RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17610
(515 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 116 bits (291), Expect = 9e-30
Identities = 60/326 (18%), Positives = 123/326 (37%), Gaps = 26/326 (7%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
S ++ + ++PV + + + + I + D +G HT ++ D+ F + +
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
+ + I++W + + + + + + +G I+S D I+ + Q+G
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135
Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
H V + QDGT + S + VR+W + ++ + L+EH V I
Sbjct: 136 VKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHRHVVECIS 192
Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320
+S + + G+ L++ S +K I
Sbjct: 193 WAPESSYSSISEATGSETKK---------------------SGKPGPFLLSGSRDKTIKM 231
Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA 380
W+ G + +L G D V V F GK+ L+ D+ +++W Y+ H
Sbjct: 232 WDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH 290
Query: 381 SITKIKISPDKKVIVSVSADGGIFLW 406
+T + +V+ S D + +W
Sbjct: 291 FVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 112 bits (279), Expect = 4e-28
Identities = 54/306 (17%), Positives = 113/306 (36%), Gaps = 5/306 (1%)
Query: 206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV-SVIQIKSD 264
+ H VT + + ++S + +++W E+ + LK HT SV + S
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSG 71
Query: 265 SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324
A ++ + + + S + P+ +++ S +K I WE
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
G +++ G V V DG + DQ V++W+ H +
Sbjct: 132 TGYCVKTFTGHR-EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
I +P+ A G + + SR + K+ + + ++ + +
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504
+H +++C+ +K + W+ + +++L + V +DF Y +TG
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSV 309
Query: 505 DQIVKI 510
DQ VK+
Sbjct: 310 DQTVKV 315
Score = 92.9 bits (229), Expect = 2e-21
Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 1/263 (0%)
Query: 248 VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV 307
L H S V+ + +SAS D T +WD + + +
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367
+L+ + M G V+ V + +G + ++ D+ +KMW +
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISR 427
G GH + ++ + D +I S S D + +W E
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191
Query: 428 STARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV 487
S A + + + + L++ S +K I W+ G + +L G D V
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWV 250
Query: 488 NCVDFVDDGKYFLTGGADQIVKI 510
V F GK+ L+ D+ +++
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRV 273
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 104 bits (260), Expect = 2e-25
Identities = 50/306 (16%), Positives = 88/306 (28%), Gaps = 24/306 (7%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
H + A+ D L+S +G++ IW + + + +S V
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY--TTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY---WETC 324
D C +++L + + + D
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
+ + V + D + F++G D K+W REG+ GH + I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
I P+ + S D L+ + I
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRA------------------DQELMTYSHDNIICGI 273
Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504
S ++ S L+ + + W+ L G D V+C+ DDG TG
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD-NRVSCLGVTDDGMAVATGSW 332
Query: 505 DQIVKI 510
D +KI
Sbjct: 333 DSFLKI 338
Score = 98.3 bits (243), Expect = 3e-23
Identities = 43/286 (15%), Positives = 95/286 (33%), Gaps = 2/286 (0%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL 182
H + IY + + + + + + IW T N++ I + + + G +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242
G D + ++ + + L+ + G E+
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAA 301
HT V + + D++ +S + D + LWD+ + S I +
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 302 YHPSEVQLITCSTNKMI-DYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360
+ P+ T S + + D ++ + + + V F G+ L G D
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293
Query: 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
+W + V GH ++ + ++ D + + S D + +W
Sbjct: 294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 83.6 bits (205), Expect = 3e-18
Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 3/161 (1%)
Query: 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
HT + L + + ++W VR + I F +G A
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 182 LSGWNDGFIR-CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR 240
+G +D R +L + G+T+++ ++ G LL+G + +W
Sbjct: 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA-- 299
Query: 241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281
VL H + VS + + D + S D +W+
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 80.9 bits (198), Expect = 2e-17
Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 26/302 (8%)
Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
+ + D + ++S DG + + + IP + V A G + GG +
Sbjct: 60 AMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGGLD 118
Query: 231 GQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
I+ L +++ + + D + +++S D TC LWD+ +
Sbjct: 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178
Query: 290 IMILPSM-IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 348
+ +MS + P ++ + + W+ +G ++ G + + +N + F +
Sbjct: 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPN 237
Query: 349 GKYFLTGGADQIVK--MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
G F TG D + + + + IT + S +++++ D +W
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 466
+ ++ R + + + T S + +
Sbjct: 298 DA--------LKADRAGVLAGHDNR------------VSCLGVTDDGMAVATGSWDSFLK 337
Query: 467 YW 468
W
Sbjct: 338 IW 339
Score = 54.4 bits (129), Expect = 1e-08
Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 27/207 (13%)
Query: 330 RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP 389
R+L G A + + + D + ++ D + +W ++ + +P
Sbjct: 49 RTLRGHL-AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107
Query: 390 DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM------ 443
+ D ++ E +V SR L+ + I+ S
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 444 -------------------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV 484
+MS + P ++ + + W+ +G ++ G +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE- 226
Query: 485 AAVNCVDFVDDGKYFLTGGADQIVKIC 511
+ +N + F +G F TG D ++
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLF 253
Score = 51.7 bits (122), Expect = 9e-08
Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFL-IDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
+S I+++ + P N G+ + L +T + I + F + +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIR 191
A + +W + ++ + +C+ T DG A+ +G D F++
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 104 bits (259), Expect = 6e-25
Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 37/331 (11%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ----------------CVLKE 251
H V + + DG L +G ++++++ S +
Sbjct: 61 HTSVVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT 311
+ + D K + + D +WD+ ++I+ + + + +
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179
Query: 312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP 371
+ + DGKY G D+ V++W G
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239
Query: 372 CF-------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK 424
G GH S+ + + D + +VS S D + LW + + S
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL--------QNANNKSD 291
Query: 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG--- 481
+ + + + ++S A ++ +++ S ++ + +W+ G+ + L+G
Sbjct: 292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 351
Query: 482 --SDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
VA N + F TG D +I
Sbjct: 352 SVISVAVANGSSLGPEYNVFATGSGDCKARI 382
Score = 83.3 bits (204), Expect = 6e-18
Identities = 49/332 (14%), Positives = 107/332 (32%), Gaps = 47/332 (14%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICA------------ 170
HTS + ++F + AT +++ V + + R+S +
Sbjct: 61 HTSVVCCVKFSND-GEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 171 ------CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
+ F+ DGK + +G D IR + ++ + I+ ++ +
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN---RKIVMILQGHEQDIYSLDYFPSGD 176
Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK 284
G G + + L +V D K + S D +WD
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236
Query: 285 STRLIIMILPSM--------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 336
+ + + + S + +++ S ++ + W + + + +
Sbjct: 237 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296
Query: 337 V-----------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKI 385
V V + +Y L+G D+ V W + G P + GH S+ +
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356
Query: 386 KI------SPDKKVIVSVSADGGIFLWTFPEL 411
+ P+ V + S D +W + ++
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 54.4 bits (129), Expect = 1e-08
Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 56/315 (17%)
Query: 208 HNRGVTALAITQDGTR---LLSGGGEGQVRIW--KLTRESQSLQCVLKEHTSSVSVIQIK 262
H++ + + D L ++ L RE +HTS V ++
Sbjct: 12 HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71
Query: 263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE 322
+D + + + T ++ + + + + S +A P + + ++
Sbjct: 72 NDGEYLATGC-NKTTQVYRVSDGSLVARL---SDDSAANKDPENLNTSSSPSSD------ 121
Query: 323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI 382
+ V F DGK+ TG D+++++W + GH I
