BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17618
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53677|AP3M2_HUMAN AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1
Length = 418
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 3 SVYVSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCC 62
S V LP+GQLS VPWRRTGVKYTNNEAYFDVIEE+DAIIDK+GSTI +EIQG ID C
Sbjct: 150 STNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDAC 209
Query: 63 IKLSGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGS 122
+KL+GMPDLTLSFMNPRL DDVSFHPCVRFKRWE+ERILSFIPPDGNFRL+SYH VS
Sbjct: 210 VKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYH--VSAQ 267
Query: 123 N 123
N
Sbjct: 268 N 268
>sp|P53678|AP3M2_RAT AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1
Length = 418
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 3 SVYVSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCC 62
S V LP+GQLS VPWRRTGVKYTNNEAYFDV+EE+DAIIDK+GST+ +EIQG ID C
Sbjct: 150 STNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDAC 209
Query: 63 IKLSGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGS 122
+KL+GMPDLTLSFMNPRL DDVSFHPCVRFKRWE+ERILSFIPPDGNFRL+SYH VS
Sbjct: 210 VKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYH--VSAQ 267
Query: 123 N 123
N
Sbjct: 268 N 268
>sp|Q8R2R9|AP3M2_MOUSE AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1
Length = 418
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 107/121 (88%), Gaps = 2/121 (1%)
Query: 3 SVYVSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCC 62
S V LP+GQLS VPWRRTGVKYTNNEAYFDV+EE+DAIIDK+GST+ +EIQG ID C
Sbjct: 150 STNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDAC 209
Query: 63 IKLSGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGS 122
+KL+GMPDLTLSFMNPRL DDVSFHPCVRFKRWE+ERILSFIPPDGNFRL++YH VS
Sbjct: 210 VKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLAYH--VSAQ 267
Query: 123 N 123
N
Sbjct: 268 N 268
>sp|Q5ZMP7|AP3M1_CHICK AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1
Length = 418
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/118 (80%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDVIEE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVIEEIDAIIDKSGSTVFAEIQGVIDSCIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|Q5R478|AP3M1_PONAB AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1
Length = 418
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV+EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|Q9Y2T2|AP3M1_HUMAN AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1
Length = 418
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV+EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|P53676|AP3M1_RAT AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1
Length = 418
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV+EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|Q9JKC8|AP3M1_MOUSE AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1
Length = 418
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV+EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|Q24K11|AP3M1_BOVIN AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1
Length = 418
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 107/118 (90%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV+EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDL+LSFMNPRL DDVSFHPC+RFKRWE+ER+LSFIPPDGNFRL+SY RVS N
Sbjct: 213 SGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISY--RVSSQN 268
>sp|P47795|AP1M_DIPOM AP-1 complex subunit mu OS=Diplobatis ommata PE=2 SV=1
Length = 418
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 91/112 (81%), Positives = 102/112 (91%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
