Your job contains 1 sequence.
>psy17636
YIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSF
GHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIEPQVRSICDHVRPNRQTLLFS
ATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNLVEFLSTG
SLLIFVTKKCFELVNLIAKNYWLIQAVGILMCPKSPSRLSLV
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17636
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 350 3.7e-63 2
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 337 1.2e-60 2
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 337 4.8e-60 2
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 334 4.9e-60 2
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 334 1.1e-59 2
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 334 3.2e-59 2
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 334 3.2e-59 2
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 334 3.3e-59 2
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 334 3.3e-59 2
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 329 3.5e-59 2
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 334 4.0e-59 2
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 296 3.8e-53 2
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 313 3.3e-48 2
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 273 4.6e-46 2
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 246 4.0e-41 2
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 219 6.0e-32 2
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 201 1.8e-30 2
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 201 1.9e-30 2
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 201 1.9e-30 2
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 201 1.9e-30 2
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 201 1.9e-30 2
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 201 1.9e-30 2
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 199 3.0e-30 2
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 201 4.9e-30 2
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 205 6.6e-30 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 187 8.9e-30 2
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 185 1.5e-29 2
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 202 1.6e-29 2
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 210 1.6e-29 2
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 210 1.6e-29 2
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 210 1.6e-29 2
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 210 1.6e-29 2
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 210 1.6e-29 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 210 2.4e-29 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 210 2.4e-29 2
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 210 2.5e-29 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 210 2.5e-29 2
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 181 8.9e-29 2
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 180 1.4e-28 2
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 190 9.5e-28 2
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 188 9.8e-28 2
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 202 1.5e-27 2
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 210 3.8e-27 2
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 210 3.8e-27 2
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 191 9.2e-27 2
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 174 3.1e-26 2
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 174 3.1e-26 2
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 174 3.1e-26 2
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 174 3.1e-26 2
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 174 3.1e-26 2
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 174 3.1e-26 2
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 174 4.0e-26 2
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 183 4.2e-26 2
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 172 5.0e-26 2
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 172 5.0e-26 2
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 167 5.9e-26 2
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 178 7.0e-26 2
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 178 7.3e-26 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 182 1.1e-24 2
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 173 2.3e-24 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 180 4.6e-24 2
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 170 1.2e-23 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 159 2.3e-23 2
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 159 3.4e-23 2
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 161 5.1e-23 2
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 152 2.1e-20 2
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 152 2.1e-20 2
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 156 3.3e-20 2
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 146 3.0e-18 2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 156 1.0e-17 2
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 137 3.6e-17 2
UNIPROTKB|I3LV06 - symbol:DDX59 "Uncharacterized protein"... 158 1.3e-16 2
FB|FBgn0015331 - symbol:abs "abstrakt" species:7227 "Dros... 136 1.4e-16 2
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 138 1.6e-16 2
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 137 2.2e-16 2
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 137 2.2e-16 2
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 137 2.2e-16 2
UNIPROTKB|J3KNN5 - symbol:DDX41 "Probable ATP-dependent R... 137 2.4e-16 2
UNIPROTKB|J9NZF6 - symbol:DDX41 "Uncharacterized protein"... 137 2.5e-16 2
ZFIN|ZDB-GENE-030131-1927 - symbol:ddx41 "DEAD (Asp-Glu-A... 132 7.8e-16 2
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 139 8.6e-16 2
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 132 1.0e-15 2
RGD|1559513 - symbol:RGD1559513 "similar to DEAD (Asp-Glu... 132 1.1e-15 2
RGD|1311758 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box po... 132 1.1e-15 2
UNIPROTKB|E1BXX5 - symbol:DDX59 "Uncharacterized protein"... 161 1.9e-15 2
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 201 2.2e-15 1
MGI|MGI:1915247 - symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) bo... 156 2.4e-15 2
UNIPROTKB|E2R4Z9 - symbol:DDX59 "Uncharacterized protein"... 147 5.8e-15 2
RGD|1359520 - symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box po... 152 6.0e-15 2
UNIPROTKB|Q66HG7 - symbol:Ddx59 "Probable ATP-dependent R... 152 6.0e-15 2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 128 7.2e-15 2
UNIPROTKB|E2R4Y9 - symbol:DDX59 "Uncharacterized protein"... 147 7.5e-15 2
SGD|S000000441 - symbol:PRP5 "RNA helicase in the DEAD-bo... 146 8.0e-15 2
UNIPROTKB|G3X7G8 - symbol:DDX59 "Uncharacterized protein"... 157 1.3e-14 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 143 1.4e-14 2
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 134 5.3e-14 2
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 134 8.4e-14 2
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 135 1.3e-13 2
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 186 1.5e-13 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 144 1.5e-13 2
WARNING: Descriptions of 231 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 350 (128.3 bits), Expect = 3.7e-63, Sum P(2) = 3.7e-63
Identities = 67/98 (68%), Positives = 76/98 (77%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPI HS I YE EKNFY H+DIA L ++ +ELR G+ V+G PP PV+SFG
Sbjct: 213 IDPLPPIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFG 272
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE L+KA+RK EYT PTPIQAQAVP ALSGRDII
Sbjct: 273 HFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDII 310
Score = 331 (121.6 bits), Expect = 3.7e-63, Sum P(2) = 3.7e-63
Identities = 71/106 (66%), Positives = 83/106 (78%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQVRSIC+HVRP+RQ L+FSATFKKRIE+LARDVL+DP++IVQGD+ EAN DITQ V
Sbjct: 434 EPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSVYV 493
Query: 160 LPQT-QKLTWLTHNLVEFLSTGSLLIFVTKKC-FELV--NLIAKNY 201
P QK WL +LV+FLS GS+LIFVTKK E V NL+ K Y
Sbjct: 494 FPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEY 539
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 337 (123.7 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF
Sbjct: 192 IDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFA 251
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP A+SGRD+I
Sbjct: 252 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMI 289
Score = 318 (117.0 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 413 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 472
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
P K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 473 FPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 511
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 337 (123.7 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF
Sbjct: 199 IDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFA 258
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP A+SGRD+I
Sbjct: 259 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMI 296
Score = 318 (117.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 420 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 479
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
P K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 480 FPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 518
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 334 (122.6 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 321 (118.1 bits), Expect = 4.9e-60, Sum P(2) = 4.9e-60
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 515
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 334 (122.6 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 73/108 (67%), Positives = 83/108 (76%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN DITQ+V
Sbjct: 422 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQIVEV 481
Query: 160 LPQTQ-KLTWLTHNLVEFLSTGSLLIFVTKK--CFELV-NLIAKNYWL 203
L Q K WLT LVEF S GS+L+FVTKK C EL NLI + Y L
Sbjct: 482 LQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELATNLIQEGYSL 529
Score = 317 (116.6 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 63/98 (64%), Positives = 68/98 (69%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I PLPPIDHS I Y EKNFY HE+I+ LT E ELR K + VSGA PP P +SF
Sbjct: 201 IMPLPPIDHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFA 260
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD I
Sbjct: 261 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAI 298
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 334 (122.6 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 313 (115.2 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 334 (122.6 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 313 (115.2 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 334 (122.6 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 313 (115.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 334 (122.6 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 313 (115.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 329 (120.9 bits), Expect = 3.5e-59, Sum P(2) = 3.5e-59
Identities = 64/98 (65%), Positives = 70/98 (71%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
FGFDE LM +RK EYT PTPIQ Q VP A+SGRD+I
Sbjct: 257 RFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMI 294
Score = 318 (117.0 bits), Expect = 3.5e-59, Sum P(2) = 3.5e-59
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
P K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 FPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 334 (122.6 bits), Expect = 4.0e-59, Sum P(2) = 4.0e-59
Identities = 65/98 (66%), Positives = 71/98 (72%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLPPIDHS I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF
Sbjct: 197 IDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFA 256
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 257 HFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
Score = 312 (114.9 bits), Expect = 4.0e-59, Sum P(2) = 4.0e-59
Identities = 63/91 (69%), Positives = 74/91 (81%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKK 189
L K WLT LVEF S+GS+L+FVTKK
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKK 508
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 296 (109.3 bits), Expect = 3.8e-53, Sum P(2) = 3.8e-53
Identities = 55/98 (56%), Positives = 69/98 (70%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
IDPLP IDHS I Y++ KNFY+ HEDI RL + L+ + V G PP PV SF
Sbjct: 209 IDPLPDIDHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFA 268
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
HF FD++LM+A+RK EY PTPIQA A+P+ALSGRD++
Sbjct: 269 HFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVL 306
Score = 292 (107.8 bits), Expect = 3.8e-53, Sum P(2) = 3.8e-53
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QV+SI DHVRP+RQ L+FSATFK+++E+LARD L DP++IVQG++GEAN DI Q V
Sbjct: 431 EAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFV 490
Query: 160 LP-QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ Q KL WL NLVEF S G +LIFVTKK
Sbjct: 491 MQNQDVKLHWLIRNLVEFASLGKVLIFVTKK 521
Score = 47 (21.6 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFLSTG---SLLIFVTKKCFELVN 195
+V D+ DI+++ VIN + + H + G + VT+K E+V
Sbjct: 564 LVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVG 623
Query: 196 LIAKN 200
+ KN
Sbjct: 624 HLVKN 628
Score = 36 (17.7 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 186 VTKKCFELVNLIAKNYWLIQ 205
+ +K F + N K +WLI+
Sbjct: 484 IEQKVFVMQNQDVKLHWLIR 503
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 313 (115.2 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 66/99 (66%), Positives = 77/99 (77%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E QVRSI HVRP+RQTLLFSATF+K+IEKLARD+L DPI++VQGDIGEAN D+TQ+V
Sbjct: 418 EYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEI 477
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKKCF--ELVN 195
L K WLT LVEF S+GS+L+FVTKK EL N
Sbjct: 478 LHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELAN 516
Score = 230 (86.0 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 53/101 (52%), Positives = 63/101 (62%)
Query: 2 IDPLPPIDHSTIV--YEEVEKNFYQPHEDIARLTPQEAQELRAKSGIT-VSGADPPYPVS 58
IDPLPPIDHS + Y E+ K Y ++ + + + I+ VSGA PP P S
Sbjct: 197 IDPLPPIDHSELDRNYFEI-KIIYNTKDEC--IDASNLELINTLHFISRVSGAAPPRPGS 253
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF HFGFDE LM +RK EYT PTPIQ Q VP ALSGRD+I
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI 294
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 273 (101.2 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 52/98 (53%), Positives = 69/98 (70%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I+PLPPIDHS Y E K FY+ H DIA LT ++ E+R I ++G D PV+SFG
Sbjct: 249 IEPLPPIDHSKEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFG 308
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
H+GFD++L++A+ K +PTPIQ QA+P ALSGRD+I
Sbjct: 309 HYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLI 346
Score = 251 (93.4 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 54/90 (60%), Positives = 66/90 (73%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
PQV SI +HVRP+RQTLLFSATFK +E+ AR +L+DPIKI G IG AN+DITQ+V L
Sbjct: 471 PQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVL 530
Query: 161 PQ-TQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ K WLT+ L LS GS+LIFV+ K
Sbjct: 531 KSDSDKWNWLTNQLALLLSQGSVLIFVSTK 560
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 246 (91.7 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 48/91 (52%), Positives = 65/91 (71%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQVRSI +RP+RQTLLFSAT ++EKLAR++L+DPI++ G++G AN DITQVV
Sbjct: 393 EPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNV 452
Query: 160 LPQ-TQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+P +KL WL L + G +L+F +KK
Sbjct: 453 IPSDAEKLPWLLEKLPGMIDEGDVLVFASKK 483
Score = 228 (85.3 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 45/98 (45%), Positives = 62/98 (63%)
Query: 2 IDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFG 61
I+P+ +DHS+I YE + K+FY+ E I+ +T QE + R + GI VSG D PV +F
Sbjct: 172 IEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFE 231
Query: 62 HFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF +M A++K Y PT IQ QA+P LSGRD+I
