++.||.|++||+.+++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE-CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC-EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe-EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 356778999887 79999999999999999999864 45567789999999999 67799999999999999999999
Q ss_pred eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610 158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI 235 (515)
Q Consensus 158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 235 (515)
.+..+..|...|.+++|+ +..+++++.||.|++||+.+++... ....+|...|.+++| +++++++|+.||.|++
T Consensus 205 ~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 999999999999999996 4589999999999999999876542 333789999999999 6789999999999999
Q ss_pred EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEEC
Q psy17610 236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCST 314 (515)
Q Consensus 236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 314 (515)
||++ .......+.+|...|.++.+ +++++++++.||.|++||+++++.+..+.. ...+.++++ ++.++++++.
T Consensus 281 wd~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~ 354 (435)
T 1p22_A 281 WNTS--TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY 354 (435)
T ss_dssp EETT--TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEET
T ss_pred EECC--cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeC
Confidence 9995 45667778899999999988 468999999999999999999998888764 457888888 7889999999
Q ss_pred CCeEEEEeCCCCc---------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEE
Q psy17610 315 NKMIDYWETCDGS---------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKI 385 (515)
Q Consensus 315 ~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 385 (515)
||.|++||+.+++ .+..+..+. ..|.+++| ++++|++++.||.|++||+.+....... ....+..++
T Consensus 355 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~~~~~ 430 (435)
T 1p22_A 355 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHS-GRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE-PPRSPSRTY 430 (435)
T ss_dssp TSCEEEEEHHHHTSTTSCTTTTEEEEECCCS-SCCCCEEE--CSSCEEECCSSSEEEEEC--------------------
T ss_pred CCcEEEEECCCCCCccccccchheeeccCCC-CCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC-CCCCCccce
Confidence 9999999987766 777787766 88999999 6788999999999999999876554433 223344555
Q ss_pred EEC
Q psy17610 386 KIS 388 (515)
Q Consensus 386 ~~~ 388 (515)
.|.
T Consensus 431 ~~~ 433 (435)
T 1p22_A 431 TYI 433 (435)
T ss_dssp ---
T ss_pred eee
Confidence 543
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.4e-35 Score=281.22 Aligned_cols=369 Identities=9% Similarity=0.065 Sum_probs=283.3
Q ss_pred cCCCcEEEEEEecCCCEEEEEecC-ceEEEEECCCCceeEEeeccCccCeEEEE---eCCCCcEEEEEec----------
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVN-CEIFLIDMNSGFTLTLVNTCHTSAIYDLQ---FPVNFSSVFATCS---------- 144 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~h~~~v~~~~---~~~~~~~l~~~~~---------- 144 (515)
.....|..+.++|....++..... ....++. ......+..++ |+|++..++..+.
T Consensus 25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 93 (433)
T 3bws_A 25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLE-----------MDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRI 93 (433)
T ss_dssp --CEEEEEEEEECCTTCEEEETTEECCEEEEE-----------EETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEE
T ss_pred cCCcEEEEEecccccCceEEcCceecceeeee-----------cccCCccEEEEEeeccCCCcEEEEEEccccCcceeee
Confidence 455678888899865444433211 1112221 11233456666 7776655554332
Q ss_pred ----CCcEEEEe--CCCC--ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCe
Q psy17610 145 ----KNDIRIWS--VRTL--NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGV 212 (515)
Q Consensus 145 ----d~~i~iw~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v 212 (515)
++.+.+|. ..++ +.+..+..+. .+.+++|+|++.++++++.++.|++||+.+++...... .+|...|
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v 172 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFV 172 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCce
Confidence 33234454 4334 4455555443 45689999977777788888999999999998876432 3688899
Q ss_pred EEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEE
Q psy17610 213 TALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIM 291 (515)
Q Consensus 213 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~ 291 (515)
.+++|+++++++++++.|+.|++||++ .......+..|...+.+++|+|+++.+++++ .|+.|++||+++++....+
T Consensus 173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQANAVHVFDLK--TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETT--TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred eEEEEcCCCEEEEEECCCCEEEEEECC--CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 999999999999999999999999995 4455566778889999999999999886555 7899999999999988888
Q ss_pred EcCccEEEEEEcCCCcEEEEEE--------CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE-EEEcCCCeEE
Q psy17610 292 ILPSMIMSAAYHPSEVQLITCS--------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF-LTGGADQIVK 362 (515)
Q Consensus 292 ~~~~~~~~~~~~~~~~~l~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~ 362 (515)
.....+..++++|+++.+++++ .++.|++||+.+++.+..+... ..+.+++|+|+++.+ ++++.++.|+
T Consensus 251 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 251 DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCCCEEEEEecCCCEEE
Confidence 8888899999999999999888 5889999999999887776433 578899999999754 6668999999
Q ss_pred EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc
Q psy17610 363 MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS 442 (515)
Q Consensus 363 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (515)
+||+.+++....+. +...+.+++|+|++++|++++.+..-
T Consensus 329 v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~--------------------------------------- 368 (433)
T 3bws_A 329 VYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNH--------------------------------------- 368 (433)
T ss_dssp EEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCC---------------------------------------
T ss_pred EEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCc---------------------------------------
Confidence 99999988877764 67789999999999988888764310
Q ss_pred cEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec-CCeEEEEEE
Q psy17610 443 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKICLY 513 (515)
Q Consensus 443 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~iw~~ 513 (515)
....++++++.||.|++||+.+++.+..+..+ ..+.+++|+|+|++|++++. |+.|++|++
T Consensus 369 --------~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 369 --------PTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--NQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp --------TTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred --------cccccccccccceEEEEEECCCCcEEEEecCC--CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 02235667888999999999999999888874 67999999999999998875 999999996
No 107
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.8e-38 Score=282.38 Aligned_cols=250 Identities=18% Similarity=0.231 Sum_probs=204.2
Q ss_pred eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEE
Q psy17610 116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTY--DGKAILSGWNDGFIR 191 (515)
Q Consensus 116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 191 (515)
+..++.+|.++|.+++|+|+|++|++++.|++|+|||+.+++ .+..+.+|..+|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 344667899999999999999999999999999999998765 4677889999999999986 488999999999999
Q ss_pred EEecCCCc--eEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecC--
Q psy17610 192 CFTPQSGK--LKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSD-- 264 (515)
Q Consensus 192 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-- 264 (515)
+||+++++ ....+ .+|...|.+++|+|+ +.+|++|+.|+.|++||++... ......+.+|...+.+++|+|+
T Consensus 85 iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 85 IWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 99999874 44455 689999999999997 7899999999999999996542 2234556789999999999997
Q ss_pred ---------------CCEEEEEeCCCcEEEEEcccc---eEEEEEE-cCccEEEEEEcCCC----cEEEEEECCCeEEEE
Q psy17610 265 ---------------SKEAMSASTDGTCVLWDLIKS---TRLIIMI-LPSMIMSAAYHPSE----VQLITCSTNKMIDYW 321 (515)
Q Consensus 265 ---------------~~~l~~~~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~----~~l~~~~~~~~i~~~ 321 (515)
+++|++++.|++|++||++.. +....+. +...+.+++|+|++ .+|++++.|+.|++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 468999999999999999754 3344443 44579999999986 889999999999999
Q ss_pred eCCCCc----eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 322 ETCDGS----IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 322 d~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
++.+.. ....+..+ ...+.+++|+|++++|++++.|+.|++|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKF-NDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ECSSTTCCCCBCCEEEEC-SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EccCccccchhhhhhhcC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 987631 12233334 3789999999999999999999999999975
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-37 Score=287.14 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=217.2
Q ss_pred CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC--CCceEEEecCCCCCCeEEEEEcCC--CCEEEEecCCC
Q psy17610 156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ--SGKLKFIIPNAHNRGVTALAITQD--GTRLLSGGGEG 231 (515)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 231 (515)
|+++..+.+|...|.+++|+|++++|++++.||.|++||+. +++....+ .+|...|.+++|+++ +++|++++.||
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 34567788999999999999999999999999999999998 45556666 689999999999987 89999999999
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccce---EEEEEEcCccEEEEEEcC--
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKST---RLIIMILPSMIMSAAYHP-- 304 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~-- 304 (515)
.|++||+..........+..|...|.+++|+|+ +.++++++.|+.|++||+++.. ......+...+.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 999999976655577788889999999999999 9999999999999999998773 233334566899999999
Q ss_pred -----------CCcEEEEEECCCeEEEEeCCCCce----EEEEecCCCccEEEEEEcCC---CCEEEEEcCCCeEEEEEc
Q psy17610 305 -----------SEVQLITCSTNKMIDYWETCDGSI----IRSLEGSDVAAVNCVDFVDD---GKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 305 -----------~~~~l~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~ 366 (515)
++..+++++.|+.|++||++++.. ...+..+. ..+.+++|+|+ +++|++++.||.|++||+
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc-CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 699999999999999999987653 34455554 89999999999 899999999999999999
Q ss_pred cCCe-----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 367 REGV-----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 367 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
+++. .......|...|++++|+|++++|++++.||.|++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 8863 2333345889999999999999999999999999999874
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-36 Score=280.24 Aligned_cols=294 Identities=13% Similarity=0.107 Sum_probs=223.4
Q ss_pred EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC----ceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeE
Q psy17610 117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL----NELLRISVMNMICACIVFTY--DGKAILSGWNDGFI 190 (515)
Q Consensus 117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i 190 (515)
..++.+|.+.|++++|+|++++|++++.|+.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4466789999999999999999999999999999999976 35667788999999999999 69999999999999
Q ss_pred EEEecCCC---------ceEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCceeeEE-----------e
Q psy17610 191 RCFTPQSG---------KLKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRESQSLQC-----------V 248 (515)
Q Consensus 191 ~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~-----------~ 248 (515)
++||++++ +....+ ..|...|.+++|+|+ +++|++++.||.|++||++........ .
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 99999887 445555 689999999999999 999999999999999998654321110 1
Q ss_pred eccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEE--EEEE-cCccEEEEEEcCCC----cEEEEEECCCeE
Q psy17610 249 LKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRL--IIMI-LPSMIMSAAYHPSE----VQLITCSTNKMI 318 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~----~~l~~~~~~~~i 318 (515)
...|...+.+++|+|+ +..+++++.++.+.+|+...++.. ..+. +...+.+++|+|++ +++++++.|+.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 1257889999999997 899999999999988888777653 3332 45689999999998 899999999999
Q ss_pred EEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE----cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610 319 DYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG----GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI 394 (515)
Q Consensus 319 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 394 (515)
++||++.+.......... ........++....++.+ .....+.+|+....+.+..+.+|...|++++|+|++++|
T Consensus 243 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESL-TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEECC----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEeCCCCcCccccCCcc-cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999998776554433322 233333444444433333 334556677777778888899999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCc
Q psy17610 395 VSVSADGGIFLWTFPELE 412 (515)
Q Consensus 395 ~~~~~dg~i~iw~~~~~~ 412 (515)
++++.||.|++|++....
T Consensus 322 ~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEETTSCEEEEEECTTS
T ss_pred EEecCCCcEEEEecCcCc
Confidence 999999999999997653
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.6e-34 Score=269.91 Aligned_cols=308 Identities=13% Similarity=0.127 Sum_probs=249.4
Q ss_pred CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEE-EecCCcEEEEeCCCCceeEEEEecCeEEEEE
Q psy17610 94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFA-TCSKNDIRIWSVRTLNELLRISVMNMICACI 172 (515)
Q Consensus 94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~ 172 (515)
.++++++.|+.|++||+++++.+. .+..| ..+.+++|+|+++++++ ++.|+.|++||+.+++.+..+..+. .+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA-TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE-EEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE-EeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 457788899999999999965444 44545 45899999999998854 4579999999999999888887665 88999
Q ss_pred EEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeec
Q psy17610 173 VFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLK 250 (515)
Q Consensus 173 ~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~ 250 (515)
+|+|++++|++++ .++.|++||+.+++....+. +...+.+++|+|+++.+ ++++.++.|++||+.. ......+.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~--~~~~~~~~ 155 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT--KAVINTVS 155 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC--CcEEEEEe
Confidence 9999999886554 67999999999999887763 44578999999999977 6888899999999954 34445555
Q ss_pred cccCceEEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE---CCCeEEEEeCCCC
Q psy17610 251 EHTSSVSVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS---TNKMIDYWETCDG 326 (515)
Q Consensus 251 ~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~i~~~d~~~~ 326 (515)
.+ ..+..++|+|+++.+ ++++.++.|++||+++++....+.....+.+++|+|+++++++++ .++.|++||+.++
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 44 456899999999987 567788999999999999998888888999999999999999888 6899999999999
Q ss_pred ceEEEEecCCCccEEEEEEcCCCCEE-EEEcCCCeEEEEEccCCeeeeeccCCCCCee---EEEECCCC-----------
Q psy17610 327 SIIRSLEGSDVAAVNCVDFVDDGKYF-LTGGADQIVKMWMYREGVPCFVGIGHAASIT---KIKISPDK----------- 391 (515)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~---~~~~~~~~----------- 391 (515)
+.+..+..+ ..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..|..+.. .+.+.|++
T Consensus 235 ~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~ 312 (391)
T 1l0q_A 235 KITARIPVG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSN 312 (391)
T ss_dssp EEEEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEES
T ss_pred eEEEEEecC--CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccc
Confidence 998888876 457899999999877 5668899999999999988887766654421 12222211
Q ss_pred -----------cEEEEEeCCCcEEEEeCCCC
Q psy17610 392 -----------KVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 392 -----------~~l~~~~~dg~i~iw~~~~~ 411 (515)
..+...+.|...++|++..+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 313 ITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp CCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred cccccccccceEEEEeCCCCceEEEEECCCC
Confidence 34555567888999998654
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.1e-35 Score=276.27 Aligned_cols=323 Identities=10% Similarity=0.042 Sum_probs=258.6
Q ss_pred CCCcEEEEE---EecCCCEEEEEe--------------cCc--eEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEE
Q psy17610 80 DDSGISSLQ---YNPVNNKVFVGT--------------VNC--EIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSV 139 (515)
Q Consensus 80 ~~~~v~~~~---~s~~~~~l~~~~--------------~d~--~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l 139 (515)
....+..++ |+|+++.+++.+ .++ .|..+|.+++. .....+. ....+.+++|+|++..+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFK-TGFQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEE-CSSCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEc-CCCCceEEEEeCCCeEE
Confidence 455667777 777776665432 233 44555554331 2333333 33456699999976666
Q ss_pred EEEecCCcEEEEeCCCCceeEE-----EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610 140 FATCSKNDIRIWSVRTLNELLR-----ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA 214 (515)
Q Consensus 140 ~~~~~d~~i~iw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~ 214 (515)
++++.++.|++||+.+++.... +..|...+.+++|+|+++.+++++.|+.|++||+++++....+ ..|...+.+
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~ 216 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKI 216 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeE
Confidence 6666688999999999988763 3367779999999999999999999999999999999988887 478899999
Q ss_pred EEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe--------CCCcEEEEEcccc
Q psy17610 215 LAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS--------TDGTCVLWDLIKS 285 (515)
Q Consensus 215 ~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~iwd~~~~ 285 (515)
++|+|+++.++ +++.|+.|++||++. ......+.. ...+.+++|+|+++.+++++ .|+.|++||+.++
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~--~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKT--KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTT--TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCC--CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 99999999885 555899999999954 344444544 34589999999999999888 5889999999999
Q ss_pred eEEEEEEcCccEEEEEEcCCCcEE-EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC-------
Q psy17610 286 TRLIIMILPSMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA------- 357 (515)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------- 357 (515)
+..........+..++|+|+++.+ ++++.++.+++||+.+++.+..+... ..+.+++|+|+|+++++++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 294 KLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred cEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 888888777789999999999765 55578999999999999988887643 67899999999999888876
Q ss_pred --------CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCC
Q psy17610 358 --------DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPE 410 (515)
Q Consensus 358 --------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~ 410 (515)
||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. |+.|++|++..
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999999988888765 457899999999999998875 99999999753
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-36 Score=284.28 Aligned_cols=285 Identities=12% Similarity=0.179 Sum_probs=237.3
Q ss_pred CcEEEEEEecCCCEEE-EEecCceEEEEECCCCce---eEEeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEeCCCC
Q psy17610 82 SGISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFT---LTLVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWSVRTL 156 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~---~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~ 156 (515)
.....++++|+...++ +++.||.|++|++..... ....+.+|.++|.+++|+| ++..|++++.|+.|++||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3445688998775444 478899999999966322 2334678999999999999 8999999999999999999988
Q ss_pred -------ceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEe
Q psy17610 157 -------NELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSG 227 (515)
Q Consensus 157 -------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~ 227 (515)
+.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+. ..|...|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 6788899999999999999998 699999999999999999999888874 5799999999999999999999
Q ss_pred cCCCcEEEEEccCCceeeEEee-ccccCc-eEEEEEecCCCEEEEE---eCCCcEEEEEcccceE---EEEEEcCccEEE
Q psy17610 228 GGEGQVRIWKLTRESQSLQCVL-KEHTSS-VSVIQIKSDSKEAMSA---STDGTCVLWDLIKSTR---LIIMILPSMIMS 299 (515)
Q Consensus 228 ~~d~~i~iw~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~---~~~~~~~~~~~~ 299 (515)
+.|+.|++||++. ......+ ..|... +..+.|+|++.+++++ +.|+.|++||+++.+. .........+..
T Consensus 195 ~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 195 CRDKRVRVIEPRK--GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp ETTSEEEEEETTT--TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred ecCCcEEEEeCCC--CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 9999999999964 4445555 677765 8999999999999998 7899999999988654 333345667999
Q ss_pred EEEcCCCcEEEEEE-CCCeEEEEeCCCCce-EEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610 300 AAYHPSEVQLITCS-TNKMIDYWETCDGSI-IRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 300 ~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
++|+|+++++++++ .|+.|++||+.+++. +..+..+ +...+.+++|+|++.++++ .++.+++|++.++.
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 99999999997554 699999999999884 4444322 3478999999999998764 45699999998754
No 113
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.9e-36 Score=280.40 Aligned_cols=250 Identities=15% Similarity=0.244 Sum_probs=213.4
Q ss_pred EecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCc------eeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcE
Q psy17610 77 LLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGF------TLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDI 148 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i 148 (515)
+.+|.+.|++++|+| ++++|++|+.||.|++||+.++. .....+.+|...|.+++|+|++ ..|++++.|+.|
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 156 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVI 156 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCE
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEE
Confidence 346999999999999 99999999999999999999863 3345667899999999999998 689999999999
Q ss_pred EEEeCCCCceeEEE--EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC-eEEEEEcCCCCEEE
Q psy17610 149 RIWSVRTLNELLRI--SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG-VTALAITQDGTRLL 225 (515)
Q Consensus 149 ~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~ 225 (515)
++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+...|... +.++.|+|++++|+
T Consensus 157 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (402)
T 2aq5_A 157 LVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILT 236 (402)
T ss_dssp EEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEE
T ss_pred EEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEE
Confidence 99999999999888 7899999999999999999999999999999999999888874577665 89999999999999
Q ss_pred Ee---cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccce----EEEEEEcCccE
Q psy17610 226 SG---GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKST----RLIIMILPSMI 297 (515)
Q Consensus 226 ~~---~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~----~~~~~~~~~~~ 297 (515)
+| +.|+.|++||++............|...+..++|+|++++++++ +.|+.|++||+.+++ .+..+.+...+
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v 316 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQ 316 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCC
T ss_pred EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcc
Confidence 99 79999999999754433333334577889999999999998754 579999999999876 23333445789
Q ss_pred EEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610 298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSI 328 (515)
Q Consensus 298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~ 328 (515)
.+++|+|++.++++ .++.+++|++.+++.
T Consensus 317 ~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 317 RGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred cceEEeccccccee--cceeEEEEEcCCCcE
Confidence 99999999988764 567999999877543
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.5e-33 Score=263.40 Aligned_cols=347 Identities=15% Similarity=0.150 Sum_probs=260.0
Q ss_pred EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE-EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610 138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI-LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA 216 (515)
Q Consensus 138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~ 216 (515)
.+++++.|+.|++||+++++.+..+..+.. +.+++|+|+++++ ++++.++.|++||+.+++....+. . ...+.+++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-~-~~~v~~~~ 80 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-A-GSSPQGVA 80 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-C-SSSEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-C-CCCccceE
Confidence 456666799999999999999888886654 7999999999987 566689999999999999988874 3 33899999
Q ss_pred EcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcC
Q psy17610 217 ITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILP 294 (515)
Q Consensus 217 ~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~ 294 (515)
|+|++++|+ +++.++.|++||+... .....+.. ...+.+++|+|+++.+ ++++.++.|++||+.+++....+...
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~--~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSN--TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCC--eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 999999875 5556799999999643 34444444 4568999999999987 67778999999999999999988888
Q ss_pred ccEEEEEEcCCCcEE-EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc---CCCeEEEEEccCCe
Q psy17610 295 SMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG---ADQIVKMWMYREGV 370 (515)
Q Consensus 295 ~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~ 370 (515)
..+..++|+|+++.+ +++..++.|++||+++++....+... ..+.+++|+|+++++++++ .++.|++||+.+++
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 889999999999988 56677899999999999888877754 6789999999999999887 68999999999998
Q ss_pred eeeeccCCCCCeeEEEECCCCcEE-EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC-cccEEEee
Q psy17610 371 PCFVGIGHAASITKIKISPDKKVI-VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL-PSMIMSAA 448 (515)
Q Consensus 371 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~ 448 (515)
.+..+..|. .+.+++|+|++++| ++++.|+.|++||+...+............. ........+ ........
T Consensus 236 ~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~ 308 (391)
T 1l0q_A 236 ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYA------SGQFIGSIPVQPVYPSAD 308 (391)
T ss_dssp EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEC------CSSCEEECSSCCCCCBCC
T ss_pred EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCc------cceeeecccccccccccc
Confidence 888887765 57899999999877 5668899999999987542211100000000 000000000 00011112
Q ss_pred eccC--------C--cEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe---ecCC
Q psy17610 449 YHPS--------E--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG---GADQ 506 (515)
Q Consensus 449 ~s~~--------~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~---~~dg 506 (515)
|+.+ . ..+...+.+...++|+..+|.... +. . ....|+|+|.|.++. +.||
T Consensus 309 fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~----~~-~--~~~~~~~~g~y~~~~~~~~~~g 372 (391)
T 1l0q_A 309 FKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSK----KQ-N--PTHTYSETGIYTVRLTVSNSNG 372 (391)
T ss_dssp EEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEEC----SS-S--CEECCSSCEEEEEEEEEEETTE
T ss_pred cccccccccccccceEEEEeCCCCceEEEEECCCCcccC----cC-C--CeEEeCCCceEEEEEEEECCCC
Confidence 2221 1 346666778899999998886421 11 2 235799999887764 3566
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-35 Score=276.68 Aligned_cols=284 Identities=12% Similarity=0.048 Sum_probs=235.4
Q ss_pred ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---eeEEEEecC----------------------------------
Q psy17610 124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---ELLRISVMN---------------------------------- 166 (515)
Q Consensus 124 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~---------------------------------- 166 (515)
..++.+++|+|+|+ +++++.++.|++||+.+++ .+..+..+.
T Consensus 4 ~~p~~~v~~s~dg~-~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGS-LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSS-EEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCC-EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 35789999999998 4555568899999999998 555554322
Q ss_pred --------------------eEEEEEEEeeCCCEE-EEEeCCCeEEEEecC--CCceEEEecC-CCCCCeEEEEEcCCCC
Q psy17610 167 --------------------MICACIVFTYDGKAI-LSGWNDGFIRCFTPQ--SGKLKFIIPN-AHNRGVTALAITQDGT 222 (515)
Q Consensus 167 --------------------~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~ 222 (515)
..|.+++|+|++++| ++++.||.|++||+. +++....+.. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 259999999999996 889999999999999 8887776632 5678999999999999
Q ss_pred EEEEecCCCcEEEEEccCCcee--eEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEEEEEE--cCc
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQS--LQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRLIIMI--LPS 295 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~ 295 (515)
+|++++.+|.+++|++...... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+. +..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 9999999999999998644322 33366789999999999999 9999999999999999999888776643 556
Q ss_pred cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC------------------------CCccEEEEEEcCCCCE
Q psy17610 296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS------------------------DVAAVNCVDFVDDGKY 351 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------------------~~~~i~~~~~~~~~~~ 351 (515)
.+.+++|+ ++++|++++.|+.|++||+.+++.+..+..+ ....+.+++|+|++++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 89999999 9999999999999999999999998888632 1256889999999999
Q ss_pred EEEEc-CCCeEEEEEc--cCC---eeeeeccCCCCCeeEEEECCCCcEEEEE-eC------CCcEEEEeCCCC
Q psy17610 352 FLTGG-ADQIVKMWMY--REG---VPCFVGIGHAASITKIKISPDKKVIVSV-SA------DGGIFLWTFPEL 411 (515)
Q Consensus 352 l~~~~-~dg~i~i~d~--~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~------dg~i~iw~~~~~ 411 (515)
+++++ .++.|++|++ .++ +.+..+..| ..|.+++|+|++ ++++. +. +..|.+|.+...
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence 99998 8999999999 555 667777777 889999999965 44444 32 455899987543
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-34 Score=266.07 Aligned_cols=288 Identities=8% Similarity=0.062 Sum_probs=212.6
Q ss_pred EEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EE
Q psy17610 192 CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MS 270 (515)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 270 (515)
+|++.+.+.+... ..|...|.+++|+|+|++|++|+.++ +++|+... ...... .+...+..+++.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~-~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPE-NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP--VAHIMS--QEMRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETT--EEEEEE--EECSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCcccc-ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC--cceeee--eecCCeEEEEEcCCCCEEEEE
Confidence 4556666665554 68999999999999999999998775 78999853 322222 222357788888888887 56
Q ss_pred EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcCCC
Q psy17610 271 ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 349 (515)
++.|++|++||+.+++.+..+..+..+.++.++++. ++++ .++.|++||+.++ +.+..+.. +...+++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~-- 147 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN-- 147 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--
T ss_pred ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--
Confidence 777899999999999999999999999999998874 3333 4789999999988 66555544 333456666
Q ss_pred CEEEE--EcCCCeEEEEEccCCe---------------e-eeeccCCCCCeeEEEECCCCcEEEEEeCCCc-EEEEeCCC
Q psy17610 350 KYFLT--GGADQIVKMWMYREGV---------------P-CFVGIGHAASITKIKISPDKKVIVSVSADGG-IFLWTFPE 410 (515)
Q Consensus 350 ~~l~~--~~~dg~i~i~d~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iw~~~~ 410 (515)
.++++ |+.+|.|++||++++. + +..+.+|...|++++|+|++++|++++.|++ |++||+.+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 56665 6899999999998765 2 6778899999999999999999999999998 99999976
Q ss_pred CcCccCCCcccceeeecccccccceeee-c-CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee--eee-------
Q psy17610 411 LEDDVGDSRSLSSKISRSTARSTRLIIM-I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII--RSL------- 479 (515)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~------- 479 (515)
.+. ...+. + |...|.+++|+|++++|++++.|+.|++||+.++... ..+
T Consensus 228 ~~~--------------------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 3vu4_A 228 GVL--------------------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK 287 (355)
T ss_dssp CCE--------------------EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred CcE--------------------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence 531 11122 2 6788999999999999999999999999999765321 111
Q ss_pred -------------cccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610 480 -------------EGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI 514 (515)
Q Consensus 480 -------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 514 (515)
......+...++|++|+++|++++.||.+++|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 288 YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 11111234679999999999999999999999874
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=275.58 Aligned_cols=279 Identities=14% Similarity=0.055 Sum_probs=229.5
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEee--------------------------------------
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVN-------------------------------------- 120 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~-------------------------------------- 120 (515)
.++.+++|+|+|++|+++ .++.|++||+.+|+ .+....
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999966655 57799999998876 322211
Q ss_pred ---------------ccCccCeEEEEeCCCCcEE-EEEecCCcEEEEeCC--CCceeEEEE--ecCeEEEEEEEeeCCCE
Q psy17610 121 ---------------TCHTSAIYDLQFPVNFSSV-FATCSKNDIRIWSVR--TLNELLRIS--VMNMICACIVFTYDGKA 180 (515)
Q Consensus 121 ---------------~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 180 (515)
.+|.+.|.+++|+|++++| ++++.|+.|++||+. +++.+..+. .+...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 1344479999999999997 777789999999999 888888876 56688999999999999
Q ss_pred EEEEeCCCeEEEEecCCCceEE----EecCCCCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEe-eccc
Q psy17610 181 ILSGWNDGFIRCFTPQSGKLKF----IIPNAHNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEH 252 (515)
Q Consensus 181 l~~~~~dg~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~ 252 (515)
|++++.+|.+++|++.+++... .+ .+|...|.+++|+|+ +++|++++.|+.|++||+... ..... +.+|
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~h 240 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--FIVDKWLFGH 240 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--TCEEEECCCC
T ss_pred EEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--ceeeeeecCC
Confidence 9999999999999998876542 33 578999999999999 999999999999999999643 33333 5689
Q ss_pred cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--------------------------ccEEEEEEcCCC
Q psy17610 253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--------------------------SMIMSAAYHPSE 306 (515)
Q Consensus 253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~ 306 (515)
...|.+++|+ ++++|++++.|+.|++||+.+++.+..+... ..+..++++|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 9999999999 9999999999999999999999888777532 358899999999
Q ss_pred cEEEEEE-CCCeEEEEeC--CCC---ceEEEEecCCCccEEEEEEcCCCCEEEEEcC------CCeEEEEEcc
Q psy17610 307 VQLITCS-TNKMIDYWET--CDG---SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA------DQIVKMWMYR 367 (515)
Q Consensus 307 ~~l~~~~-~~~~i~~~d~--~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~i~d~~ 367 (515)
+++++++ .++.|++|++ ..+ +.+..+..+ ..+.+++|+|++.++++++. +..|.+|.+.
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999999 8999999999 555 666667765 78999999996544444443 4457787764
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.6e-35 Score=269.27 Aligned_cols=309 Identities=11% Similarity=0.077 Sum_probs=216.8
Q ss_pred EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEec
Q psy17610 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGG 228 (515)
Q Consensus 150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~ 228 (515)
||++.+.+.+.....|...|.+++|+|||++|++|+.++ +++|+.++++...... ...+..+++.++++.+ ++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE---MRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE---CSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee---cCCeEEEEEcCCCCEEEEEEC
Confidence 567777777777888999999999999999999998775 7899999887665542 2257788898888877 5678
Q ss_pred CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc-eEEEEEEcCccEEEEEEcCCCc
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS-TRLIIMILPSMIMSAAYHPSEV 307 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (515)
.|+.|++||..+ ......+. +...|.++.++++. ++++ .|+.|++||+.++ +.+..+.. +...+++++ .
T Consensus 79 ~d~~v~iWd~~~--~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~ 148 (355)
T 3vu4_A 79 VKEVVHIWDDVK--KQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--G 148 (355)
T ss_dssp STTEEEEEETTT--TEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--T
T ss_pred CccEEEEEECCC--CcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--c
Confidence 889999999954 34444444 66789999998763 4443 4789999999887 54444433 444566666 5
Q ss_pred EEEE--EECCCeEEEEeCCCCc---------------e-EEEEecCCCccEEEEEEcCCCCEEEEEcCCCe-EEEEEccC
Q psy17610 308 QLIT--CSTNKMIDYWETCDGS---------------I-IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI-VKMWMYRE 368 (515)
Q Consensus 308 ~l~~--~~~~~~i~~~d~~~~~---------------~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~ 368 (515)
.+++ ++.+|.|++||+.+++ + +..+..|. ..|.+++|+|+|++|++++.|++ |++||+++
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 6665 5789999999999865 1 56666665 89999999999999999999998 99999999
Q ss_pred Ceeeeecc-C-CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCC-cc-cceeeeccccc-ccceeeecCccc
Q psy17610 369 GVPCFVGI-G-HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDS-RS-LSSKISRSTAR-STRLIIMILPSM 443 (515)
Q Consensus 369 ~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~ 443 (515)
++++..+. + |...|++++|+|++++|++++.|+.|++||+.......... .. ........... ............
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR 307 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence 99999987 5 99999999999999999999999999999997653211100 00 00000000000 000000111223
Q ss_pred EEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 473 (515)
...++|+|++++|++++.||.+++|++..+
T Consensus 308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 308 GCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 467899999999999999999999998654
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=299.22 Aligned_cols=255 Identities=15% Similarity=0.216 Sum_probs=211.3
Q ss_pred EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC--CCceeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEE
Q psy17610 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR--TLNELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCF 193 (515)
Q Consensus 118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~ 193 (515)
.++.+|.++|++++|+|+++++++++.||.|++||+. +++.+..+.+|..+|.+++|+|+ +++|++++.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4567899999999999999999999999999999998 55677788899999999999998 9999999999999999
Q ss_pred ecCCCc--eEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-----
Q psy17610 194 TPQSGK--LKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD----- 264 (515)
Q Consensus 194 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 264 (515)
|+.+++ ....+ ..|...|.+++|+|+ ++.+++|+.||.|++||++.........+.+|...|.+++|+|.
T Consensus 83 d~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 999987 45555 689999999999999 99999999999999999986655556677889999999999994
Q ss_pred --------CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610 265 --------SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 336 (515)
Q Consensus 265 --------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~ 336 (515)
+..+++++.||.|++||++++... ......+..+.
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-------------------------------------~~~~~~~~~h~ 204 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-------------------------------------YVLESTLEGHS 204 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTE-------------------------------------EEEEEEECCCS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCccc-------------------------------------ceeeeeecCCC
Confidence 566666666666666665432100 02233444444
Q ss_pred CccEEEEEEcCC---CCEEEEEcCCCeEEEEEccCCe-----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 337 VAAVNCVDFVDD---GKYFLTGGADQIVKMWMYREGV-----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 337 ~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
..|.+++|+|+ ++++++++.||.|++||+.++. .......|...|++++|+|++++|++++.||.|++|++
T Consensus 205 -~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 205 -DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp -SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred -CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 88999999999 9999999999999999998864 33444568899999999999999999999999999999
Q ss_pred CCC
Q psy17610 409 PEL 411 (515)
Q Consensus 409 ~~~ 411 (515)
...
T Consensus 284 ~~~ 286 (753)
T 3jro_A 284 NLE 286 (753)
T ss_dssp CSS
T ss_pred CCC
Confidence 853
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=304.08 Aligned_cols=251 Identities=16% Similarity=0.267 Sum_probs=215.5
Q ss_pred EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS 152 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~ 152 (515)
.+.+|.+.|++++|+|++++|++|+.||.|++||+.++ ......+.+|.++|.+++|+|+ ++.+++++.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 45689999999999999999999999999999999742 3445567789999999999988 89999999999999999
Q ss_pred CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcC-------
Q psy17610 153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQ------- 219 (515)
Q Consensus 153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~------- 219 (515)
+.+++ .+..+..|...|.+++|+|+ ++.+++++.||.|++||+.++.. ...+ ..|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCEEEEEECCCC-----
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCceEEEEecCccccccc
Confidence 99887 67777789999999999999 99999999999999999988732 2333 58999999999999
Q ss_pred ------CCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEE
Q psy17610 220 ------DGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRL 288 (515)
Q Consensus 220 ------~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~ 288 (515)
++..+++|+.||.|++||++.... .....+.+|...|.+++|+|+ ++++++++.||.|++||+.+++..
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 589999999999999999975432 556678899999999999999 899999999999999999876321
Q ss_pred ------EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc
Q psy17610 289 ------IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 327 (515)
Q Consensus 289 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~ 327 (515)
....+...+.+++|+|+++++++++.||.|++|++..+.
T Consensus 243 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 111244578999999999999999999999999998654
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=265.65 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=222.7
Q ss_pred EEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc
Q psy17610 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH 252 (515)
Q Consensus 173 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 252 (515)
.+.+++..+++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|+.|++|+...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------ 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------ 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence 445678899999999999999999998887773 466778888887 99999999999999742
Q ss_pred cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--ccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCce
Q psy17610 253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--SMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSI 328 (515)
Q Consensus 253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~ 328 (515)
.+.+|++.+++.+...... .++.+++++| +++++++++.|+.|++||+++++.
T Consensus 105 -----------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 105 -----------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp -----------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE
T ss_pred -----------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 4567788777766665533 5799999999 999999999999999999999999
Q ss_pred EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee-eeccC-CCCCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610 329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC-FVGIG-HAASITKIKISPDKKVIVSVSADGGIFLW 406 (515)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 406 (515)
......++...+.+++|+|++++|++|+.||.|++||+++++.. ..+.. |..+|++++|+|++.+|++++ |+.|++|
T Consensus 162 ~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iw 240 (343)
T 3lrv_A 162 YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCF 240 (343)
T ss_dssp EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEE
T ss_pred EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEE
Confidence 77776666568999999999999999999999999999999877 77777 999999999999999999999 5599999
Q ss_pred eCCCCcCccCCCcccceeeecccccccceeeecCcccE--EEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccc
Q psy17610 407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI--MSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSD 483 (515)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~ 483 (515)
|++.......... .. .+...+ .+++|+|++++|++++. |+.+++|++.+.......
T Consensus 241 d~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---- 299 (343)
T 3lrv_A 241 DLRKDVGTLAYPT-YT----------------IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---- 299 (343)
T ss_dssp ETTSSTTCBSSCC-CB----------------C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----
T ss_pred EcCCCCcceeecc-cc----------------cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----
Confidence 9987642211100 00 011112 46999999999999998 999999999765433222
Q ss_pred cceEEEEEEcC---CCcEEEEeecCCeEEEEEE
Q psy17610 484 VAAVNCVDFVD---DGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 484 ~~~v~~~~~s~---~~~~l~s~~~dg~v~iw~~ 513 (515)
.++..++|.| +.+.|++++.||.++++-.
T Consensus 300 -~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 300 -DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp -EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred -cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 5678889998 8889999999999988754
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-35 Score=266.65 Aligned_cols=275 Identities=11% Similarity=0.061 Sum_probs=221.6
Q ss_pred EEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe
Q psy17610 88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM 167 (515)
Q Consensus 88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 167 (515)
.+.+++.+|++|+.||.|++||+++++.+.... ...|.++.|+|+ +++++.|++|++|+...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------ 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------ 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence 344678899999999999999999876555443 567888899988 88999999999999764
Q ss_pred EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEEEccCCceee
Q psy17610 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIWKLTRESQSL 245 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~ 245 (515)
.+.+|++.+++.+......|..+|.+++|+| +++++++++.||.|++||++....
T Consensus 105 ---------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-- 161 (343)
T 3lrv_A 105 ---------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-- 161 (343)
T ss_dssp ---------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--
T ss_pred ---------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--
Confidence 4677898888877777668889999999999 999999999999999999964433
Q ss_pred EEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE-EEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610 246 QCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL-IIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYW 321 (515)
Q Consensus 246 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 321 (515)
.... ..|...+.+++|+|++.++++|+.||.|++||+++++.. ..+.. ..++.+++|+|++.+|++++. +.|++|
T Consensus 162 ~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iw 240 (343)
T 3lrv_A 162 YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCF 240 (343)
T ss_dssp EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEE
T ss_pred EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEE
Confidence 3333 345668999999999999999999999999999998876 55544 678999999999999999994 599999
Q ss_pred eCCCCceEEEEecC--CCccE--EEEEEcCCCCEEEEEcC-CCeEEEEEccCCeeeeeccCCCCCeeEEEECC---CCcE
Q psy17610 322 ETCDGSIIRSLEGS--DVAAV--NCVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCFVGIGHAASITKIKISP---DKKV 393 (515)
Q Consensus 322 d~~~~~~~~~~~~~--~~~~i--~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 393 (515)
|+++++.+..+... +...+ .+++|+|+|++|++++. |+.+++|++......... .++..++|.+ +.+.
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 316 (343)
T 3lrv_A 241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTD 316 (343)
T ss_dssp ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCE
T ss_pred EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccce
Confidence 99998776544321 11222 46999999999999888 999999999765443332 5677888988 8899
Q ss_pred EEEEeCCCcEEEEeC
Q psy17610 394 IVSVSADGGIFLWTF 408 (515)
Q Consensus 394 l~~~~~dg~i~iw~~ 408 (515)
+++++.|+.+.++-.
T Consensus 317 l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 317 MDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred eEEEecCCceEEEEe
Confidence 999999999998753
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.8e-34 Score=268.58 Aligned_cols=345 Identities=12% Similarity=0.075 Sum_probs=214.9
Q ss_pred ecCCCcEEEEEEe---cCCCEEEEEecCceEEEEECCCCce-------eEE-eeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610 78 LKDDSGISSLQYN---PVNNKVFVGTVNCEIFLIDMNSGFT-------LTL-VNTCHTSAIYDLQFPVNFSSVFATCSKN 146 (515)
Q Consensus 78 ~~~~~~v~~~~~s---~~~~~l~~~~~d~~i~iw~~~~~~~-------~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 146 (515)
++-+....++.|. |++..+++++.++.|.+|+...... ... ....+..++..+.|++...
T Consensus 12 lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 82 (393)
T 4gq1_A 12 LPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCS--------- 82 (393)
T ss_dssp CCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCE---------
T ss_pred ecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcc---------
Confidence 3445566677773 4444445555677899997643110 000 1111333444444443321
Q ss_pred cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE----ecCCCCCCeEEEEEcC---
Q psy17610 147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI----IPNAHNRGVTALAITQ--- 219 (515)
Q Consensus 147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~--- 219 (515)
.....+........+.+++.+|++++.|++|++||.++++.... ...+|...|++++|+|
T Consensus 83 -------------~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~ 149 (393)
T 4gq1_A 83 -------------YSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYS 149 (393)
T ss_dssp -------------EECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEEC
T ss_pred -------------ccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccc
Confidence 11112333445566778888999999999999999998875432 2368999999999997
Q ss_pred -----CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610 220 -----DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMIL 293 (515)
Q Consensus 220 -----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~ 293 (515)
++++|++++.|++|++||+.. ......+..|..++.+++|+|++. +|++++.|++|++||+++++.......
T Consensus 150 ~~~~~d~~~las~s~D~tv~~Wd~~~--~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 150 ADNRLAEQVIASVGDDCTLIIWRLTD--EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp TTCSEEEEEEEEEETTSEEEEEEEET--TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred cccCCCCCEEEEEECCCeEEEEECCC--CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 789999999999999999953 344556677889999999999875 799999999999999998776544322
Q ss_pred Cc-----cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEc-CCCCEEEEEcCCCeEEEEEcc
Q psy17610 294 PS-----MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFV-DDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 294 ~~-----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~ 367 (515)
.. .+......+. ........+ ...+.++.|+ |+++.+++++.|+.+++||+.
T Consensus 228 ~~~~~~~~~~s~~~~~~---------------------~~~~~~~~~-~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 228 TELVKNPWLLTLNTLPL---------------------VNTCHSSGI-ASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp ---CSCCCSEEEESGGG---------------------C------CC-SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred cCCcccceEEecccccc---------------------eeeeecccc-cccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 11 0111111110 011111222 3677888886 799999999999999999999
Q ss_pred CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610 368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 447 (515)
.++....+..|...+..+.+.|+.+.+..... ....
T Consensus 286 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~ 321 (393)
T 4gq1_A 286 ANNDYNEISDSTMKLGPKNLLPNVQGISLFPS--------------------------------------------LLGA 321 (393)
T ss_dssp ------------------CCSCSEEEECSSCC--------------------------------------------SSCC
T ss_pred cCCCCceEeeecCccccEEEccccccccccCc--------------------------------------------ceeE
Confidence 98888888888888888888877543321110 1112
Q ss_pred eecc--CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610 448 AYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI 514 (515)
Q Consensus 448 ~~s~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 514 (515)
.++| ++.++++|+.||.|++||+.+++++..+..|+ .+|.+++|+|||++||++++|| +.+|++.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG-MPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-SCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-CcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 2333 45577888999999999999999988888887 8999999999999999998777 6666653
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.7e-34 Score=267.89 Aligned_cols=311 Identities=17% Similarity=0.246 Sum_probs=240.2
Q ss_pred cccccccCcceeeeccceEEEEEecCCCcEEEEEEecCC----------CEEEEEec----CceEEEEECC---------
Q psy17610 55 TKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVN----------NKVFVGTV----NCEIFLIDMN--------- 111 (515)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~~~----d~~i~iw~~~--------- 111 (515)
+.+++|.-....+|.. +....-.-+..++.|.|+. .++++|+. .+.|.++++.
T Consensus 23 ~~~~~wk~n~~~~y~~----~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~ 98 (430)
T 2xyi_A 23 EEYKIWKKNTPFLYDL----VMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFD 98 (430)
T ss_dssp HHHHHHHHHHHHHEEE----EEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC-------
T ss_pred HHHhhHhhCChHHHHH----HhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccc
Confidence 4455665554444433 2222334456788888865 46777764 3567777542
Q ss_pred -----------------CCceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCC----------CceeEEEE
Q psy17610 112 -----------------SGFTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRT----------LNELLRIS 163 (515)
Q Consensus 112 -----------------~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~ 163 (515)
+++.......+|.+.|++++|+|+ +..+++++.+|.|++|++.+ .+.+..+.
T Consensus 99 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (430)
T 2xyi_A 99 GSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR 178 (430)
T ss_dssp -------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE
T ss_pred cccccccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec
Confidence 111222344569999999999997 56778888899999999987 67888899
Q ss_pred ecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCce-------EEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEE
Q psy17610 164 VMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKL-------KFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVR 234 (515)
Q Consensus 164 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 234 (515)
+|...+.+++|+|++. +|++++.||.|++|++.++.. ...+ ..|...|.+++|+| ++.+|++++.|+.|+
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 9999999999999998 999999999999999987321 2333 58999999999999 788999999999999
Q ss_pred EEEccCCc-eeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610 235 IWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 235 iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 312 (515)
+||++... ......+..|...|.+++|+|++. .+++++.||.|++||+++..
T Consensus 258 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------------------------- 311 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-------------------------- 311 (430)
T ss_dssp EEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--------------------------
T ss_pred EEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--------------------------
Confidence 99997542 244555668888899999998876 57788888888888876421
Q ss_pred ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccC--------------CeeeeeccC
Q psy17610 313 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYRE--------------GVPCFVGIG 377 (515)
Q Consensus 313 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~ 377 (515)
.++..+..+. ..+.+++|+|+++ +|++++.||.|++||+.. .+.+....+
T Consensus 312 --------------~~~~~~~~h~-~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (430)
T 2xyi_A 312 --------------LKLHSFESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 376 (430)
T ss_dssp --------------SCSEEEECCS-SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC
T ss_pred --------------CCeEEeecCC-CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC
Confidence 2233444444 7899999999885 799999999999999987 356777889
Q ss_pred CCCCeeEEEECCCCc-EEEEEeCCCcEEEEeCCCC
Q psy17610 378 HAASITKIKISPDKK-VIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 378 ~~~~i~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~ 411 (515)
|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 377 h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 377 HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 999999999999999 9999999999999998753
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.8e-33 Score=241.80 Aligned_cols=281 Identities=9% Similarity=0.045 Sum_probs=204.5
Q ss_pred EEEEEEecCCC---EEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610 84 ISSLQYNPVNN---KVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE 158 (515)
Q Consensus 84 v~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 158 (515)
+.++-|-..+- .++++++. .|++|+..++. +......+|+.+|..+.+.||...|++..-.+ +
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~----- 109 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGN------L----- 109 (356)
T ss_dssp EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECS------S-----
T ss_pred EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecc------c-----
Confidence 55566655332 56666655 89999999863 55667788999999999999876665544311 1
Q ss_pred eEEEEecCeEEEEEEEeeC----CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 159 LLRISVMNMICACIVFTYD----GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 159 ~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
+...|.+++++|+ ++.+++++.+ +.+|++.+++.+.....+| |+.|+
T Consensus 110 ------~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~---------------------d~~V~ 160 (356)
T 2w18_A 110 ------EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLS---------------------DQQVE 160 (356)
T ss_dssp ------SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSST---------------------TCEEE
T ss_pred ------cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCC---------------------CCcEE
Confidence 3457889999999 8999998744 7778665555444432334 45555
Q ss_pred EEEccCCceeeEEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceEEEEEEcC----ccEEEEEEcCCCc
Q psy17610 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTRLIIMILP----SMIMSAAYHPSEV 307 (515)
Q Consensus 235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~ 307 (515)
+|++.. .++....+.+|...+..++|++ ++..|++++.|++|++||+++++.+..+..+ ..+.+++|+|++.
T Consensus 161 ~~~~s~-dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~ 239 (356)
T 2w18_A 161 VMTFAE-DGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL 239 (356)
T ss_dssp EEEECT-TSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred EEEECC-CCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence 555531 2233345567888899999999 7899999999999999999999999988643 2567789999998
Q ss_pred EE------------EEEECCCeEEEEeCCCCceEEEEe----cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610 308 QL------------ITCSTNKMIDYWETCDGSIIRSLE----GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP 371 (515)
Q Consensus 308 ~l------------~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 371 (515)
++ ++++.|+++++||..+++.+..+. ..+...+.+..+ ++.++++++.|++|+|||+.+++.
T Consensus 240 ~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 240 LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE
T ss_pred EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 87 457789999999999998877653 122233333333 378899999999999999999999
Q ss_pred eeeccCCCCCee-EEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 372 CFVGIGHAASIT-KIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 372 ~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
+.++.+|...+. .++|+||+++|++|+.|++|++||+
T Consensus 318 l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999987655 6899999999999999999999985
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.7e-33 Score=243.39 Aligned_cols=283 Identities=10% Similarity=0.035 Sum_probs=203.4
Q ss_pred EEEEEEeeCCC---EEEEEeCCCeEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610 169 CACIVFTYDGK---AILSGWNDGFIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242 (515)
Q Consensus 169 v~~~~~~~~~~---~l~~~~~dg~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 242 (515)
+.++.|-..+- .+++++ ...|++|+..++ +...+. ..|+.+|..+.+.||..-|+...- +
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~-----------~- 107 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTW-HFAEVPVLQIVPVPDVYNLVCVAL-----------G- 107 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEE-ECCSSCEEEECCCTTCCSCEEEEE-----------C-
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEE-eccCceeEEEEEcCcccceeeeee-----------c-
Confidence 45566644432 456665 457999999998 777777 689999999999997654443211 0
Q ss_pred eeeEEeeccccCceEEEEEecC----CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--CCC
Q psy17610 243 QSLQCVLKEHTSSVSVIQIKSD----SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--TNK 316 (515)
Q Consensus 243 ~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~ 316 (515)
.-+...|..++++|+ ++.+++++.+ +.+|++. +++.+.++. .++
T Consensus 108 -------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~---------------------~g~lv~ss~~g~d~ 157 (356)
T 2w18_A 108 -------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLT---------------------KRRLVSSSGTLSDQ 157 (356)
T ss_dssp -------SSSEEEEEEECC------CCEEEEEEEEE--EEEEEET---------------------TTEEEEEESSSTTC
T ss_pred -------cccccceEEEEECCCccccccEEEeCCCe--EEEEecC---------------------CCcEEEecccCCCC
Confidence 114567889999999 8999998854 7778653 344444433 488
Q ss_pred eEEEEeC-CCCceEEEEecCCCccEEEEEEcC---CCCEEEEEcCCCeEEEEEccCCeeeeeccCCC---CCeeEEEECC
Q psy17610 317 MIDYWET-CDGSIIRSLEGSDVAAVNCVDFVD---DGKYFLTGGADQIVKMWMYREGVPCFVGIGHA---ASITKIKISP 389 (515)
Q Consensus 317 ~i~~~d~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~ 389 (515)
.|++|++ .+++.+..+..+. ..++.++|+| ++.+|++++.|++|+|||+++++.+.++.+|. ..+.+++|+|
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~-~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp 236 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMP-PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE 236 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECC-CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE
T ss_pred cEEEEEECCCCceeeeeccCC-CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC
Confidence 9999998 4477777777765 7788889999 78999999999999999999999999997654 3677889999
Q ss_pred CCcEE------------EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEE
Q psy17610 390 DKKVI------------VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI 457 (515)
Q Consensus 390 ~~~~l------------~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 457 (515)
+++++ ++|+.|+++++||..+........ .. ...+|...+.+. +.++.++|
T Consensus 237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~------~~---------~p~Gh~~~~lsg--~~sg~~lA 299 (356)
T 2w18_A 237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML------YC---------LPPGQAGRFLEG--DVKDHCAA 299 (356)
T ss_dssp TTEEEEEEC------------CCEEEEEEETTTTEEEEEEE------EC---------CCTTCCCCEEEE--EEETTEEE
T ss_pred CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE------ee---------ccCCCcceeEcc--ccCCCEEE
Confidence 99987 567789999999987654210000 00 001222223333 33377899
Q ss_pred EeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 458 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 458 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
+++.|++|+|||+.+++++.++.+|+...+.+++|+|||++|++|+.|++|+|||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999999999987344556999999999999999999999997
No 127
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.1e-33 Score=262.29 Aligned_cols=246 Identities=15% Similarity=0.238 Sum_probs=207.1
Q ss_pred EeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEccc----------ceEEEEEE-cCccEEEEEEcCCCc-EEEEEE
Q psy17610 247 CVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIK----------STRLIIMI-LPSMIMSAAYHPSEV-QLITCS 313 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~ 313 (515)
.....|.+.|.+++|+|+ +.++++++.||.|++||+.+ ......+. +...+.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445679999999999997 67899999999999999986 44444444 455799999999988 999999
Q ss_pred CCCeEEEEeCCCCce-------EEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC---eeeeeccCCCCCe
Q psy17610 314 TNKMIDYWETCDGSI-------IRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG---VPCFVGIGHAASI 382 (515)
Q Consensus 314 ~~~~i~~~d~~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i 382 (515)
.+|.|++||+..+.. ...+..+. ..+.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHT-AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCS-SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCC-CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999987422 34444444 8899999999 7889999999999999999987 5677778999999
Q ss_pred eEEEECCCCc-EEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEee
Q psy17610 383 TKIKISPDKK-VIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCS 460 (515)
Q Consensus 383 ~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~ 460 (515)
++++|+|+++ +|++++.||.|++||++.... ....+..|...|.+++|+|+++ +|++++
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-------------------~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKL-------------------KLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTS-------------------CSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-------------------CeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 9999999887 789999999999999976421 1122334677899999999995 699999
Q ss_pred cCCeEEEEecCC--------------CeeeeeecccccceEEEEEEcCCCc-EEEEeecCCeEEEEEE
Q psy17610 461 TNKMIDYWETCD--------------GSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKICLY 513 (515)
Q Consensus 461 ~dg~v~iwd~~~--------------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~ 513 (515)
.||.|++||+.. .+++..+.+|. ..|.+++|+|+++ +|++++.||.|++|++
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS-SCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC-CCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 999999999987 35667777776 8899999999999 8999999999999996
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.6e-32 Score=264.13 Aligned_cols=336 Identities=9% Similarity=0.038 Sum_probs=261.7
Q ss_pred EeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec--CCCceEEEecCCC
Q psy17610 131 QFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP--QSGKLKFIIPNAH 208 (515)
Q Consensus 131 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~--~~~~~~~~~~~~~ 208 (515)
+|+|++..+++.+.+++|.+||..+++.+.++..+.. +..++|+|+|++|++++.++.|.+||+ .+++.+..+. +
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--I 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--c
Confidence 4889987788878899999999999999999884443 789999999999999999999999999 8888888874 4
Q ss_pred CCCeEEEEEcC----CCCEEEEecC-CCcEEEEEccCCceeeEEeecc----------ccC-ceEEEEEecCCCE-EEEE
Q psy17610 209 NRGVTALAITQ----DGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKE----------HTS-SVSVIQIKSDSKE-AMSA 271 (515)
Q Consensus 209 ~~~v~~~~~~~----~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~ 271 (515)
...+..++|+| +|+++++++. +++|.+||..+ .+....+.. |.. .+..+.++|++.. +++.
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t--~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc--cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 55689999999 9999998884 89999999854 444444432 223 6889999997765 4566
Q ss_pred eCCCcEEEEEcccceEEE--EEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecC---CCccEEEEEE
Q psy17610 272 STDGTCVLWDLIKSTRLI--IMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGS---DVAAVNCVDF 345 (515)
Q Consensus 272 ~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~ 345 (515)
..++.|.+||+.+.+.+. .+.....+..++|+|+++++++++ .++.|.+||+.+++++..+... +.+....+ +
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~ 377 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-V 377 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-E
T ss_pred CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-C
Confidence 678999999998755333 455556788899999999887665 4889999999999999888752 21222233 4
Q ss_pred cCC-CCEEEEEc-CCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcEEEEEe-------CCCcEEEEeCC
Q psy17610 346 VDD-GKYFLTGG-ADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKVIVSVS-------ADGGIFLWTFP 409 (515)
Q Consensus 346 ~~~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~iw~~~ 409 (515)
+|+ +.+++++. .|++|.+||+.+ .+.+.++..|...+..++++|++++|++++ .+++|.+||+.
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 676 66677765 579999999988 889999999998899999999999999987 26799999998
Q ss_pred CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-----cCCeEEEEecCCCeeeeeecccc
Q psy17610 410 ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-----TNKMIDYWETCDGSIIRSLEGSD 483 (515)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~v~iwd~~~~~~~~~~~~~~ 483 (515)
+.+..... ... ....-+..+...+..+.|+|+|+.++++. .++.|.|||.++++++++++.+.
T Consensus 458 ~~~~~~~~-------~~v----~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 458 NLDAKYQV-------LPI----AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp CTTSCCEE-------ECH----HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred CCCCCeEE-------eec----hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 76521000 000 00000112345689999999999988763 47999999999999999998653
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=8.8e-32 Score=258.95 Aligned_cols=319 Identities=10% Similarity=0.035 Sum_probs=255.6
Q ss_pred EEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC--CCCceeEEEEec
Q psy17610 88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV--RTLNELLRISVM 165 (515)
Q Consensus 88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~ 165 (515)
+|+|++.++++++.+++|.+||..+++.+..+..++. +..++|+|||++|++++.|++|.+||+ .+++.+.++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-
Confidence 4899999999999999999999999766555543444 889999999999999999999999999 88888888874
Q ss_pred CeEEEEEEEee----CCCEEEEEeC-CCeEEEEecCCCceEEEecCC---------CC-CCeEEEEEcCCCCE-EEEecC
Q psy17610 166 NMICACIVFTY----DGKAILSGWN-DGFIRCFTPQSGKLKFIIPNA---------HN-RGVTALAITQDGTR-LLSGGG 229 (515)
Q Consensus 166 ~~~v~~~~~~~----~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~---------~~-~~v~~~~~~~~~~~-l~~~~~ 229 (515)
...+..++|+| +|+++++++. ++.|.+||..+++++..+... |. ..+..+.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 44568999999 9999998884 899999999999988877421 22 37899999997654 556778
Q ss_pred CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcC-----ccEEEEEEc
Q psy17610 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYH 303 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~ 303 (515)
++.|.+||+..........+ .+...+..+.|+|+++++++++ .+++|.+||..+++....+... .....+ ++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 89999999965433222233 3566788899999999877665 5889999999999988877642 222222 47
Q ss_pred CC-CcEEEEEE-CCCeEEEEeCCC-------CceEEEEecCCCccEEEEEEcCCCCEEEEEc-------CCCeEEEEEcc
Q psy17610 304 PS-EVQLITCS-TNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG-------ADQIVKMWMYR 367 (515)
Q Consensus 304 ~~-~~~l~~~~-~~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~ 367 (515)
|+ +..++++. .+++|.+||+.+ .+.++++..+. ..+..++++|++++|++++ .+++|.+||+.
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 77 55555554 579999999998 89999999876 5677899999999999987 26799999999
Q ss_pred CCeee-eec--------cCCCCCeeEEEECCCCcEEEEEe-----CCCcEEEEeCCCCc
Q psy17610 368 EGVPC-FVG--------IGHAASITKIKISPDKKVIVSVS-----ADGGIFLWTFPELE 412 (515)
Q Consensus 368 ~~~~~-~~~--------~~~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~ 412 (515)
+++.. ..+ ..+...+..++|+|+|+.|+++. .|+.|.+||..+.+
T Consensus 458 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 458 NLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 88766 332 35678899999999999998763 47999999998765
No 130
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.8e-33 Score=261.79 Aligned_cols=263 Identities=12% Similarity=0.059 Sum_probs=187.2
Q ss_pred EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeE----EeeccCccCeEEEEeCC--------CCcEEEEEec
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT----LVNTCHTSAIYDLQFPV--------NFSSVFATCS 144 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~h~~~v~~~~~~~--------~~~~l~~~~~ 144 (515)
...|...+....+++++.+||+|+.|++|++||.+++.... ..+.+|.+.|.+++|+| |++.|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 34566667777778889999999999999999998864432 34678999999999998 7889999999
Q ss_pred CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEe-------------------
Q psy17610 145 KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFII------------------- 204 (515)
Q Consensus 145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~------------------- 204 (515)
|++|+|||+.++.++..+..|..++.+++|+|++. +|++++.|+.|++||+.+++.....
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 99999999999988888999999999999999874 7999999999999999887653322
Q ss_pred -----cCCCCCCeEEEEEc-CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610 205 -----PNAHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV 278 (515)
Q Consensus 205 -----~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 278 (515)
..+|...+.++.|. ++++.+++++.|+.+++||+.. ......+..|...+..+.+.|+.+.+...
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 315 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA--NNDYNEISDSTMKLGPKNLLPNVQGISLF------- 315 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECSS-------
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc--CCCCceEeeecCccccEEEcccccccccc-------
Confidence 13577788899987 6999999999999999999953 34444556677667666666654322111
Q ss_pred EEEcccceEEEEEEcCccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610 279 LWDLIKSTRLIIMILPSMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 356 (515)
.......++| ++.++++++.|+.|++||..+++....+..+. .+|.+++|+|||++||+++
T Consensus 316 ----------------~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 316 ----------------PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG-MPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp ----------------CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-SCEEEEEECTTSSEEEEEE
T ss_pred ----------------CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-CcEEEEEEcCCCCEEEEEe
Confidence 1111122333 34456677889999999999999888887776 7999999999999999998
Q ss_pred CCCeEEEEEc
Q psy17610 357 ADQIVKMWMY 366 (515)
Q Consensus 357 ~dg~i~i~d~ 366 (515)
.+| +.+|.+
T Consensus 379 ~~G-v~lvrL 387 (393)
T 4gq1_A 379 EGS-VLLTRL 387 (393)
T ss_dssp SSE-EEEEEE
T ss_pred CCC-eEEEEE
Confidence 766 556654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=2.8e-31 Score=248.27 Aligned_cols=301 Identities=12% Similarity=0.079 Sum_probs=240.4
Q ss_pred CcEEEEEEecCCC-EEEEEe----cCc----eEEEEEC--CCCcee-EEeeccCccCeEEEEeCC--------------C
Q psy17610 82 SGISSLQYNPVNN-KVFVGT----VNC----EIFLIDM--NSGFTL-TLVNTCHTSAIYDLQFPV--------------N 135 (515)
Q Consensus 82 ~~v~~~~~s~~~~-~l~~~~----~d~----~i~iw~~--~~~~~~-~~~~~~h~~~v~~~~~~~--------------~ 135 (515)
..+...+|++.|. ++++|+ .+| .|++||+ .+++.+ ...+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677888888775 565776 457 8999999 887654 245677888888887764 2
Q ss_pred CcEEEEEecC------CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecC
Q psy17610 136 FSSVFATCSK------NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPN 206 (515)
Q Consensus 136 ~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~ 206 (515)
+..++.++.+ +.|++||++ +.....+..|...+.+++|+|+|++|++++.++ .|++||+.+++.... .
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l--~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--A 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--E
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe--e
Confidence 5677777664 799999997 456778888999999999999999999999875 999999999987643 4
Q ss_pred CCCCCeEEEEEcCCCCEEE-EecCCCc--EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-C--cEEEE
Q psy17610 207 AHNRGVTALAITQDGTRLL-SGGGEGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-G--TCVLW 280 (515)
Q Consensus 207 ~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iw 280 (515)
.|...+.+++|+|+|+.|+ +++.++. |++||+.... . ..+..|...+..++|+||+++|++++.+ + .|.+|
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 6778899999999999888 6666554 8999985432 2 4566788899999999999999988864 4 68888
Q ss_pred EcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
|+.+++..........+..++|+|++++|++++.+ ..|++||+.+++.. .+..+ ..+.+++|+|+|++|++++.
T Consensus 297 d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~--~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 297 NINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST--FLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp ETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS--SSCEEEEECTTSSEEEEEEE
T ss_pred ECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC--CCcCCeEEcCCCCEEEEEEc
Confidence 98887754444445678899999999999988764 68999999988763 34433 37889999999999998887
Q ss_pred CC---eEEEEEccCCeeeeeccCCCCCeeEEEECCCCc
Q psy17610 358 DQ---IVKMWMYREGVPCFVGIGHAASITKIKISPDKK 392 (515)
Q Consensus 358 dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 392 (515)
++ .|++||+. +.....+..|.+.|.+++|+|...
T Consensus 374 ~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 374 QGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp ETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 76 79999986 556778889999999999999643
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2e-30 Score=262.72 Aligned_cols=322 Identities=10% Similarity=0.068 Sum_probs=244.5
Q ss_pred CCcEEEEEEecCCCEEEEEec-Cc-----eEEEEECCCCceeEEeeccCc------------------------cCeEEE
Q psy17610 81 DSGISSLQYNPVNNKVFVGTV-NC-----EIFLIDMNSGFTLTLVNTCHT------------------------SAIYDL 130 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~h~------------------------~~v~~~ 130 (515)
...+.+++|||||++|++++. |+ .|++||+.+++... ....+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 567999999999999999998 88 89999999875443 333333 238899
Q ss_pred EeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC
Q psy17610 131 QFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH 208 (515)
Q Consensus 131 ~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~ 208 (515)
+|+|||++|++++. +.|.+||+.+++ ....+..+...+..++|+|||++|+.++ ++.|++||+.+++..... ..+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~-~~~ 191 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT-ADG 191 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC-CCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec-cCC
Confidence 99999999998886 999999999873 4555666778899999999999999887 468999999998776544 333
Q ss_pred CCC----------------eEEEEEcCCCCEEEEecCCC---------------------------------cEEEEEcc
Q psy17610 209 NRG----------------VTALAITQDGTRLLSGGGEG---------------------------------QVRIWKLT 239 (515)
Q Consensus 209 ~~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iw~~~ 239 (515)
... +..++|+|||++|++++.|+ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 332 47799999999999987665 78888886
Q ss_pred C-CceeeEEeeccccCceEEEEEecCCCEEEEEeC-----CCcEEEEEcccceEEEEEEcCc-----cEEEEEEcCCCcE
Q psy17610 240 R-ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-----DGTCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSEVQ 308 (515)
Q Consensus 240 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 308 (515)
. ...........|...+..++| |||++|++++. +..|++||+.+++....+.... .+..++|+|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 4 332222111247788999999 99999987764 5679999999988776665433 3457899999998
Q ss_pred EEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEE-EEcCCCCEEEE-EcCCC--eEEEEEccC-CeeeeeccCCCCCe
Q psy17610 309 LITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCV-DFVDDGKYFLT-GGADQ--IVKMWMYRE-GVPCFVGIGHAASI 382 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~-~~~dg--~i~i~d~~~-~~~~~~~~~~~~~i 382 (515)
++++..++..++|... .++ ...+..+. ..+..+ .|+|+|+.++. ++.++ .+++|++.. +.....+.. ...+
T Consensus 351 ~~~~~~~g~~~l~~~~~~~~-~~~l~~~~-~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~ 427 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDSKGK-AAALTHGN-WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGM 427 (741)
T ss_dssp EEEECTTSSCEEEEECSSSC-EEESCCSS-SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSE
T ss_pred EEEecCCCccEEEEEcCCCC-eeeeeecc-eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCc
Confidence 8888888877777654 344 55665554 667776 59999987754 45555 899999864 554555554 6678
Q ss_pred eEEEECCCCcEEEEEeCC----CcEEEEeCCC
Q psy17610 383 TKIKISPDKKVIVSVSAD----GGIFLWTFPE 410 (515)
Q Consensus 383 ~~~~~~~~~~~l~~~~~d----g~i~iw~~~~ 410 (515)
..++|+||+++|+....+ ..+.+|+...
T Consensus 428 ~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 428 HSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred eEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 899999999988876543 4688888754
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=8.6e-30 Score=238.16 Aligned_cols=302 Identities=12% Similarity=0.030 Sum_probs=231.8
Q ss_pred CccCeEEEEeCCCCcEEE-EEe----cCC----cEEEEeC--CCCcee--EEEEecCeEEEEEEEee-------------
Q psy17610 123 HTSAIYDLQFPVNFSSVF-ATC----SKN----DIRIWSV--RTLNEL--LRISVMNMICACIVFTY------------- 176 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~-~~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~------------- 176 (515)
+...+....|.+.+..++ +++ .+| .+++||+ .+++++ ..+.+|...+..+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 335677888988886555 554 367 8999999 898877 45778877777666664
Q ss_pred -CCCEEEEEeCC------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC---cEEEEEccCCceeeE
Q psy17610 177 -DGKAILSGWND------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG---QVRIWKLTRESQSLQ 246 (515)
Q Consensus 177 -~~~~l~~~~~d------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~ 246 (515)
.+..++.++.+ +.|++||++.+.. ..+ ..|...+.+++|+|+|+.|++++.++ .|++||+.+...
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--- 215 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-FVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--- 215 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSC-EEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCC-EEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE---
Confidence 15667766654 7999999986554 344 46889999999999999999998875 999999964432
Q ss_pred EeeccccCceEEEEEecCCCEEE-EEeCCCc--EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC-C--eEEE
Q psy17610 247 CVLKEHTSSVSVIQIKSDSKEAM-SASTDGT--CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-K--MIDY 320 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~i~~ 320 (515)
..+..|...+.+++|+|||+.|+ +++.++. |++||+.+++......+...+.+++|+|+++.|++++.+ + .|++
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 24566788899999999999888 5665554 999999988775555556689999999999999988864 4 7888
Q ss_pred EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 397 (515)
||+.+++.. .+..+. ..+.+++|+|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|++++|+++
T Consensus 296 ~d~~~~~~~-~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 296 VNINGGAPQ-RITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp EETTSSCCE-ECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred EECCCCCEE-EEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence 899887643 333333 678899999999999988764 58999999988764 455554 89999999999999998
Q ss_pred eCCC---cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610 398 SADG---GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV 454 (515)
Q Consensus 398 ~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 454 (515)
+.++ .|.+||+.... ...+..+...|.+++|+|...
T Consensus 372 s~~~~~~~l~~~d~~g~~---------------------~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTDGRF---------------------KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEETTEEEEEEEETTSCC---------------------EEECCCSSSEEEEEEECCCCC
T ss_pred EcCCCccEEEEEECCCCc---------------------EEEeeCCCCCCcCCccccccc
Confidence 8877 79999986432 122334567799999999754
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.5e-29 Score=256.39 Aligned_cols=322 Identities=9% Similarity=0.053 Sum_probs=243.3
Q ss_pred ccCeEEEEeCCCCcEEEEEec-CC-----cEEEEeCCCCceeEEEEecC------------------------eEEEEEE
Q psy17610 124 TSAIYDLQFPVNFSSVFATCS-KN-----DIRIWSVRTLNELLRISVMN------------------------MICACIV 173 (515)
Q Consensus 124 ~~~v~~~~~~~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~~~ 173 (515)
...+.+++|+|||++|++++. |+ .|.+||+.+++....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 89999999988766665432 3478899
Q ss_pred EeeCCCEEEEEeCCCeEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec
Q psy17610 174 FTYDGKAILSGWNDGFIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK 250 (515)
Q Consensus 174 ~~~~~~~l~~~~~dg~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 250 (515)
|+|||++|++++. +.|.+||+.++ +.. .+ ..|...+..++|+|||++|+.++. +.|++||+... .......
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l-~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g--~~~~~~~ 189 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QL-THGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG--RQMQLTA 189 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BC-CCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT--EEEECCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEE-Ec-ccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC--CEEEecc
Confidence 9999999999886 89999999988 443 33 467788999999999999998874 68999999643 2332223
Q ss_pred cccCc----------------eEEEEEecCCCEEEEEeCCC---------------------------------cEEEEE
Q psy17610 251 EHTSS----------------VSVIQIKSDSKEAMSASTDG---------------------------------TCVLWD 281 (515)
Q Consensus 251 ~~~~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iwd 281 (515)
.+... +..+.|+|||++|++++.|+ .|.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 23221 47799999999999988765 789999
Q ss_pred ccc-ceEEEEEE---cCccEEEEEEcCCCcEEEEEEC-----CCeEEEEeCCCCceEEEEecCCCc---cEEEEEEcCCC
Q psy17610 282 LIK-STRLIIMI---LPSMIMSAAYHPSEVQLITCST-----NKMIDYWETCDGSIIRSLEGSDVA---AVNCVDFVDDG 349 (515)
Q Consensus 282 ~~~-~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~---~i~~~~~~~~~ 349 (515)
+.+ ++...... ....+..++| ||++.|+++.. +..|++||+.+++....+..+... .+..++|+|||
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 988 76554432 3356899999 99999987764 568999999999887766654322 34688999999
Q ss_pred CEEEEEcCCCeEEEEEcc-CCeeeeeccCCCCCeeEE-EECCCCcEEEEE-eCCC--cEEEEeCCCCcCccCCCccccee
Q psy17610 350 KYFLTGGADQIVKMWMYR-EGVPCFVGIGHAASITKI-KISPDKKVIVSV-SADG--GIFLWTFPELEDDVGDSRSLSSK 424 (515)
Q Consensus 350 ~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~-~~dg--~i~iw~~~~~~~~~~~~~~~~~~ 424 (515)
+++++++.+|.++||.+. .+. ...+..|...+..+ .|+|+++.|+.. +.++ .+++|++...... ...
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~---~~~---- 420 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ---PQR---- 420 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC---CEE----
T ss_pred eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC---eee----
Confidence 999999999988888765 344 77777888888887 599999877654 4455 8999987532110 000
Q ss_pred eecccccccceeeecCcccEEEeeeccCCcEEEEeecC----CeEEEEecCCC
Q psy17610 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN----KMIDYWETCDG 473 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~ 473 (515)
+. ....+..++|+|||++|+....+ +.+++|+...+
T Consensus 421 ------------l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 421 ------------LS-KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp ------------CC-CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred ------------cc-cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 00 12346789999999988876544 56889987543
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=7.7e-30 Score=257.76 Aligned_cols=363 Identities=12% Similarity=0.061 Sum_probs=252.2
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCcc---CeEEEEeCCCCcEEEEEecC---------CcEE
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---AIYDLQFPVNFSSVFATCSK---------NDIR 149 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d---------~~i~ 149 (515)
..+.+++|+|||+++++ +.||.|++||+.+++.. ..+.+|.. .|.+++|||||++|++++.+ +.+.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34678899999997776 78999999999987544 44555654 49999999999999999764 6788
Q ss_pred EEeCCCCceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC---------------
Q psy17610 150 IWSVRTLNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG--------------- 211 (515)
Q Consensus 150 iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~--------------- 211 (515)
+||+.+++. ..+.. +...+..++|+|||+.|+.++. +.|++||+.+++..... ..+...
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~-~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV-STGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE-CCCBTTTEEEEECCHHHHHTT
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe-cCCCCCceECcccceeEEEEe
Confidence 999998875 33432 3334788999999999999886 78999999998877655 333332
Q ss_pred ---eEEEEEcCCCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610 212 ---VTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 212 ---v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
+.+++|+|||+.|++++.+ +.+.+|++..... .+...+..+.|.++|.. ..+..|++||+.+++.
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~ 240 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-------SIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTH 240 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-------SSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCC
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-------cCCCcceeccCCCCCCC----CCeeEEEEEECCCCce
Confidence 3789999999999988754 4677888742221 12345778888887763 3345899999998875
Q ss_pred EEEEEc-------CccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCceEEEEecCCCccE----EEEEEcCCCCEE
Q psy17610 288 LIIMIL-------PSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGSIIRSLEGSDVAAV----NCVDFVDDGKYF 352 (515)
Q Consensus 288 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l 352 (515)
...+.. ...+..++|+||++.+++... +..|++||+.+++....+..++...+ ..++|+|||+.|
T Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 241 DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeE
Confidence 444443 346889999999998877653 35799999999987766654332333 378999999977
Q ss_pred EE--EcCCC------eEEEEE-ccCCee--eeeccCCCCCeeE-EEECCCCcEEEEEeCC---CcEEEEeCCCCcCccCC
Q psy17610 353 LT--GGADQ------IVKMWM-YREGVP--CFVGIGHAASITK-IKISPDKKVIVSVSAD---GGIFLWTFPELEDDVGD 417 (515)
Q Consensus 353 ~~--~~~dg------~i~i~d-~~~~~~--~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~ 417 (515)
+. +..++ .|.+|| ..+++. ...+..+...+.. ++|+||++.|+..+.+ +.+++|++.......
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~-- 398 (723)
T 1xfd_A 321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN-- 398 (723)
T ss_dssp EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC--
T ss_pred EEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC--
Confidence 65 45666 566777 344431 4455444445554 6999999999876655 789999986432100
Q ss_pred CcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC-C--eEEEEecCCCee
Q psy17610 418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-K--MIDYWETCDGSI 475 (515)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~v~iwd~~~~~~ 475 (515)
...+.. ...+...+..++|+|||++++..... . ...+++..+++.
T Consensus 399 ~~~l~~-------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~ 446 (723)
T 1xfd_A 399 RQCLSC-------------DLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKK 446 (723)
T ss_dssp CBCSST-------------TSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCE
T ss_pred cceecc-------------cccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCE
Confidence 000000 00023447789999999988865432 2 234455544443
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=1.8e-28 Score=246.86 Aligned_cols=317 Identities=11% Similarity=0.103 Sum_probs=228.0
Q ss_pred eEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee-EEEEecC-----------------eEEEEEEEeeCCCEEEEEeCCC
Q psy17610 127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL-LRISVMN-----------------MICACIVFTYDGKAILSGWNDG 188 (515)
Q Consensus 127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~dg 188 (515)
+..+.|. +..+++.+.++ | +||+.+++.+ ..+..+. ..+.+++|+|| +.++.+. ++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence 4557777 56777777777 8 9999999873 4444333 45899999999 6666654 59
Q ss_pred eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC---ceeeEEeeccccCc----------
Q psy17610 189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE---SQSLQCVLKEHTSS---------- 255 (515)
Q Consensus 189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~~~---------- 255 (515)
.+++||+.+++..... .+...+.+++|+|+|+.|+++ .++.|++|++... ..........+...
T Consensus 102 ~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp EEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred EEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 9999999998776544 456778899999999999985 6799999999640 02222222323222
Q ss_pred ----eEEEEEecCCCEEEEEe---------------------------------CCCcEEEEEcccceEEEEEE---cCc
Q psy17610 256 ----VSVIQIKSDSKEAMSAS---------------------------------TDGTCVLWDLIKSTRLIIMI---LPS 295 (515)
Q Consensus 256 ----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iwd~~~~~~~~~~~---~~~ 295 (515)
+..+.|+|||++|++++ .+..|.+||+.+++...... ...