V LP+GQLS++PWRR GVKYTNNEAYFDV EE+DAIIDK+GST+F+EIQG ID CIKL
Sbjct: 153 VGDQLPTGQLSNIPWRRVGVKYTNNEAYFDVTEEIDAIIDKSGSTVFAEIQGVIDACIKL 212
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHT 117
+GMPDLTLSF+NPRL DDVSFHPCVRFKRWE+ER+LSFIPP GNFRLMSYH
Sbjct: 213 TGMPDLTLSFLNPRLLDDVSFHPCVRFKRWESERVLSFIPPVGNFRLMSYHV 264
>sp|Q9GPF1|AP3M_DICDI AP-3 complex subunit mu OS=Dictyostelium discoideum GN=apm3 PE=2
SV=1
Length = 421
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Query: 6 VSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKL 65
++ ILP+G L ++ WR+TG+KYT N+ +FD+IEE+D IID G + SEI G I C L
Sbjct: 155 ITDILPNGSLGAIQWRKTGIKYTQNKIFFDIIEEIDCIIDSNGYIVSSEINGEILCHCNL 214
Query: 66 SGMPDLTLSFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSN 123
SGMPDLT++F NPR+ DDVSFHPCVR+ RWE +R+LSFIPPDGNF+L+SY RV G N
Sbjct: 215 SGMPDLTMTFNNPRMLDDVSFHPCVRYSRWENDRVLSFIPPDGNFKLLSY--RVKGIN 270
>sp|Q54HS9|AP1M_DICDI AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1
SV=1
Length = 428
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 16/123 (13%)
Query: 9 ILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGM 68
+LP+ +V WR+ G+KY NE + DV+E ++ ++ G+ + SEI G + KLSGM
Sbjct: 149 VLPAAITGAVSWRKEGIKYNKNEVFLDVVESINLLVSANGTVLRSEIVGAVKMKSKLSGM 208
Query: 69 PDLTLSFMNPRLF----------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRL 112
P+L L + LF +DV FH CVR ++E +R +SFIPPDG F L
Sbjct: 209 PELRLGLNDKILFENSAKTGAPKGKGVELEDVKFHQCVRLSKFENDRTISFIPPDGEFEL 268
Query: 113 MSY 115
MSY
Sbjct: 269 MSY 271
>sp|Q9Y6Q5|AP1M2_HUMAN AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4
Length = 423
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 13/119 (10%)
Query: 10 LPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMP 69
+P ++V WR G+KY NE + DVIE V+ +++ GS + SEI G I + LSGMP
Sbjct: 149 VPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMP 208
Query: 70 DLTLSFMNPRLF-------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
+L L + LF +DV FH CVR R++ +R +SFIPPDG+F LMSY
Sbjct: 209 ELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSY 267
>sp|Q3SYW1|AP1M2_BOVIN AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3
Length = 423
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 13/119 (10%)
Query: 10 LPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMP 69
+P ++V WR G+KY NE + DVIE V+ +++ GS + SEI G I + LSGMP
Sbjct: 149 VPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGSIKLKVFLSGMP 208
Query: 70 DLTLSFMNPRLF-------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
+L L + LF +DV FH CVR R++ +R +SFIPPDG+F LMSY
Sbjct: 209 ELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSY 267
>sp|Q9WVP1|AP1M2_MOUSE AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3
Length = 423
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 13/119 (10%)
Query: 10 LPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMP 69
+P ++V WR G+KY NE + DVIE V+ +++ GS + SEI G I + LSGMP
Sbjct: 149 VPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMP 208
Query: 70 DLTLSFMNPRLF-------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
+L L + LF +DV FH CVR R++ +R +SFIPPDG+F LMSY
Sbjct: 209 ELRLGLNDRVLFELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSY 267
>sp|P35585|AP1M1_MOUSE AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3
Length = 423
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P+ ++V WR G+KY NE + DVIE V+ ++ G+ + SEI G I + LSGMP+
Sbjct: 150 PATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
Query: 71 LTLSFMNPRLFD-------------DVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
L L + LFD DV FH CVR R+E +R +SFIPPDG F LMSY
Sbjct: 210 LRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSY 267
>sp|Q32Q06|AP1M1_RAT AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3
Length = 423
