BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1763
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7T105|MIER1_XENLA Mesoderm induction early response protein 1 OS=Xenopus laevis
GN=mier1 PE=2 SV=1
Length = 495
Score = 218 bits (555), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 143/211 (67%), Gaps = 10/211 (4%)
Query: 99 DDPKKTIMVGSEYQAWIPEGMCKYGDI-LPYENDDKLLWDPNHNLVTVDLVETYLKKSHE 157
+D KK IMVGS +QA IP G+CKY + YENDD+LLWDP + V + V +L ++
Sbjct: 167 EDWKKEIMVGSMFQAEIPVGICKYRETEKVYENDDQLLWDPEY--VMEERVIDFLNEASR 224
Query: 158 MFINGAG-DCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEEC 216
G D +P GSH +D+EQALY L++C ++TEEALRR + S+W+EEEC
Sbjct: 225 RTCEERGLDAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEEC 284
Query: 217 KNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLH 276
+NFE GL+ YGK+F+ I NKV+TR+VGE V FYY+WKK+ER+D FA + R KKKY+LH
Sbjct: 285 RNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLH 344
Query: 277 PGITDYMDRFLDEQEGSIN------PPASPN 301
PG+TDYMDR LDE E + + PP + N
Sbjct: 345 PGVTDYMDRLLDESESATSSRAPSPPPTTSN 375
>sp|Q5ZKT9|MIER1_CHICK Mesoderm induction early response protein 1 OS=Gallus gallus
GN=MIER1 PE=2 SV=1
Length = 513
Score = 217 bits (553), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 151/222 (68%), Gaps = 6/222 (2%)
Query: 99 DDPKKTIMVGSEYQAWIPEGMCKYGDI-LPYENDDKLLWDPNHNLVTVDLVETYLKKSHE 157
+D KK IMVGS +QA IP G+C+Y + YENDD+LLW+P+ ++ D V +L ++
Sbjct: 178 EDWKKEIMVGSMFQAEIPAGICRYKENEKVYENDDQLLWNPD--VLPEDKVIEFLNEASR 235
Query: 158 MFINGAG-DCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEEC 216
+ G D +P GSH +D+EQALY L++C ++TEE+LRR + S+W+EEEC
Sbjct: 236 RTGDEKGLDAIPEGSHIKDNEQALYELVKCNFDTEESLRRLRFNVKAAREELSVWTEEEC 295
Query: 217 KNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLH 276
+NFE GL++YGK+F+ I NKV+TR+VGE V FYY+WKK+ER+D FA + R KKKY+LH
Sbjct: 296 RNFEQGLKVYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLH 355
Query: 277 PGITDYMDRFLDEQE--GSINPPASPNVYLMSESSKRQRNSS 316
PG+TDYMDR LDE E S P+ P S +S+ +R S
Sbjct: 356 PGVTDYMDRLLDESESAASSRAPSPPPTASNSSTSQSEREDS 397
>sp|Q8N108|MIER1_HUMAN Mesoderm induction early response protein 1 OS=Homo sapiens
GN=MIER1 PE=1 SV=2
Length = 512
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/229 (48%), Positives = 151/229 (65%), Gaps = 9/229 (3%)
Query: 99 DDPKKTIMVGSEYQAWIPEGMCKYGDI-LPYENDDKLLWDPNHNLVTVDLVETYLKKSHE 157
+D KK IMVGS +QA IP G+C+Y + YENDD+LLWDP + + D V +LK +
Sbjct: 176 EDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEY--LPEDKVIIFLKDASR 233
Query: 158 MFINGAG-DCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEEC 216
+ G + +P GSH +D+EQALY L++C ++TEEALRR + S+W+EEEC
Sbjct: 234 RTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEEC 293
Query: 217 KNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLH 276
+NFE GL+ YGK+F+ I NKV+TR+VGE V FYY+WKK+ER+D FA + R KKKY+LH
Sbjct: 294 RNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLH 353
Query: 277 PGITDYMDRFLDEQEGSI-----NPPASPNVYLMSESSKRQRNSSLGNK 320
PG+TDYMDR LDE E + +PP + + S+S K S N+
Sbjct: 354 PGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQ 402
>sp|Q5REE1|MIER1_PONAB Mesoderm induction early response protein 1 OS=Pongo abelii
GN=MIER1 PE=2 SV=2
Length = 512
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 144/211 (68%), Gaps = 10/211 (4%)
Query: 99 DDPKKTIMVGSEYQAWIPEGMCKYGDI-LPYENDDKLLWDPNHNLVTVDLVETYLKKSHE 157
+D KK IMVGS +QA IP G+C+Y + YENDD+LLWDP + + D V +LK +
Sbjct: 176 EDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEY--LPEDKVIIFLKDASR 233
Query: 158 MFINGAG-DCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEEC 216
+ G + +P GSH +D+EQALY L++C ++TEEALRR + S+W+EEEC
Sbjct: 234 RTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEEC 293
Query: 217 KNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLH 276
+NFE GL+ YGK+F+ I NKV+TR+VGE V FYY+WKK+ER+D FA + R KKKY+LH
Sbjct: 294 RNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLH 353
Query: 277 PGITDYMDRFLDEQEGSIN------PPASPN 301
PG+TDYMDR LDE E + + PP + N
Sbjct: 354 PGVTDYMDRLLDESESAASSRAPSPPPTASN 384
>sp|Q5UAK0|MIER1_MOUSE Mesoderm induction early response protein 1 OS=Mus musculus
GN=Mier1 PE=1 SV=2
Length = 511
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 143/211 (67%), Gaps = 10/211 (4%)
Query: 99 DDPKKTIMVGSEYQAWIPEGMCKYGDI-LPYENDDKLLWDPNHNLVTVDLVETYLKKSHE 157
+D KK IMVGS +QA IP G+C+Y + YENDD+LLWDP + + V +LK +
Sbjct: 175 EDWKKEIMVGSMFQAEIPVGVCRYKENEKVYENDDQLLWDPE--CLPEEKVVVFLKDASR 232
Query: 158 MFINGAG-DCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEEC 216
+ G + +P GSH +D+EQALY L++C ++TEEALRR + S+W+EEEC
Sbjct: 233 RTGDEKGVEAIPEGSHIKDNEQALYELVKCSFDTEEALRRLRFNVKAAREELSVWTEEEC 292
Query: 217 KNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLH 276
