BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17636
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2
SV=1
Length = 947
Score = 140 bits (352), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
E QVRSI +HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN DITQVV
Sbjct: 414 FEYQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVE 473
Query: 159 NLPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKC 190
LP +K TWLT LVEF STGS+L+FVTKK
Sbjct: 474 ILPSGPEKWTWLTRRLVEFTSTGSVLVFVTKKA 506
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 69/98 (70%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDH+ I Y EKNFY+ HE I TPQ+ ELR K + VSGA PP SSF
Sbjct: 194 IDPLPPIDHTEIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFA 253
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE L+ +RK EYT PTPIQ Q +P ALSGRD+I
Sbjct: 254 HFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMI 291
>sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3
Length = 929
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 417 FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
Query: 159 NLPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKC 190
L K WLT LVEF S+GS+L+FVTKK
Sbjct: 477 ILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
>sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1
Length = 942
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 417 FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
Query: 159 NLPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 477 ILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1
Length = 938
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 417 FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
Query: 159 NLPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 477 ILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus gallus GN=DDX42 PE=2
SV=1
Length = 944
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 70/98 (71%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
FGFDE LM +RK EYT PTPIQ Q VP A+SGRD+I
Sbjct: 257 RFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMI 294
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 417 FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
Query: 159 NLPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
P K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 477 IFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium
discoideum GN=ddx42 PE=3 SV=1
Length = 986
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 69/98 (70%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I+PLPPIDHS Y E K FY+ H DIA LT ++ E+R I ++G D PV+SFG
Sbjct: 249 IEPLPPIDHSKEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFG 308
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
H+GFD++L++A+ K +PTPIQ QA+P ALSGRD+I
Sbjct: 309 HYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLI 346
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
PQV SI +HVRP+RQTLLFSATFK +E+ AR +L+DPIKI G IG AN+DITQ+V L
Sbjct: 471 PQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVL 530
Query: 161 -PQTQKLTWLTHNLVEFLSTGSLLIFVTKKC 190
+ K WLT+ L LS GS+LIFV+ K
Sbjct: 531 KSDSDKWNWLTNQLALLLSQGSVLIFVSTKV 561
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQVRSI +RP+RQTLLFSAT ++EKLAR++L+DPI++ G++G AN DITQVV
Sbjct: 392 FEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVN 451
Query: 159 NLP-QTQKLTWLTHNLVEFLSTGSLLIFVTKKC 190
+P +KL WL L + G +L+F +KK
Sbjct: 452 VIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKA 484
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I+P+ +DHS+I YE + K+FY+ E I+ +T QE + R + GI VSG D PV +F
Sbjct: 172 IEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFE 231
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF +M A++K Y PT IQ QA+P LSGRD+I
Sbjct: 232 DCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQ+RSI +RP+RQTLLFSAT ++E+LAR++LTDPI++ G +G AN DI QVV
Sbjct: 383 FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVN 442
Query: 159 NLP-QTQKLTWLTHNLVEFLSTGSLLIFVTKKC 190
LP +K+ WL L + G +L+F KK
Sbjct: 443 VLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKA 475
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I+P+PP+DHSTI YE K+FY+ ++ ++ QE + I VSG D P P+ SF
Sbjct: 163 IEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFA 222
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF LM A+ K Y PT IQ QA+P LSGRDII
Sbjct: 223 DCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 260
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++AR++P+E E R + GI+V G P P+ ++
Sbjct: 286 LEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQC 345
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ AL+K Y PTPIQAQA+PA +SGRD+I