Sbjct: 122 ---------------LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI 166
Query: 383 TKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS 442
+ P +VS S D + +W L + I
Sbjct: 167 YSLDYFPSGDKLVSGSGDRTVRIWDLRT--------------------GQCSLTLSIEDG 206
Query: 443 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV------AAVNCVDFVDDG 496
+ A + S ++ + W++ G ++ L+ + +V V F DG
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 266
Query: 497 KYFLTGGADQIVKIC 511
+ ++G D+ VK+
Sbjct: 267 QSVVSGSLDRSVKLW 281
Score = 44.4 bits (103), Expect = 2e-05
Identities = 16/130 (12%), Positives = 42/130 (32%), Gaps = 17/130 (13%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-----------FTLTLVNTCHTSAIYD 129
+ S+ + V G+++ + L ++ + T + H +
Sbjct: 254 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 313
Query: 130 LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI-----SVMNM-ICACIVFTYDGKAILS 183
+ N + + + W ++ N LL + SV+++ + + +
Sbjct: 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 373
Query: 184 GWNDGFIRCF 193
G D R +
Sbjct: 374 GSGDCKARIW 383
Score = 31.7 bits (70), Expect = 0.21
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Query: 456 LITCSTNKMIDYW-----ETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
+ TN + D + +SL+ + V CV F +DG+Y TG
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTS--VVCCVKFSNDGEYLATGCNKTTQVY 88
Query: 511 CL 512
+
Sbjct: 89 RV 90
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 86.4 bits (212), Expect = 4e-19
Identities = 35/320 (10%), Positives = 96/320 (30%), Gaps = 20/320 (6%)
Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEHTSSVSVIQIK 262
I A ++ + I + LL +G + ++K +++++ + + +
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65
Query: 263 SDSKEAMSASTDGTCVLWDLIKS---TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
++ + T +L + + + ++ + + +LI S + +I+
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 320 YWETCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG----V 370
+ + + + + G + V+ +
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 371 PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTA 430
+ +++ S DG + + F + DD S+ + + R
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245
Query: 431 RSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 490
+ T L + S + P L T ++ +I W I++ + +V +
Sbjct: 246 KDTNLA-----YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300
Query: 491 DFVDDGKYFLTGGADQIVKI 510
+D K
Sbjct: 301 AC--SDNILCLATSDDTFKT 318
Score = 63.7 bits (153), Expect = 1e-11
Identities = 30/311 (9%), Positives = 78/311 (25%), Gaps = 29/311 (9%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTC-HTSAIYDLQFPVNFSS 138
IS ++ P + + + + + + + + + L+ + + + F N
Sbjct: 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL 70
Query: 139 VFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS 197
+ +I + ++ G L + +
Sbjct: 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR 130
Query: 198 GKLKFIIPNAHNRGV------TALAITQDGTRLLSGGGEGQVRIWKL--TRESQSLQCVL 249
+I + + + +RL+ G QV+ ++L +
Sbjct: 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEES 190
Query: 250 KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL---------------- 293
V + + + +S DG +
Sbjct: 191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250
Query: 294 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL 353
+ S + P L T ++ +I W I++ + +V +
Sbjct: 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIAC--SDNILC 308
Query: 354 TGGADQIVKMW 364
+D K
Sbjct: 309 LATSDDTFKTN 319
Score = 57.6 bits (137), Expect = 1e-09
Identities = 31/288 (10%), Positives = 77/288 (26%), Gaps = 23/288 (7%)
Query: 64 DVSLYSAGVTALYLLKDDSGISSLQYNPVNNK-VFVGTVNCEIFLIDMNSGFTLTLVNTC 122
+ + V L L+ + + + ++VGTV EI +D+ + +
Sbjct: 39 KFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98
Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT------LNELLRISVMNMICACIVFTY 176
+ + A I + R + L + +
Sbjct: 99 EANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158
Query: 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG---VTALAITQDGTRLLSGGGEGQV 233
+ ++ G N+ ++ F + + ++ +G+V
Sbjct: 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRV 218
Query: 234 RIWKLTRESQSLQCVLK-------------EHTSSVSVIQIKSDSKEAMSASTDGTCVLW 280
+ + + V+ I+ K +A +DG W
Sbjct: 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278
Query: 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI 328
+L ++ + S+ L +++ D +I
Sbjct: 279 NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326
Score = 46.4 bits (108), Expect = 5e-06
Identities = 30/316 (9%), Positives = 82/316 (25%), Gaps = 30/316 (9%)
Query: 119 VNTCHTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVM----NMICACIV 173
+ I D++ + S+ S + ++ + + + + + C
Sbjct: 6 IEQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV 233
I G G I + N +L++ +G +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 234 RIWKLTRESQSLQCVLKEHTSSVS----VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
+ + V ++++ + + ++S + + + L
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 290 IM-----ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----------- 333
+ + A + S + + D +
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 334 ---GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD 390
+ VN ++F K+ T G+D I+ W + + +KI+
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK-KIKNFAKFNEDSVVKIACS 303
Query: 391 KKVIVSVSADGGIFLW 406
++ ++D
Sbjct: 304 DNILCLATSDDTFKTN 319
Score = 44.5 bits (103), Expect = 2e-05
Identities = 17/172 (9%), Positives = 40/172 (23%), Gaps = 23/172 (13%)
Query: 103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162
L + P + + + +
Sbjct: 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232
Query: 163 SVMNMI---------------CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA 207
S I F+ K + + +DG I C+ Q+ K
Sbjct: 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
+ + + I L + + ++ ++ + SS+ +I
Sbjct: 293 N--EDSVVKIACSDNILCLATSDDTFKTNAAIDQT------IELNASSIYII 336
Score = 33.7 bits (75), Expect = 0.052
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--AAVNCVDFVDDGKYFLT 501
I PS+ L+ S + + ++ + L S + C +F+D+ +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 502 GGADQIVKIC 511
G Q +
Sbjct: 74 VGTVQGEILK 83
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 81.8 bits (200), Expect = 1e-17
Identities = 40/289 (13%), Positives = 86/289 (29%), Gaps = 10/289 (3%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICA-----CIVFTYD 177
H + + + T K +++W + +S ++ + D
Sbjct: 50 HGEVVCAVTISNP-TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108
Query: 178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
G ++ G + + + + + +++
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168
Query: 238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI 297
++ + + +K + D T WDL + +L S I
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKL-WTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357
S Y P+ L + ++ + V + F GK+F++ G
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC--VLSLKFAYCGKWFVSTGK 285
Query: 358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
D ++ W G F ++S+ IS D K IV+ S D ++
Sbjct: 286 DNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Score = 79.5 bits (194), Expect = 7e-17
Identities = 50/329 (15%), Positives = 98/329 (29%), Gaps = 32/329 (9%)
Query: 187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT---RESQ 243
D I P+ + + H V A+ I+ + +GG +G V++W ++ +S
Sbjct: 31 DALIGPGIPRHARQINTL--NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP 87
Query: 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH 303
Q + + ++ D + T +WDL T I L S +
Sbjct: 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147
Query: 304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL--TGGADQIV 361
C + D + TGG D V
Sbjct: 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL 421
+ W RE + I + P + + + +
Sbjct: 208 RSWDLRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN------------ 254
Query: 422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG 481
+ + + + S ++S + ++ + +++ W T G+ I +
Sbjct: 255 ---------KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE 305
Query: 482 SDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
S +V D D KY +TG D+ +
Sbjct: 306 SS--SVLSCDISVDDKYIVTGSGDKKATV 332
Score = 63.7 bits (153), Expect = 1e-11
Identities = 43/326 (13%), Positives = 102/326 (31%), Gaps = 29/326 (8%)
Query: 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG----KLKFI 203
I R ++ ++ ++C + + + + +G G ++ + + +
Sbjct: 34 IGPGIPRHARQINTLNHGEVVC-AVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL 91
Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS 263
+ + + + DG L+ GG + IW L + ++ L + + I
Sbjct: 92 DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP 151
Query: 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET 323
DSK S +DG +WDL T + ++ S +
Sbjct: 152 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSW 210
Query: 324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT 383
+ + + + + + G++ G V++ + + + H + +
Sbjct: 211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL-HESCVL 269
Query: 384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM 443
+K + K VS D + W T + S
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAW---------------------RTPYGASIFQSKESSS 308
Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWE 469
++S + ++T S +K +E
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 59.4 bits (142), Expect = 2e-10
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL 225
+ F Y GK +S D + + G F + V + I+ D ++