+NFE GL+ YGK+F+ I NKV+TR+VGE V FYY+WKK+ER+D FA + R KKKY+LH
Sbjct: 293 RNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLH 352
Query: 277 PGITDYMDRFLDEQEGSIN------PPASPN 301
PG+TDYMDR LDE E + + PP + N
Sbjct: 353 PGVTDYMDRLLDESESAASSRAPSPPPTASN 383
>sp|Q4R3R9|MIER3_MACFA Mesoderm induction early response protein 3 OS=Macaca fascicularis
GN=MIER3 PE=2 SV=1
Length = 550
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 182/318 (57%), Gaps = 29/318 (9%)
Query: 1 MPLDELLAMYGYN----EHNNERSPSHGNPLAPPVSDPLMLDEEIEDDDEEEEEEEKQPV 56
MPL++LLA YGY N + S + LA + D + EEI D ++EE Q
Sbjct: 64 MPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSS 123
Query: 57 SQLAKLYEEGCSTSSKETA-------LSKALEEDDDEYNFFDEHPDDDD--DDPKKTIMV 107
+ + S +S ET+ S + D E D D + +D +K IM+
Sbjct: 124 AD-----DLTPSVTSHETSDFFPRPLRSNTTCDGDKESEVEDVETDSGNSPEDLRKEIMI 178
Query: 108 GSEYQAWIPEGMCKY-GDILPYENDDKLLWDPNHNL---VTVDLVETYLKKSHEMFINGA 163
G +YQA IP + +Y G+ YEN+D+LLW P+ L V LVET L+ +E +
Sbjct: 179 GLQYQAEIPPYLGEYAGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGNEKIM--- 235
Query: 164 GDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESGL 223
D + G+H+RD+EQALY LL+C +N +EA+ R + + + W+EEEC++FE L
Sbjct: 236 -DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQEGMTAWTEEECRSFEHAL 294
Query: 224 RMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITDYM 283
++GK+F+ I +NKV+TR V E V FYY+WKK+ER+D FA + R KK+Y+ HPG+TDYM
Sbjct: 295 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYM 354
Query: 284 DRFLDEQE---GSINPPA 298
DR +DE E G++N A
Sbjct: 355 DRLVDETEALGGTVNASA 372
>sp|Q7Z3K6|MIER3_HUMAN Mesoderm induction early response protein 3 OS=Homo sapiens
GN=MIER3 PE=1 SV=2
Length = 550
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 181/318 (56%), Gaps = 29/318 (9%)
Query: 1 MPLDELLAMYGYN----EHNNERSPSHGNPLAPPVSDPLMLDEEIEDDDEEEEEEEKQPV 56
MPL++LLA YGY N + S + LA + D + EEI D ++EE Q
Sbjct: 64 MPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSS 123
Query: 57 SQLAKLYEEGCSTSSKETA-------LSKALEEDDDEYNFFDEHPDDDD--DDPKKTIMV 107
+ + S +S ET+ S + D E D D + +D +K IM+
Sbjct: 124 AD-----DLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRKEIMI 178
Query: 108 GSEYQAWIPEGMCKY-GDILPYENDDKLLWDPNHNL---VTVDLVETYLKKSHEMFINGA 163
G +YQA IP + +Y G+ YEN+D+LLW P+ L V LVET L+ E +
Sbjct: 179 GLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKIM--- 235
Query: 164 GDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESGL 223
D + G+H+RD+EQALY LL+C +N +EA+ R + + + W+EEEC++FE L
Sbjct: 236 -DRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQEGMTAWTEEECRSFEHAL 294
Query: 224 RMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITDYM 283
++GK+F+ I +NKV+TR V E V FYY+WKK+ER+D FA + R KK+Y+ HPG+TDYM
Sbjct: 295 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYM 354
Query: 284 DRFLDEQE---GSINPPA 298
DR +DE E G++N A
Sbjct: 355 DRLVDETEALGGTVNASA 372
>sp|Q3UHF3|MIER3_MOUSE Mesoderm induction early response protein 3 OS=Mus musculus
GN=Mier3 PE=1 SV=2
Length = 551
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 180/319 (56%), Gaps = 30/319 (9%)
Query: 1 MPLDELLAMYGYNEH----NNERSPSHGNPLAPPVSDPLMLDEEIEDDDEEEEEEEKQPV 56
MPL++LLA YGY N + S + LA + D + EEI D ++EE Q
Sbjct: 64 MPLEDLLAFYGYESTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSS 123
Query: 57 SQLAKLYEEGCSTSSKETA-------LSKALEEDDDEYNFFDEHPDDDD--DDPKKTIMV 107
+ + S +S ET+ S + D E D D + +D ++ IM+
Sbjct: 124 AD-----DLTPSVTSHETSEFFPRPLRSNTTCDGDKESEIEDVETDSGNSPEDLRREIMI 178
Query: 108 GSEYQAWIPEGMCKYG--DILPYENDDKLLWDPNHNL---VTVDLVETYLKKSHEMFING 162
G EYQA IP + +Y D YEN+D+LLW P L V LVET L+ +E +
Sbjct: 179 GLEYQAEIPPYLGEYNGDDEKAYENEDQLLWHPGVLLESKVKEYLVETSLRTGNEKVL-- 236
Query: 163 AGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESG 222
D + G+H+RD+EQALY LL+C +N +EA+ R + + + W+EEEC++FE
Sbjct: 237 --DRISSGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQEGMTAWTEEECRSFEHA 294
Query: 223 LRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITDY 282
L ++GK+F+ I ++KV++R V E V FYY+WKK+ER+D FA + + KK+Y+ HPG+TDY
Sbjct: 295 LMLHGKDFHLIQKDKVRSRTVAECVAFYYMWKKSERYDYFAQQTKFGKKRYNHHPGVTDY 354
Query: 283 MDRFLDEQE---GSINPPA 298
MDR +DE E G+++ A
Sbjct: 355 MDRLVDETESLGGTVSSSA 373
>sp|Q8N344|MIER2_HUMAN Mesoderm induction early response protein 2 OS=Homo sapiens
GN=MIER2 PE=2 SV=2
Length = 545
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 163/295 (55%), Gaps = 22/295 (7%)
Query: 1 MPLDELLAMYGYNEHN--NERSPSHGNPLAPPVSDPLMLDEEIEDD---DEEEEEEEKQP 55
MP DELLA+YGY + ++R S G +AP + D + E+I D EEEEE +
Sbjct: 85 MPFDELLALYGYEASDPISDRE-SEGGDVAPNLPDMTLDKEQIAKDLLSGEEEEETQSSA 143
Query: 56 VSQLAKLYEEGCSTSSKETALSKALEEDDDEYNFFDEHPDDDDDDP----KKTIMVGSEY 111
+ S + S+ L ++D E ++D P KK IMVG ++