Sbjct: 232 DCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 219 (82.2 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 43/96 (44%), Positives = 60/96 (62%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++AR++P+E E R + GI+V G P P+ ++
Sbjct: 303 LEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQC 362
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ AL+K Y PTPIQAQA+PA +SGRD+I
Sbjct: 363 GISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLI 398
Score = 172 (65.6 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ P+++ G +D+ Q VI
Sbjct: 525 EPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQHVIV 584
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + GS++IFV K+
Sbjct: 585 IEEEKKFLKLLEILGHYQEKGSVIIFVDKQ 614
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 201 (75.8 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 201 (75.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 201 (75.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 201 (75.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 201 (75.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 201 (75.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 199 (75.1 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Score = 176 (67.0 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 540 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + +K L L + +GS++IFV K+
Sbjct: 600 IEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 201 (75.8 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 40/96 (41%), Positives = 58/96 (60%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A++T +E R + GITV G P P+ ++
Sbjct: 317 LEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQC 376
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ AL+K Y PTPIQ+QA+PA ++GRD+I
Sbjct: 377 GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLI 412
Score = 172 (65.6 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 38/90 (42%), Positives = 56/90 (62%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF + +E LAR +L+ PI++ G +D+ Q VI
Sbjct: 539 EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIV 598
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K L L + GS++IFV K+
Sbjct: 599 IEEENKFLKLLELLGHYQEKGSVIIFVDKQ 628
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 205 (77.2 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 41/96 (42%), Positives = 59/96 (61%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L DHS + Y + +KNFY E+I R+T E + R + ITV G D P P+ ++
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + +M L+K EY+ PT IQAQA+P+ +SGRD+I
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVI 345
Score = 166 (63.5 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 35/90 (38%), Positives = 55/90 (61%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQ+ + +++RP++QT+LFSATF + +E LAR VL P++I+ G +DITQ +
Sbjct: 472 EPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVI 531
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ QK L L + GS ++FV K+
Sbjct: 532 CAEHQKFLKLLELLGMYYEEGSSIVFVDKQ 561
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 187 (70.9 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 43/105 (40%), Positives = 63/105 (60%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQ+ I ++RP RQT+LFSATF +++E LAR VL P++I G N DITQ+V
Sbjct: 697 EPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEV 756
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVT--KKCFELV-NLIAKNY 201
P++ + L L E+ G +L+FV +KC L ++I +Y
Sbjct: 757 RPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSY 801
Score = 185 (70.2 bits), Expect = 8.9e-30, Sum P(2) = 8.9e-30
Identities = 37/97 (38%), Positives = 53/97 (54%)
Query: 3 DPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH 62
+ L +DHS I YE KNFY +DI+R+T +E R + + V G D P P+ +
Sbjct: 474 EKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQ 533
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ ++K Y P PIQ QA+P +SGRD I
Sbjct: 534 TGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCI 570
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 185 (70.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQ+ I ++RP+RQT+LFSATF +++E LAR VL P++I G N DITQ+V
Sbjct: 564 EPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEI 623
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFV 186
P++++ + L L E+ G +L+FV
Sbjct: 624 RPESERFSRLLELLGEWYEKGKVLVFV 650
Score = 183 (69.5 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 3 DPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH 62
+ L +DHS I YE KNFY +DI+R+T R + + V G D P P+ +
Sbjct: 341 EKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQ 400
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ L+K Y P PIQAQA+P +SGRD I
Sbjct: 401 TGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCI 437
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 202 (76.2 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 41/82 (50%), Positives = 52/82 (63%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E +ELR K IT+ G + P PV +F F + +M AL
Sbjct: 50 EKNFYVEHPEVARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQN 109
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 110 FTEPTPIQCQGFPLALSGRDMV 131
Score = 156 (60.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 65/108 (60%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D ++I G++ AN +I Q+V
Sbjct: 255 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVD 314
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 315 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 362
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 210 (79.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMV 133
Score = 152 (58.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 257 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 317 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 210 (79.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMV 133
Score = 152 (58.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 257 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 317 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 210 (79.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMV 133
Score = 152 (58.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 257 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 317 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 210 (79.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMV 133
Score = 152 (58.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 256 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 315
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 316 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 363
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 210 (79.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMV 133
Score = 152 (58.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 257 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 317 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 364
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 210 (79.0 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 131 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 190
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMV 212
Score = 152 (58.6 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 336 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 395
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 396 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 443
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 210 (79.0 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 131 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 190
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMV 212
Score = 152 (58.6 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 336 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 395
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 396 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 443
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 210 (79.0 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 133 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 192
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMV 214
Score = 152 (58.6 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 338 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 397
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 398 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 445
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 210 (79.0 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 43/82 (52%), Positives = 51/82 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 77
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 133 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 192
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+T PTPIQ Q P ALSGRD++
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMV 214
Score = 152 (58.6 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D +I G++ AN +I Q+V
Sbjct: 338 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 397
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+++K L + E ++ +IFV TK+ C +L + ++ W
Sbjct: 398 VCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGW 445
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 181 (68.8 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY +A +T E +E R ITV G D P PV SF GF + +++ ++K +
Sbjct: 60 EKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGF 119
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PTPIQ+Q P A+ GRD+I
Sbjct: 120 TEPTPIQSQGWPMAMKGRDLI 140
Score = 171 (65.3 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 37/106 (34%), Positives = 64/106 (60%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
+PQ+R I H+RP+RQTL +SAT+ K +E+L++ L +P K++ G +AN I Q+V
Sbjct: 264 DPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVD 323
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK-CFELVNLIAKNYW 202
+ ++QK L L + + +L+F+ TKK C ++ + + W
Sbjct: 324 VISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGW 369
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 180 (68.4 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY H D+A + ++ ++ R ++ +TV G D P+P+++F GF + +++ ++ +
Sbjct: 88 EKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGF 147
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PTPIQ Q P ALSGRD+I
Sbjct: 148 PKPTPIQCQGWPMALSGRDMI 168
Score = 172 (65.6 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 40/113 (35%), Positives = 65/113 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K +++L RD L DPI++ G + A+ ITQ+V
Sbjct: 292 EPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVE 351
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFVTKK--CFELVNLIAKNYWLIQAV 207
+ + K L +L L+ +L+F + K C E+ + + W A+
Sbjct: 352 VIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAI 404
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 190 (71.9 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ + D+AR + QE + R ITV G D P P+ F F + +M + K +
Sbjct: 57 EKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNW 116
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PTPIQAQ P ALSG+D++
Sbjct: 117 TDPTPIQAQGWPVALSGKDMV 137
Score = 155 (59.6 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 44/115 (38%), Positives = 66/115 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L + I+I G + AN +I Q+V
Sbjct: 261 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVD 320
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L L E +S +IFV TK+ C +L + ++ W A+GI
Sbjct: 321 VCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGW--PAMGI 373
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 188 (71.2 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L IDHS++ Y KNFY ++ R+T + ++ R+ GI V G P P+ ++
Sbjct: 456 LAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQC 515
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + M+ LR+ + PTPIQ QA+PA +SGRD+I
Sbjct: 516 GVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLI 551
Score = 165 (63.1 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I D+VRP+RQT++FSATF +++E LAR +L PI+++ G ++ Q V+
Sbjct: 678 EPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVI 737
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
L K L L + GS+++FV K+
Sbjct: 738 LNDDAKFFKLLELLGIYQEAGSIIVFVDKQ 767
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 202 (76.2 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 41/93 (44%), Positives = 55/93 (59%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFD 66
+DHS I YE+ +K+FY E++ L+P E ELRA GI + G D P PV+S+ G
Sbjct: 367 VDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLS 426
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ + Y PT IQAQA+PA SGRD+I
Sbjct: 427 AQTISVINSLGYEKPTSIQAQAIPAITSGRDVI 459
Score = 147 (56.8 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I +++RP+RQT+LFSATF + +E LAR VL P++I G +++ Q+V
Sbjct: 586 EPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEV 645
Query: 160 LPQTQKLTWLTHNLVEFLSTG---SLLIFVTKK 189
P+ K + L L E + L+FV ++
Sbjct: 646 RPEESKFSRLLELLGELYNNQLDVRTLVFVDRQ 678
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 210 (79.0 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 44/96 (45%), Positives = 61/96 (63%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITV-SGADPPYPVSSFGHF 63
L PID TI EKNFY+ HEDI++L+ +E +E+R K IT+ G + P PV S
Sbjct: 59 LAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKI 118
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF + ++K+L+ +PTPIQ Q P ALSG+D+I
Sbjct: 119 GFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMI 154
Score = 126 (49.4 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTD-PIKIVQGDIG-EANTDITQVV 157
E Q+R I D +RP+RQTL++SAT+ K ++ LA+D+ + PI++ G + A I Q +
Sbjct: 278 ELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEI 337
Query: 158 INLPQTQKLTWLTHNLVE-FLSTGSLLIFV-TKK 189
L + +K+ L L F +++FV TKK
Sbjct: 338 YLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKK 371
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 210 (79.0 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 44/96 (45%), Positives = 61/96 (63%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITV-SGADPPYPVSSFGHF 63
L PID TI EKNFY+ HEDI++L+ +E +E+R K IT+ G + P PV S
Sbjct: 59 LAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKI 118
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
GF + ++K+L+ +PTPIQ Q P ALSG+D+I
Sbjct: 119 GFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMI 154
Score = 126 (49.4 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTD-PIKIVQGDIG-EANTDITQVV 157
E Q+R I D +RP+RQTL++SAT+ K ++ LA+D+ + PI++ G + A I Q +
Sbjct: 278 ELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEI 337
Query: 158 INLPQTQKLTWLTHNLVE-FLSTGSLLIFV-TKK 189
L + +K+ L L F +++FV TKK
Sbjct: 338 YLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKK 371
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 191 (72.3 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 36/91 (39%), Positives = 56/91 (61%)
Query: 9 DHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEV 68
DH++I Y E +KNFY +A +T E + R++ G+ ++G D P P+ S+ G E
Sbjct: 460 DHTSIKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEK 519
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ L+K +Y PT IQAQ +PA ++GRD+I
Sbjct: 520 VHLLLKKFQYEKPTSIQAQTIPAIMNGRDLI 550
Score = 152 (58.6 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
PQ+ I D +RP+RQT++FSATF ++E +A+ +L P++I+ G ++DI Q V
Sbjct: 678 PQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVR 737
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
P + L L + G +LIF ++
Sbjct: 738 PTETRFRRLIELLSIWYHKGQILIFTNRQ 766
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 18/84 (21%), Positives = 29/84 (34%)
Query: 20 KNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYT 79
+N YQ H + PQ+ Q+ + S + H + +
Sbjct: 83 QNKYQNHHQ--QSPPQQQQQQQNSSYVPSQPPQQQTQTQQQPHIQAPPPAKPRKSRFDQA 140
Query: 80 SPT-PIQAQAVPAALSGRDIIEPQ 102
T PIQA P +S + I + Q
Sbjct: 141 PETIPIQAPQQPPMISNQPIFKQQ 164
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 174 (66.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 174 (66.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 112 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 171
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 172 TEPTAIQAQGWPVALSGLDMV 192
Score = 157 (60.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 316 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 375
