RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17624
(201 letters)
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 158 bits (398), Expect = 3e-46
Identities = 105/204 (51%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
Query: 1 TYFLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHL 60
TYFLLYDFIDYF+KD + LPR+K+L ++N IF K + AII +YT WE +
Sbjct: 367 TYFLLYDFIDYFDKDDATALPRDKYLEIMNNIFG-KATQAEREAIIFQYTSWEG-NPGYQ 424
Query: 61 NQKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ------WGEWMGVMHGDEIEY 114
NQ+ I AVGD+FF CPTN +AQ A RG V+YY+FT WGEWMGV+HGDEIEY
Sbjct: 425 NQQQIGRAVGDHFFTCPTNEYAQALAERGASVHYYYFTHRTSTSLWGEWMGVLHGDEIEY 484
Query: 115 VFGHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVPDDVEWPLYTKDHPYYYIFNAEK 174
FG PLN S++Y ER+L RM+ A FA G P D EWP ++K+ P YYIF+ +
Sbjct: 485 FFGQPLNNSLQYRPVERELGKRMLSAVIEFAKTGNPAQDGEEWPNFSKEDPVYYIFSTDD 544
Query: 175 SGT--GKGPRARTCSFWNDFYPKL 196
+GP A CSFWND+ PK+
Sbjct: 545 KIEKLARGPLAARCSFWNDYLPKV 568
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 134 bits (338), Expect = 7e-38
Identities = 74/204 (36%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 3 FLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHLNQ 62
F L F KD S + RE F+ V + A+ +YTDW + + N+
Sbjct: 327 FFLLYGAPGFSKDSESKISREDFMSGVKLSVPHAND-LGLDAVTLQYTDWMDDNNGIKNR 385
Query: 63 KLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ------WGEWMGVMHGDEIEYVF 116
+ D VGD+ ICP HF Y G Y YFF W EWMGV+HG EIE+VF
Sbjct: 386 DGLDDIVGDHNVICPLMHFVNKYTKFGNGTYLYFFNHRASNLVWPEWMGVIHGYEIEFVF 445
Query: 117 GHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVP---DDVEWPLYTKDHPYYYIFNAE 173
G PL + + Y A E LS R+M +A FA G P + +WPL+T + N E
Sbjct: 446 GLPLVKELNYTAEEEALSRRIMHYWATFAKTGNPNEPHSQESKWPLFTTKEQKFIDLNTE 505
Query: 174 KSGTGKGPRARTCSFWNDFYPKLI 197
+ R + C FWN F PKL+
Sbjct: 506 PMKVHQRLRVQMCVFWNQFLPKLL 529
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 526
Score = 134 bits (336), Expect = 1e-37
Identities = 70/205 (34%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 1 TYFLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHL 60
T FL+Y F KD S + R++F + F E +I+ YTDW +
Sbjct: 324 TAFLVYG-APGFSKDNNSIITRKEFQEGLKIFFPGVSE-FGKESILFHYTDWVDDQRPEN 381
Query: 61 NQKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ------WGEWMGVMHGDEIEY 114
++ + D VGDY FICP F + ++ G ++Y+F W EWMGVMHG EIE+
Sbjct: 382 YREALGDVVGDYNFICPALEFTKKFSEWGNNAFFYYFEHRSSKLPWPEWMGVMHGYEIEF 441
Query: 115 VFGHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVP---DDVEWPLYTKDHPYYYIFN 171
VFG PL R +Y E LS +++ +A FA G P WP++ Y N
Sbjct: 442 VFGLPLERRDQYTKAEEILSRSIVKRWANFAKYGNPQETQNQSTSWPVFKSTEQKYLTLN 501
Query: 172 AEKSGTGKGPRARTCSFWNDFYPKL 196
E + RA+ C FW F+PK+
Sbjct: 502 TESTRIMTKLRAQQCRFWTSFFPKV 526