Sbjct: 144 DDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQF 203
Query: 112 QAWIPEGMCKYGDILPYENDDKLLWDPNHNLVTVDLVETYL-----KKSHEMFINGAGDC 166
QA + YEN+D+LLWDP+ ++ VE +L ++ HEM AG
Sbjct: 204 QADLSNLHLNRHCEKIYENEDQLLWDPS--VLPEREVEEFLYRAVKRRWHEM----AGPQ 257
Query: 167 LPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESGLRMY 226
LP G +D EQALY L++C +N EEALRR D WSEEEC+NFE G R++
Sbjct: 258 LPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVH 317
Query: 227 GKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITD 281
GKNF+ I NKV+TR+VGE V++YYLWKK+ER+D FA + RL ++KY + G TD
Sbjct: 318 GKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTTD 371
>sp|A5PJX4|MIER2_BOVIN Mesoderm induction early response protein 2 OS=Bos taurus GN=MIER2
PE=2 SV=1
Length = 561
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 161/288 (55%), Gaps = 23/288 (7%)
Query: 1 MPLDELLAMYGYNEHN--NERSPSHGNPLAPPVSDPLMLDEEIEDD---DEEEEEEEKQP 55
MPLDELLA+YGY + +ER S G+ A + D + ++I D EEEEE +
Sbjct: 85 MPLDELLALYGYETSDPISERE-SEGSDTAAHLPDMTLDKDQIAKDLLSGEEEEETQSSA 143
Query: 56 VSQLAKLYEEGCSTSSKETALSKALEEDDDEYNFFDEHPDDDDDDP----KKTIMVGSEY 111
+ S + S L + D E ++D P KK IMVG ++
Sbjct: 144 DDLTPSVTSHEASDLFPSQSGSCFLADADKEPGSSSSSDAEEDPLPANKCKKEIMVGPQF 203
Query: 112 QAWIPEGMC-KYGDILPYENDDKLLWDPNHNLVTVDLVETYL-----KKSHEMFINGAGD 165
QA + ++G+ + YEN+D+LLWDPN ++ VE +L ++ HEM AG
Sbjct: 204 QADLSNLHSNRHGEKI-YENEDQLLWDPN--ILPEREVEEFLYRAVKRRWHEM----AGS 256
Query: 166 CLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESGLRM 225
LP G +D EQALY L++C +N EEALRR D WSEEE +NFE G R+
Sbjct: 257 QLPEGEAVKDSEQALYELVKCNFNAEEALRRLRFNVKVIRDGLCAWSEEERRNFEHGFRV 316
Query: 226 YGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKY 273
+GKNF+ I NKV+TR+VGE V++YYLWKK+ER+D F+ + RL ++KY
Sbjct: 317 HGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFSQQTRLGRRKY 364
>sp|Q3U3N0|MIER2_MOUSE Mesoderm induction early response protein 2 OS=Mus musculus
GN=Mier2 PE=2 SV=1
Length = 541
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 13/290 (4%)
Query: 1 MPLDELLAMYGYNEHNN-ERSPSHGNPLAPPVSDPLMLDEEIEDD---DEEEEEEEKQPV 56
MPLDELLA+YGY + S G AP + D + E+I D EEEEE +
Sbjct: 85 MPLDELLALYGYESSDPISEQESEGGDTAPALPDMTLDKEQIAKDLLSGEEEEETQSSAD 144
Query: 57 SQLAKLYEEGCSTSSKETALSKALEEDDDEYNFFDEHPDDDD---DDPKKTIMVGSEYQA 113
+ S + S+ L D+ + ++D + KK IMVG ++QA
Sbjct: 145 DLTPSVTSHEASDLFHNQSGSRFLAGDNGPGSSASSDTEEDALPANKCKKEIMVGPQFQA 204
Query: 114 WI-PEGMCKYGDILPYENDDKLLWDPNHNLVTVDLVETYLKKS-HEMFINGAGDCLPMGS 171
+ + ++ D + YEN+D+LLW P+ ++ VE +L ++ + AG +P G
Sbjct: 205 DLNILHLNRHCDKI-YENEDQLLWSPS--VLPEREVEEFLYRAVKRRWQEMAGPQIPEGE 261
Query: 172 HSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFESGLRMYGKNFY 231
+D EQALY L++C +N EEALRR D WSEEEC+NFE G R++GKNF+
Sbjct: 262 VVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFEHGFRVHGKNFH 321
Query: 232 QIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITD 281
I NKV+TR+VGE V++YYLWKK+ER+D FA + RL ++K+ + G TD
Sbjct: 322 LIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKF-VSSGTTD 370
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 32/170 (18%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD--------KLLWDPNHNLVTVDLVETYLKKSH 156
I VG +QA +P D+ P+ + D +L+W P N DL+ YL+ +
Sbjct: 286 IRVGPSHQAKLP-------DLQPFPSPDGDTVTQHEELVWMPGVN--DCDLL-MYLRAAR 335
Query: 157 EMF-INGAGD-------CLPMGSHSRDDE--QALYLLLQCGYNTEEALRRASMQSVPNPD 206
M G D C+ + SRDD AL L + GY+ +AL+R + VP
Sbjct: 336 SMAAFAGMCDGGSTEDGCV---AASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPK-L 391
Query: 207 TTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKT 256
W+E+E K F GLR YGKNF++I + + + GE++ FYY WKKT
Sbjct: 392 IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441
>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus
GN=Rere PE=1 SV=3
Length = 1558
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 32/170 (18%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD--------KLLWDPNHNLVTVDLVETYLKKSH 156
I VG +QA +P D+ P+ + D +L+W P + DL+ YL+ +
Sbjct: 286 IRVGPSHQAKLP-------DLQPFPSPDGDTVTQHEELVWMPG--VSDCDLL-MYLRAAR 335
Query: 157 EMF-INGAGD-------CLPMGSHSRDDE--QALYLLLQCGYNTEEALRRASMQSVPNPD 206
M G D C+ + SRDD AL L + Y+ +AL+R + VP
Sbjct: 336 SMAAFAGMCDGGSTEDGCV---AASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPK-L 391
Query: 207 TTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKT 256
W+E+E K F GLR YGKNF++I + + ++ GE++ FYY WKKT
Sbjct: 392 IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYYYWKKT 441
>sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats protein OS=Rattus
norvegicus GN=Rere PE=2 SV=2
Length = 1559
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 32/170 (18%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD--------KLLWDPNHNLVTVDLVETYLKKSH 156