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 376 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 428
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 183 (69.5 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
+P +DH+ + YE + FY D+A+++ +EA LR + GI V G D P PV +
Sbjct: 487 IPTVDHNKVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQC 546
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G + + K + S T IQAQA+PA +SGRD+I
Sbjct: 547 GLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVI 582
Score = 154 (59.3 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 37/80 (46%), Positives = 47/80 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I +VRP+RQT+LFSATF + +E LAR LT PI+IV G +ITQ+V
Sbjct: 709 EPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEV 768
Query: 160 LPQTQKLTWLTHNLVEFLST 179
+ +K L L ST
Sbjct: 769 CNEEKKFVRLLELLGNLYST 788
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 38 QELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCE--YTSPTPIQAQAVPAALSG 95
+E+ KSG++ + + P P + G D K + + Q A P+ L G
Sbjct: 208 EEIDRKSGLSPAVSSPQSPATQ----GVDAAPAAYAGKFDPKAIAKNAAQTPAAPSVL-G 262
Query: 96 RDIIEP 101
D+ P
Sbjct: 263 NDVAVP 268
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 172 (65.6 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 37/81 (45%), Positives = 46/81 (56%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 172 (65.6 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 37/81 (45%), Positives = 46/81 (56%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
Score = 157 (60.3 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 259 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 318
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 319 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 371
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 167 (63.8 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
+K+FY+ HE++ + E E R + I V G + P PV++F GF ++K +++ +
Sbjct: 83 QKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGF 142
Query: 79 TSPTPIQAQAVPAALSGRDII 99
+PTPIQ QA P A+SGRD++
Sbjct: 143 EAPTPIQQQAWPMAMSGRDMV 163
Score = 160 (61.4 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQT++FSAT+ K +++LARD L D I++ G + A+ +I Q+V
Sbjct: 287 EPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVE 346
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKKCFE-LVNLIAKNYWLIQAV 207
+ K L ++ E L +LIF TK+ + + + ++ W A+
Sbjct: 347 VVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAI 399
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 178 (67.7 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+ R T QE ++ R+ +TV G + P P+ +F F +M+ +++ +
Sbjct: 43 EKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNF 102
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 103 TEPTAIQAQGWPVALSGLDMV 123
Score = 149 (57.5 bits), Expect = 7.0e-26, Sum P(2) = 7.0e-26
Identities = 41/115 (35%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L + + I G + AN +I Q+V
Sbjct: 247 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVD 306
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C +L + ++ W A+GI
Sbjct: 307 VCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGW--PAMGI 359
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 178 (67.7 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+ R T QE ++ R+ +TV G + P P+ +F F +M+ +++ +
Sbjct: 51 EKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNF 110
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 111 TEPTAIQAQGWPVALSGLDMV 131
Score = 149 (57.5 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 41/115 (35%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L + + I G + AN +I Q+V
Sbjct: 255 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVD 314
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C +L + ++ W A+GI
Sbjct: 315 VCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGW--PAMGI 367
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 182 (69.1 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 39/95 (41%), Positives = 52/95 (54%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 64
L PI EKNFY H D+++ T +E ++ RA +TV G + P P+ F
Sbjct: 331 LSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAP 390
Query: 65 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F LMK + + +PTPIQ+QA P AL GRDII
Sbjct: 391 FPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDII 425
Score = 137 (53.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I +RP+RQTL+FSAT+ K ++ LA D LTD I++ G AN ++ Q+V
Sbjct: 549 EPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIV 607
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 173 (66.0 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 36/96 (37%), Positives = 53/96 (55%)
Query: 4 PLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHF 63
P+ P+D S + +KNFYQ H ++A +P E Q R + ITV G P P+ F
Sbjct: 230 PMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEV 286
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +MK +R+ Y +PT IQAQ P A+SG + +
Sbjct: 287 HLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFV 322
Score = 142 (55.0 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I +RP+RQTL++SAT+ K +++LA D L + I+I G + AN +I QVV
Sbjct: 446 EPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVD 505
Query: 159 ---NLPQTQKLTWLTHNLVEFL-STGSLLIFV-TKKCFE-LVNLI 197
+ +KL L ++ + S G ++IFV TK+ + LV I
Sbjct: 506 VCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFI 550
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 173 LVEFLSTGSLLIFVTKKCFELV 194
L++FLS GS + K+C LV
Sbjct: 415 LIDFLSAGSTNL---KRCTYLV 433
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 180 (68.4 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 5 LPPIDHSTIVYEEVEKNFY-QPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGH 62
+P ID+S + V KNF+ +P+E ++ +T E ELR + GI VSG D P PV +
Sbjct: 324 IPTIDYSKLDIVPVRKNFWVEPYE-LSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSL 382
Query: 63 FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ + K EY PT IQ QA+P +SGRD++
Sbjct: 383 CGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVV 419
Score = 136 (52.9 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 41/108 (37%), Positives = 57/108 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQV I +VRP+RQT+LFSAT K ++ L + VL +P++I G ++ITQ+V
Sbjct: 546 EPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEI 605
Query: 160 LPQTQKLTWLTHNLVEFLSTGS---LLIFVTK--KCFELVN-LIAKNY 201
+ K L L E LIFV + K EL+ L+ K Y
Sbjct: 606 RDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLRELLRKGY 653
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 170 (64.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EK+FY+ H D+ + +E E R K +TV G D P PV +F GF + ++ ++ +
Sbjct: 101 EKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGF 160
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ+Q P ALSGRD++
Sbjct: 161 EKPTAIQSQGWPMALSGRDVV 181
Score = 135 (52.6 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 34/108 (31%), Positives = 60/108 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I +RP+RQT ++SAT+ K + +LA D L + I++ G + AN ITQ+V
Sbjct: 305 EPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVE 364
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKKCF-ELVNLIAKNYW 202
+ + +K + +L + + L+F TK+ E+ + ++ W
Sbjct: 365 VISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGW 412
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 159 (61.0 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 41/114 (35%), Positives = 66/114 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K +++LA D L DPI++ G + A+ +ITQ+V
Sbjct: 278 EPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVE 337
Query: 159 NLPQTQKLTWLTHNLVEFLSTGS---LLIFVTKK--CFELVNLIAKNYWLIQAV 207
+ +K L L E S + LIF + K C ++ + ++ W A+
Sbjct: 338 VVSDFEKRDRLNKYL-ETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAI 390
Score = 158 (60.7 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY HE + + E + R ++ +T+SG D P P+++F GF + ++ ++ +
Sbjct: 74 EKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGF 133
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQ Q P ALSGRD++
Sbjct: 134 DKPTGIQCQGWPMALSGRDMV 154
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 159 (61.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFY + ++ ++ + +E R K ITV G+ P PV++F F + +M L + +
Sbjct: 56 EKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNF 115
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PT IQAQ P ALSGRD++
Sbjct: 116 KEPTAIQAQGFPLALSGRDMV 136
Score = 159 (61.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 41/108 (37%), Positives = 63/108 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D ++I G + AN +I Q+V
Sbjct: 260 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVD 319
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYW 202
+ +K L + E ++ +IFV TKK C EL + ++ W
Sbjct: 320 VCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGW 367
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 161 (61.7 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EK+FY+ H D+ + E + R + + V G+D P PV +F GF +M ++ +
Sbjct: 86 EKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGF 145
Query: 79 TSPTPIQAQAVPAALSGRDII 99
+PT IQ+Q P ALSGRD++
Sbjct: 146 PAPTAIQSQGWPMALSGRDVV 166
Score = 147 (56.8 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 37/110 (33%), Positives = 64/110 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I +RP+RQTL++SAT+ K + +A D L D I++ G + AN ITQ+V
Sbjct: 290 EPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVE 349
Query: 159 NLPQTQKLTWLTHNLVEFL----STGSLLIFV-TKKCF-ELVNLIAKNYW 202
+ +++K + ++ + + S +LIFV TK+ E+ + ++ W
Sbjct: 350 VVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGW 399
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 152 (58.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +RP+RQT+LFSATF +++E LA+ +LTDP+ I+ G I +I Q V+
Sbjct: 463 EPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVV 521
Score = 150 (57.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L IDHS Y+E K FY+ +++ L+ ++ + +R I V G D P P+ + H
Sbjct: 239 LQSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHL 298
Query: 64 GFDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDII 99
L + K ++ P+ IQ+QA+P LSGRD+I
Sbjct: 299 ALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVI 335
Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAKSG-ITV 48
EEV+K+ Q E+ R Q+ Q + K+ IT+
Sbjct: 75 EEVKKSRQQRIEEWKRARLQKQQATKEKTTTITI 108
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 152 (58.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
EPQV I +RP+RQT+LFSATF +++E LA+ +LTDP+ I+ G I +I Q V+
Sbjct: 463 EPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVV 521
Score = 150 (57.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L IDHS Y+E K FY+ +++ L+ ++ + +R I V G D P P+ + H
Sbjct: 239 LQSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHL 298
Query: 64 GFDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDII 99
L + K ++ P+ IQ+QA+P LSGRD+I
Sbjct: 299 ALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVI 335
Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAKSG-ITV 48
EEV+K+ Q E+ R Q+ Q + K+ IT+
Sbjct: 75 EEVKKSRQQRIEEWKRARLQKQQATKEKTTTITI 108
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 156 (60.0 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 64
LP I S + KNFY+P + + T E + + IT+ G P P F G
Sbjct: 104 LPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGG 163
Query: 65 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F + +M +RK + PT IQAQ P A+SGRD++
Sbjct: 164 FPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLV 198
Score = 140 (54.3 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I +RP+RQ L++SAT+ K + +LA + L + I++ G + AN +I Q+V
Sbjct: 322 EPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVD 381
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSL--LIFV-TKKCF-ELVNLIAKNYWLIQAV 207
+ +KL L L + + +IFV TKK E+ I++ W A+
Sbjct: 382 VCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAI 434
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 146 (56.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 20 KNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYT 79
K+FY H + + Q+ E+R + ITVSG + P+PV SF +++ +++ +T
Sbjct: 199 KDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFT 258
Query: 80 SPTPIQAQAVPAALSGRDII 99
PT IQ+Q P ALSGRD++
Sbjct: 259 KPTAIQSQGWPIALSGRDLV 278
Score = 140 (54.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 38/113 (33%), Positives = 68/113 (60%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV- 157
EPQ+R I + +RP+RQ +++SAT+ K ++ LA D L D I+I G + AN +I Q+V
Sbjct: 404 EPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVE 463
Query: 158 --INLPQTQKLTWLTHNLVEFLSTGS----LLIFV-TK-KCFELVNLI-AKNY 201
+ + Q+L L + + ++G+ +++FV TK K +++ +I A+ Y
Sbjct: 464 ICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGY 516
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 156 (60.0 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 37/107 (34%), Positives = 63/107 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGE--ANTDITQVV 157
EPQ+R I + + P RQTL+++AT+ K + K+A D+L +P+++ G + E AN ITQ V
Sbjct: 599 EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYV 658
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS-LLIFVTKK--CFELVNLIAKNY 201
+PQ +K L ++ GS ++IF + K C L + +++
Sbjct: 659 EVVPQMEKERRL-EQILRSQERGSKVIIFCSTKRLCDHLARSVGRHF 704
Score = 119 (46.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 20 KNFYQPH----EDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 75
K+ +PH D+ L+P E R + +T +G + P P +F G +++ L
Sbjct: 395 KSLVRPHFVTSPDVPHLSPVEIY--RKQHEVTTTGENIPAPYITFESSGLPPEILRELLS 452
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+ SPTPIQAQ P AL RDI+
Sbjct: 453 AGFPSPTPIQAQTWPIALQSRDIV 476
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 137 (53.3 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y E +++P + +++ ++ +R + ITV+G D P P+ +F F L++
Sbjct: 52 ITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRM 111
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+ PTPIQ Q +P LSGRD+I
Sbjct: 112 LKDKGIMHPTPIQVQGLPVVLSGRDMI 138
Score = 136 (52.9 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R + DH + RQTLLFSAT +I+ A L P+ + G G AN D+ Q V
Sbjct: 271 EDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEY 330
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ Q K+ +L L + +T +LIF K
Sbjct: 331 VKQEAKIVYLLECLQK--TTPPVLIFCENK 358
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 158 (60.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y H I+ L + + LR + GI V G P P+ FGH GF E L L+ Y PT
Sbjct: 156 YTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPT 215
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRD++
Sbjct: 216 PIQMQMIPVGLLGRDLL 232
Score = 97 (39.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV + ++V + QT+L SAT RIE+LA +L DP++++ G+ + Q+V+
Sbjct: 352 QEQVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIVLW 411
Query: 160 LPQTQKLTWLTHNLVEF-LSTGSLLIFVTKK 189
+ + K L L + L +L+FV K
Sbjct: 412 VEEPAKKKKLFEILNDKKLFKPPVLVFVDCK 442
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 136 (52.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 40/108 (37%), Positives = 59/108 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E VR+I + RQTLLFSAT K+I+ AR L P+ I G G A+ ++TQ V
Sbjct: 351 EEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEY 410
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQAV 207
+ Q K+ +L L + + +LIF KK + V+ I + Y L++ V
Sbjct: 411 VKQEAKVVYLLDCLQK--TAPPVLIFAEKK--QDVDCIHE-YLLLKGV 453
Score = 133 (51.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I YE+ K ++P I ++ +E + +R + I V G P P+ SF F + ++
Sbjct: 132 IQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNG 191
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L +PTPIQ Q +P L+GRD+I
Sbjct: 192 LAAKGIKNPTPIQVQGLPTVLAGRDLI 218
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 138 (53.6 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 196 LKKKGILHPTPIQIQGIPTILSGRDMI 222
Score = 130 (50.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 355 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 414
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 415 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 442
Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 544
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 137 (53.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMI 222