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIV 322
Query: 226 SGGGEGQVRIWKL 238
+G G+ + ++++
Sbjct: 323 TGSGDKKATVYEV 335
Score = 53.7 bits (127), Expect = 2e-08
Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
+ + G+ + G + K + H V +L G
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN--KPDKYQLHLHESCVLSLKFAYCGKWF 280
Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283
+S G + + W+ + + + +SSV I D K ++ S D ++++I
Sbjct: 281 VSTGKDNLLNAWRT----PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
Score = 49.4 bits (116), Expect = 5e-07
Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 6/256 (2%)
Query: 68 YSAGVTALYLLKDDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSA 126
+ V+ L L D+ I S + P + VG + + T A
Sbjct: 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143
Query: 127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN 186
Y L + F+ CS +I +W + + + +CI + DG + +G
Sbjct: 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203
Query: 187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ 246
D +R + + G+ + + +L G L G V + + + +
Sbjct: 204 DNTVRSWDLREGRQLQ--QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE 306
H S V ++ K +S D W + S ++S +
Sbjct: 262 H---LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDD 318
Query: 307 VQLITCSTNKMIDYWE 322
++T S +K +E
Sbjct: 319 KYIVTGSGDKKATVYE 334
Score = 47.9 bits (112), Expect = 1e-06
Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 8/175 (4%)
Query: 305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
++Q + + +I I +L + V V + ++ TGG VK+W
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQINTLNHGE--VVCAVTISNPTRHVYTGG-KGCVKVW 77
Query: 365 -----MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR 419
+ V + I K+ PD ++ + +W +
Sbjct: 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 420 SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 474
+ S+ + A S + + A Q + D D S
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192
Score = 34.0 bits (76), Expect = 0.037
Identities = 6/68 (8%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK 145
SL++ + + G ++ + +S++ V+ +
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYG--ASIFQSKESSSVLSCDISVDDKYIVTGSGD 327
Query: 146 NDIRIWSV 153
++ V
Sbjct: 328 KKATVYEV 335
Score = 32.1 bits (71), Expect = 0.13
Identities = 18/120 (15%), Positives = 33/120 (27%), Gaps = 17/120 (14%)
Query: 397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL-PSMIMSAAYHPSEVQ 455
V+ADG + FP + I R R I + ++ +
Sbjct: 17 VTADGQMQPVPFPP-----------DALIGPGIPRHARQINTLNHGEVVCAVTISNPTRH 65
Query: 456 LITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGKYFLTGGADQIVKIC 511
+ T + W+ + D + + DG + GG + I
Sbjct: 66 VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 82.2 bits (201), Expect = 1e-17
Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 50/367 (13%)
Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGGG 229
C + D I N+ + + K + HN VT + D R+++ G
Sbjct: 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71
Query: 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
+ +W L + V+ + ++ + K+ S + +
Sbjct: 72 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131
Query: 290 IMILPSM-----IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS--------- 335
+ ++S +HP+ V L S + + + +
Sbjct: 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 191
Query: 336 --------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI 387
V+ V F +G D V + + + + +
Sbjct: 192 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 251
Query: 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447
+ ++ + D L+T+ D S ++ S R +
Sbjct: 252 ITESSLVAAGH-DCFPVLFTY----DSAAGKLSFGGRLDVPKQSSQRGL----------- 295
Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY----FLTGG 503
+ + K G+ + SL + +V+ + + GK F T G
Sbjct: 296 ----TARERFQNLDKKASSEGSAAAGAGLDSLHKN---SVSQISVLSGGKAKCSQFCTTG 348
Query: 504 ADQIVKI 510
D + I
Sbjct: 349 MDGGMSI 355
Score = 59.1 bits (141), Expect = 4e-10
Identities = 43/363 (11%), Positives = 100/363 (27%), Gaps = 30/363 (8%)
Query: 84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFAT 142
IS +N ++ + N E+ + + + + H + + + + S+ T
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD-SNRIVT 68
Query: 143 CSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-----NDGFIRCFTPQ 196
C + +W+++ + ++ + A +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS------------ 244
+ I V +L + L +G + + RI+ +
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 245 ----LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSA 300
L V + ++ S D T L D K + + ++ + A
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360
+E L+ + + + S G + +
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKK----VIVSVSADGGIFLWTFPELEDDVG 416
G + H S+++I + K + DGG+ +W LE +
Sbjct: 309 SSEGSAAAGAG--LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALK 366
Query: 417 DSR 419
D +
Sbjct: 367 DLK 369
Score = 55.6 bits (132), Expect = 6e-09
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI--GHAASITKIKISPDKKVI 394
V ++C + D + V ++ V H +T + +PD I
Sbjct: 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI 66
Query: 395 VSVSADGGIFLWTFP 409
V+ D ++WT
Sbjct: 67 VTCGTDRNAYVWTLK 81
Score = 44.5 bits (103), Expect = 2e-05
Identities = 23/265 (8%), Positives = 72/265 (27%), Gaps = 11/265 (4%)
Query: 252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQ 308
+S D + + +++ + + + L + + P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW---- 364
++TC T++ W + +L + + G+ V
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 365 -MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSS 423
V + +++ + P+ ++ + S D +++ E + + +
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185
Query: 424 KISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 483
+ + + ++ S + + D + + S+
Sbjct: 186 SKMPFGELMFESSSS--CGWVHGVCFSANGSRVAWVSHDSTVCLA-DADKKMAVATLASE 242
Query: 484 VAAVNCVDFVDDGKYFLTGGADQIV 508
+ V F+ + G V
Sbjct: 243 TLPLLAVTFITESSLVAAGHDCFPV 267
Score = 29.8 bits (65), Expect = 0.85
Identities = 5/27 (18%), Positives = 9/27 (33%)
Query: 484 VAAVNCVDFVDDGKYFLTGGADQIVKI 510
V ++C + D + V I
Sbjct: 7 VEPISCHAWNKDRTQIAICPNNHEVHI 33
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 77.9 bits (190), Expect = 3e-16
Identities = 50/346 (14%), Positives = 126/346 (36%), Gaps = 36/346 (10%)
Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
+ G I+SG +D ++ ++ +GK + H GV + + + G
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMRDNIII------SGS 74
Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
+++ +C+ + + +V + K +S S D T +WD I++ + + ++
Sbjct: 75 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD-IETGQCLHVL 133
Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
+ + ++++ + + M+ W+ + + +L+G DG +
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFDGIHV 190
Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
++G D +++W G GH + + +++ + ++VS +AD + +W
Sbjct: 191 VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIW------ 242
Query: 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472
T + + + ++ +IT S + + W+
Sbjct: 243 -------------DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289
Query: 473 GSIIRSLEGSDV----AAVNCVDFVDDGKYFLTGGADQIVKICLYI 514
G IR+L + V + + G + + L +
Sbjct: 290 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 335
Score = 77.2 bits (188), Expect = 5e-16
Identities = 55/340 (16%), Positives = 123/340 (36%), Gaps = 24/340 (7%)
Query: 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
DD I+ LQ+ N++ G+ + + + +G HT ++ Q N
Sbjct: 16 DDHVITCLQFCG--NRIVSGSDDNTLKVWSAVTG-KCLRTLVGHTGGVWSSQMRDNIIIS 72
Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
+T + ++ K ++SG D +R + ++G+
Sbjct: 73 GSTDRTLKVWNAETGECI----HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 128
Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
++ + DG R++SG + V++W E C+ + V
Sbjct: 129 CLHVL---MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE----TCLHTLQGHTNRVY 181
Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
++ D +S S D + +WD+ ++ I + +++ + L++ + + +
Sbjct: 182 SLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 240
Query: 320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG-----VPCFV 374
W+ G +++L+G + + + +T D VK+W + G +
Sbjct: 241 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300
Query: 375 GIGHAASITKIKISPDKKVIVSVSADGG----IFLWTFPE 410
G + +I+ S K V S +G + + F
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340
Score = 51.0 bits (120), Expect = 2e-07
Identities = 26/206 (12%), Positives = 71/206 (34%), Gaps = 21/206 (10%)
Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA 380
W + + L+G D + C+ F G ++G D +K+W G +GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 381 SITKIKISPDKKVIVSVSADGGIFLW----------------TFPELEDDVGDSRSLSSK 424
+ ++ + + S ++ L + S S +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV 484
+ + + + +++ + ++++ + + M+ W+ + + +L+G
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT- 177
Query: 485 AAVNCVDFVDDGKYFLTGGADQIVKI 510
DG + ++G D +++
Sbjct: 178 --NRVYSLQFDGIHVVSGSLDTSIRV 201
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 70.3 bits (170), Expect = 6e-14
Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 41/311 (13%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
++GV L D +++SG + ++IW + + +L HT SV +Q
Sbjct: 14 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQYDERVII 69
Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 327
S+ + + + +I +++ + V + + D D +
Sbjct: 70 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129