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 47899999999999987 44679999999887655442 234
Q ss_pred cEEEEEEcCCCcEEEEEECCC-----eEEEEeCCCCceEEEEe-cCCCc---cEEEEEEcC--CCCEEEEEcCCCeEEEE
Q psy17610 296 MIMSAAYHPSEVQLITCSTNK-----MIDYWETCDGSIIRSLE-GSDVA---AVNCVDFVD--DGKYFLTGGADQIVKMW 364 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~~~~~~~~~~-~~~~~---~i~~~~~~~--~~~~l~~~~~dg~i~i~ 364 (515)
.+..++|+|+++.+++++.++ .|.+||+.+++....+. ..... .+..++|+| ||++++++..++.+++|
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 689999999999999887765 89999999984444332 22111 246789999 99999999999999999
Q ss_pred Ecc-CCeeeeeccCCCCCeeE-EEECCCCcEEEEEeCC-C----cEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610 365 MYR-EGVPCFVGIGHAASITK-IKISPDKKVIVSVSAD-G----GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII 437 (515)
Q Consensus 365 d~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d-g----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (515)
+++ ++.....+..|...+.. ++|+|+++.|+.++.+ + .|..|++...... .
T Consensus 339 ~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~----------------------~ 396 (706)
T 2z3z_A 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK----------------------D 396 (706)
T ss_dssp EEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE----------------------E
T ss_pred EEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce----------------------e
Confidence 886 56777778788888877 7999999888766554 3 4555565442210 0
Q ss_pred ecCcccEEEeeeccCCcEEEEeecC----CeEEEEecCCCe
Q psy17610 438 MILPSMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGS 474 (515)
Q Consensus 438 ~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~~ 474 (515)
..+...+..++|+|||++++....+ +.|++||+.+++
T Consensus 397 l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 397 LTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 0123447889999999988876544 569999998887
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.1e-27 Score=241.19 Aligned_cols=316 Identities=9% Similarity=0.036 Sum_probs=229.5
Q ss_pred EEEEEEecCCCEEEEEecCceEEEEECCCCcee-EEeeccCc-----------------cCeEEEEeCCCCcEEEEEecC
Q psy17610 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHT-----------------SAIYDLQFPVNFSSVFATCSK 145 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~h~-----------------~~v~~~~~~~~~~~l~~~~~d 145 (515)
+..+.|+ |+.+++++.++ | +||+.+++.+ ..... |. ..|.+++|+|| +.++.+ .+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~-~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~ 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFS-AADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ 100 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEE-HHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeec-hhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence 4457777 66777777787 8 9999997652 33332 22 46999999999 666666 45
Q ss_pred CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-----CceEEEecCCCCCC---------
Q psy17610 146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-----GKLKFIIPNAHNRG--------- 211 (515)
Q Consensus 146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-----~~~~~~~~~~~~~~--------- 211 (515)
+.+++||+.+++. ..+..+...+.+++|+|||++|+++ .++.|++|++.+ ++..... ..+...
T Consensus 101 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~-~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 GGLVGFDMLARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT-IDGTETLVYGQAVHQ 177 (706)
T ss_dssp TEEEEEETTTTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC-SCCBTTEEESSCCGG
T ss_pred CEEEEEECCCCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec-cCCCCCeEcccchhh
Confidence 9999999988755 4455566678889999999999985 679999999998 7776544 233332
Q ss_pred -----eEEEEEcCCCCEEEEec---------------------------------CCCcEEEEEccCCceeeEEeecccc
Q psy17610 212 -----VTALAITQDGTRLLSGG---------------------------------GEGQVRIWKLTRESQSLQCVLKEHT 253 (515)
Q Consensus 212 -----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iw~~~~~~~~~~~~~~~~~ 253 (515)
+.++.|+|||++|++++ .+..|.+||+.............|.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 47899999999999887 4467999999654332222223566
Q ss_pred CceEEEEEecCCCEEEEEeCCC-----cEEEEEcccc-eEEEEEEc--Cc---cEEEEEEcC--CCcEEEEEECCCeEEE
Q psy17610 254 SSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKS-TRLIIMIL--PS---MIMSAAYHP--SEVQLITCSTNKMIDY 320 (515)
Q Consensus 254 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~-~~~~~~~~--~~---~~~~~~~~~--~~~~l~~~~~~~~i~~ 320 (515)
..+..++|+||++.+++++.++ .|.+||+.++ ........ .. .+..++|+| ++++++++..++.+++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 7899999999999999988775 8999999988 43333221 11 235689999 9999998988998888
Q ss_pred EeCC-CCceEEEEecCCCccEEE-EEEcCCCCEEEEEcC-CC----eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcE
Q psy17610 321 WETC-DGSIIRSLEGSDVAAVNC-VDFVDDGKYFLTGGA-DQ----IVKMWMYREGVPCFVGIGHAASITKIKISPDKKV 393 (515)
Q Consensus 321 ~d~~-~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 393 (515)
|++. ++..+..+..+. ..+.. ++|+|+|+.|+.++. ++ .|..||..+++ ...+ .|...+.+++|+||+++
T Consensus 338 ~~~~~~~~~~~~l~~~~-~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l-~~~~~~~~~~~spdg~~ 414 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGE-WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL-TPESGMHRTQLSPDGSA 414 (706)
T ss_dssp EEEETTSCEEEECCCSS-SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES-CCSSSEEEEEECTTSSE
T ss_pred EEEECCCCEEEecCCCC-eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec-cCCCceEEEEECCCCCE
Confidence 8876 566677776554 55665 799999988765544 44 67777777665 3333 36777999999999998
Q ss_pred EEEEeCC----CcEEEEeCCCCc
Q psy17610 394 IVSVSAD----GGIFLWTFPELE 412 (515)
Q Consensus 394 l~~~~~d----g~i~iw~~~~~~ 412 (515)
++....+ +.+.+||+...+
T Consensus 415 l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 415 IIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEecCCCCCcEEEEEECCCCe
Confidence 8876543 469999987653
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=6.3e-29 Score=251.11 Aligned_cols=348 Identities=12% Similarity=0.069 Sum_probs=240.8
Q ss_pred cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEeCC---------CeEEE
Q psy17610 125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGWND---------GFIRC 192 (515)
Q Consensus 125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------g~i~~ 192 (515)
..+.+++|+|||+++++ +.|++|++||+.+++....+..+.. .+.+++|+|||++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34678999999986654 7799999999999988777765554 38899999999999998764 78889
Q ss_pred EecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCc----------------
Q psy17610 193 FTPQSGKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS---------------- 255 (515)
Q Consensus 193 ~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---------------- 255 (515)
||+.+++..... ...|...+..++|+|||+.|+.++. +.|++||+..... ......+...
T Consensus 96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC--EEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce--EEEecCCCCCceECcccceeEEEEec
Confidence 999998863221 1234445889999999999998876 7899999864432 3333333322
Q ss_pred --eEEEEEecCCCEEEEEeCC-CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610 256 --VSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 256 --v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~ 332 (515)
+..++|+|||+.|++++.+ +.+.+|++..... .....+..+.+.++|.. ..+..|++||+.+++....+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG----SIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS----SSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEEC
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCC----cCCCcceeccCCCCCCC----CCeeEEEEEECCCCceeEEe
Confidence 3789999999999988765 4677777643211 01224677778777652 23458999999998866666
Q ss_pred ecC-----CCccEEEEEEcCCCCEEEEEcC----CCeEEEEEccCCeeeeeccC-CCCCe----eEEEECCCCcEEEE--
Q psy17610 333 EGS-----DVAAVNCVDFVDDGKYFLTGGA----DQIVKMWMYREGVPCFVGIG-HAASI----TKIKISPDKKVIVS-- 396 (515)
Q Consensus 333 ~~~-----~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~~-- 396 (515)
..+ +...+..++|+|||+++++... +..|++||+.+++....+.. +...+ ..++|+|||+.|+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 324 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIR 324 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEE
Confidence 543 1367899999999998876643 35799999998876665543 33433 37899999997775
Q ss_pred EeCCC------cEEEEeC-CCCcCccCCCcccceeeecccccccceeeecCcccEE-EeeeccCCcEEEEeecC---CeE
Q psy17610 397 VSADG------GIFLWTF-PELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM-SAAYHPSEVQLITCSTN---KMI 465 (515)
Q Consensus 397 ~~~dg------~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~d---g~v 465 (515)
...++ .|.+||+ ...... ....+ ......+. .++|+|||+.|+..+.+ +.+
T Consensus 325 ~~~~~~~~~~~~l~~~d~~~~~~~~--~~~~l----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 386 (723)
T 1xfd_A 325 AIPQGGRGKFYHITVSSSQPNSSND--NIQSI----------------TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRR 386 (723)
T ss_dssp EECCSSSSCEEEEEEECSSCCSSSC--CCCBS----------------CCSSSCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred ecccCCCcceeEEEEEeccCCCCcc--ceeEe----------------ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcce
Confidence 44566 4666663 222100 00000 00111133 36899999999766555 789
Q ss_pred EEEecCCCe--eeeeecc---cccceEEEEEEcCCCcEEEEee
Q psy17610 466 DYWETCDGS--IIRSLEG---SDVAAVNCVDFVDDGKYFLTGG 503 (515)
Q Consensus 466 ~iwd~~~~~--~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~ 503 (515)
++|++.... ....+.. +. ..+..++|+|||++|+...
T Consensus 387 ~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 387 QLYSANTVGNFNRQCLSCDLVEN-CTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEEECSSTTCCCBCSSTTSSSS-CCCCEEEECTTSSEEEEEC
T ss_pred EEEEEeCCCCCCcceecccccCC-CCeEEEEECCCCCEEEEEc
Confidence 999986432 3334443 33 6688999999999888643
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.1e-26 Score=212.81 Aligned_cols=297 Identities=13% Similarity=0.107 Sum_probs=207.3
Q ss_pred EEEEeCCCeEEEEecC-CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-CcEEEEEcc--CCceeeEEeeccccCce
Q psy17610 181 ILSGWNDGFIRCFTPQ-SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLT--RESQSLQCVLKEHTSSV 256 (515)
Q Consensus 181 l~~~~~dg~i~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~--~~~~~~~~~~~~~~~~v 256 (515)
+++++.++.|++|++. +++........+...+.+++|+|++++|++++.+ +.|.+|+++ .........+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 3444779999999995 3432222113577788999999999988888876 999999996 33333444444443 78
Q ss_pred EEEEEecCCCEEEEEeC-CCcEEEEEc---ccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCC-CceEE
Q psy17610 257 SVIQIKSDSKEAMSAST-DGTCVLWDL---IKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCD-GSIIR 330 (515)
Q Consensus 257 ~~~~~~~~~~~l~~~~~-d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~-~~~~~ 330 (515)
..++|+|+++++++++. ++.|.+||+ ...+....+.....+..++|+|+++++++++ .++.|.+||+.+ ++...
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 89999999998877765 788999999 5555666666666789999999999888887 889999999987 55432
Q ss_pred ----EEecCCCccEEEEEEcCCCCEEEEE-cCCCeEEEEEccC--Cee--eeec---cCC---CCCeeEEEECCCCcEEE
Q psy17610 331 ----SLEGSDVAAVNCVDFVDDGKYFLTG-GADQIVKMWMYRE--GVP--CFVG---IGH---AASITKIKISPDKKVIV 395 (515)
Q Consensus 331 ----~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~---~~~---~~~i~~~~~~~~~~~l~ 395 (515)
....+....+..++|+|++++++++ ..++.+.+|++.. ++. .... ... ...+..++|+|++++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 3344333578899999999977554 4789999999953 322 2222 111 23567899999998887
Q ss_pred EE-eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCCeEEEEec--C
Q psy17610 396 SV-SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWET--C 471 (515)
Q Consensus 396 ~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~--~ 471 (515)
++ ..++.|.+|++......... ..... ....+..++|+|++++|++++ .++.|.+|++ .
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~----------------~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSK----------------EGFQP-TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEE----------------EEEEE-CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred EEecCCCEEEEEEEcCCCCceEE----------------eeeec-CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 54 47899999998732110000 00011 112277899999999888887 6799999954 4
Q ss_pred CCee--eeeecccccceEEEEEEcCCCc
Q psy17610 472 DGSI--IRSLEGSDVAAVNCVDFVDDGK 497 (515)
Q Consensus 472 ~~~~--~~~~~~~~~~~v~~~~~s~~~~ 497 (515)
+++. +..+... ....+++|.|+.+
T Consensus 310 ~g~~~~~~~~~~g--~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 310 QGLLHEKGRYAVG--QGPMWVVVNAHEG 335 (343)
T ss_dssp TTEEEEEEEEECS--SSCCEEEEEEEC-
T ss_pred CceeeEccccccC--CCCeeEEEEcccC
Confidence 6643 3444432 4566778877654
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=1.9e-26 Score=209.93 Aligned_cols=280 Identities=11% Similarity=0.092 Sum_probs=208.5
Q ss_pred EEEecCCCE-EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCce-eEEEE
Q psy17610 87 LQYNPVNNK-VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNE-LLRIS 163 (515)
Q Consensus 87 ~~~s~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~ 163 (515)
..|.+++++ ++++..++.|.+||.++++...... .+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 356666665 5667778999999999976555444 345556 9999999998888777 88999999999987 77777
Q ss_pred ecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCc-EEEEEc
Q psy17610 164 VMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQ-VRIWKL 238 (515)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~iw~~ 238 (515)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+. ......+++|+|+|++++++ ..++. +.+|++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 7766666599999999999555553 89999999999887763 34557999999999865554 55578 999998
Q ss_pred cCCceeeE--EeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceE---EEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610 239 TRESQSLQ--CVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTR---LIIMILPSMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 239 ~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 312 (515)
........ ............++|+|++++++.++ .++.|.+||+.+++. +..+.....+..++|+|++++++++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE
Confidence 64321111 11113345578999999999766555 688999999998887 7777777788899999999987766
Q ss_pred E-CCCeEEEEeCCCCce--EEEEecC----C--CccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCe
Q psy17610 313 S-TNKMIDYWETCDGSI--IRSLEGS----D--VAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGV 370 (515)
Q Consensus 313 ~-~~~~i~~~d~~~~~~--~~~~~~~----~--~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 370 (515)
. .++.|.+||+.+++. +..+... . ......++|+|+|++|++++ .++.|.+||+....
T Consensus 239 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 5 477899999999877 4444322 1 01224589999999886554 56799999997654
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=6.2e-26 Score=208.65 Aligned_cols=273 Identities=11% Similarity=0.154 Sum_probs=220.4
Q ss_pred cCCCcEEEEEEecCCCEEEEEec-------CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEE
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTV-------NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRI 150 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~i 150 (515)
.....+..++|+|+++++++++. ++.|.+||..+++....+. ....+..++|+|+++++++++. ++.|.+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--NDLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--ESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--cCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 44567889999999999988873 5789999999976555443 2345788999999997776665 799999
Q ss_pred EeCCCCceeEEEEecCe---------EEEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610 151 WSVRTLNELLRISVMNM---------ICACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ 219 (515)
Q Consensus 151 w~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 219 (515)
||..+++.+..+..+.. .+.+++|+|++++++++. .++.|.+||+.+++....+. .+...+..++|+|
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDS 194 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEET
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECC
Confidence 99999998888875432 268899999999888776 47889999999999888773 3555688999999
Q ss_pred CCCEEEEecCCCcEEEEEccCCceeeEEeec----cccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC
Q psy17610 220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLK----EHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP 294 (515)
Q Consensus 220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~ 294 (515)
+++++++++.++.|.+||..... ....+. ++...+..++|+|+++++++++. ++.|.+||..+++....+..+
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNK--ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTE--EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCEEEEEcCCCeEEEEECCCCe--EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 99999999999999999996443 333333 24556788999999998777665 489999999999988887766
Q ss_pred ccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610 295 SMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359 (515)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 359 (515)
.+ ..++|+|++++++++. .++.|.+||..+++.+..+... ..+.+++|+|+|++++++..++
T Consensus 273 ~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 273 ES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP--THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp SC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC--SEEEEEEECTTSCEEEEEEECC
T ss_pred CC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC--CCCCeEEEcCCCCEEEEEEccc
Confidence 54 5799999999776666 6899999999999998888765 5778999999999887776553
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=2.3e-26 Score=210.70 Aligned_cols=270 Identities=11% Similarity=0.113 Sum_probs=193.4
Q ss_pred EEecCCCcEEEEEEecCCCEEEEEecC-ceEEEEECC--CCcee-EEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEE
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVFVGTVN-CEIFLIDMN--SGFTL-TLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRI 150 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~i~iw~~~--~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~i 150 (515)
....|...+.+++|+|++++|++++.+ +.|.+|+++ ++... ......+ ..+..++|+|+++++++++. ++.|.+
T Consensus 32 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 32 QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 334577889999999999999998876 899999997 54322 2233323 37899999999998888776 788999
Q ss_pred EeCC---CCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCC-CceEE----EecCCCCCCeEEEEEcCCC
Q psy17610 151 WSVR---TLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQS-GKLKF----IIPNAHNRGVTALAITQDG 221 (515)
Q Consensus 151 w~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~-~~~~~----~~~~~~~~~v~~~~~~~~~ 221 (515)
||+. +.+.+..+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++... .........+..++|+|++
T Consensus 111 ~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 9994 33334444333 3478899999999888887 889999999987 65432 2223345578899999999
Q ss_pred CEEEEe-cCCCcEEEEEccCCceee--EEeec---cc---cCceEEEEEecCCCEEEEEe-CCCcEEEEEcc----cceE
Q psy17610 222 TRLLSG-GGEGQVRIWKLTRESQSL--QCVLK---EH---TSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLI----KSTR 287 (515)
Q Consensus 222 ~~l~~~-~~d~~i~iw~~~~~~~~~--~~~~~---~~---~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~----~~~~ 287 (515)
++++++ ..++.|.+|+++...... ..... .. ...+..++|+|++++++++. .++.|.+||+. ..+.
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 977654 478999999995422221 22221 11 23566899999999887554 78999999998 3445
Q ss_pred EEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEE--eCCCCce--EEEEecCCCccEEEEEEcCCC
Q psy17610 288 LIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYW--ETCDGSI--IRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~--d~~~~~~--~~~~~~~~~~~i~~~~~~~~~ 349 (515)
+..+.....+..++|+|+++++++++ .++.+.+| |..+++. +..+... ....+++|.|+.
T Consensus 270 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g--~~p~~i~~~~~~ 334 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG--QGPMWVVVNAHE 334 (343)
T ss_dssp EEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS--SSCCEEEEEEEC
T ss_pred eeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC--CCCeeEEEEccc
Confidence 55555555688999999999988888 57999999 5445543 3344432 345567776643
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=9.1e-26 Score=205.49 Aligned_cols=275 Identities=9% Similarity=0.038 Sum_probs=203.0
Q ss_pred EEeCCCCcEEEE-EecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCce-EEEecC
Q psy17610 130 LQFPVNFSSVFA-TCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKL-KFIIPN 206 (515)
Q Consensus 130 ~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~-~~~~~~ 206 (515)
..|.+++.++++ ...++.|.+||+++++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+ .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~ 80 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-Q 80 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-c
Confidence 346666666554 4558999999999999988888766677 9999999997776665 88999999999987 5555 4
Q ss_pred CCCCCeEEEEEcCCCCEEEEecCCC---cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCc-EEEEE
Q psy17610 207 AHNRGVTALAITQDGTRLLSGGGEG---QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGT-CVLWD 281 (515)
Q Consensus 207 ~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~iwd 281 (515)
.+..+..+++|+|++++++++..++ .|.+||+... .....+.. ......++|+|++++++++ ..++. +.+|+
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~--~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN--KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT--EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC--CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 4555555599999999999665553 8999999543 33444443 3456899999999866655 55588 99999
Q ss_pred cccceE-----EEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCce---EEEEecCCCccEEEEEEcCCCCEE
Q psy17610 282 LIKSTR-----LIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSI---IRSLEGSDVAAVNCVDFVDDGKYF 352 (515)
Q Consensus 282 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l 352 (515)
+..... ...+........++|+|++++++++. .++.|.+||+.+++. +..+... ..+..++|+|+|+++
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTV 235 (331)
T ss_dssp ECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEE
T ss_pred ECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEE
Confidence 865322 22333445689999999999776655 588999999999988 7777654 567889999999977
Q ss_pred EEEc-CCCeEEEEEccCCee--eeeccCC----CC---CeeEEEECCCCcEEEEEeC-CCcEEEEeCCCC
Q psy17610 353 LTGG-ADQIVKMWMYREGVP--CFVGIGH----AA---SITKIKISPDKKVIVSVSA-DGGIFLWTFPEL 411 (515)
Q Consensus 353 ~~~~-~dg~i~i~d~~~~~~--~~~~~~~----~~---~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~ 411 (515)
+++. .++.|.+||..+++. +..+..+ .. ....++|+||+++|++++. ++.|.+||+...
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 6655 477899999998876 3332222 22 2356899999998876655 569999998754
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=4.7e-25 Score=202.79 Aligned_cols=272 Identities=10% Similarity=0.070 Sum_probs=219.2
Q ss_pred CccCeEEEEeCCCCcEEEEEec-------CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEe
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCS-------KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFT 194 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~ 194 (515)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.... .+..++|+|++++++++ ..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456889999999999988884 4679999999999888887543 46789999999966655 4579999999
Q ss_pred cCCCceEEEecCCCCC--------CeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecC
Q psy17610 195 PQSGKLKFIIPNAHNR--------GVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD 264 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 264 (515)
..+++....+...+.. .+.+++|+|+++++++++ .++.|.+||.. +......+..+...+..++|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG--NIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT--TTEEEEEECCCCTTCCCCEEETT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC--CCceEEEecCCCCccceEEECCC
Confidence 9999988777433222 278899999999887765 47889999995 34445555545566888999999
Q ss_pred CCEEEEEeCCCcEEEEEcccceEEEEEEc-----CccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCc
Q psy17610 265 SKEAMSASTDGTCVLWDLIKSTRLIIMIL-----PSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVA 338 (515)
Q Consensus 265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~ 338 (515)
++++++++.++.+.+||+.+++....+.. ...+..++++|++++++++.. ++.|.+||..+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 99999999999999999999998887765 234778999999998877765 4899999999999988888654
Q ss_pred cEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610 339 AVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG 401 (515)
Q Consensus 339 ~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 401 (515)
...++|+|+|++++++. .++.|.+||..+++.+..+... ..+.+++|+|++++|+++..++
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 25689999999665554 6899999999999888777544 4679999999999887776654
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=1e-25 Score=205.80 Aligned_cols=272 Identities=12% Similarity=0.070 Sum_probs=210.9
Q ss_pred CEEEEEecCceEEEEECCCCceeEEeeccCcc-CeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-----
Q psy17610 94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS-AIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN----- 166 (515)
Q Consensus 94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~----- 166 (515)
++|++++.++.|.+||..+++.+..+..++.. .+..++|+|+++.+++++. ++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 47889999999999999997665554433322 4889999999988766655 7899999999998887776321
Q ss_pred eEEEEEEEeeCCCEEEEEe------------CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 167 MICACIVFTYDGKAILSGW------------NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 167 ~~v~~~~~~~~~~~l~~~~------------~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
..+..++|+|+|++++++. .++.|.+||+.+++....+.. ...+..++|+|++++++++ ++.|.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEE
Confidence 2466799999999998886 579999999999988777632 4567889999999988887 58899
Q ss_pred EEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEEeCCC------------------------cEEEEEcccceEE
Q psy17610 235 IWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSASTDG------------------------TCVLWDLIKSTRL 288 (515)
Q Consensus 235 iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~------------------------~i~iwd~~~~~~~ 288 (515)
+||+... .....+..+. .+ +.|+|+++.++..+..+ .|.+||+.+++..
T Consensus 158 ~~d~~~~--~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 158 VMDPEAG--TLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEETTTT--EEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEECCCC--cEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 9999643 3333333332 32 36788888766554332 4689999988765
Q ss_pred EE--EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 289 II--MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 289 ~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
.. ......+..++|+|++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|++++.++.|.+||+
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 21 1233467889999999999888 789999999999988888755 46789999999999999999999999999
Q ss_pred cCCeeeeeccCC
Q psy17610 367 REGVPCFVGIGH 378 (515)
Q Consensus 367 ~~~~~~~~~~~~ 378 (515)
.+++.+..+..+
T Consensus 309 ~~~~~~~~~~~~ 320 (337)
T 1pby_B 309 ETLEKKGQVDLP 320 (337)
T ss_dssp TTCCEEEEEECG
T ss_pred cCCcEEEEEEcC
Confidence 999887776544
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=1.4e-25 Score=204.97 Aligned_cols=244 Identities=10% Similarity=0.058 Sum_probs=194.4
Q ss_pred cEEEEEEecCCCEEEE-EecCceEEEEECCCCceeEEeeccC----ccCeEEEEeCCCCcEEEEEe------------cC
Q psy17610 83 GISSLQYNPVNNKVFV-GTVNCEIFLIDMNSGFTLTLVNTCH----TSAIYDLQFPVNFSSVFATC------------SK 145 (515)
Q Consensus 83 ~v~~~~~s~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~------------~d 145 (515)
.+..++|+|+++++++ +..++.|.+||+.+++.+..+..++ ...+.+++|+|+|++++++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4778999999987755 4557899999999876555443333 23678899999999998886 57
Q ss_pred CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEE
Q psy17610 146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRL 224 (515)
Q Consensus 146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 224 (515)
+.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+||+.+++....+...+ ..+ +.|+|++..+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEE
Confidence 9999999999888777764 3456788999999988887 6889999999999887764333 133 3789998876
Q ss_pred EEecCCC------------------------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610 225 LSGGGEG------------------------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW 280 (515)
Q Consensus 225 ~~~~~d~------------------------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 280 (515)
+..+..+ .|.+||+...... ...+..+...+..++|+|++++++++ ++.|.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF 265 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence 6554332 4688998755443 34455566778899999999999888 6899999
Q ss_pred EcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS 335 (515)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 335 (515)
|+.+++....+.....+.+++|+|+++++++++.++.|.+||+.+++.+..+..+
T Consensus 266 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 266 DLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp ETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred ECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999998888888788899999999999999988999999999999998888765
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=4.7e-26 Score=203.93 Aligned_cols=254 Identities=14% Similarity=0.109 Sum_probs=196.8
Q ss_pred ecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEecCCCCCCeEEEEEcCCC
Q psy17610 143 CSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIPNAHNRGVTALAITQDG 221 (515)
Q Consensus 143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 221 (515)
+.++.|++||+.+++.. .+..+...+.+++|+|++++|++++ ++.|.+||+.+ ++........+...+.+++|+|++
T Consensus 19 ~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 45889999999987755 5556788999999999999999886 78999999999 877765533334778999999999
Q ss_pred CEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCCcEEEEEc--ccceEEEEEEcCcc
Q psy17610 222 TRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTCVLWDL--IKSTRLIIMILPSM 296 (515)
Q Consensus 222 ~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~--~~~~~~~~~~~~~~ 296 (515)
++|++++ .++...+|.++..... ...+..+ ..+..++|+|+++.++ ++..++.+.+|++ .+++..........
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 9999988 4456666666433333 2233333 3488899999999887 6778899999985 34455444455567
Q ss_pred EEEEEEcCCCcEEEEEE-CCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----------CeEEE
Q psy17610 297 IMSAAYHPSEVQLITCS-TNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----------QIVKM 363 (515)
Q Consensus 297 ~~~~~~~~~~~~l~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i 363 (515)
+..++|+|+++.+++++ .++.+.+|++. .+.....+..+. ..+..++|+|+|++|++++.+ +.|.+
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 99999999999888776 48889999876 455566665554 788899999999999888765 56999
Q ss_pred EEccCCee--eeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610 364 WMYREGVP--CFVGIGHAASITKIKISPDKKVIVSVSADG 401 (515)
Q Consensus 364 ~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 401 (515)
||+.+++. +..+.+|...+..++|+|++++|++++.+.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99988755 444457888999999999999999887654
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1.5e-23 Score=192.08 Aligned_cols=276 Identities=11% Similarity=0.096 Sum_probs=189.5
Q ss_pred EEEEEe----cCceEEEEECC--CCceeEEeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeCCCCc--eeEEEE
Q psy17610 95 KVFVGT----VNCEIFLIDMN--SGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSVRTLN--ELLRIS 163 (515)
Q Consensus 95 ~l~~~~----~d~~i~iw~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~--~~~~~~ 163 (515)
.+++|+ .++.|.+|+++ ++.........+...+..++|+|||+ |++++. ++.|.+|++.+++ .+..+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 455553 23456666554 54433323334567788999999998 776665 5899999997665 344445
Q ss_pred ecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecC-CCce--EEEecCC--------CCCCeEEEEEcCCCCEEEEecCCC
Q psy17610 164 VMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQ-SGKL--KFIIPNA--------HNRGVTALAITQDGTRLLSGGGEG 231 (515)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~-~~~~--~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~ 231 (515)
.+...+..++|+|+|++|++++ .++.+.+|++. ++.. +..+... +...+.+++|+|+|+.+++...++
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 5667788999999999998887 67999999996 3332 2322111 123488999999999666777788
Q ss_pred cEEEEEcc-CCceeeEEeecc-ccCceEEEEEecCCCEEEEE-eCCCcEEEEEccc--ceEE--EEEEc-C------ccE
Q psy17610 232 QVRIWKLT-RESQSLQCVLKE-HTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIK--STRL--IIMIL-P------SMI 297 (515)
Q Consensus 232 ~i~iw~~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~--~~~~--~~~~~-~------~~~ 297 (515)
.|.+|++. ............ ....+..++|+|+|++++++ ..++.+.+|++.. ++.. ..... + ..+
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence 99999997 222222222222 22357789999999976664 5678999999874 4432 22221 1 348
Q ss_pred EEEEEcCCCcEEE-EEECCCeEEEEeCCCC---ceEEEEecCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEc--cCCe
Q psy17610 298 MSAAYHPSEVQLI-TCSTNKMIDYWETCDG---SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMY--REGV 370 (515)
Q Consensus 298 ~~~~~~~~~~~l~-~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~--~~~~ 370 (515)
..++|+|++++++ +...++.|.+|++... +.+..+..+. ..+..++|+|+|++|++++. ++.+.+|++ .+++
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG-DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS-SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC-CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 8899999999875 4556899999998732 4445555433 56789999999998888765 489999954 4555
Q ss_pred ee
Q psy17610 371 PC 372 (515)
Q Consensus 371 ~~ 372 (515)
..
T Consensus 322 l~ 323 (347)
T 3hfq_A 322 LS 323 (347)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=7e-25 Score=196.27 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=191.2
Q ss_pred EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc-cCceEEEEEe
Q psy17610 184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIK 262 (515)
Q Consensus 184 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~ 262 (515)
++.++.|++||+.+++..... .|...+.+++|+|++++|++++ ++.|.+||+... .........+ ...+.+++|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD-PSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC-CSCEECCCTTCCCBCSCCEEC
T ss_pred CCcceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC-CCceEeccccccccccceEEC
Confidence 456889999999998877544 5888999999999999999876 789999999640 2333344444 4678899999
Q ss_pred cCCCEEEEEe--CCCcEEEEE--cccceEEEEEEcCccEEEEEEcCCCcEEE-EEECCCeEEEEeC--CCCceEEEEecC
Q psy17610 263 SDSKEAMSAS--TDGTCVLWD--LIKSTRLIIMILPSMIMSAAYHPSEVQLI-TCSTNKMIDYWET--CDGSIIRSLEGS 335 (515)
Q Consensus 263 ~~~~~l~~~~--~d~~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~i~~~d~--~~~~~~~~~~~~ 335 (515)
|+++++++++ .++...+|. ..+++ ...+.....+..++|+|+++.++ ++..++.+.+|++ .+++ ...+..+
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~ 171 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHG 171 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccC
Confidence 9999999998 334555554 44444 34444555688899999999887 6778898888885 3333 3444443
Q ss_pred CCccEEEEEEcCCCCEEEEEc-CCCeEEEEEcc-CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----------Cc
Q psy17610 336 DVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYR-EGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----------GG 402 (515)
Q Consensus 336 ~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~ 402 (515)
. ..+.+++|+|++++|++++ .++.+++|++. .+.....+..|...+..++|+|++++|++++.+ +.
T Consensus 172 ~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 172 E-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp S-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred C-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 3 7889999999999887765 58899999986 556667777888899999999999999988776 56
Q ss_pred EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC
Q psy17610 403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK 463 (515)
Q Consensus 403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 463 (515)
|.+||+...+.. .......+...+..++|+|++++|++++.+.
T Consensus 251 l~~~d~~~~~~~------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 251 VQLMDMDGGNVE------------------TLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEETTSCSCE------------------EEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEecCCCCce------------------eeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999998754310 0111223456688899999999998887654
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=3.2e-23 Score=189.84 Aligned_cols=272 Identities=14% Similarity=0.117 Sum_probs=187.2
Q ss_pred CCeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCceeeEEeeccccCceEEEEE
Q psy17610 187 DGFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI 261 (515)
Q Consensus 187 dg~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~ 261 (515)
++.|.+|++ ++++........+...+..++|+|+|+ |++++. ++.|.+|++..........+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 455666655 456654422234556778899999999 555544 68999999965555555555667788899999
Q ss_pred ecCCCEEEEEe-CCCcEEEEEcc---cceEEEEEEcC----------ccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CC
Q psy17610 262 KSDSKEAMSAS-TDGTCVLWDLI---KSTRLIIMILP----------SMIMSAAYHPSEVQLITCSTNKMIDYWETC-DG 326 (515)
Q Consensus 262 ~~~~~~l~~~~-~d~~i~iwd~~---~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~ 326 (515)
+|+++++++++ .++.+.+|++. ..+.+..+... ..+..++|+|+++.+++...++.+.+|++. ++
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 99999988888 67899999996 22333333322 137889999999955555668899999998 45
Q ss_pred ceE--EEEecCCCccEEEEEEcCCCCEEEE-EcCCCeEEEEEccC--Cee--eeeccCCC------CCeeEEEECCCCcE
Q psy17610 327 SII--RSLEGSDVAAVNCVDFVDDGKYFLT-GGADQIVKMWMYRE--GVP--CFVGIGHA------ASITKIKISPDKKV 393 (515)
Q Consensus 327 ~~~--~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~------~~i~~~~~~~~~~~ 393 (515)
+.. ..+.......+..++|+|||+++++ ...++.+.+|++.. ++. ...+.... ..+..++|+|||++
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 433 2233333346788999999996655 56788999999874 432 22222222 45889999999998
Q ss_pred EE-EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC-CeEEEE--e
Q psy17610 394 IV-SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-KMIDYW--E 469 (515)
Q Consensus 394 l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~v~iw--d 469 (515)
|+ +...++.|.+|++..... .. .......+...+..++|+|||++|++++.+ +.|.+| |
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~-------~~----------~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGH-------LT----------LIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGC-------EE----------EEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEEECCCCc-------EE----------EeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 75 555689999999863210 00 000111123347789999999998888764 899999 5
Q ss_pred cCCCeee
Q psy17610 470 TCDGSII 476 (515)
Q Consensus 470 ~~~~~~~ 476 (515)
..+|++.
T Consensus 317 ~~tg~l~ 323 (347)
T 3hfq_A 317 LTSGKLS 323 (347)
T ss_dssp TTTCCEE
T ss_pred CCCCeEE
Confidence 5567654
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=224.36 Aligned_cols=318 Identities=8% Similarity=-0.024 Sum_probs=221.8
Q ss_pred EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCcc---CeEEEEeCCCCcEEEEEec---------CCcEEEEeC
Q psy17610 86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---AIYDLQFPVNFSSVFATCS---------KNDIRIWSV 153 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~ 153 (515)
.++|+|+|+++++ +.|+.|++||+.+++. ..++.+|.. .+.+++|||||++|++++. ++.|++||+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQS-YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCE-EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcE-EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 6799999965554 5699999999999754 444444443 4899999999999998876 689999999
Q ss_pred CCCcee--EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-----------------EE
Q psy17610 154 RTLNEL--LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-----------------TA 214 (515)
Q Consensus 154 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-----------------~~ 214 (515)
.+++.+ ..+ ...+..++|+|||+.|+.+. ++.|++|++.+++.......++...+ .+
T Consensus 98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 988762 222 24578899999999999885 78999999999887654433443323 48
Q ss_pred EEEcCCCCEEEEecCCC----------------------------------cEEEEEccCCcee---eE---EeeccccC
Q psy17610 215 LAITQDGTRLLSGGGEG----------------------------------QVRIWKLTRESQS---LQ---CVLKEHTS 254 (515)
Q Consensus 215 ~~~~~~~~~l~~~~~d~----------------------------------~i~iw~~~~~~~~---~~---~~~~~~~~ 254 (515)
++|+|||++|++++.|. .|++||+...... .+ ..+.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999887552 7889998643321 11 12345778
Q ss_pred ceEEEEEecCCCEEEEEeCC----CcEEEEE----cccceEEEEE-----EcCccEE-----EEEEcCCCcEEEE--EEC
Q psy17610 255 SVSVIQIKSDSKEAMSASTD----GTCVLWD----LIKSTRLIIM-----ILPSMIM-----SAAYHPSEVQLIT--CST 314 (515)
Q Consensus 255 ~v~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~l~~--~~~ 314 (515)
.+..++|+||++.+++.... ..|.+|| +.+++..... .+...+. .+.|+|+++.++. ...
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 89999999998766664432 2488899 7776654333 1223344 7899999996654 334
Q ss_pred CC--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccC--Ce-eeeecc----CCCC
Q psy17610 315 NK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYRE--GV-PCFVGI----GHAA 380 (515)
Q Consensus 315 ~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~--~~-~~~~~~----~~~~ 380 (515)
++ .|.+||+.+++ ...+..+. ..+..+.++ +++.++..+.+ +..++|.+.. +. ....+. +|..
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~-~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~ 410 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGK-WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERC 410 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSS-SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTB
T ss_pred CCceEEEEEECCCCc-eEecccCc-eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCC
Confidence 44 67888887776 34444333 456677666 77776665554 7888888754 32 122222 3667
Q ss_pred CeeEEEECCCCcEEEEE-eCC--CcEEEEeCCCCc
Q psy17610 381 SITKIKISPDKKVIVSV-SAD--GGIFLWTFPELE 412 (515)
Q Consensus 381 ~i~~~~~~~~~~~l~~~-~~d--g~i~iw~~~~~~ 412 (515)
.+..+.|+|++++++.. +.. ..+.+||+.+.+
T Consensus 411 ~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 411 QYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp CBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred ceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 78899999998877754 333 468889886543
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=4.9e-24 Score=195.61 Aligned_cols=277 Identities=9% Similarity=-0.010 Sum_probs=196.7
Q ss_pred EEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEE-EeCCCeEEEEecCCCceEEEecC
Q psy17610 129 DLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILS-GWNDGFIRCFTPQSGKLKFIIPN 206 (515)
Q Consensus 129 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~-~~~dg~i~~~~~~~~~~~~~~~~ 206 (515)
.+++++++..+++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++++++ ...++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45788888888888899999999999998888877544 14678999999987654 45689999999999988777643
Q ss_pred CC-----CCCeEEEEEcCCCCEEEEecCC------------CcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEE
Q psy17610 207 AH-----NRGVTALAITQDGTRLLSGGGE------------GQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEA 268 (515)
Q Consensus 207 ~~-----~~~v~~~~~~~~~~~l~~~~~d------------~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l 268 (515)
.+ ...+..++|+|+|+++++++.+ +.|.+||+.+... ....... +...+.+++|+|+++ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 33 2347889999999999988865 8999999964321 2222222 334688899999999 6
Q ss_pred EEEeCCCcEEEEEcccceEEEEEEcCc-------------------------cEEEEEEcCCCcEEEEEE-CCCeEEEEe
Q psy17610 269 MSASTDGTCVLWDLIKSTRLIIMILPS-------------------------MIMSAAYHPSEVQLITCS-TNKMIDYWE 322 (515)
Q Consensus 269 ~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~~~-~~~~i~~~d 322 (515)
++++. .|.+||+.+++....+.... ....+++++++....... ....+..++
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 66543 49999999988877665442 334456665442111000 011122245
Q ss_pred CCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610 323 TCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG 401 (515)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 401 (515)
..+++....-.......+..++++| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSS
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCC
Confidence 5554432111111225778999999 99999988 88999999999988776653 34578999999999999888899
Q ss_pred cEEEEeCCCCc
Q psy17610 402 GIFLWTFPELE 412 (515)
Q Consensus 402 ~i~iw~~~~~~ 412 (515)
.|.+||+.+.+
T Consensus 317 ~v~v~d~~~~~ 327 (349)
T 1jmx_B 317 DLAVFNPDTLE 327 (349)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEeccccc
Confidence 99999987653
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.93 E-value=5.8e-24 Score=214.25 Aligned_cols=369 Identities=12% Similarity=0.068 Sum_probs=238.8
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccC-----eEEEEeCCCCcEEEEEecC---------Cc
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSA-----IYDLQFPVNFSSVFATCSK---------ND 147 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---------~~ 147 (515)
....+++|+|||++++++ |+.|++||+.+++.. .++.+|... ...++|||||++|+.++.+ +.
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 345588999999988886 899999999997654 445556533 2447889999999998875 55
Q ss_pred EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe---------------
Q psy17610 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV--------------- 212 (515)
Q Consensus 148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v--------------- 212 (515)
+.+||+.+++.. .+..+...+...+|||||+.|+.+. ++.|++|++.+++.......++...+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 679999988754 3555666789999999999999884 68999999998886654433443323
Q ss_pred --EEEEEcCCCCEEEEecCCC-cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc---c-
Q psy17610 213 --TALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK---S- 285 (515)
Q Consensus 213 --~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~- 285 (515)
..+.|+|||+.|+.++.|. .+.+|++...... ..+...+..+.+.+.|.. ....+|.+||+.+ +
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~-----~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~ 242 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE-----SLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVT 242 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST-----TCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSS
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCC-----CCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCC
Confidence 3589999999999887554 4888876321111 024445666777666643 1223689999988 7
Q ss_pred --eEEEEEE------cCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCc----e--EEEE-ecCCCccE-----E
Q psy17610 286 --TRLIIMI------LPSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGS----I--IRSL-EGSDVAAV-----N 341 (515)
Q Consensus 286 --~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~----~--~~~~-~~~~~~~i-----~ 341 (515)
+...... ....+..++|+||++.++.... +..|.+||+.+++ + +..+ ...+...+ .
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~ 322 (740)
T 4a5s_A 243 NATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPS 322 (740)
T ss_dssp CCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCC
T ss_pred cceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCC
Confidence 3333222 3345889999999997766543 2379999998887 1 1111 11121333 3
Q ss_pred EEEEcCCCCEEE-EEcC-C--CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy17610 342 CVDFVDDGKYFL-TGGA-D--QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----GGIFLWTFPELE 412 (515)
Q Consensus 342 ~~~~~~~~~~l~-~~~~-d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~ 412 (515)
...|+|||+.++ ..+. + ..|++||..+++... +......+..+.. +|++.|+..+.. +...||.+....
T Consensus 323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 678999999877 5543 3 368888987765543 3344555665542 345555544332 445666543221
Q ss_pred CccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC---CeEEEEecCCCeeeeeec
Q psy17610 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLE 480 (515)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~ 480 (515)
.... ..... .............|||++++++..... ..+.+++..+++.+..+.
T Consensus 401 ~~~~------~~lt~--------~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 401 YTKV------TCLSC--------ELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp EEEE------EESST--------TTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred CCcc------eeecc--------ccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 0000 00000 000112447788999999987755433 468888988777655543
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=1.1e-23 Score=193.27 Aligned_cols=274 Identities=12% Similarity=0.094 Sum_probs=197.7
Q ss_pred EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCCCCceeEEEEe
Q psy17610 86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~ 164 (515)
.+++++++.++++++.++.|.+||..+++.+..+..+....+..++|+|+++.+++++ .++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 4578888999999999999999999997555444332323578999999998776655 588999999999988877763
Q ss_pred cC------eEEEEEEEeeCCCEEEEEeCC------------CeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCE
Q psy17610 165 MN------MICACIVFTYDGKAILSGWND------------GFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTR 223 (515)
Q Consensus 165 ~~------~~v~~~~~~~~~~~l~~~~~d------------g~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~ 223 (515)
.. ..+..++|+|+|+++++++.+ +.|.+||+.+++. .... .+...+.+++|+|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCcccceeECCCCc-
Confidence 32 236789999999999998865 8999999988543 2233 2334688999999999
Q ss_pred EEEecCCCcEEEEEccCCceeeEEeecccc--C----------------------ceEEEEEecCCCE-----------E
Q psy17610 224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHT--S----------------------SVSVIQIKSDSKE-----------A 268 (515)
Q Consensus 224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~----------------------~v~~~~~~~~~~~-----------l 268 (515)
+++++. .|.+||+.+.. ....+..+. . ....+++++++.. +
T Consensus 161 l~~~~~--~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGK--YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp EEEESS--SEEEECTTTCC--EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCc--eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 555544 49999985433 333333221 0 2334555544321 1
Q ss_pred EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610 269 MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347 (515)
Q Consensus 269 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (515)
.....++.+.+|++. .....+..++++| ++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|
T Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~ 304 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFA--------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD--HTYYCVAFDK 304 (349)
T ss_dssp EEETTTCCEEEEEEE--------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECS
T ss_pred EEeccCCcEEecccc--------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC--CCccceEECC
Confidence 122233445555442 1345688999999 99999888 889999999999988888754 4567899999
Q ss_pred CCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGH 378 (515)
Q Consensus 348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 378 (515)
+|++|++++.++.|.+||..+++.+..+...
T Consensus 305 dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 305 KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 9998888888999999999998887776443
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=5.4e-23 Score=189.43 Aligned_cols=296 Identities=15% Similarity=0.187 Sum_probs=199.8
Q ss_pred CCEEEEEe----CCCeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCce--ee
Q psy17610 178 GKAILSGW----NDGFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQ--SL 245 (515)
Q Consensus 178 ~~~l~~~~----~dg~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~--~~ 245 (515)
..++++|+ .++.|.+|.+ ++++....... +...+..++|+|+|++|++++.+ +.|.+|+++..+. ..
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 34555664 3567888866 55665443323 66778889999999999988875 7999999875322 33
Q ss_pred EEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEE----EEEc-----------CccEEEEEEcCCCcEE
Q psy17610 246 QCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLI----IMIL-----------PSMIMSAAYHPSEVQL 309 (515)
Q Consensus 246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~----~~~~-----------~~~~~~~~~~~~~~~l 309 (515)
......+......+++ +++++++++ .++.+.+|++.....+. .... ...+.+++|+|+++++
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 3344445556677777 788777776 57899999987533221 1111 1135789999999977
Q ss_pred EEEEC-CCeEEEEeCCCCce------E------EEEecCCCccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCee--ee
Q psy17610 310 ITCST-NKMIDYWETCDGSI------I------RSLEGSDVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVP--CF 373 (515)
Q Consensus 310 ~~~~~-~~~i~~~d~~~~~~------~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~ 373 (515)
+++.. ++.+.+|++..... + ..........+..++|+|+|+++++++ .++.|.+|++.+++. +.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 76654 78999998775431 1 233333336678999999999887776 689999999987644 22
Q ss_pred e---ccCCCCCeeEEEECCCCcEEEEEeCC--CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEee
Q psy17610 374 V---GIGHAASITKIKISPDKKVIVSVSAD--GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAA 448 (515)
Q Consensus 374 ~---~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 448 (515)
. ...+......++|+||+++|+++..+ +.|.+|++......... ...... ...+..++
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~----------------~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK----------------VGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE----------------EEEEEC-SSCCCEEE
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE----------------eeEecC-CCCCceEE
Confidence 2 23344557899999999998776654 89999998632110000 000001 23467899
Q ss_pred eccCCcEEEEee-cCCeEEEE--ecCCCeeeeeecccccceEEEEEEc
Q psy17610 449 YHPSEVQLITCS-TNKMIDYW--ETCDGSIIRSLEGSDVAAVNCVDFV 493 (515)
Q Consensus 449 ~s~~~~~l~~~~-~dg~v~iw--d~~~~~~~~~~~~~~~~~v~~~~~s 493 (515)
|+|+|++|++++ .++.|.+| |..++++.......+...+.|+.|.
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999999998887 67889996 5557776655433333678898886
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=6.8e-23 Score=188.75 Aligned_cols=294 Identities=14% Similarity=0.134 Sum_probs=199.9
Q ss_pred ecCCCEEEEEec----CceEEEEEC--CCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC----CcEEEEeCCC--Cc
Q psy17610 90 NPVNNKVFVGTV----NCEIFLIDM--NSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK----NDIRIWSVRT--LN 157 (515)
Q Consensus 90 s~~~~~l~~~~~----d~~i~iw~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~--~~ 157 (515)
.+...++++|+. ++.|.+|++ +++........ +......++|+||+++|++++.+ +.|.+|+++. ++
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT 88 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc
Confidence 344456666643 467888876 44433333222 67778889999999999999885 7999999875 33
Q ss_pred e--eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEe----c---------CCCCCCeEEEEEcCCC
Q psy17610 158 E--LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFII----P---------NAHNRGVTALAITQDG 221 (515)
Q Consensus 158 ~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~----~---------~~~~~~v~~~~~~~~~ 221 (515)
. +.....+......+++ ++++|++++ .++.+.+|++.....+... . ..+...+.+++|+|+|
T Consensus 89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2 2233334445566776 888777776 5789999999754322111 0 1123346889999999
Q ss_pred CEEEEec-CCCcEEEEEccCCce----e-e------EEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEE
Q psy17610 222 TRLLSGG-GEGQVRIWKLTRESQ----S-L------QCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRL 288 (515)
Q Consensus 222 ~~l~~~~-~d~~i~iw~~~~~~~----~-~------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~ 288 (515)
+++++++ .++.|.+|++..... . + ......+......++|+|+++++++++ .++.|.+|++.+++..
T Consensus 167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 9766554 578999999875442 1 1 112223445678899999999888777 5899999999876543
Q ss_pred E--EEEcC----ccEEEEEEcCCCcEEEEEECC--CeEEEEeCC--CCc--eEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610 289 I--IMILP----SMIMSAAYHPSEVQLITCSTN--KMIDYWETC--DGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 289 ~--~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~--~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 356 (515)
. .+... .....++|+|++++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEE
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEE
Confidence 2 22221 236799999999999777665 899999985 444 3444444 25678999999999888877
Q ss_pred -CCCeEEEEEc--cCCeeeeec-cCCCCCeeEEEEC
Q psy17610 357 -ADQIVKMWMY--REGVPCFVG-IGHAASITKIKIS 388 (515)
Q Consensus 357 -~dg~i~i~d~--~~~~~~~~~-~~~~~~i~~~~~~ 388 (515)
.++.|.+|++ .+++..... ..+...+.|+.|.
T Consensus 325 ~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 325 RDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 6789999654 466655443 2244568888875
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=219.68 Aligned_cols=333 Identities=8% Similarity=0.001 Sum_probs=224.7
Q ss_pred EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEeC---------CCeEEEEec
Q psy17610 128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGWN---------DGFIRCFTP 195 (515)
Q Consensus 128 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~ 195 (515)
.+++|+|+| .+++.+.|++|++||+.+++....+..+.. .+.+++|+|||++|++++. ++.|++||+
T Consensus 19 ~~~~~s~dg-~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQ-EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSS-EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCC-eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 378999999 456666799999999999987766655433 3789999999999998876 689999999
Q ss_pred CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce-----------------EE
Q psy17610 196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV-----------------SV 258 (515)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v-----------------~~ 258 (515)
.+++..... .....+..++|+|||+.|+.+. ++.|++|++.......+ ...++...+ ..
T Consensus 98 ~~g~~~~~~--~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 98 SNGEFVRGN--ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTTEECCSS--CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCCccccce--ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCccc
Confidence 998763111 1125688999999999999885 68999999964432211 112222222 48
Q ss_pred EEEecCCCEEEEEeCCC----------------------------------cEEEEEcccceEE--EEE-------EcCc
Q psy17610 259 IQIKSDSKEAMSASTDG----------------------------------TCVLWDLIKSTRL--IIM-------ILPS 295 (515)
Q Consensus 259 ~~~~~~~~~l~~~~~d~----------------------------------~i~iwd~~~~~~~--~~~-------~~~~ 295 (515)
++|+|||++|++++.|. .|++||+.+++.. ..+ .+..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999987652 7889999887642 111 1234
Q ss_pred cEEEEEEcCCCcEEEEEECC----CeEEEEe----CCCCceEEEEe---cCCCccEE-----EEEEcCCCCEEEE--EcC
Q psy17610 296 MIMSAAYHPSEVQLITCSTN----KMIDYWE----TCDGSIIRSLE---GSDVAAVN-----CVDFVDDGKYFLT--GGA 357 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~----~~i~~~d----~~~~~~~~~~~---~~~~~~i~-----~~~~~~~~~~l~~--~~~ 357 (515)
.+..++|+||++.+++.... ..|.+|| ..+++....+. ..+...+. .+.|+|||+.++. ...
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 68899999998776664432 3488899 77776544332 22224454 7899999996554 445
Q ss_pred CC--eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----CcEEEEeCCCCcCccCCCcccceeeecccc
Q psy17610 358 DQ--IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----GGIFLWTFPELEDDVGDSRSLSSKISRSTA 430 (515)
Q Consensus 358 dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 430 (515)
+| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+ +..++|.+........ ...+ .
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~l----~---- 402 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS-KKCV----T---- 402 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC-EEES----S----
T ss_pred CCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC-ceec----c----
Confidence 55 57777876665 44555666678887777 77777766655 7889998754210000 0000 0
Q ss_pred cccceeeecCcccEEEeeeccCCcEEEEee-cC--CeEEEEecCCCeeeeeec
Q psy17610 431 RSTRLIIMILPSMIMSAAYHPSEVQLITCS-TN--KMIDYWETCDGSIIRSLE 480 (515)
Q Consensus 431 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d--g~v~iwd~~~~~~~~~~~ 480 (515)
..+..+...+..+.|+|++++++... .. ..+++||+.+++.+..+.
T Consensus 403 ----~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 403 ----CHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp ----TTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred ----CccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 00011234467889999998877543 22 468899998887654443
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=3.9e-24 Score=210.03 Aligned_cols=271 Identities=9% Similarity=0.010 Sum_probs=203.8
Q ss_pred CeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccC-
Q psy17610 166 NMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTR- 240 (515)
Q Consensus 166 ~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~- 240 (515)
..+|.+++|+|||++|++++. +|.+.+|++++++..... ..+...+..++|+|+ +.+++++. +....+|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 346899999999999998887 999999999776655433 334368999999999 67776654 45667776643
Q ss_pred -CceeeEEeeccccCceEEEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---
Q psy17610 241 -ESQSLQCVLKEHTSSVSVIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN--- 315 (515)
Q Consensus 241 -~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 315 (515)
..... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||+.++.++.+
T Consensus 99 ~~g~~~--~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ--RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE--ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc--cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCC
Confidence 22222 22222 23446688888864 3344445566699999988776666555 789999999999988776
Q ss_pred -CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC--eEEEEEccCCeeeeeccCCCCCeeEEE------
Q psy17610 316 -KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ--IVKMWMYREGVPCFVGIGHAASITKIK------ 386 (515)
Q Consensus 316 -~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~------ 386 (515)
..|++||+.+++.. .+..+. ..+..++|+|||+.|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCce-EeecCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence 78999999888765 454444 7789999999999999888888 8999999988877 7778887777777
Q ss_pred --ECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCe
Q psy17610 387 --ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM 464 (515)
Q Consensus 387 --~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 464 (515)
|+|||.++++++.++.+++|++ ++... .....+..++|+ +++++++++.+..
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-----------------------~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFID--GERVE-----------------------APQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEET--TEEEC-----------------------CCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEE--CCeec-----------------------cCCCceEEEEec-CCEEEEEEcCCCC
Confidence 9999999999999999999998 21100 011347789999 9999998887744
Q ss_pred ---EEEEecCC
Q psy17610 465 ---IDYWETCD 472 (515)
Q Consensus 465 ---v~iwd~~~ 472 (515)
+++||..+
T Consensus 305 p~~l~~~d~~~ 315 (582)
T 3o4h_A 305 PPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEETTCC
T ss_pred CCeEEEEcCCC
Confidence 77777654
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=6.8e-24 Score=208.31 Aligned_cols=270 Identities=11% Similarity=0.060 Sum_probs=198.7
Q ss_pred CccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeC---CCeEEEEecCC
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWN---DGFIRCFTPQS 197 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~ 197 (515)
+..+|.+++|+|||+.|++++. |++++||++++++ ..++..+. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 4568999999999999999887 9999999996554 45555555 58899999999 77776664 44455554432
Q ss_pred ---CceEEEecCCCCCCeEEEEEcCCCCE-EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610 198 ---GKLKFIIPNAHNRGVTALAITQDGTR-LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST 273 (515)
Q Consensus 198 ---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 273 (515)
+... .+. ....+...+|+|+++. +++.+.++.+.+||+.+..... ... +.. .+++|+|||+++++++.
T Consensus 98 ~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~--l~~-~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 98 SRPGEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE--LAR-LPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp TSTTCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE--EEE-ESS--CEEEEEEETTEEEEEEE
T ss_pred cCCCccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE--eec-CCC--ceEEECCCCCEEEEEEE
Confidence 2323 332 2223446688887753 3333344556699996543222 222 222 78999999999998887
Q ss_pred C----CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC--eEEEEeCCCCceEEEEecCCCccEEEEE---
Q psy17610 274 D----GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK--MIDYWETCDGSIIRSLEGSDVAAVNCVD--- 344 (515)
Q Consensus 274 d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~--- 344 (515)
+ +.|++||+.+++..........+..++|+|||+.|+++..++ .|++||+.+++.. .+..+. ..+..++
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~-~~~~~~~~~~ 247 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS-KDFSSYRPTA 247 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC-SHHHHHCCSE
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC-cChhhhhhcc
Confidence 7 789999998888765555666789999999999999888888 8999999998877 444433 4555566
Q ss_pred -----EcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc---EEEEeCCC
Q psy17610 345 -----FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGG---IFLWTFPE 410 (515)
Q Consensus 345 -----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~iw~~~~ 410 (515)
|+|||.++++++.++.+++|++ ++... .+...+.+++|+ +++++++++.+.. +.+|+...
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999999999999999999999 66554 344678999999 9999998887744 66776543
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.1e-22 Score=204.95 Aligned_cols=345 Identities=10% Similarity=0.043 Sum_probs=221.4
Q ss_pred cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeE-----EEEEEEeeCCCEEEEEeCC---------CeE
Q psy17610 125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMI-----CACIVFTYDGKAILSGWND---------GFI 190 (515)
Q Consensus 125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------g~i 190 (515)
....+++|+||++++++. |++|++||+.+++....+..+... ...+.|||||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999777765 999999999999987777665432 2347899999999998875 567
Q ss_pred EEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce--------------
Q psy17610 191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV-------------- 256 (515)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v-------------- 256 (515)
.+||+.+++... + ..|...+...+|+|||+.|+.+. ++.|++|++....... .+..++...+
T Consensus 95 ~~~d~~~~~~~~-l-~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKRQLIT-E-ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTTEECC-S-SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCCcEEE-c-ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhc
Confidence 799999998653 3 46778899999999999999884 6899999986443221 1222332222
Q ss_pred ---EEEEEecCCCEEEEEeCCCc-EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC---Cc--
Q psy17610 257 ---SVIQIKSDSKEAMSASTDGT-CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD---GS-- 327 (515)
Q Consensus 257 ---~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~---~~-- 327 (515)
..+.|+|||+.|+.++.|.+ +.+|++....... ........+.+.+.|.. .....|++||+.+ ++
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~--~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES--LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNA 244 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT--CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC--CCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcc
Confidence 35899999999998876544 8888763211000 11223455566555532 1223689999998 73
Q ss_pred eEEEEec-----CCCccEEEEEEcCCCCEEEEEcC----CCeEEEEEccCCe----ee--eec--cCCCCCee-----EE
Q psy17610 328 IIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGA----DQIVKMWMYREGV----PC--FVG--IGHAASIT-----KI 385 (515)
Q Consensus 328 ~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~i~-----~~ 385 (515)
....+.. .+...+..++|+|||+.++.... +..|.+||+.+++ +. ..+ ..|...+. ..
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p 324 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP 324 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCc
Confidence 2334433 13367899999999997665432 3479999998886 22 112 34555554 78
Q ss_pred EECCCCcEEE-EEeC-CC--cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610 386 KISPDKKVIV-SVSA-DG--GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST 461 (515)
Q Consensus 386 ~~~~~~~~l~-~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 461 (515)
+|+|||+.|+ ..+. +| .|.+|++....... + ......+..+. .+|++.|+..+.
T Consensus 325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-----l----------------T~g~~~v~~~~-~~d~~~i~f~~~ 382 (740)
T 4a5s_A 325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-----I----------------TKGTWEVIGIE-ALTSDYLYYISN 382 (740)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-----S----------------CCSSSCEEEEE-EECSSEEEEEES
T ss_pred eEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-----c----------------ccCCEEEEEEE-EEeCCEEEEEEe
Confidence 9999999877 6653 44 47777776432110 0 00111233332 244655554433
Q ss_pred C-----C--eEEEEecCCCeeeeeeccc---ccceEEEEEEcCCCcEEEEee
Q psy17610 462 N-----K--MIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKYFLTGG 503 (515)
Q Consensus 462 d-----g--~v~iwd~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~ 503 (515)
. + .|+..++..++....+... .........|+|++++++...
T Consensus 383 ~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 383 EYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp CGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred cCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 2 3 4555555544433233311 125678899999999876543
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.91 E-value=7.3e-22 Score=180.58 Aligned_cols=289 Identities=13% Similarity=0.094 Sum_probs=214.3
Q ss_pred CCCEEEEEe------cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEeCCC
Q psy17610 92 VNNKVFVGT------VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWSVRT 155 (515)
Q Consensus 92 ~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~ 155 (515)
+++++++.. .|+.|.+||..+++.+.. +..+..+ .++|+||+++++++.. ++.|.+||..+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~-i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGM-VPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEE-EECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEE-ecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 556666653 367999999998765544 4445555 8999999999999873 56799999999
Q ss_pred CceeEEEEec------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEE-ecCCCCCCeEEEEEcCCC-CEEE
Q psy17610 156 LNELLRISVM------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFI-IPNAHNRGVTALAITQDG-TRLL 225 (515)
Q Consensus 156 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~ 225 (515)
++.+.++... ......++++|||++|+++.. ++.|.+||+.+++.+.. +. .. ....+.+.|++ ..++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~-~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AA-GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GT-TEEEEEECTTSSSEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CC-CcceeEEcCCCCeeEE
Confidence 9998888753 233467899999999998874 57899999999988877 53 22 22335667765 6778
Q ss_pred EecCCCcEEEEEccCCceeeE------EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE--EEEEEcC---
Q psy17610 226 SGGGEGQVRIWKLTRESQSLQ------CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR--LIIMILP--- 294 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~--- 294 (515)
+.+.||.+.+|+..... ... ..+.....++ .+.+++++..++..+.++.+.++|+..... ...+...
T Consensus 168 ~~~~dg~~~~v~~~~~g-~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDG-KVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EEETTSSEEEEEECTTS-SEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred EECCCCcEEEEEECCCC-cEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 88899999999985322 221 1112222222 234467788888888899999999865432 2222111
Q ss_pred --------ccEEEEEEcCCCcEEEEEEC-----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610 295 --------SMIMSAAYHPSEVQLITCST-----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 295 --------~~~~~~~~~~~~~~l~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
.....++++|+++.++++.. .+.|.+||+.+++.+.++..+. +..++|+|||++|+++
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEE
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEe
Confidence 11123789999888877653 3589999999999999998774 8899999999999988
Q ss_pred cCCCeEEEEEccCC--eeeeeccCCCCCeeEEEECCCCc
Q psy17610 356 GADQIVKMWMYREG--VPCFVGIGHAASITKIKISPDKK 392 (515)
Q Consensus 356 ~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 392 (515)
+. +.|.+||..++ +.+..+..+......++++|+|+
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 87 99999999999 99888777778889999999985
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=7.4e-22 Score=183.89 Aligned_cols=286 Identities=11% Similarity=0.064 Sum_probs=201.3
Q ss_pred EEEEEecCCCcEEE-----EEEecCCCEEEEEec-Cc--eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec
Q psy17610 73 TALYLLKDDSGISS-----LQYNPVNNKVFVGTV-NC--EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS 144 (515)
Q Consensus 73 ~~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 144 (515)
....+..|...... .+|||||++|+.++. ++ .|++||+.+++ ...+..++...+..++|+|||+.|+.++.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-ATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-EEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-eEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 34445556666665 899999999999887 66 49999999864 44555556666667889999999999999
Q ss_pred CCcEEEEeCCCCceeEEEEecCeEEEEEE--EeeCCCEEEEEe----------------------CCCeEEEEecCCCce
Q psy17610 145 KNDIRIWSVRTLNELLRISVMNMICACIV--FTYDGKAILSGW----------------------NDGFIRCFTPQSGKL 200 (515)
Q Consensus 145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~~~~~~~~~~ 200 (515)
++.+.+||+.+++....+..+...+.... ++|++++++... .+..|.+||+.+++.
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 99999999999988776666665554443 488999887432 346799999999876
Q ss_pred EEEecCCCCCCeEEEEEcC-CCCEEEEecCC------CcEEEEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEE
Q psy17610 201 KFIIPNAHNRGVTALAITQ-DGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSA 271 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~ 271 (515)
.... .+...+..+.|+| +|+.|+....+ ..|.++|..... .. .+..+. ..+....|+|||+.|+..
T Consensus 181 ~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~-~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 181 TVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MR-KVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp EEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CE-ESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred EEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eE-EeeeCCCCcccccceECCCCCEEEEE
Confidence 5544 4566789999999 99988876653 367777764322 22 223333 357788999999988665
Q ss_pred eCC-C----cEEEEEcccceEEEEEEcCcc------EEEEEEcCCCcEEEEE---------ECCCeEEEEeCCCCceEEE
Q psy17610 272 STD-G----TCVLWDLIKSTRLIIMILPSM------IMSAAYHPSEVQLITC---------STNKMIDYWETCDGSIIRS 331 (515)
Q Consensus 272 ~~d-~----~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~---------~~~~~i~~~d~~~~~~~~~ 331 (515)
+.+ + .|.+||+.+++.......+.. .....|+|+++.++.. ..+..|++||+.+++.. .
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~ 334 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-R 334 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-E
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-E
Confidence 432 2 399999998876544333321 1113689999888754 44668999999887653 4
Q ss_pred EecCCCc-----------cEEEEEEcCCCCEEEEEc-CCCeEEEEEc
Q psy17610 332 LEGSDVA-----------AVNCVDFVDDGKYFLTGG-ADQIVKMWMY 366 (515)
Q Consensus 332 ~~~~~~~-----------~i~~~~~~~~~~~l~~~~-~dg~i~i~d~ 366 (515)
+..+. . .+..++|+|||+.|+..+ .+|...+|.+
T Consensus 335 l~~~~-~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 335 VARHD-TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEECC-CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ecccc-CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 44332 2 467889999999887665 4666666644
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=1.1e-21 Score=182.67 Aligned_cols=300 Identities=14% Similarity=0.070 Sum_probs=203.9
Q ss_pred EEEecCCCceEEEecCCCCCCeEE-----EEEcCCCCEEEEecC-CCc--EEEEEccCCceeeEEeeccccCceEEEEEe
Q psy17610 191 RCFTPQSGKLKFIIPNAHNRGVTA-----LAITQDGTRLLSGGG-EGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIK 262 (515)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~ 262 (515)
..++..++.....+ ..|...... .+|+|||++|+.++. ++. |.+||+. .........++...+..+.|+
T Consensus 13 ~~~~~~~g~~~~~l-t~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~--~g~~~~lt~~~~~~~~~~~~s 89 (388)
T 3pe7_A 13 TYQDASTGAQVTRL-TPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN--TQVATQLTEGRGDNTFGGFLS 89 (388)
T ss_dssp EEECTTTCCEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT--TCEEEECCCSSCBCSSSCEEC
T ss_pred EEecCCCCcceEEe-cCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC--CCceEEeeeCCCCCccceEEc
Confidence 34577777777666 456655555 789999999998877 664 7777774 444455555565555567899
Q ss_pred cCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc-EEE--EEEcCCCcEEEEEE----------------------CCCe
Q psy17610 263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM-IMS--AAYHPSEVQLITCS----------------------TNKM 317 (515)
Q Consensus 263 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~----------------------~~~~ 317 (515)
||++.|+.++.++.+++||+.+++.......+.. +.. ..++|+++.++... .+..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 9999999999999999999999988777666554 322 34589999887532 3468
Q ss_pred EEEEeCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCC------CeEEEEEccCCeeeeeccCCC--CCeeEEEEC
Q psy17610 318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGAD------QIVKMWMYREGVPCFVGIGHA--ASITKIKIS 388 (515)
Q Consensus 318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~ 388 (515)
|.+||+.+++........ ..+..+.|+| ||+.|+....+ ..|.++|...++. ..+..+. ..+..++|+
T Consensus 170 l~~~d~~~g~~~~l~~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQEN--QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEETTTCCEEEEEEES--SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEEC
T ss_pred EEEEECCCCceEEeecCC--ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceEC
Confidence 999999998765444332 5688999999 99988877653 3788888766544 3333443 357889999
Q ss_pred CCCcEEEEEeC-CC----cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEe----
Q psy17610 389 PDKKVIVSVSA-DG----GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC---- 459 (515)
Q Consensus 389 ~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---- 459 (515)
|||+.|+..+. ++ .|.+||+...+.... .. .. .... .. .......|+|||+.|+..
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-----~~-~~-----~~~~-~~---~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 247 PDGSALVYVSYLKGSPDRFIYSADPETLENRQL-----TS-MP-----ACSH-LM---SNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE-----EE-EC-----CEEE-EE---ECTTSSEEEEEECCC-------
T ss_pred CCCCEEEEEecCCCCCcceEEEEecCCCceEEE-----Ec-CC-----Ccee-ee---ecCCCCeEccCCCcceeEeeec
Confidence 99997766543 22 399999876542100 00 00 0000 00 001123799999988854
Q ss_pred -----ecCCeEEEEecCCCeeeeeecccccc-----------eEEEEEEcCCCcEEEEee-cCCeEEEEEE
Q psy17610 460 -----STNKMIDYWETCDGSIIRSLEGSDVA-----------AVNCVDFVDDGKYFLTGG-ADQIVKICLY 513 (515)
Q Consensus 460 -----~~dg~v~iwd~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~~-~dg~v~iw~~ 513 (515)
..+..|++||+.+++.. .+..+. . .+.+++|+|||+.|+..+ .+|...||.+
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQH-RVARHD-TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp -----CCCCEEEEEETTTTEEE-EEEECC-CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cccccCCCCEEEEEeccCCceE-Eecccc-CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 44668999999887754 344333 3 477889999999888655 5788888865
No 164
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.3e-22 Score=188.30 Aligned_cols=163 Identities=14% Similarity=0.112 Sum_probs=133.0
Q ss_pred ecCCCcEEEEEEecCCCEEE----EEecCceEEEEECCCC-----ce-----eEEeeccCccCeEEEEeCCC-CcEEEEE
Q psy17610 78 LKDDSGISSLQYNPVNNKVF----VGTVNCEIFLIDMNSG-----FT-----LTLVNTCHTSAIYDLQFPVN-FSSVFAT 142 (515)
Q Consensus 78 ~~~~~~v~~~~~s~~~~~l~----~~~~d~~i~iw~~~~~-----~~-----~~~~~~~h~~~v~~~~~~~~-~~~l~~~ 142 (515)
..+.+.|.+++|+|++++|| +|+.|+.|++||+.++ .. ....+.+|...|.+++|+|+ +..|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 45788999999999999999 6788999999998753 11 13456779999999999998 7889999
Q ss_pred ecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEE
Q psy17610 143 CSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALA 216 (515)
Q Consensus 143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~ 216 (515)
+.|++|++||++++..+.....|...+.+++|+|+|++|++|+.||.|++||++ ++....+.. .|...+.+++
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 999999999999987777777788899999999999999999999999999998 555544421 1234799999
Q ss_pred EcCCCCEEEEe-cCCC------cEEEEEccCC
Q psy17610 217 ITQDGTRLLSG-GGEG------QVRIWKLTRE 241 (515)
Q Consensus 217 ~~~~~~~l~~~-~~d~------~i~iw~~~~~ 241 (515)
|++++.++++. ..+| .+++|++...
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99988776543 3333 3899999754
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=7e-21 Score=175.16 Aligned_cols=246 Identities=11% Similarity=0.014 Sum_probs=174.3
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECC-CCceeEEeeccCccCeEEEEeCCCCcE--EEEEe-------------
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN-SGFTLTLVNTCHTSAIYDLQFPVNFSS--VFATC------------- 143 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~~~~------------- 143 (515)
....+..++|+|+|++|++++.+ .|.+|++. +++..........+...+++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 34568899999999999998888 99999997 654332211101123567899999985 34443
Q ss_pred cCCcEEEEeCC-CCceeEEEEe----cCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecC-CCceEE--EecC-CCCCCeE
Q psy17610 144 SKNDIRIWSVR-TLNELLRISV----MNMICACIVFTYDGKAILSGWN-DGFIRCFTPQ-SGKLKF--IIPN-AHNRGVT 213 (515)
Q Consensus 144 ~d~~i~iw~~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~-~~~~~~--~~~~-~~~~~v~ 213 (515)
.++.+.+|++. +++....+.. +...+.+++|+|+|++++++.. ++.|.+|++. +++... .+.. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 58899999997 4665544442 4567899999999998887764 6799999998 776532 2311 2456789
Q ss_pred EEEEcCCCCEEEEecC-CCcEEEEEccCCceeeE------Eeec----cccC------ceEEEE-EecCCCEEEEEeCCC
Q psy17610 214 ALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQ------CVLK----EHTS------SVSVIQ-IKSDSKEAMSASTDG 275 (515)
Q Consensus 214 ~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~------~~~~----~~~~------~v~~~~-~~~~~~~l~~~~~d~ 275 (515)
.++|+|+|+++++++. ++.|.+|+++..+.... ..+. +|.. .+..++ |+|||++|+++..+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999887764 68999998753332221 1122 1222 478899 999999988766432
Q ss_pred ------cEEEEEcc-cceEEEE---EE-cCccEEEEEEcC---CCcEEEEEECC-CeEEEEeCCCC
Q psy17610 276 ------TCVLWDLI-KSTRLII---MI-LPSMIMSAAYHP---SEVQLITCSTN-KMIDYWETCDG 326 (515)
Q Consensus 276 ------~i~iwd~~-~~~~~~~---~~-~~~~~~~~~~~~---~~~~l~~~~~~-~~i~~~d~~~~ 326 (515)
.|.+|++. +++.... .. .......++++| ++++++++..+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 5554432 22 233466789999 89999998864 89999988665
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=2.8e-21 Score=177.89 Aligned_cols=281 Identities=8% Similarity=0.021 Sum_probs=185.4
Q ss_pred EEEEecCC--CcEEEEEccCCceee--EEeec-cccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEEEEEc--C
Q psy17610 223 RLLSGGGE--GQVRIWKLTRESQSL--QCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLIIMIL--P 294 (515)
Q Consensus 223 ~l~~~~~d--~~i~iw~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~--~ 294 (515)
.+++|+.. +.|.+|+++..+... ..... .....+..++|+|+++++++++.+ .|.+|++. +++....... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 34555543 468888765333332 22211 233467889999999999998888 99999997 6665443332 2
Q ss_pred ccEEEEEEcCCCcE--EEEEE-------------CCCeEEEEeCC-CCceEEEEec---CCCccEEEEEEcCCCCEEEEE
Q psy17610 295 SMIMSAAYHPSEVQ--LITCS-------------TNKMIDYWETC-DGSIIRSLEG---SDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 295 ~~~~~~~~~~~~~~--l~~~~-------------~~~~i~~~d~~-~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~ 355 (515)
.....++++|++++ ++++. .++.+.+|++. .++....+.. .....+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 33456889999995 44442 68899999997 4665544432 233678899999999988876
Q ss_pred cC-CCeEEEEEcc-CCeee--eecc--CCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610 356 GA-DQIVKMWMYR-EGVPC--FVGI--GHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRS 428 (515)
Q Consensus 356 ~~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 428 (515)
.. ++.|++|++. +++.. ..+. .|...+..++|+||+++|++++. ++.+.+|++.......... .......
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~---~~~~~~~ 239 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT---HHSFPLI 239 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE---EEEEESS
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc---cceEEcC
Confidence 53 6799999998 66543 2232 24567899999999999988775 6899999875321100000 0000000
Q ss_pred cccccceeeecCcc------cEEEee-eccCCcEEEEeecCC------eEEEEecC-CCeeeee---ecccccceEEEEE
Q psy17610 429 TARSTRLIIMILPS------MIMSAA-YHPSEVQLITCSTNK------MIDYWETC-DGSIIRS---LEGSDVAAVNCVD 491 (515)
Q Consensus 429 ~~~~~~~~~~~~~~------~i~~~~-~s~~~~~l~~~~~dg------~v~iwd~~-~~~~~~~---~~~~~~~~v~~~~ 491 (515)
. ....++.. .+..++ |+|||++|++++.+. .|.+|++. ++++... ...+. ..+..++
T Consensus 240 --~---~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~-~~~~~~a 313 (365)
T 1jof_A 240 --P---PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT-SGGHSNA 313 (365)
T ss_dssp --C---TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS-CCTTCCC
T ss_pred --C---CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC-CCcccce
Confidence 0 00001111 478899 999999988776432 89999996 6665432 22232 4566789
Q ss_pred EcC---CCcEEEEeecC-CeEEEEEE
Q psy17610 492 FVD---DGKYFLTGGAD-QIVKICLY 513 (515)
Q Consensus 492 ~s~---~~~~l~s~~~d-g~v~iw~~ 513 (515)
|+| ||++|++++.+ +.|++|++
T Consensus 314 ~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 314 VSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 999 89999998864 89999986
No 167
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.4e-21 Score=183.06 Aligned_cols=238 Identities=14% Similarity=0.079 Sum_probs=170.2
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCC----------ceeEE----eeccCccCeEEEEeCCCCcEEE----EE
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG----------FTLTL----VNTCHTSAIYDLQFPVNFSSVF----AT 142 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~----~~~~h~~~v~~~~~~~~~~~l~----~~ 142 (515)
...++.+++++++.++++++.++ +++|+...- ..... ....+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 45689999999999999999887 888875320 01110 1113567899999999999999 56
Q ss_pred ecCCcEEEEeCCCC--------ce---eEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecCCCCC
Q psy17610 143 CSKNDIRIWSVRTL--------NE---LLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNR 210 (515)
Q Consensus 143 ~~d~~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~ 210 (515)
+.|+.|+|||+.++ +. +..+.+|...|.+++|+|+ +++|++++.||.|++||++++...... .+|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-LPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-ECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-cCCCC
Confidence 67999999998765 22 3334468899999999998 789999999999999999998766554 47889
Q ss_pred CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc-------ccCceEEEEEecCCCEEEEE-eCCC------c
Q psy17610 211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE-------HTSSVSVIQIKSDSKEAMSA-STDG------T 276 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~-~~d~------~ 276 (515)
.|.+++|+|+|++|++|+.||.|++||.+ .. ....+.. |...|.+++|++++.++++. ..+| .