Sbjct: 346 GISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLI 381
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ P+++ G +D+ Q VI
Sbjct: 507 FEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVI 566
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + GS++IFV K+
Sbjct: 567 VIEEEKKFLKLLEILGHYQEKGSVIIFVDKQ 597
>sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17
PE=2 SV=1
Length = 650
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-PPYPVSSFGHFGFDEVLMKALRK 75
+ EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMV 133
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 315
Query: 158 INLPQTQKLTWLTHNLVEFLS--TGSLLIFV--TKKCFELVNLIAKNYW 202
+++K L + E ++ +IFV ++C +L + ++ W
Sbjct: 316 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
>sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17
PE=1 SV=2
Length = 729
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-PPYPVSSFGHFGFDEVLMKALRK 75
+ EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMV 212
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 335 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 394
Query: 158 INLPQTQKLTWLTHNLVEFLS--TGSLLIFV--TKKCFELVNLIAKNYW 202
+++K L + E ++ +IFV ++C +L + ++ W
Sbjct: 395 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 443
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFD 66
+DHS I YE+ +K+FY E++ L+P E ELRA GI + G D P PV+S+ G
Sbjct: 367 VDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLS 426
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ + Y PT IQAQA+PA SGRD+I
Sbjct: 427 AQTISVINSLGYEKPTSIQAQAIPAITSGRDVI 459
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +++RP+RQT+LFSATF + +E LAR VL P++I G +++ Q+V
Sbjct: 585 FEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVE 644
Query: 159 NLPQTQKLTWLTHNLVEFLSTG---SLLIFVTKK 189
P+ K + L L E + L+FV ++
Sbjct: 645 VRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQ 678
>sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PRP5 PE=3 SV=2
Length = 875
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L IDHST+ Y + KNFYQ +I T ++ + +R + GI V+G++ P PV + H
Sbjct: 218 LETIDHSTMNYSDFRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVPRPVLKWSHL 277
Query: 64 GFDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDII 99
G M + K EY +PT IQ+QA+PA +SGRDII
Sbjct: 278 GLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDII 314
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVV-- 157
EPQV I +RP QT+LFSATF ++IE LA+ +L +P++I+ G I ++ITQ V
Sbjct: 441 EPQVTKISSQIRPESQTVLFSATFPRKIELLAKRLLYNPLEIIVGGISVVASEITQKVEL 500
Query: 158 -----INLPQTQKLTWLTHNLVEFLSTGS----LLIFVTKKCFE---LVNLIAKNY 201
+ + +K L N++ S S +LIFV K+ LV L+ N+
Sbjct: 501 FEKGESSQLEDEKFDRLL-NILNVFSIESKHSKVLIFVEKQSAADDLLVKLLGSNH 555
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGR-------------------D 97
V +G G E + + R E TP + + AA SGR D
Sbjct: 477 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 536
Query: 98 I-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV 156
+ EPQV I D+VRP+RQT++FSATF + +E L R +L+ PI++ G +D+ Q
Sbjct: 537 MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALVRRILSKPIEVQVGGRSVVCSDVEQQ 596
Query: 157 VINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
VI + + +K L L + +GS++IFV K+
Sbjct: 597 VIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGR-------------------D 97
V +G G E + + R E TP + + AA SGR D
Sbjct: 477 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 536
Query: 98 I-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV 156
+ EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q
Sbjct: 537 MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQ 596
Query: 157 VINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
VI + + +K L L + +GS++IFV K+
Sbjct: 597 VIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGR-------------------D 97
V +G G E + + R E TP + + AA SGR D
Sbjct: 477 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 536
Query: 98 I-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV 156
+ EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q
Sbjct: 537 MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQ 596
Query: 157 VINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
VI + + +K L L + +GS++IFV K+
Sbjct: 597 VIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGR-------------------D 97
V +G G E + + R E TP + + AA SGR D
Sbjct: 477 VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 536
Query: 98 I-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV 156
+ EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q
Sbjct: 537 MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQ 596