Query: 328 IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI 387
+ R L G D KY ++ D+ +K+W GH I ++
Sbjct: 130 LRRVLVGHR---AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186
Query: 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447
++VS S+D I LW + ++ +
Sbjct: 187 RDR--LVVSGSSDNTIRLWDI----------------------ECGACLRVLEGHEELVR 222
Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYF 499
++++ + + I W+ R+ G+ V + F D
Sbjct: 223 CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQI 280
Query: 500 LTGGADQIVKI 510
++ D + I
Sbjct: 281 VSSSHDDTILI 291
Score = 64.5 bits (155), Expect = 5e-12
Identities = 46/294 (15%), Positives = 93/294 (31%), Gaps = 25/294 (8%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
+ +Y LQ+ + + N I+IW TL ++ C+ +
Sbjct: 14 TSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70
Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
S + + I + + + +W
Sbjct: 71 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS-----KDRSIAVWD-MAS 124
Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA 301
+ +V + D K +SAS D T +W+ + + + A
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT-STCEFVRTLNGHKRGIAC 183
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
+ +++ S++ I W+ G+ +R LEG + D K ++G D +
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE---LVRCIRFDNKRIVSGAYDGKI 240
Query: 362 KMWMYREG---------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
K+W + + H+ + ++ D+ IVS S D I +W
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL--QFDEFQIVSSSHDDTILIW 292
Score = 56.0 bits (133), Expect = 3e-09
Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 14/187 (7%)
Query: 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161
+ I + DM S +TL + + + I++W+ T +
Sbjct: 114 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV-- 171
Query: 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG 221
++ Y + ++SG +D IR + + G ++ I D
Sbjct: 172 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC---IRFDN 228
Query: 222 TRLLSGGGEGQVRIWKLTRESQ-------SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274
R++SG +G++++W L L EH+ V +Q D + +S+S D
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 286
Query: 275 GTCVLWD 281
T ++WD
Sbjct: 287 DTILIWD 293
Score = 39.4 bits (90), Expect = 6e-04
Identities = 22/195 (11%), Positives = 61/195 (31%), Gaps = 24/195 (12%)
Query: 335 SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI 394
V C+ + D + ++G D +K+W + GH S+ ++ +
Sbjct: 13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70
Query: 395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKI-------------------SRSTARSTRL 435
S + ++ E+ + + + ++ L
Sbjct: 71 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL 130
Query: 436 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 495
+++ + +++ S ++ I W T +R+L G
Sbjct: 131 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK---RGIACLQYR 187
Query: 496 GKYFLTGGADQIVKI 510
+ ++G +D +++
Sbjct: 188 DRLVVSGSSDNTIRL 202
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 69.2 bits (167), Expect = 1e-13
Identities = 35/307 (11%), Positives = 74/307 (24%), Gaps = 16/307 (5%)
Query: 207 AHNRG-VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS 265
RG L T G ++ G V + S + + EH+ +V +
Sbjct: 14 RTARGTAVVLGNTPAGDKIQYCNGTS-VYTVPV--GSLTDTEIYTEHSHQTTVAKTSPSG 70
Query: 266 KEAMSASTDGTCVLWDLIKSTRLIIMILPSMI--MSAAYHPSEVQLITCSTNKMIDYWET 323
S G +WD ++T ++ +P + SE + I +
Sbjct: 71 YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
Query: 324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT 383
S A + EG P
Sbjct: 131 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190
Query: 384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM 443
+ ++ GG D L +
Sbjct: 191 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----------KTGVFEDDSLKNVAHSGS 240
Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 503
+ + P ++ + S +K I W + +++ + + + ++
Sbjct: 241 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 504 ADQIVKI 510
A+ +
Sbjct: 301 ANGFINF 307
Score = 64.5 bits (155), Expect = 5e-12
Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 10/280 (3%)
Query: 137 SSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ 196
C+ + V +L + + + + G SG G +R +
Sbjct: 29 GDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 88
Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV 256
G ++ ++ GEG+ R + +
Sbjct: 89 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARA 148
Query: 257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH---PSEVQLITCS 313
S+ S + P +
Sbjct: 149 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 208
Query: 314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD------DGKYFLTGGADQIVKMWMYR 367
+ I + DG+ E + V V DG + AD+ +K+W
Sbjct: 209 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 268
Query: 368 EG-VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
V + +G ++ I K+ +VS+SA+G I
Sbjct: 269 TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 51.1 bits (120), Expect = 1e-07
Identities = 47/309 (15%), Positives = 83/309 (26%), Gaps = 31/309 (10%)
Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
+ T G I N + S I H+ T + G SG
Sbjct: 22 VLGNTPAGDKIQYC-NGTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290
G VRIW T+ + L+ + + V I S+SK + + T
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139
Query: 291 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV---------- 340
L + + + D + +
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD 400
+ F G + + + H+ S+ + SPD I S SAD
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS 460
I +W +V +T + + I + ++ L++ S
Sbjct: 260 KTIKIW-------NV------------ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 461 TNKMIDYWE 469
N I++
Sbjct: 301 ANGFINFVN 309
Score = 50.3 bits (118), Expect = 2e-07
Identities = 36/289 (12%), Positives = 81/289 (28%), Gaps = 12/289 (4%)
Query: 86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK 145
L P +K+ ++ + + S T T + T H+ + + +
Sbjct: 22 VLGNTPAGDKIQYCNGTS-VYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 146 NDIRIW--SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI 203
++RIW + T I V + I + + K I +
Sbjct: 80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139
Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS 263
+ G + + EHT V ++
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199
Query: 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILP--------SMIMSAAYHPSEVQLITCSTN 315
D S DGT VL++ + T+ + + + P ++ + S +
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259
Query: 316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
K I W + +++ + + + ++ A+ +
Sbjct: 260 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 43.7 bits (101), Expect = 3e-05
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-SVSVIQIKSDSKEAMSASTD 274
+ DGT++ S + ++IW + + ++ + T + I + +S S +
Sbjct: 245 TWSPDGTKIASASADKTIKIWNV--ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
Query: 275 GTCVLWDL 282
G +
Sbjct: 303 GFINFVNP 310
Score = 36.4 bits (82), Expect = 0.007
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 137 SSVFATCSK-NDIRIWSVRTLNELLRISVMNMI-CACIVFTYDGKAILSGWNDGFIRCFT 194
+ A+ S I+IW+V TL I V I + + +A++S +GFI
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Query: 195 P 195
P
Sbjct: 310 P 310
Score = 36.0 bits (81), Expect = 0.008
Identities = 7/67 (10%), Positives = 16/67 (23%), Gaps = 2/67 (2%)
Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504
+ P+ ++ C+ + + G Y +G
Sbjct: 21 VVLGNTPAGDKIQYCNGTSVY-TVPVGSLTDTEIYTEHS-HQTTVAKTSPSGYYCASGDV 78
Query: 505 DQIVKIC 511
V+I
Sbjct: 79 HGNVRIW 85
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 68.8 bits (166), Expect = 3e-13
Identities = 44/341 (12%), Positives = 98/341 (28%), Gaps = 6/341 (1%)
Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
++ +++G +D IR + + K + + H+ GV AL G L+SG +
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRT 75
Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
VR+W + + + T I + K ++ S D T +W L K + +
Sbjct: 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 135
Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
+ P E + T G + GS + D +
Sbjct: 136 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLY 195
Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
+ G + +Y + +I + + + + L +
Sbjct: 196 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 255
Query: 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472
+ I A + + + ++ + + +
Sbjct: 256 LVSAAADG---SIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRS 312
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
G ++ + D + V+F D + +
Sbjct: 313 GKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
Score = 53.4 bits (126), Expect = 3e-08
Identities = 38/327 (11%), Positives = 80/327 (24%), Gaps = 30/327 (9%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
D G+ +L+Y V T T T D+ N +
Sbjct: 53 DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 112
Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
N + +W + + + + + + T
Sbjct: 113 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 172
Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
+ G + +L HT +
Sbjct: 173 IVVS------------------------GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 208
Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320
+ K +SAS D T +WDL + + + ++ + + + + +
Sbjct: 209 YDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 268
Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-GHA 379
+ ++ + L G++ ++ R G I A
Sbjct: 269 DANDYSRKFSYHHTN----LSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA 324