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 131 bits (329), Expect = 1e-36
Identities = 74/207 (35%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 1 TYFLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHL 60
+YFL+Y + F KD S + R +FL V + A A++ YTDW + D
Sbjct: 336 SYFLVYG-VPGFSKDNESLISRAQFLAGVRIGVP-QASDLAAEAVVLHYTDWLHPEDPTH 393
Query: 61 NQKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ------WGEWMGVMHGDEIEY 114
+ +S VGD+ +CP A A++G +VY Y F W WMGV HG EIE+
Sbjct: 394 LRDAMSAVVGDHNVVCPVAQLAGRLAAQGARVYAYIFEHRASTLTWPLWMGVPHGYEIEF 453
Query: 115 VFGHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVP----DDVEWPLYTKDHPYYYIF 170
+FG PL+ S+ Y ER + R+M+ + FA G P +WP YT Y
Sbjct: 454 IFGLPLDPSLNYTTEERIFAQRLMKYWTNFARTGDPNDPRDSKSPQWPPYTTAAQQYVSL 513
Query: 171 NAEKSGTGKGPRARTCSFWNDFYPKLI 197
N + +G RA+TC+FWN F PKL+
Sbjct: 514 NLKPLEVRRGLRAQTCAFWNRFLPKLL 540
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 123 bits (308), Expect = 2e-33
Identities = 48/207 (23%), Positives = 71/207 (34%), Gaps = 14/207 (6%)
Query: 4 LLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHLNQK 63
L + E F LV+ + K A W + +K
Sbjct: 323 LFVGMDVPAINSNKQDVTEEDFYKLVSGLTVTKGLRGAQATYEVYTEPWAQDSSQETRKK 382
Query: 64 LISDAVGDYFFICPTNHFAQTYASRG--GKVYYYFFTQ------WGEWMGVMHGDEIEYV 115
+ D D F+ PT + S Y Y F+Q + +WMG H D+++YV
Sbjct: 383 TMVDLETDILFLIPTKIAVAQHKSHAKSANTYTYLFSQPSRMPIYPKWMGADHADDLQYV 442
Query: 116 FGHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVPDD----VEWPLYTKDHPYYYIFN 171
FG P + Y A++R +S M+ + FA G P W YT + Y N
Sbjct: 443 FGKPFATPLGYRAQDRTVSKAMIAYWTNFARTGDPNTGHSTVPANWDPYTLEDDNYLEIN 502
Query: 172 AE--KSGTGKGPRARTCSFWNDFYPKL 196
+ + R FW Y L
Sbjct: 503 KQMDSNSMKLHLRTNYLQFWTQTYQAL 529
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 101 bits (252), Expect = 6e-26
Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 15/202 (7%)
Query: 3 FLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHLNQ 62
+L+ + Y +G + +L V E +Y + + +
Sbjct: 337 WLIPMLMSYPLSEG-QLDQKTAMSLLWKSYPLVCIAKELIPEATEKYLGGTDDTVK--KK 393
Query: 63 KLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ--------WGEWMGVMHGDEIEY 114
L D + D F P+ A+ + G Y Y F + + HGDE+
Sbjct: 394 DLFLDLIADVMFGVPSVIVARNHRDAGAPTYMYEFQYRPSFSSDMKPKTVIGDHGDELFS 453
Query: 115 VFGHPLNRSIEYNARERDLSLRMMQAYARFALVGKPVPDDV-EWPLYTKDHPYYYIFNAE 173
VFG P + + E LS +M+ +A FA G P + + WP Y + Y I
Sbjct: 454 VFGAPFLKE-GASEEEIRLSKMVMKFWANFARNGNPNGEGLPHWPEYNQKEGYLQI--GA 510
Query: 174 KSGTGKGPRARTCSFWNDFYPK 195
+ + + + +FW + + K
Sbjct: 511 NTQAAQKLKDKEVAFWTNLFAK 532
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 94.9 bits (234), Expect = 2e-23
Identities = 32/172 (18%), Positives = 49/172 (28%), Gaps = 14/172 (8%)