Query: 157 VINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
VI + + +K L L + +GS++IFV K+
Sbjct: 597 VIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
LPP DHS I YE K FY P ++ + +EA+ +R + GI + G D P PV ++G F
Sbjct: 349 LPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAF 408
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + ++ + +PT IQAQA+PA +SGRD+I
Sbjct: 409 GLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVI 444
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++VRP+ Q +LFSATF K +E LAR +L P++I G +I Q V
Sbjct: 570 FEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQRVE 629
Query: 159 NLPQTQKLTWLTHNLVEF 176
K T L L E
Sbjct: 630 VRDGDTKFTRLLEILGEM 647
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
LPP DHS I YE K FY P ++ + +EA+ +R + GI + G D P PV ++G F
Sbjct: 349 LPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAF 408
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + ++ + +PT IQAQA+PA +SGRD+I
Sbjct: 409 GLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVI 444
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++VRP+ Q +LFSATF K +E LAR +L P++I G +I Q V
Sbjct: 570 FEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQRVE 629
Query: 159 NLPQTQKLTWLTHNLVEF 176
K T L L E
Sbjct: 630 VRDGDTKFTRLLEILGEM 647
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFD 66
+DHS I YE K FY P +I ++ + A ++R + ITV G D P P++ + H G
Sbjct: 425 VDHSAIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLP 484
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +++ Y++PTPIQ+QA+PA +SGRDII
Sbjct: 485 ASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDII 517
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTD-PIKIVQGDIGEANTDITQVV 157
EPQV I +++RP+RQT+LFSATF K++E LAR VL + P++I G +I Q+V
Sbjct: 643 FEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIV 702
Query: 158 INLPQTQKLTWLTHNLVEFLS-------TGSLLIFVTKKCFE---LVNLIAKNY 201
+ K H L+E L LIFV ++ L +LI K Y
Sbjct: 703 EVRSEDTKF----HRLLEILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGY 752
>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana
GN=RH45 PE=2 SV=1
Length = 989
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQ+ I ++RP+RQT+LFSATF +++E LAR VL P++I G N DITQ+V
Sbjct: 563 FEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVE 622
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFV 186
P++++ + L L E+ G +L+FV
Sbjct: 623 IRPESERFSRLLELLGEWYEKGKVLVFV 650
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 3 DPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH 62
+ L +DHS I YE KNFY +DI+R+T R + + V G D P P+ +
Sbjct: 341 EKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQ 400
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ L+K Y P PIQAQA+P +SGRD I
Sbjct: 401 TGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCI 437
>sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum
GN=helB1 PE=2 SV=1
Length = 1151
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 9 DHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEV 68
DH++I Y E +KNFY +A +T E + R++ G+ ++G D P P+ S+ G E
Sbjct: 460 DHTSIKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEK 519
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ L+K +Y PT IQAQ +PA ++GRD+I
Sbjct: 520 VHLLLKKFQYEKPTSIQAQTIPAIMNGRDLI 550
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
PQ+ I D +RP+RQT++FSATF ++E +A+ +L P++I+ G ++DI Q V
Sbjct: 678 PQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVR 737
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
P + L L + G +LIF ++
Sbjct: 738 PTETRFRRLIELLSIWYHKGQILIFTNRQ 766
>sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP5 PE=3 SV=1
Length = 974
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELR-AKSGITVSGADPPYPVSSFGHFGFD 66
+DHS VYE+ + FY ++A +T E ELR + GI + G D P P+S + G
Sbjct: 327 VDHSKQVYEDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLP 386
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
M L Y PT IQAQA+PA +SGRD+I
Sbjct: 387 GPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVI 419
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLT-------DPIKIVQGDIGEANT 151
EPQV + +RP+RQT+LFSATF K++E+LAR VL+ PI+I+ G +
Sbjct: 553 FEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGPIEIIVGARSVVAS 612
Query: 152 DITQVV 157
+ITQ V
Sbjct: 613 EITQFV 618
>sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides
immitis (strain RS) GN=PRP5 PE=3 SV=1
Length = 1197
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
LP ++H TI YE K+FY D+A L +E LR + GI V G D P PV +
Sbjct: 505 LPTVNHETIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQC 564
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + +RK Y PT IQ+QA+PA +SGRD+I