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 99999999999999999999999999986 22 2222222 33489999999988776543 3343 3
Q ss_pred EEEEEcccce-----EEEEEEcC--------ccEEEEEEcCCCcEEEEEEC-CCeEEEEeC
Q psy17610 277 CVLWDLIKST-----RLIIMILP--------SMIMSAAYHPSEVQLITCST-NKMIDYWET 323 (515)
Q Consensus 277 i~iwd~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~ 323 (515)
+++|++++.+ ....+... .+...+...++.+++++++. ...|.++..
T Consensus 271 v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 271 VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 8999997642 11111111 12223334466666666554 444666553
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=2.7e-22 Score=187.47 Aligned_cols=329 Identities=10% Similarity=0.008 Sum_probs=212.4
Q ss_pred EEEECCCCceeEEeeccCcc-----CeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEE-EEEEee
Q psy17610 106 FLIDMNSGFTLTLVNTCHTS-----AIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICA-CIVFTY 176 (515)
Q Consensus 106 ~iw~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~ 176 (515)
...|..++..+..+ ..+.. .+..++|+|||++|+.+... ..|.+||+.+++... +..+..... .+.|+|
T Consensus 13 ~~~d~~~g~~~~~l-~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~sp 90 (396)
T 3c5m_A 13 TFVDSDTQVKVTRL-TPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFIST 90 (396)
T ss_dssp EEECTTTCCEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECT
T ss_pred eeecCCCCcceEEE-ecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECC
Confidence 44577776554443 32332 37788999999998887653 468888998876543 333333322 378999
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce
Q psy17610 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV 256 (515)
Q Consensus 177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v 256 (515)
||++|+.++.++.|.+||+.+++..... ..+.. |+++|+.|+....+....+|..
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~-~~~~~------~~~~g~~l~~~~~~~~~~~~~~------------------ 145 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEEQVIY-TVDEE------WKGYGTWVANSDCTKLVGIEIL------------------ 145 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEE-ECCTT------EEEEEEEEECTTSSEEEEEEEE------------------
T ss_pred CCCEEEEEEcCCcEEEEECCCCCcEEEE-ecccc------cCCCCCEEEeccCCcccccccc------------------
Confidence 9999999999999999999988766554 22322 6777888887776655544431
Q ss_pred EEEEEecCCCEEEEE-----eCCCcEEEEEcccceEEEEEEcCccEEEEEEcC-CCcEEEEEECC------CeEEEEeCC
Q psy17610 257 SVIQIKSDSKEAMSA-----STDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP-SEVQLITCSTN------KMIDYWETC 324 (515)
Q Consensus 257 ~~~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~------~~i~~~d~~ 324 (515)
...++|+++.++.. ..+..|.+||+.+++..........+..+.|+| ++..++..+.+ ..|.+||+.
T Consensus 146 -~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 146 -KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp -GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred -ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 12366788776654 356689999999888777777777889999999 78877766543 368889987
Q ss_pred CCceEEEEecCC-CccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEE
Q psy17610 325 DGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSV 397 (515)
Q Consensus 325 ~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 397 (515)
.++... +..+. ...+..++|+|+|+.|+..+.+ +.|++||+.+++...... .. ... +.|+| |+++++++
T Consensus 225 ~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 225 GSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp SCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEE
T ss_pred CCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEe
Confidence 655332 22221 2467889999999987776543 459999998876543221 11 123 89999 99988876
Q ss_pred e----------------CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610 398 S----------------ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST 461 (515)
Q Consensus 398 ~----------------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 461 (515)
+ .+..|.+||+...... .+...... ...........+..+.|+|+|+.|+..+.
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-----~l~~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-----KLCKHSTS-----WDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTBCC-----EEEECCCC-----CCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCceE-----EccCCCCc-----cccccccccCCCCCceEccCCCeEEEEec
Confidence 4 2467999998764321 00000000 00000000012456789999998887764
Q ss_pred -CCe--EEEEecCCCeee
Q psy17610 462 -NKM--IDYWETCDGSII 476 (515)
Q Consensus 462 -dg~--v~iwd~~~~~~~ 476 (515)
++. |+.+++.+++..
T Consensus 371 ~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 371 FEGVPAIYIADVPESYKH 388 (396)
T ss_dssp TTSSCEEEEEECCTTCC-
T ss_pred CCCCceEEEEEEcccccc
Confidence 444 455555555443
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.89 E-value=3.2e-20 Score=169.69 Aligned_cols=259 Identities=11% Similarity=0.062 Sum_probs=188.3
Q ss_pred EEEEecCCCEEEEEec----------CceEEEEECCCCceeEEeecc-----CccCeEEEEeCCCCcEEEEEec--CCcE
Q psy17610 86 SLQYNPVNNKVFVGTV----------NCEIFLIDMNSGFTLTLVNTC-----HTSAIYDLQFPVNFSSVFATCS--KNDI 148 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~~~~~--d~~i 148 (515)
.++|+|||++|+++.. ++.|.+||..+++....+... +......++|+|||++|+++.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 8999999999999863 678999999986555444321 2245678999999999999875 5789
Q ss_pred EEEeCCCCceeEE-EEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCC-CceEEEec-----CCCCCCeEEEEEcCC
Q psy17610 149 RIWSVRTLNELLR-ISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQS-GKLKFIIP-----NAHNRGVTALAITQD 220 (515)
Q Consensus 149 ~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~-~~~~~~~~-----~~~~~~v~~~~~~~~ 220 (515)
.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.||.+.+|+.+. ++...... .....++ .+.++++
T Consensus 134 ~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 210 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD 210 (361)
T ss_dssp EEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC
T ss_pred EEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc
Confidence 9999999887766 43222 1225567765 6778888999999998865 55442211 1122222 3334567
Q ss_pred CCEEEEecCCCcEEEEEccCCceeeEEeecc------c----cCceEEEEEecCCCEEEEEeC-----------CCcEEE
Q psy17610 221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKE------H----TSSVSVIQIKSDSKEAMSAST-----------DGTCVL 279 (515)
Q Consensus 221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~----~~~v~~~~~~~~~~~l~~~~~-----------d~~i~i 279 (515)
+..++..+.++.+.++|+..........+.. + ......++++|+++.++++.. .+.|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 7777777888999999986443332222110 0 111223789999888877653 347999
Q ss_pred EEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC--ceEEEEecCCCccEEEEEEcCCCC
Q psy17610 280 WDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG--SIIRSLEGSDVAAVNCVDFVDDGK 350 (515)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~~~ 350 (515)
||+.+.+.+..+..+. +..++++|++++++++.. +.|.+||..++ +.+..+.... .....++++|+|+
T Consensus 291 iD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G-~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAA-EASLQVQFHPVGG 360 (361)
T ss_dssp EETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSC-SSEEEEEECCCSC
T ss_pred EECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCC-CCcEEEEecCCCC
Confidence 9999999999998888 999999999999998887 99999999999 8888875433 5677899999985
No 170
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.88 E-value=1.8e-18 Score=165.70 Aligned_cols=318 Identities=12% Similarity=0.052 Sum_probs=231.9
Q ss_pred ecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC--CCceeEEEEecCe
Q psy17610 90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR--TLNELLRISVMNM 167 (515)
Q Consensus 90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~ 167 (515)
+|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+|||+++++++.++.|.+||+. +++.+.++.....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC
Confidence 34455666667789999999999765555443 2356799999999999999999999999996 8888888876554
Q ss_pred EEEEEEEe----eCCCEEEEEeC-CCeEEEEecCCCceEEEecCC---------CCC-CeEEEEEcCCCCE-EEEecCCC
Q psy17610 168 ICACIVFT----YDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNA---------HNR-GVTALAITQDGTR-LLSGGGEG 231 (515)
Q Consensus 168 ~v~~~~~~----~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~---------~~~-~v~~~~~~~~~~~-l~~~~~d~ 231 (515)
...++|+ |||++++++.. ++.+.++|..+.+.+..+... |.. .+..+..++++.. ++....+|
T Consensus 242 -P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 242 -ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp -EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred -CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 4789999 69998887765 589999999999988776432 222 6788888887654 44556679
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccE---EEEE-EcCC
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMI---MSAA-YHPS 305 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~---~~~~-~~~~ 305 (515)
.|.++|...........+ ........+.|+|++++++++. .++.|.++|+.+++....+.. .... .... ++|+
T Consensus 321 ~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~ 399 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT 399 (567)
T ss_dssp EEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT
T ss_pred eEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCC
Confidence 999999864432222222 2344567889999999987766 578999999999988777765 2211 1222 5787
Q ss_pred CcEEE-EEE-CCCeEEEEeCCC-------CceEEEEecCCCccEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCC
Q psy17610 306 EVQLI-TCS-TNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-------DQIVKMWMYREG 369 (515)
Q Consensus 306 ~~~l~-~~~-~~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~ 369 (515)
+..+. +.. .++.|.++|..+ .+.++++.... ..-..+..+|+++++.+... .+.|.++|+.+.
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 55554 443 468999999988 67888887653 33345778999999998763 358999999876
Q ss_pred -----eee-eecc--------CCCCCeeEEEECCCCcEEEEEe-----CCCcEEEEeCCCCc
Q psy17610 370 -----VPC-FVGI--------GHAASITKIKISPDKKVIVSVS-----ADGGIFLWTFPELE 412 (515)
Q Consensus 370 -----~~~-~~~~--------~~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~ 412 (515)
... ..+. .....+..+.|+|+|+.+..+. .++.|.++|..+.+
T Consensus 479 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 479 TGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp CCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 211 2221 1245788999999999887763 37899999988764
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=3.4e-21 Score=179.97 Aligned_cols=280 Identities=8% Similarity=-0.023 Sum_probs=190.9
Q ss_pred EEEEEEecCCCEEEEEecC---ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610 84 ISSLQYNPVNNKVFVGTVN---CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL 160 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 160 (515)
+.+++|||||++|+..... ..|++||+.+++ ...+..++......+.|+|||+.|+.++.++.|.+||+.+++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 6778999999998887543 479999998864 333333333333347899999999999999999999999887665
Q ss_pred EEEecCeEEEE-------------------EEEeeCCCEEEEE-----eCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610 161 RISVMNMICAC-------------------IVFTYDGKAILSG-----WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA 216 (515)
Q Consensus 161 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~ 216 (515)
....+...... +.|+|+++.++.. ..+..|.+||+.+++..... .+...+..+.
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~ 194 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPI 194 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccce
Confidence 55534332222 3456677665543 35668999999988876554 4667789999
Q ss_pred EcC-CCCEEEEecCC------CcEEEEEccCCceeeEEeeccc-cCceEEEEEecCCCEEEEEeCC-----CcEEEEEcc
Q psy17610 217 ITQ-DGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLI 283 (515)
Q Consensus 217 ~~~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~ 283 (515)
|+| +++.|+..+.+ ..|.+|++.... ........ ...+..+.|+|++++|+.++.+ +.|.+||+.
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 999 78877765543 358888875332 22222211 2357789999999988777654 449999998
Q ss_pred cceEEEEEEcCccEEEEEEcC-CCcEEEEEE----------------CCCeEEEEeCCCCceEEEEecCCCc--------
Q psy17610 284 KSTRLIIMILPSMIMSAAYHP-SEVQLITCS----------------TNKMIDYWETCDGSIIRSLEGSDVA-------- 338 (515)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~----------------~~~~i~~~d~~~~~~~~~~~~~~~~-------- 338 (515)
+++.......+. .. ..|+| +++.++.+. .+..|++||+.+++.. .+..+...
T Consensus 273 ~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~ 349 (396)
T 3c5m_A 273 TLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDR 349 (396)
T ss_dssp TCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBS
T ss_pred CCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccc
Confidence 887655444443 33 88999 999888754 3478999999887653 33333211
Q ss_pred --cEEEEEEcCCCCEEEEEcC-CCe--EEEEEccCCee
Q psy17610 339 --AVNCVDFVDDGKYFLTGGA-DQI--VKMWMYREGVP 371 (515)
Q Consensus 339 --~i~~~~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~ 371 (515)
....++|+|+|+.|+..+. ++. |..+++.+++.
T Consensus 350 ~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 350 QITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp STTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred cCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 2456789999998877664 444 44445555443
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.87 E-value=6.6e-18 Score=161.89 Aligned_cols=293 Identities=11% Similarity=-0.008 Sum_probs=210.1
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECC--CCceeEEeeccCccCeEEEEeC----CCCcEEEEEec-CCcEEEEe
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN--SGFTLTLVNTCHTSAIYDLQFP----VNFSSVFATCS-KNDIRIWS 152 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~~~~~-d~~i~iw~ 152 (515)
....+..++|||||+++++++.++.|.+||+. +++.+..+..+ .....++|+ |||+++++++. ++++.++|
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 34466789999999999999999999999995 65555444332 235789999 69999999887 69999999
Q ss_pred CCCCceeEEEEec-----------CeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610 153 VRTLNELLRISVM-----------NMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD 220 (515)
Q Consensus 153 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 220 (515)
..+.+.+..+... ...+..+..++++..++ ....+|.|.++|..+.+...............+.|+|+
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 9999998877632 12577888888876554 44567999999988764332221233455778999999
Q ss_pred CCEEEEec-CCCcEEEEEccCCceeeEEeecc-----ccCceEEEEEecCCCEEEEEe--CCCcEEEEEccc-------c
Q psy17610 221 GTRLLSGG-GEGQVRIWKLTRESQSLQCVLKE-----HTSSVSVIQIKSDSKEAMSAS--TDGTCVLWDLIK-------S 285 (515)
Q Consensus 221 ~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~-------~ 285 (515)
+++++++. .++.|.++|..+.+ ....+.. |.+.-..+ ++|++..++..+ .+++|.++|..+ .
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~k--l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGK--LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCEEEEEeCCCCeEEEEECCCCc--EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 99887655 57899999996543 3332222 33222222 578755555443 468999999987 5
Q ss_pred eEEEEEEcCc-cEEEEEEcCCCcEEEEEEC-------CCeEEEEeCCCC-----ce-EEEEec-------CCCccEEEEE
Q psy17610 286 TRLIIMILPS-MIMSAAYHPSEVQLITCST-------NKMIDYWETCDG-----SI-IRSLEG-------SDVAAVNCVD 344 (515)
Q Consensus 286 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-------~~~i~~~d~~~~-----~~-~~~~~~-------~~~~~i~~~~ 344 (515)
+.+..+.... ....+..+|+++++.+... .+.|.++|+.+. .. ...+.. .....+..+.
T Consensus 430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 6777776653 3355778999999998763 358999998876 22 233321 1225788999
Q ss_pred EcCCCCEEEEEc-----CCCeEEEEEccCCeeeeeccC
Q psy17610 345 FVDDGKYFLTGG-----ADQIVKMWMYREGVPCFVGIG 377 (515)
Q Consensus 345 ~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~ 377 (515)
|+|+|+.+.++. .++.|.++|.++++....+..
T Consensus 510 ~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 510 FNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred ECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 999999887763 378999999999998887754
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=2.7e-20 Score=185.91 Aligned_cols=326 Identities=7% Similarity=-0.037 Sum_probs=212.8
Q ss_pred EecCCCcEEEEEEecCCCEEEEE--ecCceEEEEECCCCceeEEeeccCccCeE---------EEEeC--CCCcE-EEEE
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVG--TVNCEIFLIDMNSGFTLTLVNTCHTSAIY---------DLQFP--VNFSS-VFAT 142 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~~~ 142 (515)
+.+|...+..++|++++-+++.. ..++...||....+..... +..|...+. ...|+ |||+. |+.+
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES-ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE-SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce-eCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 44688999999999876666665 4478899998644334333 344655555 55565 99998 7766
Q ss_pred ec-CCcEEEEeCC--CCceeEEEEe-----cCeEEEEEEEeeCCCEEEEEeCC----------CeEEEEecCC------C
Q psy17610 143 CS-KNDIRIWSVR--TLNELLRISV-----MNMICACIVFTYDGKAILSGWND----------GFIRCFTPQS------G 198 (515)
Q Consensus 143 ~~-d~~i~iw~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~~~~~~~------~ 198 (515)
+. +..|.+|++. .......+.. +...+..++|+|||+.|++++.+ ..|.+||+.+ +
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred ECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 54 5567777765 2044555555 56788999999999999988876 5899999988 6
Q ss_pred ceEEEecC-CCCCCeEEEEEcCCCCEEEEecCC--------CcEEEEEcc-CCc-eeeEEeeccccCceEEEEEecCCCE
Q psy17610 199 KLKFIIPN-AHNRGVTALAITQDGTRLLSGGGE--------GQVRIWKLT-RES-QSLQCVLKEHTSSVSVIQIKSDSKE 267 (515)
Q Consensus 199 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iw~~~-~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 267 (515)
+.. .+ . .+...+..++|+|||++|+.++.+ ..|.+||+. .+. ........+|...+..+.|+|||++
T Consensus 178 ~~~-~l-~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 178 AVR-EL-SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GSE-ES-SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred cee-EE-EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 554 33 3 455678889999999999977754 379999996 231 1333344455788999999999997
Q ss_pred EEEEeCCC--cEEEEEcccceEEEEEEcCcc---------EEEEEEcCCCcEEEEEECCCeEEEE--eCCCCceEEEEec
Q psy17610 268 AMSASTDG--TCVLWDLIKSTRLIIMILPSM---------IMSAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLEG 334 (515)
Q Consensus 268 l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~i~~~--d~~~~~~~~~~~~ 334 (515)
++++..++ .|.+||+.+++.......... +..++++|+++.++++.. +.+++| |+.+++ +..+..
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~ 333 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG 333 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC
Confidence 77777788 566677666665443333221 457888999999999988 888888 655554 566655
Q ss_pred CCCccEEEE-EEcCCCCEEEEEcCCC--eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 335 SDVAAVNCV-DFVDDGKYFLTGGADQ--IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 335 ~~~~~i~~~-~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
+. ..+..+ +++++.-+++.++.+. .|.++|+.+++.......+...+....+.+.....+....+..+..|-.
T Consensus 334 ~~-~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~ 409 (662)
T 3azo_A 334 PW-TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIY 409 (662)
T ss_dssp SC-CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEE
T ss_pred CC-CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEE
Confidence 53 566666 4544333344445554 4555666676654433444433333333333333333323335555543
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=7.2e-20 Score=182.84 Aligned_cols=286 Identities=9% Similarity=-0.013 Sum_probs=199.0
Q ss_pred eccCccCeEEEEeCCCCcEEEEE--ecCCcEEEEeCCCCceeEEEEecCeEEE---------EEEEe--eCCCE-EEEEe
Q psy17610 120 NTCHTSAIYDLQFPVNFSSVFAT--CSKNDIRIWSVRTLNELLRISVMNMICA---------CIVFT--YDGKA-ILSGW 185 (515)
Q Consensus 120 ~~~h~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~ 185 (515)
+.+|...+..++|++++-.++.. ..++...||....+.....+..+...+. ...|+ |||+. |+.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 45688899999999885444544 3378899999765566666666665555 55566 99998 77665
Q ss_pred C-CCeEEEEecC--C-CceEEEecCC-----CCCCeEEEEEcCCCCEEEEecCC----------CcEEEEEccCCc----
Q psy17610 186 N-DGFIRCFTPQ--S-GKLKFIIPNA-----HNRGVTALAITQDGTRLLSGGGE----------GQVRIWKLTRES---- 242 (515)
Q Consensus 186 ~-dg~i~~~~~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iw~~~~~~---- 242 (515)
. +..|.++++. + ++.. .+ .. |...+..++|+|||+.|++++.+ ..|++||+....
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~-~l-~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPR-PL-TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCE-EC-SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CCCCeEEEEcCCCCCCCCCE-ec-cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 4 5677777776 3 4433 33 23 66778999999999999988876 589999986410
Q ss_pred eeeEEeec-cccCceEEEEEecCCCEEEEEeCC--------CcEEEEEcc-cc---eEEEEEEc-CccEEEEEEcCCCcE
Q psy17610 243 QSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTD--------GTCVLWDLI-KS---TRLIIMIL-PSMIMSAAYHPSEVQ 308 (515)
Q Consensus 243 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~ 308 (515)
... ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +....... ...+..+.|+|+++.
T Consensus 177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 222 2334 455678889999999999988755 379999998 56 44444443 467899999999997
Q ss_pred EEEEECCC--eEEEEeCCCCceEEEEecCCCcc--------EEEEEEcCCCCEEEEEcCCCeEEEE--EccCCeeeeecc
Q psy17610 309 LITCSTNK--MIDYWETCDGSIIRSLEGSDVAA--------VNCVDFVDDGKYFLTGGADQIVKMW--MYREGVPCFVGI 376 (515)
Q Consensus 309 l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~ 376 (515)
++++..++ .|..||+.+++.......+. .. +..++|+|++++++++.. +.++|| |..+++ +..+.
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREE-EFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSS-BSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccc-cccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 77777777 67778876766543332221 11 467899999999999998 999998 554554 56777
Q ss_pred CCCCCeeEE-EECCCCcEEEEEeCCCcEEE--EeCCCC
Q psy17610 377 GHAASITKI-KISPDKKVIVSVSADGGIFL--WTFPEL 411 (515)
Q Consensus 377 ~~~~~i~~~-~~~~~~~~l~~~~~dg~i~i--w~~~~~ 411 (515)
.|...+..+ +++++.-++++++.+....+ +|+...
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 787778777 55444444445555554444 455443
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=1.5e-18 Score=157.78 Aligned_cols=272 Identities=15% Similarity=0.085 Sum_probs=195.8
Q ss_pred cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610 125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII 204 (515)
Q Consensus 125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 204 (515)
..|.+++|+|++..++..+.++.++.| .++....+..+...+.+++|+|+++.++++..++.|.+||.++++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 457888999998877777788899999 35566667766667789999999997778888999999999988766544
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC------C
Q psy17610 205 PNAHNRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST------D 274 (515)
Q Consensus 205 ~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d 274 (515)
..+...+.+++++++|+++++...+ +.|.+||..............+...+..++++|+++.+++... .
T Consensus 83 -~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 83 -VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp -ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred -eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 2456789999999999988877666 6899999864433211111124457889999999987776653 3
Q ss_pred CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE-ECCCeEEEEeCCC-CceEEEE------ecCCCccEEEEEEc
Q psy17610 275 GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC-STNKMIDYWETCD-GSIIRSL------EGSDVAAVNCVDFV 346 (515)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~i~~~d~~~-~~~~~~~------~~~~~~~i~~~~~~ 346 (515)
+.|..+|..+++..........+..++++|+++.++++ ..++.|.+||..+ +..+..+ .......+..++++
T Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d 241 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID 241 (333)
T ss_dssp EEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB
T ss_pred ceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC
Confidence 55666776555544333333457889999999866555 4578999999864 3332211 11111467889999
Q ss_pred CCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCC------CeeEEEECCCCcEEEEEeCCC
Q psy17610 347 DDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA------SITKIKISPDKKVIVSVSADG 401 (515)
Q Consensus 347 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~dg 401 (515)
++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+||++.|+.++.++
T Consensus 242 ~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 242 SDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 99998888777889999998 4555555543332 689999999987776665553
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=4.6e-18 Score=155.59 Aligned_cols=268 Identities=9% Similarity=0.026 Sum_probs=184.2
Q ss_pred CcEEEEEEecCCCEEEEEe---------cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---C--c
Q psy17610 82 SGISSLQYNPVNNKVFVGT---------VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---N--D 147 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~--~ 147 (515)
..+...++ ||+++|... .++.|++||+++++. ..+ ..+..++|+|||++|+.++.+ + .
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI-----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE-----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc-----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 45677777 888887653 257899999998653 222 568899999999999988764 3 3
Q ss_pred EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---------------------------CeEEEEecCCCce
Q psy17610 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---------------------------GFIRCFTPQSGKL 200 (515)
Q Consensus 148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~~~~~~~~~~ 200 (515)
|.+|++.+++...... ... +..++|+|||+.|+.++.+ ..|.+||+.+++.
T Consensus 87 l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 87 IWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 7888888776554443 344 8999999999999887642 5789999998887
Q ss_pred EEEecCCCCCCeEEEEEcCCCCEEEEecCCC-------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEG-------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST 273 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 273 (515)
...+.. . .+..+.|+|+| +++++..++ ...+|.++.. ... .+..+ ..+..+ +|+|+.++.++.
T Consensus 165 ~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~-~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 165 IEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG--KEE-KMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp EEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT--EEE-EEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred EeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC--ceE-EeccC-cceeeE--CCCCCEEEEEEc
Confidence 444422 3 78899999999 777775542 4566655422 222 22233 444444 999999988775
Q ss_pred C--------CcEEEEEcccceEEEEEEc-CccEEE-EEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEE
Q psy17610 274 D--------GTCVLWDLIKSTRLIIMIL-PSMIMS-AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343 (515)
Q Consensus 274 d--------~~i~iwd~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 343 (515)
+ ..|.+|| +++....... ...+.. +.|+ ++ .++++..++.+++| +.+++.. .+..+ ...+.++
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~-~~~v~~~ 307 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKG-RHWIMGF 307 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECS-SSEEEEE
T ss_pred cccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecC-CCeEEee
Confidence 4 3678888 4544333222 345665 8899 88 88888899999999 7766553 33333 3788999
Q ss_pred EEcCCCCEEEEEcCCCeE-EEEEccCCeeeeeccCCCC
Q psy17610 344 DFVDDGKYFLTGGADQIV-KMWMYREGVPCFVGIGHAA 380 (515)
Q Consensus 344 ~~~~~~~~l~~~~~dg~i-~i~d~~~~~~~~~~~~~~~ 380 (515)
+|+| .++++++.++.. .+|.+. ++ ...+..|..
T Consensus 308 ~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 308 DVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp EESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred eeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 9999 677777766654 777765 44 344555544
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=3.4e-18 Score=154.60 Aligned_cols=241 Identities=14% Similarity=0.090 Sum_probs=186.8
Q ss_pred eEEEEEEEeeCCCEEEEEeCC------------------------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610 167 MICACIVFTYDGKAILSGWND------------------------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT 222 (515)
Q Consensus 167 ~~v~~~~~~~~~~~l~~~~~d------------------------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 222 (515)
..+.+++++|+|+.+++...+ +.|.+||..+++........+-..+..++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 457899999999988887766 47999999999988776445666889999999999
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEee---------ccccCceEEEEEec-CCCEEEEEe-CCCcEEEEEcccceEEEEE
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVL---------KEHTSSVSVIQIKS-DSKEAMSAS-TDGTCVLWDLIKSTRLIIM 291 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~ 291 (515)
++++...++.|++|+..... .....+ .++......++++| ++..+++.+ .++.|++|+ .+++.+..+
T Consensus 104 l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp EEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 88888889999999975321 122223 23445688999999 777777776 689999999 456666555
Q ss_pred EcC-----------ccEEEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEE----
Q psy17610 292 ILP-----------SMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLT---- 354 (515)
Q Consensus 292 ~~~-----------~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~---- 354 (515)
... ..+..++++|+ +..+++...++.|++||..+++.+..+... ....+..++++| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 321 13789999998 677777777899999999989998888543 225678899999 433333
Q ss_pred ---EcCCCeEEEEEccCCeeeeec---cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 355 ---GGADQIVKMWMYREGVPCFVG---IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 355 ---~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
...+..|++|+..+++.+..+ .++...+..++++|+|.++++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 334558999999999888876 36677799999999998888888899999999754
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=1.3e-17 Score=148.01 Aligned_cols=240 Identities=13% Similarity=0.130 Sum_probs=180.5
Q ss_pred cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe------cCeEEEEEEEe-eCCCEEEEEeC-CCeEEEE
Q psy17610 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV------MNMICACIVFT-YDGKAILSGWN-DGFIRCF 193 (515)
Q Consensus 122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~-dg~i~~~ 193 (515)
++...+.+++++|++..+++...++.|.+||.+ ++.+..+.. +...+..+++. ++++.+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 456678999999999877777778999999987 666665542 22457889995 66665555533 7899999
Q ss_pred ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec--cccCceEEEEEecCCCEEEEE
Q psy17610 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK--EHTSSVSVIQIKSDSKEAMSA 271 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 271 (515)
| .+++....+...+...+..++++++|+++++...++.|.+|+... .....+. .+...+..++++++++.+++.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9 567776666445556789999999999888878889999999642 2222332 345568999999999877777
Q ss_pred eCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCC-eEEEEeCCCCceEEEEecCCC-ccEEEEEEc
Q psy17610 272 STDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGSDV-AAVNCVDFV 346 (515)
Q Consensus 272 ~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~ 346 (515)
..++.|.+||.. ++.+..+... ..+..++++++++.+++...++ .|.+||. +++.+..+..+.. ..+..++++
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 778999999974 4555555443 4688999999999888887776 9999995 5677777765431 347799999
Q ss_pred CCCCEEEEEcCCCeEEEEEccCC
Q psy17610 347 DDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 347 ~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
|+|+++++ +.++.|++|++...
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccc
Confidence 99987777 56899999998654
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=1.8e-17 Score=147.05 Aligned_cols=239 Identities=9% Similarity=0.052 Sum_probs=177.3
Q ss_pred CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEee-----ccCccCeEEEEe-CCCCcEEEEEec-CCcEEEEe
Q psy17610 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN-----TCHTSAIYDLQF-PVNFSSVFATCS-KNDIRIWS 152 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~h~~~v~~~~~-~~~~~~l~~~~~-d~~i~iw~ 152 (515)
+-..+.+++++|+++++++...++.|.+||.+. ....... .+|...+..+++ .+++..+++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 456789999999999888888899999999874 4443332 134567899999 567655555433 88999999
Q ss_pred CCCCceeEEEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC-CCCCCeEEEEEcCCCCEEEEecCC
Q psy17610 153 VRTLNELLRISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-AHNRGVTALAITQDGTRLLSGGGE 230 (515)
Q Consensus 153 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 230 (515)
.+++.+..+.. +...+..++++|+|+.+++...++.|.+|+.. ++....+.. .+...+..++++++|+++++...+
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence 56777666642 23467899999999977777778999999965 555544422 345678999999999988887888
Q ss_pred CcEEEEEccCCceeeEEeecc--ccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccceEEEEEEcCc---cEEEEEEcC
Q psy17610 231 GQVRIWKLTRESQSLQCVLKE--HTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKSTRLIIMILPS---MIMSAAYHP 304 (515)
Q Consensus 231 ~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~ 304 (515)
+.|++||... .....+.. +...+..++++++++++++...++ .|.+||. +++.+..+.... .+..++++|
T Consensus 185 ~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 185 HCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp TEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 9999999742 23333332 335788999999998888887775 9999996 455555554332 377999999
Q ss_pred CCcEEEEEECCCeEEEEeCCCC
Q psy17610 305 SEVQLITCSTNKMIDYWETCDG 326 (515)
Q Consensus 305 ~~~~l~~~~~~~~i~~~d~~~~ 326 (515)
+++.+++ +.++.|++|+....
T Consensus 261 ~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 261 DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcEEEE-CCCCeEEEEEcccc
Confidence 9986666 67999999997654
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=2.5e-16 Score=140.75 Aligned_cols=283 Identities=10% Similarity=-0.001 Sum_probs=201.6
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
..+..+...+.+++++++|+++++...++.|.+||.. +.........+...+.++++++++..+++...++.|..||..
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3344466789999999999977766667899999988 443333333355779999999999777766668889999986
Q ss_pred CCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610 155 TLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232 (515)
Q Consensus 155 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 232 (515)
++ ...+.. ....+..+++.++++.+++...++.|..||. +++........+...+..+++.++|+..++...++.
T Consensus 87 -g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 87 -GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp -SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred -Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 33 333332 3456789999999987777777889999998 555543332334567899999999988887777789
Q ss_pred EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEE
Q psy17610 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQL 309 (515)
Q Consensus 233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 309 (515)
|..||. ...... .........+..++++++++..++...++.|..||. +++... +..+ ..+..++++++++.+
T Consensus 164 i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 164 IGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp EEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEE
T ss_pred EEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEE
Confidence 999997 332221 223334556789999999987776666789999998 665433 3333 468899999999866
Q ss_pred EEEECCCeEEEEeCCCCceEEEEec-CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610 310 ITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 310 ~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
++...++.|..||. +++ +..+.. .....+.++++ ++|++.++.. .+.+..++.+++
T Consensus 240 v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 240 FTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred EeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 66657889999998 443 334432 22357889999 8888776655 567777777654
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=4.2e-18 Score=154.07 Aligned_cols=242 Identities=12% Similarity=0.053 Sum_probs=180.5
Q ss_pred CCcEEEEEEecCCCEEEEEecC------------------------ceEEEEECCCCceeEEeeccCccCeEEEEeCCCC
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVN------------------------CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNF 136 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 136 (515)
-+.+.+++++|+|+++++...+ +.|.+||.++++.......++......++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3779999999999998887766 4799999998766554444566688999999999
Q ss_pred cEEEEEecCCcEEEEeCCCCc-eeEEEE---------ecCeEEEEEEEee-CCCEEEEEe-CCCeEEEEecCCCceEEEe
Q psy17610 137 SSVFATCSKNDIRIWSVRTLN-ELLRIS---------VMNMICACIVFTY-DGKAILSGW-NDGFIRCFTPQSGKLKFII 204 (515)
Q Consensus 137 ~~l~~~~~d~~i~iw~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~~~~~~~~~~~~~~ 204 (515)
+.+++...++.|++||..... .+..+. .+-.....++++| ++..+++.+ .++.|++|+ .+++....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 877777778999999986442 455552 2223578999999 788777775 689999999 566666655
Q ss_pred cC---------CCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEee--ccccCceEEEEEec------CCC
Q psy17610 205 PN---------AHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVL--KEHTSSVSVIQIKS------DSK 266 (515)
Q Consensus 205 ~~---------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~------~~~ 266 (515)
.. .+-.....++++|+ +.++++...++.|++|+..+ ......+ ..+...+..++++| +++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT--KEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT--CCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC--CcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 21 12234889999998 77777778889999999853 3334443 45666788899998 333
Q ss_pred EEEEEeCCCcEEEEEcccceEEEEEE----cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610 267 EAMSASTDGTCVLWDLIKSTRLIIMI----LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 267 ~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~ 325 (515)
..++...+..|++|+..+++.+..+. ....+..++++|++..+++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 22233345589999999999888774 234589999999998888888899999998643
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=1.1e-17 Score=153.01 Aligned_cols=257 Identities=11% Similarity=0.097 Sum_probs=178.1
Q ss_pred CCeEEEEEcCCCCEEEEec---------CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC---C--
Q psy17610 210 RGVTALAITQDGTRLLSGG---------GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD---G-- 275 (515)
Q Consensus 210 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-- 275 (515)
..+....+ +|+.++... .++.|.+||+...... .+ ..+..+.|+|||++|+..+.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 34566677 788777542 2567899998644322 22 467889999999999887754 2
Q ss_pred cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---------------------------CeEEEEeCCCCce
Q psy17610 276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---------------------------KMIDYWETCDGSI 328 (515)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------~~i~~~d~~~~~~ 328 (515)
.|.+|++.+++.......+. +..++|+|+++.|+.++.+ ..|++||+.+++.
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 48888998888777666666 9999999999998887632 5799999998877
Q ss_pred EEEEecCCCccEEEEEEcCCCCEEEEEcCCC-------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-
Q psy17610 329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD- 400 (515)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 400 (515)
+..+.. . .+..++|+|+| +++++..++ ...+|.+.+++. ..+..+ ..+..+ +|||++|+.++.+
T Consensus 165 ~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 165 IEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred EeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 455544 2 67789999999 777775542 344544445443 333334 455544 9999998887754
Q ss_pred -------CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEE-eeeccCCcEEEEeecCCeEEEEecCC
Q psy17610 401 -------GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS-AAYHPSEVQLITCSTNKMIDYWETCD 472 (515)
Q Consensus 401 -------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~v~iwd~~~ 472 (515)
..|.+|| ..+. ......+...+.. +.|+ ++ ++++++.++.+++| +.+
T Consensus 237 ~~~~~~~~~l~~~d--~~~~--------------------~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEV--------------------MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCE--------------------EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred cCCccccceEEEEC--CCce--------------------EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 3577776 2110 0011122344665 8899 88 88999999999999 887
Q ss_pred CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE-EEEEE
Q psy17610 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV-KICLY 513 (515)
Q Consensus 473 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v-~iw~~ 513 (515)
++....+. +. ..|.+++|+| .++++++.++.. .+|.+
T Consensus 292 g~~~~~~~-~~-~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 292 GEIKPIAK-GR-HWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp SSEEEEEC-SS-SEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred CceEEEec-CC-CeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 76644443 33 7899999999 677777777765 88865
No 183
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.83 E-value=4.8e-17 Score=145.86 Aligned_cols=256 Identities=10% Similarity=0.010 Sum_probs=182.7
Q ss_pred EEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeeccC------ccCeEEEEeCCCCcEEEEEec--CCcE
Q psy17610 87 LQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTCH------TSAIYDLQFPVNFSSVFATCS--KNDI 148 (515)
Q Consensus 87 ~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~--d~~i 148 (515)
+++||||++++++. .++.|.+||..+.+....+.-+. ...-..++|+|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 99999999988875 35789999999976555543221 124567999999999998874 6899
Q ss_pred EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEec---CCCCCCeE-EEEEc-CCCC
Q psy17610 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIP---NAHNRGVT-ALAIT-QDGT 222 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~---~~~~~~v~-~~~~~-~~~~ 222 (515)
.++|+.+++.+.++..... ...+....+.+++.+.||.+.+.++.+ ++...... .....++. ...|. ++|+
T Consensus 163 sVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp EEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 9999999999988865432 223444456777888899999999876 55533221 11112221 23564 5775
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeec----------cccCceEEEEEecCCCEEEEEeC----------CCcEEEEEc
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLK----------EHTSSVSVIQIKSDSKEAMSAST----------DGTCVLWDL 282 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~ 282 (515)
+++ .+.+|.+.+.|...........+. -.......++++++++.++.... ..+|.+.|+
T Consensus 240 ~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~ 318 (386)
T 3sjl_D 240 LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 318 (386)
T ss_dssp EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC
Confidence 544 556799999998654433332221 11234456788999998887653 257999999
Q ss_pred ccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610 283 IKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 348 (515)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 348 (515)
.+.+.+..+.....+.+++++++++ +|++.. .++.|.++|..+++.+.++... ...+.|.+++|
T Consensus 319 ~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~--~~p~~l~~s~d 384 (386)
T 3sjl_D 319 KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL--GHGPQVITTAD 384 (386)
T ss_dssp TTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC--CSSCCEEEECC
T ss_pred CCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC--CCCceeEECCc
Confidence 9999999999888999999999997 666654 4899999999999999999866 34455666665
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=1.7e-17 Score=150.83 Aligned_cols=270 Identities=13% Similarity=0.046 Sum_probs=191.6
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL 160 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 160 (515)
...|.+++|+|++..++....++.++.|. +.... .+..+...+.+++|+|+++.+++...++.|.+||.++++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWL-EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEE-EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeE-EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 34577889999888777777788899992 23333 334466678999999999866677778999999998877655
Q ss_pred EEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEecC------
Q psy17610 161 RISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGGG------ 229 (515)
Q Consensus 161 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~------ 229 (515)
....+...+.+++++|+++++++...+ +.|.+||.++++....+. ..+...+..++++|+|+++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 444556778999999999977777666 689999998887654332 234567899999999987776653
Q ss_pred CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEccc-ceEEE------EEEcC--ccEEE
Q psy17610 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIK-STRLI------IMILP--SMIMS 299 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~-~~~~~------~~~~~--~~~~~ 299 (515)
.+.|..++.. ...... +..+...+..++|+|+++.++.+ ..++.|.+||+.+ +.... ..... ..+..
T Consensus 161 ~~~l~~~~~~--~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T 2dg1_A 161 LGGVYYVSPD--FRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS 237 (333)
T ss_dssp CEEEEEECTT--SCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred CceEEEEeCC--CCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence 2445555543 222222 22334457889999999866544 5578999999853 22111 11122 36788
Q ss_pred EEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC-----ccEEEEEEcCCCCEEEEEcCC
Q psy17610 300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV-----AAVNCVDFVDDGKYFLTGGAD 358 (515)
Q Consensus 300 ~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d 358 (515)
++++++++.+++...++.|.+||. .++.+..+..+.. ..+.+++|+|+++.|++++.+
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred eEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999999998888888899999998 5777777765431 157899999998777666554
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=1.9e-16 Score=142.85 Aligned_cols=276 Identities=8% Similarity=-0.015 Sum_probs=195.8
Q ss_pred CCCeEEEEecCCCceEEEecC-----CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEE
Q psy17610 186 NDGFIRCFTPQSGKLKFIIPN-----AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260 (515)
Q Consensus 186 ~dg~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~ 260 (515)
.++.|.++|.++++....+.. ........+.+. +++.+++...++.|.+||..+ .+....+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t--~~~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINT--FKEVGRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTT--CCEEEEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcc--cEEEEEcC-CCCCCcEEE
Confidence 378999999999987654421 122446778775 345556666679999999954 44444443 345678899
Q ss_pred EecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc------cEEEEEEcCCCcEEEEEE--CCCeEEEEeCCCCceEEEE
Q psy17610 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS------MIMSAAYHPSEVQLITCS--TNKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 261 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~--~~~~i~~~d~~~~~~~~~~ 332 (515)
++++++.+++...++.|.+||..+++....+.... ....+++ ++..++++. .++.|.++|+.+++.+..+
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 99998544444478999999999999887777665 6667777 344555554 4889999999999988888
Q ss_pred ecCCCccEEEEEEcCCCCEEEEEcCC----------CeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEeCCC
Q psy17610 333 EGSDVAAVNCVDFVDDGKYFLTGGAD----------QIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVSADG 401 (515)
Q Consensus 333 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg 401 (515)
... .....++++|+|+++++...+ +.|.++|..+++....+... ......++++|++++|+++..
T Consensus 169 ~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 169 TIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp ECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred EcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 764 345688999999977776654 78999999988877665432 236899999999999988765
Q ss_pred cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC-CcEEEEe----ecCCeEEEEecCCCeee
Q psy17610 402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS-EVQLITC----STNKMIDYWETCDGSII 476 (515)
Q Consensus 402 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~----~~dg~v~iwd~~~~~~~ 476 (515)
.|.+||..+.+...... .. ........++++|+ +...++. ..++.|.+||.. ++.+
T Consensus 245 ~v~~~d~~t~~~~~~~~--~~----------------~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPF--LE----------------FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp SEEEEETTCSSCCSSCS--BC----------------CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred EEEEEECCCCceeeeee--ec----------------CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 89999987654210000 00 01234788999995 5555554 568899999987 9888
Q ss_pred eeecccccceEEEEEE
Q psy17610 477 RSLEGSDVAAVNCVDF 492 (515)
Q Consensus 477 ~~~~~~~~~~v~~~~~ 492 (515)
.++... .....++|
T Consensus 306 ~~i~~G--~~P~~~~~ 319 (328)
T 3dsm_A 306 DEFYVG--IIPGAFCW 319 (328)
T ss_dssp EEEEEE--ESEEEEEE
T ss_pred EEEEec--cCcceEEE
Confidence 887643 34455555
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=1.1e-16 Score=142.55 Aligned_cols=243 Identities=11% Similarity=0.026 Sum_probs=175.7
Q ss_pred EEecCCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 76 YLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
.+..+.....+++|+|+++ +++++..++.|..|+..++ . ..+..+...+.+++++|+|+.+++...++.|.+||..
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L-SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E-EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e-EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 3445667788999999998 7788888999999999985 3 3334467789999999999876666667899999998
Q ss_pred CCceeEEEEecC----eEEEEEEEeeCCCEEEEE----e-------------CCCeEEEEecCCCceEEEecCCCCCCeE
Q psy17610 155 TLNELLRISVMN----MICACIVFTYDGKAILSG----W-------------NDGFIRCFTPQSGKLKFIIPNAHNRGVT 213 (515)
Q Consensus 155 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~----~-------------~dg~i~~~~~~~~~~~~~~~~~~~~~v~ 213 (515)
+++......... ..+..++++|+|+.+++. + ..+.|..++.. ++... + ..+.....
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~-~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-P-IRDRVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-E-ECCCSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-e-ecCCCCCc
Confidence 877544332221 234578999999987763 2 13466667665 54433 3 34566789
Q ss_pred EEEEcCCCCEEEEecCCCcEEEEEccC-Cce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE
Q psy17610 214 ALAITQDGTRLLSGGGEGQVRIWKLTR-ESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291 (515)
Q Consensus 214 ~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 291 (515)
.++|+|+++.+++.+.++.|.+|++.. ... .....+..+...+..++++++|++.++. ++.|.+||.. ++....+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 999999999887778889999999862 222 1122223345567789999999866655 7889999986 6677777
Q ss_pred EcCccEEEEEE-cCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610 292 ILPSMIMSAAY-HPSEVQLITCSTNKMIDYWETCDGSI 328 (515)
Q Consensus 292 ~~~~~~~~~~~-~~~~~~l~~~~~~~~i~~~d~~~~~~ 328 (515)
..+..+.+++| .|+++.|++++.+ .+..++..+.+.
T Consensus 253 ~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp ECSSCCCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred ECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 66655888999 5899988888875 455666666544
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2.2e-15 Score=134.51 Aligned_cols=279 Identities=10% Similarity=-0.003 Sum_probs=198.7
Q ss_pred cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199 (515)
Q Consensus 122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 199 (515)
.+...+.+++++++|..+++...++.|.+||.. ++ ...+. .....+..+++++++..+++...++.|..|+.. ++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 355678999999999876666668899999988 54 33333 234568899999999877777668899999986 44
Q ss_pred eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL 279 (515)
Q Consensus 200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 279 (515)
............+..+++.++++++++...++.|..||.. .... ..........+..+++.+++...++...++.|..
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 3222212345678999999999888877778899999973 2222 2223334556889999999987777767789999
Q ss_pred EEcccceEEEEEE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 280 WDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 280 wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
||. +++...... ....+..+++.+++..+++...++.|..||. +++............+.+++++++|+++++...
T Consensus 167 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 167 ITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred EcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccC
Confidence 998 655443211 1235789999999997777667889999999 666443212223367889999999997777667
Q ss_pred CCeEEEEEccCCeeee-eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 358 DQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
++.|..||. +++... ....+...+.++++ +++++.++.. .+.+..++..+
T Consensus 245 ~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 245 ANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp TTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 889999998 444322 23445567899999 8888776654 56777777654
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.81 E-value=1e-16 Score=143.66 Aligned_cols=292 Identities=12% Similarity=0.083 Sum_probs=205.1
Q ss_pred EEEecCCCEEEEEec-----CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEE
Q psy17610 87 LQYNPVNNKVFVGTV-----NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIW 151 (515)
Q Consensus 87 ~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw 151 (515)
....|+++.+++... ++.|.++|..+++.+..+..+ ..+ .++++|||++++++. .++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 455789999888865 679999999997665555443 334 499999999998876 25789999
Q ss_pred eCCCCceeEEEEecC-------eEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610 152 SVRTLNELLRISVMN-------MICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT 222 (515)
Q Consensus 152 ~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 222 (515)
|..+++.+.++.... .....++|+|||++++++.. ++.|.++|+.+++.+.++..+. . ...+....+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g---~-~~~~P~g~~ 190 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---C-YHIFPTAPD 190 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E-EEEEEEETT
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC---c-ceeecCCCc
Confidence 999999998886532 13456899999999998864 6899999999999988884322 1 222333455
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeeccc----cCceE-EEEEe-cCCCEEEEEeCCCcEEEEEcccce--EEEEEE--
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEH----TSSVS-VIQIK-SDSKEAMSASTDGTCVLWDLIKST--RLIIMI-- 292 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~~v~-~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~-- 292 (515)
.+++.+.||.+.+.++...... ......+ ..++. ...|. ++|+ ++..+.+|++.+.|+.+.. ....+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEECCCEESS
T ss_pred eeEEECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCc-EEEEeCCCEEEEEECCCCcceeecceecc
Confidence 6777788888888887542111 1111111 12221 23554 5664 4446678999999997653 222222
Q ss_pred ---------cCccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EE
Q psy17610 293 ---------LPSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YF 352 (515)
Q Consensus 293 ---------~~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l 352 (515)
.+.....++++++++.+++... ...|.++|+.+++.+..+... ..+..+++++|++ +|
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLL 346 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEE
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEE
Confidence 1223345777999998888653 257999999999999999876 4788999999997 66
Q ss_pred EEE-cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610 353 LTG-GADQIVKMWMYREGVPCFVGIGHAASITKIKISPD 390 (515)
Q Consensus 353 ~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 390 (515)
++. ..++.|.++|..+++.+.++..- ..-..|.+++|
T Consensus 347 y~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 664 45899999999999988877543 23345666655
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=8.5e-17 Score=161.43 Aligned_cols=276 Identities=10% Similarity=0.056 Sum_probs=193.1
Q ss_pred cCCCEEEEEecC-----ceEEEEECCCCceeEEe-----eccCccCeEEEEeCCCCcEEEEEecCC-----cEEEEeCCC
Q psy17610 91 PVNNKVFVGTVN-----CEIFLIDMNSGFTLTLV-----NTCHTSAIYDLQFPVNFSSVFATCSKN-----DIRIWSVRT 155 (515)
Q Consensus 91 ~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~ 155 (515)
|+|++++....+ +.|++.+..++.....+ ..+|...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 889888776543 24566565554322211 123445688999999999998887633 899999999
Q ss_pred CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe----------------EEEEecCCCce--EEEec-CCCCCCeEEEE
Q psy17610 156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGF----------------IRCFTPQSGKL--KFIIP-NAHNRGVTALA 216 (515)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~~~~~~~~~~--~~~~~-~~~~~~v~~~~ 216 (515)
++.+.... ....+..++|+|||+.|+.++.++. |++|++.+++. ...+. ..|...+..+.
T Consensus 161 g~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 88765322 2223567899999999999887765 99999988762 22221 23455688999
Q ss_pred EcCCCCEEEEecC-----CCcEEEEEccC------CceeeEEeeccccCceEEEEEecCCCEEEEEeCC----CcEEEEE
Q psy17610 217 ITQDGTRLLSGGG-----EGQVRIWKLTR------ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD----GTCVLWD 281 (515)
Q Consensus 217 ~~~~~~~l~~~~~-----d~~i~iw~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd 281 (515)
|+|||++|+..+. +..|.+||+.. ... ....+..+...+.. .|+++|+.|+..+.. +.|.+||
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 9999999987654 56899999864 211 23344455555554 588999988877653 3599999
Q ss_pred cccceE---EEEEEcCc--cEEEEEEcCCCcEEEEEECCC--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610 282 LIKSTR---LIIMILPS--MIMSAAYHPSEVQLITCSTNK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT 354 (515)
Q Consensus 282 ~~~~~~---~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 354 (515)
+.++.. ...+.... .+..+.+++++..+++...++ .|.+|++.+++.+..+..+ ...+..+.++|+++.++.
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~ 396 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFY 396 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEE
Confidence 987641 22333323 577888988788888888887 4667788788877788766 478889999999876664
Q ss_pred E----cCCCeEEEEEccCCe
Q psy17610 355 G----GADQIVKMWMYREGV 370 (515)
Q Consensus 355 ~----~~dg~i~i~d~~~~~ 370 (515)
. ...+.++.||+.+++
T Consensus 397 ~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 397 QFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECSSCCCEEEEEETTSSS
T ss_pred EEeCCCCCCEEEEEECCCCc
Confidence 3 235789999998876
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.80 E-value=4.3e-15 Score=135.59 Aligned_cols=276 Identities=10% Similarity=0.038 Sum_probs=194.2
Q ss_pred EEecCCCEEEEEec--Cc---eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEe
Q psy17610 88 QYNPVNNKVFVGTV--NC---EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWS 152 (515)
Q Consensus 88 ~~s~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~ 152 (515)
...|+++++++... .. .|.++|..+++.+..+.. ...+ .++++|||++++++.. ++.|.+||
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC-CCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 44578887777653 22 889999999765544433 3333 9999999999999863 57899999
Q ss_pred CCCCceeEEEEec-------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEE-ecCCCCCCeEEEEEcCCC-
Q psy17610 153 VRTLNELLRISVM-------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFI-IPNAHNRGVTALAITQDG- 221 (515)
Q Consensus 153 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~- 221 (515)
..+++.+.++... ......+.|+|||++|+++.. ++.|.++| .+++.... +.. .. ++.+.|++
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~---~~~~~~~~~ 177 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PT---CYHIHPGAP 177 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cc---eEEEEeCCC
Confidence 9998888777543 122357899999999998874 47899999 99998877 632 22 24445544
Q ss_pred CEEEEecCCCcEEEEEccCCceeeEEe---eccccCc-eEEEEEecCCCEEEEEeCCCcEEEEEcccce--EEEEEEc--
Q psy17610 222 TRLLSGGGEGQVRIWKLTRESQSLQCV---LKEHTSS-VSVIQIKSDSKEAMSASTDGTCVLWDLIKST--RLIIMIL-- 293 (515)
Q Consensus 222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~-- 293 (515)
+.+++.+.||.+.+++. ......... ......+ .....+.+++..++..+.++.+.+.|+.... ....+..
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 45667778999999998 443221111 0011112 1234566666666655678899999986543 2222211
Q ss_pred ---------CccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEE
Q psy17610 294 ---------PSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFL 353 (515)
Q Consensus 294 ---------~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 353 (515)
+.....++++|+++.+++... .+.|.++|+.+++.+.++... .....++|+|||+ +++
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLY 334 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC--CCcCeEEECCCCCeEEE
Confidence 223445789999998887654 357999999999999999765 4578999999999 777
Q ss_pred EEc-CCCeEEEEEccCCeeeeec
Q psy17610 354 TGG-ADQIVKMWMYREGVPCFVG 375 (515)
Q Consensus 354 ~~~-~dg~i~i~d~~~~~~~~~~ 375 (515)
++. .++.|.++|..+++.+..+
T Consensus 335 v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 335 ALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEcCCCCeEEEEECCCCCEEeee
Confidence 776 4899999999999888773
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=1.3e-16 Score=160.06 Aligned_cols=276 Identities=11% Similarity=0.022 Sum_probs=190.8
Q ss_pred CCCcEEEEEecCC-----cEEEEeCCCCceeEEEE------ecCeEEEEEEEeeCCCEEEEEeCCC-----eEEEEecCC
Q psy17610 134 VNFSSVFATCSKN-----DIRIWSVRTLNELLRIS------VMNMICACIVFTYDGKAILSGWNDG-----FIRCFTPQS 197 (515)
Q Consensus 134 ~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~ 197 (515)
|+|++++....++ .+.+.+...++....+. ++...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7787777665422 23344443443322222 1334688999999999999776543 899999999
Q ss_pred CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc----------------EEEEEccCCcee--eEEeeccccCceEEE
Q psy17610 198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ----------------VRIWKLTRESQS--LQCVLKEHTSSVSVI 259 (515)
Q Consensus 198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~iw~~~~~~~~--~~~~~~~~~~~v~~~ 259 (515)
++...... .+ ..+..++|+|||+.|+.++.++. |++|++.+.... .+.....|...+..+
T Consensus 161 g~~~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccc-cC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 98766432 12 23677999999999998887765 999999654432 222233355567889
Q ss_pred EEecCCCEEEEEeC-----CCcEEEEEccc------ce-EEEEEEcC-ccEEEEEEcCCCcEEEEEECC----CeEEEEe
Q psy17610 260 QIKSDSKEAMSAST-----DGTCVLWDLIK------ST-RLIIMILP-SMIMSAAYHPSEVQLITCSTN----KMIDYWE 322 (515)
Q Consensus 260 ~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~----~~i~~~d 322 (515)
.|+|||++|+..+. +..|.+||+.+ +. ....+..+ ..... .++|+++.++..+.. ..|.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 99999999987765 56899999986 42 23333333 33333 588899888777653 3699999
Q ss_pred CCCCc--eEEEEecCCC-ccEEEEEEcCCCCEEEEEcCCCe--EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610 323 TCDGS--IIRSLEGSDV-AAVNCVDFVDDGKYFLTGGADQI--VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 323 ~~~~~--~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 397 (515)
+.++. ....+..+.. ..+..++|++++.++++...++. |.+|++.+++....+..+...+..++++|+++.++..
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 98764 2344444432 36788999988888888888885 5666776777777777778889999999998766643
Q ss_pred -e---CCCcEEEEeCCCCc
Q psy17610 398 -S---ADGGIFLWTFPELE 412 (515)
Q Consensus 398 -~---~dg~i~iw~~~~~~ 412 (515)
+ ..+.+..||+.+.+
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 2 34789999987654
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=2e-16 Score=140.93 Aligned_cols=245 Identities=9% Similarity=-0.019 Sum_probs=175.0
Q ss_pred CceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 156 LNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
+..+..+..+.....+++|+|+++ .++++..++.|..|+..++ ...+ ..+...+.+++++++|+++++...++.|.
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 334455555555668899999998 7778888999999999887 4444 35667799999999999888777778999
Q ss_pred EEEccCCceeeEEe-ecc-ccCceEEEEEecCCCEEEEEeC-----------------CCcEEEEEcccceEEEEEEcCc
Q psy17610 235 IWKLTRESQSLQCV-LKE-HTSSVSVIQIKSDSKEAMSAST-----------------DGTCVLWDLIKSTRLIIMILPS 295 (515)
Q Consensus 235 iw~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~ 295 (515)
+||..+........ ... ....+..++++|+|+++++.+. .+.|..++.. ++.........
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 99985443322211 111 1234678999999998887321 3456666655 44444444445
Q ss_pred cEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCce---EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610 296 MIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSI---IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP 371 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 371 (515)
....++++|+++.+++...++.|.+|++. +++. ...+ ......+..++++++|+++++. ++.|.+|+.. ++.
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 67899999999999666778999999987 4554 3334 3233566789999999976666 7899999986 777
Q ss_pred eeeccCCCCCeeEEEE-CCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 372 CFVGIGHAASITKIKI-SPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 372 ~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
+..+..+.. +++++| +|+++.|++++.++ +.-++..+
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp EEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred EEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 777777767 999999 68999898887763 44444433
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.79 E-value=1.3e-16 Score=139.40 Aligned_cols=214 Identities=13% Similarity=0.110 Sum_probs=171.9
Q ss_pred CcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610 136 FSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA 214 (515)
Q Consensus 136 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~ 214 (515)
++.|++++.++.|.+||.++|+.+.++..+. ..+.++.++|+|+.++ +.++.|..||. +++.+..+..+....+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4688888889999999999999999998766 4678899999999888 45778999999 899888885444457889
Q ss_pred EEEcCCCCEEEEecC-CCcEEEEEccCCceeeEEeec------cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610 215 LAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLK------EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 215 ~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
+.+.++|+.+++.+. ++.+..+|.+ .+.+..+. .+......+++.++|+++++...++.|..||.. ++.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~---Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMK---GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTT---SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCC---CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 999999999998876 7777777753 22222221 222345566788999999999999999999998 999
Q ss_pred EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-----CccEEEEEEcCCCCEEEEEc
Q psy17610 288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-----VAAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~ 356 (515)
+..+..+..+.++...++++.++++..++.|..+|..+++.+.++.... ...+..++..++|+++++..
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9998887777788889999999999989999999999999999987432 12367788888888887764
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=1.2e-16 Score=144.29 Aligned_cols=275 Identities=10% Similarity=-0.083 Sum_probs=191.1
Q ss_pred cCceEEEEECCCCceeEEeec-----cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEe
Q psy17610 101 VNCEIFLIDMNSGFTLTLVNT-----CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFT 175 (515)
Q Consensus 101 ~d~~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 175 (515)
.++.|.++|.++++....+.. ........+.+.. ++.+++...++.|.+||..+++.+.++.. ......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 378999999998654333221 1223467787753 34445555579999999999999888853 3456889999
Q ss_pred eCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCC----CCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEe
Q psy17610 176 YDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHN----RGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCV 248 (515)
Q Consensus 176 ~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~ 248 (515)
++++ +.++. .++.|.+||+.+++....+..+.. .....+++ . +..++++. .++.|.++|+.+. .....
T Consensus 93 ~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~--~~~~~ 167 (328)
T 3dsm_A 93 SDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETD--KVVDE 167 (328)
T ss_dssp ETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTT--EEEEE
T ss_pred CCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCC--eEEEE
Confidence 9984 55555 789999999999998776643321 14556777 3 44455444 4789999998643 33333
Q ss_pred eccccCceEEEEEecCCCEEEEEeCC----------CcEEEEEcccceEEEEEEcC--ccEEEEEEcCCCcEEEEEECCC
Q psy17610 249 LKEHTSSVSVIQIKSDSKEAMSASTD----------GTCVLWDLIKSTRLIIMILP--SMIMSAAYHPSEVQLITCSTNK 316 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~ 316 (515)
+.. ......+.++|+|++++++..+ +.|.++|..+++....+..+ .....++++|+++.++++..
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 332 2335678899999877766554 78999999999887777654 36899999999999988765
Q ss_pred eEEEEeCCCCceEEE-EecCCCccEEEEEEcC-CCCEEEEE----cCCCeEEEEEccCCeeeeeccCCCCCeeEEEE
Q psy17610 317 MIDYWETCDGSIIRS-LEGSDVAAVNCVDFVD-DGKYFLTG----GADQIVKMWMYREGVPCFVGIGHAASITKIKI 387 (515)
Q Consensus 317 ~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 387 (515)
.|.+||..+++.... +..........++++| +++++++. ..++.|.+||.. ++.+..+.. ......++|
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 899999988875321 1111125678999999 56666666 568899999997 877776643 222344444
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=7.8e-15 Score=131.05 Aligned_cols=279 Identities=12% Similarity=-0.014 Sum_probs=197.5
Q ss_pred EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL 156 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~ 156 (515)
+......+.+++++++|++.++...++.|.+||.. +.........+...+.++++.+++..+++...++.|..+|.. +
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 33456789999999999977776678899999988 444333333344678999999998766666667889999987 5
Q ss_pred ceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 157 NELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 157 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
+. ..+.. ....+..+++.++++.+++...++.|..++.. ++............+..+++.++++..++...++.|.
T Consensus 93 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred Ce-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 54 33332 33567899999999877777668899999988 6654332233456789999999999777666678899
Q ss_pred EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEEEEEEcCCCcEEEEE
Q psy17610 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITC 312 (515)
Q Consensus 235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 312 (515)
.++.. .... ......+...+..++++++++..++....+.|..+|. +++...... ....+.++++.++++..++.
T Consensus 171 ~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 171 RITNT-GKLE-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EECTT-CCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EECCC-CcEE-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 99873 2222 2223344556889999999887766666778999998 444333221 12458899999999876666
Q ss_pred ECCCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 313 STNKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 313 ~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
..++.|..+|. +++.. .+... ....+.++++.++|++.++.. . .|..+|.
T Consensus 248 ~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 248 WGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred cCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 66789999998 45433 33222 225678899999998666555 4 6766665
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.78 E-value=6.8e-15 Score=134.29 Aligned_cols=241 Identities=7% Similarity=-0.048 Sum_probs=172.2
Q ss_pred EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610 86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNFSSVFATCS--KND 147 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~~~~~--d~~ 147 (515)
.+++||||++|+++. .++.|.+||..+.+....+..+ +...-..++|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999986 3578999999886555444322 0123458999999999999875 578
Q ss_pred EEEEeCCCCceeEE-EEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecC----CCCCC-eEEEEEcCC
Q psy17610 148 IRIWSVRTLNELLR-ISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPN----AHNRG-VTALAITQD 220 (515)
Q Consensus 148 i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~----~~~~~-v~~~~~~~~ 220 (515)
|.++| .+++.+.. +.... ++.+.|++ +.+++.+.||.+.+++. +++....... ....+ .....+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99988777 54322 24455665 45566778999999999 8776643210 11112 223456666
Q ss_pred CCEEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC----------CCcEEEE
Q psy17610 221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST----------DGTCVLW 280 (515)
Q Consensus 221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw 280 (515)
+..++..+..+.+.+.|+..........+.- .......+.++|+++.++.+.. ++.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 6555555577889999985433222222211 1122445788999998887653 3579999
Q ss_pred EcccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEE
Q psy17610 281 DLIKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~ 332 (515)
|..+.+.+..+........++|+||++ .++++. .++.|.++|+.+++.+..+
T Consensus 304 D~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 304 TGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 999999999998888899999999999 677776 4899999999999998884
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=3.7e-17 Score=163.56 Aligned_cols=274 Identities=10% Similarity=0.015 Sum_probs=187.3
Q ss_pred CCCCcEEEEEecCC---cEEEEe--CCCCceeEEEE------ecCeEEEEEEEeeCCCEEEEE-----eCCCeEEEEecC
Q psy17610 133 PVNFSSVFATCSKN---DIRIWS--VRTLNELLRIS------VMNMICACIVFTYDGKAILSG-----WNDGFIRCFTPQ 196 (515)
Q Consensus 133 ~~~~~~l~~~~~d~---~i~iw~--~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~-----~~dg~i~~~~~~ 196 (515)
+|+|++++....++ .-.+|- ...++....+. +|...+..++|||||++|+.+ +.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47888888777643 344454 43444322222 234478999999999999843 334689999999
Q ss_pred CCceEEEecCCCCCCe--EEEEEcCCCCEEEEecCCCc-------------EEEEEccCCce--eeEEeeccccCceEEE
Q psy17610 197 SGKLKFIIPNAHNRGV--TALAITQDGTRLLSGGGEGQ-------------VRIWKLTRESQ--SLQCVLKEHTSSVSVI 259 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------------i~iw~~~~~~~--~~~~~~~~~~~~v~~~ 259 (515)
+++... ..+...+ ..++|+|||+.|+.++.|.. |++|++.+... ..+.....+...+..+
T Consensus 156 tg~~~~---~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 156 SGEWSK---VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TCCBCS---SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCcC---CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 988641 1121222 67899999999999888765 99999965543 2333444556678899
Q ss_pred EEecCCCEEEEEeCCC----cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCce--E
Q psy17610 260 QIKSDSKEAMSASTDG----TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGSI--I 329 (515)
Q Consensus 260 ~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~~--~ 329 (515)
.|+|||++++..+.++ .|.+|+..+++...............+ +++. ++..+. ++.|.+||+.+++. .
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 9999999998887666 677777665555444444445555555 5666 555443 57899999987653 2
Q ss_pred EEEecCC-CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeeccCC-CCCeeEEEECCCCcEEEEEe----CCCc
Q psy17610 330 RSLEGSD-VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGIGH-AASITKIKISPDKKVIVSVS----ADGG 402 (515)
Q Consensus 330 ~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~----~dg~ 402 (515)
..+..+. ...+..++++ ++.++++...|+..++|.+. +++....+..+ ...+..++++|+++.++... ..++
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 3333332 3567888888 67888888999988888665 35555555544 66788899999987776333 3478
Q ss_pred EEEEeCCCCc
Q psy17610 403 IFLWTFPELE 412 (515)
Q Consensus 403 i~iw~~~~~~ 412 (515)
|++||+.+.+
T Consensus 390 v~~~d~~~g~ 399 (695)
T 2bkl_A 390 IYKTSVSTGK 399 (695)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 9999987654
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=2.6e-17 Score=164.67 Aligned_cols=274 Identities=12% Similarity=0.027 Sum_probs=184.2
Q ss_pred ecCCCEEEEEecCc-----eEEEEECCCCceeEEee------ccCccCeEEEEeCCCCcEEEEEec-----CCcEEEEeC
Q psy17610 90 NPVNNKVFVGTVNC-----EIFLIDMNSGFTLTLVN------TCHTSAIYDLQFPVNFSSVFATCS-----KNDIRIWSV 153 (515)
Q Consensus 90 s~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~ 153 (515)
+|+|++++....++ .|++.+...+.. ..++ .+|...+..++|||||++|+.+.. +..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQE-KVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCC-EEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCc-EEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 37899888776543 355666555433 2232 245567999999999999986543 357999999
Q ss_pred CCCcee-EEEEecCeEEEEEEEeeCCCEEEEEeCCCe-------------EEEEecCCCce--EEEec-CCCCCCeEEEE
Q psy17610 154 RTLNEL-LRISVMNMICACIVFTYDGKAILSGWNDGF-------------IRCFTPQSGKL--KFIIP-NAHNRGVTALA 216 (515)
Q Consensus 154 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~~~~~~~~~~--~~~~~-~~~~~~v~~~~ 216 (515)
.+++.+ .. .........++|+|||+.|+.++.+.. |++|++.+++. ...+. ..+...+..+.
T Consensus 155 ~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 155 DSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 998865 21 111111157899999999999988765 99999998762 22221 34556789999
Q ss_pred EcCCCCEEEEecCCC----cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC----CCcEEEEEcccceE-
Q psy17610 217 ITQDGTRLLSGGGEG----QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST----DGTCVLWDLIKSTR- 287 (515)
Q Consensus 217 ~~~~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~- 287 (515)
|+|+|++|+..+.++ .|.+++.. .... ..+..+...+....+ +++. ++..+. ++.|.+||+.++..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~--~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPG--EKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTT--CSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCC--CCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc
Confidence 999999998877665 56666542 2222 233445555566556 5666 554443 57899999977642
Q ss_pred --EEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEEc----CC
Q psy17610 288 --LIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG----AD 358 (515)
Q Consensus 288 --~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d 358 (515)
...+.. ...+..++++ ++..+++...++..++|... +++....+..+....+..++++|+++.++... ..
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P 387 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP 387 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred CCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence 333333 2357778887 67778888888887777554 45566666655446778889999998777333 34
Q ss_pred CeEEEEEccCCee
Q psy17610 359 QIVKMWMYREGVP 371 (515)
Q Consensus 359 g~i~i~d~~~~~~ 371 (515)
+.|++||+.+++.
T Consensus 388 ~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 388 RQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEETTTCCE
T ss_pred CEEEEEECCCCcE
Confidence 7899999988753
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=1.6e-15 Score=132.56 Aligned_cols=214 Identities=12% Similarity=0.046 Sum_probs=168.8
Q ss_pred CCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEE
Q psy17610 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN 341 (515)
Q Consensus 264 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~ 341 (515)
.++.+++++.++.|.+||.++++.+..+..+. .+.++.+.|+++.++ +.++.+..||. +++.+.++..+....+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 45788999999999999999999999988764 688999999999888 45788999999 89999999876445788
Q ss_pred EEEEcCCCCEEEEEcC-CCeEEEEEccCCeeeeecc------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCc
Q psy17610 342 CVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCFVGI------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD 414 (515)
Q Consensus 342 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 414 (515)
++.+.++|+++++.+. ++.+..+|. +++.+..+. .+......+++.++++++++...++.|..||.. ++..
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 9999999999999887 778888886 666665543 222345667889999999999999999999976 4311
Q ss_pred cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc-----cceEEE
Q psy17610 415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-----VAAVNC 489 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~v~~ 489 (515)
.. ......+..+...++|+.++++..++.|..+|..+|+.+.++.... ...+..
T Consensus 159 w~---------------------~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~ 217 (276)
T 3no2_A 159 NS---------------------VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ 217 (276)
T ss_dssp EE---------------------EECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEE
T ss_pred EE---------------------EECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccccccc
Confidence 00 0001224456778999999999988899999999999988886432 133788
Q ss_pred EEEcCCCcEEEEee
Q psy17610 490 VDFVDDGKYFLTGG 503 (515)
Q Consensus 490 ~~~s~~~~~l~s~~ 503 (515)
++..++|+.+++..
T Consensus 218 ~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 218 LFPLQNGGLYICNW 231 (276)
T ss_dssp EEECTTSCEEEEEE
T ss_pred ceEcCCCCEEEEec
Confidence 99999999888763
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.76 E-value=3.3e-15 Score=136.68 Aligned_cols=243 Identities=10% Similarity=0.018 Sum_probs=176.2
Q ss_pred EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610 86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNFSSVFATCS--KND 147 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~~~~~--d~~ 147 (515)
.++++|||++|+++. .++.|.++|..+++....+..+ .......++|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999998876 3678999999997655554322 1123467899999999999874 578
Q ss_pred EEEEeCCCCceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCC-eEEEEEcCCCC
Q psy17610 148 IRIWSVRTLNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRG-VTALAITQDGT 222 (515)
Q Consensus 148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~-v~~~~~~~~~~ 222 (515)
|.+.|+.+++.+.++..... ....|++ ..+++.+.||.+.+.+..+++..... ......+ ...+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 99999999999888875432 2334443 55666777888888887666554321 0111111 12356788888
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC----------CCcEEEEEc
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST----------DGTCVLWDL 282 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~ 282 (515)
.++..+..+.+.+.|...........+.- .......++++|++++++.... ++.|.+.|.
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 88777788999999985433222211110 1122234689999988777642 357999999
Q ss_pred ccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEE
Q psy17610 283 IKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~ 332 (515)
.+.+.+..+........++++|+++ ++++.. .++.|.++|+.+++.+.++
T Consensus 358 ~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999998888899999999999 888888 5899999999999999987
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=3.6e-14 Score=126.68 Aligned_cols=275 Identities=11% Similarity=0.015 Sum_probs=195.1
Q ss_pred CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200 (515)
Q Consensus 123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 200 (515)
....+.++++.++|...++...++.|.+||.. ++.. .+.. ....+..+++.++++..++...++.|..+|.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 45578899999999877766678999999987 5443 3332 23567899999999877776667899999988 655
Q ss_pred EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW 280 (515)
Q Consensus 201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 280 (515)
...........+..+++.++++++++...++.|..++.. .... ...+......+..+++.++++..++...++.|..+
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 432222244678999999999988877777889999875 2222 22233345678899999999966666667889999
Q ss_pred EcccceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610 281 DLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357 (515)
Q Consensus 281 d~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 357 (515)
|. +++... +.. ...+..+++.+++...++....+.|..+|. +++............+.+++++++|++.++...
T Consensus 173 ~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 173 TN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp CT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 98 554443 332 235889999999987777667788999998 555443322222366889999999997777767
Q ss_pred CCeEEEEEccCCeee-eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 358 DQIVKMWMYREGVPC-FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 358 dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
++.|..|+. +++.. ..+......+.++++++++++.++.. . .|..++.
T Consensus 250 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 789999998 44332 22333456689999999998666554 4 6666654
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.75 E-value=2.3e-15 Score=137.70 Aligned_cols=275 Identities=12% Similarity=0.094 Sum_probs=195.2
Q ss_pred cCCCEEEEEecC-----ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEEeCCC
Q psy17610 91 PVNNKVFVGTVN-----CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIWSVRT 155 (515)
Q Consensus 91 ~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~ 155 (515)
|+++++++.... +.|.++|..+++.+..+..+ ..+ .++++||+++++++. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 477777776552 69999999997666555443 344 899999999998887 367899999999
Q ss_pred CceeEEEEec-------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-CCEEE
Q psy17610 156 LNELLRISVM-------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-GTRLL 225 (515)
Q Consensus 156 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 225 (515)
++.+.++... ......+.|+|||++++++.. ++.|.+.|+.+++.+..+..+.. ....|+ .+.++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----~~~~p~g~~~~v 233 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----YHIFPASPTVFY 233 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEEETTEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----eeeccCCCcEEE
Confidence 9998888643 122356899999999998874 57899999999999888754321 223332 24555
Q ss_pred EecCCCcEEEEEccCCceeeE--EeeccccCce-EEEEEecCCCEEEEEeCCCcEEEEEcccceEEE--EEEc-------
Q psy17610 226 SGGGEGQVRIWKLTRESQSLQ--CVLKEHTSSV-SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI--IMIL------- 293 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~------- 293 (515)
+.+.||.+.+.+....+.... ..+.....++ ..+.+.+++..++.....+.+.+.|........ .+..
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 566677777777632211110 0111111121 235678898888888888999999986544321 1111
Q ss_pred ----CccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEc-C
Q psy17610 294 ----PSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGG-A 357 (515)
Q Consensus 294 ----~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~ 357 (515)
+.....++++|+++++++... .+.|.++|+.+.+.+.++... .....++|+|||+ ++++.. .
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCC
Confidence 111223689999988877643 357999999999999999865 4678999999999 888887 5
Q ss_pred CCeEEEEEccCCeeeeec
Q psy17610 358 DQIVKMWMYREGVPCFVG 375 (515)
Q Consensus 358 dg~i~i~d~~~~~~~~~~ 375 (515)
++.|.++|..+++.+.++
T Consensus 392 s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 899999999999998876
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=3e-15 Score=150.73 Aligned_cols=277 Identities=9% Similarity=-0.005 Sum_probs=181.6
Q ss_pred ecCCCEEEEEecCc-----eEEEEECC---CCceeEEe------eccCccCeEEEEeCCCCcEEEEEecC-----CcEEE
Q psy17610 90 NPVNNKVFVGTVNC-----EIFLIDMN---SGFTLTLV------NTCHTSAIYDLQFPVNFSSVFATCSK-----NDIRI 150 (515)
Q Consensus 90 s~~~~~l~~~~~d~-----~i~iw~~~---~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 150 (515)
+|+|++++....++ .|++.+.. .+. ...+ ..+|...+..++|||||++|+.+..+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK-GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC-CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC-CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 38999988776543 34455544 332 2322 22344468899999999999888763 35999
Q ss_pred EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe--------------EEEEecCCCce--EEEec-CCCCCCeE
Q psy17610 151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGF--------------IRCFTPQSGKL--KFIIP-NAHNRGVT 213 (515)
Q Consensus 151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~~~~~~~~~~--~~~~~-~~~~~~v~ 213 (515)
||+.+++.+.. ..+...+..++|+|| +.|+.++.++. |++|++.++.. ...+. ..+...+.
T Consensus 194 ~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 194 VGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp EETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred EECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 99999887543 222222357899999 99998876553 88999987752 22221 22334588
Q ss_pred EEEEcCCCCEEEEecCCC-----cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC----CcEEEEEccc
Q psy17610 214 ALAITQDGTRLLSGGGEG-----QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD----GTCVLWDLIK 284 (515)
Q Consensus 214 ~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~ 284 (515)
.+.|+|||++|+..+.++ .|.+||+..........+..+...+... ++|+++.|+..+.+ +.|.+||+.+
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999999999988776543 8999998654222022333444444444 35889988887764 4599999987
Q ss_pred c--eEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEE----c
Q psy17610 285 S--TRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG----G 356 (515)
Q Consensus 285 ~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~ 356 (515)
+ .....+.... .+..+.+. ++..+++...++..++|... +++....+..+....+..+.++|+++.++.. .
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 4 3333333332 45566776 55667777788876666443 4566666665444778899999998866633 2
Q ss_pred CCCeEEEEEccCCee
Q psy17610 357 ADQIVKMWMYREGVP 371 (515)
Q Consensus 357 ~dg~i~i~d~~~~~~ 371 (515)
..+.+++||+.+++.
T Consensus 430 ~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 430 QPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCcE
Confidence 347899999988763
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=7.7e-16 Score=135.29 Aligned_cols=240 Identities=7% Similarity=-0.017 Sum_probs=169.7
Q ss_pred cEEEEEEecCCCEEE-EEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 83 GISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 83 ~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
...+++++|+|++++ +...++.|.+|+..++. .......+...+.++++++++..+++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc-cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 788999999999666 44677899999987643 2222233445688999999987555444 88999999876543 33
Q ss_pred EE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610 162 IS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR 240 (515)
Q Consensus 162 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 240 (515)
+. .....+..++++++|+.+++...++.|.+|+..+....... ......+..++++++|+.+++...++.|.+|+...