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P+ ++V WR G+KY NE + DVIE V+ ++ G+ + SEI G I + LSGMP+
Sbjct: 150 PATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
Query: 71 LTLSFMNPRLFD-------------DVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
L L + LFD DV FH CVR R+E +R +SFIPPDG F LMSY
Sbjct: 210 LRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSY 267
>sp|Q9BXS5|AP1M1_HUMAN AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3
Length = 423
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P+ ++V WR G+KY NE + DVIE V+ ++ G+ + SEI G I + LSGMP+
Sbjct: 150 PATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
Query: 71 LTLSFMNPRLFD-------------DVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
L L + LFD DV FH CVR R+E +R +SFIPPDG F LMSY
Sbjct: 210 LRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSY 267
>sp|Q2KJ81|AP1M1_BOVIN AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3
Length = 423
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P+ ++V WR G+KY NE + DVIE V+ ++ G+ + SEI G I + LSGMP+
Sbjct: 150 PATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPE 209
Query: 71 LTLSFMNPRLFD-------------DVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
L L + LFD DV FH CVR R+E +R +SFIPPDG F LMSY
Sbjct: 210 LRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSY 267
>sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101
PE=2 SV=2
Length = 422
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 13/118 (11%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P ++V WR G+KY NE + DVIE V+ + G+ + SEI G + + L+GMP+
Sbjct: 149 PMAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMPE 208
Query: 71 LTLSFMNPRLF-------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
L L + LF +DV FH CVR R++ +R +SFIPPDG F LMSY
Sbjct: 209 LRLGLNDKVLFEGSGRGKSKSVELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSY 266
>sp|Q9HFE5|AP1M1_SCHPO AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apm1 PE=1 SV=1
Length = 426
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P +++ WR G+ Y NE + DVIE V+ I G+ I SEI G + LSGMP+
Sbjct: 149 PIAMTNAISWRSEGIHYRKNEVFLDVIESVNLIAAADGTVIQSEILGKVRLKCYLSGMPE 208
Query: 71 LTLSFMNPRLF--------------DDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYH 116
L L + LF +DV FH CVR R+E +R +SFIPPDG F LMSY
Sbjct: 209 LRLGLNDKVLFEAAGRTIKGNTVEMEDVKFHQCVRLARFENDRTISFIPPDGEFDLMSYR 268
Query: 117 TRVSGSNGGRPN--ASCPSFHRMVTSASCLTIRIRKVKKDKNRSIS 160
S+ RP C S +V S S + ++ + K R I+
Sbjct: 269 M----SSNVRPLIWVECES---IVHSGSRIEFMVKAKAQFKKRCIA 307
>sp|Q00776|AP1M1_YEAST AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APM1 PE=1 SV=2
Length = 475
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 45/150 (30%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P +SV WR G+ + NEA+ D++E ++ ++ + G + SEI G + KLSGMPD
Sbjct: 157 PVALTNSVSWRPEGITHKKNEAFLDIVESINMLMTQKGQVLRSEIIGDVKVNSKLSGMPD 216
Query: 71 LTLSFMNPRLF---------------------------------------------DDVS 85
L L + +F +D+
Sbjct: 217 LKLGINDKGIFSKYLDDDTNIPSASATTSDNNTETDKKPSITSSSATNKKKVNIELEDLK 276
Query: 86 FHPCVRFKRWEAERILSFIPPDGNFRLMSY 115
FH CVR ++E E+I++FIPPDG F LM+Y
Sbjct: 277 FHQCVRLSKFENEKIITFIPPDGKFDLMNY 306
>sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1
Length = 433
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 146 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 205
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 206 GMPECKFG-MNDKIVIEKQGKGTADETGKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 264
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 265 PPDGEFELMRYRT 277
>sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|P84091|AP2M1_MOUSE AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|Q96CW1|AP2M1_HUMAN AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=1 SV=1