Sbjct: 565 GLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVI 600
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++RP+RQT+LFSATF + +E LAR LT P++I+ G +ITQ+V
Sbjct: 726 FEPQVMKIISNIRPSRQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVE 785
Query: 159 NLPQTQKLTWLTHNLVEFLSTGS-----LLIFVTKKCFE---LVNLIAKNY 201
P+ K L L S + LIFV ++ L +L+ K Y
Sbjct: 786 VRPENTKFVRLLELLGNLYSDDNNEDARALIFVDRQEAADGLLRDLMRKGY 836
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQ+ I + RP+RQT+LFSATF +++E LAR VLT P++I G N DITQ+V
Sbjct: 591 FEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVE 650
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFV--TKKCFELV 194
P+ ++ L L E+ G +L+FV KC L+
Sbjct: 651 VRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLL 688
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 3 DPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH 62
+ L +DHS I Y+ KNFY +DI ++ +E R + + V G D P P+ ++
Sbjct: 369 EKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQ 428
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G L+ ++K + P IQAQA+P +SGRD I
Sbjct: 429 SGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCI 465
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+A+++ E E R ++ +T+SG D P P+ SF GF ++ +++ +
Sbjct: 74 EKNFYQEHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGF 133
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ Q P ALSGRD+I
Sbjct: 134 AKPTGIQCQGWPMALSGRDMI 154
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K +++LA D L DPI++ G + A+ ITQ+V
Sbjct: 277 FEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQIV 336
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS------LLIFVTKK--CFELVNLIAKNYW 202
L +K L + L T S ++IF + K C E+ + + W
Sbjct: 337 EVLTDFEK----RDRLAKHLETASQDQDSKIIIFASTKRTCDEITSYLRTEGW 385
>sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp5 PE=3 SV=1
Length = 1186
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH + YE K FY D+A ++ +EA LR + GI V G + P PVS +
Sbjct: 500 IPTVDHKKVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQC 559
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + + Y++PT IQAQA+PA +SGRD+I
Sbjct: 560 GLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVI 595
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +VRP++QT+LFSATF + +E LAR L P++IV G +ITQ+V
Sbjct: 721 FEPQVMKILANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVE 780
Query: 159 NLPQTQKLTWLTHNLVEFLST-----GSLLIFVTKKCFE---LVNLIAKNY 201
+ +K L L ST LIFV ++ L L+ K Y
Sbjct: 781 VRSEDKKFIRLLELLGNLYSTDENEDARALIFVERQEGADTLLRELMRKGY 831
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQ+ I ++RP RQT+LFSATF +++E LAR VL P++I G N DITQ+V
Sbjct: 696 FEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVE 755
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFV--TKKCFELVNLIAKNYW 202
P++ + L L E+ G +L+FV +KC L + K+ +
Sbjct: 756 VRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSY 801
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDE 67
+DHS I YE KNFY +DI+R+T +E R + + V G D P P+ + G
Sbjct: 479 VDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTS 538
Query: 68 VLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
++ ++K Y P PIQ QA+P +SGRD I
Sbjct: 539 KILDTMKKLNYEKPMPIQTQALPIIMSGRDCI 570
>sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP5 PE=3 SV=2
Length = 862
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELR-AKSGITVSGADPPYPVSSFGHF 63
L +D++ + Y V K FY P E++ + P++ LR A GI V G+D P P+ +
Sbjct: 212 LMALDYTQMEYTSVRKKFYTPPEELKDVPPEKVTALRTAMDGIKVRGSDCPMPIQKWAQL 271
Query: 64 GFDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDII 99
G +M L K Y +P+PIQ+QA+PA +SGRDII
Sbjct: 272 GLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDII 308
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV + +RP++Q +LFSATF K++E LAR L DPI+IV G I +ITQ V+
Sbjct: 435 EPQVNKVLSQIRPDKQMVLFSATFPKKLESLARSFLVDPIEIVAGGISVVAPEITQRVVL 494
Query: 160 LPQT-----QKLTWLTHNLVEFL---STGSLLIFVTKK 189
+ + +KL L + EF G +LIFV K+
Sbjct: 495 IDDSGDISQKKLQALLKIVDEFSVEDPEGKILIFVDKQ 532
>sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp5 PE=3 SV=1
Length = 1211
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH + YE K FY ++A +T +EA LR + GI V G D P PV +
Sbjct: 521 IPTVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQC 580
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + ++K Y +PT IQ+QA+PA +SGRD+I
Sbjct: 581 GLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVI 616
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++RP+RQT+LFSATF + +E LAR LT PI+IV G +ITQ+V
Sbjct: 742 FEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVE 801