I VG +QA +P D+ P+ + D +L+W P + DL+ YL+ +
Sbjct: 285 IRVGPSHQAKLP-------DLQPFPSPDGDTVTQHEELVWMPG--VSDCDLL-MYLRAAR 334
Query: 157 EMF-INGAGD-------CLPMGSHSRDDE--QALYLLLQCGYNTEEALRRASMQSVPNPD 206
M G D C+ + SRDD AL L + Y+ +AL+R + VP
Sbjct: 335 SMAAFAGMCDGGSTEDGCV---AASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPK-L 390
Query: 207 TTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKT 256
W+E+E K F GLR YGKNF++I + + + GE++ FYY WKKT
Sbjct: 391 IEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 440
>sp|Q6PGA0|RCOR3_MOUSE REST corepressor 3 OS=Mus musculus GN=Rcor3 PE=2 SV=2
Length = 451
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 28/176 (15%)
Query: 97 DDDDPKKTIMVGSEYQAWIPE---GMCKYGDILPYENDDKLLWDPNHNLVTVDLVETYLK 153
DD+ + VG+EYQA IPE G KY D +N L+W P H++ L E Y+
Sbjct: 49 DDEHGDVGMRVGAEYQARIPEFDPGATKYTD---KDNGGMLVWSPYHSIPDAKLDE-YIA 104
Query: 154 KSHEMFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWS 212
+ E H + EQAL +L +N E++L A + + P PD W+
Sbjct: 105 IAKE-------------KHGYNVEQALGMLFWHKHNIEKSL--ADLPNFTPFPDE---WT 146
Query: 213 EEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
E+ FE +GK+F++I Q + + + +V++YY WKKT R + +AR
Sbjct: 147 VEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQAR 201
>sp|Q9P2K3|RCOR3_HUMAN REST corepressor 3 OS=Homo sapiens GN=RCOR3 PE=1 SV=2
Length = 495
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 28/168 (16%)
Query: 105 IMVGSEYQAWIPE---GMCKYGDILPYENDDKLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
+ VG+EYQA IPE G KY D +N L+W P H++ L E Y+ + E
Sbjct: 1 MRVGAEYQARIPEFDPGATKYTD---KDNGGMLVWSPYHSIPDAKLDE-YIAIAKE---- 52
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFE 220
H + EQAL +L +N E++L A + + P PD W+ E+ FE
Sbjct: 53 ---------KHGYNVEQALGMLFWHKHNIEKSL--ADLPNFTPFPDE---WTVEDKVLFE 98
Query: 221 SGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
+GK+F++I Q + + + +V++YY WKKT R + +AR
Sbjct: 99 QAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQAR 145
>sp|Q5ZJ40|RCOR3_CHICK REST corepressor 3 OS=Gallus gallus GN=RCOR3 PE=2 SV=1
Length = 378
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 28/168 (16%)
Query: 105 IMVGSEYQAWIPE---GMCKYGDILPYENDDKLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
+ VG+EYQA IP+ G KY D +N L+W P HN+ L E Y+ + E
Sbjct: 1 MRVGAEYQARIPDFEPGATKYTD---KDNGGMLVWSPYHNIPDAKLDE-YIAIAKE---- 52
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFE 220
H + EQAL +L +N E++L A + + P PD W+ E+ FE
Sbjct: 53 ---------KHGYNVEQALGMLFWHKHNIEKSL--ADLPNFTPFPDE---WTVEDKVLFE 98
Query: 221 SGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
+GK+F++I Q + + + +V++YY WKKT R + +AR
Sbjct: 99 QAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKTRSRTSLMDRQAR 145
>sp|Q90WN5|RCOR1_XENLA REST corepressor 1 OS=Xenopus laevis GN=rcor1 PE=2 SV=1
Length = 431
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 98 DDDPKKTIM-VGSEYQAWIPEGMCKYG-DILPYENDDKLLWDPNHNLVTVDLVETYLKKS 155
DD+P M VG +YQA +PE + + EN L+W PN N+ L E Y+ +
Sbjct: 44 DDEPGGGGMRVGLQYQAVVPEFDQEVAKNCQERENLGMLVWSPNQNISEAKLDE-YISVA 102
Query: 156 HEMFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEE 215
E H + EQAL +L +N E++L + P PD W+ E+
Sbjct: 103 KE-------------KHGYNMEQALGMLFWHKHNIEKSLADL-LNFTPFPDE---WTVED 145
Query: 216 CKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKARLEKK 271
FE +GK F++I Q + +++ +V+FYY WKKT + V AR +K+
Sbjct: 146 RVLFEQAFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRSKTSVMDRHARKQKR 201
>sp|Q8C796|RCOR2_MOUSE REST corepressor 2 OS=Mus musculus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD---KLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
I VG+ YQA IPE CK Y N + L+W PNH + L + Y+ + E
Sbjct: 46 IRVGTNYQAVIPE--CKPESPARYSNKELKGMLVWSPNHCVSDAKL-DKYIAMAKE---- 98
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFE 220
H + EQAL +LL ++ E++L A + + P PD W+ E+ FE
Sbjct: 99 ---------KHGYNIEQALGMLLWHKHDVEKSL--ADLANFTPFPDE---WTVEDKVLFE 144
Query: 221 SGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
+GK F +I Q + + + +V++YY WKKT R V +AR
Sbjct: 145 QAFGFHGKCFQRIQQ-MLPDKVIPSLVKYYYSWKKTRSRTSVMDRQAR 191
>sp|Q8IZ40|RCOR2_HUMAN REST corepressor 2 OS=Homo sapiens GN=RCOR2 PE=1 SV=2
Length = 523
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 25/167 (14%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD---KLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
I VG+ YQA IPE CK Y N + L+W PNH + L + Y+ + E
Sbjct: 46 IRVGTNYQAVIPE--CKPESPARYSNKELKGMLVWSPNHCVSDAKL-DKYIAMAKE---- 98
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFES 221
H + EQAL +LL ++ E++L + P PD W+ E+ FE
Sbjct: 99 ---------KHGYNIEQALGMLLWHKHDVEKSLADLA-NFTPFPDE---WTVEDKVLFEQ 145
Query: 222 GLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