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 32 22245789999999997777777889999987665544322 23334678899999999777777788999999854
Q ss_pred CceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610 241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMID 319 (515)
Q Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~ 319 (515)
.. .......+...+..++++++|..+++...++.|.+|+............ ...+.+++++++++.+++...++.|+
T Consensus 181 ~~--~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 181 NN--QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CC--EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred Cc--eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 32 2222223336678999999997777777788999999876543332212 24688999999999888888899999
Q ss_pred EEeCCCCce
Q psy17610 320 YWETCDGSI 328 (515)
Q Consensus 320 ~~d~~~~~~ 328 (515)
++++...+.
T Consensus 259 ~~~~~~~~~ 267 (270)
T 1rwi_B 259 KLTSLEHHH 267 (270)
T ss_dssp EECCCGGGS
T ss_pred EEcCCCccc
Confidence 999876543
No 205
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=1.6e-15 Score=133.25 Aligned_cols=240 Identities=11% Similarity=0.024 Sum_probs=170.3
Q ss_pred EEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610 168 ICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ 246 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 246 (515)
...+++++++++.++ +...++.|.+|+..++.... +...+...+.+++++++|+.+++.. ++.|.+||...... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--T 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--e
Confidence 457889999998666 44678899999976655432 2233445678999999998666655 88999999753322 1
Q ss_pred EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610 247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~ 325 (515)
.........+..++++++++.+++...++.|.+|+..+........ ....+..++++++++.+++...++.|.+||...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 1111233568899999999877777778899999866544332211 123577899999998777766788999999877
Q ss_pred CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610 326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL 405 (515)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 405 (515)
........... ..+..++++++|.++++...++.|.+|+............+...+.+++++++++++++...++.|++
T Consensus 181 ~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 181 NNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp CCEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CceEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEE
Confidence 66543322222 56789999999988888777889999998765443333334467899999999998888888999999
Q ss_pred EeCCCCc
Q psy17610 406 WTFPELE 412 (515)
Q Consensus 406 w~~~~~~ 412 (515)
+++...+
T Consensus 260 ~~~~~~~ 266 (270)
T 1rwi_B 260 LTSLEHH 266 (270)
T ss_dssp ECCCGGG
T ss_pred EcCCCcc
Confidence 9987543
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.73 E-value=1.5e-15 Score=152.97 Aligned_cols=275 Identities=12% Similarity=0.010 Sum_probs=182.5
Q ss_pred CCCCcEEEEEecCCc---EEEEeCCC----CceeEEE-------EecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEE
Q psy17610 133 PVNFSSVFATCSKND---IRIWSVRT----LNELLRI-------SVMNMICACIVFTYDGKAILSGWND-----GFIRCF 193 (515)
Q Consensus 133 ~~~~~~l~~~~~d~~---i~iw~~~~----~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~ 193 (515)
+|+|++++....++. -.+|.... +.....+ .++...+..++|||||++|+.+..+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998888776432 55565432 2223332 1223468899999999999877654 369999
Q ss_pred ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc--------------EEEEEccCCcee--eEEeeccccCceE
Q psy17610 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ--------------VRIWKLTRESQS--LQCVLKEHTSSVS 257 (515)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~iw~~~~~~~~--~~~~~~~~~~~v~ 257 (515)
|+.+++..... .+...+..++|+|| +.|+.++.++. |++|++.+.... .+.....+...+.
T Consensus 195 dl~tg~~~~~~--~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKPLADE--LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp ETTTCCEEEEE--EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred ECCCCCCCCcc--CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 99999876542 12222357899999 98888876554 888998544322 2322333444588
Q ss_pred EEEEecCCCEEEEEeCCC-----cEEEEEcccc--e-EEEEEEcCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCC
Q psy17610 258 VIQIKSDSKEAMSASTDG-----TCVLWDLIKS--T-RLIIMILPSMIMSAAYHPSEVQLITCST----NKMIDYWETCD 325 (515)
Q Consensus 258 ~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~ 325 (515)
.+.|+|||++++..+.++ .|.+||+.++ + .............. +.|+++.|+..+. ++.|.+||+.+
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999999999988877544 8999999876 3 23333333333333 3488988888776 45699999987
Q ss_pred C-ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeeccC-CCCCeeEEEECCCCcEEEEE-e---
Q psy17610 326 G-SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGIG-HAASITKIKISPDKKVIVSV-S--- 398 (515)
Q Consensus 326 ~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~--- 398 (515)
+ .....+..+....+..++++ ++.++++...|+..+||.+. ++.....+.. +...+..++++|+++.|+.. +
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 5 24444444443567777887 56778888889887777654 4555555543 46778899999998766533 2
Q ss_pred CCCcEEEEeCCCCc
Q psy17610 399 ADGGIFLWTFPELE 412 (515)
Q Consensus 399 ~dg~i~iw~~~~~~ 412 (515)
..+++.+||+.+.+
T Consensus 430 ~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 430 QPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEEEETTTTE
T ss_pred CCCEEEEEECCCCc
Confidence 34789999987654
No 207
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.72 E-value=7.8e-12 Score=127.10 Aligned_cols=398 Identities=10% Similarity=0.070 Sum_probs=250.6
Q ss_pred EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS 163 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 163 (515)
|.++...++++ |.+++.++-|..|+.+++.........+...|.++...+++. +.+++.++.+..||..+++.. .+.
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~-~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIK-NYL 251 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEE-EEC
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEE-Eee
Confidence 88998888876 445666556999998774322211122356788898888874 555555555889998765433 232
Q ss_pred e--------cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEEEecC
Q psy17610 164 V--------MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 164 ~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~ 229 (515)
. ....|.++...++|. |..|+.+| |.+|+..+++....... -....|.++...++|. |..|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNR-LWIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSC-EEEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCC-EEEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 1 135689998888887 44555554 88999887765443211 1235699999999887 555777
Q ss_pred CCcEEEEEccCCceeeEEeec----cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE---------cCcc
Q psy17610 230 EGQVRIWKLTRESQSLQCVLK----EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI---------LPSM 296 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~ 296 (515)
++-|..|+............. -....|.++...+++. +..|+.++-|..|+..+++...... ....
T Consensus 329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNN 407 (795)
T ss_dssp SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSC
T ss_pred CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCcc
Confidence 777999987433222111111 1234688888887766 5667777779999987665433221 1246
Q ss_pred EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec----CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee
Q psy17610 297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC 372 (515)
Q Consensus 297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 372 (515)
+.++...++++.+.+|+.++-+..+|..+++... +.. .....|.++...++|++.+.. .+ -+.+||..+++..
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFT 484 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEE
Confidence 8889888888856677777789999988776433 321 122578899998888855544 44 4888998776543
Q ss_pred eecc------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEE
Q psy17610 373 FVGI------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS 446 (515)
Q Consensus 373 ~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 446 (515)
.... .....|.++...+++++.+.. . +.+..|+...... . .. ... .........|.+
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-~-----~~----~~~-----~~~~l~~~~i~~ 547 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-Q-----KA----SIL-----PVSNVTKLFTNC 547 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE-E-----EC----CCS-----CSCGGGGSCEEE
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE-E-----Ee----cCC-----CCCCCCCCeeEE
Confidence 3221 123678999999999866654 4 4588888654321 0 00 000 000012345888
Q ss_pred eeeccCCcEEEEeecCCeEEEEecCCCeeeeee--cccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 447 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 447 ~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
+...++|.+.+... . -+..||..+++...-- .+.....|.++...++|++.+++ .+| |..|+
T Consensus 548 i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~G-l~~~~ 611 (795)
T 4a2l_A 548 IYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-NRG-ISCFN 611 (795)
T ss_dssp EEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-TTE-EEEEE
T ss_pred EEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-CCc-eEEEc
Confidence 99999998665443 3 4888998776543321 22223568999999999876654 455 44443
No 208
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.71 E-value=4.7e-12 Score=128.72 Aligned_cols=398 Identities=8% Similarity=0.023 Sum_probs=248.1
Q ss_pred EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccC-ccC-eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TSA-IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
|.++...++|++.+ ++. +.|..||.+++ .......++ ... |.++...+++ .+.+++.++.+..|+..+++....
T Consensus 133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g-~lwigt~~~Gl~~~~~~~~~~~~~ 208 (795)
T 4a2l_A 133 VNGIEEISPEQLLI-STP-EGLIMFDIKES-KFIDDSFSTAMHKTIASTLYRQGD-QIYIGTSTDGLYTYSITQKTFEKV 208 (795)
T ss_dssp CCEEEEEETTEEEE-EET-TEEEEEETTTT-EEECSSSCHHHHTCCEEEEEEETT-EEEEEESSSCEEEEETTTCCEEEC
T ss_pred EEEEEECCCCCEEE-EEC-CceEEEECCCC-EEEeccCCCCCCcceEEEEECCCC-CEEEEECCCCEEEEeCCCCeEEEe
Confidence 88999888887554 455 45899998774 332222111 123 8888888887 455566655688999877654322
Q ss_pred E-EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610 162 I-SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLLSGGGEGQVR 234 (515)
Q Consensus 162 ~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 234 (515)
. ......|.++...+++. |..++.++-+..||..+++....... .....|.++...++|.+.+ |+.+ -|.
T Consensus 209 ~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~ 285 (795)
T 4a2l_A 209 IPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLN 285 (795)
T ss_dssp C----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEE
T ss_pred cCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhh
Confidence 1 12345688888888776 44555444488999887765443211 1235699999998887554 5555 588
Q ss_pred EEEccCCceeeEEee-----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-------cCccEEEEEE
Q psy17610 235 IWKLTRESQSLQCVL-----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-------LPSMIMSAAY 302 (515)
Q Consensus 235 iw~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~ 302 (515)
+|+............ .-....|.++...++|. +..|+.++-|..++..+........ ....|.++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence 898753322211110 01235689998888876 5667777779999876654322211 1235888988
Q ss_pred cCCCcEEEEEECCCeEEEEeCCCCceEEEEec-------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610 303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG 375 (515)
Q Consensus 303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 375 (515)
.+++... +|+.++-+..|+..+++...-... -....|.++...++|+.|.+|+.++-+..+|..+++.....
T Consensus 365 d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 365 DKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp CTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred CCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 8887755 467777799999877654332211 11257889999888885677777777999998876543322
Q ss_pred c----CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610 376 I----GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP 451 (515)
Q Consensus 376 ~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 451 (515)
. .....|.++...+++++.+.. . +.+.+|+..+......... . .........|.++...+
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~------------~--~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKE------------K--DGTPVVSKQITTLFRDS 507 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBC------------T--TCCBCCCCCEEEEEECT
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccc------------c--cccccCCceEEEEEECC
Confidence 1 234679999999888866544 4 4588888755321100000 0 00001124588898998
Q ss_pred CCcEEEEeecCCeEEEEecCCCeeeeeec------ccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 452 SEVQLITCSTNKMIDYWETCDGSIIRSLE------GSDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
+|++.+... +-+..||..+++. .+. +.....|.++...++|++.++.. .| +..||
T Consensus 508 ~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d 568 (795)
T 4a2l_A 508 HKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCFN 568 (795)
T ss_dssp TCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SC-EEEEE
T ss_pred CCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeEC
Confidence 888666544 4588999877765 222 11225799999999998665443 45 55554
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.67 E-value=1.2e-13 Score=124.19 Aligned_cols=240 Identities=12% Similarity=0.109 Sum_probs=166.6
Q ss_pred EEEEEEEeeCCCEEEE-------EeCCCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCC-CCEEEEecCCCcEEEE
Q psy17610 168 ICACIVFTYDGKAILS-------GWNDGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQD-GTRLLSGGGEGQVRIW 236 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~-------~~~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw 236 (515)
...+++|++++..+++ ...++.|..||..+++...... .++...+..++++++ ++++++.. .+.|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEE
Confidence 3467899999987777 5678899999988887654321 124567899999999 76555444 4478899
Q ss_pred EccCCceeeE-Eee-c-cccCceEEEEEecCCCEEEEEeCC---------------CcEEEEEcccceEEEEEEcCccEE
Q psy17610 237 KLTRESQSLQ-CVL-K-EHTSSVSVIQIKSDSKEAMSASTD---------------GTCVLWDLIKSTRLIIMILPSMIM 298 (515)
Q Consensus 237 ~~~~~~~~~~-~~~-~-~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~ 298 (515)
|.. ...... ... . .....+..++++++++.+++...+ +.|..++.. ++............
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPN 175 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcc
Confidence 985 332211 111 1 112457899999999887776654 567777765 54444333334567
Q ss_pred EEEEc----CCCcEEEEE-ECCCeEEEEeCC-CCce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 299 SAAYH----PSEVQLITC-STNKMIDYWETC-DGSI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 299 ~~~~~----~~~~~l~~~-~~~~~i~~~d~~-~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
.++++ |+++.++++ ..++.|.+||.. +++. ...+..+....+..++++++|+++++...++.|.+||.+
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 88999 999776655 457899999976 4432 111221110457789999999988887778899999998
Q ss_pred CCeeeeeccCCCCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCC
Q psy17610 368 EGVPCFVGIGHAASITKIKISPDKKVIV-SVSADGGIFLWTFPE 410 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~ 410 (515)
+++.+..+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus 256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7776666666667899999999999555 445568899998764
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=1.7e-13 Score=123.25 Aligned_cols=242 Identities=12% Similarity=0.111 Sum_probs=168.4
Q ss_pred cCCCcEEEEEEecCCCEEEE-------EecCceEEEEECCCCceeEEee---ccCccCeEEEEeCCC-CcEEEEEecCCc
Q psy17610 79 KDDSGISSLQYNPVNNKVFV-------GTVNCEIFLIDMNSGFTLTLVN---TCHTSAIYDLQFPVN-FSSVFATCSKND 147 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~---~~h~~~v~~~~~~~~-~~~l~~~~~d~~ 147 (515)
..-....+++|+++++++++ +..++.|.+||..+++...... .++...+.+++++++ + .+++++..+.
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~~~~ 93 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLG 93 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC-cEEEEECCCC
Confidence 34456789999999987777 5778899999988764432222 125567899999999 6 4555555557
Q ss_pred EEEEeCCCCceeEE-EEe----cCeEEEEEEEeeCCCEEEEEeCC---------------CeEEEEecCCCceEEEecCC
Q psy17610 148 IRIWSVRTLNELLR-ISV----MNMICACIVFTYDGKAILSGWND---------------GFIRCFTPQSGKLKFIIPNA 207 (515)
Q Consensus 148 i~iw~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~~~~~~~~~~~~~~~~~ 207 (515)
|.+||.+ ++.... ... ....+..++++++|+.+++...+ +.|..++.. ++..... .
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--~ 169 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD--T 169 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE--E
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec--c
Confidence 9999988 654322 111 12347889999999877776554 568888876 5544332 2
Q ss_pred CCCCeEEEEEc----CCCCEEEEe-cCCCcEEEEEccC-Ccee---eEEeecccc-CceEEEEEecCCCEEEEEeCCCcE
Q psy17610 208 HNRGVTALAIT----QDGTRLLSG-GGEGQVRIWKLTR-ESQS---LQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTC 277 (515)
Q Consensus 208 ~~~~v~~~~~~----~~~~~l~~~-~~d~~i~iw~~~~-~~~~---~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i 277 (515)
+......++++ |+++.++.+ ..++.|.+|+... .... ....+..+. ..+..++++++|+.+++...++.|
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 33456889999 998765544 5678999999752 2111 222233333 567889999999888887788899
Q ss_pred EEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCC
Q psy17610 278 VLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCS-TNKMIDYWETCD 325 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~ 325 (515)
.+||..+++....+..+ ..+.+++++|+++.|++++ .++.|..|++..
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999866665555555 5789999999999665554 567898888764
No 211
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.64 E-value=5.5e-13 Score=123.08 Aligned_cols=302 Identities=11% Similarity=0.081 Sum_probs=197.3
Q ss_pred CCCEEEEEecCceEEEEECCCCceeEEeeccC--------ccCeEE-EEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610 92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH--------TSAIYD-LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162 (515)
Q Consensus 92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h--------~~~v~~-~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 162 (515)
.+..+++++.++.|..+|.++|+.+-...... ...+.+ +.. ++..+++++.++.|..+|.++|+.+.+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 46778888889999999999987664433211 122322 222 3458888888999999999999998877
Q ss_pred EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC----eEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610 163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG----VTALAITQDGTRLLSGGGEGQVRIWKL 238 (515)
Q Consensus 163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~iw~~ 238 (515)
............ .+..+++++.++.+..+|.++|+.+.......... ....... +..++.+..++.+..+|.
T Consensus 130 ~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 130 KVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp ECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred eCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 654332222222 24578888899999999999999887763221100 0111222 456788888999999998
Q ss_pred cCCceeeEEeeccccCc--------eEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE
Q psy17610 239 TRESQSLQCVLKEHTSS--------VSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI 310 (515)
Q Consensus 239 ~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (515)
.+.+............. +..... ..+..++.++.++.+..+|..+++.+....... ...+.. ++..++
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~ 281 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPV-VVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIY 281 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCE-EETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcE-EECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEE
Confidence 65443333222211000 100001 124677888889999999999998887665443 233333 467788
Q ss_pred EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE-EEECC
Q psy17610 311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK-IKISP 389 (515)
Q Consensus 311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~-~~~~~ 389 (515)
+++.++.+..+|..+++.+................ .+..|++++.+|.+..+|..+++.+.........+.. ...
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-- 357 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-- 357 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--
Confidence 88899999999999999887776322122222223 2467888899999999999999888776543333322 222
Q ss_pred CCcEEEEEeCCCcEEEEe
Q psy17610 390 DKKVIVSVSADGGIFLWT 407 (515)
Q Consensus 390 ~~~~l~~~~~dg~i~iw~ 407 (515)
.+..|+.++.+|.+..|+
T Consensus 358 ~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 358 ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ETTEEEEEBTTSCEEEEE
T ss_pred ECCEEEEEeCCCEEEEEe
Confidence 245678888999999886
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.64 E-value=1.4e-12 Score=115.83 Aligned_cols=235 Identities=9% Similarity=0.010 Sum_probs=157.3
Q ss_pred ccCceEEEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610 252 HTSSVSVIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR 330 (515)
Q Consensus 252 ~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~ 330 (515)
...-.....|++++.. +++...++.|..||..+++. ..+..+..+.+++++++++++++ . ++.|.+||..+++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 3445567889996554 55555678999999987765 45566778999999999995554 3 5689999998876543
Q ss_pred EEecC---CCccEEEEEEcCCCCEEEEEcC---------CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE-
Q psy17610 331 SLEGS---DVAAVNCVDFVDDGKYFLTGGA---------DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV- 397 (515)
Q Consensus 331 ~~~~~---~~~~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~- 397 (515)
..... ....++.++++|+|+++++... ...-.+|.+........+..+....+.++|+|+++.|+.+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEec
Confidence 33321 2246889999999997765422 1223455443322222233344556889999999877554
Q ss_pred eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee
Q psy17610 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR 477 (515)
Q Consensus 398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 477 (515)
+.++.|.+|++....... ... ............+..++++++|++.++....+.|..||..+++.+.
T Consensus 168 ~~~~~i~~~~~d~~~G~~------~~~-------~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQI------SNR-------RSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp GGGTEEEEEEECTTTCCE------EEE-------EEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred CCCCcEEEEeccCCCCcc------cCc-------EEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 557889999874211100 000 0000001122457789999999888887778899999999999998
Q ss_pred eecccccceEEEEEEc-CCCcEEEEee
Q psy17610 478 SLEGSDVAAVNCVDFV-DDGKYFLTGG 503 (515)
Q Consensus 478 ~~~~~~~~~v~~~~~s-~~~~~l~s~~ 503 (515)
.+..+. ..+++++|. ||++.|..++
T Consensus 235 ~i~~p~-~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 235 TVKLPV-DKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEECSS-SBEEEEEEESGGGCEEEEEE
T ss_pred EEECCC-CCceEEEEeCCCCCEEEEEc
Confidence 888765 689999998 8887665544
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=6.1e-13 Score=123.23 Aligned_cols=235 Identities=9% Similarity=-0.041 Sum_probs=165.6
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--cEEEEeCCCCcee
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--DIRIWSVRTLNEL 159 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~ 159 (515)
.....|+|+|+++++++...++.|++||.+++ .+..+...... .. ++|+|+++.|+++..++ .|.+++...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-KVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT-EEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC-EEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 46889999999997777777789999999985 44444333222 33 99999999999888865 7888888766554
Q ss_pred EEEE---e-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCCe--EEEEEcCC-CCEEEEecC
Q psy17610 160 LRIS---V-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRGV--TALAITQD-GTRLLSGGG 229 (515)
Q Consensus 160 ~~~~---~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~v--~~~~~~~~-~~~l~~~~~ 229 (515)
..+. . ....+.+++++|++..|+++..++.|..||..++...... ..++...- ..++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 4441 1 3345678999995556666777889999999877643320 12222222 39999995 666666667
Q ss_pred CCcEEEEEccCCceeeEEeeccc---------------cCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc
Q psy17610 230 EGQVRIWKLTRESQSLQCVLKEH---------------TSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL 293 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~ 293 (515)
++.|+.|+.+.. ...+.++ -.....++++++++++++-. .++.|+.|++.++........
T Consensus 288 ~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 288 LSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence 889999987532 1122222 13478899999999777777 788999999877765544433
Q ss_pred ---------------CccEEEEEEcCCCcEEEEEECCCeEEEEeC
Q psy17610 294 ---------------PSMIMSAAYHPSEVQLITCSTNKMIDYWET 323 (515)
Q Consensus 294 ---------------~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~ 323 (515)
-.....+++++++.++++-..++.|+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 134789999999887777777888887764
No 214
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.1e-10 Score=116.32 Aligned_cols=394 Identities=9% Similarity=0.002 Sum_probs=239.6
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc-------CccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-------HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
..|.++...++|. |.+|+.++-|..||..++. ....... ....|.++...+++...+ ++.+ -+.+||..
T Consensus 163 ~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~ 238 (781)
T 3v9f_A 163 EQTWTATEAEDGK-LYIGHVEGGLSILSLNDKS-VKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNAN 238 (781)
T ss_dssp CCEEEEEEEETTE-EEEEETTTEEEEEETTTTE-EEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred cceEEEEECCCCC-EEEEecCCCeEEEcCCCCc-eEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCC
Confidence 5688988887776 5556666569999988743 3222110 135689999988875554 4444 68899987
Q ss_pred CCceeEEEE-------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec-------------CCCCCCeEE
Q psy17610 155 TLNELLRIS-------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-------------NAHNRGVTA 214 (515)
Q Consensus 155 ~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-------------~~~~~~v~~ 214 (515)
+++...-.. .....|.++...++|. |..|+..+-|.+++..+++...... ......|.+
T Consensus 239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~ 317 (781)
T 3v9f_A 239 TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARY 317 (781)
T ss_dssp TTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEE
T ss_pred CCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEE
Confidence 654322111 1235688888877775 5666664558889987765432211 123457999
Q ss_pred EEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610 215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287 (515)
Q Consensus 215 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 287 (515)
+...++|. |..|+.++-|..++............ .-....|.++...+++. +..|+.++-+..+|..++..
T Consensus 318 i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~ 395 (781)
T 3v9f_A 318 IFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVA 395 (781)
T ss_dssp EEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEE
T ss_pred EEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeE
Confidence 99998886 55577677788888753332221110 01235688888877765 55667666788999866543
Q ss_pred EEEE----EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec--CCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610 288 LIIM----ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGADQIV 361 (515)
Q Consensus 288 ~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i 361 (515)
.... .....+.++...+++...+ ++.++.+..+|..+++.. .+.. .....|.++...++|++.+ |+. +-+
T Consensus 396 ~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl 471 (781)
T 3v9f_A 396 IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGV 471 (781)
T ss_dssp ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEE
T ss_pred EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEE-EEC-Cce
Confidence 2211 1224688888887777555 666677889998776543 2221 1236788998888887544 454 458
Q ss_pred EEEEccCCeeeeeccCC-----CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccccccee
Q psy17610 362 KMWMYREGVPCFVGIGH-----AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLI 436 (515)
Q Consensus 362 ~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (515)
..+|..+++........ ...|.++...+++++.+ ++.++.+..|+........ ... .
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~---------~~~----~---- 533 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRK---------FNQ----Y---- 533 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEE---------ECT----T----
T ss_pred EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEE---------ccC----C----
Confidence 88998776443322111 46789999999888655 4454447778765432100 000 0
Q ss_pred eecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeee--ecccccceEEEEEEcCCCcEEEEeecCC
Q psy17610 437 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS--LEGSDVAAVNCVDFVDDGKYFLTGGADQ 506 (515)
Q Consensus 437 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg 506 (515)
.......|.++...++|.+.+.. .+|.+..||..+++...- ..+-....|.++...++|++.+++ .+|
T Consensus 534 ~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G 603 (781)
T 3v9f_A 534 EGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG 603 (781)
T ss_dssp TTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC
T ss_pred CCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc
Confidence 00122458888888888865544 467558899877653221 112222467889999889866654 555
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.62 E-value=3.1e-13 Score=133.67 Aligned_cols=261 Identities=13% Similarity=0.162 Sum_probs=178.7
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeecc-CccCeEEEEeCC---CCcEEEEEec------CCcEEEEeCCCCceeEEE
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPV---NFSSVFATCS------KNDIRIWSVRTLNELLRI 162 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~---~~~~l~~~~~------d~~i~iw~~~~~~~~~~~ 162 (515)
+..+++++.|+.|..+|.++|+.+-..... +......+..+| ++ .+++++. ++.|..||.++|+.+.++
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888999999999999999777655432 221111222233 44 5555543 688999999999999887
Q ss_pred EecC-------------------------------eEEEEEEEeeCCCEEEEEeCCCe-------------------EEE
Q psy17610 163 SVMN-------------------------------MICACIVFTYDGKAILSGWNDGF-------------------IRC 192 (515)
Q Consensus 163 ~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~~ 192 (515)
.... .....++++|++..++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 6210 01125788888889998887764 999
Q ss_pred EecCCCceEEEecCC-CC-------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeEEeecc----------
Q psy17610 193 FTPQSGKLKFIIPNA-HN-------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQCVLKE---------- 251 (515)
Q Consensus 193 ~~~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---------- 251 (515)
+|.++|+.+..+... |. .+........+|+ .++.++.+|.++++|..+.+......+..
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 999999998877433 21 1222222223554 78889999999999986544321111100
Q ss_pred ----------------ccC-----------ceEEEEEecCCCEEEEEeC-------------------------------
Q psy17610 252 ----------------HTS-----------SVSVIQIKSDSKEAMSAST------------------------------- 273 (515)
Q Consensus 252 ----------------~~~-----------~v~~~~~~~~~~~l~~~~~------------------------------- 273 (515)
... .-..++++|+..++++...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 000 0113678888887776532
Q ss_pred --------------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCcc
Q psy17610 274 --------------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA 339 (515)
Q Consensus 274 --------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 339 (515)
+|.|..||+.+++.+.....+.+.....+...+..++.++.|+.++.||.++++.+.++.......
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~ 519 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM 519 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc
Confidence 377999999999999888877665555666788899999999999999999999999998765333
Q ss_pred EEEEEEcCCCCEEEE
Q psy17610 340 VNCVDFVDDGKYFLT 354 (515)
Q Consensus 340 i~~~~~~~~~~~l~~ 354 (515)
..-+.|..+|+.+++
T Consensus 520 ~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 520 AAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCEEEEETTEEEEE
T ss_pred cCceEEEECCEEEEE
Confidence 345677778875443
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.62 E-value=3.9e-13 Score=132.71 Aligned_cols=313 Identities=12% Similarity=0.127 Sum_probs=212.1
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccCcc----------CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS----------AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 162 (515)
+..|++++.++.|+-+|..+|+.+-........ .-..+++ ++..+++++.|+.+..+|..+|+.+.++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 667888888899999999998776554322110 0012223 3568888899999999999999999988
Q ss_pred Eec-C----eEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCC---------------------
Q psy17610 163 SVM-N----MICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNR--------------------- 210 (515)
Q Consensus 163 ~~~-~----~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~--------------------- 210 (515)
... . ..+.+.-.. .+..+++++. ++.|+.+|.++|+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 754 2 112111111 2345665553 689999999999998776432111
Q ss_pred ----------CeEEEEEcCCCCEEEEecCCC-------------------cEEEEEccCCceeeEEeecccc-------C
Q psy17610 211 ----------GVTALAITQDGTRLLSGGGEG-------------------QVRIWKLTRESQSLQCVLKEHT-------S 254 (515)
Q Consensus 211 ----------~v~~~~~~~~~~~l~~~~~d~-------------------~i~iw~~~~~~~~~~~~~~~~~-------~ 254 (515)
....++++|++..++.+..++ .|..+|..+++.........|. .
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 113578889888888887664 4888888655444443333331 1
Q ss_pred ceEEEEEecCC---CEEEEEeCCCcEEEEEcccceEEEEEEcCc------------cE----------------------
Q psy17610 255 SVSVIQIKSDS---KEAMSASTDGTCVLWDLIKSTRLIIMILPS------------MI---------------------- 297 (515)
Q Consensus 255 ~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~---------------------- 297 (515)
....+....+| ..++.++.+|.++++|..+++.+....... ++
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~ 393 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH 393 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc
Confidence 22333444577 678899999999999999999887665321 01
Q ss_pred --EEEEEcCCCcEEEEEEC-------------------------------------------CCeEEEEeCCCCceEEEE
Q psy17610 298 --MSAAYHPSEVQLITCST-------------------------------------------NKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 298 --~~~~~~~~~~~l~~~~~-------------------------------------------~~~i~~~d~~~~~~~~~~ 332 (515)
..++++|+...+++... .+.|..||+.+++.+.++
T Consensus 394 ~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~ 473 (677)
T 1kb0_A 394 NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV 473 (677)
T ss_dssp CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE
T ss_pred CCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec
Confidence 14688898888877543 178999999999998888
Q ss_pred ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-CCeeEEEECCCCcEEEEE-eC-----------
Q psy17610 333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-ASITKIKISPDKKVIVSV-SA----------- 399 (515)
Q Consensus 333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~-~~----------- 399 (515)
... .+.....+..++.++++++.||.+++||.++++.+..+.... ..-.-+.|..+|+.++.. +.
T Consensus 474 ~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~ 551 (677)
T 1kb0_A 474 EHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARA 551 (677)
T ss_dssp EES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCS
T ss_pred CCC--CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccc
Confidence 754 333444566677888999999999999999999998876433 233446666788654443 22
Q ss_pred -----CCcEEEEeCCC
Q psy17610 400 -----DGGIFLWTFPE 410 (515)
Q Consensus 400 -----dg~i~iw~~~~ 410 (515)
.+.+..|.+..
T Consensus 552 ~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 552 TERQGPGTVYTFVVGG 567 (677)
T ss_dssp CSCCCCCEEEEEEETC
T ss_pred cccCCCCeEEEEeccc
Confidence 36778888763
No 217
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.4e-09 Score=110.36 Aligned_cols=397 Identities=13% Similarity=0.103 Sum_probs=238.5
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec-------cCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT-------CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV 153 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 153 (515)
...|.++...++|.+. +|+.+ -|.+||..++. ...... .....|.++...++| .|..++..+-|.++|.
T Consensus 210 ~~~i~~i~~d~~g~lw-igt~~-Gl~~~d~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIW-IGTSK-GLALFNANTET-FTNFHNNPGNIHGALSSYIFSIKQLKDN-KLWIATELNGIMILDL 285 (781)
T ss_dssp CSSEEEEEECTTCCEE-EEETT-EEEEEETTTTE-EEC-----------CCCCEEEEEECTTS-EEEEEESSSCEEEEET
T ss_pred CCceeEEEEcCCCCEE-EEeCC-cHheECCCCCc-EEEEEcCCCccccccCceEEEEEECCCC-CEEEEeCCCCeEEECC
Confidence 3579999998888754 45555 59999987743 222211 123569999998887 5556666566888998
Q ss_pred CCCceeEEEE--------------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec--------CCCCCC
Q psy17610 154 RTLNELLRIS--------------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP--------NAHNRG 211 (515)
Q Consensus 154 ~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--------~~~~~~ 211 (515)
.+++...... .....|.++...++|. |..|+.++-|..++..++....... ......
T Consensus 286 ~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 364 (781)
T 3v9f_A 286 QQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV 364 (781)
T ss_dssp TCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred CCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcc
Confidence 7654322111 1234688888888886 6667766668899887665433211 112356
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe-eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610 212 VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290 (515)
Q Consensus 212 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 290 (515)
|.++...++|. |..|+.++-|..|+........... .......|.++...+++. |..++.++-+..+|..+++....
T Consensus 365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 365 VSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp EEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEEC
T ss_pred eEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEe
Confidence 89999988876 4556666678889874321111100 012345688888877765 55577666788998876654332
Q ss_pred EE---cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC----CCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610 291 MI---LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS----DVAAVNCVDFVDDGKYFLTGGADQIVKM 363 (515)
Q Consensus 291 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i 363 (515)
.. ....+.++...+++...+ ++. +-+..+|..+++........ ....+.++...++|++.+ |+.++-+..
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~ 519 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGI 519 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEE
T ss_pred ccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEE
Confidence 21 124688888888877555 444 56889998876654333221 125788999999888555 444334777
Q ss_pred EEccCCeeeeeccC---CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610 364 WMYREGVPCFVGIG---HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL 440 (515)
Q Consensus 364 ~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (515)
+|..+++....... ....|.++...+++.+.+.. .+|.+..||........ .... . ...
T Consensus 520 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~---------~~~~----~----gl~ 581 (781)
T 3v9f_A 520 YTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQV---------FQRK----E----GLP 581 (781)
T ss_dssp ECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEE---------ECGG----G----TCS
T ss_pred EeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEE---------cccc----C----CCC
Confidence 88766543322111 23578999999998866544 46654788765432100 0000 0 001
Q ss_pred cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeec---cccc--ceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610 441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE---GSDV--AAVNCVDFVDDGKYFLTGGADQIVK 509 (515)
Q Consensus 441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~--~~v~~~~~s~~~~~l~s~~~dg~v~ 509 (515)
...+.++...++|.+.+++ .+| |..++..+++.. .+. +... -...++...++|+++ .|+.+|.++
T Consensus 582 ~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~~-~~~~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~Gl~~ 651 (781)
T 3v9f_A 582 NTHIRAISEDKNGNIWAST-NTG-ISCYITSKKCFY-TYDHSNNIPQGSFISGCVTKDHNGLIY-FGSINGLCF 651 (781)
T ss_dssp CCCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEEE-EECGGGTCCSSCEEEEEEEECTTSCEE-EEETTEEEE
T ss_pred CceEEEEEECCCCCEEEEc-CCc-eEEEECCCCceE-EecccCCccccccccCceEECCCCEEE-EECCCceEE
Confidence 1336778888888766654 455 777887765432 222 1111 224567778888854 466777544
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.9e-12 Score=119.87 Aligned_cols=235 Identities=12% Similarity=0.085 Sum_probs=163.5
Q ss_pred EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCcee-
Q psy17610 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQS- 244 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~- 244 (515)
....++|+++++.+++...++.|+.||+.+++...... .. .... ++|+++++.|+++..++ .|.+++.......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~-~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP-GF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE-TC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec-cC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46789999999877777777999999999887765542 22 2233 89999999988888766 6888887533221
Q ss_pred eEEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE----EEcCcc--EE-EEEEcCC-CcEEEEEECC
Q psy17610 245 LQCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII----MILPSM--IM-SAAYHPS-EVQLITCSTN 315 (515)
Q Consensus 245 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~--~~-~~~~~~~-~~~l~~~~~~ 315 (515)
..... ......+..++++|++..|+.+..++.|+.||..++..... ...... .. .++++|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 11111 21445678899999656666677788999999987764332 111111 13 8999996 5555555667
Q ss_pred CeEEEEeCCCCceEEEEecCC--------------CccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccCC--
Q psy17610 316 KMIDYWETCDGSIIRSLEGSD--------------VAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIGH-- 378 (515)
Q Consensus 316 ~~i~~~d~~~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-- 378 (515)
+.|+.|+.... ...+.+.. ......++++|+|+++++-. .++.|+.|++.+++.. .+.++
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~ 365 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVD 365 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCC
Confidence 89999987543 33332221 13478999999999888887 8899999998777543 33232
Q ss_pred -------------CCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610 379 -------------AASITKIKISPDKKVIVSVSADGGIFLWTF 408 (515)
Q Consensus 379 -------------~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~ 408 (515)
-.....+++++++.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245789999999888887777888888764
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.61 E-value=8.8e-13 Score=130.15 Aligned_cols=261 Identities=13% Similarity=0.145 Sum_probs=181.2
Q ss_pred CCCEEEEEecCceEEEEECCCCceeEEeecc-Cc---cCeEE-EEeCCCCcEEEEEec------CCcEEEEeCCCCceeE
Q psy17610 92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HT---SAIYD-LQFPVNFSSVFATCS------KNDIRIWSVRTLNELL 160 (515)
Q Consensus 92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~---~~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~ 160 (515)
++..|++++.|+.|..+|..+|+.+-....+ .. ..+.. ... .+..+++++. ++.|..+|.++|+.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3667888899999999999998776655432 10 11111 111 1346666654 6899999999999998
Q ss_pred EEEecCeE--------------------------------EEEEEEeeCCCEEEEEeCCC-------------------e
Q psy17610 161 RISVMNMI--------------------------------CACIVFTYDGKAILSGWNDG-------------------F 189 (515)
Q Consensus 161 ~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~dg-------------------~ 189 (515)
++...... ...++++|++..++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 87642211 12467889999888887664 5
Q ss_pred EEEEecCCCceEEEecCCCC--------CCeEEEEEcCCC---CEEEEecCCCcEEEEEccCCceeeEEeecc-------
Q psy17610 190 IRCFTPQSGKLKFIIPNAHN--------RGVTALAITQDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKE------- 251 (515)
Q Consensus 190 i~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------- 251 (515)
|..+|.++|+.+..+...+. .....+....+| ..++.++.+|.+.++|..+.+......+..
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999999999887653322 222333444467 678899999999999986544322211110
Q ss_pred --ccCce------------------------EEEEEecCCCEEEEEeC--------------------------------
Q psy17610 252 --HTSSV------------------------SVIQIKSDSKEAMSAST-------------------------------- 273 (515)
Q Consensus 252 --~~~~v------------------------~~~~~~~~~~~l~~~~~-------------------------------- 273 (515)
...++ ..++++|++.++++...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 00001 14688898888877543
Q ss_pred -----------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610 274 -----------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC 342 (515)
Q Consensus 274 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 342 (515)
.|.|..||+.+++.+.......+.....+...+..++.++.++.+++||..+++.+.++.........-
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP 524 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCC
Confidence 178999999999999888877666666677788888899999999999999999999998765344445
Q ss_pred EEEcCCCCEEEE
Q psy17610 343 VDFVDDGKYFLT 354 (515)
Q Consensus 343 ~~~~~~~~~l~~ 354 (515)
+.+..+|+.+++
T Consensus 525 ~~y~~~G~~~v~ 536 (677)
T 1kb0_A 525 STYMVDGRQYVS 536 (677)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCEEEEE
Confidence 667778875543
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=6.2e-12 Score=111.66 Aligned_cols=227 Identities=12% Similarity=0.068 Sum_probs=156.7
Q ss_pred CCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610 80 DDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE 158 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~ 158 (515)
+..---+..|+|++. ++++...++.|+.||..++.. .. .. ....+.+++++|+|+.++ +. ++.|.+||.++++.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~-~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QR-VT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EE-EE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EE-Ee-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence 344566889999654 555566778999999998543 22 22 456799999999998444 43 67899999987764
Q ss_pred eEEEEe----cCeEEEEEEEeeCCCEEEEEeC-----------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610 159 LLRISV----MNMICACIVFTYDGKAILSGWN-----------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR 223 (515)
Q Consensus 159 ~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 223 (515)
...... ....+..++++|+|+++++... .+.|..++.. ++..... .+....+.++|+|+++.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~--~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYF--DQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEE--EEESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEe--eccccccceEEcCCCCE
Confidence 333222 2346789999999996665432 2334444443 3333222 23345689999999987
Q ss_pred EE-EecCCCcEEEEEccCCcee-----eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-cc
Q psy17610 224 LL-SGGGEGQVRIWKLTRESQS-----LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SM 296 (515)
Q Consensus 224 l~-~~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~ 296 (515)
|+ +.+.++.|.+|+++..... ....+..+......++++++|++.++....+.|..||..+++.+..+..+ ..
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~ 242 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK 242 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence 65 4556788999997422221 12223334456788999999987777777888999999989988888877 57
Q ss_pred EEEEEEc-CCCcEEEEEEC
Q psy17610 297 IMSAAYH-PSEVQLITCST 314 (515)
Q Consensus 297 ~~~~~~~-~~~~~l~~~~~ 314 (515)
+.+++|. |+++.|++++.
T Consensus 243 ~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 243 TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEEESGGGCEEEEEEB
T ss_pred ceEEEEeCCCCCEEEEEcC
Confidence 9999998 88887776654
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.60 E-value=5.5e-13 Score=131.91 Aligned_cols=300 Identities=12% Similarity=0.139 Sum_probs=199.9
Q ss_pred CCCEEEEEecCceEEEEECCCCceeEEeeccCcc---------Ce-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---------AI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---------~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
.+..|++++.++.|+-+|..+|+.+-........ .+ ..++. ++..+++++.|+.+..+|.++|+.+.+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 3667888888999999999998776654321110 00 11222 345888888999999999999999988
Q ss_pred EEec-C----eEEEEEEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEecCCC-C--------------------
Q psy17610 162 ISVM-N----MICACIVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIPNAH-N-------------------- 209 (515)
Q Consensus 162 ~~~~-~----~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~-~-------------------- 209 (515)
+... . ..+.+.-.-.++ .++++. .+|.|..||.++|+.+..+.... .
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 7753 1 111110011144 455543 36899999999999987763211 0
Q ss_pred ---------CCeEEEEEcCCCCEEEEecCCCc-------------------EEEEEccCCceeeEEeecccc-------C
Q psy17610 210 ---------RGVTALAITQDGTRLLSGGGEGQ-------------------VRIWKLTRESQSLQCVLKEHT-------S 254 (515)
Q Consensus 210 ---------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~-------~ 254 (515)
.....++++|++..++.+..++. |..+|.++++.........|. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 01125788898888998887764 899998655544433332232 1
Q ss_pred ceEEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc------------------------------------
Q psy17610 255 SVSVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS------------------------------------ 295 (515)
Q Consensus 255 ~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------------------ 295 (515)
+........+|+ .++.++.+|.++++|.++++.+.......
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222223333565 68889999999999999999875443221
Q ss_pred ----cEEEEEEcCCCcEEEEEEC---------------------------------------------CCeEEEEeCCCC
Q psy17610 296 ----MIMSAAYHPSEVQLITCST---------------------------------------------NKMIDYWETCDG 326 (515)
Q Consensus 296 ----~~~~~~~~~~~~~l~~~~~---------------------------------------------~~~i~~~d~~~~ 326 (515)
.-..++++|+...+++... +|.|..||+.++
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0112678888887776532 377999999999
Q ss_pred ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCcEEEE
Q psy17610 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKKVIVS 396 (515)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~ 396 (515)
+.+.++..+. +.....+...+.+++.++.||.++.||.++|+.+..+...... -.-+.|..+|+..++
T Consensus 466 ~~~W~~~~~~--~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 466 QAAWEVPYVT--IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CeEeEccCCC--CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 9998887653 2333355567789999999999999999999999887644332 244677778874443
No 222
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=4.3e-14 Score=127.44 Aligned_cols=176 Identities=9% Similarity=0.012 Sum_probs=135.9
Q ss_pred cEEEEEEecCCCEEEEEecCceEEEEECCCCc---------eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610 83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---------TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV 153 (515)
Q Consensus 83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~ 153 (515)
+++.+++++...++++|+.+ .+.+|++++.. ........+.. |+.++| |+..|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68999999999999999988 56679876432 01111223666 999999 88888888 8899999999
Q ss_pred CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610 154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV 233 (515)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 233 (515)
.+.........+...+..+.+.+. .+++++.||.+.+||+.++.... +...|++++|+|+| ++.|..||.+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 988777777777888887776654 38889999999999999887653 34689999999999 6788999999
Q ss_pred EEEEccCCceeeEEee------c---cccCceEEEEEecCCCEEEEEe
Q psy17610 234 RIWKLTRESQSLQCVL------K---EHTSSVSVIQIKSDSKEAMSAS 272 (515)
Q Consensus 234 ~iw~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~~~~ 272 (515)
++|+...........+ . +|...|.++.|.+++.++++-.
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9998854332112333 2 3678899999999988877533
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.60 E-value=2.3e-13 Score=122.54 Aligned_cols=267 Identities=7% Similarity=-0.040 Sum_probs=183.2
Q ss_pred eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEEeCCCCceeEEEEecC-------
Q psy17610 104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIWSVRTLNELLRISVMN------- 166 (515)
Q Consensus 104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~------- 166 (515)
+|.++|..+++.+..+..+. .+ .+.++||+++++++. .++.|.+||+.+++.+.++..+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 89999999976666665554 35 799999999999987 36889999999999999987541
Q ss_pred eEEEEEEEeeCCCEEEEEeC--CCeEEE--EecCCCceEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCC
Q psy17610 167 MICACIVFTYDGKAILSGWN--DGFIRC--FTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRE 241 (515)
Q Consensus 167 ~~v~~~~~~~~~~~l~~~~~--dg~i~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~ 241 (515)
.....++++|||++++++.. +..+.+ +|+.+ ...+..+.. ..+.|++ ..+++.+.|+.+.+.++...
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-----~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-----FHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-----CCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-----eEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 23457899999999998874 467888 99887 344432211 1223433 34556677888888887530
Q ss_pred ---ceeeEE----eeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce--EEEEEEcC-----------ccEEEEE
Q psy17610 242 ---SQSLQC----VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST--RLIIMILP-----------SMIMSAA 301 (515)
Q Consensus 242 ---~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~-----------~~~~~~~ 301 (515)
..+... .+.-...+. . .+++..++..+. +.+.+.|..... ....+... .....++
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred cccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 011110 011112232 3 677777777777 899999986532 22222111 1112268
Q ss_pred EcCCCcEEEEEEC---------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEc-CCCeEEEEEccCCe
Q psy17610 302 YHPSEVQLITCST---------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGG-ADQIVKMWMYREGV 370 (515)
Q Consensus 302 ~~~~~~~l~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~ 370 (515)
++|++++++++.. .+.+.++|+.+.+.+..+... .....++|+|||+ ++++.. .++.|.++|+.+++
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 9999998887643 245679999999999888765 4688999999998 455555 58999999999999
Q ss_pred eeeeccCCCCCeeEEEECC
Q psy17610 371 PCFVGIGHAASITKIKISP 389 (515)
Q Consensus 371 ~~~~~~~~~~~i~~~~~~~ 389 (515)
.+.++..... ...+++.+
T Consensus 349 vv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 349 DQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEECCCCSC-CCEEECCC
T ss_pred EEEEEECCCC-CCEEEeec
Confidence 9988865543 34555543
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=2.5e-12 Score=114.78 Aligned_cols=237 Identities=9% Similarity=-0.013 Sum_probs=159.2
Q ss_pred ceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610 157 NELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI 235 (515)
Q Consensus 157 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 235 (515)
..+..+...........|+|+++ .+++...++.|..|+. +++. ..+ ..+...+..++++++|+++++...++.|..
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL-LDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE-EESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE-eCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 34555555555567889999998 5566667889999998 4543 233 235567899999999997776666678999
Q ss_pred EEccCCceeeEE-eeccc-cCceEEEEEecCCCEEEE----EeC-------------CCcEEEEEcccceEEEEEEcCcc
Q psy17610 236 WKLTRESQSLQC-VLKEH-TSSVSVIQIKSDSKEAMS----AST-------------DGTCVLWDLIKSTRLIIMILPSM 296 (515)
Q Consensus 236 w~~~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~ 296 (515)
|+.+ ....... ...+. ...+..++++++|+..++ +.. .+.|..+|..+++..... ....
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 9975 2222111 11111 234678999999997776 321 246777887666544433 3345
Q ss_pred EEEEEEcCCCcEEEEEECC------CeEEEEeCCCCceE--EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 297 IMSAAYHPSEVQLITCSTN------KMIDYWETCDGSII--RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 297 ~~~~~~~~~~~~l~~~~~~------~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
...++|+|+++.|+++... +.|..|++..+... ..+..........++++++|++. ++..+ .|.+|+. .
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~ 266 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-D 266 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-T
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-C
Confidence 6789999999988877665 78999998765411 12211122445678999999944 44444 5999998 5
Q ss_pred CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610 369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGG 402 (515)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 402 (515)
++.+..+..+. .+.+++|+|+++.|..++.++.
T Consensus 267 g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 267 GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 66666665544 5899999999988888877643
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=3.8e-13 Score=122.12 Aligned_cols=271 Identities=13% Similarity=0.108 Sum_probs=173.5
Q ss_pred CCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeC-----CC
Q psy17610 210 RGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSAST-----DG 275 (515)
Q Consensus 210 ~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~ 275 (515)
..+..++++++|+.+++.. .++.++||.+... ... .+ ..+...+..++++++++++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g--~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD--GLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT--EEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC--Cee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 6789999999999888853 2343566666422 221 11 234567899999999876555433 57
Q ss_pred cEEEEEcccceEEEEEEcC-------ccEEEEEEcCCCcEEEEE-E---CCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610 276 TCVLWDLIKSTRLIIMILP-------SMIMSAAYHPSEVQLITC-S---TNKMIDYWETCDGSIIRSLEGSDVAAVNCVD 344 (515)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~-~---~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 344 (515)
.|.+||+.+++.+..+..+ ..+..+++++++..++.+ . .++.|.+||+.+++..+.+..+.........
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 8999999998877777653 235789999865555444 3 5789999999988876665432111110134
Q ss_pred EcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610 345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK 424 (515)
Q Consensus 345 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 424 (515)
+.++|..+.+...++.+..|. ..+..++|+|+++.|+.+..++. ++|.+............ ..
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~--~~ 236 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTD--AE 236 (343)
T ss_dssp CEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCH--HH
T ss_pred eeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCCh--hh
Confidence 555777777777777765542 23678999999999988877664 45554321100000000 00
Q ss_pred eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec
Q psy17610 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504 (515)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 504 (515)
........++......++++++|.++++...++.|.+||.++++............+.+++|.++++++++.+.
T Consensus 237 ------~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 237 ------LGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp ------HHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred ------hhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 00000011122245678999999999988889999999986676544433322356899999999998888765
Q ss_pred CC
Q psy17610 505 DQ 506 (515)
Q Consensus 505 dg 506 (515)
.+
T Consensus 311 ~~ 312 (343)
T 2qe8_A 311 LH 312 (343)
T ss_dssp GG
T ss_pred cc
Confidence 44
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.58 E-value=1.5e-11 Score=113.50 Aligned_cols=301 Identities=12% Similarity=0.082 Sum_probs=191.6
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCC--------CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH--------NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV 248 (515)
Q Consensus 177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 248 (515)
.+..+++++.++.|..+|.++|+.+....... ...+.+.- ..++..+++++.++.|..+|..+++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 35678888889999999999999887664321 12232221 2245578888889999999986554433333
Q ss_pred eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE------EEEEcCCCcEEEEEECCCeEEEEe
Q psy17610 249 LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM------SAAYHPSEVQLITCSTNKMIDYWE 322 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~i~~~d 322 (515)
... ........ .+..++.++.++.+..+|..+++.+.......+.. .... .+..++++..++.+..+|
T Consensus 131 ~~~--~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 131 VAG--EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp CSS--CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEE
T ss_pred CCC--ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEE
Confidence 222 11111122 24578888899999999999999888777654432 1122 245677888899999999
Q ss_pred CCCCceEEEEecCCCccE---E---EEEEcC--CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610 323 TCDGSIIRSLEGSDVAAV---N---CVDFVD--DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI 394 (515)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i---~---~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 394 (515)
..+++.+........... . .+...| .+..+++++.++.+..+|..+++.+..... .....+.. ++..+
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l 280 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRI 280 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEE
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEE
Confidence 999999887764321100 0 011111 245677788899999999999988766542 23344444 45678
Q ss_pred EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe
Q psy17610 395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 474 (515)
Q Consensus 395 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 474 (515)
+.++.++.+..+|..+++....... . .......... .+..|++++.+|.++.+|..+|+
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~~-~------------------~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQSD-L------------------LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECT-T------------------TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred EEEcCCCeEEEEECCCCcEEEeecc-c------------------CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 8888899999999877642111000 0 0000111122 24678888899999999999999
Q ss_pred eeeeecccccceEEE-EEEcCCCcEEEEeecCCeEEEEE
Q psy17610 475 IIRSLEGSDVAAVNC-VDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 475 ~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
.+....... ..+.. ... .+..|+.++.||.|..|+
T Consensus 340 ~~~~~~~~~-~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 FVAQQKVDS-SGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEEECCT-TCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEEEEecCC-CcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 887776532 22222 222 244677888999999886
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.57 E-value=2.3e-12 Score=114.99 Aligned_cols=235 Identities=10% Similarity=0.059 Sum_probs=157.9
Q ss_pred ccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610 250 KEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI 328 (515)
Q Consensus 250 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~ 328 (515)
...........|+|+++ ++++...++.|..|+. +++..........+..++++++++.+++...++.|..|+.. ++.
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 33445667899999998 5566667889999998 45443333445578999999999977666666889999985 553
Q ss_pred EEEEec---CCCccEEEEEEcCCCCEEEE----EcC-------------CCeEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610 329 IRSLEG---SDVAAVNCVDFVDDGKYFLT----GGA-------------DQIVKMWMYREGVPCFVGIGHAASITKIKIS 388 (515)
Q Consensus 329 ~~~~~~---~~~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 388 (515)
...... .....+..++++|+|+++++ |.. .+.|..+|..+++..... .......++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~s 196 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFS 196 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEEC
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEc
Confidence 222211 11134667999999998886 432 256777887666544332 34556889999
Q ss_pred CCCcEEEEEeCC------CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC
Q psy17610 389 PDKKVIVSVSAD------GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN 462 (515)
Q Consensus 389 ~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 462 (515)
||++.|+.+... +.|.+|++.... +.. ..............++++++|++.+ ++.+
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--------l~~---------~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~ 258 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRDGA--------LHD---------RRHFASVPDGLPDGFCVDRGGWLWS-SSGT 258 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEETTE--------EEE---------EEEEECCSSSCCCSEEECTTSCEEE-CCSS
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecCCC--------ccC---------CeEEEECCCCCCCeEEECCCCCEEE-ecCC
Confidence 999988877665 689999875431 000 0000000123355688999999544 4444
Q ss_pred CeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610 463 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 463 g~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i 510 (515)
.|.+|+. +++.+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 259 -gv~~~~~-~g~~~~~~~~~~--~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 259 -GVCVFDS-DGQLLGHIPTPG--TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp -EEEEECT-TSCEEEEEECSS--CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred -cEEEECC-CCCEEEEEECCC--ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 4999997 677777777653 5889999999988888887765444
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=6.7e-13 Score=120.49 Aligned_cols=262 Identities=8% Similarity=0.022 Sum_probs=171.6
Q ss_pred CcEEEEEEecCCCEEEEEec--CceEEEEECCCCceeEEe------eccCccCeEEEEeCCCCcEEEEEec-----CCcE
Q psy17610 82 SGISSLQYNPVNNKVFVGTV--NCEIFLIDMNSGFTLTLV------NTCHTSAIYDLQFPVNFSSVFATCS-----KNDI 148 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i 148 (515)
..+..++++|+|+++++... ++.+.||.+.++. +... ..+|...+..++++++++.+++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 68999999999998888642 3424444443443 2211 1235568999999999865554433 5789
Q ss_pred EEEeCCCCceeEEEEec------CeEEEEEEEeeCCCEEE-EEe---CCCeEEEEecCCCceEEEecCCCCCCeE-EEEE
Q psy17610 149 RIWSVRTLNELLRISVM------NMICACIVFTYDGKAIL-SGW---NDGFIRCFTPQSGKLKFIIPNAHNRGVT-ALAI 217 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~-~~~---~dg~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 217 (515)
.+||+.+++.+..+... ...+..+++++++..++ +.. .++.|.+||+.+++....+ ..|..... ...+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~-~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL-QGYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC-TTCTTTSCCSCCC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe-cCCCcccccccce
Confidence 99999998877777642 12457889998655554 444 5789999999988876655 33322110 1334
Q ss_pred cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccce----------
Q psy17610 218 TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKST---------- 286 (515)
Q Consensus 218 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~---------- 286 (515)
.++|..+.+.+.++.++.|. ..+..++++|+++.|+.+..++ .+..++.....
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred eECCEEEEeccCCCceecee----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 44666666677777765543 1356799999999888887766 44444432100
Q ss_pred -EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610 287 -RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361 (515)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 361 (515)
.+...........+++++++..+++...++.|.+||..+++............+..+++.++++++++.+..+.+
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 011112223456789999999998888899999999856664433333323568899999998888877655443
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.56 E-value=1.4e-12 Score=117.41 Aligned_cols=248 Identities=4% Similarity=-0.071 Sum_probs=168.0
Q ss_pred EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc-C-----ccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610 86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC-H-----TSAIYDLQFPVNFSSVFATCS--KND 147 (515)
Q Consensus 86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~l~~~~~--d~~ 147 (515)
.++++||+++++++. .++.|.+||..+++....+.-+ . ......++++|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999999986 3689999999997666555322 0 123568999999999999875 467
Q ss_pred EEE--EeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCC-----CceEEE---ecCCCCCCeEEEE
Q psy17610 148 IRI--WSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQS-----GKLKFI---IPNAHNRGVTALA 216 (515)
Q Consensus 148 i~i--w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~-----~~~~~~---~~~~~~~~v~~~~ 216 (515)
+.+ +|+.+ +.++..... ..+.|+++ .+++.+.|+.+.+.++++ ++.... .......+. .
T Consensus 149 v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~ 218 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q 218 (368)
T ss_dssp EEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred EEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence 888 99877 444432211 22345543 445566788888888876 332211 001112233 3
Q ss_pred EcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC---------CCcE
Q psy17610 217 ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST---------DGTC 277 (515)
Q Consensus 217 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---------d~~i 277 (515)
.+++..++..+. +.+.+.|...........+.- .......+.++|++++++.+.. ++.+
T Consensus 219 -~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 219 -ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp -ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred -cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 566666666666 899999985433222222211 1112223689999998887543 2356
Q ss_pred EEEEcccceEEEEEEcCccEEEEEEcCCCcE-EEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610 278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ-LITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 347 (515)
.++|+.+.+.+..+........++++|++++ +++.. .++.|.++|+.+++.+.++... .....+++.+
T Consensus 297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg--~~P~~i~~~~ 366 (368)
T 1mda_H 297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD--KGPESLSVQN 366 (368)
T ss_dssp EEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC--SCCCEEECCC
T ss_pred EEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC--CCCCEEEeec
Confidence 7999999999998888888999999999985 55555 5899999999999999998765 3444566543
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.55 E-value=2e-11 Score=109.84 Aligned_cols=222 Identities=12% Similarity=0.019 Sum_probs=150.0
Q ss_pred EEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610 170 ACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV 248 (515)
Q Consensus 170 ~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 248 (515)
....|+|++. .+++...++.|..||..+++... + .....+.+++++++|+++++. .+ .|.+||...........
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~--~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-H--ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E--ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E--ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 4578999755 45555667899999998876543 2 134679999999999877654 44 48999985444322222
Q ss_pred ecc--ccCceEEEEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEE
Q psy17610 249 LKE--HTSSVSVIQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMID 319 (515)
Q Consensus 249 ~~~--~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~ 319 (515)
... ....+..+.++|+|+++++... .+.|..++ +++.............++|+|+++.++.+. .++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 111 1235789999999987665442 24455555 454433333334567899999998776654 468999
Q ss_pred EEeCC--CC-ce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC-CC
Q psy17610 320 YWETC--DG-SI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS-PD 390 (515)
Q Consensus 320 ~~d~~--~~-~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~ 390 (515)
+||.. ++ +. ...+... ...+..++++++|++.++...++.|..||. +++.+..+..+...+++++|+ |+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEcccccCCcccCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 99985 55 31 1122112 255678999999998777766789999998 567667766666779999998 88
Q ss_pred CcEEEEEeCC
Q psy17610 391 KKVIVSVSAD 400 (515)
Q Consensus 391 ~~~l~~~~~d 400 (515)
++.|+.++..
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 8777655543
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=2e-12 Score=128.91 Aligned_cols=243 Identities=11% Similarity=0.112 Sum_probs=163.7
Q ss_pred cCccCeEEEEeCCCCcEEEEEec-----CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC--------
Q psy17610 122 CHTSAIYDLQFPVNFSSVFATCS-----KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG-------- 188 (515)
Q Consensus 122 ~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------- 188 (515)
+|...+..++|||||++|+.+.. ...|++||+++++.+.. .........++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35567889999999998886553 24699999999986543 1111123568999 999999888774
Q ss_pred -----eEEEEecCCCce--EEEec-CC-CCCCeEEEEEcCCCCEEEEec----CCCcEEEEEccCCceeeEEeeccccCc
Q psy17610 189 -----FIRCFTPQSGKL--KFIIP-NA-HNRGVTALAITQDGTRLLSGG----GEGQVRIWKLTRESQSLQCVLKEHTSS 255 (515)
Q Consensus 189 -----~i~~~~~~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~ 255 (515)
.|++|++.++.. ...+. .. |......+.|+|||++|+... .+..|.++|+........ .+..+...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~-~l~~~~~~ 282 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL-TVQGDLDA 282 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-EEECSSSS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-EEeCCCCc
Confidence 499999987653 22221 22 445578899999999886443 235899999865433333 33444555
Q ss_pred eEEEEEecCCCEEEEEeC-C---CcEEEEEcccceE---EEEEEcCccEEEEEEcCCCcEEEEEECCC---eEEEEeCCC
Q psy17610 256 VSVIQIKSDSKEAMSAST-D---GTCVLWDLIKSTR---LIIMILPSMIMSAAYHPSEVQLITCSTNK---MIDYWETCD 325 (515)
Q Consensus 256 v~~~~~~~~~~~l~~~~~-d---~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i~~~d~~~ 325 (515)
.... +++++..|+..+. + +.|..+|+.++.. .........+. .++++++.|+....++ .|++|++..
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 5444 6677776665543 2 5799999987643 33333444444 8899998887766543 688999874
Q ss_pred CceEEEEecCCCccEEEEEEcCCCCEEEEEcCC----CeEEEEEccCCee
Q psy17610 326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD----QIVKMWMYREGVP 371 (515)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~ 371 (515)
.....+..+....+..+.++++++.++....+ +.+..||+.+++.
T Consensus 360 -~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 -KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp -CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred -CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 45566655444667788888888877665444 7899999877653
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.54 E-value=3.4e-11 Score=108.33 Aligned_cols=223 Identities=12% Similarity=0.065 Sum_probs=151.0
Q ss_pred cEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 83 GISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 83 ~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
-....+|+|+++ ++++...++.|..||.++++. ... . ....+.+++|+|+|+.++++ . ..|.+||.++++....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVH-A-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE-E-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE-E-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence 456789999755 555666778999999988643 222 2 34679999999998766554 3 4599999988765332
Q ss_pred EEe----cCeEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC
Q psy17610 162 ISV----MNMICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE 230 (515)
Q Consensus 162 ~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 230 (515)
... ....+..++++|+|+.+++... .+.|..++ +++..... .+......++|+|+++.++.+ +.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCcccCCeEEcCCCCEEEEEECCC
Confidence 221 1246889999999986665432 24566666 45543322 233456799999999876544 557
Q ss_pred CcEEEEEcc--CC-ce---eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEc
Q psy17610 231 GQVRIWKLT--RE-SQ---SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYH 303 (515)
Q Consensus 231 ~~i~iw~~~--~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~ 303 (515)
+.|.+|++. .. .. .....+.........++++++|.+.++...++.|..||. +++....+..+. .+.+++|.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999985 22 11 112223333455678999999987777767788999998 566666666654 68999998
Q ss_pred -CCCcEEEEEECC
Q psy17610 304 -PSEVQLITCSTN 315 (515)
Q Consensus 304 -~~~~~l~~~~~~ 315 (515)
++++.|++++..
T Consensus 280 g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 280 GPDASRLLVTSAR 292 (326)
T ss_dssp STTSCEEEEEEBC
T ss_pred cCCCCEEEEEecC
Confidence 888777665543
No 233
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=1e-12 Score=131.04 Aligned_cols=241 Identities=12% Similarity=0.062 Sum_probs=160.6
Q ss_pred CCCcEEEEEEecCCCEEEEEe-----cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--------
Q psy17610 80 DDSGISSLQYNPVNNKVFVGT-----VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN-------- 146 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-------- 146 (515)
|...+..++|||||++||.+. ....|++||+++|+.+.....+ .....++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 456788999999999999643 2357999999998755443321 113578899 999999998874
Q ss_pred -----cEEEEeCCCCce--eEEEEe---cCeEEEEEEEeeCCCEEEEEeC----CCeEEEEecCCCc-eEEEecCCCCCC
Q psy17610 147 -----DIRIWSVRTLNE--LLRISV---MNMICACIVFTYDGKAILSGWN----DGFIRCFTPQSGK-LKFIIPNAHNRG 211 (515)
Q Consensus 147 -----~i~iw~~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~-~~~~~~~~~~~~ 211 (515)
.|.+|++.++.. ...+.. +......+.|+|||++|+.... ...|.++|+.++. ....+ ..+...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l-~~~~~~ 282 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV-QGDLDA 282 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE-ECSSSS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE-eCCCCc
Confidence 399999987653 222222 2334678899999998875443 2589999998763 22333 244444
Q ss_pred eEEEEEcCCCCEEEEec-C---CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC---cEEEEEccc
Q psy17610 212 VTALAITQDGTRLLSGG-G---EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG---TCVLWDLIK 284 (515)
Q Consensus 212 v~~~~~~~~~~~l~~~~-~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~ 284 (515)
.... ++++|..|+..+ . .+.|..+++..........+..|...+. .|+++++.|+....++ .|++|++..
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 4444 566666555443 3 3678889986543311223444555554 8899999887766544 688999875
Q ss_pred ceEEEEEEcC--ccEEEEEEcCCCcEEEEEECC----CeEEEEeCCCCce
Q psy17610 285 STRLIIMILP--SMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGSI 328 (515)
Q Consensus 285 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~----~~i~~~d~~~~~~ 328 (515)
+. ...+..+ ..+..+.+++++..++....+ +.++.||+.+++.
T Consensus 360 ~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 360 KR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred Ce-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 43 4444433 356677778888877766554 7899999987764
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.51 E-value=1.3e-12 Score=118.31 Aligned_cols=299 Identities=11% Similarity=0.064 Sum_probs=193.6
Q ss_pred EEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC
Q psy17610 87 LQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN 166 (515)
Q Consensus 87 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 166 (515)
..+..++. |.+++.++.|..|| .+++.... ...+...+.++...+++ .+.+++.+ +..+|. +++.+..+....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~-~~~~~~~~~~~~~~~~g-~l~v~t~~--l~~~d~-~g~~~~~~~~~~ 97 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWF-FKSGEIIECRPSIGKDG-TIYFGSDK--VYAINP-DGTEKWRFDTKK 97 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEES-SCGGGEEEECCEETTTT-EECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEE-EecCCCcccceEEecCC-cEEEecCc--EEEECC-CCcEEEEEECCC
Confidence 44545554 66777788899999 77654333 23344456777777776 45555544 888886 555543333222
Q ss_pred eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610 167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ 246 (515)
Q Consensus 167 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 246 (515)
.......+. +..+.+++.++.+..+|.. ++...... .+...+.++...+++. +..++.++.+..+|.. . ...
T Consensus 98 ~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g--~~~ 169 (330)
T 3hxj_A 98 AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G--TEK 169 (330)
T ss_dssp ---CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S--CEE
T ss_pred CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C--CEe
Confidence 222223333 5568888889999999998 77766553 3444556667777776 5567778899999985 3 233
Q ss_pred EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610 247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~ 325 (515)
.........+.++...+++... .++ +.+..+| .+++........ ..+.++...+++. +.+++.++.+..+| .+
T Consensus 170 ~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~ 243 (330)
T 3hxj_A 170 WRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PD 243 (330)
T ss_dssp EEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TT
T ss_pred EEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CC
Confidence 3333344556667776777644 444 7899999 677666555543 3466777777765 55566778888887 46
Q ss_pred CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610 326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL 405 (515)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 405 (515)
++.+..+.... ..+..+.+.+++. |.+++.+|.+..+|. +++....+......+.++...++++ |..++.+|.+++
T Consensus 244 g~~~~~~~~~~-~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~ 319 (330)
T 3hxj_A 244 GTEKWRFKTGK-RIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYA 319 (330)
T ss_dssp SCEEEEEECSS-CCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEE
T ss_pred CCEeEEeeCCC-CccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEE
Confidence 66666666543 3344455665664 667778888999996 6776666655566778888888886 556889999998
Q ss_pred EeCCC
Q psy17610 406 WTFPE 410 (515)
Q Consensus 406 w~~~~ 410 (515)
...+.
T Consensus 320 ~~~~~ 324 (330)
T 3hxj_A 320 LFNLE 324 (330)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 87654
No 235
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.49 E-value=1.7e-12 Score=117.00 Aligned_cols=171 Identities=9% Similarity=0.046 Sum_probs=132.3
Q ss_pred CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc-----------eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610 126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN-----------ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT 194 (515)
Q Consensus 126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 194 (515)
++..+++++....+++++.+ .+++|++++.+ ..... .... |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999998888888876 56669876443 22233 3555 999999 89999998 889999999
Q ss_pred cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610 195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 274 (515)
+.+....... ..|..++.++.+.+. .+++++.||.+.+||+..... .. +...|++++|+|+| ++.+..|
T Consensus 113 v~sl~~~~~~-~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~--~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTV-TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST--KQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEE-EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE--EE----EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCcc-ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc--cc----ccCCceEEEEcCCc--eEEEEcC
Confidence 9877655444 467778888887765 388889999999999964432 21 45689999999999 6789999
Q ss_pred CcEEEEEcccceE--EEEE------E----cCccEEEEEEcCCCcEEEEEE
Q psy17610 275 GTCVLWDLIKSTR--LIIM------I----LPSMIMSAAYHPSEVQLITCS 313 (515)
Q Consensus 275 ~~i~iwd~~~~~~--~~~~------~----~~~~~~~~~~~~~~~~l~~~~ 313 (515)
|++++|+....+. ...+ . +...+.++.|.+++.++++-.
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999999887775 4555 1 345799999999988887643
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.47 E-value=2.2e-10 Score=103.38 Aligned_cols=223 Identities=9% Similarity=0.032 Sum_probs=151.9
Q ss_pred EeC--CCCcEEEEEec-CCcEEEEeCCCC----ceeEEEE------e-cCeEEEEEEEeeCCCEEEEEeCC------CeE
Q psy17610 131 QFP--VNFSSVFATCS-KNDIRIWSVRTL----NELLRIS------V-MNMICACIVFTYDGKAILSGWND------GFI 190 (515)
Q Consensus 131 ~~~--~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------g~i 190 (515)
.++ ++.++|++.+. +++|.++|+.+. +..+.+. . ....-..+..+|+| .++++..+ |.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 88888888877 788999999754 4444442 0 11244667888999 66665555 789
Q ss_pred EEEecCCCceEEEecCCCCC--CeEEEEEcCCCCEEEEec-------------------CCCcEEEEEccCCceeeEEee
Q psy17610 191 RCFTPQSGKLKFIIPNAHNR--GVTALAITQDGTRLLSGG-------------------GEGQVRIWKLTRESQSLQCVL 249 (515)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-------------------~d~~i~iw~~~~~~~~~~~~~ 249 (515)
.++|.++++.+.....+... --..+.|+|+++.+++.. ...+|.+||+... +....+
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--k~~~tI 244 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--KRIHSL 244 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--EEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--cEeeEE
Confidence 99999999999888533221 233578899999888874 3689999999643 344444
Q ss_pred ccc--cCceEEEEE--ecCCCEEEEEeC------CCcEEEEEcccceE--EEEEEc-------------------CccEE
Q psy17610 250 KEH--TSSVSVIQI--KSDSKEAMSAST------DGTCVLWDLIKSTR--LIIMIL-------------------PSMIM 298 (515)
Q Consensus 250 ~~~--~~~v~~~~~--~~~~~~l~~~~~------d~~i~iwd~~~~~~--~~~~~~-------------------~~~~~ 298 (515)
... ......+.| +|++++++.+++ +++|.+|....++- .+.+.. .....
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 321 123345555 999999887774 56887776654321 111100 23467
Q ss_pred EEEEcCCCcEEEEEEC-CCeEEEEeCCC---CceEEEEecCCC-------------ccEEEEEEcCCCCEEEEEc
Q psy17610 299 SAAYHPSEVQLITCST-NKMIDYWETCD---GSIIRSLEGSDV-------------AAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 299 ~~~~~~~~~~l~~~~~-~~~i~~~d~~~---~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~~ 356 (515)
.+.+++|+++|+++.. .+.|.+||+.. .+.+..+..... .....++++|||++|+++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8899999999988776 68999999853 355555554310 1357899999999999887
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.46 E-value=1.2e-12 Score=118.54 Aligned_cols=296 Identities=15% Similarity=0.128 Sum_probs=189.0
Q ss_pred EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc
Q psy17610 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE 251 (515)
Q Consensus 172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 251 (515)
.....++ .+.+++.++.|..|| .+++..... ......+.++...+++. +..++.+ +..+|.. .. .......
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~-~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~-g~--~~~~~~~ 95 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFF-KSGEIIECRPSIGKDGT-IYFGSDK--VYAINPD-GT--EKWRFDT 95 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTSCEEESS-CGGGEEEECCEETTTTE-ECCSSCE--EEEECCC-GG--GGGGSCC
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEE-ecCCCcccceEEecCCc-EEEecCc--EEEECCC-Cc--EEEEEEC
Confidence 3344455 466777788899999 888876654 23344456777776664 5556555 7777752 21 1111111
Q ss_pred ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610 252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR 330 (515)
Q Consensus 252 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~ 330 (515)
.........+. +..++.++.++.+..+|.. ++.......+. .+.++...+++. +.+++.++.+..+|.. ++...
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 12222223333 5667888888999999988 76666555443 345556666666 5567778999999998 88777
Q ss_pred EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 331 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
.+.... ..+.++...+++.+.+ ++ +.+..+| .+++...........+.++...+++. |..++.++.+..++...
T Consensus 171 ~~~~~~-~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 171 RFKTND-AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp EEECSS-CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred EEecCC-CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence 776544 5566777877887554 44 7789999 67777766666667788899988876 45566778888886422
Q ss_pred CcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEE
Q psy17610 411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 490 (515)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~ 490 (515)
... . ... .....+..+...+++ .|..++.+|.|..+|. +++.+..+.... ..+.++
T Consensus 245 ~~~--------~-~~~------------~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~-~~~~~~ 300 (330)
T 3hxj_A 245 TEK--------W-RFK------------TGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGS-WIIATP 300 (330)
T ss_dssp CEE--------E-EEE------------CSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSS-CCCSCC
T ss_pred CEe--------E-Eee------------CCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCC-ccccce
Confidence 110 0 000 001112234445455 5666777888999995 777776665443 567778
Q ss_pred EEcCCCcEEEEeecCCeEEEEE
Q psy17610 491 DFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 491 ~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
...++|+ |..++.+|.+++..
T Consensus 301 ~~d~~g~-l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 301 VIDENGT-IYFGTRNGKFYALF 321 (330)
T ss_dssp EECTTCC-EEEECTTSCEEEEE
T ss_pred EEcCCCE-EEEEcCCCeEEEEe
Confidence 8888887 45588899888754
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.44 E-value=8.6e-12 Score=116.63 Aligned_cols=253 Identities=8% Similarity=-0.019 Sum_probs=179.2
Q ss_pred CCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-eEEEEEEE-e-eCCCEEEEEe------------------CCCeEE
Q psy17610 134 VNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-MICACIVF-T-YDGKAILSGW------------------NDGFIR 191 (515)
Q Consensus 134 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~ 191 (515)
+||+++++... ++.|.+.|+++.+....+.... .....+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38888888777 5679999999999888665332 34677887 5 9999999885 245799
Q ss_pred EEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC---------------cEEEEEccCCceeeEEeeccccCce
Q psy17610 192 CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG---------------QVRIWKLTRESQSLQCVLKEHTSSV 256 (515)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~iw~~~~~~~~~~~~~~~~~~~v 256 (515)
++|.++.+...++..+- ....++++|+|+++++.+.+. .+.+.|.....
T Consensus 179 vID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~-------------- 242 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE-------------- 242 (595)
T ss_dssp EEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--------------
T ss_pred EEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee--------------
Confidence 99999999888875432 346778999999999888653 23444431100
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEEccc--ceE-EEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCc-----
Q psy17610 257 SVIQIKSDSKEAMSASTDGTCVLWDLIK--STR-LIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGS----- 327 (515)
Q Consensus 257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~----- 327 (515)
.+.++|+.... +.|.+.|.++ ++. +..+..+....++.++|||+++++++. +.++.++|+.+.+
T Consensus 243 ---~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~ 315 (595)
T 1fwx_A 243 ---KAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE 315 (595)
T ss_dssp ---HHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS
T ss_pred ---EeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccc
Confidence 02234544333 5699999998 555 667777778889999999999887764 7899999998653
Q ss_pred -------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC----------CeeeeeccCCCCCe-----eEE
Q psy17610 328 -------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----------GVPCFVGIGHAASI-----TKI 385 (515)
Q Consensus 328 -------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~i-----~~~ 385 (515)
...++... .....++|+|+|...++...|++|.+||+.. .+.+..+..|-.+- ..+
T Consensus 316 ~l~~~~~v~~~v~vG--~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~ 393 (595)
T 1fwx_A 316 NADPRSAVVAEPELG--LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGE 393 (595)
T ss_dssp CCCGGGGEEECCBCC--SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTT
T ss_pred ccCcccceEEEcCCC--CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccce
Confidence 33444333 5678999999995556677899999999977 44555555543321 223
Q ss_pred EECCCCcEEEEEeCC--CcE-----------EEEeCCCC
Q psy17610 386 KISPDKKVIVSVSAD--GGI-----------FLWTFPEL 411 (515)
Q Consensus 386 ~~~~~~~~l~~~~~d--g~i-----------~iw~~~~~ 411 (515)
.++|||++|++...- .++ .++|+...
T Consensus 394 t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 394 TLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp STTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 558999999988642 233 78888543
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.43 E-value=1.7e-09 Score=94.24 Aligned_cols=252 Identities=7% Similarity=-0.048 Sum_probs=161.0
Q ss_pred CCEEEEEecCceEEEEECCCCcee----EEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecCe
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTL----TLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMNM 167 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~ 167 (515)
|++|+.+.. +.|+.++++..... ...+......+..++|++++..|+.+.. .+.|..++.........+.....