Query: 380 ASITKIKISPDKKVIVSVSADGGIFLW 406
I + ++ +V DG FL
Sbjct: 325 DQIWSVNFKGK-TLVAAVEKDGQSFLE 350
Score = 48.0 bits (112), Expect = 1e-06
Identities = 14/161 (8%), Positives = 41/161 (25%), Gaps = 2/161 (1%)
Query: 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
+ + + + + ++R + + + + +
Sbjct: 194 LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD 253
Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
+ + H+ ++A+ +L G E Q I+ L R
Sbjct: 254 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL-RS 312
Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
+ + + + + + + DG L L
Sbjct: 313 GKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEIL 352
Score = 44.9 bits (104), Expect = 1e-05
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD 390
+L G + + C+ F + Y +TG D++++++ GH + +K +
Sbjct: 7 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 391 KKVIVS 396
++
Sbjct: 65 GILVSG 70
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 68.7 bits (166), Expect = 3e-13
Identities = 45/356 (12%), Positives = 108/356 (30%), Gaps = 37/356 (10%)
Query: 176 YDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-----AHNRGVTALAITQ-------DGTR 223
+S DG+++ + + + H G+ + + Q +
Sbjct: 22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81
Query: 224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283
+ + G + +++TRE ++ + + +K S A+ +L +
Sbjct: 82 VATTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 139
Query: 284 KSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343
+T + A S + +++ T + + V
Sbjct: 140 VATDVKGTTYIWKFHPFAD---------ESNSLTLNWSPTLELQGTVESPMTPSQFATSV 190
Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVG------IGHAASITKIKISPDKKVIVSV 397
D + G TG + V++ P + I ++ SI +K SP ++
Sbjct: 191 DISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA 249
Query: 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI 457
T + + S + + L S +MS +++ S L
Sbjct: 250 HDSNSFGCITLY----ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305
Query: 458 TCSTNKMIDYWETCDGSIIRSLEG--SDV-AAVNCVDFVDDGKYFLTGGADQIVKI 510
+ + + +W+ I +L D+ + + + G G + +
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361
Score = 51.8 bits (122), Expect = 1e-07
Identities = 36/341 (10%), Positives = 93/341 (27%), Gaps = 73/341 (21%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRI---------------SVMN 166
H + ++ + AT S D+ + + +E ++ S
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-----------------LKFIIPNAHN 209
+ +++ G + P +
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 210 RGVTALAITQDGTRLLSGGGEGQVRI----WKLTRESQSLQCVLKEHTSSVSVIQIKSDS 265
+ T++ I++ G + +G G V+I + Q + +++S+ ++
Sbjct: 185 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243
Query: 266 KEAMSASTDG-----------------TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ 308
A + + L S +MS +++ S
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 303
Query: 309 LITCSTNKMIDYWETCDGSIIRSLEG--SDV-AAVNCVDFVDDGKYFLTGGADQIVKMWM 365
L + + + +W+ I +L D+ + + + G G + +
Sbjct: 304 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG---VFDVKF 360
Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
++G +G + + + V D I +
Sbjct: 361 LKKGWRSGMG------------ADLNESLCCVCLDRSIRWF 389
Score = 42.9 bits (99), Expect = 6e-05
Identities = 25/265 (9%), Positives = 55/265 (20%), Gaps = 64/265 (24%)
Query: 248 VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV 307
K H + + + + +S S DG +WD
Sbjct: 9 AGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDN------------------------- 41
Query: 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMY 366
+ + + V + ++ + T + +
Sbjct: 42 -----KLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRI 96
Query: 367 REGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKIS 426
I + + + A L L +
Sbjct: 97 TREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS------------HRLVATDV 144
Query: 427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA 486
+ T + S ++ + P+ T + +
Sbjct: 145 KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF------------------ 186
Query: 487 VNCVDFVDDGKYFLTGGADQIVKIC 511
VD + G TG + V+I
Sbjct: 187 ATSVDISERG-LIATGFNNGTVQIS 210
Score = 31.4 bits (69), Expect = 0.29
Identities = 19/166 (11%), Positives = 46/166 (27%), Gaps = 5/166 (3%)
Query: 80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
++ + + + + + + I + + + A F
Sbjct: 203 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 262
Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
+ + L + + F G+ + S DG +R + ++ +
Sbjct: 263 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 322
Query: 200 LKFIIPNAHNRGV----TALAITQDGTRLLSGGGEGQVRIWKLTRE 241
+ N H + LA+ + G L G + K R
Sbjct: 323 RITTL-NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 367
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 63.3 bits (152), Expect = 2e-11
Identities = 33/349 (9%), Positives = 84/349 (24%), Gaps = 32/349 (9%)
Query: 89 YNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148
++P++ + + F+ D++ + L + I ++ + F ++
Sbjct: 10 FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP---EPLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH 208
+ N+ + ND F +I +
Sbjct: 67 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126
Query: 209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-------QSLQCVLKEHTSSVSVIQI 261
+T I+ + + G ++ S
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAF 186
Query: 262 KSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-------- 313
+DSK S D + S P
Sbjct: 187 DADSKNLYYLSYRSLDPSPDR--VVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244
Query: 314 --------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365
+ + S + + + Y+ ++ +
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 304
Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD 414
+ ++T +++S D+K ++ DG I+ + + ED+
Sbjct: 305 VKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349
Score = 61.8 bits (148), Expect = 5e-11
Identities = 27/354 (7%), Positives = 71/354 (20%), Gaps = 46/354 (12%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
I F G+A + + ++ + + D G
Sbjct: 18 IAFVSRGQAFIQDVSGTYVLKVP-------------EPLRIRYVRRGGDTKVAFIHGTRE 64
Query: 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291
+ + + + + ++ ++ ++ + +I
Sbjct: 65 GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 124
Query: 292 ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI--------IRSLEGSDVAAVNCV 343
+MI + + K + +I ++ +
Sbjct: 125 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP 184
Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-------GHAASITKIKISPDKKVIVS 396
F D K + F + S K+ P +
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244
Query: 397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL 456
D + D GD R + S +
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI-------------YSVPVHGEFAAYY 291
Query: 457 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
++ ++ + + + D K + D +
Sbjct: 292 QGAPEKGVLLKYDVKTRKVTEVKNN-----LTDLRLSADRKTVMVRKDDGKIYT 340
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 62.3 bits (149), Expect = 3e-11
Identities = 51/308 (16%), Positives = 96/308 (31%), Gaps = 29/308 (9%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
HN+ +TAL+ + DG L S EG + W + S + H + ++ I+ S
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDI-STGISNRVFPDVHATMITGIKTTSKGDL 69
Query: 268 AMSASTDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324
+ D V+ + S + A + + Y
Sbjct: 70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129
Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
+ S S VA N FV G ++ + V I H A IT
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIVHPAEITS 184
Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
+ S + +V+ + ++ + + + +
Sbjct: 185 VAFSNNGAFLVATDQSRKVIPYSVA-----------------NNFELAHTNSWTFHTAKV 227
Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTG 502
++ P V+L T S + + W S I +++VN V + + ++
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSA 286
Query: 503 GADQIVKI 510
G D +K
Sbjct: 287 GQDSNIKF 294
Score = 56.1 bits (133), Expect = 3e-09
Identities = 37/298 (12%), Positives = 88/298 (29%), Gaps = 19/298 (6%)
Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
+ + DGK + S +G I + +G + P+ H +T + T L + +
Sbjct: 17 ALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK-GDLFTVSWD 75
Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290
+++ + SS + S + A+ ++ K T + I
Sbjct: 76 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 135
Query: 291 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK 350
S + + S + + + +++ +V +
Sbjct: 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLV 195
Query: 351 YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
+ E H A + + SPD + + S D + +W
Sbjct: 196 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW---- 251
Query: 411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW 468
++ I + A S +++ +E +++ + I +W
Sbjct: 252 ---NMNKPSDHPIIIKGAHAMS-----------SVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 43.4 bits (100), Expect = 3e-05
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK-FIIPNAHNRGVTALAITQDGTR 223
AC+ ++ D + +G D + + II AH I + T
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282
Query: 224 LLSGGGEGQVRIWKLT 239
++S G + ++ W +
Sbjct: 283 IVSAGQDSNIKFWNVP 298
Score = 42.3 bits (97), Expect = 9e-05
Identities = 16/118 (13%), Positives = 30/118 (25%)
Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
+ H V ++ + D RL
Sbjct: 180 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 239
Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
+G + V +W + + S + H S I + +SA D W++
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 38.0 bits (86), Expect = 0.002
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 377 GHAASITKIKISPDKKVIVSVSADGGIFLW 406
GH +IT + S D K + S A+G I W
Sbjct: 10 GHNKAITALSSSADGKTLFSADAEGHINSW 39
Score = 36.9 bits (83), Expect = 0.005
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
GSI + G + A+ + DGK + A+ +
Sbjct: 2 GSIDQVRYGHN-KAITALSSSADGKTLFSADAEGHINS 38
Score = 35.0 bits (78), Expect = 0.018
Identities = 9/69 (13%), Positives = 18/69 (26%)
Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 503
I + + L + I+ W+ G R + + G F
Sbjct: 15 ITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 74
Query: 504 ADQIVKICL 512
D + +
Sbjct: 75 DDHLKVVPA 83
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 61.3 bits (147), Expect = 7e-11
Identities = 39/347 (11%), Positives = 85/347 (24%), Gaps = 43/347 (12%)
Query: 174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGGEGQ 232
+ ++ + S + G + D G
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 233 VRIWKLTRESQ----SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL 288
+ L +L V E S+ I D KE + + +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 289 IIMILPSM-----IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343
+ + + + P +V L+ + + + Y D + G A+
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL-YVAGPDIYKMDVKTGKYTVALPLR 182
Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGI 403
++ G A ++ W ++ F + + DK+ + G
Sbjct: 183 NWNRKGYS-----APDVLYFWPHQSPRHEFSMLYT-----IARFKDDKQDPATADLLYGY 232
Query: 404 FLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK 463
T ++ L + + P + I N
Sbjct: 233 LSV-------------------DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN- 272
Query: 464 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
+ ++ +I++ CV F G GG + +
Sbjct: 273 RLAKYDLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAV 317
Score = 48.2 bits (113), Expect = 1e-06
Identities = 18/163 (11%), Positives = 40/163 (24%), Gaps = 3/163 (1%)
Query: 75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV 134
LY+ D ++ + + N + + F S +Y +
Sbjct: 158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 217
Query: 135 NFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193
+ AT ++T + + +
Sbjct: 218 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY 277
Query: 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236
+ KL H +A + G +L GG + ++
Sbjct: 278 DLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 47.8 bits (112), Expect = 2e-06
Identities = 38/315 (12%), Positives = 81/315 (25%), Gaps = 48/315 (15%)
Query: 72 VTALYLLKDDSGISSLQYNPVNNKVFV-GTVNCEIFLIDMNSGFTLTLVNTCHTSA---- 126
V ++ D G + P N +V +I+ ID+++ N
Sbjct: 30 VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 89
Query: 127 -------------IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMIC--AC 171
+Y P + + ++S E + M
Sbjct: 90 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYL 149
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
+ DG ++G + + T + + NR + S E
Sbjct: 150 MRAADDGSLYVAGPDIYKMDVKTGKY--TVALPLRNWNRKGYSAPDVLYFWPHQSPRHE- 206
Query: 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291
+ ++ + K D ++ +A + DL
Sbjct: 207 --------------------FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 246
Query: 292 IL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349
+ + P + I N + ++ +I++ CV F G
Sbjct: 247 FADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAANLDH--TYYCVAFDKKG 303
Query: 350 KYFLTGGADQIVKMW 364
GG + ++
Sbjct: 304 DKLYLGGTFNDLAVF 318
Score = 46.3 bits (108), Expect = 5e-06
Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Query: 90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR 149
+ +D+ +G T T T + + N +
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-IYGVLNRLA 275
Query: 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-LKFIIPNAH 208
+ ++ + ++ + C+ F G + G + F P + + +K I
Sbjct: 276 KYDLKQRKLIKAANLDHTYY-CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG 334
Query: 209 NRGVTALAI 217
+ T +
Sbjct: 335 DMSTTTPQV 343
Score = 44.0 bits (102), Expect = 3e-05
Identities = 16/219 (7%), Positives = 56/219 (25%), Gaps = 13/219 (5%)
Query: 64 DVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH 123
D + ++ D ++ P+ +V++ + L V T
Sbjct: 115 DHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGK 174
Query: 124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILS 183
+ P+ + + + + W ++ +M+ F D + +
Sbjct: 175 YTV----ALPLRNWNRKGYSAPDVLYFWPHQSPRH-----EFSMLYTIARFKDDKQDPAT 225
Query: 184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ 243
++GK + + G ++ + ++ +
Sbjct: 226 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYD-LKQRK 283
Query: 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
++ + + + T +++
Sbjct: 284 LIKAA--NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 320
Score = 41.3 bits (95), Expect = 2e-04
Identities = 23/232 (9%), Positives = 49/232 (21%), Gaps = 22/232 (9%)
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL-TGGADQ 359
A +I + + + ++ +S D D +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 360 IVKMW------MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED 413
+ V S+ ISPD K + + +
Sbjct: 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
Query: 414 --DVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 471
+V + T R + ++ + S ++ + T K
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR 182
Query: 472 DGS-------------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
+ + +S F DD + T
Sbjct: 183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 234
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 58.0 bits (138), Expect = 7e-10
Identities = 34/323 (10%), Positives = 89/323 (27%), Gaps = 28/323 (8%)
Query: 112 SGFTLTLVNTCHTSAIYDLQFPVNFS---SVFATCSKNDIRIWSVRTLNELLRISVM--- 165
S +L + S + +++ + A + + + + V
Sbjct: 1 SSISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG 60
Query: 166 --NMICACIVF--TYDGKAILSGWNDGFIRCFTPQSGKLKFII-------PNAHNRGVTA 214
+ + + F + + SG G + + K + ++
Sbjct: 61 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120
Query: 215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274
++ +G RL G ++ +S + + H+ ++ +K D
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180
Query: 275 GTCVLWDLIKSTRLIIMILPSM--------IMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
V++ + + + V + ++ +
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240
Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG--VPCFVGIGHAASITK 384
+ V D + F T GAD +++W V + +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300
Query: 385 IKISPDK-KVIVSVSADGGIFLW 406
+ + I+S+S DG + +
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFY 323
Score = 51.1 bits (120), Expect = 2e-07
Identities = 38/337 (11%), Positives = 78/337 (23%), Gaps = 39/337 (11%)
Query: 197 SGKLKFII---PNAHNRGVTALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEH 252
S LK II P+ T L+ + G+ VR H
Sbjct: 2 SISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH 61
Query: 253 -TSSVSVIQI--KSDSKEAMSASTDGT---------CVLWDLIKSTRLIIMILPSMIMSA 300
+S V+ ++ S+ S G + + + +L I
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 301 AYHPSEVQLITCSTNKM--IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358
++ +L + + G+ + + G C +T G D
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 359 QIVKMWM---YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDV 415
V + ++ + + ++ SPD V + +
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF- 240
Query: 416 GDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI 475
+ A + T + I W+
Sbjct: 241 ---------------LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC 285
Query: 476 IRSLEG-SDVAAVNCVDFV-DDGKYFLTGGADQIVKI 510
++ V V ++ D +
Sbjct: 286 VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322
Score = 43.0 bits (99), Expect = 5e-05
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Query: 219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK---SDSKEAMSASTDG 275
D + + G + +R+W + + + Q+ + + +S S DG
Sbjct: 261 LDSQKFATVGADATIRVWDV--TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318
Query: 276 TCVLWDL 282
T ++L
Sbjct: 319 TLNFYEL 325
Score = 35.7 bits (80), Expect = 0.012
Identities = 9/71 (12%), Positives = 18/71 (25%), Gaps = 5/71 (7%)
Query: 446 SAAYHPSEVQLITCSTNKMIDYW---ETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFL 500
+Y P+ + + G + V V F + +Y
Sbjct: 22 HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC 81
Query: 501 TGGADQIVKIC 511
+G V +
Sbjct: 82 SGDESGKVIVW 92
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 56.5 bits (135), Expect = 2e-09
Identities = 35/334 (10%), Positives = 79/334 (23%), Gaps = 60/334 (17%)
Query: 195 PQSGKLKFIIPNAHNRGV-------TALAITQDGTRLLSGGGEGQVRIWKL-TRESQSLQ 246
+ KL I G ++ T +R G V I T +
Sbjct: 5 ADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEI 64
Query: 247 CVLKEHTSSVSVIQIKSDSKEAM---SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH 303
+ +H V + S + A+ + + ++ ++ + + AY
Sbjct: 65 VIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYP 124
Query: 304 PSEVQLITCS-TNKMIDYWETCDGSIIR-SLEGSDVAAVNCVDFVDDGKY---FLTGGAD 358
+ + + K + +G + ++ + + FV+ +Y +L
Sbjct: 125 AGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYG 184
Query: 359 QIVKMWMYREGVPCFVGI--GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVG 416
V+ + P F + P +V A + + D
Sbjct: 185 GNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTD--- 241