Query: 159 NLPQTQKLTWLTHNLVEFLSTGS-----LLIFVTKKCFE---LVNLIAKNY 201
+ K L L S + LIFV ++ L L+ K Y
Sbjct: 802 VRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKGY 852
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 76
+ EKNFY H D+A + ++ ++ R ++ +TV G D P+P+++F GF + +++ ++
Sbjct: 86 KFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQ 145
Query: 77 EYTSPTPIQAQAVPAALSGRDII 99
+ PTPIQ Q P ALSGRD+I
Sbjct: 146 GFPKPTPIQCQGWPMALSGRDMI 168
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K +++L RD L DPI++ G + A+ ITQ+V
Sbjct: 291 FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLV 350
Query: 158 INLPQTQKLTWLTHNLVEFLS--TGSLLIFVTKK--CFELVNLIAKNYW 202
+ + K L +L L+ +L+F + K C E+ + + W
Sbjct: 351 EVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGW 399
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY HED+ +++ E ++ R ++ + + G D P P+ +F GF E ++K +++ +
Sbjct: 75 EKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGF 134
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ Q P ALSGRD+I
Sbjct: 135 EKPTAIQCQGWPMALSGRDMI 155
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K +++LARD L DPI++ G + A+ ITQ+V
Sbjct: 278 FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQLV 337
Query: 158 INLPQTQKLTWLTHNLVEFLST---GSLLIFVTKK--CFELVNLIAKNYW 202
+ K L +L E S ++IF + K C E+ + + ++ W
Sbjct: 338 EVVSDFDKRDRLVKHL-EIASKDKDSKIIIFASTKRTCDEITSYLRQDGW 386
>sp|Q754U8|PRP5_ASHGO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PRP5 PE=3 SV=2
Length = 855
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 20 KNFYQPHEDIARLTPQEAQELR-AKSGITVSGADPPYPVSSFGHFGFDEVLMKAL-RKCE 77
KNFYQ E+I++L+ +E +LR + + V G D P P+ + G + +M L R+ E
Sbjct: 236 KNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLLTRELE 295
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQAQA+PA +SGRD+I
Sbjct: 296 FTVPTPIQAQAIPAIMSGRDVI 317
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVV- 157
EPQV I +RP++Q +LFSATF +++ A +L DP+ I N +I Q V
Sbjct: 445 FEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYITVNSKSLINENIEQKVE 504
Query: 158 INLPQTQKLTWLTHNLV---EFLSTGSLLIFVTKK--CFELVNLIAKNYWLIQAV 207
I + K L H L + L+ ++FV+ + C L N + N + A+
Sbjct: 505 IFSNEEDKFKSLIHWLALTQQNLNDEKTIVFVSSQQICDILYNRLEANGFTTFAI 559
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY +A +T E +E R ITV G D P PV SF GF + +++ ++K +
Sbjct: 60 EKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGF 119
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PTPIQ+Q P A+ GRD+I
Sbjct: 120 TEPTPIQSQGWPMAMKGRDLI 140
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
+PQ+R I H+RP+RQTL +SAT+ K +E+L++ L +P K++ G +AN I Q+V
Sbjct: 263 FDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIV 322
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFV--TKKCFELVNLIAKNYW 202
+ ++QK L L + + +L+F+ K C ++ + + W
Sbjct: 323 DVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGW 369
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P ++H + YE K FY ++A++T +EA LR + GI V G D P PV +
Sbjct: 503 IPTVNHEKVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQC 562
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + + Y SPT IQ+QA+PA +SGRD+I
Sbjct: 563 GLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVI 598
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++RP+RQT+LFSATF + +E LAR LT PI+I+ G +ITQ+V
Sbjct: 724 FEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKALTKPIEIIVGGRSVVAPEITQIVE 783
Query: 159 NLPQTQKLTWLTHNLVEFLSTGS-----LLIFVTKKCFE---LVNLIAKNY 201
+ K L L S + LIFV ++ L L+ K Y
Sbjct: 784 VRNEDTKFVRLLEILGNLYSDDANEDARSLIFVERQEAADALLRELMRKGY 834
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH + YE K FY D+A+++ +EA LR + GI V G D P PV +
Sbjct: 493 IPAVDHKKVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQC 552
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + K Y T IQAQA+PA +SGRD+I
Sbjct: 553 GLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVI 588
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++RP+RQT+LFSATF + +E LAR LT PI+IV G +ITQ+V
Sbjct: 714 FEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVE 773
Query: 159 NLPQTQKLTWLTHNLVEFLST-----GSLLIFVTKKCFE---LVNLIAKNY 201
QK L L S+ LIFV ++ L L+ K Y
Sbjct: 774 VRNDDQKFVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGY 824
>sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp5 PE=3 SV=1
Length = 1193
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH + YE K FY ++A +T +EA LR + GI V G D P PV +
Sbjct: 503 IPAVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQC 562
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + + Y +PT IQ+QA+PA +SGRD+I
Sbjct: 563 GLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVI 598