Score = 130 (50.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 355 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 414
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 415 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 442
Score = 37 (18.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 544
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 137 (53.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMI 222
Score = 130 (50.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 355 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 414
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 415 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 442
Score = 37 (18.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 544
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 137 (53.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMI 222
Score = 130 (50.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 355 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 414
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 415 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 442
Score = 37 (18.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 544
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 137 (53.3 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 154 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 213
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 214 LKKKGIHHPTPIQIQGIPTILSGRDMI 240
Score = 130 (50.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 373 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 432
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 433 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 460
Score = 37 (18.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 504 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 562
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 137 (53.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 163 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 222
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 223 LKKKGIHHPTPIQIQGIPTILSGRDMI 249
Score = 130 (50.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 382 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 441
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 442 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 469
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 513 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 571
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 132 (51.5 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L PI I G G A+ D+ Q V
Sbjct: 206 EEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEY 265
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 266 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 293
Score = 128 (50.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 38 QELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRD 97
+ +R K I V G P P+ SF F + ++K L+K PTPIQ Q +P LSGRD
Sbjct: 17 ERVRKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRD 76
Query: 98 II 99
+I
Sbjct: 77 MI 78
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 139 (54.0 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R + DH + RQTLLFSAT +I+ AR L P+ + G G AN D+ Q V
Sbjct: 320 EDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEY 379
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ Q K+ +L L + ++ +LIF K
Sbjct: 380 VKQEAKIVYLLECLQK--TSPPVLIFCENK 407
Score = 121 (47.7 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y E ++P I +++ ++ +R + I V+G D P P+ +F F ++
Sbjct: 101 ITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDT 160
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L++ PTPIQ Q +P L+GRD+I
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMI 187
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 132 (51.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L PI I G G A+ D+ Q V
Sbjct: 351 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEY 410
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 411 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 438
Score = 130 (50.8 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K ++ I ++ +R K I V G P P+ SF F +++
Sbjct: 132 ITYDDPIKTSWRAPRYILAMSEARHNRVRKKYHILVEGEGIPPPIKSFKEMKFPAAILRG 191
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 192 LKKKGIQQPTPIQIQGIPTILSGRDMI 218
Score = 38 (18.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 125 KRIEKLARDVLTDPIKIVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---ST 179
K IE RD D + V D+ D + VIN +++ H + +T
Sbjct: 469 KAIEAF-RDGKKDVL--VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNT 525
Query: 180 GSLLIFVTKKCFELV 194
G F+ K C E V
Sbjct: 526 GIATTFINKACDESV 540
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 132 (51.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF +++
Sbjct: 135 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRG 194
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 195 LKKKGILHPTPIQIQGIPTILSGRDMI 221
Score = 130 (50.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 354 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 413
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 414 VKEEAKMVYLLECLQK--TPPPVLIFAKKK 441
Score = 37 (18.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 485 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 543
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 132 (51.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 13 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 72
I Y++ K + P + ++ + + +R K I V G P P+ SF +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRG 195
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K PTPIQ Q +P LSGRD+I
Sbjct: 196 LKKKGILHPTPIQIQGIPTILSGRDMI 222
Score = 130 (50.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +R+I + + RQTLLFSAT K+I+ A+ L P+ I G G A+ D+ Q V
Sbjct: 355 EGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEY 414
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + K+ +L L + + +LIF KK
Sbjct: 415 VKEEAKMVYLLECLQK--TPPPVLIFAEKK 442
Score = 37 (18.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 141 IVQGDIGEANTDITQV--VINLPQTQKLTWLTHNLVEFL---STGSLLIFVTKKCFELV 194
+V D+ D + VIN +++ H + +TG F+ K C E V
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV 544
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 161 (61.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 22 FYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSP 81
FY+ H I L ++ + L+ + GI + G P P+ F H GF E L L+ Y P
Sbjct: 173 FYKDHSFILSLQDEQVENLKLQLGIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVP 232
Query: 82 TPIQAQAVPAALSGRDII 99
TPIQ Q +P L GRDI+
Sbjct: 233 TPIQMQMIPVGLLGRDIV 250
Score = 76 (31.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV I + + + QT+L SAT IE LA +L + ++I G+ +++ Q+++
Sbjct: 370 QQQVLDILEDISHDHQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLPCSNVRQIILW 429
Query: 160 LPQTQKLTWLTHNLVEF-LSTGSLLIFVTKK 189
+ + K L L + L +L+FV K
Sbjct: 430 VEEPSKKKKLFEILNDKKLFKPPVLVFVDCK 460
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 201 (75.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHF 63
L P+DH I YE KNFY ++A+++ +E R + GITV G P P+ S+
Sbjct: 270 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 329
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G ++ +L+K Y PTPIQ QA+PA +SGRD+I
Sbjct: 330 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 365
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 156 (60.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI+V G D P+ F H GF E L + L+K Y PT
Sbjct: 168 YKEHPFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRDI+
Sbjct: 228 PIQMQMIPVGLLGRDIL 244
Score = 90 (36.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
+ QV + +H + QT+L SAT IE+L +L +P++I+ GD + Q+++
Sbjct: 364 QQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQIIL 422
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 147 (56.8 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI V G D P+ F H GF E L L+ Y PT
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPT 228
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRD++
Sbjct: 229 PIQMQMIPVGLLGRDVL 245
Score = 101 (40.6 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV I +HV + QT+L SAT IE+LA +L +P++I+ G+ + + Q+++
Sbjct: 365 QQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILW 424
Query: 160 LPQTQKLTWLTHNLVEF-LSTGSLLIFVTKK 189
+ + K L L + L +L+FV K
Sbjct: 425 VEEPAKKKKLFEILNDKKLFKPPVLVFVDCK 455
>RGD|1359520 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1359520 GO:GO:0005524
GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 152 (58.6 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI+V G + P+ F H GF E L + L+K Y PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRDI+
Sbjct: 228 PIQMQMIPVGLLGRDIL 244
Score = 93 (37.8 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
+ QV + +H + QT+L SAT I++LA +L +P++IV GD + + Q+++
Sbjct: 334 QQQVLDVLEHTPSDCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCSSVRQIIL 392
>UNIPROTKB|Q66HG7 [details] [associations]
symbol:Ddx59 "Probable ATP-dependent RNA helicase DDX59"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1359520
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 152 (58.6 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI+V G + P+ F H GF E L + L+K Y PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRDI+
Sbjct: 228 PIQMQMIPVGLLGRDIL 244
Score = 93 (37.8 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
+ QV + +H + QT+L SAT I++LA +L +P++IV GD + + Q+++
Sbjct: 334 QQQVLDVLEHTPSDCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCSSVRQIIL 392
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 128 (50.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 33/107 (30%), Positives = 59/107 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGE--ANTDITQVV 157
EPQ+R I + RQTL+++AT+ K + K+A D+L +P ++ G++ E AN ITQ +
Sbjct: 322 EPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHI 381
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS-LLIFVTKK--CFELVNLIAKNY 201
+ +K L ++ GS ++IF + K C +L + + +
Sbjct: 382 EVVAPMEKQRRL-EQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQF 427
Score = 127 (49.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 30 ARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 89
+ L+P EA R + ITVSG P P+ SF GF L++ + +++PTPIQAQ+
Sbjct: 133 SELSP-EAYSRRHE--ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSW 189
Query: 90 PAALSGRDII 99
P A+ GRDI+
Sbjct: 190 PIAMQGRDIV 199
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 147 (56.8 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI V G D P+ F H GF E L L+ Y PT
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPT 228
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRD++
Sbjct: 229 PIQMQMIPVGLLGRDVL 245
Score = 101 (40.6 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV I +HV + QT+L SAT IE+LA +L +P++I+ G+ + + Q+++
Sbjct: 365 QQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILW 424
Query: 160 LPQTQKLTWLTHNLVEF-LSTGSLLIFVTKK 189
+ + K L L + L +L+FV K
Sbjct: 425 VEEPAKKKKLFEILNDKKLFKPPVLVFVDCK 455
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 146 (56.5 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFD-EVLMKAL 73
E +KNFY E ++ ++ E +ELR I + G P PV+ + G + ++
Sbjct: 212 EPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLIT 271
Query: 74 RKCEYTSPTPIQAQAVPAALSGRDII 99
K + S TPIQ+QA+PA +SGRD+I
Sbjct: 272 EKLHFGSLTPIQSQALPAIMSGRDVI 297
Score = 106 (42.4 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+ I VRP++Q +LFSATF ++ A VL PI I G N ++ Q
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVKQ 481
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 157 (60.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y H ++ L + + LR + GITV G P P+ F H GF E L + L+ Y PT
Sbjct: 169 YTEHAFVSHLREDQIENLRRQLGITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPT 228
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRD++
Sbjct: 229 PIQMQMIPVGLLGRDVL 245
Score = 81 (33.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV + + + + QT+L SAT +E+LA +L DP+ I G+ + Q+V+
Sbjct: 365 QQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAITAGERNLPCPSVRQIVLW 424
Query: 160 LPQTQKLTWLTHNLVEF-LSTGSLLIFVTKK 189
+ + K L L + L +L+FV K
Sbjct: 425 VEEPAKKKKLFEILNDKKLFKPPVLVFVDCK 455
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 143 (55.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 44/110 (40%), Positives = 64/110 (58%)
Query: 100 EPQVRSI---CDHVRP--NRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDIT 154
EPQ+R I CD + P RQTL+FSATF I+ LARD L+D I + G +G + +IT
Sbjct: 317 EPQIRHIVEDCD-MTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENIT 375
Query: 155 QVVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKKCFELVN--LIAKNY 201
Q V+ + K + L +L+ + G LIFV TK+ + + LI +N+
Sbjct: 376 QKVLYVENQDKKSALL-DLLSASTDGLTLIFVETKRMADQLTDFLIMQNF 424
Score = 104 (41.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ SG D P P++ F D +L++ ++ +T PTP+Q +VP +GRD++
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLM 183
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 89 VPAALSGRDIIEP 101
+P SG+D+ EP
Sbjct: 128 IPVDASGKDVPEP 140
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 134 (52.2 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 42/109 (38%), Positives = 61/109 (55%)
Query: 100 EPQVRSI---CDHVR-PNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I CD NRQTL+FSATF I+ LARD L + I + G +G + +ITQ
Sbjct: 329 EPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQ 388
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKKCFELVN--LIAKNY 201
++ + K + L +L+ G LIFV TK+ + + LI +N+
Sbjct: 389 RILYVDDMDKKSALL-DLLSAEHKGLTLIFVETKRMADQLTDFLIMQNF 436
Score = 111 (44.1 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ SG D P P+ F DE+LM+ ++ +T PTP+Q ++P GRD++
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLM 195
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 134 (52.2 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +RS+ D+ RQTLLFSAT K+I++ AR L P+++ G G AN ++TQ V
Sbjct: 397 EDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEF 456
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ K+ +L L + + +LIF K
Sbjct: 457 VKPEAKIVYLLECLQK--TPPPVLIFCENK 484
Score = 110 (43.8 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 13 IVY-EEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 71
++Y + ++ N+ P + R ++ Q++R + I G D P P+++F + ++
Sbjct: 177 VIYTDSIKTNWRAPRYILER-DEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVID 235
Query: 72 ALRKCEYTSPTPIQAQAVPAALSGRDII 99
L + P+PIQ Q +P LSGRD+I
Sbjct: 236 VLLEKGIKKPSPIQVQGLPVILSGRDMI 263
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 135 (52.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 34/89 (38%), Positives = 47/89 (52%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
P +R + H+ P RQTLLFSAT I LA+D+L DP+ + G + A T + + +
Sbjct: 163 PDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVT-VAHALYPV 221
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
Q K T L L+ T S+LIF K
Sbjct: 222 EQHLK-TPLLLELLRHTDTESVLIFTRTK 249
Score = 102 (41.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F FGF + + Y +PTPIQAQA+PA ++GRD++
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVM 42
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 57/195 (29%), Positives = 96/195 (49%)
Query: 25 PHEDIARLTPQEAQELRAKSGIT---VSGADPPYPVSSFGHFGFDEVLMKALR-----KC 76
P ++A +E+++ +SG+ + G P P G + V+ R +C
Sbjct: 246 PTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEC 305
Query: 77 EYTSPTPIQAQAVPAALSGRDI-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVL 135
++T+ + + A D+ EPQ+R I +RP+RQTLL+SAT+ + +E LAR L
Sbjct: 306 QHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 365
Query: 136 TDPIKIVQGDIG-EANTDITQVVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK-CFE 192
DP K + G +AN I QV+ +P +K L L + + +LIFV TK+ C +
Sbjct: 366 RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQ 425
Query: 193 LVNLIAKNYWLIQAV 207
+ + + W A+
Sbjct: 426 VTRQLRMDGWPALAI 440
Score = 166 (63.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 64
LP + +V+ EKNFY + +T Q+ R + I+V G D P P+ F
Sbjct: 114 LPKQNFGNLVH--FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDAN 171
Query: 65 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F + +++A+ K +T PTPIQAQ P AL GRD+I
Sbjct: 172 FPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLI 206