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETGKTGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|Q09718|AP2M_SCHPO AP-2 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=apm4 PE=1 SV=1
Length = 446
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 17 SVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSF- 75
SVPWRR G+KY N Y D++E ++ +I TG+ + S++ G + LSGMP+
Sbjct: 165 SVPWRRAGIKYRKNSIYIDIVERMNLLISSTGNVLRSDVSGVVKMRAMLSGMPECQFGLN 224
Query: 76 -------------------MNPR-------LFDDVSFHPCVRFKRWEAERILSFIPPDGN 109
NP + +D FH CVR +E E ++FIPPDG
Sbjct: 225 DKLDFKLKQSESKSKSNNSRNPSSVNGGFVILEDCQFHQCVRLPEFENEHRITFIPPDGE 284
Query: 110 FRLMSYHTR 118
LMSY +
Sbjct: 285 VELMSYRSH 293
>sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1
Length = 435
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR ++++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETGKTGKQSIAIDDCTFHQCVRLSKFDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG + LM Y T
Sbjct: 267 PPDGEYELMRYRT 279
>sp|Q6NWK2|AP2MA_DANRE AP-2 complex subunit mu-A OS=Danio rerio GN=ap2m1a PE=2 SV=1
Length = 436
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL-----------------------FDDVSFHPCVRFKRWEAERILSF 103
GMP+ MN ++ DD +FH CVR ++++ER +SF
Sbjct: 208 GMPECKFG-MNDKIVIDKQGKGGTTDDAGKSGKQSIAIDDCTFHQCVRLSKFDSERSISF 266
Query: 104 IPPDGNFRLMSYHT 117
IPPDG + LM Y T
Sbjct: 267 IPPDGEYELMRYRT 280
>sp|Q7ZW98|AP2MB_DANRE AP-2 complex subunit mu-B OS=Danio rerio GN=ap2m1b PE=2 SV=1
Length = 436
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL-----------------------FDDVSFHPCVRFKRWEAERILSF 103
GMP+ MN ++ DD +FH CVR ++++ER +SF
Sbjct: 208 GMPECKFG-MNDKIVIDKQGKGGTTDDTGKSGKQSIAIDDCTFHQCVRLSKFDSERSISF 266
Query: 104 IPPDGNFRLMSYHT 117
IPPDG + LM Y T
Sbjct: 267 IPPDGEYELMRYRT 280
>sp|Q5NVF7|AP2M1_PONAB AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1
Length = 435
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DV+E V+ ++ G + + + G + LS
Sbjct: 148 QSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLS 207
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ MN ++ DD +FH CVR + ++ER +SFI
Sbjct: 208 GMPECKFG-MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKSDSERSISFI 266
Query: 105 PPDGNFRLMSYHT 117
PPDG F LM Y T
Sbjct: 267 PPDGEFELMRYRT 279
>sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2
SV=2
Length = 439
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 26/126 (20%)
Query: 17 SVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFM 76
+ PWR +KY NE Y DV+E V+ ++ G+ + +++ G + LSGMP+ M
Sbjct: 160 TTPWRTPDIKYKRNELYIDVVESVNLLMSAEGNILRADVSGQVMMKCFLSGMPECKFG-M 218
Query: 77 NPRLF-------------------------DDVSFHPCVRFKRWEAERILSFIPPDGNFR 111
N ++ DD++FH CVR +++++R +SFIPPDG F
Sbjct: 219 NDKVIMDREKSTNGGSAARSGARRANGIEIDDITFHQCVRLGKFDSDRTVSFIPPDGEFE 278
Query: 112 LMSYHT 117
LM Y T
Sbjct: 279 LMRYRT 284
>sp|P35603|AP2M_CAEEL AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2
SV=2
Length = 441
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 7 SSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLS 66
S + S + WRR G+KY NE + DVIE V+ ++++ G + + + G + LS
Sbjct: 152 QSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHVAGKVAMKSYLS 211
Query: 67 GMPDLTLSFMNPRL----------------------FDDVSFHPCVRFKRWEAERILSFI 104
GMP+ +N ++ DD FH CV+ ++E E +SFI
Sbjct: 212 GMPECKFG-INDKITIEGKSKPGSDDPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFI 270
Query: 105 PPDGNFRLMSYHT 117
PPDG + LM Y T
Sbjct: 271 PPDGEYELMRYRT 283
>sp|O94669|AP3M_SCHPO AP-3 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=apm3 PE=3 SV=1
Length = 425
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 11 PSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPD 70