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 345666654 47999998764211 1122212345789999997777777665 78899999876543332222224
Q ss_pred EEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCce
Q psy17610 168 ICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQ 243 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~ 243 (515)
....+++++++..|+.+ ...+.|.+++++........ .........++++|++..|..+.. .+.|..++++....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 56889999976666655 45678999998754433333 222346789999997666555443 36888888753322
Q ss_pred eeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEE
Q psy17610 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYW 321 (515)
Q Consensus 244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~ 321 (515)
... ..........+++++++..|+.+. ..+.|..+|+.................++.. +..++.+. .++.|..+
T Consensus 159 ~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 159 RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEE
Confidence 211 112234578899999877665554 4578999999765544444433445566654 44555444 56899999
Q ss_pred eCCCCceEEEEecCCCccEEEEEEcCCCC
Q psy17610 322 ETCDGSIIRSLEGSDVAAVNCVDFVDDGK 350 (515)
Q Consensus 322 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 350 (515)
|..+++.+..+..........+++.|++.
T Consensus 235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 235 DLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred eCCCCCceEEEccccccccceeeecCccC
Confidence 99999998888754323466778887754
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.41 E-value=4.7e-10 Score=101.26 Aligned_cols=225 Identities=11% Similarity=0.032 Sum_probs=154.6
Q ss_pred EEe--cCCCEEEEEe-cCceEEEEECCCC-c--eeEEeec-------cCccCeEEEEeCCCCcEEEEEecC------CcE
Q psy17610 88 QYN--PVNNKVFVGT-VNCEIFLIDMNSG-F--TLTLVNT-------CHTSAIYDLQFPVNFSSVFATCSK------NDI 148 (515)
Q Consensus 88 ~~s--~~~~~l~~~~-~d~~i~iw~~~~~-~--~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~d------~~i 148 (515)
+++ +++++|++.+ .+++|.++|+.+. . ++..+.. .....-..+..+|+| .++++..+ +.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 336 7888887754 5689999999753 1 2333331 011234567888999 66655555 789
Q ss_pred EEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEe-------------------CCCeEEEEecCCCceEEEecC
Q psy17610 149 RIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGW-------------------NDGFIRCFTPQSGKLKFIIPN 206 (515)
Q Consensus 149 ~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~~~~~~~~~~~~~~~~ 206 (515)
.+.|.++++.+.++..... --..+.|+|+++.+++.. ...+|.+||+.+++...++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 9999999999888863322 124578899999888874 368999999999988887754
Q ss_pred C-CCCCeEEEEE--cCCCCEEEEecC------CCcEEEEEccCCceeeEEee--ccc----------------cCceEEE
Q psy17610 207 A-HNRGVTALAI--TQDGTRLLSGGG------EGQVRIWKLTRESQSLQCVL--KEH----------------TSSVSVI 259 (515)
Q Consensus 207 ~-~~~~v~~~~~--~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~--~~~----------------~~~v~~~ 259 (515)
+ .......+.| +|+++++.++++ +++|.+|..+.+.......+ ... ......+
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 3 2234456666 999998887764 56888877654332222221 110 2346789
Q ss_pred EEecCCCEEEEEeC-CCcEEEEEccc---ceEEEEEEcCc---------------cEEEEEEcCCCcEEEEEE
Q psy17610 260 QIKSDSKEAMSAST-DGTCVLWDLIK---STRLIIMILPS---------------MIMSAAYHPSEVQLITCS 313 (515)
Q Consensus 260 ~~~~~~~~l~~~~~-d~~i~iwd~~~---~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~ 313 (515)
.+++|+++|+++.. .+.|.++|+.. .+.+..+...+ ....++++|+|++|+++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999987776 67999999852 35555554431 368899999999999886
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=6.6e-10 Score=109.67 Aligned_cols=301 Identities=11% Similarity=0.143 Sum_probs=194.2
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccCcc---------Ce-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---------AI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---------~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 162 (515)
+..|++++.++.|+-+|..+|+.+-........ .+ ..+++ .+..+++++.|+.|..+|.++|+.+.++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 667888888999999999998776654321110 00 11222 2457888888999999999999999887
Q ss_pred EecC----eEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCC--C---------------------
Q psy17610 163 SVMN----MICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAH--N--------------------- 209 (515)
Q Consensus 163 ~~~~----~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~--~--------------------- 209 (515)
.... ..+.+.-.-.+ ..++++.. +|.|..+|.++|+.+..+.... .
T Consensus 144 ~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp ECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred ccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 7531 11111001113 35555543 5899999999999988764211 0
Q ss_pred -------CCeEEEEEcCCCCEEEEecCCCc-------------------EEEEEccCCceeeEEeecccc-------Cce
Q psy17610 210 -------RGVTALAITQDGTRLLSGGGEGQ-------------------VRIWKLTRESQSLQCVLKEHT-------SSV 256 (515)
Q Consensus 210 -------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~-------~~v 256 (515)
.....+++.++...++.++.++. |..+|.++.+.........|. .+.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence 01124688888888888877663 888888655544443333232 233
Q ss_pred EEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc-------------cE-----------------------
Q psy17610 257 SVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS-------------MI----------------------- 297 (515)
Q Consensus 257 ~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~----------------------- 297 (515)
....+..+++ .++.++.+|.++++|..+++.+....... ++
T Consensus 303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~ 382 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHN 382 (668)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSC
T ss_pred EEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccC
Confidence 3333344665 68889999999999999998875443221 00
Q ss_pred -EEEEEcCCCcEEEEEE------------------------------------CCCeEEEEeCCCCceEEEEecCCCccE
Q psy17610 298 -MSAAYHPSEVQLITCS------------------------------------TNKMIDYWETCDGSIIRSLEGSDVAAV 340 (515)
Q Consensus 298 -~~~~~~~~~~~l~~~~------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~i 340 (515)
..++++|+...+++.. .++.|..||+.+++.+.+..... +.
T Consensus 383 w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~ 460 (668)
T 1kv9_A 383 WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HW 460 (668)
T ss_dssp SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SC
T ss_pred CCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--CC
Confidence 1257777766665421 23789999999999988877543 22
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCc-EEEEEe
Q psy17610 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKK-VIVSVS 398 (515)
Q Consensus 341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~l~~~~ 398 (515)
....+...+.++++++.||.++.||.++++.+..+....... .-+.+..+|+ +++.++
T Consensus 461 ~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 461 NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 333444567789999999999999999999988776543211 2234445666 444444
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=1e-10 Score=115.40 Aligned_cols=259 Identities=14% Similarity=0.191 Sum_probs=169.8
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATCS------KNDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~ 164 (515)
+..+++++.|+.|..+|.++|+.+-............+..+| .+..+++++. ++.|..+|.++|+.+.++..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 567888889999999999998777655432111111111122 1235666554 48899999999999988863
Q ss_pred cC-------------------------------eEEEEEEEeeCCCEEEEEeCCC-------------------eEEEEe
Q psy17610 165 MN-------------------------------MICACIVFTYDGKAILSGWNDG-------------------FIRCFT 194 (515)
Q Consensus 165 ~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~~~~ 194 (515)
.. .....+++.|+...++.+..++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 11 0112467888888888887766 499999
Q ss_pred cCCCceEEEecCC-CC-------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeEEeecc---------cc-
Q psy17610 195 PQSGKLKFIIPNA-HN-------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQCVLKE---------HT- 253 (515)
Q Consensus 195 ~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---------~~- 253 (515)
.++|+.+..+... |. .+.....+..+|+ .++.++.+|.+.++|..+.+......+.. ..
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999998877543 22 2333333334564 68889999999999986543321111000 00
Q ss_pred Cc------------------------eEEEEEecCCCEEEEEe------------------------------------C
Q psy17610 254 SS------------------------VSVIQIKSDSKEAMSAS------------------------------------T 273 (515)
Q Consensus 254 ~~------------------------v~~~~~~~~~~~l~~~~------------------------------------~ 273 (515)
.+ -..++++|+...++... .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 00 01257777766655421 2
Q ss_pred CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610 274 DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY 351 (515)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 351 (515)
+|.|..||+.+++.+.......+.....+...+.++++++.++.++.||.++++.+..+.........-+.+..+|+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 378999999999998888776655555556678889999999999999999999999988653222223444456663
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.38 E-value=9.1e-10 Score=103.15 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=161.4
Q ss_pred cCCCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEe-C-CCCcEEEEEe------------------cCCcEE
Q psy17610 91 PVNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF-P-VNFSSVFATC------------------SKNDIR 149 (515)
Q Consensus 91 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~ 149 (515)
+||++|.+... ++.|.+.|+++.+....+.-........+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38899888765 4679999999954444222223345788887 5 9999999985 246799
Q ss_pred EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC--------------------------------------eEE
Q psy17610 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG--------------------------------------FIR 191 (515)
Q Consensus 150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~ 191 (515)
+.|.++.+...++.... ....++++|+|+++++.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999999888887644 346678999999999887543 366
Q ss_pred EEecCC--Cce-EEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCCc----------eeeEEeeccccCceE
Q psy17610 192 CFTPQS--GKL-KFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRES----------QSLQCVLKEHTSSVS 257 (515)
Q Consensus 192 ~~~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~----------~~~~~~~~~~~~~v~ 257 (515)
+.|..+ ++. +..++. .....++.++|||+++++++ .+.+|.++|+.+.. ........ -.....
T Consensus 258 VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 777776 444 444432 23457899999999877655 67899999996321 01222222 234567
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEccc----------ceEEEEEEcCccEEEE------EEcCCCcEEEEEECCC--eE-
Q psy17610 258 VIQIKSDSKEAMSASTDGTCVLWDLIK----------STRLIIMILPSMIMSA------AYHPSEVQLITCSTNK--MI- 318 (515)
Q Consensus 258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~--~i- 318 (515)
.++|+|+|...++.-.|++|..||+.. .+.+..+..+...-.. ..+|||++|++...-. .+
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL 414 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence 899999994444556689999999987 5566777666543222 3479999999876522 22
Q ss_pred ----------EEEeCCCCc
Q psy17610 319 ----------DYWETCDGS 327 (515)
Q Consensus 319 ----------~~~d~~~~~ 327 (515)
.++|+..++
T Consensus 415 ~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 415 NVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCSSCCEEEEEEECSSSS
T ss_pred cCCCCCCCcceEEEcCCCc
Confidence 788886554
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.37 E-value=4.8e-10 Score=108.27 Aligned_cols=299 Identities=9% Similarity=0.045 Sum_probs=181.8
Q ss_pred CCEEEEEeC-CCeEEEEec-CCCceEEEecCCCCCCe----------EEEEEcCCCCEEEEecCCCcEEEEEccCCceee
Q psy17610 178 GKAILSGWN-DGFIRCFTP-QSGKLKFIIPNAHNRGV----------TALAITQDGTRLLSGGGEGQVRIWKLTRESQSL 245 (515)
Q Consensus 178 ~~~l~~~~~-dg~i~~~~~-~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 245 (515)
+..+++++. ++.|..+|. .+|+.+..........+ ..+++ .+..++.++.|+.+..+|..+.+...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456777777 889999999 89999877642221100 11222 35578888889999999986555444
Q ss_pred EEeeccccC--ceEE-EEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCccE-------------------
Q psy17610 246 QCVLKEHTS--SVSV-IQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPSMI------------------- 297 (515)
Q Consensus 246 ~~~~~~~~~--~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~------------------- 297 (515)
......+.. .+.+ ... .+ ..++.++. ++.|..+|.++++.+..+....+.
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 433332211 1111 111 13 45555554 789999999999998877654321
Q ss_pred --------------------EEEEEcCCCcEEEEEECC----------------CeEEEEeCCCCceEEEEecCCC----
Q psy17610 298 --------------------MSAAYHPSEVQLITCSTN----------------KMIDYWETCDGSIIRSLEGSDV---- 337 (515)
Q Consensus 298 --------------------~~~~~~~~~~~l~~~~~~----------------~~i~~~d~~~~~~~~~~~~~~~---- 337 (515)
..+++.++...++.+..+ +.|..+|..+++.+..+.....
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 135667776777766542 3699999999999988874320
Q ss_pred ----ccEEEEEEcCCCC---EEEEEcCCCeEEEEEccCCeeeeeccCCC-------------CCe---------------
Q psy17610 338 ----AAVNCVDFVDDGK---YFLTGGADQIVKMWMYREGVPCFVGIGHA-------------ASI--------------- 382 (515)
Q Consensus 338 ----~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~i--------------- 382 (515)
....-+....+|+ .++.++.+|.++++|..+++.+....... .++
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 377 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTN 377 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEE
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceE
Confidence 1111223334674 67788999999999999998876543211 111
Q ss_pred -----------eEEEECCCCcEEEEEeCC-------------------------------------CcEEEEeCCCCcCc
Q psy17610 383 -----------TKIKISPDKKVIVSVSAD-------------------------------------GGIFLWTFPELEDD 414 (515)
Q Consensus 383 -----------~~~~~~~~~~~l~~~~~d-------------------------------------g~i~iw~~~~~~~~ 414 (515)
..++++|+..++++...+ |.+..||+.+++..
T Consensus 378 ~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~ 457 (571)
T 2ad6_A 378 ICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAK 457 (571)
T ss_dssp ESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEE
T ss_pred ECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEE
Confidence 246788888888776554 33444443332210
Q ss_pred cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcC
Q psy17610 415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 494 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 494 (515)
........+....+...+..++.++.||.|+.+|..+|+.+.++.......-..+.+..
T Consensus 458 ---------------------W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 458 ---------------------WTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp ---------------------EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred ---------------------EEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 00001111222223334667788999999999999999999888754311112234567
Q ss_pred CCcEEEE
Q psy17610 495 DGKYFLT 501 (515)
Q Consensus 495 ~~~~l~s 501 (515)
+|+.++.
T Consensus 517 ~G~~yv~ 523 (571)
T 2ad6_A 517 KGKQYIG 523 (571)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8875544
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.35 E-value=2.8e-09 Score=102.97 Aligned_cols=297 Identities=11% Similarity=0.074 Sum_probs=188.0
Q ss_pred CCEEEEEec-CceEEEEEC-CCCceeEEeeccCccCe----------EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610 93 NNKVFVGTV-NCEIFLIDM-NSGFTLTLVNTCHTSAI----------YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL 160 (515)
Q Consensus 93 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~h~~~v----------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 160 (515)
+..+++++. ++.|.-+|. ++|+.+-.........+ ..++. ++..+++++.|+.+..+|.++|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556777777 889999999 88877655432211100 11222 24588888889999999999999988
Q ss_pred EEEecCe----EEEE-EEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCC-------------------
Q psy17610 161 RISVMNM----ICAC-IVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNR------------------- 210 (515)
Q Consensus 161 ~~~~~~~----~v~~-~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~------------------- 210 (515)
+...... .+.+ ... .+ ..+++++. ++.|..+|.++|+.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 8764321 1111 111 13 45666654 789999999999998776432110
Q ss_pred ------------------CeEEEEEcCCCCEEEEecCC----------------CcEEEEEccCCceeeEEeecccc---
Q psy17610 211 ------------------GVTALAITQDGTRLLSGGGE----------------GQVRIWKLTRESQSLQCVLKEHT--- 253 (515)
Q Consensus 211 ------------------~v~~~~~~~~~~~l~~~~~d----------------~~i~iw~~~~~~~~~~~~~~~~~--- 253 (515)
....+++.++...++.+..+ +.|..+|.++.+.........|.
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 00135666766667666532 25888888655444433333221
Q ss_pred -----CceEEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc--------------cE--------------
Q psy17610 254 -----SSVSVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS--------------MI-------------- 297 (515)
Q Consensus 254 -----~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~-------------- 297 (515)
.++. +....+|+ .++.++.+|.+.++|..+++.+....... ++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 2221 22234674 56778889999999999998887765432 11
Q ss_pred ------------EEEEEcCCCcEEEEEE-------------------------------------CCCeEEEEeCCCCce
Q psy17610 298 ------------MSAAYHPSEVQLITCS-------------------------------------TNKMIDYWETCDGSI 328 (515)
Q Consensus 298 ------------~~~~~~~~~~~l~~~~-------------------------------------~~~~i~~~d~~~~~~ 328 (515)
..++++|+...+++.. .++.+..||+.+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2357788877776653 347899999999999
Q ss_pred EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCcEEEE
Q psy17610 329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKKVIVS 396 (515)
Q Consensus 329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~ 396 (515)
+.++.... .+....+...+..+++++.||.++.+|.++++.+..+...... -.-+.+..+++.++.
T Consensus 457 ~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 457 KWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEecCCC--CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 88876542 2222222334567778999999999999999998877543221 122345567764443
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.34 E-value=1.8e-09 Score=104.12 Aligned_cols=256 Identities=11% Similarity=0.054 Sum_probs=161.8
Q ss_pred EEEEEecCceEEEEECCCCceeEEeeccC-cc--CeEE-EEeCCCCcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610 95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TS--AIYD-LQFPVNFSSVFATCS------KNDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~--~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~ 164 (515)
+|++++.|+.|..+|.++|+.+-...... .. .+.+ .... ++ .+++++. ++.|+-+|.++|+.+.++..
T Consensus 123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 38888889999999999987765543221 10 1111 1111 33 5666553 78999999999999988774
Q ss_pred cCeEE--------------------------------------EEEEEeeCCCEEEEEeCC----------------CeE
Q psy17610 165 MNMIC--------------------------------------ACIVFTYDGKAILSGWND----------------GFI 190 (515)
Q Consensus 165 ~~~~v--------------------------------------~~~~~~~~~~~l~~~~~d----------------g~i 190 (515)
..... ..+++.++...++.+..+ +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 32110 134566777778877665 379
Q ss_pred EEEecCCCceEEEecCCCCC--------CeEEEEEc-CCC---CEEEEecCCCcEEEEEccCCceeeEEeecc-------
Q psy17610 191 RCFTPQSGKLKFIIPNAHNR--------GVTALAIT-QDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKE------- 251 (515)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~-~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------- 251 (515)
..+|.++|+.+..+...+.. ...-+... .+| ..++.++.+|.+.++|..+.+......+..
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 99999999998877544321 11112222 467 467778899999999986543322221110
Q ss_pred ----ccCce--------------------------EEEEEecCCCEEEEEe-----------------------------
Q psy17610 252 ----HTSSV--------------------------SVIQIKSDSKEAMSAS----------------------------- 272 (515)
Q Consensus 252 ----~~~~v--------------------------~~~~~~~~~~~l~~~~----------------------------- 272 (515)
...++ ..++++|+..++++..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 00011 2356666665554421
Q ss_pred ----------CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610 273 ----------TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC 342 (515)
Q Consensus 273 ----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 342 (515)
..|.+..||+.+++.+.......+...-.+...+..++.++.++.++.||.++++.+.+++........-
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP 520 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence 3478999999999988877655433322233456777889999999999999999999987654222233
Q ss_pred EEEcCCCCEE
Q psy17610 343 VDFVDDGKYF 352 (515)
Q Consensus 343 ~~~~~~~~~l 352 (515)
+.+..+|+.+
T Consensus 521 ~~y~~~G~qy 530 (599)
T 1w6s_A 521 MTYTHKGTQY 530 (599)
T ss_dssp EEEEETTEEE
T ss_pred EEEEeCCEEE
Confidence 4555566543
No 247
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.33 E-value=2.8e-09 Score=102.70 Aligned_cols=296 Identities=11% Similarity=0.075 Sum_probs=186.8
Q ss_pred CCEEEEEec-CceEEEEEC-CCCceeEEeeccCcc----------CeEEEEeCCCCcE----EEEEecCCcEEEEeCCCC
Q psy17610 93 NNKVFVGTV-NCEIFLIDM-NSGFTLTLVNTCHTS----------AIYDLQFPVNFSS----VFATCSKNDIRIWSVRTL 156 (515)
Q Consensus 93 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~----l~~~~~d~~i~iw~~~~~ 156 (515)
+..|++++. ++.|.-+|. .+|+.+-........ ....++++|.+.. +++++.|+.+.-+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 566777777 889999999 888776554322111 0123455443444 888888999999999999
Q ss_pred ceeEEEEecCe----EEEE-EEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEecCCCCCC--------------
Q psy17610 157 NELLRISVMNM----ICAC-IVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIPNAHNRG-------------- 211 (515)
Q Consensus 157 ~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~~~~-------------- 211 (515)
+.+.+...... .+.+ ... .++ .+++++ .++.|+.+|.++|+.+..+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 99888764321 1111 111 244 555555 37999999999999987764322110
Q ss_pred ----------------------e-EEEEEcCCCCEEEEecCC----------------CcEEEEEccCCceeeEEeeccc
Q psy17610 212 ----------------------V-TALAITQDGTRLLSGGGE----------------GQVRIWKLTRESQSLQCVLKEH 252 (515)
Q Consensus 212 ----------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~iw~~~~~~~~~~~~~~~~ 252 (515)
+ ..+++.++...++.+..+ +.|.-+|.++.+.........|
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 134666777777777655 3788888865554444443333
Q ss_pred c--------CceEEEEEe-cCC---CEEEEEeCCCcEEEEEcccceEEEEEEcCc--------------cE---------
Q psy17610 253 T--------SSVSVIQIK-SDS---KEAMSASTDGTCVLWDLIKSTRLIIMILPS--------------MI--------- 297 (515)
Q Consensus 253 ~--------~~v~~~~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~--------- 297 (515)
. .++. +... .+| ..++.++.+|.+.++|.++++.+....... ++
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 2 1221 2222 466 457778899999999999999887665321 11
Q ss_pred -----------------EEEEEcCCCcEEEEEE---------------------------------------CCCeEEEE
Q psy17610 298 -----------------MSAAYHPSEVQLITCS---------------------------------------TNKMIDYW 321 (515)
Q Consensus 298 -----------------~~~~~~~~~~~l~~~~---------------------------------------~~~~i~~~ 321 (515)
..++++|+..++++.. ..|.+..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 2356677666554421 34789999
Q ss_pred eCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCcE
Q psy17610 322 ETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKKV 393 (515)
Q Consensus 322 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~ 393 (515)
|+.+++.+.+..... +...-.+...+.+++.++.||.++.||.++|+.+.+++.....+ .-+.+..+|+.
T Consensus 459 D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 459 NAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ECCCCCEEeEecCCC--CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 999999888776432 11111122246678889999999999999999988775433222 22445556663
No 248
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=99.33 E-value=1.6e-06 Score=90.14 Aligned_cols=408 Identities=11% Similarity=0.044 Sum_probs=223.6
Q ss_pred cCCCcEEEEEEecC------CCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEeC--CCCcEEEEEecCCcEE
Q psy17610 79 KDDSGISSLQYNPV------NNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP--VNFSSVFATCSKNDIR 149 (515)
Q Consensus 79 ~~~~~v~~~~~s~~------~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~~~~~d~~i~ 149 (515)
.-+..|.|+++.|. .+++|+|.. |++++|+++++-+.+....-+......++.+. ....+|+++-.||.+.
T Consensus 551 ~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 551 EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 34678999999873 379999996 99999999987433322211112233444332 2346788888899876
Q ss_pred EEeC--CCCceeEE--EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-EEEEEcCC--CC
Q psy17610 150 IWSV--RTLNELLR--ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-TALAITQD--GT 222 (515)
Q Consensus 150 iw~~--~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~--~~ 222 (515)
-+.+ .+|+.... ..-...++.-..+...+..-+.+..+.-..++.-+ ++....- ..- ..+ ....|+.. .+
T Consensus 631 ~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~-l~~-~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSN-VNL-KEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEE-BSS-SCCCEEEEECCSSSTT
T ss_pred EEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEec-cCh-HHhceEeccCcccCCC
Confidence 5554 34543322 22223344444444444433333334333444322 3433221 111 223 33345432 23
Q ss_pred EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC----------------------------
Q psy17610 223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD---------------------------- 274 (515)
Q Consensus 223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------- 274 (515)
-++..+ ++.++|..++....-....++ -...+..++++|+.+.++.+..+
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred cEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 455444 356999888543322232222 23456777777776655433211
Q ss_pred ---------------------CcEEEEEcccceEEEEEEcCc--cEEEEEE---cC-CCcEEEEEE----------CCCe
Q psy17610 275 ---------------------GTCVLWDLIKSTRLIIMILPS--MIMSAAY---HP-SEVQLITCS----------TNKM 317 (515)
Q Consensus 275 ---------------------~~i~iwd~~~~~~~~~~~~~~--~~~~~~~---~~-~~~~l~~~~----------~~~~ 317 (515)
+.+++.|..+.+.+..+.... .+.+++. .. ...++++|+ ..|.
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gr 865 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR 865 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEE
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceE
Confidence 236677777666666655443 3444443 22 246788776 3578
Q ss_pred EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610 318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 397 (515)
|++|++..++.....+....+++++++-- +|++++.. ...+++|++...+.+..-..+-..|..+.....+++++.|
T Consensus 866 i~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vg 942 (1158)
T 3ei3_A 866 IVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVG 942 (1158)
T ss_dssp EEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEE
T ss_pred EEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEE
Confidence 99999875443333333334678777644 35544443 4689999997654333111111123333333357789999
Q ss_pred eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC----
Q psy17610 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---- 473 (515)
Q Consensus 398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~---- 473 (515)
+.-..+.+...+..+. .+ ........+.+++++.+-.++ .++.++.+|.+.+......
T Consensus 943 D~~~Sv~~~~y~~~~~------~L-----------~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~ 1004 (1158)
T 3ei3_A 943 DLMRSVLLLAYKPMEG------NF-----------EEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSAATTD 1004 (1158)
T ss_dssp ESSBCEEEEEEETTTT------EE-----------EEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTTCCST
T ss_pred EhhheEEEEEEEcCCC------eE-----------EEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCCCCCc
Confidence 8888888776543211 00 011112244568888887554 6777999999999876431
Q ss_pred ----eeeeeecccccceEEEEE---EcCC---------CcEEEEeecCCeEEEEE
Q psy17610 474 ----SIIRSLEGSDVAAVNCVD---FVDD---------GKYFLTGGADQIVKICL 512 (515)
Q Consensus 474 ----~~~~~~~~~~~~~v~~~~---~s~~---------~~~l~s~~~dg~v~iw~ 512 (515)
++...-.-|-...|+++. +.+. ...++.++.+|.|-+.-
T Consensus 1005 ~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 1005 EERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp TGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred cccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence 222332333346677775 3332 23577788999887653
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.33 E-value=4.4e-09 Score=101.64 Aligned_cols=297 Identities=13% Similarity=0.121 Sum_probs=184.7
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccCccCe--------EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI--------YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v--------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 164 (515)
+..+++++.++.|.-+|.++|+.+-.......... ..++. .+..+++++.++.+.-+|.++|+.+.+...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 45566666644599999999877655432211100 11222 245788888899999999999999988764
Q ss_pred cCe----EEE-EEEEeeC---CC-EEEEEe------CCCeEEEEecCCCceEEEecCCCCCC------------------
Q psy17610 165 MNM----ICA-CIVFTYD---GK-AILSGW------NDGFIRCFTPQSGKLKFIIPNAHNRG------------------ 211 (515)
Q Consensus 165 ~~~----~v~-~~~~~~~---~~-~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~~~~------------------ 211 (515)
... .+. ......+ ++ .+++++ .++.|..+|.++|+.+....... ..
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~-~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVE-GHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESST-TCEEEETTEEEEESSCTTCT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCc-cccccccCcccccccccccc
Confidence 321 111 1112222 23 566654 37899999999999887653210 00
Q ss_pred -----------------------eEEEEEcCCCCEEEEecC--------------------C----CcEEEEEccCCcee
Q psy17610 212 -----------------------VTALAITQDGTRLLSGGG--------------------E----GQVRIWKLTRESQS 244 (515)
Q Consensus 212 -----------------------v~~~~~~~~~~~l~~~~~--------------------d----~~i~iw~~~~~~~~ 244 (515)
-..++++|+...++.+.. | +.|.-+|..+.+..
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 013466676667776553 2 57888888655554
Q ss_pred eEEeecccc--------CceEEEEEe-cCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCccE---------------
Q psy17610 245 LQCVLKEHT--------SSVSVIQIK-SDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPSMI--------------- 297 (515)
Q Consensus 245 ~~~~~~~~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--------------- 297 (515)
.......|. .++. +... .+|+ .++.++.+|.++++|..+++.+........+
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 444333332 1221 2222 4664 6788999999999999999988766543200
Q ss_pred -------------------------------EEEEEcCCCcEEEEEE---------------------------------
Q psy17610 298 -------------------------------MSAAYHPSEVQLITCS--------------------------------- 313 (515)
Q Consensus 298 -------------------------------~~~~~~~~~~~l~~~~--------------------------------- 313 (515)
..++++|+...+++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 1345666655555432
Q ss_pred CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCc
Q psy17610 314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKK 392 (515)
Q Consensus 314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~ 392 (515)
..|.|..||+.+++.+.+..... +...-.....+.+++.++.||.++.||.++|+.+.+++...... .-+.+..+|+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 25789999999999988776542 22111122246678889999999999999999998876543322 2256666776
Q ss_pred EEE
Q psy17610 393 VIV 395 (515)
Q Consensus 393 ~l~ 395 (515)
..+
T Consensus 542 qYv 544 (582)
T 1flg_A 542 QYL 544 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.32 E-value=2.8e-08 Score=86.50 Aligned_cols=249 Identities=10% Similarity=0.013 Sum_probs=158.0
Q ss_pred cEEEEEecCCcEEEEeCCCCce-----eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCC
Q psy17610 137 SSVFATCSKNDIRIWSVRTLNE-----LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNR 210 (515)
Q Consensus 137 ~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~ 210 (515)
++|+.+.. +.|+.++++.... ...+.........+++++++..|+.+. ..+.|..+++.++...... .....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-ECCCC
Confidence 45555553 4788888875432 112222334678899999776666554 5689999999876554433 22335
Q ss_pred CeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---CCcEEEEEcccce
Q psy17610 211 GVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---DGTCVLWDLIKST 286 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~ 286 (515)
....+++++++..|+ +-...+.|.+++++....... ..........++++|++..++.+.. .+.|..+++....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 678999999765555 445567899999863322211 2222245688999997676666554 3678888875433
Q ss_pred EEEEEEc-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610 287 RLIIMIL-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364 (515)
Q Consensus 287 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 364 (515)
....... ......++++|++..|+.+. ..+.|..+|.........+... .....++.. ++.++++...++.|..+
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~--~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL--QYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC--CSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC--CCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 2222212 23578899999877666555 4679999998765443333322 334566664 44455555567899999
Q ss_pred EccCCeeeeeccCCC-CCeeEEEECCCCc
Q psy17610 365 MYREGVPCFVGIGHA-ASITKIKISPDKK 392 (515)
Q Consensus 365 d~~~~~~~~~~~~~~-~~i~~~~~~~~~~ 392 (515)
|..+++.+..+.... .....+++.|++.
T Consensus 235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 235 DLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred eCCCCCceEEEccccccccceeeecCccC
Confidence 999998887775433 2467788887754
No 251
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=9.1e-13 Score=120.53 Aligned_cols=204 Identities=8% Similarity=-0.012 Sum_probs=117.3
Q ss_pred CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE-
Q psy17610 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC- 342 (515)
Q Consensus 264 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~- 342 (515)
++..+++++.|+.|+.||..+++.+..+.. ..+.+..+..++..+++++.++.++.||..+++.+..+..+....+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 577899999999999999999999888876 555555555677777777899999999999998876665432111110
Q ss_pred EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc
Q psy17610 343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS 422 (515)
Q Consensus 343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 422 (515)
..+. ++..+++++.++.++.||.++|+.+..+..+. ...++|++..+++++.|+.|+.||..+++......
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~---- 157 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT---- 157 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEE----
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe----
Confidence 1111 34567788889999999999999887776543 24566788899999999999999988764211100
Q ss_pred eeeecccccccceeeecCcccEEEeeeccCC---cEEEEeecCCeEEEEecCCCeeeeeecccccceE-EEEEEcCCCc
Q psy17610 423 SKISRSTARSTRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV-NCVDFVDDGK 497 (515)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v-~~~~~s~~~~ 497 (515)
.. ......++++. ..+++++.+|.|+.||..+|+.+...... .++ ....++++|.
T Consensus 158 --~~----------------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 158 --YF----------------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA--SPVVAFYVWQREGL 216 (369)
T ss_dssp --EE----------------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS--SCEEEEEECTTSSC
T ss_pred --cc----------------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC--CceEEEEEecCCce
Confidence 00 01122333332 45777888999999999999988777643 344 3345566664
No 252
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.30 E-value=1.1e-06 Score=85.61 Aligned_cols=367 Identities=8% Similarity=-0.043 Sum_probs=204.3
Q ss_pred CcEEEEEEecCCCEEEEE-ecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCce
Q psy17610 82 SGISSLQYNPVNNKVFVG-TVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNE 158 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~ 158 (515)
.....+|+++.++.|+.+ ...+.|.+.+++.. ....+....-.....|++.|.+..|+.+.. .+.|...+++. ..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~ 161 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SS 161 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-Cc
Confidence 568899999966656555 45689999999863 333333334456788999997667777764 35666666653 33
Q ss_pred eEEEE-ecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610 159 LLRIS-VMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236 (515)
Q Consensus 159 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 236 (515)
...+. ..-.....+++++++..|..+. ..+.|...+++........ .........+++..+ ..+++-..++.|...
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHSILAC 239 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEE
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCEEEEE
Confidence 33332 2333468899999877776654 4567999998754433222 211222345666655 344444456778887
Q ss_pred EccCCceee-----------EEeeccc------------cCceEEEEE-----------ecCC--------------CEE
Q psy17610 237 KLTRESQSL-----------QCVLKEH------------TSSVSVIQI-----------KSDS--------------KEA 268 (515)
Q Consensus 237 ~~~~~~~~~-----------~~~~~~~------------~~~v~~~~~-----------~~~~--------------~~l 268 (515)
|..+..... +..+... .+....+++ .|.| +.+
T Consensus 240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~ 319 (619)
T 3s94_A 240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATEL 319 (619)
T ss_dssp ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEE
T ss_pred ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceE
Confidence 764322110 0000000 000111111 1111 112
Q ss_pred EEEeCCCcEEEEEcccceEEE-EEE--cCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610 269 MSASTDGTCVLWDLIKSTRLI-IMI--LPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVD 344 (515)
Q Consensus 269 ~~~~~d~~i~iwd~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 344 (515)
+.-+..+.|+..++....... .+. .-..+..+++.+.+..++.+. ..+.|+.+++........+.. .......++
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~-~~~~p~GlA 398 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA-QIAHPDGIA 398 (619)
T ss_dssp EEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEE
T ss_pred EEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC-CCCCcCceE
Confidence 222223456666665443211 111 123577899998766666554 477888888865443333322 224567889
Q ss_pred EcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC--CCcEEEEeCCCCcCccCCCccc
Q psy17610 345 FVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA--DGGIFLWTFPELEDDVGDSRSL 421 (515)
Q Consensus 345 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~ 421 (515)
+.+ .++++++-...+.|.+.++............-....++++.|....|..+.. ...|...++......
T Consensus 399 vD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~------- 471 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV------- 471 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-------
T ss_pred EecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE-------
Confidence 986 4556666667789999998654332222233456789999997555555543 245555554432110
Q ss_pred ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecCCC
Q psy17610 422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDG 473 (515)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~ 473 (515)
......-...+.+++++++..|..+.. .+.|..+++...
T Consensus 472 -------------~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 472 -------------VLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp -------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred -------------EEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 000111234778999987777766654 467888887543
No 253
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=1.7e-12 Score=118.76 Aligned_cols=203 Identities=11% Similarity=0.057 Sum_probs=116.3
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-c
Q psy17610 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-S 255 (515)
Q Consensus 177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~ 255 (515)
++..+++++.||.|..||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||..+++.. ..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~--w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL--TKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCS--EECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee--eeeeccCccc
Confidence 577899999999999999999999888743 44555555567777888889999999998544332 22222211 1
Q ss_pred eE-EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec
Q psy17610 256 VS-VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG 334 (515)
Q Consensus 256 v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 334 (515)
+. ...+. ++..+++++.++.++.||.++++.+..+..+.. ..++|++..+++++.++.++.||..+++.+..+..
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 10 00111 345677888899999999999988777655442 34566888999999999999999999988766543
Q ss_pred CCCccEEEEEEcCCC---CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCee-EEEECCCCc
Q psy17610 335 SDVAAVNCVDFVDDG---KYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT-KIKISPDKK 392 (515)
Q Consensus 335 ~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~ 392 (515)
.. .....+.++. ..+++++.+|.+..||..+++.+...... .++. ...+++++.
T Consensus 159 ~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGL 216 (369)
T ss_dssp EE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSC
T ss_pred cc---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCce
Confidence 21 1223344332 45777888999999999999888776533 3443 334455553
No 254
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.30 E-value=1.2e-06 Score=85.29 Aligned_cols=410 Identities=10% Similarity=-0.034 Sum_probs=226.4
Q ss_pred EecCCCcEEEEEEecCCCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCC
Q psy17610 77 LLKDDSGISSLQYNPVNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVR 154 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~ 154 (515)
+...-..+..++|++.++.|..+.. .+.|..++++.......+..........+++.+.+..|+.+.. .+.|.+.+++
T Consensus 35 ~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 35 VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp -CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence 3344567889999997777776654 5789999988643223333333356889999997667766655 7889999987
Q ss_pred CCceeEEEE-ecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC
Q psy17610 155 TLNELLRIS-VMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE 230 (515)
Q Consensus 155 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 230 (515)
... ...+. ..-.....+++.|.+..|+.... .+.|...+++........ ...-...+.+++++++..|..+ ...
T Consensus 115 G~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~~P~Glald~~~~~LY~aD~~~ 192 (619)
T 3s94_A 115 GSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIYWPNGLTLDYEEQKLYWADAKL 192 (619)
T ss_dssp SCS-CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCC-EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-eCCCCCCcEEEEEccCCEEEEEeCCC
Confidence 543 33333 33334578899997666666553 467777777654443333 2344567899999976666554 456
Q ss_pred CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC----------------
Q psy17610 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---------------- 294 (515)
Q Consensus 231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------------- 294 (515)
+.|..++++....... ..+.......+++..+ ..+++-...+.|...|..+++....+...
T Consensus 193 ~~I~~~~~dG~~~~~~--~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp 269 (619)
T 3s94_A 193 NFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP 269 (619)
T ss_dssp CCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSC
T ss_pred CeEEEecCCCCccEEE--EeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCC
Confidence 7888888853322221 1111222245566544 33334344567888887655432221100
Q ss_pred ----------ccEEEEEE-----------cC-------CC-------cEEEEEECCCeEEEEeCCCCceE-EEEecCCCc
Q psy17610 295 ----------SMIMSAAY-----------HP-------SE-------VQLITCSTNKMIDYWETCDGSII-RSLEGSDVA 338 (515)
Q Consensus 295 ----------~~~~~~~~-----------~~-------~~-------~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~ 338 (515)
.....+++ .| ++ ..++.-+..+.|+..++...... ..+......
T Consensus 270 ~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~ 349 (619)
T 3s94_A 270 NATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR 349 (619)
T ss_dssp CCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCS
T ss_pred CccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccC
Confidence 00001111 11 11 11222223445666666554321 112222224
Q ss_pred cEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE-EEEeCCCcEEEEeCCCCcCccC
Q psy17610 339 AVNCVDFVDDGK-YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI-VSVSADGGIFLWTFPELEDDVG 416 (515)
Q Consensus 339 ~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~ 416 (515)
.+..++|.+.+. ++++-...+.|+.+++............-.....+++.+.++.| ++-+..+.|.+.++......
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~-- 427 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRK-- 427 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEE--
Confidence 567899998544 44455567889999886543333333333567789998754444 44455678888887643210
Q ss_pred CCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec--CCeEEEEecCCCeeeeeecccccceEEEEEEcC
Q psy17610 417 DSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 494 (515)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 494 (515)
......-.....+++.|....|..... .+.|...++. |.....+........+.|++++
T Consensus 428 ------------------~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l~~P~GlalD~ 488 (619)
T 3s94_A 428 ------------------ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWPNGLALDY 488 (619)
T ss_dssp ------------------EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEET
T ss_pred ------------------EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCCCCCeeeEEcc
Confidence 000011234788999997555554442 3567766654 4333333322235678899998
Q ss_pred CCcEEEEeec-CCeEEEEE
Q psy17610 495 DGKYFLTGGA-DQIVKICL 512 (515)
Q Consensus 495 ~~~~l~s~~~-dg~v~iw~ 512 (515)
+++.|..+.. .+.|...+
T Consensus 489 ~~~~LY~aD~~~~~I~~~~ 507 (619)
T 3s94_A 489 DEGKIYWGDAKTDKIEVMN 507 (619)
T ss_dssp TTTEEEEEETTTTEEEEEE
T ss_pred cCCEEEEEECCCCEEEEEe
Confidence 7766666543 34555544
No 255
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=99.28 E-value=2.9e-06 Score=88.24 Aligned_cols=400 Identities=12% Similarity=0.109 Sum_probs=233.2
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC------CcEEEEEec-CCcEEEEeC
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN------FSSVFATCS-KNDIRIWSV 153 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~~~~~-d~~i~iw~~ 153 (515)
+..|.+.+.+ +.+++.++ ++.+.+++++++.........-...|.|+++.|. ++++++++. |++++|+++
T Consensus 513 ~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 513 AKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 4467777655 35677775 6788888887642221111223567999999763 368888886 999999999
Q ss_pred CCCceeEEEEec-CeEEEEEEEee--CCCEEEEEeCCCeEEEEec--CCCceEEE--ecCCCCCCeEEEEEcCCCCEEEE
Q psy17610 154 RTLNELLRISVM-NMICACIVFTY--DGKAILSGWNDGFIRCFTP--QSGKLKFI--IPNAHNRGVTALAITQDGTRLLS 226 (515)
Q Consensus 154 ~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~--~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~ 226 (515)
.+.+.+....-. .....++.+.. ...+|.+|-.||.+.-+.+ .+|+.... ...+ ..++.-..+...+..-+.
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~ 668 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVF 668 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEE
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEE
Confidence 987766544321 12333444332 3357889999998765544 45554322 2123 345554445444433333
Q ss_pred ecCCCcEEEEEccCCceeeEEeeccccCceE-EEEEecC--CCEEEEEeCCCcEEEEEccc--ceEEEEEEcCccEEEEE
Q psy17610 227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVS-VIQIKSD--SKEAMSASTDGTCVLWDLIK--STRLIIMILPSMIMSAA 301 (515)
Q Consensus 227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~~~~--~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~ 301 (515)
+..+....++.-+ . ..... +-....+. ...|+.. .+-++..+ ++.+++..+.. .-..+.+.....+..++
T Consensus 669 a~s~rp~liy~~~-~--~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~ 743 (1158)
T 3ei3_A 669 ACSDRPTVIYSSN-H--KLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKIC 743 (1158)
T ss_dssp EESSSCEEEEESS-S--SEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEE
T ss_pred EECCCCEEEEEcC-C--ceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEE
Confidence 3334444455432 1 11111 11112232 3334322 23344444 45688887643 33455666777888888
Q ss_pred EcCCCcEEEEEEC-------------------------------------------------CCeEEEEeCCCCceEEEE
Q psy17610 302 YHPSEVQLITCST-------------------------------------------------NKMIDYWETCDGSIIRSL 332 (515)
Q Consensus 302 ~~~~~~~l~~~~~-------------------------------------------------~~~i~~~d~~~~~~~~~~ 332 (515)
++|+.+.++++.. .+.+++.|..+.+.+..+
T Consensus 744 y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~ 823 (1158)
T 3ei3_A 744 YQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAH 823 (1158)
T ss_dssp EEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEE
T ss_pred EcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEE
Confidence 8887776554331 134778888888888887
Q ss_pred ecCCCccEEEEEE---cC-CCCEEEEEc----------CCCeEEEEEccCCeeeee-ccCCCCCeeEEEECCCCcEEEEE
Q psy17610 333 EGSDVAAVNCVDF---VD-DGKYFLTGG----------ADQIVKMWMYREGVPCFV-GIGHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 333 ~~~~~~~i~~~~~---~~-~~~~l~~~~----------~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~ 397 (515)
.......+.+++. .. ...++++|+ ..|.|.+|++..++.... -....+++++++-- +|++|+ +
T Consensus 824 ~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla-~ 901 (1158)
T 3ei3_A 824 QFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLA-S 901 (1158)
T ss_dssp ECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEE-E
T ss_pred eCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEE-E
Confidence 7766566666654 22 246888886 358899999875432221 12346788887643 454444 4
Q ss_pred eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEE--ecCCCee
Q psy17610 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW--ETCDGSI 475 (515)
Q Consensus 398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw--d~~~~~~ 475 (515)
....+++|++...+. +..... ..+ .+..+.....++++++|+.-..|.++ +...+++
T Consensus 902 -ig~~l~vy~l~~~~~-------L~~~~~------------~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L 960 (1158)
T 3ei3_A 902 -INSTVRLYEWTTEKE-------LRTECN------------HYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNF 960 (1158)
T ss_dssp -ETTEEEEEEECTTSC-------EEEEEE------------ECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEE
T ss_pred -cCCEEEEEECCCCce-------EEEEee------------ccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeE
Confidence 346899999865321 000000 000 12222333457889999888777765 4445555
Q ss_pred eeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610 476 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 476 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 513 (515)
...-.......++++.|-.++ .++.+..+|.+.+..+
T Consensus 961 ~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 961 EEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQK 997 (1158)
T ss_dssp EEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEE
T ss_pred EEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEec
Confidence 544444444778899887555 5677899999998876
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.27 E-value=9.6e-09 Score=87.21 Aligned_cols=208 Identities=9% Similarity=-0.018 Sum_probs=140.2
Q ss_pred ceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC--CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610 285 STRLIIMILPSM--IMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360 (515)
Q Consensus 285 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 360 (515)
.+.+..+.++.. ...+.+++++..+++.+. ++.|+++|+.+++.+..+..........+++.. +++.++.-.++.
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 455666666643 689999998644444433 589999999999999998754323334555652 344455566889
Q ss_pred EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL 440 (515)
Q Consensus 361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (515)
+.++|..+.+.+.++..... ....+++|++.|+++..++.|.++|..+.+.... . .....
T Consensus 88 v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~----I--------------~Vg~~ 147 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKK----H--------------NVKYN 147 (266)
T ss_dssp EEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEE----E--------------ECEET
T ss_pred EEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEE----E--------------EECCC
Confidence 99999999988888753311 1244556888788777788999999876531100 0 00000
Q ss_pred ---cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc------------cceEEEEEEcCCCc-EEEEeec
Q psy17610 441 ---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD------------VAAVNCVDFVDDGK-YFLTGGA 504 (515)
Q Consensus 441 ---~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~s~~~~-~l~s~~~ 504 (515)
-..++.+.|. +|...+....++.|.+.|..+++.+..+.... ....+.++|+|+++ +++++..
T Consensus 148 ~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 148 GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 0125677777 67655555567899999999999988876421 13568999999986 4555667
Q ss_pred CCeEEEEEEe
Q psy17610 505 DQIVKICLYI 514 (515)
Q Consensus 505 dg~v~iw~~~ 514 (515)
.+.+.+-++.
T Consensus 227 ~~~v~~i~l~ 236 (266)
T 2iwa_A 227 WPKLFEIKLH 236 (266)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 7888887764
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.26 E-value=1.4e-08 Score=98.05 Aligned_cols=260 Identities=12% Similarity=0.119 Sum_probs=162.4
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccC-cc--CeE-EEEeC---CCCc-EEEEEec------CCcEEEEeCCCCce
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TS--AIY-DLQFP---VNFS-SVFATCS------KNDIRIWSVRTLNE 158 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~--~v~-~~~~~---~~~~-~l~~~~~------d~~i~iw~~~~~~~ 158 (515)
+..+++++.++.|.-+|.++|+.+-...... .. .+. ..... .+++ .+++++. ++.|.-+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 5678888899999999999987765543221 10 111 11111 1233 5555543 78999999999998
Q ss_pred eEEEEecCeEE-----------------------------------------EEEEEeeCCCEEEEEeC-----------
Q psy17610 159 LLRISVMNMIC-----------------------------------------ACIVFTYDGKAILSGWN----------- 186 (515)
Q Consensus 159 ~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~----------- 186 (515)
+.+.......+ ..+++.|+...++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 88664321000 12456667777776663
Q ss_pred ---------C----CeEEEEecCCCceEEEecCC-CC--------CCeEEEEEc-CCCC---EEEEecCCCcEEEEEccC
Q psy17610 187 ---------D----GFIRCFTPQSGKLKFIIPNA-HN--------RGVTALAIT-QDGT---RLLSGGGEGQVRIWKLTR 240 (515)
Q Consensus 187 ---------d----g~i~~~~~~~~~~~~~~~~~-~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iw~~~~ 240 (515)
| +.|..+|.++|+.+..+... |. .++ -+... .+|+ .++.++.+|.++++|..+
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999998887433 21 122 12222 4664 678899999999999865
Q ss_pred CceeeEEeeccc-----------cCc--------------------------------eEEEEEecCCCEEEEEe-----
Q psy17610 241 ESQSLQCVLKEH-----------TSS--------------------------------VSVIQIKSDSKEAMSAS----- 272 (515)
Q Consensus 241 ~~~~~~~~~~~~-----------~~~--------------------------------v~~~~~~~~~~~l~~~~----- 272 (515)
.+......+... ..+ -..++++|+...+++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 433222111100 000 01345666655555432
Q ss_pred ----------------------------CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610 273 ----------------------------TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324 (515)
Q Consensus 273 ----------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~ 324 (515)
.+|.|..||+.+++.+.......+...-.....+..++.++.|+.++.||.+
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECC
Confidence 2578999999999988777665543332233356778889999999999999
Q ss_pred CCceEEEEecCCCccEEEEEEcCCCCEEE
Q psy17610 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFL 353 (515)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 353 (515)
+++.+.++.........-+.+..+|+.++
T Consensus 516 tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 516 SGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp TCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 99999999876422222356666776443
No 258
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=1.2e-08 Score=86.57 Aligned_cols=207 Identities=9% Similarity=0.005 Sum_probs=141.5
Q ss_pred ceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCC
Q psy17610 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDG 275 (515)
Q Consensus 199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~ 275 (515)
+.+.+++.+.......+.|++++...++.+. ++.|.++|+.+.+......+..+ .....+++. ++.++.+ -.++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCC
Confidence 4455663333344689999998754444432 57999999965443322222222 122345554 4455544 4578
Q ss_pred cEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCC
Q psy17610 276 TCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGK 350 (515)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~ 350 (515)
.+.++|..+.+.+..+... .. ...++++++.++++..++.+.++|..+.+.+..+..... ..++.+.+. +|.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 9999999999999888765 32 344666888888877889999999999999888875321 236778888 776
Q ss_pred EEEEEcCCCeEEEEEccCCeeeeeccCC-------------CCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCCC
Q psy17610 351 YFLTGGADQIVKMWMYREGVPCFVGIGH-------------AASITKIKISPDKKVIV-SVSADGGIFLWTFPEL 411 (515)
Q Consensus 351 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~ 411 (515)
.++....++.|.+.|..+++.+..+.-. ......++|+|+++.|+ ++...+.+...++...
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 6666666889999999999887776421 13568999999986555 5556778888887653
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.17 E-value=3.3e-08 Score=88.68 Aligned_cols=237 Identities=10% Similarity=0.091 Sum_probs=147.9
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc------------------CccCeEEEEeCC-CCcEEEEE
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC------------------HTSAIYDLQFPV-NFSSVFAT 142 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------------h~~~v~~~~~~~-~~~~l~~~ 142 (515)
....++++++++++++++..++.|..|+..++......... ....+..+++.+ ++ .|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence 45677889999997888888999999998874322211100 123578999998 55 56666
Q ss_pred ecCCcEEEEeCCCCceeEEEEe--c---CeEEEEEEEee-CCCEEEEEeC-----------------CCeEEEEecCCCc
Q psy17610 143 CSKNDIRIWSVRTLNELLRISV--M---NMICACIVFTY-DGKAILSGWN-----------------DGFIRCFTPQSGK 199 (515)
Q Consensus 143 ~~d~~i~iw~~~~~~~~~~~~~--~---~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~~~~~~~~~ 199 (515)
...+.+..+|..+++ +..+.. . ......+++.+ +|+..++-.. ++.|..+|..+++
T Consensus 98 d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555668888877553 222221 1 12357799999 8876665432 3678889987776
Q ss_pred eEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-----
Q psy17610 200 LKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST----- 273 (515)
Q Consensus 200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 273 (515)
..... ........++++|+++.|..+ ..++.|..|++..........+....+ ...+++.++|++.++...
T Consensus 177 ~~~~~--~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLL--KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEE--EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEec--cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 54322 112334678999999866655 556889999986421111111111123 678899999987666544
Q ss_pred -----CCcEEEEEcccceEEEEEEcCc-----cEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610 274 -----DGTCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSEVQLITCSTNKMIDYWETCD 325 (515)
Q Consensus 274 -----d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~ 325 (515)
.+.|..+|. .++.+..+..+. .+..+++ .++..+++...++.|..+++..
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 456888886 466666665442 3455555 3555555555677788887643
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.16 E-value=3.5e-07 Score=81.25 Aligned_cols=228 Identities=9% Similarity=-0.001 Sum_probs=144.6
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC--CeEEEEeCCCCceEEE
Q psy17610 254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN--KMIDYWETCDGSIIRS 331 (515)
Q Consensus 254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~~~~~~~~ 331 (515)
.....++++++++.+++-..++.|..+|... ...........+..+++.++++.+++.... ..+..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 4567899999988766666788999999865 444455566778999999999966655443 2577788878776543
Q ss_pred EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-eee---------ccCCCCCeeEEEECCCCcEEEEEe-CC
Q psy17610 332 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP-CFV---------GIGHAASITKIKISPDKKVIVSVS-AD 400 (515)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~---------~~~~~~~i~~~~~~~~~~~l~~~~-~d 400 (515)
...........++..+++..+++-..++.|.++|..+++. +.. ....-.....+ +|+++.|+.+. ..
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 3332223345556566665566555688999999865421 110 01111234455 78887665554 56
Q ss_pred CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee--e
Q psy17610 401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--S 478 (515)
Q Consensus 401 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~ 478 (515)
+.|..+++.... ...... .. .. ......++++++|++.++....+.|.++|.. |+... .
T Consensus 189 ~~I~~~~~~~~g-~~~~~~----~~-----------~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 189 MLLLRIPVDSTD-KPGEPE----IF-----------VE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp TEEEEEEBCTTS-CBCCCE----EE-----------EE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred CEEEEEEeCCCC-CCCccE----EE-----------ec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence 789999986421 000000 00 00 0235678999999887777778899999974 66532 3
Q ss_pred ecccccceEEEEEEc---CCCcEEEEeec
Q psy17610 479 LEGSDVAAVNCVDFV---DDGKYFLTGGA 504 (515)
Q Consensus 479 ~~~~~~~~v~~~~~s---~~~~~l~s~~~ 504 (515)
+...- ...++++|. ||++.|..++.
T Consensus 250 ~~~~~-~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 250 AEQGV-IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGGTC-TTEEEEEECCSTTTTTEEEEEEC
T ss_pred ccccc-CCceEEEEecccCCCCEEEEECC
Confidence 33322 568899998 89777666544
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=5.5e-08 Score=81.37 Aligned_cols=193 Identities=11% Similarity=0.050 Sum_probs=132.2
Q ss_pred EEEEEecCCCcE--EEEEEecCCCEEEEEecCc--eEEEEECCCCceeEEeeccCccCeE--EEEeCCCCcEEEEEec-C
Q psy17610 73 TALYLLKDDSGI--SSLQYNPVNNKVFVGTVNC--EIFLIDMNSGFTLTLVNTCHTSAIY--DLQFPVNFSSVFATCS-K 145 (515)
Q Consensus 73 ~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~~~~~-d 145 (515)
+.+...+|+..- ..+.|+ ++.++.+.+.+| .|+++|+++++.+.....+ .... .+++ ++..|..+.. +
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~--~g~~ly~ltw~~ 106 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISD--WKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEE--ETTEEEEEESSS
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEE--eCCEEEEEEeeC
Confidence 445556776554 789998 666566666655 8999999998766655432 2332 3444 3446666554 8
Q ss_pred CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-C---CCeEEEEEcCCC
Q psy17610 146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-N---RGVTALAITQDG 221 (515)
Q Consensus 146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~---~~v~~~~~~~~~ 221 (515)
+.+.++|.++.+.+.++...... ..++++++.|+....++.|.++|.++.+....+.... . ..++.+.|. +|
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 89999999999999998864432 3455788888877778899999999999888775321 1 335667776 67
Q ss_pred CEEEEecCCCcEEEEEccCCceeeEEeeccc----------cCceEEEEEecCCCEEEEEeCC
Q psy17610 222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEH----------TSSVSVIQIKSDSKEAMSASTD 274 (515)
Q Consensus 222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d 274 (515)
+..+..-.+..|.+.|..+........+.+- ....+.|+++|+++.|+..+..
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6665555678899999854433222222211 1345899999999988888764
No 262
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.12 E-value=9e-06 Score=79.19 Aligned_cols=402 Identities=8% Similarity=-0.048 Sum_probs=226.4
Q ss_pred CcEEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee
Q psy17610 82 SGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL 159 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~ 159 (515)
..+..++|++.+..|..+. .++.|..++++.. ....+..........+++.+.+..|+.+.. .+.|.+.+++.....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 4678999999766666554 5689999998763 333333323345778999877667766655 678999998754332
Q ss_pred EEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEE
Q psy17610 160 LRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQVRIW 236 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw 236 (515)
..+...-.....+++.|....|+.... .+.|...+++........ ..-.....++++++++.|..+ ...+.|..+
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE--CCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 222233345688999986666666542 567888888765544333 244567899999976666655 456789999
Q ss_pred EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-c--------------------
Q psy17610 237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-S-------------------- 295 (515)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-------------------- 295 (515)
+++..... .+.........+++.. +..+++-...+.|...|..+++....+... .
T Consensus 194 d~dG~~~~---v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~ 269 (628)
T 4a0p_A 194 NMLGLNRE---VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECA 269 (628)
T ss_dssp ETTSCSCE---EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTT
T ss_pred cCCCCceE---EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEec
Confidence 98643332 2222333445677754 344444444677888886555432222110 0
Q ss_pred ----cEEEEEE-----------------cCCC-------cEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEEEEEc
Q psy17610 296 ----MIMSAAY-----------------HPSE-------VQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNCVDFV 346 (515)
Q Consensus 296 ----~~~~~~~-----------------~~~~-------~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~ 346 (515)
....++. .+++ .+++.+ ....|+-..+..... ...+.......+..++|.
T Consensus 270 ~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s-~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d 348 (628)
T 4a0p_A 270 SSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS-QKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYD 348 (628)
T ss_dssp TTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE-ETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEE
T ss_pred cCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee-ccceEEEEecccccCceEEEEehhcCCceEEEEe
Confidence 0000111 1111 112222 223344443332211 111222222457788998
Q ss_pred CCCCEEEEE-cCCCeEEEEEccCCeeeeeccC------CCCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCCCcCccCCC
Q psy17610 347 DDGKYFLTG-GADQIVKMWMYREGVPCFVGIG------HAASITKIKISPDKKVIV-SVSADGGIFLWTFPELEDDVGDS 418 (515)
Q Consensus 347 ~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~ 418 (515)
+.+..|+.. ...+.|+.++.........+.. ....+..+++.+.++.|. +-+..+.|.+.++.....
T Consensus 349 ~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~----- 423 (628)
T 4a0p_A 349 PLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSV----- 423 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEE-----
T ss_pred cCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeE-----
Confidence 865555544 4567888888754332222222 234678999998766555 555677888887753210
Q ss_pred cccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCC--eEEEEecCCCeeeeeecccccceEEEEEEcCC
Q psy17610 419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 495 (515)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg--~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~ 495 (515)
.......-.....+++.|...+|.... ... .|...++. |.....+........+.|++.++
T Consensus 424 ---------------~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d-G~~~~~l~~~~l~~P~gla~D~~ 487 (628)
T 4a0p_A 424 ---------------GVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSKPIALALDSR 487 (628)
T ss_dssp ---------------EEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT-SCSCEEEECSSCSCEEEEEEETT
T ss_pred ---------------EEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC-CCCcEEEEeccCCCccEEEEeCC
Confidence 001111123478899999544444333 222 56666664 44343333322356789999998
Q ss_pred CcEEEEeec-CCeEEEEE
Q psy17610 496 GKYFLTGGA-DQIVKICL 512 (515)
Q Consensus 496 ~~~l~s~~~-dg~v~iw~ 512 (515)
++.|..+.. .+.|...+
T Consensus 488 ~~~LYw~D~~~~~I~~~~ 505 (628)
T 4a0p_A 488 LGKLFWADSDLRRIESSD 505 (628)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEe
Confidence 776666544 45565544
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.10 E-value=4.3e-07 Score=81.40 Aligned_cols=237 Identities=10% Similarity=0.081 Sum_probs=151.5
Q ss_pred cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEec--------------------CeEEEEEEEeeCCCEEEEE
Q psy17610 125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVM--------------------NMICACIVFTYDGKAILSG 184 (515)
Q Consensus 125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~l~~~ 184 (515)
....+++|++++..+++...++.|..|+..+++. ..+... ......+++.++...|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 3457789999988788888889999999876543 333211 1246789999733356666
Q ss_pred eCCCeEEEEecCCCceEEEec--CC-CCCCeEEEEEcC-CCCEEEEecC-----------------CCcEEEEEccCCce
Q psy17610 185 WNDGFIRCFTPQSGKLKFIIP--NA-HNRGVTALAITQ-DGTRLLSGGG-----------------EGQVRIWKLTRESQ 243 (515)
Q Consensus 185 ~~dg~i~~~~~~~~~~~~~~~--~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iw~~~~~~~ 243 (515)
...+.+..+|..+++...... .+ .......+++.+ +|+..++-.. ++.|..+|......
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 555668889987664322111 11 123478899999 9987665432 36678888643322
Q ss_pred eeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccc---eEEEEEEcCccEEEEEEcCCCcEEEEEEC-----
Q psy17610 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKS---TRLIIMILPSMIMSAAYHPSEVQLITCST----- 314 (515)
Q Consensus 244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 314 (515)
.. +.........++++++++.++.+ ...+.|..+++... ........+. ...+++.++|++.++...
T Consensus 178 ~~---~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 178 TL---LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EE---EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EE---eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 11 11122345679999999866655 45688999998742 2211112334 788999999987776654
Q ss_pred -----CCeEEEEeCCCCceEEEEecCC---CccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 315 -----NKMIDYWETCDGSIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 315 -----~~~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
.+.|..+|. .++.+..+.... ...+..+++ .+++++++...++.|..+++..
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467888887 577777776543 234566666 4666666666778899998754
No 264
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.10 E-value=1.1e-05 Score=78.52 Aligned_cols=399 Identities=10% Similarity=0.010 Sum_probs=217.4
Q ss_pred CcEEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCce
Q psy17610 82 SGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNE 158 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~ 158 (515)
.....+|+++.++.|+.+. ..+.|.+.+++... ...+....-.....+++.|....|+.+.. .+.|...+++...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~- 157 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE- 157 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-
Confidence 3566889998666565544 46789999998643 33333234455789999996667777663 4677777776443
Q ss_pred eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610 159 LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237 (515)
Q Consensus 159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 237 (515)
...+...-.....++++++++.|..+. ..+.|..+++...... .+ .........+++.. +..+++-...+.|...|
T Consensus 158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~-v~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 158 RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE-VI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE-EECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE-Ee-eccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 333333344568899999877777665 4578999998765442 22 22233456777764 44444555567788777
Q ss_pred ccCCceee-E----------Eeeccc-----------cCceEEEEEe-c----------------CC-------CEEEEE
Q psy17610 238 LTRESQSL-Q----------CVLKEH-----------TSSVSVIQIK-S----------------DS-------KEAMSA 271 (515)
Q Consensus 238 ~~~~~~~~-~----------~~~~~~-----------~~~v~~~~~~-~----------------~~-------~~l~~~ 271 (515)
..++.... + ..+... .+....++.. | ++ .+++.+
T Consensus 235 k~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s 314 (628)
T 4a0p_A 235 KTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS 314 (628)
T ss_dssp TTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE
T ss_pred CCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee
Confidence 53222110 0 000000 0011112221 1 11 112211
Q ss_pred eCCCcEEEEEcccceE-EEEEE--cCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEec-----CCCccEEE
Q psy17610 272 STDGTCVLWDLIKSTR-LIIMI--LPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEG-----SDVAAVNC 342 (515)
Q Consensus 272 ~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~ 342 (515)
. ...|+-..+..... ...+. .-..+..++|.+.+..++.+.. .+.|+.++.........+.. .....+..
T Consensus 315 ~-~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~g 393 (628)
T 4a0p_A 315 Q-KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYD 393 (628)
T ss_dssp E-TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEE
T ss_pred c-cceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcce
Confidence 1 22333333322111 01111 1134778899887777666654 67788887754433222322 11246789
Q ss_pred EEEcCCCC-EEEEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEEeC-CC--cEEEEeCCCCcCccCC
Q psy17610 343 VDFVDDGK-YFLTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSVSA-DG--GIFLWTFPELEDDVGD 417 (515)
Q Consensus 343 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~ 417 (515)
+++...++ ++++-+..+.|.+.++.. +....+ ........+|++.|...+|+.... .. .|...++.....
T Consensus 394 lAvD~~~~nLY~td~~~~~I~v~~~~G-~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~---- 468 (628)
T 4a0p_A 394 LSIDIYSRYIYWTCEATNVINVTRLDG-RSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER---- 468 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTS-CEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC----
T ss_pred EEeeccCCeEEEEcCCCCEEEEEECCC-CeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc----
Confidence 99998755 445666778999999854 433333 334466899999994444444433 22 344444432211
Q ss_pred CcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccccceEEEEEEcCCC
Q psy17610 418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 496 (515)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~ 496 (515)
.......-...+.+++.++++.|..+.. .+.|...++. |+....+.........++++.. +
T Consensus 469 ----------------~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~~~~~P~glav~~-~ 530 (628)
T 4a0p_A 469 ----------------EVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDSNILQPVGLTVFE-N 530 (628)
T ss_dssp ----------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCEEEEEEET-T
T ss_pred ----------------EEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcCCCCCcEEEEEEC-C
Confidence 0001111234688999998877776654 5789999984 4444444322224556777654 3
Q ss_pred cEEEEeecCCeEE
Q psy17610 497 KYFLTGGADQIVK 509 (515)
Q Consensus 497 ~~l~s~~~dg~v~ 509 (515)
....+=...+.|.
T Consensus 531 ~ly~tD~~~~~i~ 543 (628)
T 4a0p_A 531 WLYWIDKQQQMIE 543 (628)
T ss_dssp EEEEEETTTTEEE
T ss_pred EEEEEECCCCeEE
Confidence 3333333334443
No 265
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.08 E-value=7e-08 Score=80.77 Aligned_cols=194 Identities=10% Similarity=0.079 Sum_probs=131.9
Q ss_pred eEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCc
Q psy17610 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGT 276 (515)
Q Consensus 200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~ 276 (515)
.+.+++.....-...+.|+ ++.++.+.+.+| .|+.+|+.+.+. .....-. .........++++.++... .++.
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--LQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--EEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--EEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 4555533333345788998 666666666655 899999965443 3333222 2222222333455555544 5789
Q ss_pred EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC----CccEEEEEEcCCCCEE
Q psy17610 277 CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD----VAAVNCVDFVDDGKYF 352 (515)
Q Consensus 277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l 352 (515)
+.++|..+.+.+..+..+..-. .+.++++.|+.+...+.|.++|..+.+.+..+.... ...++.+.+. +|+..
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~--glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGW--GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCC--CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECccCcEEEEEECCCCce--EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 9999999999999998766433 344677888877778899999999999998877532 1334567776 77766
Q ss_pred EEEcCCCeEEEEEccCCeeeeeccCC------------CCCeeEEEECCCCcEEEEEeCC
Q psy17610 353 LTGGADQIVKMWMYREGVPCFVGIGH------------AASITKIKISPDKKVIVSVSAD 400 (515)
Q Consensus 353 ~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~d 400 (515)
+..-.++.|.+.|.++++.+..+.-. ....+.|||+|+++.|+..+..
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 66667889999999999887665321 2356889999988877777653
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=1.2e-07 Score=79.31 Aligned_cols=193 Identities=14% Similarity=0.078 Sum_probs=132.4
Q ss_pred ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCCcE
Q psy17610 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTC 277 (515)
Q Consensus 199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i 277 (515)
+.+.+++.....-...+.|+ ++.+..+.+.+|.|+.+|+.+.+..... +... ..-..+++ +++.++ ..-.++.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~--~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLAS--DGERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEE--CSSCEEEEESSSCEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEE--eCCEEEEEEccCCEE
Confidence 34555543334445788887 4566677788889999999655433332 3221 11123444 444444 44467899
Q ss_pred EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCCEEE
Q psy17610 278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGKYFL 353 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~ 353 (515)
.++|..+.+.+..+..+..-..++ ++++.|+.+..++.|.++|..+.+.+.++..... ..++.+.|. +|+..+
T Consensus 119 ~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence 999999999999998766544444 6688888888899999999999999988875321 245667776 777666
Q ss_pred EEcCCCeEEEEEccCCeeeeeccCC-------------CCCeeEEEECCCCcEEEEEeC
Q psy17610 354 TGGADQIVKMWMYREGVPCFVGIGH-------------AASITKIKISPDKKVIVSVSA 399 (515)
Q Consensus 354 ~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~~~~~ 399 (515)
....++.|.+.|.++++.+..+.-. ....+.||++|+++.|+..+.
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6667889999999999887665321 235689999997766665543
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.03 E-value=6.1e-07 Score=74.47 Aligned_cols=194 Identities=11% Similarity=0.015 Sum_probs=131.9
Q ss_pred ceEEEecCCCCCCeEEEEEcCCCCEEEEecCC--CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCC
Q psy17610 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGE--GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDG 275 (515)
Q Consensus 199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~ 275 (515)
+.+.+++.....-...+.|++ +.+..+.+.+ ..|+.+|+.+.+......+..+. .-..+++ .++.++ ..-.++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~--~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVA--WRDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTEEEEEESSSS
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEE--eCCEEEEEEeeCC
Confidence 345566444445577999986 5555555554 48999999654433333332221 1123343 344444 445678
Q ss_pred cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCCE
Q psy17610 276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGKY 351 (515)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~ 351 (515)
.+.++|..+.+.+..+..+..-..++ +++..|+++..++.|.++|..+.+.+.++..... ..++.+.+. +|+.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 99999999999999998876544444 5677888877899999999999999888875321 345666765 6776
Q ss_pred EEEEcCCCeEEEEEccCCeeeeeccC-------------CCCCeeEEEECCCCcEEEEEeC
Q psy17610 352 FLTGGADQIVKMWMYREGVPCFVGIG-------------HAASITKIKISPDKKVIVSVSA 399 (515)
Q Consensus 352 l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~ 399 (515)
++....+..|.+.|.++++.+..+.- .....+.|+++|+++.|+..+.
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 66666688999999999988766531 1235688999998777766654
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.02 E-value=3.5e-08 Score=97.67 Aligned_cols=271 Identities=12% Similarity=0.019 Sum_probs=155.9
Q ss_pred EEEeCC-CCcEEEEEecCC-----------cEEEEeCCCCce--eEEEEe-cCeEEEEEEEeeCCCEEEEEeC-CCeEEE
Q psy17610 129 DLQFPV-NFSSVFATCSKN-----------DIRIWSVRTLNE--LLRISV-MNMICACIVFTYDGKAILSGWN-DGFIRC 192 (515)
Q Consensus 129 ~~~~~~-~~~~l~~~~~d~-----------~i~iw~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-dg~i~~ 192 (515)
+.++.| +++.++.++.+. .+.+||..+++- +..+.. +.....++++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556667 777777776532 588999987653 223322 1222334677789998888884 458999
Q ss_pred EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CC-----CcEEEEEccCCceeeEEee--ccccCceEEEEEecC
Q psy17610 193 FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GE-----GQVRIWKLTRESQSLQCVL--KEHTSSVSVIQIKSD 264 (515)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 264 (515)
||..+++....-.......-.+++..++++.++.|+ .+ ..+.+||..+......... ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 999887655432112222223556667899999988 34 5689999865544332100 000000000111234
Q ss_pred CCEEEEEeCC---------CcEEEEEcccceEEEEEEcC----------ccEEEEEEc-CCCcEEEEEECCC--------
Q psy17610 265 SKEAMSASTD---------GTCVLWDLIKSTRLIIMILP----------SMIMSAAYH-PSEVQLITCSTNK-------- 316 (515)
Q Consensus 265 ~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~l~~~~~~~-------- 316 (515)
+..++.++.+ ..+..||..+.......... ..-.++.+. .+++.++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 4444555444 35678888766543322211 112334443 3677777777432
Q ss_pred ---eEEEEeCCCCceEEEE--ecCCCccEEEEEEcCCCCEEEEEcCC-----------CeEEEEEccCCeeee--eccCC
Q psy17610 317 ---MIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGAD-----------QIVKMWMYREGVPCF--VGIGH 378 (515)
Q Consensus 317 ---~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~--~~~~~ 378 (515)
.+.+||..+.+-.... ..+....-.++...|++++++.|+.+ ..+.+||..+.+-.. .....
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 6788888776654433 22221223455677899999999854 468999997764322 12222
Q ss_pred CCCeeEEEECCCCcEEEEEeC
Q psy17610 379 AASITKIKISPDKKVIVSVSA 399 (515)
Q Consensus 379 ~~~i~~~~~~~~~~~l~~~~~ 399 (515)
........+.|+++.++.|+.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 222334556799999999885
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.01 E-value=1.3e-06 Score=77.54 Aligned_cols=230 Identities=10% Similarity=-0.009 Sum_probs=140.1
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--cEEEEeCCCC
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--DIRIWSVRTL 156 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~ 156 (515)
........++++|+++++++-..++.|..||.++. .... .. .......+++.++|+.+++....+ .|..++..++
T Consensus 29 p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~-~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 29 PVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIH-AT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEE-EE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEE-Ee-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 33467889999999996666667899999998763 2222 22 234688999999998555443332 4666777777
Q ss_pred ceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce-EEEe--------cCCCCCCeEEEEEcCCCCEEEE
Q psy17610 157 NELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL-KFII--------PNAHNRGVTALAITQDGTRLLS 226 (515)
Q Consensus 157 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~~--------~~~~~~~v~~~~~~~~~~~l~~ 226 (515)
+......... .....++..+++..+++-..++.|..+|..+++. +... ....-...+.+ +++++.|+.
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 6543322111 1223444445544444444588999999876532 1111 00111234555 777776654
Q ss_pred e-cCCCcEEEEEccCC-ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE--EEcC-ccEEEEE
Q psy17610 227 G-GGEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII--MILP-SMIMSAA 301 (515)
Q Consensus 227 ~-~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~-~~~~~~~ 301 (515)
+ ...+.|..+++... .......+.. ......++++++|+++++....+.|.++|.. ++.... +..+ ....+++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 4 55688999998631 1111111111 1345678899999877776667899999975 544322 2233 4588999
Q ss_pred Ec---CCCcEEEEEECC
Q psy17610 302 YH---PSEVQLITCSTN 315 (515)
Q Consensus 302 ~~---~~~~~l~~~~~~ 315 (515)
|. |+++.|+++...
T Consensus 262 ~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECCSTTTTTEEEEEECT
T ss_pred EecccCCCCEEEEECCC
Confidence 98 888877776654
No 270
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=4.2e-07 Score=76.06 Aligned_cols=193 Identities=7% Similarity=-0.041 Sum_probs=130.8
Q ss_pred EEEEEecCCCcE--EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEE
Q psy17610 73 TALYLLKDDSGI--SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIR 149 (515)
Q Consensus 73 ~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~ 149 (515)
+.+...+|+..- ..+.|+ ++.+..+.+.+|.|+++|+++++.+...+. ..---..+++.. ..|..+. .++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~g--~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERL-GNIFAEGLASDG--ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEEC-TTCCEEEEEECS--SCEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECC-CCcceeEEEEeC--CEEEEEEccCCEEE
Confidence 344555676544 788888 455566667778999999999877776632 211123355543 3454444 589999
Q ss_pred EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-C---CCeEEEEEcCCCCEEE
Q psy17610 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-N---RGVTALAITQDGTRLL 225 (515)
Q Consensus 150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~l~ 225 (515)
++|.++++.+.++...... ..++++++.|+.+..++.|.++|.++.+....+.... . ..++.+.|. +|+..+
T Consensus 120 V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EEETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence 9999999999999864432 3444788888888889999999999999888774322 1 245677877 676555
Q ss_pred EecCCCcEEEEEccCCceeeEEeecc-----------ccCceEEEEEecCCCEEEEEeC
Q psy17610 226 SGGGEGQVRIWKLTRESQSLQCVLKE-----------HTSSVSVIQIKSDSKEAMSAST 273 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~ 273 (515)
..-.+..|.+.|..+........+.+ .....+.|+++|+++.|+..+.
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 55567889999985443322222221 1135689999998888777765
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=8e-07 Score=82.65 Aligned_cols=236 Identities=11% Similarity=0.096 Sum_probs=141.9
Q ss_pred cEEEEEEec-CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC-C----cEEEEeCCCC
Q psy17610 83 GISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-N----DIRIWSVRTL 156 (515)
Q Consensus 83 ~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-~----~i~iw~~~~~ 156 (515)
....|+++| ++..|.++...+.|+.+|.+++ .+..+.. .......++|+++++.|+++... + .+...+ ..+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC
Confidence 567899998 4666777766689999999874 4444433 44568899999999977777652 2 233333 333
Q ss_pred cee--EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCc
Q psy17610 157 NEL--LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQ 232 (515)
Q Consensus 157 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~ 232 (515)
... ..+.. ......++++| ++..+++-...+.|..++..++........+.......++|+|+|++| ++-...+.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 322 23332 22346788999 676666666778999999987765332222233457899999999954 44456788
Q ss_pred EEEEEccCCceee--EEeeccc---------------cCceE-EEEEe--------cCCCEEEEEeCCCcEEEEEcccce
Q psy17610 233 VRIWKLTRESQSL--QCVLKEH---------------TSSVS-VIQIK--------SDSKEAMSASTDGTCVLWDLIKST 286 (515)
Q Consensus 233 i~iw~~~~~~~~~--~~~~~~~---------------~~~v~-~~~~~--------~~~~~l~~~~~d~~i~iwd~~~~~ 286 (515)
|..++.+...... ...+.+. -.... .++.. +++.++++-...+.|+.++. .+.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc
Confidence 9998875321111 1111110 01122 44443 23455555455677888873 454
Q ss_pred EEEEEEc---------C---------ccEEEEEEcCC-CcEEEEEECCCeEEEEeC
Q psy17610 287 RLIIMIL---------P---------SMIMSAAYHPS-EVQLITCSTNKMIDYWET 323 (515)
Q Consensus 287 ~~~~~~~---------~---------~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~ 323 (515)
....... . .....+++.|+ +..+++-..+..|+.+++
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 4433322 1 14788899985 555555445667777664
No 272
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.97 E-value=1.9e-06 Score=71.51 Aligned_cols=195 Identities=10% Similarity=0.012 Sum_probs=128.8
Q ss_pred EEEEEecCCC--cEEEEEEecCCCEEEEEecC--ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCc
Q psy17610 73 TALYLLKDDS--GISSLQYNPVNNKVFVGTVN--CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKND 147 (515)
Q Consensus 73 ~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~ 147 (515)
+.+...+|+. -...+.|++ +.++.+.+.. ..|+.+|+++++.+....-...---..+++. +..|.... .++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE
Confidence 4445556764 466899986 4444554544 4899999999876665532221111334443 34555554 4899
Q ss_pred EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCC----CCeEEEEEcCCCCE
Q psy17610 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN----RGVTALAITQDGTR 223 (515)
Q Consensus 148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~ 223 (515)
+.++|.++.+.+.++...... ..+.++++.|+.+..++.|.++|.++.+....+..... ..++.+.+. +|+.