Query: 39 SEQAAAIIHEYTDWENVMDEHLNQKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFF- 97
S+Q I Y + + S A GD F CP NH A + A + +
Sbjct: 344 SQQLNEINQVYPRGKLLPRHAAYFGASSAAYGDATFTCPGNHVASSAARYLPNSVWNYRV 403
Query: 98 -----TQWGEWMGVMHGDEIEYVFGHP----LNRSIEYNARERDLSLRMMQAYARFALVG 148
+ +GV H E+ +FG L+ Y + M + F
Sbjct: 404 NIIDESNIAGGIGVPHTFELPAIFGAGSTGTLSSDSSYLTYNAAIIPVTMHYFISFVQTL 463
Query: 149 KP----VPDDVEWPLYTKDHPYYYIFNAEKSGTGKGPRARTCSFWNDFYPKL 196
P EW + N + C+FW +
Sbjct: 464 NPNTYRYATAPEWNTWGNGQRLRLQTNDTAMEAVPESSLQDCAFWKSLTVPM 515
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
(Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Length = 544
Score = 83.6 bits (205), Expect = 1e-19
Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 29/196 (14%)
Query: 11 YFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHL---------N 61
F + + IF E ++ Y +V
Sbjct: 357 AFAPVALNATTTPHVKKWLQYIFYDASE-ASIDRVLSLYPQTLSVGSPFRTGILNALTPQ 415
Query: 62 QKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ---WGEWMGVMHGDEIEYVFGH 118
K ++ + D F P A++ + Y T ++G HG+E+ + F
Sbjct: 416 FKRVAAILSDMLFQSPRRVMLS--ATKDVNRWTYLSTHLHNLVPFLGTFHGNELIFQFNV 473
Query: 119 PLNRSIEYNARERDLSLRMMQAYARFALVGKP--VPDDVEWPLYTKDHPYYYIFNAEKSG 176
+ + ++ + FA P + ++W YT + + +
Sbjct: 474 NIG-----------PANSYLRYFISFANHHDPNVGTNLLQWDQYTDEGKEMLEIHMTDNV 522
Query: 177 TGKGP-RARTCSFWND 191
R S +
Sbjct: 523 MRTDDYRIEGISNFET 538
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 80.9 bits (198), Expect = 1e-18
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Query: 67 DAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQWGE---WMGVMHGDEIEYVFGHPLNRS 123
+ D F P +A S V+ Y F E + H E+ +VFG+
Sbjct: 355 HMMTDLLFWRPAVAYASAQ-SHYAPVWMYRFDWHPEKPPYNKAFHALELPFVFGNLDGLE 413
Query: 124 ----IEYNARERDLSLRMMQAYARFALVGKPVPDDVEWPLYTKDHPYYYIFNAE 173
E + LS + A+ FA G P + V WP Y ++ I ++E
Sbjct: 414 RMAKAEITDEVKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETRETVILDSE 467
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 76.0 bits (185), Expect = 7e-17
Identities = 38/198 (19%), Positives = 53/198 (26%), Gaps = 22/198 (11%)
Query: 1 TYFLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHL 60
T F L + + +I + Q + D
Sbjct: 343 TIFGLSSLNVTTNAQARAYFKQSFIHASDAEIDTLMAAYPQDITQGSPF-DTGIFNAITP 401
Query: 61 NQKLISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQ--WGEWMGVMHGDEIEYVFGH 118
K IS +GD FI +F +GG Y + Q MG H ++I +
Sbjct: 402 QFKRISAVLGDLAFIHARRYFL--NHFQGGTKYSFLSKQLSGLPIMGTFHANDIVWQDYL 459
Query: 119 PLNRSIEYNARERDLSLRMMQAYARFALVGKP--VPDDVEWPLYTKDHPYYY---IFNAE 173
S+ A+ FA P V WP YT + NA
Sbjct: 460 L-----------GSGSVIYNNAFIAFATDLDPNTAGLLVNWPKYTSSSQSGNNLMMINAL 508
Query: 174 KSGTGKGP-RARTCSFWN 190
TGK R
Sbjct: 509 GLYTGKDNFRTAGYDALM 526