Query: 417 DSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII 476
+ P + +K +
Sbjct: 242 -----------------------------GSHKDPGTQVWVYDLKSKQRVARWDLAQQKV 272
Query: 477 RSLEGSDVAAVNCVDFVDDGKYFL--TGGADQIV 508
L + +D K +V
Sbjct: 273 EPLVS--------IQVSEDDKPLFYGLTATSDLV 298
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 55.2 bits (131), Expect = 7e-09
Identities = 29/332 (8%), Positives = 73/332 (21%), Gaps = 32/332 (9%)
Query: 181 ILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKL 238
IL+ + + + +I + G + + L
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM 298
+S + + S + S DG +
Sbjct: 64 VTGETL-------GRIDLSTPEERVKSLFGAALSPDGKTLAI------------------ 98
Query: 299 SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358
+ ++ S ++ E + + + DG G D
Sbjct: 99 -YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGLGRD 155
Query: 359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDS 418
V V A S +T + D +
Sbjct: 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215
Query: 419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS 478
+ ++ + + + + + + +++ ++ + I+
Sbjct: 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR 275
Query: 479 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
+ + V+ DG GGA +
Sbjct: 276 VPLPH--SYYSVNVSTDGSTVWLGGALGDLAA 305
Score = 45.6 bits (106), Expect = 9e-06
Identities = 23/306 (7%), Positives = 69/306 (22%), Gaps = 42/306 (13%)
Query: 140 FATCSK-NDIRIWSVRTLNELLRISVMNMIC--ACIVFTYDGK-AILSGWNDGFIRCFTP 195
++ + + + + I++ + + G+ A + +
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 196 QSGKLKFII----PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV--- 248
+G+ I P + + A++ DG L ++ + + +
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 249 ------LKEHTSSVSVIQIKSDSKEAMSASTD----------------------GTCVLW 280
E ++++ D + D T
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183
Query: 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV 340
D++ + + + G +
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243
Query: 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD 400
GA +++ + + + S + +S D + A
Sbjct: 244 FSTAVNPAKTR--AFGAYNVLESFDLEKNASIKR-VPLPHSYYSVNVSTDGSTVWLGGAL 300
Query: 401 GGIFLW 406
G + +
Sbjct: 301 GDLAAY 306
Score = 44.8 bits (104), Expect = 1e-05
Identities = 18/169 (10%), Positives = 46/169 (27%), Gaps = 4/169 (2%)
Query: 68 YSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI 127
++ + LY L D + + + + + E + + A
Sbjct: 142 WARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES-SGVMAT 200
Query: 128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND 187
+ T + + + T E+ V M + +
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGAY 259
Query: 188 GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236
+ F + +P ++ ++ DG+ + GG G + +
Sbjct: 260 NVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 33.6 bits (75), Expect = 0.049
Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV 153
K + D+ ++ V H+ Y + + S+V+ + D+ +
Sbjct: 251 AKTRAFGAYNVLESFDLEKNASIKRVPLPHS--YYSVNVSTDGSTVWLGGALGDLAAYDA 308
Query: 154 RTLNELLRISV 164
TL + ++ +
Sbjct: 309 ETLEKKGQVDL 319
Score = 30.5 bits (67), Expect = 0.51
Identities = 12/189 (6%), Positives = 37/189 (19%), Gaps = 10/189 (5%)
Query: 99 GTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE 158
+ + + DL + +
Sbjct: 125 LSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184
Query: 159 LLRISVMNMICACI-----VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVT 213
+L + + + D + ++G++ +
Sbjct: 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF 244
Query: 214 ALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST 273
+ A+ TR + + + + S + + +D
Sbjct: 245 STAVNPAKTRAFGAYNVLESFDLEKNASIKRV-----PLPHSYYSVNVSTDGSTVWLGGA 299
Query: 274 DGTCVLWDL 282
G +D
Sbjct: 300 LGDLAAYDA 308
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 52.7 bits (124), Expect = 3e-08
Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 31/304 (10%)
Query: 207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK 266
HN+G+TAL + L+SG +G++ W S + ++H++ + + +
Sbjct: 11 GHNKGITALTVN----PLISGSYDGRIMEW-------SSSSMHQDHSNLIVSLDNSKAQE 59
Query: 267 EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
+ D +K + S A+ + + + + ++
Sbjct: 60 YSS-------ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
I S +AV+ + I + V + A + I
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEG---NTIQVFKLSDLEVSFDLKTPLRAKPSYIS 169
Query: 387 ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS 446
ISP + I + G I L+ E + S I P+ +
Sbjct: 170 ISPSETYIAAGDVMGKILLYDLQSREVK---------TSRWAFRTSKINAISWKPAEKGA 220
Query: 447 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 506
E + T S + I + I + VN + + ++ GAD
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA 279
Query: 507 IVKI 510
+K
Sbjct: 280 CIKR 283
Score = 52.7 bits (124), Expect = 4e-08
Identities = 31/287 (10%), Positives = 69/287 (24%), Gaps = 15/287 (5%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
H I L + + S I WS ++++ ++ + + +
Sbjct: 12 HNKGITALTV-----NPLISGSYDGRIMEWSSSSMHQDHSNLIV-----SLDNSKAQEYS 61
Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
W+D + + N +T D L+ G +
Sbjct: 62 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121
Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA 301
S + + + + + K + + I + I +
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
+ S W I + + TG D +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPA--EKGANEEEIEEDLVATGSLDTNI 239
Query: 362 KMWMYREGVPCFVGI-GHAASITKIKISPDKKVIVSVSADGGIFLWT 407
++ + + + H + + +VS AD I W
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 50.0 bits (117), Expect = 2e-07
Identities = 19/150 (12%), Positives = 43/150 (28%), Gaps = 1/150 (0%)
Query: 88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKND 147
+VF + F + + ++ + + ++ S+
Sbjct: 137 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 196
Query: 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA 207
+++ IS + + +G D I ++ + NA
Sbjct: 197 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA 256
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
H GV L L+S G + ++ W
Sbjct: 257 HKDGVNNLLWETPS-TLVSSGADACIKRWN 285
Score = 45.3 bits (105), Expect = 8e-06
Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 2/122 (1%)
Query: 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG 221
IS+ GK +L ++ K + A +
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227
Query: 222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281
+ +G + + I+ + + + L H V+ + ++ S S+ D W+
Sbjct: 228 DLVATGSLDTNIFIYSV-KRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACIKRWN 285
Query: 282 LI 283
++
Sbjct: 286 VV 287
Score = 42.6 bits (98), Expect = 6e-05
Identities = 39/296 (13%), Positives = 76/296 (25%), Gaps = 36/296 (12%)
Query: 81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
+ GI++L NP+ G+ + I +S H++ I L
Sbjct: 13 NKGITALTVNPL----ISGSYDGRIMEWSSSSMHQ------DHSNLIVSLDNSKAQEYSS 62
Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
+ DG + +D + + +
Sbjct: 63 ISWDDTLKVNGI--------TKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
K + N+ A++ + G EG + + + + S I
Sbjct: 115 KSVRLNSP-----GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYIS 169
Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM------------SAAYHPSEVQ 308
I + G +L+DL + E
Sbjct: 170 ISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229
Query: 309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
+ T S + I + I + VN + + ++ GAD +K W
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 284
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 46.9 bits (110), Expect = 4e-06
Identities = 40/326 (12%), Positives = 86/326 (26%), Gaps = 21/326 (6%)
Query: 172 IVFTYDGKAIL--SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
+ D + + + G I S K+ +I V ++ G LL G
Sbjct: 24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID--TGYAVHISRMSASGRYLLVIGR 81
Query: 230 EGQVRIW-KLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST 286
+ ++ + +E + + E S S + + ++ + ++
Sbjct: 82 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141
Query: 287 RL--IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD 344
I+ + + YHP ++++ ++ + L V
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Query: 345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA----- 399
+ + GG D + +M V + + + K
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261
Query: 400 DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC 459
+W+ L D K A + + HP L
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV- 320
Query: 460 STNKMIDYWETCDGSIIRSLEGSDVA 485
D D I +S+ D+
Sbjct: 321 ------DTTFNPDARISQSVAVFDLK 340
Score = 28.0 bits (61), Expect = 3.2
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 507
+ +T I + I++ ++ AV+ G+Y L G D
Sbjct: 27 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDAR 84
Query: 508 VKI 510
+ +
Sbjct: 85 IDM 87
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 39.1 bits (91), Expect = 0.001
Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 65/311 (20%)
Query: 146 NDIRIWSVRTLNELLRISVMNMICA------------------------------CIVFT 175
++R+ V ++ EL+RI V N+ A
Sbjct: 21 GEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGR 80
Query: 176 YDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234
YDGK ++ + + K I + + + L + +
Sbjct: 81 YDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNY--------- 131
Query: 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP 294
V + D + ++ D +I+
Sbjct: 132 -------------VFCNAEFVIPQPN---DGTDFSLDNSYTMFTAIDAETMDVAWQVIVD 175
Query: 295 SMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL 353