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 144 (55.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 41/96 (42%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P RQT++FSATF K I+ LARD L D I + G +G + +ITQ
Sbjct: 390 EPQIRRIVEQDTMPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQ 449
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 450 KVVWVEENDKRSFLL-DLLNATGKDSLTLVFVETKK 484
Score = 94 (38.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G + P P+ F E++M + YT PTP+Q A+P S RD++
Sbjct: 196 VEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLM 249
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 135 (52.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/108 (37%), Positives = 57/108 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ++ I +RP+RQTL+FSAT+ K + LA D D + G + AN +ITQVV
Sbjct: 294 EPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVD 353
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSL--LIFV-TK-KCFELVNLIAKNYW 202
L + K L L ++ +IFV TK K EL + ++ W
Sbjct: 354 ILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGW 401
Score = 103 (41.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 64
L +D S +EK+FY + ++R E + + + +T+ G P PV F
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 65 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ + L ++ PT IQ+ + P A+SGRDII
Sbjct: 137 LPGQIHELLYG-KFQKPTVIQSISWPIAMSGRDII 170
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 136 (52.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 39/94 (41%), Positives = 52/94 (55%)
Query: 100 EPQVRSICD-HVRPN---RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I + PN RQTL+FSATF + I+ LARD L D + + G +G + +ITQ
Sbjct: 363 EPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQ 422
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
V + K + L L +TG LIFV K
Sbjct: 423 KVEYVEDHDKRSVLLDILHTHGTTGLTLIFVETK 456
Score = 103 (41.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ SG D P PV++F + D+ L+ + Y +PTP+Q ++P ++GRD++
Sbjct: 174 VEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLM 227
Score = 36 (17.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 89 VPAALSGRDIIEP 101
+P SG D+ EP
Sbjct: 172 IPVEASGHDVPEP 184
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPIQAQAVPAALSGRDII 99
T PT IQAQ P ALSG D++
Sbjct: 115 TEPTAIQAQGWPVALSGLDMV 135
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 142 (55.0 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 39/109 (35%), Positives = 61/109 (55%)
Query: 100 EPQVRSICDHVR----PNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I + RQTL+FSATF + I+ LARD L D + + G +G + +ITQ
Sbjct: 347 EPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQ 406
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKKCFELVN--LIAKNY 201
V+++ ++K ++L L G LIFV TK+ + + L+ N+
Sbjct: 407 KVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNF 455
Score = 91 (37.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D PV+ F + L++ ++ YT PTP+Q ++P SGRD++
Sbjct: 158 VEVSGGDIE-PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLM 210
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 143 (55.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 40/96 (41%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ T SL L+FV TKK
Sbjct: 418 KVVWVEEADKRSFLL-DLLNATGTDSLTLVFVETKK 452
Score = 90 (36.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ V+G + P + SF E++M + YT PTP+Q A+P RD++
Sbjct: 168 VEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 141 (54.7 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI V G + P+ F H EVL L+K Y PT
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRDI+
Sbjct: 228 PIQMQMIPVGLLGRDIL 244
Score = 89 (36.4 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
+ QV I +++ + QT+L SAT IE+LA +L +P++I+ G+ ++ Q+++
Sbjct: 364 QQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIIL 422
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 141 (54.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 82
Y+ H I L + + L+ + GI V G + P+ F H EVL L+K Y PT
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 83 PIQAQAVPAALSGRDII 99
PIQ Q +P L GRDI+
Sbjct: 228 PIQMQMIPVGLLGRDIL 244
Score = 89 (36.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
+ QV I +++ + QT+L SAT IE+LA +L +P++I+ G+ ++ Q+++
Sbjct: 364 QQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIIL 422
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 15 YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALR 74
YEE ++P I R + ++ + R + GI+ G P P+ SF F + L++ ++
Sbjct: 146 YEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQ 205
Query: 75 KCE-YTSPTPIQAQAVPAALSGRDII 99
K + +PT IQ Q +P ALSGRD+I
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMI 231
Score = 111 (44.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +++SI + RQTLLFSAT ++I+ A+ L PI + G G A+ ++ Q +
Sbjct: 364 EDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEF 423
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQAVGI 209
+ KL + L + ++ +LIF KK ++ N+ Y L++ V +
Sbjct: 424 VRSENKLVRVLECLQK--TSPKVLIFAEKKV-DVDNIY--EYLLVKGVEV 468
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 127 IEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
I + A+DV D I IV G + +T+ +INL
Sbjct: 312 IGEQAKDV-RDGIHIVVATPGRLSDMLTKKIINL 344
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 118 (46.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 100 EPQVRSICDHV----RPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I + + R RQT+LFSATF +I++LA D +++ I + G +G + ITQ
Sbjct: 321 EPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQ 380
Query: 156 VVINLPQTQK---LTWLTHNLVEFLSTGSL-LIFV-TKKCFE-LVNLIAKN 200
V + ++ K L L H E SL L+FV TK+ + L N + N
Sbjct: 381 RVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMN 431
Score = 116 (45.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ SG D P PV++F + L +R+C+Y PTP+Q A+P L+ RD++
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLM 192
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 127 (49.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 28/92 (30%), Positives = 51/92 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQ+R + +RP+RQT++ SAT+ + +LA+ + +PI++ G + A T + +I
Sbjct: 448 EPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIK 507
Query: 160 LPQTQ--KLTWLTHNLVEFLSTGSLLIFVTKK 189
L + K +T + ST ++IF +K
Sbjct: 508 LMEDDMDKFNTITSFVKNMSSTDKIIIFCGRK 539
Score = 106 (42.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 20 KNFYQPHEDIARLTPQEAQELRAKSG-ITVS-------G-ADPPYP--VSSFGH-FGFDE 67
KNFY+ ++A LT E + +R ++ ITVS G PP P V +F F
Sbjct: 233 KNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYP 292
Query: 68 VLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+++ + K ++ P+PIQ+QA P L G D+I
Sbjct: 293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMI 324
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 142 (55.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 75
E + Y+ I+ LT ++ + ++A+ GI G + PV F H F VL + L+
Sbjct: 128 ENTKSYSYKQDAFISELTEEQIERVKAELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKA 187
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
Y +PTP+Q Q VP L+GRD+I
Sbjct: 188 AGYEAPTPVQMQMVPVGLTGRDVI 211
Score = 83 (34.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+ QV I + V + QTLL SAT ++LA + DP+ I G + ++ Q+V+
Sbjct: 335 QQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCANVRQIVLW 394
Query: 160 LPQTQKLTWLTHNLV-EFLSTGSLLIFVTKK 189
+ + K L L E L +++FV K
Sbjct: 395 VEEPSKKKKLFEILNDEKLYQPPVVVFVDCK 425
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 128 (50.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 100 EPQVRSI---CDHVR-PNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I CD +RQTL+FSATF + I+ LARD L D + + G +G + +ITQ
Sbjct: 361 EPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQ 420
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
++ + +K + + +L+ G ++F K
Sbjct: 421 KILYVEDDEKKSVIL-DLLSANENGLTIVFTETK 453
Score = 103 (41.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ SG P P++SF DE+L++ ++ +T PTP+Q +VP +GRD++
Sbjct: 174 VEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLM 227
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 141 (54.7 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 40/96 (41%), Positives = 59/96 (61%)
Query: 100 EPQVRSIC--DHVRP--NRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P +RQT++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 406 EPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQ 465
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 466 KVVWVEENDKRSFLL-DLLNATGKDSLTLVFVETKK 500
Score = 86 (35.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G + P + SF E++M + YT PTP+Q A+P + RD++
Sbjct: 211 VEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLM 264
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 122 (48.0 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
I SG + P PV++F E L +R+C+Y PTP+Q A+P L GRD++
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLM 200
Score = 107 (42.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 100 EPQVRSICDHV----RPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDI 153
EPQ+R I + + R RQTLLFSATF + I++LA D L + I + G +G ++TD+
Sbjct: 329 EPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVG-SSTDL 385
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 136 (52.9 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 335 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 394
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 395 KVVWVEELDKRSFLL-DLLNATGKDSLTLVFVETKK 429
Score = 88 (36.0 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G++ P + SF E++M + YT PTP+Q A+P RD++
Sbjct: 144 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 197
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 136 (52.9 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 336 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 395
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 396 KVVWVEELDKRSFLL-DLLNATGKDSLTLVFVETKK 430
Score = 88 (36.0 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G++ P + SF E++M + YT PTP+Q A+P RD++
Sbjct: 146 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 199
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 138 (53.6 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 359 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 418
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + ++ K ++L +L+ SL L+FV TKK
Sbjct: 419 KVVWVEESDKRSFLL-DLLNATGKDSLTLVFVETKK 453
Score = 85 (35.0 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G + P + SF E++M + YT PTP+Q A+P RD++
Sbjct: 169 VEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 222
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 138 (53.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 416
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + ++ K ++L +L+ SL L+FV TKK
Sbjct: 417 KVVWVEESDKRSFLL-DLLNATGKDSLTLVFVETKK 451
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 175 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 220
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 138 (53.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + ++ K ++L +L+ SL L+FV TKK
Sbjct: 418 KVVWVEESDKRSFLL-DLLNATGKDSLTLVFVETKK 452
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 138 (53.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + ++ K ++L +L+ SL L+FV TKK
Sbjct: 418 KVVWVEESDKRSFLL-DLLNATGKDSLTLVFVETKK 452
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 138 (53.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + ++ K ++L +L+ SL L+FV TKK
Sbjct: 418 KVVWVEESDKRSFLL-DLLNATGKDSLTLVFVETKK 452
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 123 (48.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQG--DIGEANTDITQVV 157
EPQ+ I VRP+RQT++ SAT+ + +LA+ L +P+ + G D+ NT + Q V
Sbjct: 404 EPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNT-VEQKV 462
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
I + + +K ++ + + +IFV KK
Sbjct: 463 IVINEEEKKAFMENFIDSMKPKDKAIIFVGKK 494
Score = 102 (41.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITV-----SGADP--PYPVSSFGHFGFDEV-- 68
+EKNFY+ A ++P+E + R ++ + G P PV F F++
Sbjct: 192 IEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDV-FEQYPD 250
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+M +RK + PTPIQ+QA P L G D+I
Sbjct: 251 IMANIRKTGFQKPTPIQSQAWPIILQGIDLI 281
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 415
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 416 KVVWVEEADKRSFLL-DLLNATGKDSLILVFVETKK 450
Score = 84 (34.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 174 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 219
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 137 (53.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 416
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 417 KVVWVEEADKRSFLL-DLLNATGKDSLILVFVETKK 451
Score = 84 (34.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 175 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 220
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 136 (52.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 418 KVVWVEEIDKRSFLL-DLLNATGKDSLTLVFVETKK 452
Score = 84 (34.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 136 (52.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 418 KVVWVEEIDKRSFLL-DLLNATGKDSLTLVFVETKK 452
Score = 84 (34.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 221
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 136 (52.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 400 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 459
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTG--SL-LIFV-TKK 189
V+ + ++ K ++L +L+ +G SL L+FV TKK
Sbjct: 460 KVVWVEESDKRSFLL-DLLNATESGKDSLTLVFVETKK 496
Score = 84 (34.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + SF E++M + YT PTP+Q A+P RD++
Sbjct: 218 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 263
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 133 (51.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 353 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 412
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK 189
V+ + K ++L L S L+FV TKK
Sbjct: 413 KVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK 447
Score = 86 (35.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G++ P + +F E++M + YT PTP+Q A+P RD++
Sbjct: 163 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLM 216
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 136 (52.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 351 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 410
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 411 KVVWVEELDKRSFLL-DLLNATGRDSLTLVFVETKK 445
Score = 82 (33.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIE-PQVRSIC 107
PP+ + +F E++M + YT PTP+Q A+P RD++ Q S C
Sbjct: 169 PPH-IENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGC 223
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 133 (51.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 415
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK 189
V+ + K ++L L S L+FV TKK
Sbjct: 416 KVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK 450
Score = 86 (35.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G++ P + +F E++M + YT PTP+Q A+P RD++
Sbjct: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLM 219
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 136 (52.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 416
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK 189
V+ + + K ++L +L+ SL L+FV TKK
Sbjct: 417 KVVWVEELDKRSFLL-DLLNATGKDSLTLVFVETKK 451
Score = 82 (33.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 53 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
PP+ + +F E++M + YT PTP+Q A+P RD++
Sbjct: 175 PPH-IENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLM 220
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 132 (51.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 38/101 (37%), Positives = 58/101 (57%)
Query: 100 EPQVRSICDHVR--P--NRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I + + P RQTL+FSATF K+I++LA D L++ I + G +G + +ITQ
Sbjct: 470 EPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQ 529
Query: 156 VVINLPQTQKLTWLTHNLV------EFLSTGSLLIFV-TKK 189
++ + + K ++L L E+ LIFV TKK
Sbjct: 530 TILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKK 570
Score = 89 (36.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G + P ++SF E++ + Y PTP+Q A+P ++GRD++
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLM 336