+GK F +I Q + + + +V++YY WKKT R V +AR
Sbjct: 146 AFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKTRSRTSVMDRQAR 191
>sp|Q5FWT8|RCOR2_RAT REST corepressor 2 OS=Rattus norvegicus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD---KLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
I VG+ YQA IPE CK Y N + L+W PNH + L + Y+ + E
Sbjct: 46 IRVGTNYQAVIPE--CKPESPARYSNKELKGMLVWSPNHCVSDAKL-DKYIAMAKE---- 98
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFE 220
H + EQAL +LL ++ E++L A + + P PD W+ E+ FE
Sbjct: 99 ---------KHGYNIEQALGMLLWHKHDVEKSL--ADLANFTPFPDE---WTVEDKVLFE 144
Query: 221 SGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKAR 267
+GK F +I Q + + + +V++YY WKKT R V +AR
Sbjct: 145 QAFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKTRSRTSVMDRQAR 191
>sp|Q6P116|RCOR2_DANRE REST corepressor 2 OS=Danio rerio GN=rcor2 PE=2 SV=1
Length = 536
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 93 HPDDDDDDPKKTIMVGSEYQAWIPE----GMCKYGDILPYENDDKLLWDPNHNLVTVDLV 148
HP+D I VG +YQA IPE +YG+ + L+W PN V+ ++
Sbjct: 34 HPNDS------MIRVGGDYQAQIPEFKPDCASRYGE---KDQRSMLVWSPNSQ-VSDAML 83
Query: 149 ETYLKKSHEMFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDT 207
+ Y+ + E H + EQAL +LL ++ E++L A + + P PD
Sbjct: 84 DEYILMAKE-------------KHGYNMEQALGMLLWHKHDVEKSL--ADLANFTPFPDE 128
Query: 208 TSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKA 266
W+ E+ FE +GK+F++I Q + + + +V++YY WKKT R V +A
Sbjct: 129 ---WTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKMITSLVKYYYSWKKTRTRTSVMDRQA 184
Query: 267 R 267
R
Sbjct: 185 R 185
>sp|O94776|MTA2_HUMAN Metastasis-associated protein MTA2 OS=Homo sapiens GN=MTA2 PE=1
SV=1
Length = 668
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 105 IMVGSEYQAWIPEGMCKY-GDILPYENDDKLLWDPNHNLVTVDLVETYLKKSHEMFINGA 163
I VG +YQA IP+ + + D + + +WDP++ L + + + A
Sbjct: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
Query: 164 GDC----------LPMGSHSRDDE--QALYLLLQCGYNTEEALRRASMQSVP--NPDTTS 209
DC + + SRD A+ L + GY+ +A+ Q P D
Sbjct: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
Query: 210 MWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
WS E FE L YGK+F I Q+ + +++ IVQFYY+WK T+R+
Sbjct: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
>sp|Q9R190|MTA2_MOUSE Metastasis-associated protein MTA2 OS=Mus musculus GN=Mta2 PE=1
SV=1
Length = 668
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 47/266 (17%)
Query: 37 LDEEIEDDDEEEEEEEKQP-VSQ------------LAKLYEEGCSTSSKETALSKALEED 83
L+ + + E EEE KQP VS+ L++ +E +T + L E
Sbjct: 55 LNSLADSNAREFEEESKQPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNET 114
Query: 84 DDEYNFFDEHPDDDD--------DDPKKTIM-------VGSEYQAWIPEGMCKY-GDILP 127
D +++ D +D D +KT++ VG ++QA IP+ + + D
Sbjct: 115 D----ILNQYLDKEDCFFYSLVFDPVQKTLLADQGEIRVGCKFQAEIPDRLAEGESDNRN 170
Query: 128 YENDDKLLWDPNHNLVTVDLVETYLKKSHEMFINGAGDC----------LPMGSHSRDDE 177
+ + +WDP++ L + + + A DC + + SRD
Sbjct: 171 QQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDIT 230
Query: 178 --QALYLLLQCGYNTEEALRRASMQSVP--NPDTTSMWSEEECKNFESGLRMYGKNFYQI 233
A+ L + GY+ +A+ Q P D WS E FE L YGK+F I
Sbjct: 231 LFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDI 290
Query: 234 HQNKVKTRNVGEIVQFYYLWKKTERH 259
Q+ + +++ IVQFYY+WK T+R+
Sbjct: 291 RQDFLPWKSLASIVQFYYMWKTTDRY 316
>sp|Q09228|EGL27_CAEEL Egg-laying defective protein 27 OS=Caenorhabditis elegans GN=egl-27
PE=2 SV=2
Length = 1129
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 84 DDEYNFFDEHPDDDDDDPKKT---IMVGSEYQAWIP-EGMCKYGDILPYENDDKLLWDPN 139
D++ FF H + D T I VG+ +QA +P C GD + D+LL+ PN
Sbjct: 202 DNDTFFFCLHYNQDSTKLASTHYAIRVGTSFQATLPPMAECSVGD---DSDRDELLYRPN 258
Query: 140 HNLVTVDLVETYLK--KSHEMFINGAGDCLPMGSHSRDDE-------QALYLLLQCGYNT 190
+ E Y+K + + + L ++R + +A+ L + GY
Sbjct: 259 S--IESGEEEDYIKLARCYRTYTLSGNHMLDSQKNARSLQVSDLLMDEAIIQLHRSGYKI 316
Query: 191 EEALRRASMQSVPNPDTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFY 250
++AL + + ++++ K F G++ GKNF +IH+ + + ++V +Y
Sbjct: 317 DDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRELLPHHSREQLVSYY 376
Query: 251 YLWKKT 256
YLWKKT
Sbjct: 377 YLWKKT 382
>sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1
Length = 482
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD--KLLWDPNHNLVTVDLVETYLKKSHEMFING 162
+ VG +YQA +P+ E D+ L+W PN NL L E Y+ + E
Sbjct: 102 MRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEAKLDE-YIAIAKE----- 155
Query: 163 AGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFES 221
H + EQAL +L +N E++L A + + P PD W+ E+ FE
Sbjct: 156 --------KHGYNMEQALGMLFWHKHNIEKSL--ADLPNFTPFPDE---WTVEDKVLFEQ 202
Query: 222 GLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKARLEKK 271
+GK F++I Q + +++ +V+FYY WKKT + V AR +K+
Sbjct: 203 AFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQKR 252
>sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis GN=rcor2 PE=2 SV=1
Length = 503
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD---KLLWDPNHNLVTVDLVETYLKKSHEMFIN 161
I VGS+YQA IPE CK + P N + L+W P+ + L E Y+ + E
Sbjct: 43 IRVGSDYQAQIPE--CKPDNTSPSGNVELKGMLVWSPSQFVSDAKLNE-YITMAKE---- 95
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFES 221
H + EQ+L +LL ++ E +L + P P+ WS E+ FE
Sbjct: 96 ---------KHGYNVEQSLGMLLWHKHDVERSLADLA-NFTPFPEE---WSVEDKVLFEQ 142
Query: 222 GLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKA-RLEKKK 272
+GK+F +I Q + + + +V++YY WKKT R V +A RL+ K+
Sbjct: 143 AFSFHGKSFQRIQQ-MLPEKLIPSLVKYYYSWKKTRSRTSVMDRQARRLQAKR 194
>sp|Q0GGX2|ZN541_MOUSE Zinc finger protein 541 OS=Mus musculus GN=Znf541 PE=1 SV=1
Length = 1363
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 32/249 (12%)
Query: 55 PVSQLAKLY-EEGCSTSSKETAL-SKALEEDDDEYNFFDEHPDDDDDDPKKTIMVGSEYQ 112
P+ + + LY CSTS L S L++ D + DD + I VGS +Q
Sbjct: 1014 PIREGSGLYFNTLCSTSRAGPHLISPVLDQVDSSFGICVVK-DDTKISIEPHINVGSRFQ 1072
Query: 113 AWIPEGMCKYGDILPYENDDKLLWDPNHNLVT----VDLVETYLKKSHEMFINGAGDCLP 168
A IPE + + EN L+W P +++T D V + + G G L
Sbjct: 1073 AEIPELQERLLARV-DENVASLVWKPWGDVMTNPETQDRVMELCNVACSSVMPGGGTNLE 1131
Query: 169 MGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNP------DTTSMWSEEECKNFESG 222
+ H D Q + E L R + +P + +W+ E + F+
Sbjct: 1132 LALHCLHDAQGSVQV-----ALETLLLRGPQKPRTHPLADYRYTGSDIWTPMEKRLFKKA 1186
Query: 223 LRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKKKYSLHPGITDY 282
+ K+FY IH+ ++T++V + V++YY+WKK + D PG+
Sbjct: 1187 FCAHKKDFYLIHK-MIQTKSVAQCVEYYYIWKKMVKFDC------------GRAPGLEKR 1233
Query: 283 MDRFLDEQE 291
R LDE E
Sbjct: 1234 GRRELDEVE 1242
>sp|Q924K8|MTA3_MOUSE Metastasis-associated protein MTA3 OS=Mus musculus GN=Mta3 PE=1
SV=1
Length = 591
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 32/181 (17%)
Query: 102 KKTIMVGSEYQAWIPEGMCKYGDILPYENDDK-------LLWDPNHNLVTVDLVETYLKK 154
K I VG +YQA IP D+LP ++D++ +WDPN L + + +
Sbjct: 147 KGEIRVGPKYQADIP-------DMLPEDSDEREQSKLEVKVWDPNSPLTDRQIDQFLVVA 199
Query: 155 SHEMFINGAGDC----------LPMGSHSRDDE--QALYLLLQCGYNTEEALRRASMQSV 202
A DC + + SRD A+ L + GY+ A+ + + +
Sbjct: 200 RAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHGYDLSSAI--SVLVPL 257
Query: 203 PNP----DTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTER 258
P D WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R
Sbjct: 258 GGPVLCRDEMEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDR 317
Query: 259 H 259
+
Sbjct: 318 Y 318
>sp|Q4R2Z8|ZN541_MACFA Zinc finger protein 541 (Fragment) OS=Macaca fascicularis GN=ZNF541
PE=2 SV=2
Length = 804
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 67 CSTSSKETA---LSKALEEDDDEYNFFDEHPDDDDDDPKKTIMVGSEYQAWIPEGMCKYG 123
CSTS++ + +S L++ D + DD + I +GS +QA IPE +
Sbjct: 471 CSTSTQASPDQLISSMLDQVDGSFGICVVK-DDTKISIEPHINIGSRFQAEIPELQERSL 529
Query: 124 DILPYENDDKLLWDPNHNLV----TVDLVETYLKKSHEMFINGAGDCLPMGSHSRDDEQA 179
+ E+ L+W P +++ T D V + + G G L E A
Sbjct: 530 AGI-DEHVASLVWKPWGDMMINPETQDRVTELCNVACSSVMPGGGTNL---------ELA 579
Query: 180 LYLLLQCGYNTEEALRRASMQSVPNPDT----------TSMWSEEECKNFESGLRMYGKN 229
L+ L + N + AL ++ P T + +W+ E + F+ + K+
Sbjct: 580 LHCLHEAQGNVQVALETLLLRGPHKPPTHLLADYRYTGSDVWTPIEKRLFKKAFYAHKKD 639
Query: 230 FYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKK 271
FY IH+ ++T+ V + V++YY+WKK + D LEK+
Sbjct: 640 FYLIHKT-IQTKTVAQCVEYYYIWKKMIKFDC-GRAPGLEKR 679
>sp|Q9H0D2|ZN541_HUMAN Zinc finger protein 541 OS=Homo sapiens GN=ZNF541 PE=2 SV=2
Length = 1365
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 67 CSTSSKETA---LSKALEEDDDEYNFFDEHPDDDDDDPKKTIMVGSEYQAWIPEGMCKYG 123
CSTS++ + +S L++ D + DD + I +GS +QA IPE + +
Sbjct: 1034 CSTSTQASPDQLISSMLDQVDGSFGICVVK-DDTKISIEPHINIGSRFQAEIPE-LQERS 1091
Query: 124 DILPYENDDKLLWDPNHNLV----TVDLVETYLKKSHEMFINGAGDCLPMGSHSRDDEQA 179
E+ L+W P +++ T D V + + G G L E A
Sbjct: 1092 LAGTDEHVASLVWKPWGDMMISSETQDRVTELCNVACSSVMPGGGTNL---------ELA 1142
Query: 180 LYLLLQCGYNTEEALRRASMQSVPNPDT----------TSMWSEEECKNFESGLRMYGKN 229
L+ L + N + AL ++ P T + +W+ E + F+ + K+
Sbjct: 1143 LHCLHEAQGNVQVALETLLLRGPHKPRTHLLADYRYTGSDVWTPIEKRLFKKAFYAHKKD 1202
Query: 230 FYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLEKK 271
FY IH+ ++T+ V + V++YY+WKK + D LEK+
Sbjct: 1203 FYLIHK-MIQTKTVAQCVEYYYIWKKMIKFDC-GRAPGLEKR 1242
>sp|Q8CFE3|RCOR1_MOUSE REST corepressor 1 OS=Mus musculus GN=Rcor1 PE=1 SV=2
Length = 477
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDD--KLLWDPNHNLVTVDLVETYLKKSHEMFING 162
+ VG +YQA +P+ E D+ L+W PN +L L E Y+ + E
Sbjct: 96 MRVGPQYQAAVPDFDPAKLARRSQERDNLGMLVWSPNQSLSEAKLDE-YIAIAKE----- 149
Query: 163 AGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQS-VPNPDTTSMWSEEECKNFES 221