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 999999999999999865433 34456788888877889999999999998877743211 345667776 6665
Q ss_pred EEEecCCCcEEEEEccCCceeeEEeecc-----------ccCceEEEEEecCCCEEEEEeCC
Q psy17610 224 LLSGGGEGQVRIWKLTRESQSLQCVLKE-----------HTSSVSVIQIKSDSKEAMSASTD 274 (515)
Q Consensus 224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~d 274 (515)
.+..-.+..|.+.|..+........+.+ .....+.|+++|+++.|+..+..
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5555567789999985443322222221 12356899999998888887763
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.96 E-value=1.1e-06 Score=81.75 Aligned_cols=254 Identities=8% Similarity=-0.001 Sum_probs=145.4
Q ss_pred ceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCce
Q psy17610 255 SVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSI 328 (515)
Q Consensus 255 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~ 328 (515)
....++++| ++..|+.+...+.|+.+|+..+..............++++++++.|+++... ..+..++. .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 457789998 4566666666588999999877665555555678999999999977766652 13444443 2222
Q ss_pred E--EEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEE-eCCCcE
Q psy17610 329 I--RSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSV-SADGGI 403 (515)
Q Consensus 329 ~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 403 (515)
. ..+.. ......++++| +|.++++-..++.|..++...+...... .+.......++|+|++++|+.+ ...+.|
T Consensus 217 ~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 217 KVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp CSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 1 22222 13456788999 7777777777889999999876542221 1222456789999999955555 456788
Q ss_pred EEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE-Eeeec--------cCCcEEEEeecCCeEEEEecCCCe
Q psy17610 404 FLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM-SAAYH--------PSEVQLITCSTNKMIDYWETCDGS 474 (515)
Q Consensus 404 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s--------~~~~~l~~~~~dg~v~iwd~~~~~ 474 (515)
..++.............+............. .....-.... .++.. ++|.+.++=...+.|+.++ .+|+
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~-~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGV-GKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEE-GGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCC-CcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 8887653211110000000000000000000 0000001122 34443 3455555555667888888 4565
Q ss_pred eeeeecc----c----c--------cceEEEEEEcCC-CcEEEEeecCCeEEEEEE
Q psy17610 475 IIRSLEG----S----D--------VAAVNCVDFVDD-GKYFLTGGADQIVKICLY 513 (515)
Q Consensus 475 ~~~~~~~----~----~--------~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~ 513 (515)
....... . . ......++++|+ +.++++-..++.|+.++.
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 4433211 0 0 125789999994 666666556778887763
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.94 E-value=1.2e-07 Score=95.30 Aligned_cols=240 Identities=11% Similarity=0.060 Sum_probs=134.7
Q ss_pred cEEEEEEe-cCCCEEEEEecC-----ceEEEEECCCC-ceeEEeeccCccCeEEEEeCCCCcEEEEEecC-----CcEEE
Q psy17610 83 GISSLQYN-PVNNKVFVGTVN-----CEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-----NDIRI 150 (515)
Q Consensus 83 ~v~~~~~s-~~~~~l~~~~~d-----~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 150 (515)
.+...+|| |||++||.+... ..|+++|+.++ +.+...+. .....++|+|||+.|+.+..+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 999999876542 35999999997 53221111 123568899999999888775 35888
Q ss_pred EeCCCCce--eEEEEe-cCeEEEEEEEeeCCCEEEEEeC---CCeEEEEecCCCc-eE--EEecCCCCCCeEEEEEcCCC
Q psy17610 151 WSVRTLNE--LLRISV-MNMICACIVFTYDGKAILSGWN---DGFIRCFTPQSGK-LK--FIIPNAHNRGVTALAITQDG 221 (515)
Q Consensus 151 w~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~-~~--~~~~~~~~~~v~~~~~~~~~ 221 (515)
+++.++.. ...+.. .......+.|+|||++|+.... ...|.++|+.++. .. ..+..........+.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88887642 233332 2234567899999999887653 3468888988763 12 33323344555666655444
Q ss_pred CEEEEecCC--C--cEEEEEccCCceeeEEeeccccC--ceEEEEEecCCCE-EEEEeCCCc--EEEEEc-------ccc
Q psy17610 222 TRLLSGGGE--G--QVRIWKLTRESQSLQCVLKEHTS--SVSVIQIKSDSKE-AMSASTDGT--CVLWDL-------IKS 285 (515)
Q Consensus 222 ~~l~~~~~d--~--~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~-l~~~~~d~~--i~iwd~-------~~~ 285 (515)
.+++....+ + .|..+++... ......+..+.. .+..+.+ .++. +++...++. +.++++ ..+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g 408 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAG 408 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEECCTTTSCCCTT
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEecccccccccCC
Confidence 444444433 3 5555665421 111110122333 3344444 4444 455566665 455564 333
Q ss_pred eEEEEEEcCccEEEEEE------cCCCcEE-EEEECC---CeEEEEeCCCCce
Q psy17610 286 TRLIIMILPSMIMSAAY------HPSEVQL-ITCSTN---KMIDYWETCDGSI 328 (515)
Q Consensus 286 ~~~~~~~~~~~~~~~~~------~~~~~~l-~~~~~~---~~i~~~d~~~~~~ 328 (515)
+....+..+.......+ .+++..+ ++.+.. ..+..+|+.+++.
T Consensus 409 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 409 TGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp TCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred ccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 31233333333222333 3455443 333332 4677888877653
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.93 E-value=2.2e-06 Score=72.31 Aligned_cols=203 Identities=12% Similarity=0.082 Sum_probs=130.8
Q ss_pred EEecCCCcEEEEEEecCCCEEE-EEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610 76 YLLKDDSGISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR 154 (515)
Q Consensus 76 ~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 154 (515)
.+.+-...+..++++|+++.|+ +...++.|...|.. +..+..+..+-......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4445667899999999776555 56778999999998 565555433333567889999988655554457889999887
Q ss_pred CCcee---EEEE------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC---CceEEEe------cCCCCCCeEEEE
Q psy17610 155 TLNEL---LRIS------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS---GKLKFII------PNAHNRGVTALA 216 (515)
Q Consensus 155 ~~~~~---~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~---~~~~~~~------~~~~~~~v~~~~ 216 (515)
....+ .... ..+.....++|+|.++.|.++.......+|.+.. ....... ...+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 65432 2222 1123357899999998888877765555665531 1111111 012344678999
Q ss_pred EcCC-CCEEEEecCCCcEEEEEccCCceeeEEeec-cc------cCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610 217 ITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLK-EH------TSSVSVIQIKSDSKEAMSASTDGTCVLWD 281 (515)
Q Consensus 217 ~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 281 (515)
++|. +++++.......+..+|.... ......+. +. -.....+++.++|+..+ .++...++.+.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence 9994 556666777788999997533 23333333 21 13568999999998444 46666555554
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.91 E-value=1.5e-07 Score=93.15 Aligned_cols=239 Identities=10% Similarity=0.102 Sum_probs=141.0
Q ss_pred EEEEee-CCCEEEEEeCCC-----------eEEEEecCCCceE--EEecCCCCCCeEEEEEcCCCCEEEEecC-CCcEEE
Q psy17610 171 CIVFTY-DGKAILSGWNDG-----------FIRCFTPQSGKLK--FIIPNAHNRGVTALAITQDGTRLLSGGG-EGQVRI 235 (515)
Q Consensus 171 ~~~~~~-~~~~l~~~~~dg-----------~i~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i 235 (515)
.+++.+ +++.++.|+.+. .+.+||+.+++.. ...+..+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 888888876542 5889999887642 2332334444456778889999999884 458999
Q ss_pred EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CC-----CcEEEEEcccceEEEEE-----EcCccEEEEEEcC
Q psy17610 236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TD-----GTCVLWDLIKSTRLIIM-----ILPSMIMSAAYHP 304 (515)
Q Consensus 236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~ 304 (515)
||..+........+.... .-..++..++++.++.|+ .+ ..+.+||..+.+-...- .....-....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 998765544443332222 223455667899999888 34 46899999876543321 0000000011223
Q ss_pred CCcEEEEEECC---------CeEEEEeCCCCceEEEEecCCC--------ccEEEEEEc-CCCCEEEEEcCCC-------
Q psy17610 305 SEVQLITCSTN---------KMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFV-DDGKYFLTGGADQ------- 359 (515)
Q Consensus 305 ~~~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~~l~~~~~dg------- 359 (515)
++..++.++.+ ..+..||..+............ ..-.++.+. .++++++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 45555555444 3567888887764433322110 122334443 3788888888542
Q ss_pred ----eEEEEEccCCeeeeec--cCCCCC-eeEEEECCCCcEEEEEeCC-----------CcEEEEeCCC
Q psy17610 360 ----IVKMWMYREGVPCFVG--IGHAAS-ITKIKISPDKKVIVSVSAD-----------GGIFLWTFPE 410 (515)
Q Consensus 360 ----~i~i~d~~~~~~~~~~--~~~~~~-i~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~~ 410 (515)
.+.+||..+..-.... ..+... -.+++..|++++++.++.+ ..+.+||..+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 6778887765433322 112222 2455677899999998864 4577887654
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.89 E-value=2.6e-05 Score=69.26 Aligned_cols=210 Identities=7% Similarity=-0.028 Sum_probs=128.3
Q ss_pred CCCcEEEEEEecCCCEEEEEe-cCceEEEEECCC---CceeEEeeccCccCeEEEEeCCCCcEEEEE-ecCCcEEEEeCC
Q psy17610 80 DDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNS---GFTLTLVNTCHTSAIYDLQFPVNFSSVFAT-CSKNDIRIWSVR 154 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~ 154 (515)
....+..++|+++++.|+.+. .++.|..++.++ +.....+..........+++.+.+..|+.+ ...+.|.+.+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 345678999999766666554 468999999876 122233333233456789998766666655 457889999987
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC--CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCC
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWND--GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEG 231 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~ 231 (515)
.......+.........+++.|.+..|+.+... +.|...+++.... ..+....-...+.+++++++..|..+ ...+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 543333333333456889999977766655542 6888888764433 22322334567899999877666554 4567
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 291 (515)
.|..+|++...................+++. .+..+++-...+.|..++..+++....+
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 8999998643322222211122345677774 3455555556678888887666544443
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.84 E-value=4.6e-05 Score=68.12 Aligned_cols=270 Identities=10% Similarity=0.091 Sum_probs=151.1
Q ss_pred ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE----ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610 124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS----VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199 (515)
Q Consensus 124 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 199 (515)
...+.++.|.+++..++ ++..+.| +...+.|+.=.... .....+..+.|.+ +. +++++..+.|.. ..+.|+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 45789999987665555 5556654 33334343222221 1244688888875 43 444556665543 333344
Q ss_pred eEEEecC--CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610 200 LKFIIPN--AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC 277 (515)
Q Consensus 200 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 277 (515)
.-..... .+...+..+.+.+++..++.+ .++.| |...................+..+.+.+++.+++.+. +|.+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~ 185 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSF 185 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcE
Confidence 4333211 234557788887777666655 45544 3222222223333344556788999999887776554 4444
Q ss_pred EE-EEc--ccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC---CCccEEEEEEcCCCCE
Q psy17610 278 VL-WDL--IKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKY 351 (515)
Q Consensus 278 ~i-wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~ 351 (515)
.. .|- .+-+.+ ....+..+..+.+.+++..+ ..+.+|.+++.+...++.-..+... ....+..+.+.+++.+
T Consensus 186 ~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 186 YSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp EEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred EEEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 33 342 222333 12234568888898988765 4456777776643223332222222 1135788999988887
Q ss_pred EEEEcCCCeEEEEEccCCeeeeecc---CCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610 352 FLTGGADQIVKMWMYREGVPCFVGI---GHAASITKIKISPDKKVIVSVSADGGIFLWT 407 (515)
Q Consensus 352 l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~ 407 (515)
++++. +|.+ .+..+.++.-..+. .....+.++.|.+++. +++++.+|.|.-++
T Consensus 264 ~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 264 WLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 77765 5656 34444454333332 2345678899976555 66667889877665
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=1.6e-05 Score=71.67 Aligned_cols=246 Identities=11% Similarity=0.007 Sum_probs=151.3
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL 159 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~ 159 (515)
....+|.+..+ ..+|+.+. ...|+..+++.. ....... .......++|++.+..|+.+.. .+.|..+++......
T Consensus 33 ~d~~~C~~~~~-~~~ll~~~-~~~I~~i~~~g~-~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGP-EPVLLFAN-RIDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSS-CCEEEEEC-BSCEEEECTTSC-CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCccccccc-CceeEeec-ccceEEEeCCCC-eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 34456777666 44555554 346888888763 4444444 3345789999987667776654 788999998765533
Q ss_pred EEEEecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC-CcEEEE
Q psy17610 160 LRISVMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE-GQVRIW 236 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~iw 236 (515)
..+.........+++.+.+..|+ +-...+.|.+.+++........ ...-.....++++|.+..|+.. ..+ +.|..+
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 33322223446788887655554 4455678999998765443333 3344567899999965555544 344 678888
Q ss_pred EccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEEC
Q psy17610 237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCST 314 (515)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 314 (515)
+++.... .......-.....++++|++..|+.+. ..+.|..+|+........... ......+++ ..+..+++-..
T Consensus 188 ~~dG~~~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 188 SMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp ETTSCSC--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred eCCCCCc--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence 8753221 111222334568899998777766655 457799999865433333322 234567777 34444555555
Q ss_pred CCeEEEEeCCCCceEEEEec
Q psy17610 315 NKMIDYWETCDGSIIRSLEG 334 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~~~~ 334 (515)
.+.|..++..+++....+..
T Consensus 265 ~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 265 TKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp TTEEEEEETTTCCSCEEEEC
T ss_pred CCeEEEEEccCCCccEEecc
Confidence 77788888666666555543
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=4.5e-05 Score=68.78 Aligned_cols=241 Identities=8% Similarity=-0.051 Sum_probs=148.2
Q ss_pred eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEec
Q psy17610 127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIP 205 (515)
Q Consensus 127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~ 205 (515)
.+|.+..++ .+|+.+. ...|+..++........+. .......++|++....|+... ..+.|..+++..+.....+
T Consensus 36 ~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~- 111 (349)
T 3v64_C 36 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV- 111 (349)
T ss_dssp SCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-
T ss_pred CcccccccC-ceeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-
Confidence 445555554 3555443 3558888876554433333 334468899998766666554 5688999998876654444
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEc
Q psy17610 206 NAHNRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDL 282 (515)
Q Consensus 206 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~ 282 (515)
.........+++.+.+. +.++-...+.|.+.+++.... .............++++|.+..++.+.. . +.|...++
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 22334457889987544 445556678899999863322 2222233355689999997666655543 3 67888887
Q ss_pred ccceEEEEEE-cCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610 283 IKSTRLIIMI-LPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360 (515)
Q Consensus 283 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 360 (515)
.......... .-.....++++|++..|+.+. ..+.|..+|+........+... ......+++ ..+.++++-...+.
T Consensus 190 dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~ 267 (349)
T 3v64_C 190 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKS 267 (349)
T ss_dssp TSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-CCCceEEEE-ECCEEEEecCCCCe
Confidence 6433322222 223578999998777766655 4678999998654333333222 245667777 34566666666778
Q ss_pred EEEEEccCCeeeeec
Q psy17610 361 VKMWMYREGVPCFVG 375 (515)
Q Consensus 361 i~i~d~~~~~~~~~~ 375 (515)
|..++..+++....+
T Consensus 268 V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 268 INSANKFTGKNQEII 282 (349)
T ss_dssp EEEEETTTCCSCEEE
T ss_pred EEEEEccCCCccEEe
Confidence 888886566554444
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.84 E-value=6.3e-06 Score=76.59 Aligned_cols=253 Identities=7% Similarity=0.009 Sum_probs=146.5
Q ss_pred ceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC-----eEEEEeCCCCc
Q psy17610 255 SVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-----MIDYWETCDGS 327 (515)
Q Consensus 255 ~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~~~~ 327 (515)
....++++|+ ...|+.+...+.|+.+|..++..............++++++++ |+++...+ .+..++...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 4568899984 4556655554889999998777666555455689999999999 55554321 23344432221
Q ss_pred e-EEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeec-c-CCCCCeeEEEECCCCcEEEEEe-CCCc
Q psy17610 328 I-IRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVG-I-GHAASITKIKISPDKKVIVSVS-ADGG 402 (515)
Q Consensus 328 ~-~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~-~dg~ 402 (515)
. ...+.. ......++++| +|.++++-..++.|+.++..++.....+ . +....-..++|+|++++|..+. ..+.
T Consensus 219 ~~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 219 TERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp CCEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 1 111211 13456788999 7777667667889999998866552222 1 1122234699999999665554 4678
Q ss_pred EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeee---------ccCCcEEEEeecCCeEEEEecCCC
Q psy17610 403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAY---------HPSEVQLITCSTNKMIDYWETCDG 473 (515)
Q Consensus 403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------s~~~~~l~~~~~dg~v~iwd~~~~ 473 (515)
|..+++..................... ..........-.....+++ .++|.+.++-...+.|+.++. +|
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g-~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPG-WVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCC-CBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCc-cCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 888876532211110000000000000 0000000001123567888 677777776667788999984 56
Q ss_pred eeeeeeccc-----------------ccceEEEEEEc-CCCcEEEEeecCCeEEEEEE
Q psy17610 474 SIIRSLEGS-----------------DVAAVNCVDFV-DDGKYFLTGGADQIVKICLY 513 (515)
Q Consensus 474 ~~~~~~~~~-----------------~~~~v~~~~~s-~~~~~l~s~~~dg~v~iw~~ 513 (515)
...... +. .......|+++ ++|.++++=..++.|+.++.
T Consensus 375 ~v~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 375 RVTTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CEEEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 543322 11 01347789999 67777666666788888764
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.83 E-value=7.3e-07 Score=89.53 Aligned_cols=240 Identities=8% Similarity=-0.011 Sum_probs=134.5
Q ss_pred CeEEEEeC-CCCcEEEEEec-CC----cEEEEeCCCC-ceeE-EEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEE
Q psy17610 126 AIYDLQFP-VNFSSVFATCS-KN----DIRIWSVRTL-NELL-RISVMNMICACIVFTYDGKAILSGWND-----GFIRC 192 (515)
Q Consensus 126 ~v~~~~~~-~~~~~l~~~~~-d~----~i~iw~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~ 192 (515)
.+...+|| |||++|+.+.. +| +|+++|+.++ +.+. .+. .....++|+|||+.|+....+ ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998887665 22 4999999998 6322 121 123468899999988877665 36888
Q ss_pred EecCCCce--EEEecCCCCCCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCceee--EEeeccccCceEEEEEecCC
Q psy17610 193 FTPQSGKL--KFIIPNAHNRGVTALAITQDGTRLLSGG---GEGQVRIWKLTRESQSL--QCVLKEHTSSVSVIQIKSDS 265 (515)
Q Consensus 193 ~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 265 (515)
+++.+++. ...+..........+.|+|||++|+..+ ....|.++|+....... .............+.|+. +
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 88887642 2222223334567889999999888655 23467888886442223 333333444555555443 5
Q ss_pred CEEEEEe-CC----CcEEEEEcccc-eEEE-EEEcCc--cEEEEEEcCCCcEEEEEECCCe--EEEEeC-------CCCc
Q psy17610 266 KEAMSAS-TD----GTCVLWDLIKS-TRLI-IMILPS--MIMSAAYHPSEVQLITCSTNKM--IDYWET-------CDGS 327 (515)
Q Consensus 266 ~~l~~~~-~d----~~i~iwd~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~--i~~~d~-------~~~~ 327 (515)
+.|+..+ .+ ..|..+++.+. .... .+.... .+..+.+. .+..+++...++. +.++++ ..++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 5554443 33 25666776642 2122 233332 34445544 2334445555664 556675 3333
Q ss_pred eEEEEecCCCccEEEEEE----cCCCC-EEEEEcCC---CeEEEEEccCCe
Q psy17610 328 IIRSLEGSDVAAVNCVDF----VDDGK-YFLTGGAD---QIVKMWMYREGV 370 (515)
Q Consensus 328 ~~~~~~~~~~~~i~~~~~----~~~~~-~l~~~~~d---g~i~i~d~~~~~ 370 (515)
....+.......+..+.+ ++++. ++++.+.. ..+..+|+.+++
T Consensus 410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 134443322122333432 34554 33333322 457777776654
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.82 E-value=4.9e-05 Score=67.91 Aligned_cols=274 Identities=12% Similarity=0.063 Sum_probs=154.6
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec---cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT---CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT 155 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 155 (515)
+....+.+|.|.+.+..+++| ..|.| +...+.|+.-..... .....+.++.|.+ + .+++++.++.|.. ..+.
T Consensus 33 ~~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 33 PTTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDG 107 (327)
T ss_dssp SCSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESST
T ss_pred CCCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCC
Confidence 345689999998878777754 56655 334444433333221 1244688999986 3 4555566664433 3333
Q ss_pred CceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610 156 LNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232 (515)
Q Consensus 156 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 232 (515)
|+.-..... ....+..+.+.+++..++++ .++.|.. ..+.|+.-.....+....+..+.+.+++.+++.+...+.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 433222221 12345677777777655554 4564432 223344433343456678899999999888877655433
Q ss_pred EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----ccEEEEEEcCCCc
Q psy17610 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYHPSEV 307 (515)
Q Consensus 233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 307 (515)
.+-.|-........ .......+..+.+.+++..+ .++.+|.+++.+...++.-.....+ ..+..+.+.+++.
T Consensus 186 ~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~ 262 (327)
T 2xbg_A 186 YSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE 262 (327)
T ss_dssp EEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred EEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence 33333211222222 22345678888898887654 5566787777643334333333222 2478888988777
Q ss_pred EEEEEECCCeEEEEeCCCCceEEEEecC--CCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610 308 QLITCSTNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 365 (515)
.++++ .++.+ ++....++.-..+... ....+.++.|.+++. +++++.+|.|.-++
T Consensus 263 ~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 263 VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 66655 46666 3444445444434321 124577888876655 55556688776654
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.82 E-value=7.3e-06 Score=69.16 Aligned_cols=200 Identities=10% Similarity=0.111 Sum_probs=135.0
Q ss_pred ecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610 164 VMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242 (515)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 242 (515)
+-...+..++|+|+++.|+ +...++.|...|.. ++....++..-......+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 3345689999999877555 46778889999988 888777754444678899999988877776677889999886443
Q ss_pred e-eeEEee------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc---ceEEEEEEc--------CccEEEEEEcC
Q psy17610 243 Q-SLQCVL------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK---STRLIIMIL--------PSMIMSAAYHP 304 (515)
Q Consensus 243 ~-~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~--------~~~~~~~~~~~ 304 (515)
. ...... .........++++|.++.|+++.+.....+|.+.. ...+..... -..+.+++++|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2 111111 12344568999999998888888766666666541 111222211 12468899999
Q ss_pred CCcE-EEEEECCCeEEEEeCCCCceEEEEecCCC--------ccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 305 SEVQ-LITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 305 ~~~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
.... ++.......+..+|.. ++.+..+..... .....++|.++|+++++ ++.+.++.|.-
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 6554 4555567788899965 556666654421 35688999999985555 66677776654
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.81 E-value=4.9e-05 Score=67.51 Aligned_cols=232 Identities=11% Similarity=-0.013 Sum_probs=142.3
Q ss_pred EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC---CceeEEEE-ecCeEE
Q psy17610 95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT---LNELLRIS-VMNMIC 169 (515)
Q Consensus 95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~---~~~~~~~~-~~~~~v 169 (515)
+|+.+.. ..|+..|+++.. ...+.. .......++|++++..|+.+.. .+.|..+++.. +.....+. ..-...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~-~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSE-YTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECB-SSEEEEETTSCC-CEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECC-CeEEEEECCCcc-eEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 4555544 468999998743 333333 3456789999987767776665 68899999875 12222222 122344
Q ss_pred EEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-C-CcEEEEEccCCceeeE
Q psy17610 170 ACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-E-GQVRIWKLTRESQSLQ 246 (515)
Q Consensus 170 ~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iw~~~~~~~~~~ 246 (515)
..+++.+.+..|+ +-...+.|.+++++........ .........++++|.+..|+.+.. . +.|...+++......
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~- 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS- 157 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-
Confidence 6788887555555 4456789999998765443333 233456789999996665554443 2 678888875322211
Q ss_pred EeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610 247 CVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWE 322 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d 322 (515)
.....-.....+++++++..|+.+. ..+.|..+|+........... ......+++. .+..+++-...+.|..++
T Consensus 158 -~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 158 -LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp -EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred -EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEe
Confidence 1122334568999998877776665 456899999875433333322 1345677774 345555555677888888
Q ss_pred CCCCceEEEEe
Q psy17610 323 TCDGSIIRSLE 333 (515)
Q Consensus 323 ~~~~~~~~~~~ 333 (515)
..+++.+..+.
T Consensus 236 ~~~g~~~~~i~ 246 (316)
T 1ijq_A 236 RLTGSDVNLLA 246 (316)
T ss_dssp TTTCCCCEEEE
T ss_pred CCCCcceEEEe
Confidence 77776655554
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=7.4e-06 Score=76.14 Aligned_cols=237 Identities=11% Similarity=0.070 Sum_probs=140.1
Q ss_pred CcEEEEEEecC--CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC----c-EEEEeCC
Q psy17610 82 SGISSLQYNPV--NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN----D-IRIWSVR 154 (515)
Q Consensus 82 ~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~----~-i~iw~~~ 154 (515)
.....|+++|+ +..|+++...+.|+.+|..++ .+..... .......++++++|. |+++...+ . +...+..
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-YVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-EEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC-EEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 34678999995 555666655589999999875 3443333 445689999999998 66555422 2 3333332
Q ss_pred CCcee-EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEE-EecCC
Q psy17610 155 TLNEL-LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQDGTRLL-SGGGE 230 (515)
Q Consensus 155 ~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~d 230 (515)
.+... ..+. .......++++| ++...++-..++.|+.++..++.....+ ..+....-..++|+|+++.|. +-...
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 22111 1222 222345688899 6665555556788999999877662222 222223345799999998554 44566
Q ss_pred CcEEEEEccCCceee--EEeecc---------------ccCceEEEEE---------ecCCCEEEEEeCCCcEEEEEccc
Q psy17610 231 GQVRIWKLTRESQSL--QCVLKE---------------HTSSVSVIQI---------KSDSKEAMSASTDGTCVLWDLIK 284 (515)
Q Consensus 231 ~~i~iw~~~~~~~~~--~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~d~~i~iwd~~~ 284 (515)
+.|+.++++...... ...+.+ .-.....+++ .+++.++++-...+.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 889998875322211 111111 1123567888 666666666666778888885 4
Q ss_pred ceEEEEEEcC------------------ccEEEEEEc-CCCcEEEEEECCCeEEEEeC
Q psy17610 285 STRLIIMILP------------------SMIMSAAYH-PSEVQLITCSTNKMIDYWET 323 (515)
Q Consensus 285 ~~~~~~~~~~------------------~~~~~~~~~-~~~~~l~~~~~~~~i~~~d~ 323 (515)
+......... .....+++. +++..+++=..++.|+.+++
T Consensus 374 G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 374 GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 5433332110 126778888 45555555455667776664
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=1.3e-05 Score=73.36 Aligned_cols=245 Identities=11% Similarity=0.009 Sum_probs=151.6
Q ss_pred cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEE
Q psy17610 83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLR 161 (515)
Q Consensus 83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~ 161 (515)
.-+|.+..+ ..+|+.+.. ..|+.+++.++ ....+.. .......++|++.+..|+.+.. .+.|..++++.......
T Consensus 78 ~~~C~~~~~-~~~l~~~~~-~~I~~i~~~~~-~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFANR-IDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSS-CCEEEEECB-SCEEEECTTSC-CCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred CCeECCccc-cceeEeecC-ccceeeccCCC-cEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 344666665 445555544 57999998874 3444443 3345789999987667776654 78899999876543333
Q ss_pred EEecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CC-CcEEEEEc
Q psy17610 162 ISVMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GE-GQVRIWKL 238 (515)
Q Consensus 162 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iw~~ 238 (515)
+.........+++.+.+..|+ +-...+.|.+.+++.......+ .........++++|.+..|+... .. +.|..+++
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 322223346788887655555 4445678999988765444333 33445678999998766555443 33 67888887
Q ss_pred cCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCC
Q psy17610 239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNK 316 (515)
Q Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 316 (515)
+.... .......-.....++++|++..|+.+. ..+.|..+|+........... ......+++ ..+..+++-...+
T Consensus 233 dG~~~--~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~ 309 (386)
T 3v65_B 233 DGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTK 309 (386)
T ss_dssp TSCSC--EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCc--EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCC
Confidence 53222 222222334568899998777666554 457799998865433333322 235667777 3445555555677
Q ss_pred eEEEEeCCCCceEEEEecC
Q psy17610 317 MIDYWETCDGSIIRSLEGS 335 (515)
Q Consensus 317 ~i~~~d~~~~~~~~~~~~~ 335 (515)
.|..++..+++....+...
T Consensus 310 ~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 310 SINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EEEEEETTTCCSCEEEECS
T ss_pred eEEEEECCCCcceEEEccC
Confidence 8888887777666666543
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=0.0001 Score=67.73 Aligned_cols=235 Identities=12% Similarity=0.002 Sum_probs=147.1
Q ss_pred CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCC----ceeEEEEecCeE
Q psy17610 94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTL----NELLRISVMNMI 168 (515)
Q Consensus 94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~~~~~~ 168 (515)
.+|+.+. ...|+..+++.. ....+.. ....+..++|++.+..|+.+.. .+.|..+++... .....+......
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~-~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSC-SCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred ceeEEec-cceeEEEccCCc-ceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 4555544 458999999874 3333333 4567889999987777777765 678888988752 222222223345
Q ss_pred EEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceee
Q psy17610 169 CACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSL 245 (515)
Q Consensus 169 v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~ 245 (515)
...+++.+.+..|+ +-...+.|.+.+++.......+ .........+++.|.+..|+... ..+.|...+++....
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~-~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-- 237 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-- 237 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE-ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC--
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE-eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc--
Confidence 67889988555455 4456788999998866544444 33445578999999666665544 236788888753222
Q ss_pred EEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610 246 QCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYW 321 (515)
Q Consensus 246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~ 321 (515)
.......-.....|++++++..|+.+.. .+.|..+|+............ .....+++. .+..+++-...+.|..+
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 316 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEE
Confidence 2222233356789999988777776654 578999998655443333321 245566663 33444455566788888
Q ss_pred eCCCCceEEEEecC
Q psy17610 322 ETCDGSIIRSLEGS 335 (515)
Q Consensus 322 d~~~~~~~~~~~~~ 335 (515)
|..+++.+..+...
T Consensus 317 ~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 317 NRLTGSDVNLLAEN 330 (400)
T ss_dssp ESSSCCCCEEEECS
T ss_pred EcCCCCceEEEecC
Confidence 87777777666543
No 289
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.76 E-value=4e-05 Score=70.18 Aligned_cols=241 Identities=8% Similarity=-0.039 Sum_probs=150.0
Q ss_pred EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecC
Q psy17610 128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPN 206 (515)
Q Consensus 128 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~ 206 (515)
.|.+..++ .+|+.+. ...|+..++.......... .......++|.+.+..|+.. ...+.|..+++..+.....+ .
T Consensus 80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~ 155 (386)
T 3v65_B 80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-S 155 (386)
T ss_dssp CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-C
T ss_pred eECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-e
Confidence 45555553 3555444 4678888887655433333 33456789999866666654 45688999998876654444 2
Q ss_pred CCCCCeEEEEEcCCCCE-EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEcc
Q psy17610 207 AHNRGVTALAITQDGTR-LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDLI 283 (515)
Q Consensus 207 ~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~ 283 (515)
........+++.+.+.. .++-...+.|.+.+++.... .............++++|.+..|+.+.. . +.|...++.
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 23334567889875444 45555667888888753322 2222333356789999987776665544 3 678888876
Q ss_pred cceEEEEEEc-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610 284 KSTRLIIMIL-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361 (515)
Q Consensus 284 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 361 (515)
.......... -.....++++|++..|+.+. ..+.|..+|+........+... ......+++ ..+.++++-...+.|
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~V 311 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKSI 311 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEE-ECCEEEEeeCCCCeE
Confidence 5433333322 23578999998777766655 4678999998654333333322 245677888 445666666777888
Q ss_pred EEEEccCCeeeeecc
Q psy17610 362 KMWMYREGVPCFVGI 376 (515)
Q Consensus 362 ~i~d~~~~~~~~~~~ 376 (515)
..++..+++....+.
T Consensus 312 ~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 312 NSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEECCCCcceEEEc
Confidence 888866666555543
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.73 E-value=5.5e-05 Score=67.03 Aligned_cols=233 Identities=9% Similarity=-0.040 Sum_probs=142.2
Q ss_pred EEEEEecCCcEEEEeCCCCc-eeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEE
Q psy17610 138 SVFATCSKNDIRIWSVRTLN-ELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL 215 (515)
Q Consensus 138 ~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~ 215 (515)
+|+.+. ...|+..+++... ....+.........+.|.+.+..|... ...+.|..+++..+.....+....-.....+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 444443 4678899988764 222222223356689999866655544 4567899999877642111111222346688
Q ss_pred EEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC--CCcEEEEEcccceEEEEEE
Q psy17610 216 AITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--DGTCVLWDLIKSTRLIIMI 292 (515)
Q Consensus 216 ~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~ 292 (515)
++.+. +.+.++-...+.|.+++++...... ...........+++.|.+..++.+.. .+.|...++..........
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 99874 4445555667889999986332222 22233455689999997666666653 5778888875433222222
Q ss_pred c-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610 293 L-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV 370 (515)
Q Consensus 293 ~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 370 (515)
. -.....++++|++..|+.+. ..+.|..+|+..... +.+..........+++.. +.++.+-...+.|..++..+++
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 2 23578999999777776665 467899999864333 333222224566777753 4556666667889989887776
Q ss_pred eeeec
Q psy17610 371 PCFVG 375 (515)
Q Consensus 371 ~~~~~ 375 (515)
....+
T Consensus 241 ~~~~i 245 (318)
T 3sov_A 241 GLREI 245 (318)
T ss_dssp SCEEE
T ss_pred ceEEE
Confidence 54444
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.68 E-value=0.00021 Score=65.71 Aligned_cols=234 Identities=11% Similarity=-0.002 Sum_probs=146.3
Q ss_pred EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCC----ceEEEecCCCCCCe
Q psy17610 138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSG----KLKFIIPNAHNRGV 212 (515)
Q Consensus 138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~----~~~~~~~~~~~~~v 212 (515)
+|+.+ ....|+..++........+ .....+..++|++.+..|+.+. ..+.|..+++... .....+ .......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCCc
Confidence 44444 4578888898866544433 3445678899998776666554 5678988988752 222223 3344567
Q ss_pred EEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC--CCcEEEEEcccceEEE
Q psy17610 213 TALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--DGTCVLWDLIKSTRLI 289 (515)
Q Consensus 213 ~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~ 289 (515)
..+++.+ .+++.++-...+.|.+.+++.... ...+.........++++|.+..|+.+.. .+.|...++.......
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 8999998 454555556678899998853322 2222333445789999997776666553 3678888886544333
Q ss_pred EEEcC-ccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 290 IMILP-SMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 290 ~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
..... .....+++++++..|+.+.. .+.|..+|+............ .......+++. .+.++++-...+.|..+|.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 33322 46789999998877776654 678999998654433333321 12345567763 3455666666778888887
Q ss_pred cCCeeeeeccC
Q psy17610 367 REGVPCFVGIG 377 (515)
Q Consensus 367 ~~~~~~~~~~~ 377 (515)
.+++.+..+..
T Consensus 319 ~~G~~~~~i~~ 329 (400)
T 3p5b_L 319 LTGSDVNLLAE 329 (400)
T ss_dssp SSCCCCEEEEC
T ss_pred CCCCceEEEec
Confidence 77766555543
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.68 E-value=5.4e-05 Score=67.06 Aligned_cols=234 Identities=9% Similarity=0.035 Sum_probs=143.1
Q ss_pred EEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee-EEEEecCeEEEE
Q psy17610 95 KVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL-LRISVMNMICAC 171 (515)
Q Consensus 95 ~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~-~~~~~~~~~v~~ 171 (515)
+|+.+. ...|+..+++... ....... .......++|++.+..|+.+.. .+.|..+++..+... ..+...-.....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 455544 4579999998753 2222222 2345678999986666666654 778999998766422 222222234567
Q ss_pred EEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEe
Q psy17610 172 IVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCV 248 (515)
Q Consensus 172 ~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~ 248 (515)
+++.+.+..|+ +-...+.|.+++++........ .........+++.|.+..|+... ..+.|...+++..... ..
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~ 160 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--II 160 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE--EE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE--EE
Confidence 88887555554 4455678999998765443333 34445678999998666665554 3577888887532221 11
Q ss_pred eccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610 249 LKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~ 326 (515)
....-.....+++++++..|+.+. ..+.|..+|+.......... .......+++.. +..+.+-...+.|..++..++
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 222234568899999777766654 45789999986433332222 223456677653 344445555778888888777
Q ss_pred ceEEEEec
Q psy17610 327 SIIRSLEG 334 (515)
Q Consensus 327 ~~~~~~~~ 334 (515)
+....+..
T Consensus 240 ~~~~~i~~ 247 (318)
T 3sov_A 240 EGLREIHS 247 (318)
T ss_dssp CSCEEEEC
T ss_pred CceEEEeC
Confidence 76655544
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=5.3e-05 Score=70.46 Aligned_cols=253 Identities=10% Similarity=0.032 Sum_probs=142.7
Q ss_pred ceEEEEEec-CCCEEEEEe-CCCcEEEEEcccceEEEEEEcCc----cEEEEEE-------cCCCcEEEEEECCC-----
Q psy17610 255 SVSVIQIKS-DSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPS----MIMSAAY-------HPSEVQLITCSTNK----- 316 (515)
Q Consensus 255 ~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~~~~~~~----- 316 (515)
....|+|+| +...|+.+. ..+.|++.|+..+.......... ....++| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 457889998 344444444 34678889988877666554432 4889999 99999777776654
Q ss_pred --eEEEEeCCC-CceE-----EEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEcc-------CCee---------
Q psy17610 317 --MIDYWETCD-GSII-----RSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYR-------EGVP--------- 371 (515)
Q Consensus 317 --~i~~~d~~~-~~~~-----~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~--------- 371 (515)
.+.+++... +... ..+... .....++++| ++.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 366665433 1221 222211 2345778999 56666677788899999997 4443
Q ss_pred -----eeeccCCCCCeeEEEECCCCcEEEEE-eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE
Q psy17610 372 -----CFVGIGHAASITKIKISPDKKVIVSV-SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM 445 (515)
Q Consensus 372 -----~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 445 (515)
+... +.......++|+|++++|..+ .....|+.++.............+............... ...-....
T Consensus 298 g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~-~a~f~~P~ 375 (496)
T 3kya_A 298 NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT-EARMNNPC 375 (496)
T ss_dssp TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG-GCBCSSEE
T ss_pred cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc-ccccCCCe
Confidence 1112 223446799999999965555 456678876654321110000000000000000000000 00001133
Q ss_pred -Eeeec-------cCCcEEEEeecCCeEEEEecCCCeeeeeeccc-----------------------ccceEEEEEEcC
Q psy17610 446 -SAAYH-------PSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-----------------------DVAAVNCVDFVD 494 (515)
Q Consensus 446 -~~~~s-------~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------------------~~~~v~~~~~s~ 494 (515)
.++.. +++.+.++=..+..|+.++ .+|.. .++.+. .......|++++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 34443 4566666666778899998 45643 333221 013467899999
Q ss_pred C-CcEEEEeecCCeEEEEEE
Q psy17610 495 D-GKYFLTGGADQIVKICLY 513 (515)
Q Consensus 495 ~-~~~l~s~~~dg~v~iw~~ 513 (515)
+ |.+.++=..+..||.++.
T Consensus 454 ~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEC
Confidence 7 776666566788888764
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.67 E-value=2.6e-05 Score=68.32 Aligned_cols=194 Identities=13% Similarity=0.213 Sum_probs=129.9
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC----CCE--EE--EecC--CCcEEEEEccCCceeeE
Q psy17610 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD----GTR--LL--SGGG--EGQVRIWKLTRESQSLQ 246 (515)
Q Consensus 177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~--~~~~--d~~i~iw~~~~~~~~~~ 246 (515)
....++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+. ++ +.-. +++|.+|+++..... .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 3456666677888999999 7888887732 45666666552 222 23 3333 578999987533322 2
Q ss_pred Eeec-------cccCceEEEEE--ecC-CC-EEEEEeCCCcEEEEEc-------ccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610 247 CVLK-------EHTSSVSVIQI--KSD-SK-EAMSASTDGTCVLWDL-------IKSTRLIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 247 ~~~~-------~~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~iwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (515)
..+. .....+..+++ +|. ++ +++....+|.+..|++ .+.+.++.+...+.+..+...+....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 2221 11145666777 664 43 5788888999999998 35577888899999999999999999
Q ss_pred EEEEECCCeEEEEeCC-----CCceEEEEecC-CCccEEEEEE--cCCCC-EEEEEc-CCCeEEEEEcc-CCeeeeec
Q psy17610 309 LITCSTNKMIDYWETC-----DGSIIRSLEGS-DVAAVNCVDF--VDDGK-YFLTGG-ADQIVKMWMYR-EGVPCFVG 375 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~-----~~~~~~~~~~~-~~~~i~~~~~--~~~~~-~l~~~~-~dg~i~i~d~~-~~~~~~~~ 375 (515)
|+++-++..|..++.. +++.+..+... -...+..|++ .++++ +|++.+ .++...+||.+ +.+.+..+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 9999999888888855 34455444322 2236777877 45555 666655 56799999996 44444444
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.57 E-value=0.00025 Score=60.84 Aligned_cols=263 Identities=9% Similarity=0.073 Sum_probs=166.4
Q ss_pred CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (515)
++.+|.+.|+............+ .+.-.+|..+.++.-. ..++.++|+++.+.+.....+.++.--.|-.+...
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L 120 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV 120 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEE
T ss_pred CCCEEEEEECCCCCCcccccccc-----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeE
Confidence 34478888987554433332222 2334578877766655 67899999999999999999999888888766554
Q ss_pred EEEEECCCeEEEEeCCC-CceEEEEecCC---CccEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCCeeeeeccC
Q psy17610 309 LITCSTNKMIDYWETCD-GSIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGA-------DQIVKMWMYREGVPCFVGIG 377 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~~-~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~ 377 (515)
-++. +..++-|++.. ..+.+.+..+. ...|.....+++.++++..+- .|.+.+|..+.+ ..+.+.+
T Consensus 121 ~lVT--~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieG 197 (365)
T 2xzh_A 121 ALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG 197 (365)
T ss_dssp EEEE--SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECC
T ss_pred EEEc--CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeee
Confidence 4443 45799999875 35555565442 256777788899998775432 367889988654 4455677
Q ss_pred CCCCeeEEEECC---CCcEEEEEeC---CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610 378 HAASITKIKISP---DKKVIVSVSA---DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP 451 (515)
Q Consensus 378 ~~~~i~~~~~~~---~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 451 (515)
|...-..+.+.. ...+++.+.. .+.+++-++....... .....+.. ..........+...++..|+
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~---~~f~kk~v-----di~fppea~~DFPVamqvs~ 269 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPKKAV-----DVFFPPEAQNDFPVAMQISE 269 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC---CCCCCEEE-----EECCCTTCTTCCEEEEEEET
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC---CCcccccc-----eeeCCccccCCceEEEEecc
Confidence 765544333321 1223443332 2589999885531111 11111000 00111112345577889999
Q ss_pred CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610 452 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK 509 (515)
Q Consensus 452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 509 (515)
....+...+.-|.+++||+++|.++..-+-.. ..|..-+-..+..-++.....|.|.
T Consensus 270 kygviyviTK~G~ihlyDleTgt~i~~nrIS~-d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 270 KHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred cCCEEEEEeCCcEEEEEEcccCcEEEEeccCC-CceEEecccCCCCcEEEEcCCCEEE
Confidence 99999999999999999999999987766544 5665555544444455555666553
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.56 E-value=0.00016 Score=67.33 Aligned_cols=245 Identities=9% Similarity=0.015 Sum_probs=141.7
Q ss_pred cEEEEEEec-CCCEEEEEec-CceEEEEECCCCceeEEeeccC---ccCeEEEEe-------CCCCcEEEEEecCC----
Q psy17610 83 GISSLQYNP-VNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCH---TSAIYDLQF-------PVNFSSVFATCSKN---- 146 (515)
Q Consensus 83 ~v~~~~~s~-~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~~~~~d~---- 146 (515)
....|+|+| ++..|+++.. .+.|++.|.+++ .+..+.... ......++| ++++.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899999 4555555544 478999999884 444443322 235889999 99998788877643
Q ss_pred ---cEEEEeCCC-Ccee-----EEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecC-------CCce---------
Q psy17610 147 ---DIRIWSVRT-LNEL-----LRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQ-------SGKL--------- 200 (515)
Q Consensus 147 ---~i~iw~~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~-------~~~~--------- 200 (515)
.|.+.+... ++.. ..+.... ....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665443 2221 2333222 3356788995 4555556677889999987 5543
Q ss_pred --EEE-ecCCCCCCeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceee--EEeeccc---c------------CceE-E
Q psy17610 201 --KFI-IPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSL--QCVLKEH---T------------SSVS-V 258 (515)
Q Consensus 201 --~~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~--~~~~~~~---~------------~~v~-~ 258 (515)
... +..+.......++|+|+|+.|. +-...+.|+.++.+...... ...+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 111 2223344568999999999544 44567888887765332211 0111111 0 1233 3
Q ss_pred EEEe-------cCCCEEEEEeCCCcEEEEEcccceEEEEEEc---------------C---------ccEEEEEEcCC-C
Q psy17610 259 IQIK-------SDSKEAMSASTDGTCVLWDLIKSTRLIIMIL---------------P---------SMIMSAAYHPS-E 306 (515)
Q Consensus 259 ~~~~-------~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------~---------~~~~~~~~~~~-~ 306 (515)
+... +++.++++=.....|+.++ .++........ . .....+++.++ +
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 4444 4555555556677888888 34543332221 0 12567788876 5
Q ss_pred cEEEEEECCCeEEEEeCCCCceEE
Q psy17610 307 VQLITCSTNKMIDYWETCDGSIIR 330 (515)
Q Consensus 307 ~~l~~~~~~~~i~~~d~~~~~~~~ 330 (515)
..+++=..+..|+.+++.......
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC---
T ss_pred EEEEEeCCCCEEEEEECCCCcccc
Confidence 555555556677777766554443
No 297
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.45 E-value=0.0019 Score=65.19 Aligned_cols=400 Identities=10% Similarity=0.013 Sum_probs=220.8
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEee-ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN-TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL 159 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 159 (515)
...|.++.-..+|. |..|+.+| +..||-.. ....... ......|.++...+++ .|..++.+| +..+|..+.+..
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~-~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYS-TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSC-EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCc-eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence 56799999988775 66777776 66777543 1111000 1123468888877776 566666554 788998765432
Q ss_pred EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610 160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236 (515)
Q Consensus 160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 236 (515)
.........|.++.. .++ .|..++.+ -+..+|..+++...... ......|.++...+++.+.+ |+.+ -+..+
T Consensus 96 ~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~ 170 (758)
T 3ott_A 96 QPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRY 170 (758)
T ss_dssp CCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEE
T ss_pred CcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhC
Confidence 110111224666543 454 56667666 58888987766543211 11235688888888887555 4444 47778
Q ss_pred EccCCceeeEEeecc----ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEE
Q psy17610 237 KLTRESQSLQCVLKE----HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLIT 311 (515)
Q Consensus 237 ~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 311 (515)
+......... .... ....|.++...+++..|..++. +-+..+|..+++...... ....+.++...+++...+.
T Consensus 171 ~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 171 IPSNGKFEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG 248 (758)
T ss_dssp ETTTTEEEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE
T ss_pred ccCCCceEEe-cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE
Confidence 7643322111 1111 1224778877777776666664 458888887665432221 2235778888877776655
Q ss_pred EECCCeEEEEeCCCCceEEEEec------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc-----CCCC
Q psy17610 312 CSTNKMIDYWETCDGSIIRSLEG------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-----GHAA 380 (515)
Q Consensus 312 ~~~~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~ 380 (515)
. . +-+.+++..+++...-... -....|.++....+|. |-.|+..| +.++............ ....
T Consensus 249 T-~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~ 324 (758)
T 3ott_A 249 T-D-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGN 324 (758)
T ss_dssp E-T-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCC
T ss_pred e-C-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCc
Confidence 4 4 4578888776654322111 1124588888888776 44555566 4444332211111110 1234
Q ss_pred CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee
Q psy17610 381 SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS 460 (515)
Q Consensus 381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 460 (515)
.|.++.-.++|.+.+ |+.+| +..++........ ... . ..... . .......|.++.-.++|++.+ |+
T Consensus 325 ~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~-----~~~-~-~~~~~--~--~~l~~~~v~~i~~d~~g~lWi-gt 390 (758)
T 3ott_A 325 QFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHD-----AIW-Y-RMGDK--T--YPLSHNRIRHIYEDKEQQLWI-AT 390 (758)
T ss_dssp BEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCC-----CEE-E-CTTCS--S--SCCSCSCEEEEEECTTSCEEE-EE
T ss_pred eEEEEEEcCCCCEEE-eeCCc-ceeecccccccce-----eEE-e-ccCCc--C--CCCCCCceEEEEECCCCCEEE-Ee
Confidence 688888888887655 44554 6666654321100 000 0 00000 0 001123478888888887554 34
Q ss_pred cCCeEEEEecCCCeeeeeec-cc----ccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 461 TNKMIDYWETCDGSIIRSLE-GS----DVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 461 ~dg~v~iwd~~~~~~~~~~~-~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
++-+..||..+++...-.. .. ....|.++...++|++.+ |+..+-+.+++
T Consensus 391 -~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~ 445 (758)
T 3ott_A 391 -DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVD 445 (758)
T ss_dssp -TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEE
T ss_pred -CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEc
Confidence 3469999988776543211 11 114688888888887555 44443355554
No 298
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.45 E-value=0.0019 Score=65.15 Aligned_cols=391 Identities=13% Similarity=0.035 Sum_probs=213.1
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 161 (515)
..|.++...+++..|..|+. +-+..+|..++. ......-....|.++...++|...+. +. +-+.+++..+++. ..
T Consensus 191 ~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~-~~ 265 (758)
T 3ott_A 191 LFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ-IKQTEAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPL-QH 265 (758)
T ss_dssp CCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE-EEEEEEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCC-EE
T ss_pred ceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe-EEeccCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcE-EE
Confidence 34889988888877777775 458889987743 32221113346888888888755544 44 4588888776543 22
Q ss_pred EEe--------cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCeEEEEEcCCCCEEEEecC
Q psy17610 162 ISV--------MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 162 ~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~ 229 (515)
+.. ....|.++....+|. |-.|+..| +.++.....-...... ......|.++.-.++|.+-+ |+.
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~ 342 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGA 342 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EET
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeC
Confidence 221 123588887777776 55566667 5444332211111110 11234688888888887554 455
Q ss_pred CCcEEEEEccCCceeeEEeec-------cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-------cCc
Q psy17610 230 EGQVRIWKLTRESQSLQCVLK-------EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-------LPS 295 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~ 295 (515)
+| +..++...........+. -....|.++.-.+++.. ..|+ ++-+..+|..+++...... ...
T Consensus 343 ~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (758)
T 3ott_A 343 NG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQL-WIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTN 419 (758)
T ss_dssp TE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCE-EEEE-TTEEEEEETTTTEEEEEEEECCC--CBSS
T ss_pred Cc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCE-EEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCc
Confidence 55 555654321111111111 01235788877777664 4455 4568999987765443321 112
Q ss_pred cEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-----ceE---EEEec---CCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610 296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDG-----SII---RSLEG---SDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-----~~~---~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 364 (515)
.+.++...+++... .|+..+-+..+|..+. ... ..+.. .....|.++...++|++-+.++..+-+..+
T Consensus 420 ~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~ 498 (758)
T 3ott_A 420 WTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKI 498 (758)
T ss_dssp SEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEE
T ss_pred eEEEEEEcCCCCEE-EEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEE
Confidence 47777777776644 4666666788875421 111 11111 112358889999888866533333447788
Q ss_pred EccCCeeeeeccC---CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610 365 MYREGVPCFVGIG---HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP 441 (515)
Q Consensus 365 d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (515)
|..+++....... ....+.++....+|.+.+. +.. -+..++............. ...
T Consensus 499 d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~g------------------l~~ 558 (758)
T 3ott_A 499 NPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQSISFGS------------------FSN 558 (758)
T ss_dssp ETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCCBCCCCC---------------------
T ss_pred eCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceEEecccC------------------CCc
Confidence 9877654432111 1346788888888876654 444 4778876543211100000 011
Q ss_pred ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEE-cCCCcEEEEeecCCeEEE
Q psy17610 442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF-VDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~v~i 510 (515)
..|.++... +|. |-.++.+| +..+|..+.+... +.... ..+....+ .++|+ |..|+.+|.+.+
T Consensus 559 ~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~G~-l~fG~~~Gl~~f 622 (758)
T 3ott_A 559 NEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDARQ-QNMTN-KRFTSLLFDPKEDC-VYLGGADGFGIS 622 (758)
T ss_dssp CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCCEEE-C--CC-CCCSEEEEETTTTE-EEEECBSEEEEE
T ss_pred cceEEEEEC-CCC-EEEECCCC-eEEEcCCCceeEE-ecCCC-CceeeeEEECCCCc-EEEecCCceEEE
Confidence 236666653 554 44455566 7788887765432 11111 22333444 35665 556777885543
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.41 E-value=0.00035 Score=61.27 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=125.5
Q ss_pred CCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeC----CCE--EE-EEeC---CCeEEEEec--CCCceEE
Q psy17610 135 NFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD----GKA--IL-SGWN---DGFIRCFTP--QSGKLKF 202 (515)
Q Consensus 135 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~-~~~~---dg~i~~~~~--~~~~~~~ 202 (515)
....++.+...+-+.++|+ +|+.++.+.. +.+..+..-|+ |+. ++ +... +++|.+|++ .+++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3356677777889999999 8898888753 44566665552 322 33 3333 578999966 4444 33
Q ss_pred EecC---C--CC-CCeEEEEE--cCC-CC-EEEEecCCCcEEEEEccCC-----ceeeEEeeccccCceEEEEEecCCCE
Q psy17610 203 IIPN---A--HN-RGVTALAI--TQD-GT-RLLSGGGEGQVRIWKLTRE-----SQSLQCVLKEHTSSVSVIQIKSDSKE 267 (515)
Q Consensus 203 ~~~~---~--~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~ 267 (515)
.+.. + .. ..+..+++ +|. +. ++++...+|.+..|++... +.+.+..+.. .+.+..+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 3311 1 11 45666777 774 43 6778888899999998431 2344445443 457888899998999
Q ss_pred EEEEeCCCcEEEEEcc-----cceEEEEEEcC---ccEEEEEE--cCCCc-EEEEEE-CCCeEEEEeCC-CCceEEEEe
Q psy17610 268 AMSASTDGTCVLWDLI-----KSTRLIIMILP---SMIMSAAY--HPSEV-QLITCS-TNKMIDYWETC-DGSIIRSLE 333 (515)
Q Consensus 268 l~~~~~d~~i~iwd~~-----~~~~~~~~~~~---~~~~~~~~--~~~~~-~l~~~~-~~~~i~~~d~~-~~~~~~~~~ 333 (515)
|+.+-++.-|..++.+ +.+.+...... ..+..+++ .++++ +|++++ .+..+.+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999998766666644 23444444333 35788887 45555 666666 46799999986 555555554
No 300
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.39 E-value=0.00078 Score=57.86 Aligned_cols=255 Identities=9% Similarity=0.093 Sum_probs=159.8
Q ss_pred CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181 (515)
Q Consensus 102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 181 (515)
+.+|.|.|+.++..+.+....-. +.-.+|..+.++.- ...++.|+|+++.+.++...-.+ .|..=.|-.+ +.|
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALr-ag~~LQiFnletK~klks~~~~e-~VvfWkWis~-~~L 120 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTV 120 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEEECSS-CEEEEEECSS-SEE
T ss_pred CCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEe-cCCeEEEechHHhhhhcceecCC-ccEEEEecCC-CeE
Confidence 34799999998766544322222 33458886544444 47889999999998888887554 5555556544 345
Q ss_pred EEEeCCCeEEEEecCCC-ceEEEecCCC----CCCeEEEEEcCCCCEEEEec-------CCCcEEEEEccCCceeeEEee
Q psy17610 182 LSGWNDGFIRCFTPQSG-KLKFIIPNAH----NRGVTALAITQDGTRLLSGG-------GEGQVRIWKLTRESQSLQCVL 249 (515)
Q Consensus 182 ~~~~~dg~i~~~~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~ 249 (515)
+..+ +..|.-|+++.. .+...+ ..| ...|..-..+++.++++..+ -.|.+.+|..++ ...+.+
T Consensus 121 ~lVT-~taVyHWs~~~~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~i 195 (365)
T 2xzh_A 121 ALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPI 195 (365)
T ss_dssp EEEE-SSEEEEEESSTTCCCEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT---TEEEEE
T ss_pred EEEc-CCcEEEEcccCCCCCceee-ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc---ccccee
Confidence 5554 456999999753 344444 222 34577777788888877543 237889999753 345566
Q ss_pred ccccCceEEEEEecC---CCEEEEEeC---CCcEEEEEcccc--------eEEEEEEcC-----ccEEEEEEcCCCcEEE
Q psy17610 250 KEHTSSVSVIQIKSD---SKEAMSAST---DGTCVLWDLIKS--------TRLIIMILP-----SMIMSAAYHPSEVQLI 310 (515)
Q Consensus 250 ~~~~~~v~~~~~~~~---~~~l~~~~~---d~~i~iwd~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~l~ 310 (515)
++|......+.+..+ .+.+..+.. .+.+++.++... +....+..+ .-..++..++.-..++
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEE
Confidence 777655433332211 112333332 257888887432 112222222 2367788888888999
Q ss_pred EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610 311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
..+.-|.+++||+.++.++..-+-.. ..|...+......=++.....|.|.-..++..
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~-d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCC-CceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 99999999999999999998887665 55554454444334455557777766665544
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.37 E-value=0.0021 Score=64.25 Aligned_cols=232 Identities=10% Similarity=0.005 Sum_probs=142.0
Q ss_pred EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCC----ceEEEecCCCCCCe
Q psy17610 138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSG----KLKFIIPNAHNRGV 212 (515)
Q Consensus 138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~----~~~~~~~~~~~~~v 212 (515)
+|+.+ ....|+..++...+... +......+..++|.+....|+.. ...+.|+.+++... .....+ .......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~P 473 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAP 473 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCC
T ss_pred ccccc-cccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCCc
Confidence 44443 44668888887654433 33344456789999866655544 45678888888753 222223 3344556
Q ss_pred EEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEcccceEEE
Q psy17610 213 TALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDLIKSTRLI 289 (515)
Q Consensus 213 ~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~ 289 (515)
..|++.+.++.| ++-...+.|.+.+++..... ..+.........|++.|.+..|+.+.. . +.|...++.......
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~--~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE--EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 789998866544 45556789999998633222 222233445789999998776666653 2 678888886554444
Q ss_pred EEEcC-ccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610 290 IMILP-SMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366 (515)
Q Consensus 290 ~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 366 (515)
..... .....+++++.+..|+.+.. .+.|..+++........+... .......|++.. +.++++-...+.|...+.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence 43332 46889999987777776654 568999998655444444321 113345666643 345555566778888887
Q ss_pred cCCeeeeec
Q psy17610 367 REGVPCFVG 375 (515)
Q Consensus 367 ~~~~~~~~~ 375 (515)
.+++.+..+
T Consensus 631 ~tG~~~~~l 639 (791)
T 3m0c_C 631 LTGSDVNLL 639 (791)
T ss_dssp TTCCCCEEE
T ss_pred CCCcceEEe
Confidence 777555444
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.36 E-value=0.0013 Score=58.99 Aligned_cols=263 Identities=10% Similarity=0.071 Sum_probs=168.5
Q ss_pred CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610 229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (515)
.+.+|.|.|+..+.........+ .+.-.+|..+.++.-. ..++.++|+++.+.+.....+.++.--.|-.+...
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l 119 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV 119 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEE
T ss_pred CCCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeE
Confidence 34478888987554433332222 2344678777666655 67999999999999999999888877777655444
Q ss_pred EEEEECCCeEEEEeCCCC-ceEEEEecCC---CccEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCCeeeeeccC
Q psy17610 309 LITCSTNKMIDYWETCDG-SIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGA-------DQIVKMWMYREGVPCFVGIG 377 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~~~-~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~ 377 (515)
-++ .+..++-|++... .+.+.+..+. ...|.....+++.++++..+- .|.+.+|..+.+ ..+.+.+
T Consensus 120 ~lV--T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieG 196 (494)
T 1bpo_A 120 ALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG 196 (494)
T ss_dssp EEE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECC
T ss_pred EEE--cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhee
Confidence 333 4567999998753 4555665442 256777788999998875432 367889988653 4456677
Q ss_pred CCCCeeEEEECCC---CcEEEEEeC---CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610 378 HAASITKIKISPD---KKVIVSVSA---DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP 451 (515)
Q Consensus 378 ~~~~i~~~~~~~~---~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 451 (515)
|...-..+....+ ..+++.+.. .+.+++-++........ .+..+.. ..........+...++..|+
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~---~f~kk~v-----dv~fppe~~~DFPvamqvs~ 268 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ---PFPKKAV-----DVFFPPEAQNDFPVAMQISE 268 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC---CCCCEEE-----ECCCCTTSTTCCEEEEEEET
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC---Cccceee-----eeeCCcccccCceeEEEecc
Confidence 8765554444321 124444443 27899999865411111 1111000 00111112345577889999
Q ss_pred CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610 452 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK 509 (515)
Q Consensus 452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 509 (515)
....+...+.-|.+++||++++.++..-+-.. ..|..-+...+..-++.....|.|.
T Consensus 269 kygviyviTK~G~i~lyDleTgt~i~~nrIs~-~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 269 KHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp TTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTCEEE
T ss_pred cCCEEEEEecCceEEEEecccceeeeeecccC-CceEEecccCCCCcEEEEccCceEE
Confidence 99999999999999999999999987766544 6666666655555566666677554
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.31 E-value=0.00054 Score=61.73 Aligned_cols=225 Identities=14% Similarity=0.123 Sum_probs=123.1
Q ss_pred EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce--EEEec--CCCCCCeEEEEEcCC---CCEEEEecC-C-----CcEE
Q psy17610 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL--KFIIP--NAHNRGVTALAITQD---GTRLLSGGG-E-----GQVR 234 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--~~~~~--~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~ 234 (515)
....++|.|+|+ ++++...|.|.+++ .++. +..+. .........++++|+ +..|.++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 346899999998 55556779999998 3432 22221 122456899999998 555554433 2 5677
Q ss_pred EEEccCCc---e-eeEEeec---cccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccc---------
Q psy17610 235 IWKLTRES---Q-SLQCVLK---EHTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKS--------- 285 (515)
Q Consensus 235 iw~~~~~~---~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~--------- 285 (515)
.++..... . .....+. +.......++|.|+|.+.++.+.. |.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 78775321 1 1122232 111223689999999766664321 45555554320
Q ss_pred ---eEEEEE-EcCccEEEEEEcC-CCcEEEEEECCCe--------EEEEeCCC----------------CceEEEEecCC
Q psy17610 286 ---TRLIIM-ILPSMIMSAAYHP-SEVQLITCSTNKM--------IDYWETCD----------------GSIIRSLEGSD 336 (515)
Q Consensus 286 ---~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~~~~--------i~~~d~~~----------------~~~~~~~~~~~ 336 (515)
.....+ ........++|+| ++..+++-..... |.+..... ..+...+ .++
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~ 267 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG 267 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence 000111 1123467789999 5665554433332 33332111 0112222 111
Q ss_pred CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee------eeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610 337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP------CFVGIGHAASITKIKISPDKKVIVSVS 398 (515)
Q Consensus 337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~ 398 (515)
.....++| .+|.++++....+.|...+++.... ...+......+..+++.|||.++++..
T Consensus 268 -~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 268 -FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 34567777 4677777776777888887764321 122212235789999999998776654
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.31 E-value=0.00029 Score=61.20 Aligned_cols=157 Identities=8% Similarity=0.077 Sum_probs=106.9
Q ss_pred EEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCC-------CCCeEEEEE---cCCCCEEEEec---------
Q psy17610 169 CACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAH-------NRGVTALAI---TQDGTRLLSGG--------- 228 (515)
Q Consensus 169 v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~--------- 228 (515)
..++.|.+....+..++ ..+.|..|+...+...... ... ...+..+.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 35678988666666666 6899999999866544332 222 113679999 68877766533
Q ss_pred ----CCCcEEEEEcc---CCceeeEEeecccc-----------CceEEEEEecCCCEEEEEeCC-CcEEEEEcccceEEE
Q psy17610 229 ----GEGQVRIWKLT---RESQSLQCVLKEHT-----------SSVSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTRLI 289 (515)
Q Consensus 229 ----~d~~i~iw~~~---~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~ 289 (515)
.+..+..||+. +........+.... .....++..++|+..++.+.. +.|...+........
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 25779999986 44433333333221 247899999999999988888 887777765432222
Q ss_pred EEEcCc------cEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610 290 IMILPS------MIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326 (515)
Q Consensus 290 ~~~~~~------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~ 326 (515)
...... ....++++|++..|++....+.+..+|+...
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 221111 2568999999999999888999999998854
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.30 E-value=0.0018 Score=64.73 Aligned_cols=233 Identities=12% Similarity=-0.016 Sum_probs=141.4
Q ss_pred EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCC----ceeEEEEecCeEE
Q psy17610 95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTL----NELLRISVMNMIC 169 (515)
Q Consensus 95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~~~~~~v 169 (515)
+|+.+. ...|+..++... ....+.. ....+..|+|.+....|+.+.. .+.|+.+++... .....+.......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~-~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSC-CCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCC-cceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 444443 446888888764 3333333 4456789999986666666655 677888888753 2222222223345
Q ss_pred EEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeE
Q psy17610 170 ACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQ 246 (515)
Q Consensus 170 ~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~ 246 (515)
..|++.+.+..|+.+ ...+.|.+.++........+ .........|++.|.+..|+.... .+.|...+++.... .
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--~ 550 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--Y 550 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--E
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE-eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--E
Confidence 678898877655544 45688999998865544333 334456889999997666655442 26788888753222 2
Q ss_pred EeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610 247 CVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWE 322 (515)
Q Consensus 247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d 322 (515)
......-.....|++++.+..|+.+.. ...|...++............ .....+++..+ ..+++-...+.|...+
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEe
Confidence 222333356789999987777766654 567888888655444444332 23455665332 3333444567788888
Q ss_pred CCCCceEEEEec
Q psy17610 323 TCDGSIIRSLEG 334 (515)
Q Consensus 323 ~~~~~~~~~~~~ 334 (515)
..+++.+..+..
T Consensus 630 k~tG~~~~~l~~ 641 (791)
T 3m0c_C 630 RLTGSDVNLLAE 641 (791)
T ss_dssp TTTCCCCEEEEC
T ss_pred CCCCcceEEeec
Confidence 777766665543
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.27 E-value=0.0015 Score=58.90 Aligned_cols=225 Identities=14% Similarity=0.038 Sum_probs=122.6
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCCCcee-EE---eeccCccCeEEEEeCCC---CcEEEEEec-C-----Cc
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TL---VNTCHTSAIYDLQFPVN---FSSVFATCS-K-----ND 147 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~---~~~~h~~~v~~~~~~~~---~~~l~~~~~-d-----~~ 147 (515)
-.....++|.|+|++ +++..+|.|++++ ++... .. ...........++|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 346789999999984 4556679999998 33321 11 11112456789999998 556666554 2 56
Q ss_pred EEEEeCCCCce-----eEE-EEe---cCeEEEEEEEeeCCCEEEEEeC-------------CCeEEEEecCCC-------
Q psy17610 148 IRIWSVRTLNE-----LLR-ISV---MNMICACIVFTYDGKAILSGWN-------------DGFIRCFTPQSG------- 198 (515)
Q Consensus 148 i~iw~~~~~~~-----~~~-~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~~~~~~------- 198 (515)
|..++...+.. +.. +.. .......++|.|||.+.++.+. .|.|.-++.+..
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 88888764321 111 210 0112357899999975555332 256666665531
Q ss_pred -------ceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE------EEEEccCCc----------------eeeEEe
Q psy17610 199 -------KLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV------RIWKLTRES----------------QSLQCV 248 (515)
Q Consensus 199 -------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i------~iw~~~~~~----------------~~~~~~ 248 (515)
..+.. .++. ....++|+| ++.++++-.....+ .+.-+.... ..+...
T Consensus 187 ~~~~~~~~~i~a--~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 187 LGRRGARPEVYS--LGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp TTCTTSCTTEEE--ECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred cCCCCCCccEEE--EcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 11111 2332 256789999 66655543222221 122222111 011222
Q ss_pred eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce-------EEEEEEcCccEEEEEEcCCCcEEEEEE
Q psy17610 249 LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-------RLIIMILPSMIMSAAYHPSEVQLITCS 313 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~ 313 (515)
+.. ......++| .++..+++.-..+.|...++.... ....+.....+..+++.|+|.++++..
T Consensus 264 ~~~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 264 WPQ-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CTT-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred cCC-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 222 234566777 466666665566677777765432 112222335688899999987666654
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.24 E-value=0.0025 Score=57.35 Aligned_cols=227 Identities=14% Similarity=0.066 Sum_probs=126.1
Q ss_pred EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc-eEEEec--CCCCCCeEEEEEcCC---CCEEEEecC----C----CcE
Q psy17610 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-LKFIIP--NAHNRGVTALAITQD---GTRLLSGGG----E----GQV 233 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~--~~~~~~v~~~~~~~~---~~~l~~~~~----d----~~i 233 (515)
....++|.|+|+ |+++..+|.|++++ .+++ .+..+. .........++++|+ +..|.++.. + ..|
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 457899999997 55566779999997 3454 222221 122356889999997 455554432 2 567
Q ss_pred EEEEccCCc-----ee-eEEeecc-ccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccc--------
Q psy17610 234 RIWKLTRES-----QS-LQCVLKE-HTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKS-------- 285 (515)
Q Consensus 234 ~iw~~~~~~-----~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~-------- 285 (515)
..|+..... .+ ....+.. .......+.|.|||.++++.+.. |.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 777765331 11 1111221 11124679999999876664431 34555544321
Q ss_pred -eEEEEEEcCccEEEEEEcC-CCcEEEEEECCC---eEEEEeCCC--------C--------ceEEEEecCCCccEEEEE
Q psy17610 286 -TRLIIMILPSMIMSAAYHP-SEVQLITCSTNK---MIDYWETCD--------G--------SIIRSLEGSDVAAVNCVD 344 (515)
Q Consensus 286 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~---~i~~~d~~~--------~--------~~~~~~~~~~~~~i~~~~ 344 (515)
..+.. ........++|+| ++..+++-.... .|.+..... + .++..+...+ .....++
T Consensus 188 ~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~ 265 (354)
T 3a9g_A 188 NSPIWS-YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPSGAS 265 (354)
T ss_dssp TCCEEE-ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEEEEE
T ss_pred CCcEEE-EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCcceE
Confidence 01111 1223456799999 555544432221 243332111 0 1222221122 4567788
Q ss_pred Ec-------CCCCEEEEEcCCCeEEEEEccCC-eee--ee-ccCCCCCeeEEEECCCCcEEEEEe
Q psy17610 345 FV-------DDGKYFLTGGADQIVKMWMYREG-VPC--FV-GIGHAASITKIKISPDKKVIVSVS 398 (515)
Q Consensus 345 ~~-------~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~-~~~~~~~i~~~~~~~~~~~l~~~~ 398 (515)
|. .+|+++++....+.|...++... +.. .. +.+....+..+++.|||.+.++..
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 83 56777777777788988888753 221 22 223345789999999998766654
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.22 E-value=0.0022 Score=55.81 Aligned_cols=156 Identities=7% Similarity=0.077 Sum_probs=109.9
Q ss_pred EEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeecc----Cc--cCeEEEEe---CCCCcEEEEEe----------
Q psy17610 84 ISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTC----HT--SAIYDLQF---PVNFSSVFATC---------- 143 (515)
Q Consensus 84 v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~----h~--~~v~~~~~---~~~~~~l~~~~---------- 143 (515)
--+.+|++....+..++ ..++|..|+...+........+ .. ..+..|.| .|+++.+++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34779998666676666 7899999999864333333322 11 13578999 68876655443
Q ss_pred ---cCCcEEEEeCC---CCceeEEEEe-------------cCeEEEEEEEeeCCCEEEEEeCC-CeEEEEecCCCceEEE
Q psy17610 144 ---SKNDIRIWSVR---TLNELLRISV-------------MNMICACIVFTYDGKAILSGWND-GFIRCFTPQSGKLKFI 203 (515)
Q Consensus 144 ---~d~~i~iw~~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~~~~~~~~~ 203 (515)
.+..+..+|+. +++.+....- .......++..++|+..++++.. +.|...+.........
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 15779999999 8888776652 11357899999999999988888 8888888765533221
Q ss_pred ecC----CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610 204 IPN----AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT 239 (515)
Q Consensus 204 ~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~ 239 (515)
... ......+.|+++|+|+.|++....|.+..+|+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 111 112346799999999998888779999999986
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.22 E-value=0.0027 Score=56.90 Aligned_cols=255 Identities=9% Similarity=0.087 Sum_probs=162.1
Q ss_pred CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181 (515)
Q Consensus 102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 181 (515)
+..|.|.|+.++..+.+.... -.+.-.+|..+.++.= ...++.|+|+++.+.++...-.+ .|..=.|-.+. .|
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~----AdsAIMnP~~~iiALr-ag~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l 119 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV 119 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC----CSEEEECSSSSCEEEE-ETTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EE
T ss_pred CCeEEEEECCCCCcceecccc----cceeeeCCCCcEEEEe-cCCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eE
Confidence 347999999987665433221 2234467776544444 47899999999998888887554 44444555443 45
Q ss_pred EEEeCCCeEEEEecCCC-ceEEEecCCC----CCCeEEEEEcCCCCEEEEec-------CCCcEEEEEccCCceeeEEee
Q psy17610 182 LSGWNDGFIRCFTPQSG-KLKFIIPNAH----NRGVTALAITQDGTRLLSGG-------GEGQVRIWKLTRESQSLQCVL 249 (515)
Q Consensus 182 ~~~~~dg~i~~~~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~ 249 (515)
+..+ +..|.-|+++.. .+...+ ..| ...|..-..+++.++++..+ -.|.+.+|..+. ...+.+
T Consensus 120 ~lVT-~taVyHWsi~~~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~i 194 (494)
T 1bpo_A 120 ALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPI 194 (494)
T ss_dssp EEEC-SSEEEEEESSSSCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---CCEEEE
T ss_pred EEEc-CCeeEEecccCCCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---cccchh
Confidence 5554 457999999754 344444 222 34577777788888877443 247889999753 345566
Q ss_pred ccccCceEEEEEecCC---CEEEEEeCC---CcEEEEEcccc--------eEEEEEEcC-----ccEEEEEEcCCCcEEE
Q psy17610 250 KEHTSSVSVIQIKSDS---KEAMSASTD---GTCVLWDLIKS--------TRLIIMILP-----SMIMSAAYHPSEVQLI 310 (515)
Q Consensus 250 ~~~~~~v~~~~~~~~~---~~l~~~~~d---~~i~iwd~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~l~ 310 (515)
.+|......+....+. ..+..+... +.+.+.++... +....+..+ .-..++..++.-..++
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 7887655444432111 234444432 68888888532 112222222 2367788889888999
Q ss_pred EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610 311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
..+.-|.+++||+.++.++..-+-.. ..|...+......=++.....|.|.-..++..
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~-~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEecCceEEEEecccceeeeeecccC-CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 99999999999999999998877665 55555555444444555557777766666544
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.12 E-value=2e-05 Score=78.00 Aligned_cols=211 Identities=7% Similarity=-0.029 Sum_probs=122.1
Q ss_pred CCCcEEEEEEecCCCEEEEEe-cCceEEEEECCC---CceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCC
Q psy17610 80 DDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNS---GFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVR 154 (515)
Q Consensus 80 ~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~ 154 (515)
....+..|+|++.+..|+.+. ..+.|+.+++.+ +.....+..........|++.+.+..|+.+. ..+.|.+.++.
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 345667899999777776654 457899999875 1122222221223356788886555665554 47889999987
Q ss_pred CCceeEEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCC
Q psy17610 155 TLNELLRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEG 231 (515)
Q Consensus 155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~ 231 (515)
.......+.........+++.|.+.+|+.+.. .+.|..+++......... ...-...+.|+|+|++..| ++-+..+
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~-~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES-CSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE-eCCCCCccEEEEeccCCEEEEEecCCC
Confidence 54433322222234567889887665555442 267888877643322222 2223446789999865544 4555667
Q ss_pred cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE
Q psy17610 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292 (515)
Q Consensus 232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 292 (515)
.|..++++......+............+++..+ .++++....+.|..++..+++.+..+.
T Consensus 563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 899999864322222111111222345555443 444455556789999887777666554
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.03 E-value=0.007 Score=54.44 Aligned_cols=240 Identities=12% Similarity=0.081 Sum_probs=125.8
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEE----cCccEEEEEEcCC---CcEEEEEEC----C----Ce
Q psy17610 254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMI----LPSMIMSAAYHPS---EVQLITCST----N----KM 317 (515)
Q Consensus 254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~----~~~~~~~~~~~~~---~~~l~~~~~----~----~~ 317 (515)
.....++|.|+++ ++.+..+|.|.+++. .++ .+..+. .......++++|+ +..|+++.. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4567899999987 555566799999973 444 111111 1245889999998 555555443 2 56
Q ss_pred EEEEeCCCC-------ceE-EEEecCCCccEEEEEEcCCCCEEEEEcC-------------CCeEEEEEccCC-------
Q psy17610 318 IDYWETCDG-------SII-RSLEGSDVAAVNCVDFVDDGKYFLTGGA-------------DQIVKMWMYREG------- 369 (515)
Q Consensus 318 i~~~d~~~~-------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~------- 369 (515)
|..++.... +.+ ..+..........++|.|||.++++.+. .|.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777876554 111 1233221123467999999987776442 245555554321
Q ss_pred --eeeeeccCCCCCeeEEEECC-CCcEEEEEeCCC---cEEEEeCCCCcCccCCCcccceeeecccccccceeee-cCcc
Q psy17610 370 --VPCFVGIGHAASITKIKISP-DKKVIVSVSADG---GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM-ILPS 442 (515)
Q Consensus 370 --~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 442 (515)
..+. ..++. ....++|+| +++++++-.... .|.+. .......-....... .. .......... ....