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 113 (44.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + +++LA + L TD I +V G+ A +D+ Q ++ +P+ K
Sbjct: 351 KDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSK---- 406
Query: 170 THNLVEFL-STGS--LLIFV-TKK 189
L+E L STG ++FV TKK
Sbjct: 407 RDKLIEILQSTGGERTMVFVDTKK 430
Score = 107 (42.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +SG DPP P+ +F F + L K + K Y+ TP+Q ++P +GRD++
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLM 208
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 113 (44.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + +++LA + L TD I +V G+ A +D+ Q ++ +P+ K
Sbjct: 351 KDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSK---- 406
Query: 170 THNLVEFL-STGS--LLIFV-TKK 189
L+E L STG ++FV TKK
Sbjct: 407 RDKLIEILQSTGGERTMVFVDTKK 430
Score = 107 (42.7 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +SG DPP P+ +F F + L K + K Y+ TP+Q ++P +GRD++
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLM 208
>SGD|S000003139 [details] [associations]
symbol:ROK1 "RNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
Length = 564
Score = 125 (49.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 36 EAQELRAKSGITVSGADPPYPVSSF----GHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
EA LR VSG D P P+ SF F FD+ L+ L + +T PTPIQ + +P
Sbjct: 96 EASALRKSYKGNVSGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPV 155
Query: 92 ALSGRDII 99
AL+ RD++
Sbjct: 156 ALNNRDVL 163
Score = 92 (37.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 112 PNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
P+ + +FSAT +E++A+ ++ DP++++ G ANT+I Q +I
Sbjct: 304 PSLRKAMFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLI 350
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 117 (46.2 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 27 EDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 86
++++ ++ ++ + R I++ G P P+ ++ GF + + +A+++ Y PTPIQ
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQR 329
Query: 87 QAVPAALSGRDII 99
QA+P L RD+I
Sbjct: 330 QAIPIGLQNRDVI 342
Score = 103 (41.3 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT IE+LAR L P + G G+ + QVV +P+ +K L +
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVE-V 567
Query: 174 VEFLSTGSLLIFVTKK 189
+E ++IFV +K
Sbjct: 568 LESQFQPPIIIFVNQK 583
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 121 (47.7 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R IT G P P+ ++ + +++ + KC Y PTPIQ QA+P
Sbjct: 352 MTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPI 411
Query: 92 ALSGRDII 99
L RDII
Sbjct: 412 GLQNRDII 419
Score = 99 (39.9 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G G+ + + Q VI + + +K L
Sbjct: 587 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVILMSEGEK----RKKL 642
Query: 174 VEFLSTG---SLLIFVTKK--CFELVNLIAK 199
+E L++G ++IFV +K C L + K
Sbjct: 643 LEVLASGFEPPIIIFVNQKKGCDVLAKSLEK 673
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 114 (45.2 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
I SG + P PV++F E L +++C+Y PTP+Q A+P +GRD++
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLM 187
Score = 105 (42.0 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 39/101 (38%), Positives = 53/101 (52%)
Query: 100 EPQVRSIC---DHVRPN-RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D P RQT+LFSATF + I++LA D L++ I + G +G + I Q
Sbjct: 316 EPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQ 375
Query: 156 VVINLPQTQK---LTWLTHNLVEFLSTGS---LLIFV-TKK 189
V + + K L L H E + G L+FV TKK
Sbjct: 376 RVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKK 416
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 96 RDIIEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLT-DPIKIVQGDIGEANTDIT 154
R+ IE ++S + RQTL+FSATF I+ LAR++L D + +V G +G A +D+
Sbjct: 455 REDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVE 514
Query: 155 QVVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
Q+VI + + K L L E S +++ TKK
Sbjct: 515 QMVIEVDEFGKKDKLMEILQEIGSERTMVFVKTKK 549
Score = 88 (36.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 1 YIDPLPPIDHSTIV-YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSS 59
YI P PP + S I + + NF ++DI + VSG+D P + +
Sbjct: 244 YIPPPPPAEESDIFKHYQTGINF-DKYDDIV---------------VEVSGSDVPPAILT 287
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F + L K + K Y TPIQ ++P ++GRD++
Sbjct: 288 FEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLM 327
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 123 (48.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/109 (37%), Positives = 59/109 (54%)
Query: 100 EPQVRSICDHV-RP---NRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I P +RQTL+FSATF K+I+ LA D L + I + G +G +ITQ
Sbjct: 422 EPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTTQ-NITQ 480
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK-CFELVNLI-AKNY 201
+ + + K ++L L S G LIFV TK+ C L + +N+
Sbjct: 481 RIEYVVEEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNF 529
Score = 93 (37.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 56 PVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
P++SF +VL+ ++ +YT PTP+Q A+P L RD++
Sbjct: 245 PLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLM 288
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 122 (48.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVIN 159
PQ+ S+ D + RQTL+FSAT+ K ++ LA L DPIKI G + ++TQ ++N
Sbjct: 275 PQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVN 334
Query: 160 LPQTQKL 166
+ L
Sbjct: 335 IDDLSDL 341
Score = 91 (37.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 75
EEV++ + EDI L+P E R K + + G P P F + F + +
Sbjct: 77 EEVKE---ETKEDIV-LSPTE---WRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQG 129
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+T+PT IQ Q+ P L G D++
Sbjct: 130 --FTAPTVIQGQSWPIILGGNDLV 151
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 117 (46.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
P + IC + NRQTLLFSATF I++LA+ DP KI + I+Q V+ L
Sbjct: 168 PDIEKICAKLPANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKL 227
Query: 161 PQTQKLTWLT--HNLVEFLSTGSLLIFVTKK 189
P T ++E + + ++F +K
Sbjct: 228 PTNDGKARRTALRRVIEATNVKNGIVFCNRK 258
Score = 96 (38.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 58 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDI 98
++F FG E ++KA+ + YT PTPIQ +A+P L G D+
Sbjct: 4 TTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDV 44
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 121 (47.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 42 AKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
AK SG +P P SF G + L +A Y +PTPIQ+QA+P AL GRD+I
Sbjct: 31 AKDETQTSGEEPA-PAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVI 87
Score = 89 (36.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
R T LFSAT ++E L R L++P+++ + + + I +P K +L + L
Sbjct: 221 RHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNLYLVYLL 280
Query: 174 VEFLSTGSLLIFVT 187
EF S +IF T
Sbjct: 281 NEFAGQ-SAIIFTT 293
>UNIPROTKB|J3QSF1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000579996
Uniprot:J3QSF1
Length = 153
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/106 (37%), Positives = 60/106 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 45 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 104
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKN 200
+K L + E +S ++FV TK+ C EL + ++
Sbjct: 105 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRD 150
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 117 (46.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 38/120 (31%), Positives = 68/120 (56%)
Query: 100 EPQVRSI--CDHV--RPNRQTLLFSATFKKRIEKLARDVLTDP-IKIVQGDIGEANTDIT 154
EPQ+R I C+ + + R T +FSATF K I+ LA+D L + + + G +G + +I
Sbjct: 408 EPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIM 467
Query: 155 QVVINLPQTQKLTWLTHNLVEFLSTGSL-LIFV-TKK-CFELVNLIAK-NYWLIQAVGIL 210
Q ++ + + +K ++L +L++ SL L+FV TK+ +L + + NY ++ G L
Sbjct: 468 QKIVWVEEDEKRSYLM-DLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDL 526
Score = 97 (39.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ +G D P P+S F E + + ++ Y PTP+Q ++PA GRD++
Sbjct: 219 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLM 272
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 110 (43.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/104 (33%), Positives = 59/104 (56%)
Query: 100 EPQVRS-ICDHVRPN---RQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDIT 154
EP++R + P+ RQTL+FSAT+ + I+++A D L D I + G +G A +D+
Sbjct: 446 EPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGACSDVE 505
Query: 155 QVVINLPQTQKLTWLTHNLVEFL-STGS--LLIFV-TKKCFELV 194
Q V+ + Q K L+E L +TG+ ++FV TK+ + +
Sbjct: 506 QTVVQVDQYSK----RDQLLELLRATGNERTMVFVETKRSADFI 545
Score = 105 (42.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG++PP + +F G + L K + K Y PTP+Q +P +GRD++
Sbjct: 265 VDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLM 318
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 141 (54.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGE--ANTDITQVV 157
EPQ+R I + V RQTL+++AT+ K + K+A D+L +P ++ G++ E AN ITQ +
Sbjct: 393 EPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTI 452
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS-LLIFVTKK--CFELVNLIAKNY 201
L +K + L ++ GS ++IF + K C +L + + +
Sbjct: 453 EVLAPMEKHSRL-EQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTF 498
Score = 66 (28.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 78 YTSPTPIQAQAVPAALSGRDII 99
+++P+PIQAQ+ P A+ RDI+
Sbjct: 249 FSAPSPIQAQSWPIAMQNRDIV 270
Score = 56 (24.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 21/60 (35%), Positives = 27/60 (45%)
Query: 43 KSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAA---LSGRDII 99
K ITVSG P P+ SF G L LR+C P + VP A L G +++
Sbjct: 146 KHEITVSGGQVPPPLMSFEATGLPNEL---LRECPNFMPYALSF--VPGAIFALGGANVV 200
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 113 (44.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 100 EPQVRSICDHVRPN---RQTLLFSATFKKRIEKLARDVLTDP-IKIVQGDIGEANTDITQ 155
EPQ+R I P R T +FSATF K I+ LA+D L D I + G +G + +I Q
Sbjct: 315 EPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQ 374
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
++ + + +K + L L+ S +L+FV K
Sbjct: 375 RLLWVNEMEKRSNLMEILMNEHSENLVLVFVETK 408
Score = 100 (40.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG P + F GF +M+ + + Y+ PTP+Q ++P L+ RD++
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 125 (49.1 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQG--DIGEANTDITQVV 157
EPQ+ I +RP+RQT++ SAT+ + +LA+ L DP+ + G D+ NT + Q V
Sbjct: 443 EPQIMKIILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNT-VQQTV 501
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ + + +K ++ + +LIFV KK
Sbjct: 502 LFVQEDEKKDYVFDFIHRMEPLDKVLIFVGKK 533
Score = 86 (35.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSG-ITVSG---ADP---PYPVSSFGH-FGFDEVL 69
++KNFY + +A + +E + R ++ I V D P PV +F F +
Sbjct: 230 LKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHYPGI 289
Query: 70 MKALRKCEYTSPTPIQAQAVPAALSGRDII 99
M+ + + + PTPIQ+QA P L+G D+I
Sbjct: 290 MENIVRVGFKKPTPIQSQAWPVVLNGIDLI 319
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 120 (47.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/91 (30%), Positives = 52/91 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+ I VRP+RQT++ SAT+ + +LA+ L +P+ + G + A + + Q +I
Sbjct: 407 EPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNII 466
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K + + L ST +++FV++K
Sbjct: 467 VTTEEEKWSHMQTFLQSMSSTDKVIVFVSRK 497
Score = 91 (37.1 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-------P-PYPVSSFGH-FGFDEV 68
++KNFY+ + ++ EA R K ++ D P P P +F F
Sbjct: 194 IKKNFYKESTATSAMSKVEADSWR-KENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPE 252
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+M+ ++K + PTPIQ+QA P L G D+I
Sbjct: 253 VMENIKKAGFQKPTPIQSQAWPIVLQGIDLI 283
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 115 (45.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 58 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ F G E L+KA+R Y +P+PIQAQA+PA +SGRD++
Sbjct: 6 TKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVM 47
Score = 92 (37.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVINLP 161
++ + + +RQ LLFSATF I LA+ ++ +P++I V + A +TQ + +
Sbjct: 175 IKKLMTALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEK-VTQWLTAVD 233
Query: 162 QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K LTH L++ + +L+F K
Sbjct: 234 KKRKPAVLTH-LIKENNWQQVLVFTKTK 260
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 121 (47.7 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R +T+ G P P+ S+ GF + ++ + K Y PTPIQ QA+P
Sbjct: 368 MTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPI 427
Query: 92 ALSGRDII 99
L RDII
Sbjct: 428 GLQNRDII 435
Score = 90 (36.7 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G +G+ Q+V + + K L L
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEIL 661
Query: 174 VEFLSTGSLLIFVTKK 189
+ ++IFV +K
Sbjct: 662 SRKIDP-PVIIFVNQK 676
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 105 (42.0 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
EPQ+ I VRP+RQT++ SAT+ + +LA+ L +P+ IV +G + ++ VV+
Sbjct: 218 EPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPM-IVY--VGTLDLAVSGVVLK 274
Query: 160 LPQTQK--LTW--LTHNLVEFLSTGSLLIFV 186
Q K TW + N F T +++FV
Sbjct: 275 YLQFDKDIFTWKYMQVNAQSFC-TDVVVVFV 304
Score = 102 (41.0 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITV-----SGADP--PYPVSSFGHFGFDEV-- 68
+EKNFY+ A ++P+E + R ++ + G P PV F F++
Sbjct: 5 IEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDV-FEQYPD 63
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+M +RK + PTPIQ+QA P L G D+I
Sbjct: 64 IMANIRKTGFQKPTPIQSQAWPIILQGIDLI 94
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 111 (44.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF F F +M +R C Y PTPIQAQA+P L G D+I
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVI 42
Score = 97 (39.2 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
+P ++SI + QTLLFSAT + KL + T+P+ I G A++ ++ V
Sbjct: 162 QPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPASS-VSHSVYP 220
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ QK T L +++ T S+LIF K
Sbjct: 221 VKNHQK-TPLLIEILKTTETKSVLIFARTK 249
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 107 (42.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+ +I + + RQ LLFSAT K+++ LA+ + D I+I A+T I Q + + +
Sbjct: 168 INNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDK 227
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK--CFELVNLIAK 199
+K L+H L++ + LIF+ K +LV+ + K
Sbjct: 228 DRKSALLSH-LIKENNWAQALIFIQTKHGAAKLVSQLEK 265
Score = 99 (39.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F G L+KA+ + Y SPTPIQ QA+P+ L+G++++
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVL 42
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 107 (42.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+ +I + + RQ LLFSAT K+++ LA+ + D I+I A+T I Q + + +
Sbjct: 168 INNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDK 227
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK--CFELVNLIAK 199
+K L+H L++ + LIF+ K +LV+ + K
Sbjct: 228 DRKSALLSH-LIKENNWAQALIFIQTKHGAAKLVSQLEK 265
Score = 99 (39.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F G L+KA+ + Y SPTPIQ QA+P+ L+G++++
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVL 42
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 105 (42.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 17 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVS----GADPPYPVSSFGHFGFDEVLMKA 72
E EK + T ++ + L++KS TVS + SF L++A
Sbjct: 36 EAEKEGGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQA 95
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDII 99
+ Y+ PTPIQ++A+P AL G DII
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDII 122
Score = 102 (41.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
R T LFSAT +I+KL R LT+P+K + + + Q ++ +P K T+L + L
Sbjct: 257 RTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLL 316
Query: 174 VEFLSTGSLLIFVTKK 189
EF+ +++IF K
Sbjct: 317 NEFIGK-TMIIFTRTK 331
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 109 (43.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
+QTLLFSATF +++ L +++L +PI+I Q +A+T + Q V + + +K L H L
Sbjct: 193 KQTLLFSATFPEQVTTLTQELLNNPIEI-QLQSADAST-LVQRVFTVNKGEKTAVLAH-L 249
Query: 174 VEFLSTGSLLIFVTKK--CFELVNLIAK 199
++ LIFV K C L +AK