+ + + + TC ++ + + +V V G +
Sbjct: 176 GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVER--IAAAVKAGNFKT 233
Query: 354 TGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD-KKVIVSVSADGGIFLW---TFP 409
G + V ++ + + SPD K I + + +
Sbjct: 234 IGDSKVPVVDGRGESEFTRYIPVPKNPH--GLNTSPDGKYFIANGKLSPTVSVIAIDKLD 291
Query: 410 ELEDDVGDSRS 420
+L +D + R
Sbjct: 292 DLFEDKIELRD 302
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 34.8 bits (78), Expect = 0.022
Identities = 14/187 (7%), Positives = 43/187 (22%), Gaps = 6/187 (3%)
Query: 183 SGWNDGFIRCFT-PQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKL-T 239
+ I + G L V + ++ D L E +V +++
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMS 299
+ S++ I + S + V + + ++
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT---RLEDGLPVGVVDVVE 125
Query: 300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359
+ + + + + + + A + +
Sbjct: 126 GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 185
Query: 360 IVKMWMY 366
+ + Y
Sbjct: 186 PNEQYAY 192
Score = 29.0 bits (63), Expect = 1.3
Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 352 FLTGGADQIVKMW-MYREGVPCFVG-IGHAASITKIKISPDKKVI-VSVSADGGIFLWTF 408
++ Q + +W + EG + + + +SPDK+ + V V + + +
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 34.4 bits (78), Expect = 0.027
Identities = 43/354 (12%), Positives = 97/354 (27%), Gaps = 62/354 (17%)
Query: 104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLR 161
+I LID ++ T+++T A++ + + +F + + + +
Sbjct: 43 QIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE 100
Query: 162 ISVMN---MICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPN----------A 207
I + + I + ++ K AI + ++ + K I
Sbjct: 101 IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 160
Query: 208 HNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK 266
V A+ + + + G++ + T +L+ + + +
Sbjct: 161 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL-NNLKTTEISAERFLHDGGLDGSHR 219
Query: 267 EAMSASTDGTCVLWDLIKSTRLIIMIL--------------------PSMIMSAAYHPSE 306
++A+ ++ K +L+ + P S S
Sbjct: 220 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV 279
Query: 307 VQLITCSTNKMIDYWETCD-----GSIIRSLEGSD-------------VAAVNCVDFVDD 348
+ T + W+ D G ++ A ++ V D
Sbjct: 280 ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 339
Query: 349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD-KKVIVSVSADG 401
K G+D K E G + D +V SV
Sbjct: 340 IKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE---FNKDGTEVWFSVWNGK 390
Score = 32.5 bits (73), Expect = 0.14
Identities = 17/210 (8%), Positives = 46/210 (21%), Gaps = 42/210 (20%)
Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
K + + ++ GQ+ + + ++ VL +V +
Sbjct: 11 WKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDG--STYEIKTVLDTG-YAVHIS 67
Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
++ + + DG + DL + + +
Sbjct: 68 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK-----IGSEARSI------------ 110
Query: 320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY-FLTGGADQIVKMWMYREGVPCFVGIGH 378
+ KY + P +
Sbjct: 111 --------------------ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 150
Query: 379 AASITKIKISPDKKVI-VSVSADGGIFLWT 407
+ + + P+ +V + S F+
Sbjct: 151 GMTYDEQEYHPEPRVAAILASHYRPEFIVN 180
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 33.5 bits (75), Expect = 0.055
Identities = 8/74 (10%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 165 MNMICACIVFTYDGKAILS-GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR 223
+ + +G+ +++ N+ + FT + + + +A+ DG
Sbjct: 198 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDG-S 256
Query: 224 LLSGGGEGQVRIWK 237
++ + ++ I++
Sbjct: 257 VVLASKDYRLYIYR 270
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 31.9 bits (71), Expect = 0.15
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
+ F D +++ W I F P G+ K I + L +
Sbjct: 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTI 282
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 32.0 bits (71), Expect = 0.18
Identities = 37/255 (14%), Positives = 84/255 (32%), Gaps = 26/255 (10%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL--SGGG 229
+ F G+ L +G I P++ ++K + A+ I +DG + G
Sbjct: 45 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA-NPAAIKIHKDGRLFVCYLGDF 103
Query: 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG----------TCVL 279
+ I+ T +LQ ++++ +++ + + DSK + V
Sbjct: 104 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 163
Query: 280 WDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA 339
D T +I I + ++ + + + + N++ DG I+ +
Sbjct: 164 PDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY 223
Query: 340 ------VNCVDFVDDGKYFLTGGADQIVKMW------MYREGVPCFVGIGHAASITKIKI 387
+ D ++ V ++ + + +P GH T +
Sbjct: 224 FTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIP-GRDEGHMLRSTHPQF 282
Query: 388 SPDKKVIVSVSADGG 402
P ++ S D
Sbjct: 283 IPGTNQLIICSNDIE 297
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 31.2 bits (69), Expect = 0.27
Identities = 34/252 (13%), Positives = 74/252 (29%), Gaps = 18/252 (7%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
+ DG ++ G I TP G + V+ LA T +G + +G
Sbjct: 33 LASAPDGTIFVTNHEVGEIVSITPD-GNQQIHATVEG--KVSGLAFTSNGDLVATGWNAD 89
Query: 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291
+ + L + + L ++ + I S + +W + +
Sbjct: 90 SIPVVSLVKSDGT-VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 148
Query: 292 ILPSMIMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349
L +++ + S + T ++R + G
Sbjct: 149 WLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLR---------IPVDSTDKPG 199
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
+ + I EG + + ++I+PD+ + A+ G+ T
Sbjct: 200 EPEIFVEQTNIDDFAFDVEGNLYGATHIYNSV---VRIAPDRSTTIIAQAEQGVIGSTAV 256
Query: 410 ELEDDVGDSRSL 421
GD ++
Sbjct: 257 AFGQTEGDCTAI 268
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 30.5 bits (67), Expect = 0.53
Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%)
Query: 147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN 206
++ + + + TY GK + G + + +
Sbjct: 185 HTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 244
Query: 207 AHNRG-VTALAITQDGTRLLSGGGEGQV--------RIWKLTRESQSLQCVLKEHTSSVS 257
G +A + R+ + + L ++ E +
Sbjct: 245 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-EMGHEID 303
Query: 258 VIQIKSDSKEAM--SASTDGTCVLWDL 282
I + D K + ++ D T + D
Sbjct: 304 SINVSQDEKPLLYALSTGDKTLYIHDA 330
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase,
N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Length = 560
Score = 30.3 bits (67), Expect = 0.66
Identities = 20/142 (14%), Positives = 38/142 (26%), Gaps = 19/142 (13%)
Query: 83 GISSLQYNP--VNNKVFVGTVNCEIFLIDMNSG---------------FTLTLVNTCHTS 125
L+ P + ++ + +D SG T
Sbjct: 54 NTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGV 113
Query: 126 AIYD--LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILS 183
A++ + + A +K IWS +T + S+ G
Sbjct: 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAE 173
Query: 184 GWNDGFIRCFTPQSGKLKFIIP 205
GF+ + +GKL +
Sbjct: 174 YGVRGFVSAYDADTGKLAWRFY 195
>d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 371
Score = 28.7 bits (64), Expect = 1.8
Identities = 23/134 (17%), Positives = 37/134 (27%), Gaps = 21/134 (15%)
Query: 345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI---TKIKISPDKKVIVSVSADG 401
++D TG Y G G+ + TK I DK + D
Sbjct: 227 YIDHTNVAYTGA---------Y--GNVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDK 275
Query: 402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST 461
D+ RS ISR+ + + +L + A E + S
Sbjct: 276 SFAPLLVNGELMDMSRGRS----ISRANSEGHVAAVEVLRGIHRIADMSEGETKQRLQS- 330
Query: 462 NKMIDYWETCDGSI 475
++ D
Sbjct: 331 --LVKTIVQSDSYY 342
>d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus
agalactiae [TaxId: 1311]}
Length = 371
Score = 28.0 bits (62), Expect = 2.9
Identities = 28/134 (20%), Positives = 37/134 (27%), Gaps = 15/134 (11%)
Query: 345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI---TKIKISPDKKVIVSVSADG 401
F DG Y Y G G+ I T KIS + +V +
Sbjct: 222 FYADGSYIDHTNVAY---TGAY--GNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQ 276
Query: 402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST 461
D+ RS ISR A S + +L + A E L S
Sbjct: 277 SFLPLIVKGELMDMSRGRS----ISREAASSHAAAVEVLRGFLRLANMSNEERNLDLKS- 331
Query: 462 NKMIDYWETCDGSI 475
I T +
Sbjct: 332 --TIKTIITSNKFY 343
>d3bzna1 d.161.1.1 (A:2-429) Menaquinone-specific isochorismate
synthase MenF {Escherichia coli [TaxId: 562]}
Length = 428
Score = 27.4 bits (60), Expect = 4.5
Identities = 17/114 (14%), Positives = 29/114 (25%), Gaps = 11/114 (9%)
Query: 364 WMYREGVPCFVGIGHAASITKI----------KISPDKKVIVSVSADGGIFLWTFPELE- 412
W R G V +G T + D ++ + D P LE
Sbjct: 54 WQQRNGDEEAVVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEW 113
Query: 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 466
G +L + ++ I + + + L T D
Sbjct: 114 RRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPD 167
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.403
Gapped
Lambda K H
0.267 0.0499 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,890,884
Number of extensions: 85688
Number of successful extensions: 625
Number of sequences better than 10.0: 1
Number of HSP's gapped: 360
Number of HSP's successfully gapped: 129
Length of query: 515
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 426
Effective length of database: 1,185,626
Effective search space: 505076676
Effective search space used: 505076676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.5 bits)