P+ +VPWR KY NE + V+E V A+ G F ++ ++C ++SGMP
Sbjct: 157 PTLARDTVPWRTAKAKYATNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPL 216
Query: 71 LTLSFMNPRLFDDVSFHPCVRFKRWEAE-RILSFIPPDGNFRLMSYHT 117
L LS +V FH V KRW+ + FIPPDG F L S+ T
Sbjct: 217 LLLSLRPGTKLGNVRFHQSVNLKRWKQHPDQIEFIPPDGKFTLASFQT 264
>sp|Q750L8|AP3M_ASHGO AP-3 complex subunit mu OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=APM3 PE=3 SV=2
Length = 451
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 12 SGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGST---IFSEIQGYIDCCIKLSGM 68
+GQ +VPWR +Y NNE Y D++E V+A + + GS+ I + G ID LSG
Sbjct: 176 AGQ--TVPWRTADCRYVNNEIYVDLVETVNATLRQKGSSLTLINGSLSGKIDVKCYLSGN 233
Query: 69 PDLTLSF-MNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSG 121
P + L + D+ + H CV ++F+PPDG F L Y +S
Sbjct: 234 PTVQLKLRTSGHPLDNSALHRCVELGE-AGVATMNFVPPDGRFTLAEYAIDLSA 286
>sp|P38700|APM2_YEAST Adaptin medium chain homolog APM2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APM2 PE=1 SV=1
Length = 605
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 26/141 (18%)
Query: 4 VYVSSILPSGQLSSVPWRRTGVKYTNNEAYFDVIEEVDAIID-KTGSTIFSEIQGYIDCC 62
+Y++ + + + WR G+ Y NE + DVIE V ++D + G + I G I C
Sbjct: 244 LYINGDIAKTIIMPISWRTKGIHYAKNEFFLDVIERVQYLMDFEKGVIRKNLIHGEIVCR 303
Query: 63 IKLSGMPDLTLSF-----MNPRLFDDVSFHPCVRFKRWEA-------------------- 97
LSGMP L +S +P+ + SFH CV
Sbjct: 304 CYLSGMPKLKISINKILNRDPQFMSNSSFHQCVSLDSINTIEKDEEKNSDDDAGLQAATD 363
Query: 98 ERILSFIPPDGNFRLMSYHTR 118
R + FIPPDG F L Y +
Sbjct: 364 AREIEFIPPDGEFVLCQYELK 384
>sp|Q99186|AP2M_YEAST AP-2 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APM4 PE=1 SV=1
Length = 491
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 36/139 (25%)
Query: 16 SSVPWRRTGVKYTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMP------ 69
+ + WR G+ + +E + V E ++ ++ + GS + S + G ID LSG P
Sbjct: 196 NKITWRPKGIIHKKDEVFLYVNERINILVSRDGSILKSYVDGTIDITTHLSGTPICRFGL 255
Query: 70 ------------------------DLTLSFMNPR------LFDDVSFHPCVRFKRWEAER 99
D P+ L +D FH CV ++
Sbjct: 256 NDSLGMQSEDEKKWLAQQQRHSGSDFGNKNFIPKAAAGSVLLEDCKFHECVSLDKFNRNH 315
Query: 100 ILSFIPPDGNFRLMSYHTR 118
I+ F+PPDG+ LM YH R
Sbjct: 316 IIEFVPPDGSMELMKYHVR 334
>sp|Q2PWT8|AP4M1_RAT AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1
Length = 453
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 29 NNEAYFDVIEEVDAIIDKTGSTIFSEIQGYI----------DCCIKLS-----GMPDLTL 73
NE + DV+E + +I GS + ++QG I + CI L+ G +L
Sbjct: 184 KNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSSSEICIGLTEEFCVGKSELRG 243
Query: 74 SFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYH 116
R+ D+VSFH V +E+ RIL PP G +M Y
Sbjct: 244 YGPGIRV-DEVSFHSSVNLDEFESHRILHLQPPQGELTVMRYQ 285
>sp|Q9JKC7|AP4M1_MOUSE AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1
Length = 449
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 29 NNEAYFDVIEEVDAIIDKTGSTIFSEIQGYI----------DCCIKLS-----GMPDLTL 73
NE + DV+E + +I GS + ++QG I + CI L+ G +L
Sbjct: 184 KNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVGKSELRG 243
Query: 74 SFMNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYH 116
R+ D+VSFH V +E+ RIL PP G +M Y
Sbjct: 244 YGPGIRV-DEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQ 285
>sp|P38153|AP3M_YEAST AP-3 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APM3 PE=1 SV=2
Length = 483
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 18 VPWRRT-GVKYTNNEAYFDVIEEVDAIIDKTGS---TIFSEIQGYIDCCIKLSGMPDLTL 73
VPWR + K+ NNE Y D++E + +K S + I G +D L+ P + +
Sbjct: 199 VPWRTSRASKHENNELYVDLLETFHVVFEKKKSHLRLLTGSIHGIVDVRSYLNDNPLVAV 258
Query: 74 SFMNPRLFDDV---SFHPCVRFKRWE-AERILSFIPPDGNFRLMSYHTRVS 120
+ +D+ S H CV + ++FIPPDG FRL+ Y +S
Sbjct: 259 KL--NTMGNDIGIPSLHDCVEINDGVFSPSNITFIPPDGKFRLLEYSVDLS 307