Sbjct: 250 IQQEQWRQALIFVNAKHHCEHLAEKLAK 277
Score = 95 (38.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 58 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
++F G L+ L + EY PTPIQA+A+P+ +GRD+I
Sbjct: 8 ATFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLI 49
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 157 (60.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 180 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVD 239
Query: 159 NLPQTQKLTWLTHNLVEFLST--GSLLIFV-TKK-CFELVNLIAKNYWLIQAVGI 209
+K L + E +S ++FV TK+ C EL + ++ W A+GI
Sbjct: 240 VCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGW--PAMGI 292
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 126 (49.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 11 STIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLM 70
+ I+ + EK++ Q + +T ++ + R + I + G P P+ + L+
Sbjct: 653 NNIIKDVCEKHWSQKSRE--EMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLL 710
Query: 71 KALRKCEYTSPTPIQAQAVPAALSGRDII 99
KA++K +Y PTPIQ QA+P AL RD+I
Sbjct: 711 KAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
Score = 83 (34.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
++ ++ + H R R T +FSAT +E+L+R L P I GD G I Q +
Sbjct: 890 LQEEMMTKAGH-RLYRLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLE 948
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKN 200
L + +K L ++E +++FV +K ++ ++I+K+
Sbjct: 949 FLTEGKKKQKL-QEILEMYEP-PIIVFVNQK--KVADIISKS 986
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 126 (49.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 11 STIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLM 70
+ I+ + EK++ Q + +T ++ + R + I + G P P+ + L+
Sbjct: 653 NNIIKDVCEKHWSQKSRE--EMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLL 710
Query: 71 KALRKCEYTSPTPIQAQAVPAALSGRDII 99
KA++K +Y PTPIQ QA+P AL RD+I
Sbjct: 711 KAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
Score = 83 (34.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 99 IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVI 158
++ ++ + H R R T +FSAT +E+L+R L P I GD G I Q +
Sbjct: 890 LQEEMMTKAGH-RLYRLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLE 948
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKN 200
L + +K L ++E +++FV +K ++ ++I+K+
Sbjct: 949 FLTEGKKKQKL-QEILEMYEP-PIIVFVNQK--KVADIISKS 986
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 116 (45.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 92 ALSGRDII 99
L RDII
Sbjct: 424 GLQNRDII 431
Score = 90 (36.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G G+ + + Q V + +++K L L
Sbjct: 599 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 658
Query: 174 VEFLSTGSLLIFVTKK--CFELVNLIAK 199
+ ++IFV +K C L + K
Sbjct: 659 EQGFDP-PIIIFVNQKKGCDVLAKSLEK 685
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 116 (45.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 92 ALSGRDII 99
L RDII
Sbjct: 425 GLQNRDII 432
Score = 90 (36.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G G+ + + Q V + +++K L L
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 174 VEFLSTGSLLIFVTKK--CFELVNLIAK 199
+ ++IFV +K C L + K
Sbjct: 660 EQGFDP-PIIIFVNQKKGCDVLAKSLEK 686
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 116 (45.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 92 ALSGRDII 99
L RDII
Sbjct: 425 GLQNRDII 432
Score = 90 (36.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G G+ + + Q V + +++K L L
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 174 VEFLSTGSLLIFVTKK--CFELVNLIAK 199
+ ++IFV +K C L + K
Sbjct: 660 EQGFDP-PIIIFVNQKKGCDVLAKSLEK 686
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 116 (45.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 92 ALSGRDII 99
L RDII
Sbjct: 425 GLQNRDII 432
Score = 90 (36.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++F+AT +E+LAR L P + G G+ + + Q V + +++K L L
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL 659
Query: 174 VEFLSTGSLLIFVTKK--CFELVNLIAK 199
+ ++IFV +K C L + K
Sbjct: 660 EQGFDP-PIIIFVNQKKGCDVLAKSLEK 686
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 108 (43.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 108 DHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLT 167
D + R T +FSAT +E+LAR L +P+ + G G+ I+Q VI + +++K
Sbjct: 506 DEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFF 565
Query: 168 WLTHNLVEFLSTGSLLIFV-TKK-CFELVNLIAKN 200
L L++ L + ++FV TKK C + IAKN
Sbjct: 566 RL-QKLLDELGEKTAIVFVNTKKNC----DSIAKN 595
Score = 97 (39.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 29 IARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQA 88
+ +T ++ + R I+ G+ P P+ S+ L+KA+ + Y P+PIQ A
Sbjct: 284 LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAA 343
Query: 89 VPAALSGRDII 99
+P L RD+I
Sbjct: 344 IPLGLQQRDVI 354
>DICTYBASE|DDB_G0292010 [details] [associations]
symbol:DDB_G0292010 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
Length = 777
Score = 116 (45.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIV-------QGDIGEANTDIT 154
Q++ I + +RP+RQTL+FSATF + ++ A+ LT+P+KI QG + ++
Sbjct: 484 QLQKISEQIRPDRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSIISKNVK 543
Query: 155 QVVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQAVGILMCPK 214
QVV + + +K +LT + + LL+ VN I K+ I V MC +
Sbjct: 544 QVVKPIAEKEKSKYLT-TFINSIMKKELLLRNRSLILIFVNTI-KSVKPILTVIEKMCDQ 601
Query: 215 SPSR 218
R
Sbjct: 602 FRER 605
Score = 87 (35.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITVS----GADPPYPVSSFGHFGFDEVLMKAL 73
++K +++ + + +LT ++ +E+R K VS G + P P+ +F + K +
Sbjct: 242 IKKRYWK--DTMKQLTSEDHREMRIKIKANVSTSFDGQEIPRPIITFEDQDLPLSMKKFI 299
Query: 74 R--KCEY---TSPTPIQAQAVPAALSGRDII 99
+Y T+PTP+Q+Q P LSG+DI+
Sbjct: 300 GFLTTKYPSITAPTPVQSQCWPGILSGQDIL 330
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 101 (40.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V+SF G L L + Y SPTP+QA +PA LSGRD++
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVL 50
Score = 98 (39.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVINLPQTQKLTWLTHN 172
+QTLLFSATF + + L +L P++ +Q E + I Q VI + + QK L H
Sbjct: 191 KQTLLFSATFPEEVRALTTKLLHQPLEYHLQS---EQESTIEQRVITVNREQKTALLAH- 246
Query: 173 LVEFLSTGSLLIFVTKK--CFELVNLIAK 199
L++ LIFV+ K C L ++K
Sbjct: 247 LIKQHQWSQALIFVSAKNTCNHLAQKLSK 275
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 101 (40.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V+SF G L L + Y SPTP+QA +PA LSGRD++
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVL 50
Score = 98 (39.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVINLPQTQKLTWLTHN 172
+QTLLFSATF + + L +L P++ +Q E + I Q VI + + QK L H
Sbjct: 191 KQTLLFSATFPEEVRALTTKLLHQPLEYHLQS---EQESTIEQRVITVNREQKTALLAH- 246
Query: 173 LVEFLSTGSLLIFVTKK--CFELVNLIAK 199
L++ LIFV+ K C L ++K
Sbjct: 247 LIKQHQWSQALIFVSAKNTCNHLAQKLSK 275
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 107 (42.7 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G E L+ A+ YT PTP+Q +A+PA L GRD++
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLM 42
Score = 95 (38.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV---VIN 159
V+ + + RQ LLFSATF K I LA +L +P +I ++ NT + ++ V
Sbjct: 174 VKKVLARLPAKRQNLLFSATFSKDITDLAGKLLHNPERI---EVTPPNTTVERIEQRVFR 230
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
LP + K L H L+ + +L+F K
Sbjct: 231 LPASHKRALLAH-LITAGAWEQVLVFTRTK 259
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 125 (49.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 100 EPQVRSICDHV-RPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGE--ANTDITQV 156
E +++I + RQTL+F+AT+ K + +LA + + P+K+ GD E AN ITQV
Sbjct: 314 EEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQV 373
Query: 157 V--IN-LPQTQKLTWLT--HNLVEFLSTGSLLIFVT--KKCFELVNLIAKNYWLIQAV 207
V IN + +KL L +N E S +LIF K+ + N + +N + + A+
Sbjct: 374 VEVINKFDKEKKLIQLLRKYNANES-SDNKILIFALYKKEASRIENFLKRNRFSVAAI 430
Score = 72 (30.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 23 YQPHEDIARLTPQEAQELRAKSGITVSGADPPY----PVSSFGHFGFDEVLMKALRKCEY 78
Y ++ ++ + + + + ITV DP P+ SF + L K +
Sbjct: 118 YTQSSKLSSVSQSDIDKFLSDNEITVE--DPSSSSLRPILSFDQVQLTSAITSKLSK--F 173
Query: 79 TSPTPIQAQAVPAALSGRDII 99
PTPIQ+ + P LSG+D+I
Sbjct: 174 DKPTPIQSVSWPFLLSGKDVI 194
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 107 (42.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q I
Sbjct: 185 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIF 244
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 245 IPSKFKDTYLVYILNE-LAGNSFMIF 269
Score = 91 (37.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G +VL +A + +T PT IQ +A+P AL GRDII
Sbjct: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII 65
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 105 (42.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q +
Sbjct: 211 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 270
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 271 IPSKFKDTYLVYILNE-LAGNSFMIF 295
Score = 94 (38.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 34 PQEAQELRAKSGITVSGADPPYPV------SSFGHFGFDEVLMKALRKCEYTSPTPIQAQ 87
P+ A ++ A S A+ P P +F G +VL +A + +T PT IQ +
Sbjct: 21 PESAVDMAAPEEHD-SPAEEPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIE 79
Query: 88 AVPAALSGRDII 99
A+P AL GRDII
Sbjct: 80 AIPLALQGRDII 91
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 133 (51.9 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVV 157
EPQ+R I D +RP+RQTL++SAT+ K + +LA D L D I I G + AN +I Q+V
Sbjct: 97 EPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 155
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 104 (41.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+ P++ + L+ I++ G D P P+ ++ G ++K L+K Y P+ IQ A+P
Sbjct: 223 MKPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPV 282
Query: 92 ALSGRDII 99
L +D+I
Sbjct: 283 LLQRKDLI 290
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQT++FSAT R+ LA+ L +P+ + G+IG+A + Q V + K W +
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSK-KW--RRV 506
Query: 174 VEFLSTGS----LLIFVTKKCFELVNLIAKNYWLIQAVG 208
E L + ++IFV K + IAK + A+G
Sbjct: 507 EEILESNRFSPPIIIFVNLK--RNIEAIAKQ---LNAIG 540
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 112 (44.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 16 EEVEKN--FYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH----FGFDEVL 69
E++ KN P +++ R ++A R + I VSG + P P+ SF +G + +
Sbjct: 94 EQITKNEIVENPKKELNRQMERDALS-RKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYI 152
Query: 70 MKALRKCEYTSPTPIQAQAVPAALSGRD 97
++ L + + PTPIQ QA+P LSGR+
Sbjct: 153 LRNLAELGFKEPTPIQRQAIPILLSGRE 180
Score = 85 (35.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 118 LFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQ-KLTWLTHNLVEF 176
LFSAT +E+LAR ++ D ++++ G A+ + Q ++ + KL L + E
Sbjct: 319 LFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAES 378
Query: 177 LSTGSLLIFVTKK 189
L+ +LIFV K
Sbjct: 379 LNP-PVLIFVQSK 390
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 124 (48.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG--EANTDITQVV 157
EPQ+R I VRP+RQT++ SAT+ + +LA L DP+ + G++ NT + Q +
Sbjct: 387 EPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNT-VKQNI 445
Query: 158 INLPQTQKLTWLTHNLVEFLSTGS-LLIFVTKK 189
I + +K LT VE +S +++FV++K
Sbjct: 446 IVTTEKEKRA-LTQEFVENMSPNDKVIMFVSQK 477
Score = 72 (30.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKS-GITV----SGADP--PYPVSSFGHFGFDEV-- 68
V+KNFY + + ++ + R ++ IT SG P P F F +
Sbjct: 174 VKKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKD-AFQQYPD 232
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
L+K++ + PTPIQ+QA P L G D+I
Sbjct: 233 LLKSIIRVGIVKPTPIQSQAWPIILQGIDLI 263
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 102 (41.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTD-ITQVVI 158
E Q+ I VRP+RQT++ SAT+ I +LA L +P+ + G + D + Q +I
Sbjct: 380 EHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII 439
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K + L +++FV++K
Sbjct: 440 ITTEEEKRSLFQEFLQSLSPKDKVIVFVSRK 470
Score = 98 (39.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/96 (33%), Positives = 42/96 (43%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH-F 63
LPPI + V + + Q DI R K G P P+ F F
Sbjct: 164 LPPIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDG---EKRPIPNPICKFEDAF 220
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G LMK+++K + PTPIQ+QA P L G D+I
Sbjct: 221 GPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLI 256
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 105 (42.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q +
Sbjct: 184 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 243
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 244 IPSKFKDTYLVYILNE-LAGNSFMIF 268
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G +VL +A + +T PT IQ +A+P AL GRDII
Sbjct: 24 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII 64
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 105 (42.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q +
Sbjct: 187 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 246
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 247 IPSKFKDTYLVYILNE-LAGNSFMIF 271
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G +VL +A + +T PT IQ +A+P AL GRDII
Sbjct: 27 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDII 67
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 102 (41.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTD-ITQVVI 158
E Q+ I VRP+RQT++ SAT+ I +LA L +P+ + G + D + Q +I
Sbjct: 389 EHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII 448
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K + L +++FV++K
Sbjct: 449 ITTEEEKRSLFQEFLQSLSPKDKVIVFVSRK 479
Score = 98 (39.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/96 (33%), Positives = 42/96 (43%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH-F 63
LPPI + V + + Q DI R K G P P+ F F
Sbjct: 173 LPPIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDG---EKRPIPNPICKFEDAF 229
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G LMK+++K + PTPIQ+QA P L G D+I
Sbjct: 230 GPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLI 265
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 101 (40.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G L KA+ + Y +P+PIQAQA+PA L+G+D++
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVM 42
Score = 97 (39.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
++ I + RQ L+FSATF I +LA+ ++ P++I A T + Q + + +
Sbjct: 168 IKKILALLPAKRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDK 227
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQA 206
TQK L L++ + +L+F K N +AK+ LIQA
Sbjct: 228 TQKSALLIQ-LIKQENWQQVLVFSRTK--HGANRLAKS--LIQA 266
>UNIPROTKB|J3KRX8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0045069 "regulation
of viral genome replication" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048306 "calcium-dependent protein binding" evidence=IEA]
EMBL:AC009994 HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000584279
Uniprot:J3KRX8
Length = 120
Score = 130 (50.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 28/66 (42%), Positives = 36/66 (54%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 78
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 79 TSPTPI 84
T PT I
Sbjct: 115 TEPTAI 120
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 108 (43.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDI-GEANTDITQVVINL 160
++ I ++ +QTLLFSATF I K+++++L +P K+V+ D +A D+ Q+V +
Sbjct: 170 EIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEP-KMVEIDEKNKAADDVEQLVYGV 228
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFV-TKKC 190
+K LT L+ + +L+F TK+C
Sbjct: 229 DADRKRE-LTSFLIGSRNWKQVLVFTRTKQC 258
Score = 85 (35.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F F D L+KA+ + Y PT IQ Q++P L+ D++
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVM 46
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 108 (43.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDI-GEANTDITQVVINL 160
++ I ++ +QTLLFSATF I K+++++L +P K+V+ D +A D+ Q+V +
Sbjct: 170 EIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEP-KMVEIDEKNKAADDVEQLVYGV 228
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFV-TKKC 190
+K LT L+ + +L+F TK+C
Sbjct: 229 DADRKRE-LTSFLIGSRNWKQVLVFTRTKQC 258
Score = 85 (35.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F F D L+KA+ + Y PT IQ Q++P L+ D++
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVM 46
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 105 (42.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q +