H + EQAL +L +N E++L A + + P PD W+ E+ FE
Sbjct: 150 --------KHGYNMEQALGMLFWHKHNIEKSL--ADLPNFTPFPDE---WTVEDKVLFEQ 196
Query: 222 GLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE-RHDVFANKARLEKK 271
+GK F++I Q + +++ +V+FYY WKKT + V AR +K+
Sbjct: 197 AFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQKR 246
>sp|A6QL72|MTA3_BOVIN Metastasis-associated protein MTA3 OS=Bos taurus GN=MTA3 PE=2 SV=1
Length = 590
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 102 KKTIMVGSEYQAWIPEGMCKYGDILPYENDDK-------LLWDPNHNLVTVDLVETYLKK 154
K I VG YQA IPE + L E+D++ +WDPN L + + +
Sbjct: 147 KGEIRVGPRYQADIPEML------LEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVA 200
Query: 155 SHEMFINGAGDC--------LPMGSHSRDDEQALY----LLLQCGYNTEEALRRASMQSV 202
A DC L M + + + L+ L + GY+ A+ + + +
Sbjct: 201 RAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHSMDTLYRHGYDLSSAI--SVLVPL 258
Query: 203 PNP----DTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTER 258
P D WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R
Sbjct: 259 GGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDR 318
Query: 259 H 259
+
Sbjct: 319 Y 319
>sp|Q9BTC8|MTA3_HUMAN Metastasis-associated protein MTA3 OS=Homo sapiens GN=MTA3 PE=1
SV=2
Length = 594
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Query: 102 KKTIMVGSEYQAWIPEGMCKYGDILPYENDDK-------LLWDPNHNLVTVDLVETYLKK 154
K I VG YQA IPE + L E+D++ +WDPN L + + +
Sbjct: 147 KGEIRVGPRYQADIPEML------LEGESDEREQSKLEVKVWDPNSPLTDRQIDQFLVVA 200
Query: 155 SHEMFINGAGDC--------LPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVP--- 203
A DC L M + + + L+ + Y L A VP
Sbjct: 201 RAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGG 260
Query: 204 ---NPDTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
D WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R+
Sbjct: 261 PVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRY 319
>sp|Q18919|RCOR_CAEEL REST corepressor spr-1 OS=Caenorhabditis elegans GN=spr-1 PE=1 SV=2
Length = 558
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 32/169 (18%)
Query: 103 KTIMVGSEYQAWIPE-----GMCKYGDILPYENDDKLLWDPNHNLVTVD--LVETYLKKS 155
K I VG+E+QA I + C ++ D+L+W+ T+D +E ++++S
Sbjct: 107 KEINVGTEFQAKIADLNLNDKACNED----RDDQDELIWNTPE---TIDDEKLEAFIRES 159
Query: 156 HEMFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEE 215
+ ++ +P+ ++ALY+L +N + A+ + ++ + +W+++E
Sbjct: 160 SDRYL------IPI-------DRALYILTINNFNFDSAIAEVARRN----ELKDVWTDQE 202
Query: 216 CKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFAN 264
FE+ +++GKNF QI ++ + R++ IVQFYY KK ++ F N
Sbjct: 203 ITLFENCYQIFGKNFSQI-RSALCHRSLQSIVQFYYESKKRVKYLNFVN 250
>sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster GN=CoRest PE=1 SV=1
Length = 657
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 25/158 (15%)
Query: 105 IMVGSEYQAWIPEGMCKYGDILPYENDDK--LLWDPNHNLVTVDLVETYLKKSHEMF-IN 161
I VG +YQA P + + P + +++ L+W P + + L E Y+ + E + N
Sbjct: 92 IRVGRDYQAVCPP-LVPEAERRPEQMNERALLVWSPTKEIPDLKL-EEYISVAKEKYGYN 149
Query: 162 GAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSMWSEEECKNFES 221
G EQAL +L ++ E A+ + P PD W+ E+ FE
Sbjct: 150 G--------------EQALGMLFWHKHDLERAVMDLA-NFTPFPDE---WTIEDKVLFEQ 191
Query: 222 GLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
+ +GK+F++I Q + +++ +V++YY WKKT RH
Sbjct: 192 AFQFHGKSFHRIRQ-MLPDKSIASLVKYYYSWKKT-RH 227
>sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1
SV=2
Length = 715
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 211 WSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
>sp|Q62599|MTA1_RAT Metastasis-associated protein MTA1 OS=Rattus norvegicus GN=Mta1
PE=1 SV=1
Length = 703
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 211 WSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
>sp|Q8K4B0|MTA1_MOUSE Metastasis-associated protein MTA1 OS=Mus musculus GN=Mta1 PE=1
SV=1
Length = 715
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 211 WSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERH 259
WS E FE L YGK+F I Q+ + +++ I+++YY+WK T+R+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
>sp|Q96PN7|TREF1_HUMAN Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1
SV=1
Length = 1200
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 30/181 (16%)
Query: 94 PDDDDDDPKKTIMVGSEYQAWIPEGMCKYGDILPYENDDK---LLWDPNHNLVTVDL--- 147
P + D + I +G +QA IPE DI D L+W P L DL
Sbjct: 770 PGEQTVDVEPRINIGLRFQAEIPE----LQDISALAQDTHKATLVWKPWPELENHDLQQR 825
Query: 148 VETYLKKSHEMFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALR----RASMQSVP 203
VE L + G G + E AL+ L + + AL R ++
Sbjct: 826 VENLLNLCCSSALPGGGT---------NSEFALHSLFEAKGDVMVALEMLLLRKPVRLKC 876
Query: 204 NP------DTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTE 257