>sp|O00189|AP4M1_HUMAN AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2
Length = 453
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 29 NNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFM------------ 76
NE + DV+E + +I GS + ++QG I L ++ +
Sbjct: 184 KNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRG 243
Query: 77 -NPRL-FDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYH 116
P + D+VSFH V +E+ RIL PP G +M Y
Sbjct: 244 YGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQ 285
>sp|Q29RY8|AP4M1_BOVIN AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1
Length = 452
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 29 NNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFM------------ 76
NE + DV+E + +I GS + ++QG I L ++ +
Sbjct: 184 KNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRG 243
Query: 77 -NPRL-FDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYH 116
P + D+VSFH V +E+ RIL PP G +M Y
Sbjct: 244 YGPGIRVDEVSFHSSVYLDEFESHRILRLQPPQGELTVMRYQ 285
>sp|Q9GPF0|AP4M_DICDI AP-4 complex subunit mu OS=Dictyostelium discoideum GN=apm4 PE=2
SV=1
Length = 530
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 42/133 (31%)
Query: 29 NNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFMNPR--------- 79
+NE Y D+ E + + G+ + +EI G I L G P L+L ++P
Sbjct: 227 DNEIYIDLCERLTVLYSSNGTILRNEITGKIQMKSYLRGNPALSLG-LSPEFTFKTIANR 285
Query: 80 -----------------------------LFDDVSFHPCVRFKRWEAERILSFIPPDGNF 110
+ DD SFH C ++ ++F PP G+F
Sbjct: 286 DESNENEIDNNNIGGVSNLSAPSSNTTSFIVDDCSFHECAG-SGFQPNNTINFKPPQGDF 344
Query: 111 RLMSYHTRVSGSN 123
L+ Y R+S +N
Sbjct: 345 TLLKY--RISNNN 355
>sp|Q9Y6Q2|STON1_HUMAN Stonin-1 OS=Homo sapiens GN=STON1 PE=1 SV=2
Length = 735
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 83 DVSFHPCVRFKRWEAERILSFIPPDG-NFRLMSYHTRVSGSN 123
D FH CV + +E RI+ F+P D F LM + T +G N
Sbjct: 484 DYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDN 525
>sp|Q8CDJ8|STON1_MOUSE Stonin-1 OS=Mus musculus GN=Ston1 PE=2 SV=2
Length = 730
Score = 35.0 bits (79), Expect = 0.19, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 27 YTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFMNPRL------ 80
Y E D+ + + + K G + S + I C L+G + L+ + L
Sbjct: 405 YEEQEICLDIQDSLWGKVTKEGQLVESAVVTQICCLCFLNGPAECFLALNDRELQKRDEC 464
Query: 81 -FD-----------DVSFHPCVRFKRWEAERILSFIPPDG-NFRLMSYHT 117
F+ D FH CV+ + +E RI+ F+P D F LM + T
Sbjct: 465 YFEKEPEKKGIAILDYHFHTCVKAEEFEQSRIIKFVPLDACRFELMRFKT 514
>sp|P90761|STNB_CAEEL Putative stoned B-like protein OS=Caenorhabditis elegans GN=unc-41
PE=2 SV=2
Length = 1693
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 27 YTNNEAYFDVIEEVDAIIDKTGSTIFSEIQGYIDCCIKLSGMPDLTLSFMNPRL------ 80
Y +E +E A +DK G + + + C L+G P L + + R
Sbjct: 1285 YKQDEVQIHCYDEYSAFVDKEGILSDQKARVRLFCLAFLTGSPVLEVGLNDRRRQGKEIV 1344
Query: 81 ---------------FDDVSFHPCVRFKRWEAERILSFIPPDGN-FRLMSYHTR 118
F+ + FH V ++ E++++F PPDG F +M + R
Sbjct: 1345 RRKDILPMYTERWIRFEALEFHSIVNKPEFDKEQVIAFSPPDGCFFEIMRFRVR 1398
>sp|A4TED9|Y5023_MYCGI Putative S-adenosyl-L-methionine-dependent methyltransferase
Mflv_5023 OS=Mycobacterium gilvum (strain PYR-GCK)
GN=Mflv_5023 PE=3 SV=1
Length = 307
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 78 PRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHTRVSGSNGGRPNASCPS 133
P D F P V W AE +L ++PPD RL+ +S S S PS
Sbjct: 168 PTALRDAGFDPSVP-TAWIAEGLLGYLPPDAQDRLLDTIGELSASGSRLAVESVPS 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,972,232
Number of Sequences: 539616
Number of extensions: 2416396
Number of successful extensions: 4640
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4550
Number of HSP's gapped (non-prelim): 62
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)