T Consensus 187 ~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~--~~-~~~~~p~~~~~~~~~ 259 (354)
T 3a9g_A 187 PNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKA--GR-GEFVDPVIDTGSETW 259 (354)
T ss_dssp TTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCC--CC-TTSCCCSEECTTCCC
T ss_pred CCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCC--CC-CCCcCCEeecCCCCc
Confidence 0111 12333 346799999 566544432221 23332 211100000000000 00 0000000000 1123
Q ss_pred cEEEeee-------ccCCcEEEEeecCCeEEEEecCCC-eee--eee-cccccceEEEEEEcCCCcEEEEee
Q psy17610 443 MIMSAAY-------HPSEVQLITCSTNKMIDYWETCDG-SII--RSL-EGSDVAAVNCVDFVDDGKYFLTGG 503 (515)
Q Consensus 443 ~i~~~~~-------s~~~~~l~~~~~dg~v~iwd~~~~-~~~--~~~-~~~~~~~v~~~~~s~~~~~l~s~~ 503 (515)
....++| ..+|.++++.-..+.|...++... +.. ..+ .+. ...+..+++.|||.+.++..
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCcEEEEEe
Confidence 4666777 356777776666778888888753 322 222 222 26789999999998766654
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.98 E-value=0.0086 Score=53.87 Aligned_cols=236 Identities=14% Similarity=0.076 Sum_probs=125.7
Q ss_pred EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE---e---cCCCCCCeEEEEEcCC---CCEEEEec-C-------C
Q psy17610 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI---I---PNAHNRGVTALAITQD---GTRLLSGG-G-------E 230 (515)
Q Consensus 168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~---~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d 230 (515)
....++|.|+|+.|+++...|.|++++.. +..... + ..........++++|+ +..|.... . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 34789999999845556678999999853 332111 1 0122346789999995 44454442 2 2
Q ss_pred CcEEEEEccCCc-----eee-EEeecc---ccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccce--
Q psy17610 231 GQVRIWKLTRES-----QSL-QCVLKE---HTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKST-- 286 (515)
Q Consensus 231 ~~i~iw~~~~~~-----~~~-~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~-- 286 (515)
..|..|++.... .+. ...+.. .......+.|.|||.+.++.+.. |.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 356666664321 111 111111 11123579999999666655432 356666654220
Q ss_pred ----------EEEEE-EcCccEEEEEEcC-CCcEEEEEEC-C--CeEEEEeC--------CC------------------
Q psy17610 287 ----------RLIIM-ILPSMIMSAAYHP-SEVQLITCST-N--KMIDYWET--------CD------------------ 325 (515)
Q Consensus 287 ----------~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~-~--~~i~~~d~--------~~------------------ 325 (515)
....+ ........++|+| ++.++++-.. + ..|.+... ..
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIV 257 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSC
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCC
Confidence 11111 1223578899999 4554443222 1 12222110 00
Q ss_pred ---CceEEEEecCCCccEEEEEEcC-------CCCEEEEEcCCCeEEEEEccCCeeeee---ccCCCCCeeEEEECCCCc
Q psy17610 326 ---GSIIRSLEGSDVAAVNCVDFVD-------DGKYFLTGGADQIVKMWMYREGVPCFV---GIGHAASITKIKISPDKK 392 (515)
Q Consensus 326 ---~~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~ 392 (515)
..++..+.. + ..+..++|.. +|+++++....+.|...++..++.... +......+..+++.|||.
T Consensus 258 ~~~~~P~~~~~~-~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 258 AGTEQPVFYWKD-S-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp TTSCCCSEEESS-C-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCccCCeEEeCC-C-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 011111211 1 3566777753 577777777788888888876543322 222335789999999998
Q ss_pred EEEEEe-CCCcEEEEeC
Q psy17610 393 VIVSVS-ADGGIFLWTF 408 (515)
Q Consensus 393 ~l~~~~-~dg~i~iw~~ 408 (515)
++++.. .+| +||.+
T Consensus 336 lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 336 LYVLTDESSG--ELLKV 350 (353)
T ss_dssp EEEEECSTTE--EEEEE
T ss_pred EEEEEeCCCC--EEEEE
Confidence 666543 233 45543
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.98 E-value=0.0025 Score=56.70 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=106.6
Q ss_pred ceEEEEEecCCCEEEEE------------eCCCcEEEEEccc--ceEEE-EEEc--C----ccEEEEEEcC--CCc-EEE
Q psy17610 255 SVSVIQIKSDSKEAMSA------------STDGTCVLWDLIK--STRLI-IMIL--P----SMIMSAAYHP--SEV-QLI 310 (515)
Q Consensus 255 ~v~~~~~~~~~~~l~~~------------~~d~~i~iwd~~~--~~~~~-~~~~--~----~~~~~~~~~~--~~~-~l~ 310 (515)
....+...|+|..++++ ..+|.|.++|..+ .+... .+.. . -....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34556667766444443 2689999999873 22221 1221 1 2567777755 343 344
Q ss_pred EE-EC--CCeEEEEeCCCC----ceEEEEecCCCccEEEEEEcCCCCEEEEEcC-----------------CCeEEEEEc
Q psy17610 311 TC-ST--NKMIDYWETCDG----SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-----------------DQIVKMWMY 366 (515)
Q Consensus 311 ~~-~~--~~~i~~~d~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~ 366 (515)
++ .. +..+.+|++... ..+..+........+.+.+.++|.+.++... .|.+.-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44 33 457777766543 2234455554567899999999998777541 244555544
Q ss_pred cCCeeeeeccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE
Q psy17610 367 REGVPCFVGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM 445 (515)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 445 (515)
++ +..+...-...+.++|+||++.|..+. ..+.|..|++..... +... + .. ..+...-
T Consensus 211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~-------l~~~---------~-~~-~~~g~PD 269 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT-------LTPL---------R-VL-SFDTLVD 269 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC-------EEEE---------E-EE-ECSSEEE
T ss_pred --Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc-------EecC---------E-EE-eCCCCCc
Confidence 32 222222334568999999998887765 467899999863210 0000 0 00 1135577
Q ss_pred Eeeecc-CCcEEEEee
Q psy17610 446 SAAYHP-SEVQLITCS 460 (515)
Q Consensus 446 ~~~~s~-~~~~l~~~~ 460 (515)
.+++.+ +|++.+++.
T Consensus 270 Gi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 270 NISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEECTTTCCEEEEEE
T ss_pred eEEEeCCCCcEEEEec
Confidence 888888 588777554
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.96 E-value=2e-05 Score=78.08 Aligned_cols=227 Identities=12% Similarity=-0.024 Sum_probs=130.4
Q ss_pred CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC----CceeEEEEecCeEEEEEEEee
Q psy17610 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT----LNELLRISVMNMICACIVFTY 176 (515)
Q Consensus 102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~ 176 (515)
.+.|+..++.+. ....+.. ....+..++|++.+..|+.+.. .+.|..+++.. ......+.........+++.+
T Consensus 385 ~~~I~~id~~~~-~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSC-CEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCC-cceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 457888888774 3333333 2345678999987777777765 67899999875 222111111112335577775
Q ss_pred CCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeEEeecccc
Q psy17610 177 DGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQCVLKEHT 253 (515)
Q Consensus 177 ~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~ 253 (515)
.+..|+ +-...+.|.++++........+ .........++++|.+.+|+.... .+.|..+++....... .....-
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~--l~~~~l 539 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLF-REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS--LVTENI 539 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEEC-CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE--ESCSSC
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEE-eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE--EEeCCC
Confidence 544444 4445678999998765544333 223345678899986555554442 2678777765322211 111223
Q ss_pred CceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610 254 SSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII 329 (515)
Q Consensus 254 ~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~ 329 (515)
.....|+++|++..|+.+. ..+.|..+++............ .....+++..+ ..+++....+.|..++..+++.+
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence 3456899998766655544 5678999998654333322211 22344555443 34444455678888888777766
Q ss_pred EEEec
Q psy17610 330 RSLEG 334 (515)
Q Consensus 330 ~~~~~ 334 (515)
..+..
T Consensus 619 ~~i~~ 623 (699)
T 1n7d_A 619 NLLAE 623 (699)
T ss_dssp ECCCT
T ss_pred EEeec
Confidence 66543
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.92 E-value=0.0016 Score=57.40 Aligned_cols=214 Identities=10% Similarity=0.073 Sum_probs=112.6
Q ss_pred CeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCc---eeeEEeeccccCceEE
Q psy17610 188 GFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRES---QSLQCVLKEHTSSVSV 258 (515)
Q Consensus 188 g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~---~~~~~~~~~~~~~v~~ 258 (515)
..+.+||+.+++....-..+. ......+. .++..++.|+.+ ..+.+||+.+.. ......++........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 368899988876543221111 11122222 256677777754 468899987665 4444333322222222
Q ss_pred EEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCC
Q psy17610 259 IQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDG 326 (515)
Q Consensus 259 ~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~ 326 (515)
+. .+++.++.|+.+ ..+.+||+.+.+-...-..+.+ -.+++. .+++.++.|+.+ ..+..||+.+.
T Consensus 109 ~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 109 TT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 256667776643 3588899887664444333322 112222 256666776654 45889998876
Q ss_pred ceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeeee--ccCCCCCeeEEEECCCCcEEEEEe
Q psy17610 327 SIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCFV--GIGHAASITKIKISPDKKVIVSVS 398 (515)
Q Consensus 327 ~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~ 398 (515)
+-...-..+.. .....+. -++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 261 (301)
T 2vpj_A 186 HWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAG 261 (301)
T ss_dssp EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred cEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcC
Confidence 54333221111 1112222 256778888764 4689999987643222 2111112222233 667777776
Q ss_pred CC-----CcEEEEeCCC
Q psy17610 399 AD-----GGIFLWTFPE 410 (515)
Q Consensus 399 ~d-----g~i~iw~~~~ 410 (515)
.+ ..+.+||+.+
T Consensus 262 ~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPII 278 (301)
T ss_dssp BCSSSBEEEEEEEETTT
T ss_pred cCCCcccccEEEEcCCC
Confidence 55 3467777654
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.91 E-value=0.0016 Score=57.38 Aligned_cols=217 Identities=9% Similarity=0.057 Sum_probs=112.1
Q ss_pred CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCc---eEEEecCCC-CCCeEEEE
Q psy17610 146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGK---LKFIIPNAH-NRGVTALA 216 (515)
Q Consensus 146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~---~~~~~~~~~-~~~v~~~~ 216 (515)
..+.++|..+.+-...-..........+...++..++.|+.+ ..+.+||+.+++ ....-.... ......+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 357888877654221111111111111222356666777654 468999998876 433321111 11122222
Q ss_pred EcCCCCEEEEecCC-----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccce
Q psy17610 217 ITQDGTRLLSGGGE-----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKST 286 (515)
Q Consensus 217 ~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 286 (515)
+ +++.++.|+.+ ..+.+||+.+.+......++.....-..+. .+++.++.|+.+ ..+..||+.+.+
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 2 56677777643 358889987666555544332222222222 366677777654 458899988775
Q ss_pred EEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC
Q psy17610 287 RLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD 358 (515)
Q Consensus 287 ~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d 358 (515)
-...-..+.+ -.+++. .+++.++.|+.+ ..+.+||+.+.+-...-..+.. .....+. -++++++.|+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~ 263 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYD 263 (301)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred EEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcC
Confidence 4443222221 112222 256666776653 4688999987754332221111 1112222 267777777755
Q ss_pred -----CeEEEEEccCC
Q psy17610 359 -----QIVKMWMYREG 369 (515)
Q Consensus 359 -----g~i~i~d~~~~ 369 (515)
..+.+||.++.
T Consensus 264 ~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 264 GNSLLSSIECYDPIID 279 (301)
T ss_dssp SSSBEEEEEEEETTTT
T ss_pred CCcccccEEEEcCCCC
Confidence 35677777654
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.85 E-value=0.015 Score=52.25 Aligned_cols=233 Identities=12% Similarity=0.042 Sum_probs=124.9
Q ss_pred CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEE------eeccCccCeEEEEeCCC---CcEEEEEec--------
Q psy17610 82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL------VNTCHTSAIYDLQFPVN---FSSVFATCS-------- 144 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~------~~~~h~~~v~~~~~~~~---~~~l~~~~~-------- 144 (515)
.....|+|.|+|++|+++...|.|++++.+. ..... ...........++|+|+ +..|+++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4578999999998455566789999998643 22110 11112345789999996 455655543
Q ss_pred CCcEEEEeCCCCc----eeEE-EEecC------eEEEEEEEeeCCCEEEEEeC-------------CCeEEEEecCCCc-
Q psy17610 145 KNDIRIWSVRTLN----ELLR-ISVMN------MICACIVFTYDGKAILSGWN-------------DGFIRCFTPQSGK- 199 (515)
Q Consensus 145 d~~i~iw~~~~~~----~~~~-~~~~~------~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~~~~~~~- 199 (515)
...|..+++.... .... +.... ..-..++|.|||.+.++.+. .|.|.-++.+..-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 1346666665331 1111 11111 11356999999965554433 2467777765320
Q ss_pred -----------eEEEecCCCCCCeEEEEEcC-CCCEEEEecC--CCcEEEEEccCCc-----------------------
Q psy17610 200 -----------LKFIIPNAHNRGVTALAITQ-DGTRLLSGGG--EGQVRIWKLTRES----------------------- 242 (515)
Q Consensus 200 -----------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~--d~~i~iw~~~~~~----------------------- 242 (515)
....+..++. ....++|+| +++ |.++.. ++.=.|.-+....
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 1111112343 367899999 554 443322 1112222221100
Q ss_pred ------eeeEEeeccccCceEEEEEec-------CCCEEEEEeCCCcEEEEEcccceEEEEEE----cCccEEEEEEcCC
Q psy17610 243 ------QSLQCVLKEHTSSVSVIQIKS-------DSKEAMSASTDGTCVLWDLIKSTRLIIMI----LPSMIMSAAYHPS 305 (515)
Q Consensus 243 ------~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~ 305 (515)
..+...+. +......+.|.. ++.++++.-..+.|...++..++...... ....+..+++.|+
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 00111122 223566777763 46666666667788888877654433222 1246889999999
Q ss_pred CcEEEEEE-CCCeE
Q psy17610 306 EVQLITCS-TNKMI 318 (515)
Q Consensus 306 ~~~l~~~~-~~~~i 318 (515)
|.++++.. .+|.|
T Consensus 334 G~lyv~td~~~g~I 347 (353)
T 2g8s_A 334 GYLYVLTDESSGEL 347 (353)
T ss_dssp SCEEEEECSTTEEE
T ss_pred CcEEEEEeCCCCEE
Confidence 98666543 34443
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.82 E-value=0.0045 Score=54.46 Aligned_cols=225 Identities=8% Similarity=0.065 Sum_probs=115.2
Q ss_pred CEEEEEeCC----CeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCceeeEEe
Q psy17610 179 KAILSGWND----GFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQSLQCV 248 (515)
Q Consensus 179 ~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~ 248 (515)
..++.|+.+ ..+.+||+.+.+....-..+. ...-..+.+ ++..++.|+.+ ..+.+||..+.+......
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344455432 458889988876543311111 111122222 56677777754 358889987665554443
Q ss_pred eccccCceEEEEEecCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC-------
Q psy17610 249 LKEHTSSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST------- 314 (515)
Q Consensus 249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~------- 314 (515)
++.......... -++..++.|+.++ .+.+||+.+.+-...-..+.+ -.+++. -+++.++.|+.
T Consensus 95 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 95 MRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEE
T ss_pred CCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCcc
Confidence 332222222222 3567777777553 477888877654443222221 112222 25566666543
Q ss_pred CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeee--eccCCCCCeeEEEE
Q psy17610 315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCF--VGIGHAASITKIKI 387 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~ 387 (515)
...+..||+.+.+-...-..+....-.+++. -++++++.|+.+ ..+.+||..+.+-.. .+......-..+.+
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 250 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV 250 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE
Confidence 2358889988765433222111111112222 257788888764 368899987764222 12111111122222
Q ss_pred CCCCcEEEEEeCCC-----cEEEEeCCCC
Q psy17610 388 SPDKKVIVSVSADG-----GIFLWTFPEL 411 (515)
Q Consensus 388 ~~~~~~l~~~~~dg-----~i~iw~~~~~ 411 (515)
++++++.|+.++ .+.+||+.+.
T Consensus 251 --~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 251 --NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp --TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred --CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 667777777553 4788887654
No 319
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.81 E-value=0.022 Score=52.97 Aligned_cols=227 Identities=10% Similarity=0.044 Sum_probs=132.1
Q ss_pred CCCEEEEEeC-CCcEEEEEcccceEEEEEEcCc--cEEEEEEc--CCCcEEEEEECC-------CeE------------E
Q psy17610 264 DSKEAMSAST-DGTCVLWDLIKSTRLIIMILPS--MIMSAAYH--PSEVQLITCSTN-------KMI------------D 319 (515)
Q Consensus 264 ~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~--~~~~~l~~~~~~-------~~i------------~ 319 (515)
||++++.-.. +..|...++...++.+.+..+. .+..+.+- |+..++++++.. |.. .
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 6778877764 5678888999998888887764 68888886 788888877642 221 1
Q ss_pred EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---------------CeEEEEEcc-----------------
Q psy17610 320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---------------QIVKMWMYR----------------- 367 (515)
Q Consensus 320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~----------------- 367 (515)
..|..+.+...++... +....+...++|++.++.+.+ ..+.++++.
T Consensus 221 ~iD~~tm~v~~Qv~v~--gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~ 298 (638)
T 3sbq_A 221 AIDAETMEMAFQVIVD--GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDS 298 (638)
T ss_dssp EEETTTCSEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred EEcCCccEEEEEEEcC--CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCC
Confidence 1233333333333221 233345556777777765432 135555542
Q ss_pred --------C----CeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCc-ccceeeeccccccc
Q psy17610 368 --------E----GVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSR-SLSSKISRSTARST 433 (515)
Q Consensus 368 --------~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 433 (515)
. +..+..+..-......+..+|||++++.++. +.++.++|+........... .. ...
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~---------~~~ 369 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP---------RDV 369 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG---------GGG
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc---------ccc
Confidence 1 1111111122234456889999999988765 78899999876432111100 00 000
Q ss_pred ceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC----------eeeeeecccccceEEEEEE------cCCCc
Q psy17610 434 RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----------SIIRSLEGSDVAAVNCVDF------VDDGK 497 (515)
Q Consensus 434 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~v~~~~~------s~~~~ 497 (515)
..............+|.++|.-..+---|..|.-|++... ..+..+.-| ..+-.+.- .|||+
T Consensus 370 ~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~--YqpGH~~~~~get~~~dGk 447 (638)
T 3sbq_A 370 IVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH--YQPGHLHASLCETNEADGK 447 (638)
T ss_dssp EEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS--SCEEEEEETTTTSTTCCSC
T ss_pred eEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc--cCCcccccCCCccCCCCcc
Confidence 0001112234778899999965566668999999998753 345555554 23333333 67888
Q ss_pred EEEEee
Q psy17610 498 YFLTGG 503 (515)
Q Consensus 498 ~l~s~~ 503 (515)
+|++..
T Consensus 448 ~lv~ln 453 (638)
T 3sbq_A 448 WLVALS 453 (638)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888754
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.76 E-value=0.0044 Score=54.53 Aligned_cols=228 Identities=9% Similarity=0.065 Sum_probs=112.6
Q ss_pred CCEEEEEecC----ceEEEEECCCCceeEEee--ccCccCeEEEEeCCCCcEEEEEecC-----CcEEEEeCCCCceeEE
Q psy17610 93 NNKVFVGTVN----CEIFLIDMNSGFTLTLVN--TCHTSAIYDLQFPVNFSSVFATCSK-----NDIRIWSVRTLNELLR 161 (515)
Q Consensus 93 ~~~l~~~~~d----~~i~iw~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~ 161 (515)
+.+++.|+.+ ..+..||..+.. -.... ......-..+.+ ++..++.++.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEER-WHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCc-EeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3445555532 468889988742 22221 111111112222 45566666543 3588888876542221
Q ss_pred EEecCeEEEEEEEeeCCCEEEEEeCCC-----eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC------
Q psy17610 162 ISVMNMICACIVFTYDGKAILSGWNDG-----FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE------ 230 (515)
Q Consensus 162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 230 (515)
-..........+..-++..++.|+.++ .+.+||+.+.+....-.......-.+++.. +++.++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEE
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCcc
Confidence 111111111111123666677776543 578899888765443211111111122222 56667776643
Q ss_pred -CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEE
Q psy17610 231 -GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAY 302 (515)
Q Consensus 231 -~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~ 302 (515)
..+.+||+.+........++....... +.. -+++.++.|+.+ ..+.+||+.+.+-......+.+ -..++
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~- 248 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRSGAG-VGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC- 248 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCE-EEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-
T ss_pred ccEEEEEeCCCCcEEECCCCcccccccc-EEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-
Confidence 358889987665554433332222222 222 256777777654 3688999887654433222221 11122
Q ss_pred cCCCcEEEEEECCC-----eEEEEeCCCCc
Q psy17610 303 HPSEVQLITCSTNK-----MIDYWETCDGS 327 (515)
Q Consensus 303 ~~~~~~l~~~~~~~-----~i~~~d~~~~~ 327 (515)
..+++.++.|+.++ .+.+||+.+.+
T Consensus 249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 249 AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 22566666666543 47777776654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.71 E-value=0.0056 Score=54.21 Aligned_cols=212 Identities=6% Similarity=-0.022 Sum_probs=106.6
Q ss_pred EEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----C-------CcEEEEEccCCceeeEEee
Q psy17610 181 ILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----E-------GQVRIWKLTRESQSLQCVL 249 (515)
Q Consensus 181 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------~~i~iw~~~~~~~~~~~~~ 249 (515)
++.|+ ..+..||+.+++....-...............++..++.|+. + ..+..||..+........+
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 33444 569999999887643221111122333333457777777773 1 1267788765554433322
Q ss_pred ccccCceEEEEEecCCCEEEEEeCC--------CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC-C---
Q psy17610 250 KEHTSSVSVIQIKSDSKEAMSASTD--------GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST-N--- 315 (515)
Q Consensus 250 ~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~-~--- 315 (515)
+...... +++. -++..++.|+.+ ..+.+||..+.+-...-..+.+ -.+++. .+++.++.|+. +
T Consensus 86 p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 86 PSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRK 162 (315)
T ss_dssp SSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSC
T ss_pred Ccchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCc
Confidence 2211111 2222 255666666632 4588999887654332222221 122222 45566666665 2
Q ss_pred --CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC-----eEEEEEccCCeeee--eccCCCCCeeEEE
Q psy17610 316 --KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-----IVKMWMYREGVPCF--VGIGHAASITKIK 386 (515)
Q Consensus 316 --~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~--~~~~~~~~i~~~~ 386 (515)
..+.+||..+.+-...-..+....-.+++. -++++++.|+.++ .+.+||..+.+-.. .+.........+.
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 241 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS 241 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE
Confidence 468899988764332211111111112222 2677888887654 58889987763222 2211111222233
Q ss_pred ECCCCcEEEEEeCC
Q psy17610 387 ISPDKKVIVSVSAD 400 (515)
Q Consensus 387 ~~~~~~~l~~~~~d 400 (515)
+ ++++++.|+.+
T Consensus 242 ~--~~~l~v~GG~~ 253 (315)
T 4asc_A 242 L--VGTLYAIGGFA 253 (315)
T ss_dssp E--TTEEEEEEEEE
T ss_pred E--CCEEEEECCcc
Confidence 3 56777777653
No 322
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.70 E-value=0.024 Score=50.45 Aligned_cols=196 Identities=11% Similarity=0.123 Sum_probs=112.2
Q ss_pred CcEEEEEEecCCCEEEEE------------ecCceEEEEECCC--CceeEEeecc-----CccCeEEEEeCC--CCc-EE
Q psy17610 82 SGISSLQYNPVNNKVFVG------------TVNCEIFLIDMNS--GFTLTLVNTC-----HTSAIYDLQFPV--NFS-SV 139 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~------------~~d~~i~iw~~~~--~~~~~~~~~~-----h~~~v~~~~~~~--~~~-~l 139 (515)
...-.++..|+|..++++ ..+|.|.++|.++ ++.......+ ..-....+.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 344566678877544443 1689999999974 2222222222 223566777755 443 45
Q ss_pred EEEec---CCcEEEEeCCCCcee-E---EEEec-CeEEEEEEEeeCCCEEEEEe-----------------CCCeEEEEe
Q psy17610 140 FATCS---KNDIRIWSVRTLNEL-L---RISVM-NMICACIVFTYDGKAILSGW-----------------NDGFIRCFT 194 (515)
Q Consensus 140 ~~~~~---d~~i~iw~~~~~~~~-~---~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~~ 194 (515)
+++.. +.+|.+|+++..... . .+.+. -.....+.+.++|.+.++.. ..|.+..++
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 55533 467888887654222 2 22221 12468899999998766643 124455555
Q ss_pred cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCC-ceeeEEeeccccCceEEEEEec-CCCEEEEE
Q psy17610 195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKS-DSKEAMSA 271 (515)
Q Consensus 195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 271 (515)
. ++..... ..-...+.++|+||++.|+.+. ..+.|..|++... .......+ ........+++.+ +|++.+++
T Consensus 210 ~--~~~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 210 P--NDVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp T--TCCEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred C--CeEEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 4 3332221 2234568999999998777654 5688999998632 22222233 2245567888888 58877766
Q ss_pred eCC-CcEEEEEc
Q psy17610 272 STD-GTCVLWDL 282 (515)
Q Consensus 272 ~~d-~~i~iwd~ 282 (515)
..+ +.|..|+.
T Consensus 285 ~~~g~~v~~~~P 296 (355)
T 3sre_A 285 HPNGMRIFFYDA 296 (355)
T ss_dssp ESCHHHHHSCCT
T ss_pred cCCceEEEEECC
Confidence 544 34444444
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.69 E-value=0.0057 Score=54.91 Aligned_cols=142 Identities=15% Similarity=0.098 Sum_probs=91.2
Q ss_pred CCeEEEEeCCCCceEEEEecC---CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe------------eeeeccC--
Q psy17610 315 NKMIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV------------PCFVGIG-- 377 (515)
Q Consensus 315 ~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~-- 377 (515)
++.||.-++......+.+..+ ....+..+..+|+|++||..+. ..|.|..+..+. ..+.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 356777676655455555554 2246788999999999999875 478888887321 0111111
Q ss_pred ----CCCCeeEEEECC---CCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610 378 ----HAASITKIKISP---DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH 450 (515)
Q Consensus 378 ----~~~~i~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 450 (515)
...+|..+.|+| .+..|++-..|+.|++||+........ .+... ....-.......+.+++|+
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~---~L~k~-------~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI---VLNKP-------NNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE---EESCC-------CSEEESCSSCCCEEEEEEC
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc---chhcc-------ccccCCCcccceEEEEEEc
Confidence 357799999999 456899999999999999987321111 11100 0001111222568899999
Q ss_pred cCCcEEEEee--cCCeEEE
Q psy17610 451 PSEVQLITCS--TNKMIDY 467 (515)
Q Consensus 451 ~~~~~l~~~~--~dg~v~i 467 (515)
+++-.|...+ ..|.|+-
T Consensus 189 ~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TTSSCEEEEECTTSCEEEE
T ss_pred CCCcEEEEEecCCCCCEEE
Confidence 9887666644 7888764
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.69 E-value=0.012 Score=47.46 Aligned_cols=179 Identities=8% Similarity=-0.047 Sum_probs=95.8
Q ss_pred CcEEEEEECCCeEEEEeCCCCc------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610 306 EVQLITCSTNKMIDYWETCDGS------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA 379 (515)
Q Consensus 306 ~~~l~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 379 (515)
+.+|+....| +++.=...++. ...++-...-..+..++|+|+|.+.++ .+|.++-.+..+.... ...+..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccc
Confidence 3445555555 55554444443 233333322246779999999997777 6777666665442111 010111
Q ss_pred CC--------eeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610 380 AS--------ITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP 451 (515)
Q Consensus 380 ~~--------i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 451 (515)
.. -.++.|.|+|.+.++ .||.|.-++-.+.... .-+ .....+-..-=..+..+.+.|
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~----~Wl---------~~a~~vg~~gw~~~~~lff~p 144 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD----NWI---------ARATEVGSGGWSGFKFLFFHP 144 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC----CHH---------HHSEEEECSSGGGEEEEEECT
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC----cee---------ccccEeccCCCCceEEEEECC
Confidence 22 478999999987777 5688877764332110 000 000000011113478999999
Q ss_pred CCcEEEEeecCCeEEEEecCCCee------eeeecccccceEEEEEEcCCCcEEEEeecCCe
Q psy17610 452 SEVQLITCSTNKMIDYWETCDGSI------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 507 (515)
Q Consensus 452 ~~~~l~~~~~dg~v~iwd~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 507 (515)
+|.+.++. |+.++-....++.. ...+-...-..-.-+.|.|++...+.. +|.
T Consensus 145 ~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 145 NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 99887776 77765443332210 011110111234457799999876665 763
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.68 E-value=0.0071 Score=53.26 Aligned_cols=224 Identities=11% Similarity=0.055 Sum_probs=118.0
Q ss_pred EEEEEeC--CCeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCceeeEEeeccc
Q psy17610 180 AILSGWN--DGFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQSLQCVLKEH 252 (515)
Q Consensus 180 ~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~ 252 (515)
.++.|+. ...+.+||..+++....-..+. ...-..+.+ ++..++.|+.+ ..+.+||...........++..
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4445543 3578999998876543321111 111222222 56677777754 5688899876655554443322
Q ss_pred cCceEEEEEecCCCEEEEEeCC------CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC---------C
Q psy17610 253 TSSVSVIQIKSDSKEAMSASTD------GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST---------N 315 (515)
Q Consensus 253 ~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~---------~ 315 (515)
......+. -+++.++.|+.+ ..+.+||..+.+-...-..+.+ -.+++. .+++.++.|+. -
T Consensus 92 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 92 RDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEEC
T ss_pred ccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccccc
Confidence 22222222 266677777754 4688999887764443222221 112222 25566666543 3
Q ss_pred CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCee--eeeccCCCCCeeEEEEC
Q psy17610 316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVP--CFVGIGHAASITKIKIS 388 (515)
Q Consensus 316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~ 388 (515)
..+.+||+.+.+-...-..+....-.++... ++++++.|+.+ ..+.+||..+.+- +..+.........+.+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 246 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV- 246 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE-
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE-
Confidence 4588999887754332222111111122222 67777877653 3588899877532 2222222222233333
Q ss_pred CCCcEEEEEeCC-----CcEEEEeCCCC
Q psy17610 389 PDKKVIVSVSAD-----GGIFLWTFPEL 411 (515)
Q Consensus 389 ~~~~~l~~~~~d-----g~i~iw~~~~~ 411 (515)
++++++.|+.+ ..+.+||+.+.
T Consensus 247 -~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 247 -GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp -TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred -CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 67777778754 45777777653
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.00083 Score=59.20 Aligned_cols=202 Identities=11% Similarity=0.112 Sum_probs=109.3
Q ss_pred CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEe--CCCCcEEEEE--ecCCcEEEEeCCCCceeEEEEecC--
Q psy17610 93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF--PVNFSSVFAT--CSKNDIRIWSVRTLNELLRISVMN-- 166 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~-- 166 (515)
+..+++++.||.|+-.|.++|+..-........++....- .+.+..++.. ..||.+..++..+|.....+....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 3478899999999999999987766654332123322211 1112244444 579999999998886555444211
Q ss_pred --eEEEE---EEE-e----eCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC------eEEEEEc-----CCCCEEE
Q psy17610 167 --MICAC---IVF-T----YDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG------VTALAIT-----QDGTRLL 225 (515)
Q Consensus 167 --~~v~~---~~~-~----~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~------v~~~~~~-----~~~~~l~ 225 (515)
.++.. ... . ..+..+++++.+|.+...|+.+|+.+..+..+.... ..|.... ..+..++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 11110 000 0 145578899999999999999999999885432211 1111111 1234566
Q ss_pred EecCCCcEEEEEccCCceeeEEeeccccCc-eE-----EEEEecCCCEEEEEeCCCcEEEEEcccceEEE-EEEcCccE
Q psy17610 226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSS-VS-----VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI-IMILPSMI 297 (515)
Q Consensus 226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~-----~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~ 297 (515)
.+..+..+.+.+- ++. .....+...... +. ....+.|+.+ +.++.||.|..+|..++..+. ......++
T Consensus 170 ig~~~y~v~~~~~-sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~~~l~sPv 245 (339)
T 2be1_A 170 IGKTIFELGIHSY-DGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPTFPGII 245 (339)
T ss_dssp EEEEEEECEECCT-TSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCCCSSCE
T ss_pred EecceEEEEEECC-CCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEeecCCCCe
Confidence 6666655555442 111 111011000000 00 0000123555 557889999999998888766 44444443
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.012 Score=51.98 Aligned_cols=226 Identities=8% Similarity=-0.052 Sum_probs=111.1
Q ss_pred EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----C-------CcEEEEeCCCCceeEEEEe
Q psy17610 96 VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----K-------NDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 96 l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d-------~~i~iw~~~~~~~~~~~~~ 164 (515)
++.|+ ..+..||..+++-...................++..++.++. + ..+..||..+.+-...-..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34444 479999998854222222211122222233346667777763 1 1267788876542111011
Q ss_pred cCeEEEEEEEeeCCCEEEEEeCC--------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-C-----
Q psy17610 165 MNMICACIVFTYDGKAILSGWND--------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-E----- 230 (515)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d----- 230 (515)
........+..-++..++.|+.+ ..+.+||+.+++....-..+....-.+++. .+++.++.|+. +
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBC
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCccc
Confidence 11111111112256666666632 458899998876543221111111112222 35667777765 2
Q ss_pred CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCcc--EEEEEEc
Q psy17610 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSM--IMSAAYH 303 (515)
Q Consensus 231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~--~~~~~~~ 303 (515)
..+.+||+.+........++.....-..+ .-+++.++.|+.++ .+.+||+.+.+-...-..+.+ -.+++.
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 241 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS- 241 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-
Confidence 46889998766555443333222222222 23667777777654 478888877654443322221 112222
Q ss_pred CCCcEEEEEECC--------------CeEEEEeCCCCc
Q psy17610 304 PSEVQLITCSTN--------------KMIDYWETCDGS 327 (515)
Q Consensus 304 ~~~~~l~~~~~~--------------~~i~~~d~~~~~ 327 (515)
-+++.++.|+.+ ..+.+||+.+.+
T Consensus 242 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 255666666653 235667766654
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.61 E-value=0.015 Score=51.15 Aligned_cols=225 Identities=10% Similarity=0.085 Sum_probs=115.3
Q ss_pred EEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEecCCCC-C
Q psy17610 138 SVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIPNAHN-R 210 (515)
Q Consensus 138 ~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~~-~ 210 (515)
.++.++. ...+.+||..+.+-...-..........+..-++..++.|+.+ ..+.+||+.+++....-..+.. .
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 3444443 3568888887754221110011111111112366666777654 6788999988865443221111 1
Q ss_pred CeEEEEEcCCCCEEEEecCC------CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---------CC
Q psy17610 211 GVTALAITQDGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---------DG 275 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~ 275 (515)
....+.+ +++.++.|+.+ ..+.+||...........++.....-..+ . -+++.++.|+. -.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV-E-ANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE-E-ETTEEEEECCEESCTTTCEECC
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE-E-ECCEEEEECCCCCCCCcccccc
Confidence 1222222 56677777765 46889998766554443333222222222 2 35666666653 34
Q ss_pred cEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcC
Q psy17610 276 TCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVD 347 (515)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~ 347 (515)
.+.+||+.+.+-...-..+.+ -.+++.. +++.++.|+.+ ..+.+||+.+.+-...-..+.. ....++.+
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 588999887754433222221 1122222 56666666543 4588899887643322111111 12222233
Q ss_pred CCCEEEEEcCC-----CeEEEEEccCC
Q psy17610 348 DGKYFLTGGAD-----QIVKMWMYREG 369 (515)
Q Consensus 348 ~~~~l~~~~~d-----g~i~i~d~~~~ 369 (515)
++++++.|+.+ ..+.+||..+.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 67788888754 46778887665
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.55 E-value=0.018 Score=51.03 Aligned_cols=178 Identities=12% Similarity=0.065 Sum_probs=91.6
Q ss_pred eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----CC-------cEEEEEccCCceeeEEeeccccCceE
Q psy17610 189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----EG-------QVRIWKLTRESQSLQCVLKEHTSSVS 257 (515)
Q Consensus 189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~~~~~~~~~v~ 257 (515)
.+..||..+++....-...............++..++.|+. ++ .+..||..+........++......
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~- 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF- 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-
Confidence 37899998887644221111122223333456778888873 12 1677887655544333332222222
Q ss_pred EEEEecCCCEEEEEeCC-------CcEEEEEcccceEEEEEEcCccE--EEEEEcCCCcEEEEEEC------CCeEEEEe
Q psy17610 258 VIQIKSDSKEAMSASTD-------GTCVLWDLIKSTRLIIMILPSMI--MSAAYHPSEVQLITCST------NKMIDYWE 322 (515)
Q Consensus 258 ~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~------~~~i~~~d 322 (515)
+++. -++..++.|+.+ ..+.+||..+.+-...-..+.+. .+++. .+++.++.|+. ...+.+||
T Consensus 104 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEc
Confidence 2222 256677777753 24778888776544433333221 12222 45666666653 23588999
Q ss_pred CCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCe
Q psy17610 323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGV 370 (515)
Q Consensus 323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 370 (515)
+.+.+-...-..+....-.+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 88765433222111111112222 256777777643 357788887653
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.54 E-value=0.012 Score=51.90 Aligned_cols=226 Identities=8% Similarity=0.048 Sum_probs=114.8
Q ss_pred CCCEEEEEeC----CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----C-----CcEEEEEccCCce
Q psy17610 177 DGKAILSGWN----DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----E-----GQVRIWKLTRESQ 243 (515)
Q Consensus 177 ~~~~l~~~~~----dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~~ 243 (515)
++..++.|+. -..+.+||+.+++....-..+....-.+++.. ++..++.|+. + ..+.+||+.+...
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 4555556553 23688899888765433211111111122222 5667777765 2 4688889866554
Q ss_pred eeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-
Q psy17610 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN- 315 (515)
Q Consensus 244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~- 315 (515)
.....++........+. -+++.++.|+.+ ..+.+||+.+.+-......+.+ -.+++.. ++..++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 179 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDG 179 (308)
T ss_dssp EECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred eECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCC
Confidence 44433332222222222 256666666543 3688899877654433222221 1122222 56666666653
Q ss_pred ----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeee--eccCCCCCee
Q psy17610 316 ----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCF--VGIGHAASIT 383 (515)
Q Consensus 316 ----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~ 383 (515)
..+..||+.+.+-...-..+.. .....+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+........
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG 257 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence 4588899877653322111111 11222222 67788888764 468999987764322 1211111122
Q ss_pred EEEECCCCcEEEEEeCC-----CcEEEEeCCC
Q psy17610 384 KIKISPDKKVIVSVSAD-----GGIFLWTFPE 410 (515)
Q Consensus 384 ~~~~~~~~~~l~~~~~d-----g~i~iw~~~~ 410 (515)
.+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 258 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 258 ITVH--QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred EEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 2222 56777777654 3466777654
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.53 E-value=0.0086 Score=62.25 Aligned_cols=261 Identities=10% Similarity=0.077 Sum_probs=152.1
Q ss_pred CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEE
Q psy17610 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQL 309 (515)
Q Consensus 230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (515)
..+|.|.|+..+.......+.+ .+.-.+|..+.++.-. ..++.++|+.+...+.....+.+|.--.|-.....-
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 120 (1630)
T ss_pred CceEEEEECCCCCCcccccccc-----hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeE
Confidence 3478888886543322222211 2333567766555544 678999999999999999988888877776655443
Q ss_pred EEEECCCeEEEEeCCCC-ceEEEEecC---CCccEEEEEEcCCCCEEEEEc-------CCCeEEEEEccCCeeeeeccCC
Q psy17610 310 ITCSTNKMIDYWETCDG-SIIRSLEGS---DVAAVNCVDFVDDGKYFLTGG-------ADQIVKMWMYREGVPCFVGIGH 378 (515)
Q Consensus 310 ~~~~~~~~i~~~d~~~~-~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~ 378 (515)
++ .+..|+-|++... .+.+.+..+ ....|..-..+++.++++..+ -.|.+.+|..+.+ ..+.+.||
T Consensus 121 lV--T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegh 197 (1630)
T 1xi4_A 121 LV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 197 (1630)
T ss_pred EE--cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHh
Confidence 33 3457999999643 333333222 125677778888888877543 3478899988653 34455666
Q ss_pred CCCeeEEEEC--C-CCcEEEEEeC---CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC
Q psy17610 379 AASITKIKIS--P-DKKVIVSVSA---DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS 452 (515)
Q Consensus 379 ~~~i~~~~~~--~-~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 452 (515)
.+.-..+... + ....++.+.. .+.++|-++........ ....+. ...............++..|+.
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~---~f~kk~-----~~~~~~~~~~~Dfpv~~~vs~k 269 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ---PFPKKA-----VDVFFPPEAQNDFPVAMQISEK 269 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC---CCcccc-----ccccCCcccccCcceEEEeccc
Confidence 6554444332 1 1223333322 26899998865411110 110000 0001111122345678888998
Q ss_pred CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE
Q psy17610 453 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 508 (515)
Q Consensus 453 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v 508 (515)
...+...+.-|.+++||+.+|.++..-+-.. .+|...+..+...-++.....|.|
T Consensus 270 ~g~iy~itk~G~~~~~d~~t~~~i~~~ris~-~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred cCEEEEEecCceEEEEecccchhhhhccccC-CceEEeccCCCCCceEEEcCCceE
Confidence 8899999999999999999998876544332 444444433332233333344433
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.53 E-value=0.016 Score=51.08 Aligned_cols=228 Identities=9% Similarity=0.033 Sum_probs=114.3
Q ss_pred CCCEEEEEecC----ceEEEEECCCCceeEEeeccCcc-CeEEEEeCCCCcEEEEEec----C-----CcEEEEeCCCCc
Q psy17610 92 VNNKVFVGTVN----CEIFLIDMNSGFTLTLVNTCHTS-AIYDLQFPVNFSSVFATCS----K-----NDIRIWSVRTLN 157 (515)
Q Consensus 92 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~ 157 (515)
++.+++.|+.+ ..+.+||..+.. -......... .-.+++.. ++..++.++. + +.+.++|..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGT-WLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCe-EeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45666666632 468999988742 2222110000 01122222 4555555554 2 458888887654
Q ss_pred eeEE--EEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCceEEEecCCCC-CCeEEEEEcCCCCEEEEecC
Q psy17610 158 ELLR--ISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGKLKFIIPNAHN-RGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 158 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~ 229 (515)
-... +......-..+. -+++.++.|+.+ ..+.+||+.+.+....-..... ..-..+.+ ++..++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 2211 111111111122 256666666533 4688999988765433211111 11222222 5667777765
Q ss_pred C-----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--E
Q psy17610 230 E-----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--I 297 (515)
Q Consensus 230 d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~ 297 (515)
+ ..+.+||+..........++........+.+ +++.++.|+.+ ..+.+||+.+.+-......+.+ -
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA 255 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence 4 4688999876655444333322222222222 66677777654 4689999887654433222221 1
Q ss_pred EEEEEcCCCcEEEEEECC-----CeEEEEeCCCCce
Q psy17610 298 MSAAYHPSEVQLITCSTN-----KMIDYWETCDGSI 328 (515)
Q Consensus 298 ~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~ 328 (515)
.+++. -+++.++.|+.+ ..+.+||+.+.+-
T Consensus 256 ~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 256 LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 12222 256666666643 3577788766543
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0074 Score=53.19 Aligned_cols=192 Identities=11% Similarity=0.110 Sum_probs=106.1
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc--C-CCCEEEEe-cCCCcEEEEEccCCceeeEEeecc--c
Q psy17610 179 KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT--Q-DGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKE--H 252 (515)
Q Consensus 179 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~--~ 252 (515)
..+++++.||.|.-+|.++|+....+......++....-. + ++..++.. +.||.+..++..++..+....... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 3688999999999999999999988854321233221110 1 22333333 579999999975443322222221 1
Q ss_pred cCceEE---EEE-----ecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE--------EEEEc-----CCCcEEEE
Q psy17610 253 TSSVSV---IQI-----KSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM--------SAAYH-----PSEVQLIT 311 (515)
Q Consensus 253 ~~~v~~---~~~-----~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~l~~ 311 (515)
..++.. ... ...+..+++++.+|.+...|+++++.+..+....+.. +.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112221 000 0145678899999999999999999999887653211 11110 12356777
Q ss_pred EECCCeEEEEeCCCCceEEEEe-----cCCCc-cE-EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee
Q psy17610 312 CSTNKMIDYWETCDGSIIRSLE-----GSDVA-AV-NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF 373 (515)
Q Consensus 312 ~~~~~~i~~~d~~~~~~~~~~~-----~~~~~-~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 373 (515)
+..+..+.+.+ ++++ +..+. ..... .+ ..-..+.|+.+ +.++.||.|.-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777766 4443 21111 10000 00 00001224555 446778888888887777665
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.47 E-value=0.05 Score=48.19 Aligned_cols=231 Identities=8% Similarity=0.069 Sum_probs=125.7
Q ss_pred CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--Eec---CCCCCCeEEEEEcCC---CCEEEEe---cCCCcEE
Q psy17610 166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIP---NAHNRGVTALAITQD---GTRLLSG---GGEGQVR 234 (515)
Q Consensus 166 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~ 234 (515)
-.....++|.|+|..+++--..|.|++++..+++... .++ .........|+++|+ +..|... ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3445789999999866655448999999876665422 121 123566899999995 3444432 2345566
Q ss_pred EEEccCC---------ceeeEEeec-cccCceEEEEEecCCCEEEEEeC-------------CCcEEEEEcccce-----
Q psy17610 235 IWKLTRE---------SQSLQCVLK-EHTSSVSVIQIKSDSKEAMSAST-------------DGTCVLWDLIKST----- 286 (515)
Q Consensus 235 iw~~~~~---------~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~----- 286 (515)
-|.+... .......+. .....-..|.|.|||.+.++.+. .|.|.-.+....-
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665431 111111222 11123457999999987777543 2444444443210
Q ss_pred --EEEEEE-cCccEEEEEEcCCCcEEEEEEC-CC--eEEEEe--------CCCC--------ceEEEEecCCCccEEEEE
Q psy17610 287 --RLIIMI-LPSMIMSAAYHPSEVQLITCST-NK--MIDYWE--------TCDG--------SIIRSLEGSDVAAVNCVD 344 (515)
Q Consensus 287 --~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~--~i~~~d--------~~~~--------~~~~~~~~~~~~~i~~~~ 344 (515)
....+. .......++|+|++.++++-.. ++ .|.... ...+ .++..+..++ .....++
T Consensus 191 f~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~-~ap~G~~ 269 (347)
T 3das_A 191 FPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE-ASPSGIA 269 (347)
T ss_dssp STTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT-CCEEEEE
T ss_pred CCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC-CCCcceE
Confidence 001111 2234678899998776554322 22 222221 0011 1122222221 2455677
Q ss_pred EcCCCCEEEEEcCCCeEEEEEccCCee----eeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610 345 FVDDGKYFLTGGADQIVKMWMYREGVP----CFVGIGHAASITKIKISPDKKVIVSVS 398 (515)
Q Consensus 345 ~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 398 (515)
|. +|.++...-..+.|....+..... ...+.+....+..++..|||.++++.+
T Consensus 270 ~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 270 YA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 76 466666666666676667655432 223344456889999999998766654
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.46 E-value=0.053 Score=48.07 Aligned_cols=244 Identities=10% Similarity=0.019 Sum_probs=127.9
Q ss_pred cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcCC---CcEEEEEE---CCCeEE
Q psy17610 253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHPS---EVQLITCS---TNKMID 319 (515)
Q Consensus 253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~l~~~~---~~~~i~ 319 (515)
-.....++|.|+|..+++--..|.|++++...++....... ......++++|+ +..|++.. .+..|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 44567899999998766655589999998765554322221 345789999996 44554432 345666
Q ss_pred EEeCCCC----------ceE-EEEecCCCccEEEEEEcCCCCEEEEEcC-------------CCeEEEEEccCC------
Q psy17610 320 YWETCDG----------SII-RSLEGSDVAAVNCVDFVDDGKYFLTGGA-------------DQIVKMWMYREG------ 369 (515)
Q Consensus 320 ~~d~~~~----------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~------ 369 (515)
-|....+ +.+ ..+..........++|.|||.++++.+. .|.|.-++....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665441 111 1232211133457999999987777542 244444454321
Q ss_pred ---eeeeeccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc-ccE
Q psy17610 370 ---VPCFVGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP-SMI 444 (515)
Q Consensus 370 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i 444 (515)
..+.. .+|. ....++|+|++.+.++=. .|+.=.|-.+.......-....-. ..............+. ...
T Consensus 191 f~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~---~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 191 FPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGK---GGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp STTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSS---CCCTTCCCCSEEECTTTCCE
T ss_pred CCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCC---CCCccccCCcEecCCCCCCC
Confidence 11111 2444 346799999877555432 233223332322221100000000 0000000011111111 245
Q ss_pred EEeeeccCCcEEEEeecCCeEEEEecCCCee----eeeecccccceEEEEEEcCCCcEEEEee
Q psy17610 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSI----IRSLEGSDVAAVNCVDFVDDGKYFLTGG 503 (515)
Q Consensus 445 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 503 (515)
..++|. +|..+...-..+.|....+..+.. ...+.+.. .++..++..|||.++++.+
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~-gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEY-GRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTS-SCEEEEEEEETTEEEEEEC
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCC-CCccEEEECCCCcEEEEEc
Confidence 666776 455555555566676666655432 22333333 7899999999998776643
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.44 E-value=0.0097 Score=61.88 Aligned_cols=255 Identities=10% Similarity=0.093 Sum_probs=148.6
Q ss_pred CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181 (515)
Q Consensus 102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 181 (515)
..+|.|.|+.++..+.+.... -.+.-.+|..+ +++.-...++.|+|+++.+.+....-.. +|..=.|-.+. .|
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~----AdsAIMnP~~~-iiALrag~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~-~l 119 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASK-VIALKAGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV 119 (1630)
T ss_pred CceEEEEECCCCCCccccccc----chhhccCCCcc-eEEEecCCeEEEeehHHhhhhcccccCC-CceEEEecCCC-ee
Confidence 347999999886554332111 12334677754 4444457899999999988888776544 45444554333 34
Q ss_pred EEEeCCCeEEEEecCCCceEEEecCCC----CCCeEEEEEcCCCCEEEEec-------CCCcEEEEEccCCceeeEEeec
Q psy17610 182 LSGWNDGFIRCFTPQSGKLKFIIPNAH----NRGVTALAITQDGTRLLSGG-------GEGQVRIWKLTRESQSLQCVLK 250 (515)
Q Consensus 182 ~~~~~dg~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~~ 250 (515)
+..+ +..|.-|++........+...| ...|..-..+++.++++..+ -.|.+.+|..+. ...+.+.
T Consensus 120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er---~~sQ~ie 195 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIE 195 (1630)
T ss_pred EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc---ccchhhh
Confidence 4443 4569999997533222221223 35577777788888877433 348899999753 3344566
Q ss_pred cccCceEEEEEe--cC-CCEEEEEeC---CCcEEEEEcccc---e-----EEEEEEcC-----ccEEEEEEcCCCcEEEE
Q psy17610 251 EHTSSVSVIQIK--SD-SKEAMSAST---DGTCVLWDLIKS---T-----RLIIMILP-----SMIMSAAYHPSEVQLIT 311 (515)
Q Consensus 251 ~~~~~v~~~~~~--~~-~~~l~~~~~---d~~i~iwd~~~~---~-----~~~~~~~~-----~~~~~~~~~~~~~~l~~ 311 (515)
||......+... +. ...+..+.. .+.+.+.++... . ....+..+ .-..++..++.-..+..
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 776655444432 11 122222222 267888887443 1 11111111 12566777888888889
Q ss_pred EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
.+.-|.+++||+.++.++..-+-.. ..|...+..+...-++.....|.|.-..+..
T Consensus 276 itk~G~~~~~d~~t~~~i~~~ris~-~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EecCceEEEEecccchhhhhccccC-CceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 9999999999999999887655443 4444333333322233344556555544443
No 337
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.40 E-value=0.014 Score=52.39 Aligned_cols=144 Identities=10% Similarity=0.068 Sum_probs=91.5
Q ss_pred CCcEEEEEecCCcEEEEeCCCCceeEEEEec----CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc-----------
Q psy17610 135 NFSSVFATCSKNDIRIWSVRTLNELLRISVM----NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK----------- 199 (515)
Q Consensus 135 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~----------- 199 (515)
+|..++.+- ++.||.-++.....-+.+... -..+..+..+|+|++||..+. ..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccc
Confidence 444444433 366666666644444445443 124677999999999988764 468888776321
Q ss_pred -eEEEecCC-----CCCCeEEEEEcC---CCCEEEEecCCCcEEEEEccCCceeeEEeec---------cccCceEEEEE
Q psy17610 200 -LKFIIPNA-----HNRGVTALAITQ---DGTRLLSGGGEGQVRIWKLTRESQSLQCVLK---------EHTSSVSVIQI 261 (515)
Q Consensus 200 -~~~~~~~~-----~~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~~~~~v~~~~~ 261 (515)
....+..+ ...+|..+.|+| .+..|++-..|+.|++||+......+. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 11122111 357799999999 456899999999999999975333222 222 12256888999
Q ss_pred ecCCCEEEEEe--CCCcEEEEE
Q psy17610 262 KSDSKEAMSAS--TDGTCVLWD 281 (515)
Q Consensus 262 ~~~~~~l~~~~--~d~~i~iwd 281 (515)
.+++-.|...+ ..|.|+-.-
T Consensus 188 g~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEES
T ss_pred cCCCcEEEEEecCCCCCEEEEC
Confidence 88777676655 667666543
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.33 E-value=0.012 Score=53.22 Aligned_cols=239 Identities=10% Similarity=-0.008 Sum_probs=112.7
Q ss_pred CCCEEEEEec-CceEEEEECCCC-ceeEEe--ec-cCccCeEEEEeCCCCcEEEEEec-C---------CcEEEEeCCCC
Q psy17610 92 VNNKVFVGTV-NCEIFLIDMNSG-FTLTLV--NT-CHTSAIYDLQFPVNFSSVFATCS-K---------NDIRIWSVRTL 156 (515)
Q Consensus 92 ~~~~l~~~~~-d~~i~iw~~~~~-~~~~~~--~~-~h~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iw~~~~~ 156 (515)
++.+++.|+. ...+.++|..+. ..-... +. .....-..+.+ ++..++.++. + +.+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666654 357999998631 111111 11 01111122222 4556666554 2 45888888765
Q ss_pred ceeEEEEec-CeEEEEEEEeeCCCEEEEEeCC---------------------------------------CeEEEEecC
Q psy17610 157 NELLRISVM-NMICACIVFTYDGKAILSGWND---------------------------------------GFIRCFTPQ 196 (515)
Q Consensus 157 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~~~~~~ 196 (515)
+-...-... .......+...+++.++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 421111001 1111111222567777777754 578999998
Q ss_pred CCceEEEecCCCCCCe-EEEEEcCCCCEEEEecC------CCcEEEEEc--cCCceeeEEeeccccCceEEEEEecCCCE
Q psy17610 197 SGKLKFIIPNAHNRGV-TALAITQDGTRLLSGGG------EGQVRIWKL--TRESQSLQCVLKEHTSSVSVIQIKSDSKE 267 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~------d~~i~iw~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 267 (515)
+.+....-.......- .+++.. +++.++.|+. ...+..||+ .+........+..........+...+++.
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 8765443222211111 222322 5666677664 235777876 33333333222211111111122345667
Q ss_pred EEEEeCC----------------------CcEEEEEcccceEEEEEEcCcc-EEEEEEcCCCcEEEEEECCC------eE
Q psy17610 268 AMSASTD----------------------GTCVLWDLIKSTRLIIMILPSM-IMSAAYHPSEVQLITCSTNK------MI 318 (515)
Q Consensus 268 l~~~~~d----------------------~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~------~i 318 (515)
++.|+.+ ..+.+||+.+.+-...-..+.+ ....+...+++.++.|+.++ .+
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v 335 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDS 335 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEE
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeE
Confidence 7777632 2477888876543333333321 11222334677777777542 35
Q ss_pred EEEeCCCCceEEEEe
Q psy17610 319 DYWETCDGSIIRSLE 333 (515)
Q Consensus 319 ~~~d~~~~~~~~~~~ 333 (515)
.++++++++.+....
T Consensus 336 ~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 336 VLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEC-CCSCEEEC-
T ss_pred EEEEEcCcEeEeeec
Confidence 666777777665544
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.31 E-value=0.03 Score=45.26 Aligned_cols=104 Identities=9% Similarity=-0.023 Sum_probs=65.8
Q ss_pred cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610 296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 369 (515)
.+..++|+|++.+.++ .+|.++-.+..+... -..+-...-....++.|.|+|.+.++ .||.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 6779999998886666 778888777655221 12222111122478999999998887 5698887775332
Q ss_pred eeee-------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610 370 VPCF-------VGIGHAASITKIKISPDKKVIVSVSADGGIFL 405 (515)
Q Consensus 370 ~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 405 (515)
..-. .-..-=..+..|.+.|+|.+.+.. |+.+.-
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 1110 001111467999999999877666 777543
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.27 E-value=0.033 Score=49.25 Aligned_cols=181 Identities=11% Similarity=0.014 Sum_probs=87.2
Q ss_pred eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----CC-------cEEEEeCCCCceeEEEEecCeEE-EE
Q psy17610 104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----KN-------DIRIWSVRTLNELLRISVMNMIC-AC 171 (515)
Q Consensus 104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~~~~~~~v-~~ 171 (515)
.+..||..+++-...........-.......++..++.++. ++ .+..+|..+.+-...-....... .+
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 37888888753222211111111222223345566777762 11 16677877654221101011110 11
Q ss_pred EEEeeCCCEEEEEeCC-------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC------CCcEEEEEc
Q psy17610 172 IVFTYDGKAILSGWND-------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG------EGQVRIWKL 238 (515)
Q Consensus 172 ~~~~~~~~~l~~~~~d-------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~ 238 (515)
++ .-++..++.|+.+ ..+.+||+.+.+....-..+....-.+++. .+++.++.|+. -..+.+||+
T Consensus 105 ~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 LG-EVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EE-EETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEET
T ss_pred eE-EECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcC
Confidence 11 1256666677653 357888988876554321111111112222 35667777764 235899998
Q ss_pred cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEE
Q psy17610 239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRL 288 (515)
Q Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 288 (515)
.+........++...... +++. -+++.++.|+.+ ..+.+||+.+.+-.
T Consensus 183 ~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 766555443333222222 2222 356777777653 34678888776543
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.21 E-value=0.14 Score=47.70 Aligned_cols=225 Identities=16% Similarity=0.197 Sum_probs=138.6
Q ss_pred EEEecCCcEEEEeCCCCceeEEEEecC-------------------------eEE--EEEEEe---eCCCEEEEEeC-CC
Q psy17610 140 FATCSKNDIRIWSVRTLNELLRISVMN-------------------------MIC--ACIVFT---YDGKAILSGWN-DG 188 (515)
Q Consensus 140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~-------------------------~~v--~~~~~~---~~~~~l~~~~~-dg 188 (515)
.+++..|.++|+-+.+++++.++.... +.. ..+++. .||++|+.-.. +.
T Consensus 74 ~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan~ 153 (638)
T 3sbq_A 74 WSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKANS 153 (638)
T ss_dssp EECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTTT
T ss_pred eecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCCc
Confidence 344448999999999999888874210 001 123332 36788888764 56
Q ss_pred eEEEEecCCCceEEEecCCCCCCeEEEEEc--CCCCEEEEecC-------CCcEEEEEccCCc-eeeEEeecccc-----
Q psy17610 189 FIRCFTPQSGKLKFIIPNAHNRGVTALAIT--QDGTRLLSGGG-------EGQVRIWKLTRES-QSLQCVLKEHT----- 253 (515)
Q Consensus 189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~i~iw~~~~~~-~~~~~~~~~~~----- 253 (515)
.|...+++..++...+..+....+..++|- |+..+++.+++ ||.. ..++... ......+.+.+
T Consensus 154 RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 154 RVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp EEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEEEEEEEETTTCSEEE
T ss_pred ceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhceEEEEEcCCccEEEE
Confidence 788889999888777766788889999996 67788887764 2221 1001110 00000011111
Q ss_pred -----CceEEEEEecCCCEEEEEeCCC----------------------------------------cEEEEEccc----
Q psy17610 254 -----SSVSVIQIKSDSKEAMSASTDG----------------------------------------TCVLWDLIK---- 284 (515)
Q Consensus 254 -----~~v~~~~~~~~~~~l~~~~~d~----------------------------------------~i~iwd~~~---- 284 (515)
+....+...+++++.++.+.+. .+.+.|.+.
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 1222334456677766655321 233444433
Q ss_pred -ceEEEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCC------ce-------EEEEecCCCccEEEEEEcCCC
Q psy17610 285 -STRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDG------SI-------IRSLEGSDVAAVNCVDFVDDG 349 (515)
Q Consensus 285 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~------~~-------~~~~~~~~~~~i~~~~~~~~~ 349 (515)
......+..+.....+..+|||+++++++. +.++.++|.... +. ..+.+. .-.....+|.++|
T Consensus 312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~--GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL--GLGPLHTTFDGRG 389 (638)
T ss_dssp CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC--CSCEEEEEECSSS
T ss_pred CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC--CCcccEEEECCCC
Confidence 123344455566788899999999988765 788999998742 11 223332 2456788999999
Q ss_pred CEEEEEcCCCeEEEEEccC
Q psy17610 350 KYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 350 ~~l~~~~~dg~i~i~d~~~ 368 (515)
....+-.-|..|.-|++..
T Consensus 390 ~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEEETTTTEEEEEEHHH
T ss_pred ceEeeeeecceEEEEeccH
Confidence 7667777899999999865
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.14 E-value=0.039 Score=49.76 Aligned_cols=193 Identities=10% Similarity=0.052 Sum_probs=95.8
Q ss_pred CCCEEEEEeC-C---------CeEEEEecCCCceEEEecCC-CCCCeEEEEEcCCCCEEEEecCC---------------
Q psy17610 177 DGKAILSGWN-D---------GFIRCFTPQSGKLKFIIPNA-HNRGVTALAITQDGTRLLSGGGE--------------- 230 (515)
Q Consensus 177 ~~~~l~~~~~-d---------g~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d--------------- 230 (515)
+++.++.|+. + ..+.+||+.+.+........ ....-.++.. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 5666666655 1 46889999887654432211 1111122222 467777788754
Q ss_pred ------------------------CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC------CCcEEEE
Q psy17610 231 ------------------------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST------DGTCVLW 280 (515)
Q Consensus 231 ------------------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw 280 (515)
..+.+||..+........++.....-.+++. -+++.++.|+. ...+..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEE
Confidence 4788999876666655444321111122332 25566666653 2356777
Q ss_pred Ec--ccceEEEEEEcCcc---EEEEEEcCCCcEEEEEECC----------------------CeEEEEeCCCCceEE--E
Q psy17610 281 DL--IKSTRLIIMILPSM---IMSAAYHPSEVQLITCSTN----------------------KMIDYWETCDGSIIR--S 331 (515)
Q Consensus 281 d~--~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~----------------------~~i~~~d~~~~~~~~--~ 331 (515)
|+ .+.+-......+.+ ....+...+++.++.|+.+ ..+.+||+.+.+-.. .
T Consensus 223 d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 223 DFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp ECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred EecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 76 33332221111111 1111233356666666532 257789987654332 2
Q ss_pred EecCCCccEEEEEEcCCCCEEEEEcCCC------eEEEEEccCCeeeee
Q psy17610 332 LEGSDVAAVNCVDFVDDGKYFLTGGADQ------IVKMWMYREGVPCFV 374 (515)
Q Consensus 332 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~ 374 (515)
+.... ... .+...++++++.|+.++ .+.++++++++.+..
T Consensus 303 ~p~~r-~~~--~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 303 LSQGR-AYG--VSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CSSCC-BSS--EEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCc-ccc--eeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 22221 111 22334678888888543 456667777665543
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.92 E-value=0.11 Score=48.47 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=39.6
Q ss_pred ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee--eeeccC------CCCCeeEEEECCC---CcEEEEE
Q psy17610 338 AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP--CFVGIG------HAASITKIKISPD---KKVIVSV 397 (515)
Q Consensus 338 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~------~~~~i~~~~~~~~---~~~l~~~ 397 (515)
.....|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|..+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 5667999999999777765555788887654533 222221 2456779999995 4444444
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.86 E-value=0.2 Score=43.57 Aligned_cols=242 Identities=7% Similarity=0.028 Sum_probs=134.4
Q ss_pred CCCCcEEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC--------------CeEEEEecC
Q psy17610 133 PVNFSSVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND--------------GFIRCFTPQ 196 (515)
Q Consensus 133 ~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~~~~~~ 196 (515)
++++..+..... ++.|...+.+ |.....+... . +--+++++++|+-+... ..|+..+++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 345667766653 4556666654 3344445432 2 24568899988877543 367777877
Q ss_pred CCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-
Q psy17610 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST- 273 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 273 (515)
.++..... . .. ...|+++++.|+-.. .++.-.||.+........ .+..+.. .+++++++.|+..+.
T Consensus 97 g~~~~~l~-~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 97 GHGSTVLD-P---DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp SCCCEEEE-C---SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTT
T ss_pred CCcceEee-c---CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCC
Confidence 76644332 1 11 236777888888665 344444554432322222 2222222 346788888887665
Q ss_pred CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC--CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610 274 DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN--KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY 351 (515)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 351 (515)
...|...++..+....... .... ..+.|++.+|+-.... ..|..-++..... ..+.. ..+ ..++|++++
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~---~~~--~~~~~~g~~ 236 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE---ANI--EHYNVYGSL 236 (302)
T ss_dssp TCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC---SCE--EEEEEETTE
T ss_pred CceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC---CCc--ceEEECCCE
Confidence 5788888887666554433 2222 3456899888876654 3677777765543 33322 223 347788888
Q ss_pred EEEEc--CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEE
Q psy17610 352 FLTGG--ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIF 404 (515)
Q Consensus 352 l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~ 404 (515)
|+... ..+.|..-++..........+ .+.. +++.+.+|+-... .+.|.
T Consensus 237 Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~i~ 287 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDGTGFKELAKG---EFCN--INVTSQYVYFTDFVSNKEY 287 (302)
T ss_dssp EEEEECSSSCEEEEEETTSCCCEEEEES---CEEE--EEECSSEEEEEETTTCCEE
T ss_pred EEEEECCCCcEEEEEECCCCccEEeeCC---ccce--EEEeCCEEEEEECCCCeEE
Confidence 87653 345677777754332222222 2333 3445566665543 34443
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.75 E-value=0.15 Score=50.48 Aligned_cols=195 Identities=13% Similarity=0.121 Sum_probs=104.9
Q ss_pred CCcEEEEEecC----CcEEEEeCCCCceeEEE-E-----ecCe-EEEEEEEee-CCCEEEEEeCC------CeEEEEecC
Q psy17610 135 NFSSVFATCSK----NDIRIWSVRTLNELLRI-S-----VMNM-ICACIVFTY-DGKAILSGWND------GFIRCFTPQ 196 (515)
Q Consensus 135 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~-~-----~~~~-~v~~~~~~~-~~~~l~~~~~d------g~i~~~~~~ 196 (515)
++..++.++.+ +.+.++|..+++-...- . .... .-.+++..+ +++.++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45566666542 45888888776532221 1 0111 112233333 66677777643 357889988
Q ss_pred CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCceeeEEe---eccccCceEEEEEecC-CCEEEE
Q psy17610 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQSLQCV---LKEHTSSVSVIQIKSD-SKEAMS 270 (515)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~ 270 (515)
+.+....-.......-.+++...++..++.|+.++ .+.+||..+........ .+........+.+..+ ++.++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 87654332111111122333334788888887654 68999987665544432 2222222233555555 566677
Q ss_pred EeC--C-----CcEEEEEcccce------EEEEEEcC-c--cEEEEEEcCCCcEEEEEEC--------CCeEEEEeCCCC
Q psy17610 271 AST--D-----GTCVLWDLIKST------RLIIMILP-S--MIMSAAYHPSEVQLITCST--------NKMIDYWETCDG 326 (515)
Q Consensus 271 ~~~--d-----~~i~iwd~~~~~------~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~--------~~~i~~~d~~~~ 326 (515)
|+. + ..+..||+.+.+ -......+ . .-.+++...+++.++.|+. ...+.+||+.+.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 765 2 358899988776 22222211 1 1223333333677777764 345899999877
Q ss_pred ceE
Q psy17610 327 SII 329 (515)
Q Consensus 327 ~~~ 329 (515)
+-.
T Consensus 637 ~W~ 639 (695)
T 2zwa_A 637 TLT 639 (695)
T ss_dssp EEE
T ss_pred eEE
Confidence 544
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.75 E-value=0.25 Score=43.04 Aligned_cols=210 Identities=10% Similarity=0.096 Sum_probs=121.1
Q ss_pred ecCCCEEEEEe--cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC--------------CcEEEEeC
Q psy17610 90 NPVNNKVFVGT--VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK--------------NDIRIWSV 153 (515)
Q Consensus 90 s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------------~~i~iw~~ 153 (515)
++++.+|+... .++.|...+.+.. ...++.. . .+--+++++.+|+.+... ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~-~~~~l~~---~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGS-NIHKLSN---D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSC-SCEEEEE---E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCC-CCEEccC---C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 45677777765 2567888887653 3444432 1 123457888898888763 35777777
Q ss_pred CCCceeEEEEecCeEEEEEEEeeCCCEEEEEe----CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610 154 RTLNELLRISVMNMICACIVFTYDGKAILSGW----NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229 (515)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 229 (515)
+.++. ..+.... +..|+++++.|+-.. ....|...++...+..... .+.. ..++++++.|.-.+.
T Consensus 96 dg~~~-~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt--~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 96 NGHGS-TVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIK--NHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp TSCCC-EEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEE--SSCC----CCSEEETTEEEEECT
T ss_pred CCCcc-eEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEe--CCCc----eEeeEECCEEEEEeC
Confidence 76543 3333222 236788999988776 3445666677654443333 2222 345677887775554
Q ss_pred -CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC--cEEEEEcccceEEEEEEcCccEEEEEEcCCC
Q psy17610 230 -EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG--TCVLWDLIKSTRLIIMILPSMIMSAAYHPSE 306 (515)
Q Consensus 230 -d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (515)
...|..-++.....+.+ +.+ ... ..+.|++.+|+-....+ .|..-++........ ....+ ..++|++
T Consensus 165 g~~~Iy~~~l~g~~~~~l--~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L--t~~~~--~~~~~~g 234 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALF--YDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL--TEANI--EHYNVYG 234 (302)
T ss_dssp TTCCEEEEETTTTEEEEE--ECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC--SCSCE--EEEEEET
T ss_pred CCceEEEEECCCCCEEEE--eCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE--eCCCc--ceEEECC
Confidence 56777777754332222 222 222 34568888888766543 566666654443222 22233 3377888
Q ss_pred cEEEEEEC--CCeEEEEeCCCC
Q psy17610 307 VQLITCST--NKMIDYWETCDG 326 (515)
Q Consensus 307 ~~l~~~~~--~~~i~~~d~~~~ 326 (515)
.+|+.+.. .+.|...++...
T Consensus 235 ~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 235 SLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TEEEEEECSSSCEEEEEETTSC
T ss_pred CEEEEEECCCCcEEEEEECCCC
Confidence 88876533 356666666443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.73 E-value=0.14 Score=50.70 Aligned_cols=197 Identities=15% Similarity=0.111 Sum_probs=103.9
Q ss_pred cCCCEEEEEecC----ceEEEEECCCCceeEEe-e------ccCccCeEEEEeCCCCcEEEEEecC------CcEEEEeC
Q psy17610 91 PVNNKVFVGTVN----CEIFLIDMNSGFTLTLV-N------TCHTSAIYDLQFPVNFSSVFATCSK------NDIRIWSV 153 (515)
Q Consensus 91 ~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~-~------~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~ 153 (515)
.++..++.|+.+ ..+.+||..++.-.... . ......-..+.+..++..++.++.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467777777753 46889998875322221 0 1111112223332266666666643 34788888
Q ss_pred CCCceeEE--EEecCeEEEEEEEeeCCCEEEEEeCCC--eEEEEecCCCceEEEecC----CCCCCeEEEEEcCC-CCEE
Q psy17610 154 RTLNELLR--ISVMNMICACIVFTYDGKAILSGWNDG--FIRCFTPQSGKLKFIIPN----AHNRGVTALAITQD-GTRL 224 (515)
Q Consensus 154 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l 224 (515)
.+.+-... +...... .+++...++..++.|+.++ .+.+||+.+.+....-.. .......++.+..+ ++.+
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 77432111 1111111 1222223778888877654 689999988775543210 01122233555554 6677
Q ss_pred EEecC--C-----CcEEEEEccCCc------eeeEEeeccccCceEEEEEecCCCEEEEEeC--------CCcEEEEEcc
Q psy17610 225 LSGGG--E-----GQVRIWKLTRES------QSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--------DGTCVLWDLI 283 (515)
Q Consensus 225 ~~~~~--d-----~~i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~ 283 (515)
+.|+. + ..+..||+.... .............-..+....+++.++.|+. ...+.+||+.
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77765 2 358899987665 3333221111111123333344677777774 3468999998
Q ss_pred cceEE
Q psy17610 284 KSTRL 288 (515)
Q Consensus 284 ~~~~~ 288 (515)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 77654
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.64 E-value=0.43 Score=44.35 Aligned_cols=105 Identities=13% Similarity=0.037 Sum_probs=60.9
Q ss_pred CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc------ccCceEEEEEecC---CCEEEEEeC-------
Q psy17610 210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE------HTSSVSVIQIKSD---SKEAMSAST------- 273 (515)
Q Consensus 210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------- 273 (515)
.....|+|.|+|+++++-...+.|++++...........+.. .......++++|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999977765444568888754333332322221 2355678999995 555554432
Q ss_pred ------CCcEEEEEcccc-------eEEEE-EEc--CccEEEEEEcCCCcEEEEEEC
Q psy17610 274 ------DGTCVLWDLIKS-------TRLII-MIL--PSMIMSAAYHPSEVQLITCST 314 (515)
Q Consensus 274 ------d~~i~iwd~~~~-------~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~ 314 (515)
...|.-++.... +.+.. +.. ......++|.|++.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124555554321 11111 111 134788999999987776543
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.92 E-value=2.4 Score=39.40 Aligned_cols=228 Identities=10% Similarity=0.092 Sum_probs=114.7
Q ss_pred CcEEEEEEecCCC-EEEEEecCceEEEEECCCCc---eeEEe----ec----cCccCeEEEEeCCC---CcEEEEE-ec-
Q psy17610 82 SGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGF---TLTLV----NT----CHTSAIYDLQFPVN---FSSVFAT-CS- 144 (515)
Q Consensus 82 ~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~---~~~~~----~~----~h~~~v~~~~~~~~---~~~l~~~-~~- 144 (515)
.....|+|.|+|. .|+++...|.|++++.+... .+..+ .. +.......|+|+|+ ..+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 5567999999996 56667788999999754321 11111 11 12456889999996 2244333 22
Q ss_pred -C----------CcEEEEeCCC----------CceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCC--------------
Q psy17610 145 -K----------NDIRIWSVRT----------LNELLRISV--MNMICACIVFTYDGKAILSGWND-------------- 187 (515)
Q Consensus 145 -d----------~~i~iw~~~~----------~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-------------- 187 (515)
+ ..|.-|.+.. .+.+..+.. ....-..++|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 1344465542 122333321 11235789999999877665543
Q ss_pred ---CeEEEEecCCC---------------------ceEEEecCCCCCCeEEEEEcCC-----CC-EEEEecCCC----cE
Q psy17610 188 ---GFIRCFTPQSG---------------------KLKFIIPNAHNRGVTALAITQD-----GT-RLLSGGGEG----QV 233 (515)
Q Consensus 188 ---g~i~~~~~~~~---------------------~~~~~~~~~~~~~v~~~~~~~~-----~~-~l~~~~~d~----~i 233 (515)
|.|.-.+.+.. ..+.. .+|.. ...++|+|. |+ ++..+...| .-
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a--~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ 250 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA--HGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSA 250 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE--ECCSS-CCBEEEESSCSSTTCSEEEEEECC------CE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE--ECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCC
Confidence 33444444431 01222 24444 357899986 33 344332212 12
Q ss_pred EEEEccCCc----eeeEEeecccc-CceEEEEEecC-------CCEEEEEeCCCcEEEEEcccce---EEEEE--E----
Q psy17610 234 RIWKLTRES----QSLQCVLKEHT-SSVSVIQIKSD-------SKEAMSASTDGTCVLWDLIKST---RLIIM--I---- 292 (515)
Q Consensus 234 ~iw~~~~~~----~~~~~~~~~~~-~~v~~~~~~~~-------~~~l~~~~~d~~i~iwd~~~~~---~~~~~--~---- 292 (515)
.|..+.... ..++..+..|. ..+..+.|-.. +. ++.+...+.|....+.... ....+ .
T Consensus 251 ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~-~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~ 329 (463)
T 2wg3_C 251 RILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGS-YVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGS 329 (463)
T ss_dssp EEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTC-EEEEETTSCEEEEEC-----CCEEEEECEEETTS
T ss_pred eEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcce-EEEecCCCcEEEEEeCCCCceeeEEEeecCCccc
Confidence 333332111 12233333221 46677777432 23 4445555666655554321 11111 1
Q ss_pred ----cCccEEEEEEcCCCcEEEEEE
Q psy17610 293 ----LPSMIMSAAYHPSEVQLITCS 313 (515)
Q Consensus 293 ----~~~~~~~~~~~~~~~~l~~~~ 313 (515)
....+..+...|+|.++++..