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I ++RP+RQT+LFSATF + +E LAR LT PI+IV G +ITQ+V
Sbjct: 724 FEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVE 783
Query: 159 NLPQTQKLTWLTHNLVEFLSTGS-----LLIFVTKKCFE---LVNLIAKNY 201
+ K L L S + LIFV ++ L L+ K Y
Sbjct: 784 VRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKGY 834
>sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=DBP2 PE=3 SV=1
Length = 495
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 3 DPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH 62
DP+P + E +KNFYQ E I+R+TP E R + + V G + P+P+ F
Sbjct: 37 DPMP-----ELAPVEFQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEE 91
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF ++ +L + ++ PT IQ Q P ALSGRD++
Sbjct: 92 AGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMV 128
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I NRQTL++SAT+ + + LA + + I++V G+ + N+ I Q+V
Sbjct: 251 FEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIV 310
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 25 PHEDIARLTPQEAQELRAKSGIT---VSGADPPYPVSSFGHFGFDEVLMKALR-----KC 76
P ++A +E+++ +SG+ + G P P G + V+ R +C
Sbjct: 246 PTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEC 305
Query: 77 EYTSPTPIQAQAVPAALSGRDI-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVL 135
++T+ + + A D+ EPQ+R I +RP+RQTLL+SAT+ + +E LAR L
Sbjct: 306 QHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 365
Query: 136 TDPIKIVQGDIG-EANTDITQVVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK--CFE 192
DP K + G +AN I QV+ +P +K L L + + +LIFV K C +
Sbjct: 366 RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQ 425
Query: 193 LVNLIAKNYW 202
+ + + W
Sbjct: 426 VTRQLRMDGW 435
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 64
LP + +V+ EKNFY + +T Q+ R + I+V G D P P+ F
Sbjct: 114 LPKQNFGNLVH--FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDAN 171
Query: 65 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F + +++A+ K +T PTPIQAQ P AL GRD+I
Sbjct: 172 FPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 13/113 (11%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K +++LARD L DPI++ G + A+ +ITQ+V
Sbjct: 274 FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSLELAASHNITQLV 333
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS------LLIFVTKK--CFELVNLIAKNYW 202
+ + +K LV+ L T S +LIF + K C E+ + + ++ W
Sbjct: 334 EVVSEFEK----RDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGW 382
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY HE + + QE + R +S +T++G D P P+++F GF + ++K ++ +
Sbjct: 71 EKNFYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGF 130
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ Q P ALSGRD++
Sbjct: 131 DKPTSIQCQGWPMALSGRDMV 151
>sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5
PE=2 SV=1
Length = 614
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 76
+ EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + +
Sbjct: 53 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 77 EYTSPTPIQAQAVPAALSGRDII 99
+T PT IQAQ P ALSG D++
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMV 135
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 158 I---NLPQTQKLTWLTHNLVEFLSTGSLLIFVTK-KCFELVNLIAKNYWLIQAVGI 209
++ + +KL L ++ +++ TK +C EL + ++ W A+GI
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP2 PE=3 SV=1
Length = 552
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K ++ LARD L +PI++ G + A+ ITQ+V
Sbjct: 280 FEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLDNPIQVTIGSLELAASHTITQIV 339
Query: 158 INLPQTQKLTWLTHNLVEFL--STGSLLIFVTKK--CFELVNLIAKNYW 202
+ + QK L +L L S +L+F + K C E+ + + + W
Sbjct: 340 QVVTEYQKRDLLVKHLESALADSNSKVLVFASTKRTCDEVTSYLRADGW 388
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY H ++ T +E ++ R ++ +++ G D P+P++SF GF + ++ L+ +
Sbjct: 77 EKNFYNEHPNVTARTDREIEQFRKENEMSILGHDIPHPITSFDEAGFPDYVLNELKNQGF 136
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ Q P ALSGRD++
Sbjct: 137 PKPTGIQCQGWPMALSGRDMV 157
>sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5
PE=1 SV=1
Length = 614
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 76
+ EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + +
Sbjct: 53 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 77 EYTSPTPIQAQAVPAALSGRDII 99
+T PT IQAQ P ALSG D++
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMV 135
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 158 I---NLPQTQKLTWLTHNLVEFLSTGSLLIFVTK-KCFELVNLIAKNYWLIQAVGI 209
++ + +KL L ++ +++ TK +C EL + ++ W A+GI
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH+ + YE + FY D+A+++ +EA LR + GI V G D P PV +