+P + W+ E K F L Y K+F + Q VK++ V + V++YY WKK
Sbjct: 877 HPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFV-QKMVKSKTVAQCVEYYYTWKKIM 935
Query: 258 R 258
R
Sbjct: 936 R 936
>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus musculus GN=Trerf1 PE=1
SV=1
Length = 1205
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 26/179 (14%)
Query: 94 PDDDDDDPKKTIMVGSEYQAWIPEGMCKYGDILPYENDDK---LLWDPNHNLVTVDLVET 150
P + D + I +G +QA IPE D+ D L+W P +L
Sbjct: 776 PGEQTVDVEPRINIGLRFQAEIPE----LQDVSALAQDTHRATLVWKP-----WPELENQ 826
Query: 151 YLKKSHEMFIN-GAGDCLPMGSHSRDDEQALYLLLQCGYNT----EEALRRASMQSVPNP 205
L++ E +N LP G + E AL+ L + + E L R ++ +P
Sbjct: 827 ALQQQVENLLNLCCSSALPGGG--TNSEFALHSLFEAKGDVMATLEMLLLRKPVRLKCHP 884
Query: 206 ------DTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTER 258
+ W+ E K F L Y K+F + Q VK++ V + V++YY WKK R
Sbjct: 885 LANYHYAGSDKWTSLERKLFNKALATYSKDFIFV-QKMVKSKTVAQCVEYYYTWKKIMR 942
>sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens
GN=ELMSAN1 PE=1 SV=2
Length = 1045
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 105 IMVGSEYQAWIP---EGMCKYGDILPYENDDKLLWDPNHNLVTVD----LVETYLKKSHE 157
I VGS +QA IP + D P++ D L+W P +L + VE L +
Sbjct: 723 INVGSRFQAEIPLMRDRALAAAD--PHKAD--LVWQPWEDLESSREKQRQVEDLLTAACS 778
Query: 158 MFINGAGDCLPMGSHSRDDEQALYLLLQCGYNTEEALRRASMQSVPNPDTTSM------- 210
GAG + E AL+ L + + E L + ++ P +
Sbjct: 779 SIFPGAGT---------NQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHYTG 829
Query: 211 ---WSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKK 255
W E K F G+ +Y K+F+ + Q ++T+ V + V+FYY +KK
Sbjct: 830 SDQWKMAERKLFNKGIAIYKKDFFLV-QKLIQTKTVAQCVEFYYTYKK 876
>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus GN=Ncor2 PE=1 SV=3
Length = 2472
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 207 TTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKA 266
T+MWSE+E F + KNF I + ++ + V E V +YYL KK E + ++
Sbjct: 428 VTNMWSEQERDTFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENYKSLVRRS 486
Query: 267 RLEKKK 272
+ K
Sbjct: 487 YRRRGK 492
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 208 TSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKAR 267
+S W+EEE + + GL +G+N+ I V ++ V + FY+ +KK + D + +
Sbjct: 608 SSRWTEEEMETAKKGLLEHGRNWSAI-ARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 666
Query: 268 LEKKK 272
L+ +K
Sbjct: 667 LKMEK 671
>sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2
Length = 2525
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 210 MWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKARLE 269
MWSE+E + F + KNF I + ++ + V E V +YYL KK E + ++
Sbjct: 431 MWSEQEKETFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRR 489
Query: 270 KKK 272
+ K
Sbjct: 490 RGK 492
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 208 TSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFANKAR 267
+S W+EEE + + GL +G+N+ I V ++ V + FY+ +KK + D + +
Sbjct: 612 SSRWTEEEMETAKKGLLEHGRNWSAI-ARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 670
Query: 268 LEKKK 272
L+ +K
Sbjct: 671 LKMEK 675
>sp|P53127|SNT2_YEAST SANT domain-containing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNT2 PE=1 SV=1
Length = 1403
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 183 LLQCGYNTEEALRRA----SMQSVPNPDTTSMWSEEECKNFESGLRMYGKNFYQIHQNKV 238
LL Y+T EA ++ S + + P T++ E + FE + +G + + V
Sbjct: 532 LLFTNYDTAEAFKKCKRELSRKFLKEPSFTAV----EIRKFEEAVEKFGSELRPVCE-YV 586
Query: 239 KTRNVGEIVQFYYLWKKTER 258
T+ + IV+FYY WKKTER
Sbjct: 587 GTQPMSMIVRFYYNWKKTER 606
>sp|Q60974|NCOR1_MOUSE Nuclear receptor corepressor 1 OS=Mus musculus GN=Ncor1 PE=1 SV=1
Length = 2453
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 205 PDTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFAN 264
P TS W+EEE + + GL +G+N+ I + V T++ + FY+ +K+ RH+ N
Sbjct: 621 PVETSRWTEEEMEVAKKGLVEHGRNWAAIAK-MVGTKSEAQCKNFYFNYKR--RHN-LDN 676
Query: 265 KARLEKKKYSLHP 277
+ K+K S P
Sbjct: 677 LLQQHKQKASRKP 689
>sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2
Length = 2440
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 205 PDTTSMWSEEECKNFESGLRMYGKNFYQIHQNKVKTRNVGEIVQFYYLWKKTERHDVFAN 264
P TS W+EEE + + GL +G+N+ I + V T++ + FY+ +K+ RH+ N
Sbjct: 622 PVETSRWTEEEMEVAKKGLVEHGRNWAAIAK-MVGTKSEAQCKNFYFNYKR--RHN-LDN 677
Query: 265 KARLEKKKYSLHP 277
+ K+K S P
Sbjct: 678 LLQQHKQKTSRKP 690
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.128 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,116,598
Number of Sequences: 539616
Number of extensions: 7300593
Number of successful extensions: 61080
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 641
Number of HSP's that attempted gapping in prelim test: 49016
Number of HSP's gapped (non-prelim): 6746
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)