>d2h3ja1 b.34.1.2 (A:1-75) Hypothetical protein PA4359 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 75
Score = 30.8 bits (70), Expect = 0.023
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 104 MGVMHGDEIEYVFGHPLNRSIEYNARERDLSLRMMQA 140
MG++ G + V PL I+ R+ L+LR
Sbjct: 30 MGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDL 66
>d2gcxa1 b.34.1.2 (A:1-75) Ferrous iron transport protein A, FeoA
{Klebsiella pneumoniae [TaxId: 573]}
Length = 75
Score = 30.0 bits (68), Expect = 0.035
Identities = 9/37 (24%), Positives = 13/37 (35%)
Query: 104 MGVMHGDEIEYVFGHPLNRSIEYNARERDLSLRMMQA 140
+G++ G V PL + R L LR
Sbjct: 29 LGMLPGSSFHVVRVAPLGDPVHIETRRVSLVLRKKDL 65
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 181
Score = 27.0 bits (58), Expect = 1.3
Identities = 12/123 (9%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Query: 5 LYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHLNQKL 64
L++ +KD + + ++ P + I D EN + ++
Sbjct: 21 LWNVFQRVDKDRSGVISDNELQQALSNGTW-TPFNPVTVRSIISMFDRENKAGVNFSEFT 79
Query: 65 ISDAVGDYFFICPTNHFAQTYASRGGKVYYYFFTQWGEWMGVMHGDEIEYVFGHPLNRSI 124
+ + + +G + D + F I
Sbjct: 80 GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQI 139
Query: 125 EYN 127
++
Sbjct: 140 AFD 142
>d1g8ka2 c.81.1.1 (A:4-682) Arsenite oxidase large subunit
{Alcaligenes faecalis [TaxId: 511]}
Length = 679
Score = 25.9 bits (55), Expect = 4.3
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 3/76 (3%)
Query: 93 YYYFFTQWGEWMGVMHG---DEIEYVFGHPLNRSIEYNARERDLSLRMMQAYARFALVGK 149
Y E G E F R+ + A D + + K
Sbjct: 573 DMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRK 632
Query: 150 PVPDDVEWPLYTKDHP 165
+ V+ P+ + D
Sbjct: 633 SGNNGVQLPVVSWDES 648
>d1rqpa2 c.132.1.1 (A:8-192) 5'-fluoro-5'-deoxyadenosine synthase
{Streptomyces cattleya [TaxId: 29303]}
Length = 185
Score = 25.2 bits (55), Expect = 4.9
Identities = 11/77 (14%), Positives = 18/77 (23%), Gaps = 9/77 (11%)
Query: 3 FLLYDFIDYFEKDGPSTLPREKFLILVNQIFKVKPESEQAAAIIHEYTDWENVMDEHLNQ 62
+ D +F + F + A I + +
Sbjct: 50 RYIVDLPRFFPEGTV-------FATTTYPA--TGTTTRSVAVRIKQAAKGGARGQWAGSG 100
Query: 63 KLISDAVGDYFFICPTN 79
A G Y +I P N
Sbjct: 101 AGFERAEGSYIYIAPNN 117
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.141 0.462
Gapped
Lambda K H
0.267 0.0534 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 875,477
Number of extensions: 41835
Number of successful extensions: 152
Number of sequences better than 10.0: 1
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 23
Length of query: 201
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 120
Effective length of database: 1,295,466
Effective search space: 155455920
Effective search space used: 155455920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)