Sbjct: 487 IPTVDHNKVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQC 546
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + K + S T IQAQA+PA +SGRD+I
Sbjct: 547 GLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVI 582
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +VRP+RQT+LFSATF + +E LAR LT PI+IV G +ITQ+V
Sbjct: 708 FEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVE 767
Query: 159 NLPQTQKLTWLTHNLVEFLST-----GSLLIFVTKKCFE---LVNLIAKNY 201
+ +K L L ST LIFV ++ L L+ K Y
Sbjct: 768 VCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGY 818
>sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis
GN=DDX5 PE=2 SV=1
Length = 614
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 76
+ EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + +
Sbjct: 53 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 77 EYTSPTPIQAQAVPAALSGRDII 99
+T PT IQAQ P ALSG D++
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMV 135
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 158 I---NLPQTQKLTWLTHNLVEFLSTGSLLIFVTK-KCFELVNLIAKNYWLIQAVGI 209
++ + +KL L ++ +++ TK +C EL + ++ W A+GI
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5
PE=2 SV=1
Length = 614
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 76
+ EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + +
Sbjct: 53 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 77 EYTSPTPIQAQAVPAALSGRDII 99
+T PT IQAQ P ALSG D++
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMV 135
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 158 I---NLPQTQKLTWLTHNLVEFLSTGSLLIFVTK-KCFELVNLIAKNYWLIQAVGI 209
++ + +KL L ++ +++ TK +C EL + ++ W A+GI
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY +A +T +E + R + ITV G D P PV F GF E +++ + K +
Sbjct: 52 EKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGF 111
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PTPIQ+Q P AL GRD+I
Sbjct: 112 VEPTPIQSQGWPMALRGRDLI 132
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ++ I +RP+RQTL +SAT+ K +E+LAR+ L DP K++ G +AN I+Q V
Sbjct: 255 FEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHV 314
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFV--TKKCFELVNLIAKNYW 202
L ++QK L + L + + +LIF+ K C ++ + + W
Sbjct: 315 EILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 361
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EK+FY+ H D+A + +E +E R K +TV G + P PV +F GF + ++ ++ +
Sbjct: 82 EKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGF 141
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ+Q P ALSGRD++
Sbjct: 142 ERPTAIQSQGWPMALSGRDVV 162
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQ-- 155
EPQ+R I +RP+RQT ++SAT+ K + +LA D L D I++ G + AN ITQ
Sbjct: 285 FEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIV 344
Query: 156 -VVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK-CFELVNLIAKNYW 202
VV + + K+ ++E S L+ TK+ E+ + ++ W
Sbjct: 345 EVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGW 393
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EK+FY+ H D+A + +E +E R K +TV G + P PV +F GF + ++ ++ +
Sbjct: 80 EKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGF 139
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ+Q P ALSGRD++
Sbjct: 140 ERPTAIQSQGWPMALSGRDVV 160
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I +RP+RQT ++SAT+ K + +LA D L D I++ G + AN ITQ+V
Sbjct: 283 FEPQIRKIISQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIV 342
Query: 158 INLPQTQKLTWLTHNLVEFLST--GSLLIFVTKK--CFELVNLIAKNYW 202
+ +K + +L + + LIF K E+ + ++ W
Sbjct: 343 EVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGW 391
>sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1
Length = 1181
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH+ + YE K FY D+A+++ E LR + GI V G D P PV +
Sbjct: 495 IPKVDHAKMEYEPFRKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQC 554
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + + Y +PT IQ+QA+PA +SGRD+I
Sbjct: 555 GLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVI 590
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +VRP+RQT+LFSATF + +E LAR L P++IV G +ITQ+V
Sbjct: 716 FEPQVMKIMANVRPDRQTVLFSATFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVE 775
Query: 159 NLPQTQKLTWLTHNLVEFLST-----GSLLIFVTKKCFE---LVNLIAKNY 201
+ +K L L S+ LIFV ++ L L+ K Y
Sbjct: 776 VRNEDKKFVRLLELLGNLYSSDENEDARALIFVERQEAADTLLRELMRKGY 826
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,270,819
Number of Sequences: 539616
Number of extensions: 3333268
Number of successful extensions: 10968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 9449
Number of HSP's gapped (non-prelim): 1538
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)