T Consensus 330 ~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 330 CRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccccCcceEEEECCCCCEEEEec
Confidence 124688888899988777765
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.70 E-value=2.7 Score=39.03 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=61.6
Q ss_pred EEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCc---eEEEecC--------CCCCCeEEEEEcCC----CCEEEEecC--
Q psy17610 168 ICACIVFTYDGK-AILSGWNDGFIRCFTPQSGK---LKFIIPN--------AHNRGVTALAITQD----GTRLLSGGG-- 229 (515)
Q Consensus 168 ~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~---~~~~~~~--------~~~~~v~~~~~~~~----~~~l~~~~~-- 229 (515)
....|+|.|+|. .|+++...|.|++++..... .+..+.. ........|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999996 56677789999999754321 2222211 11456889999996 433333221
Q ss_pred C----------CcEEEEEccCC--------ceeeEEeec--cccCceEEEEEecCCCEEEEEeCCC
Q psy17610 230 E----------GQVRIWKLTRE--------SQSLQCVLK--EHTSSVSVIQIKSDSKEAMSASTDG 275 (515)
Q Consensus 230 d----------~~i~iw~~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~ 275 (515)
+ ..|.-|.+... ..+.+..+. ........|.|.|||.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444555321 112222222 1122357899999998877766543
No 351
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=93.61 E-value=3.4 Score=36.02 Aligned_cols=197 Identities=10% Similarity=0.026 Sum_probs=109.9
Q ss_pred cCCCEEEEEeCCCcEEEEEcccceEE-------E--EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE---
Q psy17610 263 SDSKEAMSASTDGTCVLWDLIKSTRL-------I--IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--- 330 (515)
Q Consensus 263 ~~~~~l~~~~~d~~i~iwd~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~--- 330 (515)
++...+++.+.+|.|+--.+...+.. . .+.....+..+........++..+..|.++-+....-....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667888899999988876543221 1 11223345555555566677888888887776543211110
Q ss_pred -------EEecCCCccEEEEEEcC---CCCEEEEEcCCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcE
Q psy17610 331 -------SLEGSDVAAVNCVDFVD---DGKYFLTGGADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKV 393 (515)
Q Consensus 331 -------~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~ 393 (515)
.+.......+..+...+ +..+++..+..|.++...+.. |.....+.. .+.+..+....+...
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence 01111123444443322 456788889999999887743 223333433 455555555455567
Q ss_pred EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610 394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472 (515)
Q Consensus 394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 472 (515)
++..+.+|....+............ .............+..+..-+++..+++.+..|..+..++..
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~------------~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGT------------QGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTB------------CCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCC------------CCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 8888899999888775432110000 011111111233455555545566788889999998888753
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.77 E-value=5.5 Score=36.09 Aligned_cols=213 Identities=8% Similarity=-0.087 Sum_probs=99.1
Q ss_pred CEEEEEeCCCeEEEEecCC-CceEEEe-cCCCCCCeEEEEEcC--CCCEEEEecCCC----cEEEEEccCCceeeEEe--
Q psy17610 179 KAILSGWNDGFIRCFTPQS-GKLKFII-PNAHNRGVTALAITQ--DGTRLLSGGGEG----QVRIWKLTRESQSLQCV-- 248 (515)
Q Consensus 179 ~~l~~~~~dg~i~~~~~~~-~~~~~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~-- 248 (515)
..|.+++..| +.+++... ++.-... .......|.+|++.| .+. +.+++..| .|...+-...+......
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence 3677777777 55554432 2222111 112345699999998 444 44444444 34333211111221111
Q ss_pred -ecc--------ccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEE--------------------cCccE
Q psy17610 249 -LKE--------HTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMI--------------------LPSMI 297 (515)
Q Consensus 249 -~~~--------~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------------------~~~~~ 297 (515)
+.. ....|..+++.|. ...++.+...+.|...+-. ++.-..+. ....+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCce
Confidence 111 1124777888862 4566666655555544321 11111111 11247
Q ss_pred EEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecC-C-----------CccEEEEEEcCC-CCEEEEEcCCCeEEE
Q psy17610 298 MSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGS-D-----------VAAVNCVDFVDD-GKYFLTGGADQIVKM 363 (515)
Q Consensus 298 ~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~-----------~~~i~~~~~~~~-~~~l~~~~~dg~i~i 363 (515)
..+.++|. ...++++...+.+...+- .++.-..+... . ...+.++.+.|+ ...+.++...+ |..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~ 257 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYR 257 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEE
Confidence 78889884 445555555554544332 22222222110 0 124788999985 35666666544 443
Q ss_pred EEccCCeeeeeccC--CC---CCeeEEEECC-CCcEEEEE
Q psy17610 364 WMYREGVPCFVGIG--HA---ASITKIKISP-DKKVIVSV 397 (515)
Q Consensus 364 ~d~~~~~~~~~~~~--~~---~~i~~~~~~~-~~~~l~~~ 397 (515)
.+- .++....+.. .. ..+..++++| +...|..+
T Consensus 258 s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 258 MDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred eCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 332 2332222211 11 3456788886 33344444
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.40 E-value=9.2 Score=37.80 Aligned_cols=236 Identities=9% Similarity=0.014 Sum_probs=121.1
Q ss_pred eEEEE-eCCCCcEEEEEec-C----CcEEEEeCCCCceeEE-EE-ecCe------EEEEEEEeeCCCEEEEEe-------
Q psy17610 127 IYDLQ-FPVNFSSVFATCS-K----NDIRIWSVRTLNELLR-IS-VMNM------ICACIVFTYDGKAILSGW------- 185 (515)
Q Consensus 127 v~~~~-~~~~~~~l~~~~~-d----~~i~iw~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~------- 185 (515)
...+. ++|++++++.+-+ . ..++++|+.+++.+.. +. ..+. ....++|..+ +.++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCc
Confidence 44555 8999988777655 2 2599999999876531 11 0000 1134478744 4444432
Q ss_pred ----CCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCC-----EEEEecC---CCcEEEEEccCCceeeEEeecc
Q psy17610 186 ----NDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGT-----RLLSGGG---EGQVRIWKLTRESQSLQCVLKE 251 (515)
Q Consensus 186 ----~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~ 251 (515)
....++.|.+-+.. -...+.......-.....+++++ .+++.+. ...+.+.+.......... +..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK-INM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-CCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-eec
Confidence 12468888776542 12222122222233455566665 2444332 234555565432233222 211
Q ss_pred ccCceEEEEEecCCCEEEEE----------eCCCcEEEEEcccce-------EEEE-EEc--CccEEEEEEcCCCcEEEE
Q psy17610 252 HTSSVSVIQIKSDSKEAMSA----------STDGTCVLWDLIKST-------RLII-MIL--PSMIMSAAYHPSEVQLIT 311 (515)
Q Consensus 252 ~~~~v~~~~~~~~~~~l~~~----------~~d~~i~iwd~~~~~-------~~~~-~~~--~~~~~~~~~~~~~~~l~~ 311 (515)
.... .+....++.+++.. ...+.|...++.++. .... +.. ...+..+.+..+ ..+++
T Consensus 289 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 289 PSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp CTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred CCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 1111 12234455554432 246778999987642 1222 222 235777888765 45566
Q ss_pred EECCC--eEEEEeCCCCc-eEEE-EecCCCccEEEEEEcCCCCEE-EEEc---CCCeEEEEEcc
Q psy17610 312 CSTNK--MIDYWETCDGS-IIRS-LEGSDVAAVNCVDFVDDGKYF-LTGG---ADQIVKMWMYR 367 (515)
Q Consensus 312 ~~~~~--~i~~~d~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l-~~~~---~dg~i~i~d~~ 367 (515)
...++ .+.++++.+++ .... +..+..+.+.....++++..+ ++.+ .-+.+..+|+.
T Consensus 366 ~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66665 46777776664 2333 433322456666676766544 3333 23578888876
No 354
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.09 E-value=10 Score=37.54 Aligned_cols=233 Identities=11% Similarity=0.051 Sum_probs=121.8
Q ss_pred EeeCCCEEEEEeC-----CCeEEEEecCCCceEEEecCCCC-C------CeEEEEEcCCCCEEEEec-----------CC
Q psy17610 174 FTYDGKAILSGWN-----DGFIRCFTPQSGKLKFIIPNAHN-R------GVTALAITQDGTRLLSGG-----------GE 230 (515)
Q Consensus 174 ~~~~~~~l~~~~~-----dg~i~~~~~~~~~~~~~~~~~~~-~------~v~~~~~~~~~~~l~~~~-----------~d 230 (515)
++|++++++.+-. -..++++|+.+++.+..-..+.. . ....++|..+. .++.+. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcCcCCCC
Confidence 7888887775432 23799999999987632111000 0 11344776433 344332 22
Q ss_pred CcEEEEEccCCceeeEEeeccccCce-EEEEEecCCCE-----EEEEeCC---CcEEEEEcccc-eEEEEEEcCccEEEE
Q psy17610 231 GQVRIWKLTRESQSLQCVLKEHTSSV-SVIQIKSDSKE-----AMSASTD---GTCVLWDLIKS-TRLIIMILPSMIMSA 300 (515)
Q Consensus 231 ~~i~iw~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~d---~~i~iwd~~~~-~~~~~~~~~~~~~~~ 300 (515)
..|+.|.+-+....-...+.+....+ .....++++++ +++.+.+ ..+.+.+.... .....+..+.... +
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 294 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT-L 294 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE-E
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce-E
Confidence 46888888544333344444433333 23444566652 4443322 34555565431 1223333333322 2
Q ss_pred EEcCCCcEEEEE----------ECCCeEEEEeCCCCc-------eEEE-EecCCCccEEEEEEcCCCCEEEEEcCCCe--
Q psy17610 301 AYHPSEVQLITC----------STNKMIDYWETCDGS-------IIRS-LEGSDVAAVNCVDFVDDGKYFLTGGADQI-- 360 (515)
Q Consensus 301 ~~~~~~~~l~~~----------~~~~~i~~~d~~~~~-------~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-- 360 (515)
..+.++..++.. ...+.|...++.++. .... +.......+..+.+..+ .++++...++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~ 373 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAK 373 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEE
Confidence 234455554422 246778888887642 2233 33333467788888876 56777777764
Q ss_pred EEEEEccCCe-eeee-cc-CCCCCeeEEEECCCCc-EEEEEeC---CCcEEEEeCC
Q psy17610 361 VKMWMYREGV-PCFV-GI-GHAASITKIKISPDKK-VIVSVSA---DGGIFLWTFP 409 (515)
Q Consensus 361 i~i~d~~~~~-~~~~-~~-~~~~~i~~~~~~~~~~-~l~~~~~---dg~i~iw~~~ 409 (515)
+.++++.++. .... +. ...+.+.....++++. ++++.+. -+.+..+|+.
T Consensus 374 l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 374 VVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6677776664 2222 21 1134566667777665 4444433 3567777765
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.84 E-value=7.2 Score=35.31 Aligned_cols=288 Identities=9% Similarity=-0.028 Sum_probs=132.7
Q ss_pred CCEEEEEecCceEEEEECCC-CceeEEe-eccCccCeEEEEeCC-CCcEEEEEecCC----cEEEEeCCCCceeEEEEe-
Q psy17610 93 NNKVFVGTVNCEIFLIDMNS-GFTLTLV-NTCHTSAIYDLQFPV-NFSSVFATCSKN----DIRIWSVRTLNELLRISV- 164 (515)
Q Consensus 93 ~~~l~~~~~d~~i~iw~~~~-~~~~~~~-~~~h~~~v~~~~~~~-~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~- 164 (515)
...|.+|+..| +.+++... +...... .......|.+|++.| +...+.+++..+ .|... .+.++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence 34677888777 55555432 2222221 111235699999998 234555555544 33332 222322222110
Q ss_pred -------------cCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceEEEecC------------------CCCCC
Q psy17610 165 -------------MNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLKFIIPN------------------AHNRG 211 (515)
Q Consensus 165 -------------~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------------------~~~~~ 211 (515)
....|.++++.|. ...+.++...+.|...+- .++.-..+.. .....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1125778888872 455666666665555432 2322222210 12235
Q ss_pred eEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeecc----c--------cCceEEEEEecC-CCEEEEEeCCCcE
Q psy17610 212 VTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----H--------TSSVSVIQIKSD-SKEAMSASTDGTC 277 (515)
Q Consensus 212 v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~--------~~~v~~~~~~~~-~~~l~~~~~d~~i 277 (515)
+.+|.++| +...+..+..++.|...+- ........... + ...+..+.+.|+ ...++.+...+ |
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~D--gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l 255 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFESTD--AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I 255 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEESS--TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEECC--CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence 78999987 3344555544444433322 22222111110 0 124788888885 35666666544 4
Q ss_pred EEEEcccceEEEEEE--cC----ccEEEEEEcCC-CcEEEEEEC-----------CCeEEEEeCCC-CceEEEEec--CC
Q psy17610 278 VLWDLIKSTRLIIMI--LP----SMIMSAAYHPS-EVQLITCST-----------NKMIDYWETCD-GSIIRSLEG--SD 336 (515)
Q Consensus 278 ~iwd~~~~~~~~~~~--~~----~~~~~~~~~~~-~~~l~~~~~-----------~~~i~~~d~~~-~~~~~~~~~--~~ 336 (515)
...+- .++.-..+. .+ ..+..++++|. ...+.++.. ++...+|.... ++.-..+.. +.
T Consensus 256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 43331 122222211 12 23466777763 344444432 22234454443 333333321 11
Q ss_pred Cc-----cEEEEEEcCC-CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610 337 VA-----AVNCVDFVDD-GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS 388 (515)
Q Consensus 337 ~~-----~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 388 (515)
.. ....++++|. ...|++++.++.|..- ...++.-..+..+-..+.+++|.
T Consensus 335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred ccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence 00 0135778774 3446666655555432 22333333333344456676663
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.52 E-value=6 Score=33.82 Aligned_cols=245 Identities=14% Similarity=0.070 Sum_probs=120.9
Q ss_pred CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610 209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL 288 (515)
Q Consensus 209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 288 (515)
...|..++..... .++. . ||.+..|-.......-. .......|..++.... +.+... ||.|..|-....-.+
T Consensus 23 ~~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~--p~~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 23 QSGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTM--PAATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SSSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSC--CGGGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTSTT
T ss_pred cCCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCC--CccCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCCCC
Confidence 3467777765432 2333 4 89999997643221111 1112335666665433 222234 899999875432111
Q ss_pred E-EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610 289 I-IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367 (515)
Q Consensus 289 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 367 (515)
- .......+..++.... +.++-. +|.++.|-....-.+. ........+..++...+- .+.-. ||.++.|-..
T Consensus 95 g~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDN 167 (282)
T ss_dssp CCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECC
T ss_pred CCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCC
Confidence 0 0011234555554433 333344 8889988654422111 111112456666554432 22233 6889888765
Q ss_pred CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610 368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 447 (515)
....+.....-...|..++...+.. ++. .||.+..|-............ ....|..+
T Consensus 168 ~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~--------------------~~~~v~~i 224 (282)
T 3qhy_B 168 YFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTE--------------------ALSGVSAI 224 (282)
T ss_dssp TTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGG--------------------GGSSCCEE
T ss_pred CCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcc--------------------cCCCceEE
Confidence 4322221112235678887765543 333 599999997554322110000 01225555
Q ss_pred eeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEE
Q psy17610 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 499 (515)
Q Consensus 448 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 499 (515)
+..... .++. . ||.|+.|-.....++.. ...|.+++-.+.-...
T Consensus 225 ~~G~~h-~~al-~-~g~v~~wG~n~~gq~~v-----~~~v~~iaaG~~h~~a 268 (282)
T 3qhy_B 225 ASGEWY-SLAL-K-NGKVIAWGSSRTAPSSV-----QSGVSSIEAGPNAAYA 268 (282)
T ss_dssp EECSSC-EEEE-E-TTEEEEESTTCCCCGGG-----SSCEEEEEECSSCEEE
T ss_pred EcCCCE-EEEE-E-CCEEEEecCCCCccccC-----CCCcEEEEECcCeEEE
Confidence 554333 2333 3 99999997655433222 1456666665544433
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.72 E-value=7.3 Score=33.32 Aligned_cols=217 Identities=12% Similarity=0.029 Sum_probs=105.6
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE-EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe
Q psy17610 255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII-MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE 333 (515)
Q Consensus 255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~ 333 (515)
.|..++.... +.+... ||.+..|-....-.+-. ......+..++.......+ . . +|.++.|-....-.+.. +
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~-l-~-~G~v~~wG~n~~Gqlg~-P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLA-L-K-DGEVIAWGGNEDGQTTV-P 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEE-E-E-TTEEEEEECCTTSTTCC-C
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEE-E-E-CCEEEEeeCCCCCCCCC-C
Confidence 5666665432 333334 88888886543211100 0112245555544332222 2 4 88888887544221110 1
Q ss_pred cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610 334 GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED 413 (515)
Q Consensus 334 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 413 (515)
..-...|..++...+ ..++-. +|.|+.|-....-.+.........|..++...+...+ -. ||.+..|-......
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCC
Confidence 111135666666543 333344 8999999765432222222234567777775544333 33 79999997654322
Q ss_pred ccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEc
Q psy17610 414 DVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFV 493 (515)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s 493 (515)
... +. .....|..++...+. .++. .+|.|+.|-....-.+..-. .....|..++-.
T Consensus 172 lg~-p~-------------------~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G 227 (282)
T 3qhy_B 172 TTV-PA-------------------EAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT-EALSGVSAIASG 227 (282)
T ss_dssp TSC-CG-------------------GGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG-GGGSSCCEEEEC
T ss_pred CCC-ce-------------------ecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc-ccCCCceEEEcC
Confidence 110 00 001336666554433 3333 59999999765422211111 111456666654
Q ss_pred CCCcEEEEeecCCeEEEE
Q psy17610 494 DDGKYFLTGGADQIVKIC 511 (515)
Q Consensus 494 ~~~~~l~s~~~dg~v~iw 511 (515)
......++ ||.|..|
T Consensus 228 ~~h~~al~---~g~v~~w 242 (282)
T 3qhy_B 228 EWYSLALK---NGKVIAW 242 (282)
T ss_dssp SSCEEEEE---TTEEEEE
T ss_pred CCEEEEEE---CCEEEEe
Confidence 44333222 7777766
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.68 E-value=8.2 Score=33.82 Aligned_cols=231 Identities=12% Similarity=0.058 Sum_probs=127.2
Q ss_pred CEEEEEeCCCeEEEEecCC-------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc---cCC----cee
Q psy17610 179 KAILSGWNDGFIRCFTPQS-------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL---TRE----SQS 244 (515)
Q Consensus 179 ~~l~~~~~dg~i~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~~~----~~~ 244 (515)
..+++.+.+|.|+--.+.+ ++-...........+..+........|+.-+..|.++-... ... .+.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 4677788888888665332 11112221223444555555445556666666676665543 211 111
Q ss_pred eEE---eeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceEE-------EEEEcCccEEEEEEcCCCcEEEE
Q psy17610 245 LQC---VLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTRL-------IIMILPSMIMSAAYHPSEVQLIT 311 (515)
Q Consensus 245 ~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~ 311 (515)
++. .+. ....|..+..-+ +..+++..+.+|.++.-.+...... ..+.....+..+........++.
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 111 111 234455554433 4778999999999999887653221 12223345555555556678888
Q ss_pred EECCCeEEEEeCC--CCce-------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-------e--e
Q psy17610 312 CSTNKMIDYWETC--DGSI-------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP-------C--F 373 (515)
Q Consensus 312 ~~~~~~i~~~d~~--~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~--~ 373 (515)
.+..|.+..+... .-.. ..-+.......|..+...+++..++..+..|.++.-.+..-.. + .
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~ 242 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTV 242 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESS
T ss_pred EECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEE
Confidence 8899998888766 2111 1112222235566666666667888999999998887643211 1 1
Q ss_pred eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 374 VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 374 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
.+..-.+.+-.+....+...++..+.+|.+.-++...
T Consensus 243 ~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 243 MYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 2222133444444434445566677788877776543
No 359
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=90.53 E-value=8.1 Score=33.52 Aligned_cols=195 Identities=11% Similarity=0.075 Sum_probs=105.0
Q ss_pred CCCEEEEEeCCCcEEEEEcccceEEE---------EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC---CC------
Q psy17610 264 DSKEAMSASTDGTCVLWDLIKSTRLI---------IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET---CD------ 325 (515)
Q Consensus 264 ~~~~l~~~~~d~~i~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~---~~------ 325 (515)
+...+++.+.+|.|+--.+...+... .+.....+..+........++..+..|.++-+.. +.
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 45567888888888877665432211 1122334545555555667777778887666543 22
Q ss_pred CceEEE-EecCCCccEEEEEE-c--CCCCEEEEEcCCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610 326 GSIIRS-LEGSDVAAVNCVDF-V--DDGKYFLTGGADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKVI 394 (515)
Q Consensus 326 ~~~~~~-~~~~~~~~i~~~~~-~--~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l 394 (515)
|.++.. +.......|..+.. . +++.+++..+.+|.++-..+.. +.....+..+ +.+-.+....+...+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEV 160 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEE
T ss_pred CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEE
Confidence 221110 11122244555433 2 3456788899999999987642 2222233334 455555444455567
Q ss_pred EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610 395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 471 (515)
Q Consensus 395 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~ 471 (515)
+..+.+|.+..++............ ............|..+...+++..+++.+..|.++-.++.
T Consensus 161 ~l~T~~G~~irf~~~~v~~~gr~a~------------Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 161 MLFSAEGKVVRFKESSVRAMGCNTT------------GVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTCC------------CEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEECCCCcEEEEEHHHcCccCCCCC------------CeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 7788899888887654321110000 0011111123445566555556678888999998888764
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.37 E-value=6.1 Score=37.83 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=42.3
Q ss_pred CcEEEEEEecCCCEEEEEec------------CceEEEEECCCCceeEEeecc-CccCeEEEEeCCCCcEEEEEec
Q psy17610 82 SGISSLQYNPVNNKVFVGTV------------NCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPVNFSSVFATCS 144 (515)
Q Consensus 82 ~~v~~~~~s~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~ 144 (515)
...--|+|+|.|++++.-.. ++.+.+.+..+++ +..++.+ -...++.++|+||++.|++.-.
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 34567899999985554321 1346677777754 4444444 4468999999999998887654
No 361
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=89.35 E-value=11 Score=33.12 Aligned_cols=232 Identities=8% Similarity=-0.007 Sum_probs=122.0
Q ss_pred CEEEEEeCCCcEEEEEcccce-------EEEE--EEcCccEEEEEEcCCCcEEEEEECCCeEEEEe---CCCC------c
Q psy17610 266 KEAMSASTDGTCVLWDLIKST-------RLII--MILPSMIMSAAYHPSEVQLITCSTNKMIDYWE---TCDG------S 327 (515)
Q Consensus 266 ~~l~~~~~d~~i~iwd~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d---~~~~------~ 327 (515)
..+++.+.+|.|+--.+.+.+ -... +.....+..+........++.-+..|.++... ++.. .
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 456777788888766543211 1111 11223355555555566666677777766543 3322 2
Q ss_pred eEEE-EecCCCccEEEE-EEcC--CCCEEEEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610 328 IIRS-LEGSDVAAVNCV-DFVD--DGKYFLTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISPDKKVIVS 396 (515)
Q Consensus 328 ~~~~-~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~ 396 (515)
++.. +.......|..+ .+.+ +..+++..+.+|.++-..+... .....+.. .+.+..+........|+.
T Consensus 84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEE
T ss_pred EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEE
Confidence 2111 111122445444 4432 5789999999999999887542 22223333 344555555455567888
Q ss_pred EeCCCcEEEEeCC--CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe
Q psy17610 397 VSADGGIFLWTFP--ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 474 (515)
Q Consensus 397 ~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 474 (515)
.+..|.+..+... .......... ....+.......|.++...+++..++..+..|.++.-.+..-.
T Consensus 163 ~T~~G~~~rf~~~~~eip~~gr~a~------------Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 163 VSANGQSIRFSATDEALRPMGRATS------------GVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp EETTSEEEEEECCTTTSCCCCTTSB------------CEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred EECCCeEEEEECcccccCcCCcCCC------------CeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence 8899998888776 3221110000 0011111223446666666667789999999999887764322
Q ss_pred -------eeeeec--ccccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610 475 -------IIRSLE--GSDVAAVNCVDFVDDGKYFLTGGADQIVKIC 511 (515)
Q Consensus 475 -------~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw 511 (515)
-+..+. ... +.+..+....+...++..+.+|.+.-+
T Consensus 231 ~~~R~~~G~~~~~l~~~~-d~lv~~~~~~~~~~i~l~T~~G~~ir~ 275 (327)
T 3uc1_A 231 VQGRGGKGVLTVMYDRRR-GRLVGALIVDDDSELYAVTSGGGVIRT 275 (327)
T ss_dssp BCCTTSCCEESSCCCTTT-CSEEEEEEECTTCEEEEEEGGGCEEEE
T ss_pred ccCcCCCcEEEEEecCCC-CeEEEEEEeCCCccEEEEcCCCeEEEE
Confidence 122222 212 344444444444455556666655443
No 362
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=89.10 E-value=11 Score=32.79 Aligned_cols=234 Identities=11% Similarity=0.063 Sum_probs=123.6
Q ss_pred eCCCEEEEEeCCCeEEEEecCCCceEE-------EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC---C----
Q psy17610 176 YDGKAILSGWNDGFIRCFTPQSGKLKF-------IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR---E---- 241 (515)
Q Consensus 176 ~~~~~l~~~~~dg~i~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---~---- 241 (515)
|+...+++.+.+|.|+--.+..-+... .+.......+..+........|+..+..|.+.-+.... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 345678888999999877665422211 11011233444444444455667677778766665421 1
Q ss_pred ceeeEE---eeccccCceEEEEEe---cCCCEEEEEeCCCcEEEEEcccce-------EEEEEEcCccEEEEEEcCCCcE
Q psy17610 242 SQSLQC---VLKEHTSSVSVIQIK---SDSKEAMSASTDGTCVLWDLIKST-------RLIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 242 ~~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 308 (515)
.+.+.. .+. ....|..+... .++.+++..+..|.++-..+.... ....+.....+..+........
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 111111 111 23345555432 345678999999999998775321 1111222345555555555667
Q ss_pred EEEEECCCeEEEEeCCCCc-------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC---------eee
Q psy17610 309 LITCSTNKMIDYWETCDGS-------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG---------VPC 372 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~ 372 (515)
++..+.+|.+..++...-. -+.-+.......+..+...+++..+++.+..|..+-.++..- ...
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~ 239 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVIS 239 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEES
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEe
Confidence 8888888888777653211 112222223355666655555667888888999888876431 112
Q ss_pred eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610 373 FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 373 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 410 (515)
..+....+.+-.+....+...++..+.+|.+.-.++..
T Consensus 240 ~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 240 IKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred eEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 22222234454444433344455666777766665543
No 363
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=86.77 E-value=15 Score=32.02 Aligned_cols=197 Identities=11% Similarity=0.064 Sum_probs=106.8
Q ss_pred cCCCEEEEEeCCCcEEEEEcccceE----EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC---CC------CceE
Q psy17610 263 SDSKEAMSASTDGTCVLWDLIKSTR----LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET---CD------GSII 329 (515)
Q Consensus 263 ~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~---~~------~~~~ 329 (515)
|+...+++.+.+|.|+--.+...+. ...+.....+..+........++..+..|.++-+.. +. |.++
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence 4556788888888888776542211 111222334555555556667777778887666543 22 2211
Q ss_pred EE-EecCCCccEEEE-EEcC--CCCEEEEEcCCCeEEEEEccC--------CeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610 330 RS-LEGSDVAAVNCV-DFVD--DGKYFLTGGADQIVKMWMYRE--------GVPCFVGIGHAASITKIKISPDKKVIVSV 397 (515)
Q Consensus 330 ~~-~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 397 (515)
.. +.......|..+ ...+ ++.+++..+.+|.++-..+.. +.....+... +.+-.+........++..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Confidence 11 111122345443 3432 256788899999999987742 2222223322 455555554455567788
Q ss_pred eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEeecCCeEEEEecCC
Q psy17610 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCD 472 (515)
Q Consensus 398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~ 472 (515)
+.+|.+..++........... .............|..+..-+++. .+++.+..|..+..++..
T Consensus 162 T~~G~~irf~~~ev~~~gR~a------------~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRA------------AGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSC------------CCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHCcccCCCC------------cCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 899998888765432110000 011111111223455554434444 788888899888777654
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=86.42 E-value=18 Score=32.41 Aligned_cols=174 Identities=9% Similarity=0.022 Sum_probs=99.5
Q ss_pred CeEEEEeCCCC--ceEEEEecCC-----CccEEEEEEc---CC----CCEEEEE-cCCCeEEEEEccCCeeeeecc----
Q psy17610 316 KMIDYWETCDG--SIIRSLEGSD-----VAAVNCVDFV---DD----GKYFLTG-GADQIVKMWMYREGVPCFVGI---- 376 (515)
Q Consensus 316 ~~i~~~d~~~~--~~~~~~~~~~-----~~~i~~~~~~---~~----~~~l~~~-~~dg~i~i~d~~~~~~~~~~~---- 376 (515)
-+|.+||+.+. +.++++..+. ...+..+.+. |+ +.++... ...+-|.++|+.+++..+.+.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36888999999 8888887542 2457778877 22 3343333 346789999998876544331
Q ss_pred C----------C----CCCeeEEEECCC----CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeee
Q psy17610 377 G----------H----AASITKIKISPD----KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM 438 (515)
Q Consensus 377 ~----------~----~~~i~~~~~~~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (515)
. . ...+..|+++|+ ++.|.-....+ -++|.+++....... .. ......
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~---~~----------~~v~~~ 268 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKG---GK----------LNPELL 268 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTT---CC----------CCCEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcc---hh----------hceEEe
Confidence 1 0 136778888887 67777665554 245554432110000 00 000111
Q ss_pred cC---cccEEEeeec-cCCcEEEEeecCCeEEEEecCC-----CeeeeeecccccceEEEEEEcCCCcEEEEee
Q psy17610 439 IL---PSMIMSAAYH-PSEVQLITCSTNKMIDYWETCD-----GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 503 (515)
Q Consensus 439 ~~---~~~i~~~~~s-~~~~~l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 503 (515)
+. .+.-..+++. .+|.++++--....|..|+..+ +............-+..+.+.++|.+.+..+
T Consensus 269 G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 269 GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 11 1223455665 5777777777888999999865 1111122222224567788888887655543
No 365
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=86.42 E-value=18 Score=32.56 Aligned_cols=246 Identities=13% Similarity=0.155 Sum_probs=121.1
Q ss_pred CeEEEEEcCCCCEEEEecCCCcEEEEEccCCc---------eeeEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610 211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRES---------QSLQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLW 280 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 280 (515)
.+..++.. ....+.-..||.|..|-..... ......+.. ....+..++++....+.+....||.|..|
T Consensus 54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 34445433 3455556678889888653211 011111111 22334556666667777888889999999
Q ss_pred Ecccc-----------eEEEEEEc-C-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC---------c--eEEEEecCC
Q psy17610 281 DLIKS-----------TRLIIMIL-P-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---------S--IIRSLEGSD 336 (515)
Q Consensus 281 d~~~~-----------~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~---------~--~~~~~~~~~ 336 (515)
-.... .....+.. . ..+..++. ...+.++...+|.++.|-.... . ....+....
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~ 209 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 209 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGT
T ss_pred eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccC
Confidence 54321 11111111 1 13444443 3445566677888998864321 1 111122222
Q ss_pred CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC------------eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610 337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG------------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF 404 (515)
Q Consensus 337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 404 (515)
...+..++........++-..+|.|+.|-.... .+..........|..++.... +.+....+|.|.
T Consensus 210 ~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt~~G~v~ 287 (389)
T 3kci_A 210 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALTKSGAVY 287 (389)
T ss_dssp TSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEETTSCEE
T ss_pred CCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEeCCCeEE
Confidence 245666665443345666677899999965321 111111111224666665433 444556899999
Q ss_pred EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610 405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472 (515)
Q Consensus 405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 472 (515)
.|-................ ....+.......|..++.. ..+.++...+|.|+.|-...
T Consensus 288 ~wG~n~~GqLG~g~~~~~~--------~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 288 TWGKGDYHRLGHGSDDHVR--------RPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEECCGGGTTCSSSCCCEE--------EEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred EEeCCCCCCCCCCCCcccc--------CCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCC
Confidence 9975432211110000000 0000001112235555443 33445557899999997643
No 366
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=86.38 E-value=18 Score=32.34 Aligned_cols=148 Identities=10% Similarity=0.029 Sum_probs=87.7
Q ss_pred ecCCCEEEEEeCCCcEEEEEcccc---------eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEe---CCC----
Q psy17610 262 KSDSKEAMSASTDGTCVLWDLIKS---------TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE---TCD---- 325 (515)
Q Consensus 262 ~~~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d---~~~---- 325 (515)
-|+...+++.+.+|.|+--.+... .....+.....+..+........++..+..|.++.+. ++.
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 367788999999999998765331 2222333344566666666667788788888877664 322
Q ss_pred --CceEEE-EecCCCccEEEEE-Ec--CCCCEEEEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECCCCc
Q psy17610 326 --GSIIRS-LEGSDVAAVNCVD-FV--DDGKYFLTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISPDKK 392 (515)
Q Consensus 326 --~~~~~~-~~~~~~~~i~~~~-~~--~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~ 392 (515)
|.++.. +.......|..+. +. .++.+|+..+..|.++...+... .....+.. ...+-.+.......
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 222111 1112224454443 32 24568999999999998876432 22223333 34454454444555
Q ss_pred EEEEEeCCCcEEEEeCCC
Q psy17610 393 VIVSVSADGGIFLWTFPE 410 (515)
Q Consensus 393 ~l~~~~~dg~i~iw~~~~ 410 (515)
.++..+.+|.+..++...
T Consensus 163 ~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGEST 180 (370)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred eEEEEeCCCeEEEEEccc
Confidence 677788899888887654
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=85.97 E-value=17 Score=31.63 Aligned_cols=192 Identities=11% Similarity=0.040 Sum_probs=110.5
Q ss_pred eCCCEEEEEeCCCeEEEEecCCCc-------eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc------
Q psy17610 176 YDGKAILSGWNDGFIRCFTPQSGK-------LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES------ 242 (515)
Q Consensus 176 ~~~~~l~~~~~dg~i~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------ 242 (515)
++..++++.+.+|.|+--.+..-+ -...+.......+..+........++..+..|.++-+....-.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 566778899999999887654321 1211111233445555555555677777888887777653110
Q ss_pred -eee---EEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceE-------EEEEEcCccEEEEEEcCCCcE
Q psy17610 243 -QSL---QCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTR-------LIIMILPSMIMSAAYHPSEVQ 308 (515)
Q Consensus 243 -~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 308 (515)
+.. ...+. ....|..+...+ +..+++..+..|.++...+..... ...+.....+..+.....+..
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence 000 00111 123454443333 467788999999999888754322 111222345555555555667
Q ss_pred EEEEECCCeEEEEeCCCC-------ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 309 LITCSTNKMIDYWETCDG-------SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 309 l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
++..+.+|....+....- +=+..+.......+..+..-+++..+++.+..|..+..++..
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 888889999888876431 112222222234555655555566788888899999888753
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.19 E-value=3.3 Score=39.65 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=46.3
Q ss_pred EEEeeeccCCcEEEEeecC------------CeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610 444 IMSAAYHPSEVQLITCSTN------------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 502 (515)
Q Consensus 444 i~~~~~s~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 502 (515)
.-.|+|+|.|++++.-+.+ ..+.+.+..++++.+-+.++....++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5678999999976665432 2466777778888877877777899999999999988764
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=84.88 E-value=22 Score=32.06 Aligned_cols=235 Identities=11% Similarity=0.037 Sum_probs=116.2
Q ss_pred CCCEEEEEeCCCcEEEEEcccc--------e---EEEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC----
Q psy17610 264 DSKEAMSASTDGTCVLWDLIKS--------T---RLIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---- 326 (515)
Q Consensus 264 ~~~~l~~~~~d~~i~iwd~~~~--------~---~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~---- 326 (515)
.....+....||.|..|-.... . ....+.. ...+..++++....+.++-..+|.++.|-....
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 3456666778899999854321 1 1111111 123555667777777778888999999954321
Q ss_pred -------ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC------------eeeeeccCCCCCeeEEEE
Q psy17610 327 -------SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG------------VPCFVGIGHAASITKIKI 387 (515)
Q Consensus 327 -------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~ 387 (515)
.....+.......|..++.. ....++-..+|.|+.|-.... .+..........|..++.
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 11111222121245555544 345555667889999965321 111111112345777776
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEE
Q psy17610 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 467 (515)
Q Consensus 388 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i 467 (515)
.....+.+....||.|..|-................. ...+.......|..++.. ..+.++-..+|.|+.
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~--------p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~ 288 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------PMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYT 288 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEE--------EEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccc--------cEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEE
Confidence 5534566667789999999754322111100000000 000000111235555443 334444567899999
Q ss_pred EecCCC-e----------eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610 468 WETCDG-S----------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL 512 (515)
Q Consensus 468 wd~~~~-~----------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 512 (515)
|-.... + ....+.......|..++-.. ...+....||.|..|=
T Consensus 289 wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG 342 (389)
T 3kci_A 289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWG 342 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEEE
T ss_pred EeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEee
Confidence 965321 0 11112211113455555432 3344456778777773
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.54 E-value=5.5 Score=37.67 Aligned_cols=60 Identities=18% Similarity=0.194 Sum_probs=45.3
Q ss_pred cEEEeeeccCCcEEEEeec------------CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610 443 MIMSAAYHPSEVQLITCST------------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG 502 (515)
Q Consensus 443 ~i~~~~~s~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 502 (515)
....+.|.++|.+.+..+. ...|+.++..++++...+.+.....++.++|+||++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 3678999999987774332 12577788878887777765544789999999999988775
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=81.71 E-value=23 Score=30.02 Aligned_cols=189 Identities=12% Similarity=0.038 Sum_probs=101.8
Q ss_pred CCcEEEEEECCCeEEEE---eCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC------eeeee
Q psy17610 305 SEVQLITCSTNKMIDYW---ETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG------VPCFV 374 (515)
Q Consensus 305 ~~~~l~~~~~~~~i~~~---d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~ 374 (515)
....++..+..|.++.. ++...+... + ......|..+.... +..+++..+.+|.++-..+..- .....
T Consensus 34 t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~ 111 (276)
T 3no0_A 34 FTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIK 111 (276)
T ss_dssp TTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSC
T ss_pred CCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEe
Confidence 34445555566665543 222221111 2 22235555554322 4678999999999999887553 22222
Q ss_pred ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610 375 GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV 454 (515)
Q Consensus 375 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 454 (515)
+.. .+.+..+........++..+..|.+..++............. ...........|..+...+++.
T Consensus 112 lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~G------------v~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 112 LTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARG------------VQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp CCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCC------------EECCCCCTTCCEEEEEEESSCS
T ss_pred cCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCC------------EEEEccCCCCEEEEEEEeCCCC
Confidence 332 345666666556667888889999888876543211100000 0011111224466665556677
Q ss_pred EEEEeecCCeEEEEecCC-------CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610 455 QLITCSTNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 455 ~l~~~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i 510 (515)
.++..+..|.++...+.. ++-+..+. . .+.+..+....+...++..+.+|.+..
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~-~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-T-KDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-S-SSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-C-CCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 888999999998887643 22233332 2 244555444334445666677776554
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=79.73 E-value=27 Score=29.59 Aligned_cols=195 Identities=12% Similarity=0.068 Sum_probs=110.3
Q ss_pred CeEEEEEcCCCCEEEEecCCCcEEEE---EccCCceeeEEeeccccCceEEEEEec--CCCEEEEEeCCCcEEEEEcccc
Q psy17610 211 GVTALAITQDGTRLLSGGGEGQVRIW---KLTRESQSLQCVLKEHTSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKS 285 (515)
Q Consensus 211 ~v~~~~~~~~~~~l~~~~~d~~i~iw---~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~ 285 (515)
.+..+.-......|+.-+.+|.++-- ++........ +. ....|..+.. + +...++..+.+|.++...+...
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l--l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL--KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC--SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc--CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 34444443334455555666765543 3321111111 22 3455665544 4 4678999999999999987653
Q ss_pred e------EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc-------eEEEEecCCCccEEEEEEcCCCCEE
Q psy17610 286 T------RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-------IIRSLEGSDVAAVNCVDFVDDGKYF 352 (515)
Q Consensus 286 ~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l 352 (515)
. ....+.....+..+........++..+..|.+..+....-. =+.-+.......+..+...+++..+
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYL 180 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEE
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEE
Confidence 2 11222333456666666667788888999998887643211 1111222222556565555556788
Q ss_pred EEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE--EeCCC
Q psy17610 353 LTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL--WTFPE 410 (515)
Q Consensus 353 ~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i--w~~~~ 410 (515)
+..+..|.++...+..- +-+..+ ...+.+..+....+...++..+.+|.+.. ++...
T Consensus 181 l~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 181 LVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 88899999988876432 122222 23344554443334456667778888777 76543
No 373
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.20 E-value=66 Score=33.17 Aligned_cols=38 Identities=11% Similarity=0.187 Sum_probs=33.4
Q ss_pred ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeee
Q psy17610 442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL 479 (515)
Q Consensus 442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 479 (515)
..+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45777888889999999999999999999999988764
No 374
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=72.23 E-value=49 Score=28.81 Aligned_cols=202 Identities=8% Similarity=0.028 Sum_probs=108.1
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEEEECCC---------CceeEEeec-cCccCeEEEE-eCC--CCcEEEEEecCCc
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS---------GFTLTLVNT-CHTSAIYDLQ-FPV--NFSSVFATCSKND 147 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~---------~~~~~~~~~-~h~~~v~~~~-~~~--~~~~l~~~~~d~~ 147 (515)
.+.+..+......+.|+..+..|.++-+.... |..+...+. .....|.++. ..+ ++.+++.++.+|.
T Consensus 38 ~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 38 TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 34455555555666777788888877665422 211111111 1233455543 332 2568999999999
Q ss_pred EEEEeCCCCce------e--EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC-------ceEEEecCCCCCCe
Q psy17610 148 IRIWSVRTLNE------L--LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG-------KLKFIIPNAHNRGV 212 (515)
Q Consensus 148 i~iw~~~~~~~------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~-------~~~~~~~~~~~~~v 212 (515)
++--.+..... + ..+.. .+.+..+......+.++..+.+|.+..+....- +-+..+.......|
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~V 196 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI 196 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred EEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEE
Confidence 99887752211 1 12222 244555555555667888899999888865421 11222222334556
Q ss_pred EEEEEcCCCC-EEEEecCCCcEEEEEccCCc-----eeeEEe---eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610 213 TALAITQDGT-RLLSGGGEGQVRIWKLTRES-----QSLQCV---LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283 (515)
Q Consensus 213 ~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~-----~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 283 (515)
.++...+++. .+++.+..|..+..++..-. ..-... ++.....+..+....++..++..+..|.+....+.
T Consensus 197 v~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 197 VSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred EEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 6665544444 78888888888887774210 011111 11122234433333334556666666766555543
No 375
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=71.86 E-value=55 Score=29.19 Aligned_cols=234 Identities=12% Similarity=0.061 Sum_probs=126.6
Q ss_pred eeCCCEEEEEeCCCeEEEEecCC-------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC---C---
Q psy17610 175 TYDGKAILSGWNDGFIRCFTPQS-------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR---E--- 241 (515)
Q Consensus 175 ~~~~~~l~~~~~dg~i~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---~--- 241 (515)
-|+...+++.+.+|.|+--.+.. ++-...+.......+..+........++..+..|.+.-+.... .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 46778899999999999764421 1111122123455666666666666677777778777665421 1
Q ss_pred -ceeeEE---eeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceE-------EEEEEcCccEEEEEEcCCCc
Q psy17610 242 -SQSLQC---VLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTR-------LIIMILPSMIMSAAYHPSEV 307 (515)
Q Consensus 242 -~~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 307 (515)
.+.... .+. ....|..+.... ++.+++.++..|.++...+..... ...+.....+..+.......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 111111 112 234555554432 456899999999999988654321 11122233455555555566
Q ss_pred EEEEEECCCeEEEEeCCCCce-------EEEEecCCCccEEEEEEcC---------------------------------
Q psy17610 308 QLITCSTNKMIDYWETCDGSI-------IRSLEGSDVAAVNCVDFVD--------------------------------- 347 (515)
Q Consensus 308 ~l~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~i~~~~~~~--------------------------------- 347 (515)
.++..+.+|.+..+....-.. ++-+.......+..+...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~ 242 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVAD 242 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccccc
Confidence 777888888877776432111 1112222223444443333
Q ss_pred --CCCEEEEEcCCCeEEEEEccCCe---------eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610 348 --DGKYFLTGGADQIVKMWMYREGV---------PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409 (515)
Q Consensus 348 --~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~ 409 (515)
++..+++.+..|..+...+..-. ....+....+.+..+.+..+...++..+..|.+.-..+.
T Consensus 243 ~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 243 NGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred ccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 44578888999998888775321 111222223445444333344455556677766655543
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.21 E-value=12 Score=39.65 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610 126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS 163 (515)
Q Consensus 126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 163 (515)
.+.+++..++..++++.|.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44555666777899999999999999999999887755
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.68 E-value=31 Score=32.72 Aligned_cols=61 Identities=18% Similarity=0.166 Sum_probs=45.7
Q ss_pred cEEEEEEcCCCcEEEEEEC------------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610 296 MIMSAAYHPSEVQLITCST------------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 356 (515)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 356 (515)
....+.|.++|.+.+.... ...+..++..+++...-+..+....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3677899999988774432 226777888888877766655557899999999999887763
No 378
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.17 E-value=21 Score=34.92 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=29.7
Q ss_pred CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy17610 126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV 164 (515)
Q Consensus 126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 164 (515)
.|.++.+. ..++++.|.|.++|+|++.+++++....-
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555553 56999999999999999999988877654
No 379
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.20 E-value=42 Score=35.52 Aligned_cols=39 Identities=13% Similarity=0.213 Sum_probs=32.5
Q ss_pred ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeec
Q psy17610 442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE 480 (515)
Q Consensus 442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 480 (515)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345666777888999999999999999999999887643
No 380
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=66.71 E-value=1.1e+02 Score=30.53 Aligned_cols=104 Identities=15% Similarity=0.043 Sum_probs=48.7
Q ss_pred EEEEEEcCCC-cEEEEEECCCeEEEE-eCCC----CceEEEEe--cCCCccEEEEEEcCCCCEEEEEcCCC-eEEEEEcc
Q psy17610 297 IMSAAYHPSE-VQLITCSTNKMIDYW-ETCD----GSIIRSLE--GSDVAAVNCVDFVDDGKYFLTGGADQ-IVKMWMYR 367 (515)
Q Consensus 297 ~~~~~~~~~~-~~l~~~~~~~~i~~~-d~~~----~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~ 367 (515)
...+.++|.. ..++.+. ++.|..- |..+ +.....+. ......+..+...|.+..|+.+..|. .++--|+.
T Consensus 385 ~~~l~idp~~~~~~~~g~-~~g~~~s~d~g~w~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~l~~~~~d~g~~~~~d~~ 463 (737)
T 2cn3_A 385 IGDIEIDPFNSDRMMYVT-GATIYGCDNLTDWDRGGKVKIEVKATGIEECAVLDLVSPPEGAPLVSAVGDLVGFVHDDLK 463 (737)
T ss_dssp CCCEEECTTCTTCEEEEC-SSCEEEESCGGGGGGTCCEEEEECCTTCBCCBEEEEECCSSSCSEEEEETTTBCCEESSTT
T ss_pred cccEEECCCCCCcEEEeC-CCeEEeecCCCccccCCceeEEEcCCCceeeeeeeEEcCCCCCeeEEEEeccCCeEEcccc
Confidence 4568888854 4555553 4444332 1110 11111111 22223455566677766666665443 33322333
Q ss_pred CCeeeeeccCCCCCeeEEEECCC--CcEEEEEeCCCc
Q psy17610 368 EGVPCFVGIGHAASITKIKISPD--KKVIVSVSADGG 402 (515)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~ 402 (515)
+.... .+.........+++..+ ...++++..|+.
T Consensus 464 ~~~~~-~~~~~~~~~~~i~~ag~~~~~~v~vG~~dg~ 499 (737)
T 2cn3_A 464 VGPKK-MHVPSYSSGTGIDYAELVPNFMALVAKADLY 499 (737)
T ss_dssp SCCSS-CSCTTCSEEEEEEEETTEEEEEEEEEECSSC
T ss_pred cCCcc-ccCCccccccceeecccCCCeEEEEECcCCC
Confidence 21111 11223334667888665 245667766664
No 381
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=61.59 E-value=16 Score=35.53 Aligned_cols=36 Identities=11% Similarity=0.386 Sum_probs=27.2
Q ss_pred EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECC
Q psy17610 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN 111 (515)
Q Consensus 75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~ 111 (515)
+.+.....+|..|.+++++++|.+++.++.+++ .+.
T Consensus 463 i~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV-Pl~ 498 (667)
T 4gz8_A 463 MTVFREPTTISAMELSTKQQQLYIGSTAGVAQL-PLH 498 (667)
T ss_dssp EECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE-ESC
T ss_pred EeecCCCceeeeEEEcCCCCEEEEEECCEEEEE-Ehh
Confidence 344556788999999999999999988864443 444
No 382
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.70 E-value=46 Score=32.66 Aligned_cols=36 Identities=19% Similarity=0.336 Sum_probs=28.5
Q ss_pred EEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc
Q psy17610 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG 481 (515)
Q Consensus 444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 481 (515)
|.++.+ +..++++-+.|.++|+|++.+++++.+..-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444433 477999999999999999999998766543
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=57.92 E-value=23 Score=33.15 Aligned_cols=29 Identities=14% Similarity=0.387 Sum_probs=23.4
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEE
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFL 107 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i 107 (515)
....+|..|.+++++.+|.+++.++.++|
T Consensus 459 ~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 459 REPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 34678999999999999999988865443
No 384
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=57.71 E-value=1.6e+02 Score=29.57 Aligned_cols=148 Identities=7% Similarity=0.011 Sum_probs=76.8
Q ss_pred CCcEEEEEEecC-CCEEEEEecCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCC-cEEEEEecCCc----E
Q psy17610 81 DSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNF-SSVFATCSKND----I 148 (515)
Q Consensus 81 ~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~-~~l~~~~~d~~----i 148 (515)
.+.|.+|+++|. ...+++++..+.|+..+ +.|+.-..+... ....|.++++.|.. ..++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 45667777777666655 334444433321 12469999999853 34555443321 3
Q ss_pred EEEeC-CCCceeEEEEec-------C--eEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecC-----CCCCCe
Q psy17610 149 RIWSV-RTLNELLRISVM-------N--MICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPN-----AHNRGV 212 (515)
Q Consensus 149 ~iw~~-~~~~~~~~~~~~-------~--~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-----~~~~~v 212 (515)
.||.. +.|+.=..+... . ..+..+++.|. .+.++.+...+.|. ...+.|+.-..+.. .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccccCCCCCe
Confidence 44433 334332222211 0 12345777764 34555555344332 22233443323311 112458
Q ss_pred EEEEEcC-CCCEEEEecCC
Q psy17610 213 TALAITQ-DGTRLLSGGGE 230 (515)
Q Consensus 213 ~~~~~~~-~~~~l~~~~~d 230 (515)
..+.++| ++..++.+..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 8899988 44455555544
No 385
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=54.76 E-value=1.2e+02 Score=27.15 Aligned_cols=167 Identities=9% Similarity=0.055 Sum_probs=91.3
Q ss_pred CeEEEEecCCC--ceEEEecCC-----CCCCeEEEEEc---CC----CCEEEE-ecCCCcEEEEEccCCceeeEE-----
Q psy17610 188 GFIRCFTPQSG--KLKFIIPNA-----HNRGVTALAIT---QD----GTRLLS-GGGEGQVRIWKLTRESQSLQC----- 247 (515)
Q Consensus 188 g~i~~~~~~~~--~~~~~~~~~-----~~~~v~~~~~~---~~----~~~l~~-~~~d~~i~iw~~~~~~~~~~~----- 247 (515)
-+|.+||+.++ +.++.+..+ ....+..+.+. |+ +.++.. =+..+.|.++|+.++..-.+.
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 35778888888 777666432 23457788887 22 233333 334678999998654322111
Q ss_pred -------eeccc----cCceEEEEEecC----CCEEEEEeCCCcEEEEEccc--------ceEEEEEEcC---ccEEEEE
Q psy17610 248 -------VLKEH----TSSVSVIQIKSD----SKEAMSASTDGTCVLWDLIK--------STRLIIMILP---SMIMSAA 301 (515)
Q Consensus 248 -------~~~~~----~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~--------~~~~~~~~~~---~~~~~~~ 301 (515)
...+. ...+..|+++|+ ++.|......+. ++|.+.+ ...++.+... .....++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 11111 246788888887 677776665442 3333321 1122222222 3445667
Q ss_pred Ec-CCCcEEEEEECCCeEEEEeCCC-C---ceEEEE-ecCCCccEEEEEEcCCCCEEEEE
Q psy17610 302 YH-PSEVQLITCSTNKMIDYWETCD-G---SIIRSL-EGSDVAAVNCVDFVDDGKYFLTG 355 (515)
Q Consensus 302 ~~-~~~~~l~~~~~~~~i~~~d~~~-~---~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~ 355 (515)
+. .+|..+++--....|..|+..+ . +....+ ....-..+..+.+.++|.+.+..
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 75 5777777777788999999875 1 112222 22222345566665555544443
No 386
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=51.46 E-value=1.1e+02 Score=25.59 Aligned_cols=148 Identities=11% Similarity=-0.011 Sum_probs=74.9
Q ss_pred EEEEEcCCCeEEEEEccCCee-eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccc
Q psy17610 351 YFLTGGADQIVKMWMYREGVP-CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRST 429 (515)
Q Consensus 351 ~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 429 (515)
.+++.+.+|.|+--....... ...+... +.+..+........|+..+..|.++-......... +.. .. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~----r~~-G~---~- 73 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSA----RGQ-GE---P- 73 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCS----SSC-CE---E-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCc----CCC-Ce---E-
Confidence 455667777776554432111 1122233 33444433334445666778888766655432111 000 00 0
Q ss_pred ccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-------CeeeeeecccccceEEEEEEc-CCCcEEEE
Q psy17610 430 ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFV-DDGKYFLT 501 (515)
Q Consensus 430 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s 501 (515)
-...........|..+....++.+|+.++..|.++...+.. |.....+... +.+..+... .++..++.
T Consensus 74 --i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~--d~lv~~~~~~~~~~~i~l 149 (256)
T 1zvt_A 74 --LTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN--AHVMPPVVIEDASDMLLA 149 (256)
T ss_dssp --GGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT--CCBCCCEECCCTTCEEEE
T ss_pred --eeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC--CEEEEEEEecCCCCEEEE
Confidence 00011111233455554434567788889999999888743 2333333322 445555555 34556777
Q ss_pred eecCCeEEEEE
Q psy17610 502 GGADQIVKICL 512 (515)
Q Consensus 502 ~~~dg~v~iw~ 512 (515)
.+.+|.+..+.
T Consensus 150 ~T~~G~~lrf~ 160 (256)
T 1zvt_A 150 ITQAGRMLMFP 160 (256)
T ss_dssp EETTSEEEEEE
T ss_pred EcCCCeEEEEE
Confidence 88888776554
No 387
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=51.30 E-value=2e+02 Score=28.64 Aligned_cols=105 Identities=7% Similarity=-0.008 Sum_probs=57.2
Q ss_pred CcEEEEEEecCC-CEEEEEecCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCC-cEEEEEecC-------C
Q psy17610 82 SGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNF-SSVFATCSK-------N 146 (515)
Q Consensus 82 ~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~-~~l~~~~~d-------~ 146 (515)
+.|..|+++|.. ..+.++...+.|+..+-. |+.-..+... ....|.+|+++|.. ..++++... +
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 489999999953 566667766767666533 3444433321 12469999999833 455554431 1
Q ss_pred cEEEEeCC-CCceeEEEEec-C--------eEEEEEEEeeCC-CEEEEEeCC
Q psy17610 147 DIRIWSVR-TLNELLRISVM-N--------MICACIVFTYDG-KAILSGWND 187 (515)
Q Consensus 147 ~i~iw~~~-~~~~~~~~~~~-~--------~~v~~~~~~~~~-~~l~~~~~d 187 (515)
...||.-. .|+.-..+... . ..+..++++|.. +.++.+...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 24555443 33332222211 0 123568888753 556666533
No 388
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=44.44 E-value=51 Score=32.23 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=24.3
Q ss_pred EecCCCcEEEEEEecCC--CEEEEEecCceEEEEECC
Q psy17610 77 LLKDDSGISSLQYNPVN--NKVFVGTVNCEIFLIDMN 111 (515)
Q Consensus 77 ~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~iw~~~ 111 (515)
......+|..|.+++++ .+|.+++.++.+++ .+.
T Consensus 445 ~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v-pl~ 480 (663)
T 1olz_A 445 LFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLA 480 (663)
T ss_dssp CCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE-ESC
T ss_pred ccCCCCcceeeEeccCCCccEEEEEEcCeEEEE-Ech
Confidence 34456788899999988 89998887754443 443
No 389
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=43.67 E-value=2.7e+02 Score=27.99 Aligned_cols=149 Identities=9% Similarity=0.033 Sum_probs=72.6
Q ss_pred CCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeecc----ccCceEEEEEecCC-CEEEEEeCCCc----EE
Q psy17610 209 NRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----HTSSVSVIQIKSDS-KEAMSASTDGT----CV 278 (515)
Q Consensus 209 ~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-~~l~~~~~d~~----i~ 278 (515)
...|.+++++|. ...+++++..+.|...+=...+...+..... ....+..++++|.. ..++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999984 4556667766766555432222222211011 23468999998843 44444443211 23
Q ss_pred EEE-cccceEEEEEEcC--------c--cEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEec-----CCCccEE
Q psy17610 279 LWD-LIKSTRLIIMILP--------S--MIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEG-----SDVAAVN 341 (515)
Q Consensus 279 iwd-~~~~~~~~~~~~~--------~--~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~i~ 341 (515)
+|. ...++.-.....+ . .+..++++|.. ..++++...+.|.. ....++.-..+.. .....+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCeE
Confidence 332 2333333333221 1 24567888753 45555553443322 2222332222221 1114577
Q ss_pred EEEEcCC-CCEEEEEcCC
Q psy17610 342 CVDFVDD-GKYFLTGGAD 358 (515)
Q Consensus 342 ~~~~~~~-~~~l~~~~~d 358 (515)
.+.++|. +..++++..+
T Consensus 173 ~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEECTTSTTCEEEEESS
T ss_pred EEEECCCCCCEEEEEEcC
Confidence 8888883 4455555544
No 390
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=43.24 E-value=83 Score=22.05 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=15.0
Q ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610 341 NCVDFVDDGKYFLTGGADQIVKMWMYRE 368 (515)
Q Consensus 341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 368 (515)
..+.+..+|++++... ++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 3566777787666543 3333 676543
No 391
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=42.25 E-value=86 Score=21.96 Aligned_cols=26 Identities=4% Similarity=-0.004 Sum_probs=14.4
Q ss_pred EEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610 128 YDLQFPVNFSSVFATCSKNDIRIWSVRT 155 (515)
Q Consensus 128 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 155 (515)
..+.+..+|..++.- .++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d-~~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITD-DRLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEEC-TTSCE-EEECSC
T ss_pred EEEEEeCCCcEEEEC-CCCCE-EEECCC
Confidence 356677777655543 33443 676544
No 392
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=40.77 E-value=2.9e+02 Score=27.58 Aligned_cols=439 Identities=10% Similarity=0.025 Sum_probs=0.0
Q ss_pred CccCCCC-ceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEec
Q psy17610 1 MKTTPND-EFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLK 79 (515)
Q Consensus 1 ~~~~~~~-~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (515)
|.++|.+ ..+|+++..|.|+..+ +.|..-..+..
T Consensus 26 i~~~p~~~~~~y~~~~~ggv~~S~---------------------------------------------DgG~tW~~~~~ 60 (763)
T 3a0f_A 26 LVAHPTEKDLIYARTDIGGTYRWN---------------------------------------------AAKWEWEPITD 60 (763)
T ss_dssp EEECSSSTTCEEEEESSSCEEEEE---------------------------------------------TTTTEEEESCT
T ss_pred EEeCCCCCCEEEEEeccCcEEEEC---------------------------------------------CCCCCeeECcc
Q ss_pred ------------CCCcEEEEEEec-CCCEEEEEecC------ceEEEEECCCCceeEEeec--------cCccCeEEEEe
Q psy17610 80 ------------DDSGISSLQYNP-VNNKVFVGTVN------CEIFLIDMNSGFTLTLVNT--------CHTSAIYDLQF 132 (515)
Q Consensus 80 ------------~~~~v~~~~~s~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~--------~h~~~v~~~~~ 132 (515)
....|.+++++| +.+.++++..+ +.......+.|+.-..... ........+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v 140 (763)
T 3a0f_A 61 FIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAV 140 (763)
T ss_dssp TCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEE
T ss_pred CccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEE
Q ss_pred CCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeE------EEEEEEee-CCCEEEEEeCCC-eEEEEecCCCceEEEe
Q psy17610 133 PVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMI------CACIVFTY-DGKAILSGWNDG-FIRCFTPQSGKLKFII 204 (515)
Q Consensus 133 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------v~~~~~~~-~~~~l~~~~~dg-~i~~~~~~~~~~~~~~ 204 (515)
+|.....+.+...........+.|+.=..+...... +..+.+.| +...++++..++ .|..=.-....-....
T Consensus 141 ~p~~~~~v~a~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~ 220 (763)
T 3a0f_A 141 NPHWTDELWFGSRTQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWSQVG 220 (763)
T ss_dssp CTTSTTCEEEECSSSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCEECT
T ss_pred CCCCCCEEEEEeCCCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCccccC
Q ss_pred cCC--------------------CCCCeEEEEEcCCCCEEEE--------ecCCCcEEEEEccCCceeeEEeeccccCce
Q psy17610 205 PNA--------------------HNRGVTALAITQDGTRLLS--------GGGEGQVRIWKLTRESQSLQCVLKEHTSSV 256 (515)
Q Consensus 205 ~~~--------------------~~~~v~~~~~~~~~~~l~~--------~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v 256 (515)
... .......+.+.+++.+.++ +...+.+...+-...+..............
T Consensus 221 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~ 300 (763)
T 3a0f_A 221 GQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTY 300 (763)
T ss_dssp TCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEE
T ss_pred CCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccc
Q ss_pred --------------EEEEEecCCCEEEEEeCC---CcEEEEEcccceEEEEE----------------------------
Q psy17610 257 --------------SVIQIKSDSKEAMSASTD---GTCVLWDLIKSTRLIIM---------------------------- 291 (515)
Q Consensus 257 --------------~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~---------------------------- 291 (515)
..++++ +...++.+..+ ..........++.-...
T Consensus 301 ~~~~~~~~~~~gg~~~i~v~-~~~~v~~~~~~~~~~~~l~~S~DgG~tW~~~~~~~~~~ggdg~~~~~~~~~~~~~~~~~ 379 (763)
T 3a0f_A 301 PAPTGNKKVVPGGWNGISVG-NGDTVVVSTLDANGEDSVYLSRDAGNSWKDLGKLTTPAGAGGNSQKESDAKLRNGTPLP 379 (763)
T ss_dssp SCCCCCTTSCCCEEEEEEEC-STBCEEEEEESCTTSCCEEEESBTTSSEEEHHHHHSCTTCSSCEEEGGGCBCTTSCBCG
T ss_pred cccccccccccCCceeEEEc-CCCeEEEEecCCCCCCCEEEECCCCCCcccCccccccccccccCCCccccccccCCCCC
Q ss_pred ----EcCcc--------EEEEEEcCCCcEEEEEECCCeEEEEeCCC---Cc--eEEEEe-cCCCccEEEEEEcCCC-CEE
Q psy17610 292 ----ILPSM--------IMSAAYHPSEVQLITCSTNKMIDYWETCD---GS--IIRSLE-GSDVAAVNCVDFVDDG-KYF 352 (515)
Q Consensus 292 ----~~~~~--------~~~~~~~~~~~~l~~~~~~~~i~~~d~~~---~~--~~~~~~-~~~~~~i~~~~~~~~~-~~l 352 (515)
..+.. ...+.++|....++.+...+..+-.|... +. ....+. .-....+..+...+++ ..+
T Consensus 380 ~~~~~~~~d~~~~~~w~~~~l~i~P~~~~~~~g~~~gi~~S~d~g~~~~g~~~tw~~~~~gl~~~~~~~~~sp~~~~~~l 459 (763)
T 3a0f_A 380 WLSFQNRGSGIVGFGWWLAAILLDPFSDRLLYGTGAVIWATDAVSRADSNQAPSWYINTEGIEETAILVLKSPPAGPAHL 459 (763)
T ss_dssp GGGTTCTTSSEEECCSCCCCEEECTTSSCEEEECSSCEEEESCGGGGGGTCCCCEEECCTTCBCCBEEEEECCSSSSCSC
T ss_pred cccCCcccccccccCceeeeEEECCCCCeEEEecCceEEeECCCcccccCCcceeEECcCCcceeeeeeEEcCCCCCcee
Q ss_pred EEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc-EEEEEeCC----------CcEEE-------EeCCCCcCc
Q psy17610 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK-VIVSVSAD----------GGIFL-------WTFPELEDD 414 (515)
Q Consensus 353 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d----------g~i~i-------w~~~~~~~~ 414 (515)
+.+..|.-...++-............-.....++|++... .++..+.+ +.|.+ |........
T Consensus 460 ~~~~~d~gg~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~vG~~d~~~~~~~~~g~i~~S~DgG~tW~~~~~~~~ 539 (763)
T 3a0f_A 460 FSGMYDLGGMRHDDFSVPQPMYSKPTFSSTDGLDFAGRAANVLARVGRNDHPDAGVAGCTQGAYTTNSGDSWTLFQTCVP 539 (763)
T ss_dssp EEEETTTBCBBCSCTTSCCCBCCSSCCSEEEEEEEETTEEEEEEEEEECSSCCTTCCSCTTEEEESSTTSSCEECSSCCT
T ss_pred EEEEccCCceEecCCccCCccccCCccccccceEeccCCCcEEEEEeCCCcccccccCCCcEEEECCCCcCCccCCCCCc
Q ss_pred cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec---CCeEEEEecCCCeeeeeecccccceEEEEE
Q psy17610 415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCDGSIIRSLEGSDVAAVNCVD 491 (515)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~ 491 (515)
...... +..++++|++..++-... ++.| +.....|+--..+.+.. .....+.
T Consensus 540 g~~~~~-----------------------~~~i~v~~~~~~~~~~~~~~~~~~v-~~S~D~G~tW~~~~~l~-~~~~~i~ 594 (763)
T 3a0f_A 540 SLEVGN-----------------------GGTIAVGADGKTFVWSPSKADGKGP-YTSSDYGKTWTAPSGLS-KQTTGIA 594 (763)
T ss_dssp TCBTTB-----------------------CCEEEECTTSSCEEEECSSCCSSCC-EEESSTTSCCBCCBSCC-CCCSCEE
T ss_pred ccccCC-----------------------cceEEEecCCCcEEEEecccCCCce-EEeCCCCCCCeecCCCC-CCcceEE
Q ss_pred EcCCCcEEEEeecCCeEEE
Q psy17610 492 FVDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 492 ~s~~~~~l~s~~~dg~v~i 510 (515)
.+|...-++.++.+|.|.+
T Consensus 595 ~d~~~~~~~y~g~~g~v~~ 613 (763)
T 3a0f_A 595 ADRVQANTFYVYVEGDFFV 613 (763)
T ss_dssp ECSSSTTCEEEEETTEEEE
T ss_pred EeccCCCEEEEEcCCCEEE
No 393
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=39.53 E-value=62 Score=30.91 Aligned_cols=29 Identities=10% Similarity=0.190 Sum_probs=23.0
Q ss_pred cCCCcEEEEEEecCCCEEEEEecCceEEE
Q psy17610 79 KDDSGISSLQYNPVNNKVFVGTVNCEIFL 107 (515)
Q Consensus 79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~i 107 (515)
....+|..|.++++...|.+++.++.+++
T Consensus 416 ~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 416 RRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp SSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred CCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 35678899999999999999888755444
No 394
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=36.10 E-value=1.2e+02 Score=28.82 Aligned_cols=70 Identities=21% Similarity=0.228 Sum_probs=45.3
Q ss_pred CCcEEEEEEecCCC--EEEEEecCceEEEEECCCCc---eeEE-e-eccCccCeE-EEEeCCCCcEEEEEecCCcEEE
Q psy17610 81 DSGISSLQYNPVNN--KVFVGTVNCEIFLIDMNSGF---TLTL-V-NTCHTSAIY-DLQFPVNFSSVFATCSKNDIRI 150 (515)
Q Consensus 81 ~~~v~~~~~s~~~~--~l~~~~~d~~i~iw~~~~~~---~~~~-~-~~~h~~~v~-~~~~~~~~~~l~~~~~d~~i~i 150 (515)
....++|+....++ .+..|+.+|.|.-..+..+. .+.. + +.....+|. .|.++++..+|++++.++.++|
T Consensus 399 ~~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 399 RDRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SSCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ccceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 44688888877554 46778999988776654321 1111 1 112346785 8999999888888887654444
No 395
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.23 E-value=1.1e+02 Score=28.86 Aligned_cols=68 Identities=9% Similarity=0.036 Sum_probs=44.0
Q ss_pred cEEEeeeccCC--cEEEEeecCCeEEEEecCCC----eeeeeecc-cccceEE-EEEEcCCCcEEEEeecCCeEEE
Q psy17610 443 MIMSAAYHPSE--VQLITCSTNKMIDYWETCDG----SIIRSLEG-SDVAAVN-CVDFVDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 443 ~i~~~~~s~~~--~~l~~~~~dg~v~iwd~~~~----~~~~~~~~-~~~~~v~-~~~~s~~~~~l~s~~~dg~v~i 510 (515)
.+++++....+ ..++.|+.+|.|.-..+..+ ..+..+.- ....+|. .|.+++++.+|..++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 46666655433 46778899998765554322 12222221 1126785 8999999999999998887765
No 396
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=34.09 E-value=4.1e+02 Score=27.39 Aligned_cols=39 Identities=15% Similarity=0.053 Sum_probs=33.6
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610 255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL 293 (515)
Q Consensus 255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 293 (515)
.+.+++..++..++++.+.|+++|+|++.+++++.....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 456777778888999999999999999999999887654
No 397
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=29.98 E-value=3e+02 Score=24.63 Aligned_cols=291 Identities=11% Similarity=0.024 Sum_probs=0.0
Q ss_pred EEEcCCCCEEEEecCCCcEEEEEcc--------CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-cEEEE-----
Q psy17610 215 LAITQDGTRLLSGGGEGQVRIWKLT--------RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-TCVLW----- 280 (515)
Q Consensus 215 ~~~~~~~~~l~~~~~d~~i~iw~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw----- 280 (515)
+.++.-..+.+.-..||.|..|=.. ..................-..+..-..+.+....++ .|+.|
T Consensus 19 ~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n~~ 98 (406)
T 4d9s_A 19 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDF 98 (406)
T ss_dssp EEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECCGG
T ss_pred EEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCCCC
Q ss_pred ------EcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEE-----------eCCCCceEEEEecCCCccEEEE
Q psy17610 281 ------DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW-----------ETCDGSIIRSLEGSDVAAVNCV 343 (515)
Q Consensus 281 ------d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~-----------d~~~~~~~~~~~~~~~~~i~~~ 343 (515)
+.........+.......-..+.....+.++-..+|.++.| +.........+.......|..+
T Consensus 99 GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~v 178 (406)
T 4d9s_A 99 GRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 178 (406)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEE
T ss_pred cCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEE
Q ss_pred EEcCCCCEEEEEcCCCeEEEEE------------ccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610 344 DFVDDGKYFLTGGADQIVKMWM------------YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL 411 (515)
Q Consensus 344 ~~~~~~~~l~~~~~dg~i~i~d------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 411 (515)
+...+ ..++-..+|.|+.|- .....+..........|..++. -..+.+....+|.|..|-....
T Consensus 179 a~G~~--hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~ht~~l~~~G~v~~wG~n~~ 254 (406)
T 4d9s_A 179 AAGAE--HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--GWRHTISVSYSGALYTYGWSKY 254 (406)
T ss_dssp EECSS--EEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--CSSEEEEEETTCCEEEEECCTT
T ss_pred ecCCC--eEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--CCCcEEEEcCCCCEEEeeCCCC
Q ss_pred cCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCCeEEEEecCCCeeeeeecccccceEEEE
Q psy17610 412 EDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCV 490 (515)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~ 490 (515)
........................+.......-..++...+|+..+-|. ..|.+-+=+.........+.......|..+
T Consensus 255 GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v 334 (406)
T 4d9s_A 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 334 (406)
T ss_dssp STTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEE
T ss_pred CCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEE
Q ss_pred EEcCCCcEEEEeecCCeEEEE
Q psy17610 491 DFVDDGKYFLTGGADQIVKIC 511 (515)
Q Consensus 491 ~~s~~~~~l~s~~~dg~v~iw 511 (515)
+. -....+.-..||.|..|
T Consensus 335 a~--G~~hs~alt~~G~v~~w 353 (406)
T 4d9s_A 335 SC--GWRHTLAVTERNNVFAW 353 (406)
T ss_dssp EE--CSSEEEEEETTSCEEEE
T ss_pred Ee--CCCeEEEEeCCCCEEEe
No 398
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=26.02 E-value=3.1e+02 Score=25.87 Aligned_cols=69 Identities=12% Similarity=0.248 Sum_probs=44.7
Q ss_pred CcEEEEEEecC-C-CEEEEEecCceEEEEECC-CC--ceeEEeeccCccCe-EEEEeCCCCcEEEEEecCCcEEE
Q psy17610 82 SGISSLQYNPV-N-NKVFVGTVNCEIFLIDMN-SG--FTLTLVNTCHTSAI-YDLQFPVNFSSVFATCSKNDIRI 150 (515)
Q Consensus 82 ~~v~~~~~s~~-~-~~l~~~~~d~~i~iw~~~-~~--~~~~~~~~~h~~~v-~~~~~~~~~~~l~~~~~d~~i~i 150 (515)
...++|+.... + ..+..|+.+|.|.-.-+. ++ ..+..+.-....+| ..|.++++...|++++..+.++|
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 46888887763 3 345668899998765553 21 11222222345678 48999999889999887776665
No 399
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.91 E-value=1.6e+02 Score=27.43 Aligned_cols=68 Identities=1% Similarity=0.092 Sum_probs=42.6
Q ss_pred cEEEeeecc----CC--cEEEEeecCCeEEEEecC-CCe-------eeeeecc-cccceEEEEEEcCCCcEEEEeecCCe
Q psy17610 443 MIMSAAYHP----SE--VQLITCSTNKMIDYWETC-DGS-------IIRSLEG-SDVAAVNCVDFVDDGKYFLTGGADQI 507 (515)
Q Consensus 443 ~i~~~~~s~----~~--~~l~~~~~dg~v~iwd~~-~~~-------~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~ 507 (515)
..++++... ++ ..++.|+.+|.|.-.-+. .+. .+..+.- ....+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 355555542 23 357788999987543322 211 2222222 12378999999999999999999987
Q ss_pred EEE
Q psy17610 508 VKI 510 (515)
Q Consensus 508 v~i 510 (515)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 400
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=25.61 E-value=1e+02 Score=30.18 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=20.9
Q ss_pred CCCcE-EEEEEecCCCEEEEEecCceEEE
Q psy17610 80 DDSGI-SSLQYNPVNNKVFVGTVNCEIFL 107 (515)
Q Consensus 80 ~~~~v-~~~~~s~~~~~l~~~~~d~~i~i 107 (515)
...+| ..|.++++..+|.+++..+.+++
T Consensus 447 ~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 447 DGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred CCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 45666 68899999899999887754444
No 401
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.74 E-value=1.3e+02 Score=28.67 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=22.2
Q ss_pred CCcEEEEEEecCCCEEEEEecCceEEE
Q psy17610 81 DSGISSLQYNPVNNKVFVGTVNCEIFL 107 (515)
Q Consensus 81 ~~~v~~~~~s~~~~~l~~~~~d~~i~i 107 (515)
..+|..|.+++++..|.+++.++.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 467889999999999999988865554
No 402
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.31 E-value=2e+02 Score=19.94 Aligned_cols=53 Identities=8% Similarity=0.101 Sum_probs=24.9
Q ss_pred EEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610 342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT 407 (515)
Q Consensus 342 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~ 407 (515)
.+.+..||++++... ++ +|...+.. ...-..+.+..+|++++.. .++...+|.
T Consensus 23 ~L~~q~dGnLvl~~~-~~---vW~snt~~--------~~~~~~l~l~~dGNLVl~~-~~~~~~vW~ 75 (111)
T 3mez_A 23 AFVMQGDCNLVLYNE-AG---GFQSNTHG--------RGVDCTLRLNNRGQLEIHS-ANSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECS-SC---CEECCCTT--------SCSSCEEEECTTSCEEEEC-SSCSSCSEE
T ss_pred EEEEccCCeEEEECC-CC---EEECCccc--------CCcCEEEEEcCCCcEEEEe-CCCCEEEEE
Confidence 455566666555332 22 66543321 1112346666677655542 333334563
No 403
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=20.40 E-value=1.8e+02 Score=27.41 Aligned_cols=68 Identities=7% Similarity=-0.036 Sum_probs=43.0
Q ss_pred cEEEeeeccC--CcEEEEeecCCeEEEEecC-CC--eeeeeecccccceE-EEEEEcCCCcEEEEeecCCeEEE
Q psy17610 443 MIMSAAYHPS--EVQLITCSTNKMIDYWETC-DG--SIIRSLEGSDVAAV-NCVDFVDDGKYFLTGGADQIVKI 510 (515)
Q Consensus 443 ~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~-~~--~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~v~i 510 (515)
..++++...- ...+..|+++|.|.-.-+. ++ ..+..+.-....+| ..|.++++..+|..++.++.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 3555555432 2456788899987644432 21 12223222233677 48999999999999999988776
No 404
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.30 E-value=6.1e+02 Score=24.75 Aligned_cols=69 Identities=9% Similarity=0.059 Sum_probs=43.6
Q ss_pred CcEEEEEEe----cCCC---EEEEEecCceEEEE-ECCCCceeEEe--eccCccCeEEEEeCCCC--cEEEEEecCCcEE
Q psy17610 82 SGISSLQYN----PVNN---KVFVGTVNCEIFLI-DMNSGFTLTLV--NTCHTSAIYDLQFPVNF--SSVFATCSKNDIR 149 (515)
Q Consensus 82 ~~v~~~~~s----~~~~---~l~~~~~d~~i~iw-~~~~~~~~~~~--~~~h~~~v~~~~~~~~~--~~l~~~~~d~~i~ 149 (515)
...++|+.. .+++ .+..|+.+|.|.-. ....+..+... .-....+|..|.++++. .+|++++.++.++
T Consensus 397 ~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 397 VNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred CceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 356788764 3443 67789999987554 44332222221 11245689999999987 8888887766555
Q ss_pred E
Q psy17610 150 I 150 (515)
Q Consensus 150 i 150 (515)
|
T Consensus 477 v 477 (663)
T 1olz_A 477 A 477 (663)
T ss_dssp E
T ss_pred E
Confidence 4
Done!