Sbjct: 185 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 244
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 245 IPSKFKDTYLVYILNE-LAGNSFMIF 269
Score = 89 (36.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 38 QELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRD 97
+E + SG + A+ +F G +VL +A + + PT IQ +A+P AL GRD
Sbjct: 5 EEPDSPSGALQTAAEEE-ETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRD 63
Query: 98 II 99
II
Sbjct: 64 II 65
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 108 (43.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 27/92 (29%), Positives = 53/92 (57%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+ I +RP+RQT++ SAT+ + +LA+ L +P+ + G + A + + Q +I
Sbjct: 409 EPQIMKILLDIRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNII 468
Query: 159 NLPQTQKLTWLTHNLVEFLST-GSLLIFVTKK 189
+ +K + + +E +S ++IFV++K
Sbjct: 469 VTTEDEKRSHI-QTFIESMSPKDKVIIFVSRK 499
Score = 89 (36.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-------P-PYPVSSFGH-FG-FDE 67
++KNFY E + ++ ++ Q R K + D P P P F F + E
Sbjct: 193 IKKNFYMESEITSSMSQEQVQNWR-KENYNIMCDDLKDGEKRPIPNPACKFEDAFQCYPE 251
Query: 68 VLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V++ ++K + PTPIQ+QA P L G D+I
Sbjct: 252 VMIN-IKKAGFQKPTPIQSQAWPIILQGIDLI 282
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 113 (44.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
R+T LFSAT K+++KL R L DP+K+ + + + Q + +P K +L H L
Sbjct: 236 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHIL 295
Query: 174 VEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQAVGILMCP 213
E L+ S +IF + C N K +++A+G+ P
Sbjct: 296 NE-LAGNSFMIFCST-C----NNTVKTALMLRALGLAAIP 329
Score = 80 (33.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 64 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
G +E L +A + ++ +P+ IQ +A+P AL G+D+I
Sbjct: 67 GLNEALCQACDELKWKAPSKIQREAIPVALQGKDVI 102
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 111 (44.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG-EANTDITQVVI 158
EPQ+ I VRP+RQT++ SAT+ + +LA+ L +P+ + G + A + +TQ +I
Sbjct: 406 EPQIMKILLDVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNII 465
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K + + + ++IFV++K
Sbjct: 466 VTTEDEKRSHIQAFIDSMSPKDKVIIFVSRK 496
Score = 85 (35.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 29/92 (31%), Positives = 43/92 (46%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-------P-PYPVSSF--GHFGFDE 67
V+KNFY E + ++ ++ R K + D P P P +F + E
Sbjct: 193 VKKNFYIESEKTSSMSQEQVDNWR-KENYNIICDDLKDGEKRPLPNPTCNFEDAFHCYPE 251
Query: 68 VLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V M+ + K + PTPIQ+QA P L G D+I
Sbjct: 252 V-MRNIEKAGFQKPTPIQSQAWPIILQGIDLI 282
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 111 (44.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G E L++A+ YT PTP+Q +A+PA L GRD++
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLM 42
Score = 84 (34.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV---VIN 159
V+ + + RQ LLFSATF I LA +L +P +I ++ NT + ++ V
Sbjct: 174 VKKVLARLPAKRQNLLFSATFSNDITSLAGKLLHNPERI---EVTPPNTTVERIEQRVFR 230
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
L K + L H L+ + +L+F K
Sbjct: 231 LAANHKRSLLAH-LITVGAWEQVLVFTRTK 259
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 106 (42.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQ-GDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTLLFSATF + I++LA D L V G +G A D+ Q ++ + Q K L
Sbjct: 445 KEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKL 504
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 505 VE-ILRNIGDERTMVFVETKK 524
Score = 91 (37.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 249 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLM 302
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 104 (41.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 32 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 91
+T ++ + I+ G P P+ ++ +++A+R+ Y P+PIQ Q++P
Sbjct: 387 MTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPI 446
Query: 92 ALSGRDII 99
+L+GRDI+
Sbjct: 447 SLTGRDIL 454
Score = 95 (38.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 88 AVPAALSGRDIIEPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIG 147
A+P++ + E + D R T+LFSAT +EKL++ L P I G+ G
Sbjct: 590 AMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAG 649
Query: 148 EANTDITQVVINLP-QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ I Q VI + + K LT L++ ++IFV KK
Sbjct: 650 KVVDRIRQTVIFVKSENDKKEHLTQ-LIKDGPPPPIIIFVNKK 691
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 101 (40.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L DP+K + Q I
Sbjct: 240 ESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIF 299
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFV-TKKCFELVNLIAKN 200
+P K +L L E L+ S ++F T + V L+ +N
Sbjct: 300 IPSKYKDCYLVSILNE-LAGNSFMVFCGTCNNTQRVALLLRN 340
Score = 93 (37.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 58 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+SF G EVL +A + + PT IQ +A+P AL GRD+I
Sbjct: 79 TSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVI 120
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 113 (44.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 42/123 (34%), Positives = 63/123 (51%)
Query: 100 EPQVRSICDHVR-P----NRQTLLFSATFKKRIEKLARDVLTDPIKIVQG-DIGEANTDI 153
E +R+I H P +RQT+ FSAT+ + + LA L DP+KI G D A+ +I
Sbjct: 327 EQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNI 386
Query: 154 TQVVINLPQTQKLTWLTHNLV-EFLSTGS----LLIFVT--KKCFELVNLIAKNYWLIQA 206
TQ+V L + + NL+ + LS+G +LIFV K+ + +A+ Y
Sbjct: 387 TQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARKY---NV 443
Query: 207 VGI 209
VGI
Sbjct: 444 VGI 446
Score = 80 (33.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 35 QEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA-LRKC--EYTSPTPIQAQAVPA 91
+EA + K +S ADP + FDE+ + A LR+ Y PTPIQA P
Sbjct: 140 EEAYDRYIKKH-NISFADPKSSENLLPILQFDELDVSAKLREGLKNYKEPTPIQAATWPY 198
Query: 92 ALSGRDII 99
L+GRD++
Sbjct: 199 LLAGRDVV 206
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 99 (39.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 44 SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
S IT D +F L++++ ++T PTPIQ++A+P AL G+DII
Sbjct: 109 SSITTIDPDAELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDII 164
Score = 95 (38.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
P + I + R T LFSAT +IEKL R L +P+++ + ++ Q ++ +
Sbjct: 285 PALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLV 344
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIF 185
K T L H L EF+ S+++F
Sbjct: 345 NDGYKNTILIHLLNEFMGK-SIIVF 368
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 105 (42.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q +
Sbjct: 185 ETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLF 244
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K T+L + L E L+ S +IF
Sbjct: 245 IPSKFKDTYLVYILNE-LAGNSFMIF 269
Score = 86 (35.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G +VL +A + + PT IQ +A+P AL GRDII
Sbjct: 25 TFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDII 65
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 102 (41.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E +V I + +R+T LFSAT K+++KL R L +P+K + + Q I
Sbjct: 186 ETEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIF 245
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
+P K ++L + L E L+ S +IF
Sbjct: 246 IPSKFKDSYLVYILNE-LAGNSFMIF 270
Score = 88 (36.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G +VL +A + + PT IQ +A+P AL GRDII
Sbjct: 26 SFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDII 66
>POMBASE|SPCC1494.06c [details] [associations]
symbol:SPCC1494.06c "ATP-dependent RNA helicase Dbp9
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1494.06c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14810
HOGENOM:HOG000253015 OMA:TFLMSAT OrthoDB:EOG4DFSWQ PIR:T41007
RefSeq:NP_588531.1 ProteinModelPortal:O60080 SMR:O60080
STRING:O60080 EnsemblFungi:SPCC1494.06c.1 GeneID:2538776
KEGG:spo:SPCC1494.06c NextBio:20799959 Uniprot:O60080
Length = 595
Score = 106 (42.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIEPQVRS 105
+F F D L +A+ KCE+ PT +Q++ +P AL G+D++ Q R+
Sbjct: 15 TFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVA-QART 60
Score = 86 (35.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 115 QTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNLV 174
Q+ L SAT K I L + V +P + D EA+ +TQ V+ + K L + L+
Sbjct: 197 QSFLMSATLSKNIASLQKLVCRNPFILAVKD-KEASGKLTQYVVKCSEQDKFL-LAYILL 254
Query: 175 EF-LSTGSLLIFVTK--KCFEL 193
+ L G +LIFV + +C+ L
Sbjct: 255 KLRLIKGKILIFVNEINRCYRL 276
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 102 (41.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V++F DE L++AL+ +T PT IQA A+P AL GRD++
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVL 45
Score = 87 (35.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 103 VRSICDHVRPNRQTLLFSATFK-KRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLP 161
+ I R +QTLLFSAT + I+ A +L DP+++ I Q
Sbjct: 171 IEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRAD 230
Query: 162 QTQ-KLTWLTHNLVEFLSTGSLLIFVTKKCFELVNLIAKNYWLIQAVGILMC 212
+ K L H L + +T S+ +FV K+ E V+ +A WL +A GI C
Sbjct: 231 DLEHKTALLVHLLKQPEATRSI-VFVRKR--ERVHELAN--WLREA-GINNC 276
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 104 (41.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q ++ + Q K
Sbjct: 473 KEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSK---- 528
Query: 170 THNLVEFL-STGS--LLIFV-TKK 189
LVE L S G ++FV TKK
Sbjct: 529 REKLVEILRSIGDERTMVFVETKK 552
Score = 90 (36.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 330
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 103 (41.3 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q V+ + Q K L
Sbjct: 452 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKL 511
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 512 VE-ILRNIGDERTMVFVETKK 531
Score = 90 (36.7 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 309
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 103 (41.3 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q V+ + Q K L
Sbjct: 472 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKL 531
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 532 VE-ILRNIGDERTMVFVETKK 551
Score = 90 (36.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 329
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 103 (41.3 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q V+ + Q K L
Sbjct: 473 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKL 532
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 533 VE-ILRNIGDERTMVFVETKK 552
Score = 90 (36.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 330
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 96 (38.9 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G +VL++ + + Y PT IQ QA+P L GRD+I
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLI 42
Score = 91 (37.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+ I D + Q LLFSAT +++ +LA+ + DP +I + ++I+Q +I + +
Sbjct: 168 INKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDK 227
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK--CFELVNLIAK 199
K L+H L+ LIF+ K +LV+ + K
Sbjct: 228 DTKSALLSH-LINEQQWDQALIFIETKHGAAKLVSQLEK 265
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 96 (38.9 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G +VL++ + + Y PT IQ QA+P L GRD+I
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLI 42
Score = 91 (37.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+ I D + Q LLFSAT +++ +LA+ + DP +I + ++I+Q +I + +
Sbjct: 168 INKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDK 227
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK--CFELVNLIAK 199
K L+H L+ LIF+ K +LV+ + K
Sbjct: 228 DTKSALLSH-LINEQQWDQALIFIETKHGAAKLVSQLEK 265
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 101 (40.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTLLFSATF + I++LA + L ++ + + G +G A D+ Q ++ + Q K L
Sbjct: 446 KEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKL 505
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 506 VE-ILRNIGDERTMVFVETKK 525
Score = 91 (37.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 250 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLM 303
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 100 (40.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTD-ITQVVINLP 161
++ I V RQ LLFSATF ++KLA +++ P +++ D D ++QVV +
Sbjct: 169 IQKILQAVNKKRQNLLFSATFSSAVKKLANEMMIKP-QVISADKQNTTADTVSQVVYPVE 227
Query: 162 QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
Q +K L+ L+ + +L+F +
Sbjct: 228 QRRKRELLSE-LIGKKNWQQVLVFTATR 254
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F F F +++A+ C Y TPIQ QA+PA G+D++
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVL 42
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+S F G ++ +L K YT+PTPIQ QA+P + GRDI+
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIV 48
Score = 85 (35.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+R+I +V RQTL FSAT K +E LA L +P ++ I Q V + Q
Sbjct: 175 LRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQ 234
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+K + L + + S ++F K
Sbjct: 235 PEKASLLIEKIRD-PELRSAIVFTRTK 260
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q ++ + Q K L
Sbjct: 474 KEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKL 533
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 534 VE-ILRNIGDERTMVFVETKK 553
Score = 91 (37.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG DPP + +F + L + K YT TP+Q ++P GRD++
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLM 331
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q ++ + Q K L
Sbjct: 474 KEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKL 533
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 534 VE-ILRNIGDERTMVFVETKK 553
Score = 91 (37.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG DPP + +F + L + K YT TP+Q ++P GRD++
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLM 331
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 96 (38.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVIN 159
P ++ + + P RQTL FSATF +I+ +A ++ DPI++ V A T + Q+V
Sbjct: 174 PDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAET-VQQMVYP 232
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTK 188
+ + +K L++ L+ + +L+F TK
Sbjct: 233 VDKKRKRELLSY-LIGSKNWQQVLVF-TK 259
Score = 90 (36.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G D L+ L + +PTPIQ QA+P L G+D++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVL 47
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 96 (38.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVIN 159
P ++ + + P RQTL FSATF +I+ +A ++ DPI++ V A T + Q+V
Sbjct: 174 PDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAET-VQQMVYP 232
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTK 188
+ + +K L++ L+ + +L+F TK
Sbjct: 233 VDKKRKRELLSY-LIGSKNWQQVLVF-TK 259
Score = 90 (36.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G D L+ L + +PTPIQ QA+P L G+D++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVL 47
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 107 (42.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGD--IGEANTDITQVVI 158
Q+ +I H+ RQTLLFSAT + + LAR LT+P KI V D + + Q +
Sbjct: 214 QIDNILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYV 273
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+P +KL L + L + L+ F + K
Sbjct: 274 KVPLDEKLDVLWSFIKSHLKSKILVFFSSSK 304
Score = 83 (34.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 19 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYP---VSSFGHFGFDEVLMKALRK 75
+K F + I RL +E +EL AK ++ DP VS F E +K L++
Sbjct: 9 KKVFNKSTRKINRL--KEEEEL-AKLQERINNYDPKTDEASVSQFSDLPITENTLKGLKE 65
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+ S T IQ + +P AL G D++
Sbjct: 66 ATFVSLTDIQKKTIPIALKGEDLM 89
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 97 (39.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q V+ + Q K
Sbjct: 452 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK---- 507
Query: 170 THNLVEFL 177
LVE L
Sbjct: 508 REKLVEIL 515
Score = 90 (36.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 309
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 108 (43.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTD-ITQVVINLP 161
V+SI + +RQTLLFSAT IE LA +LTDP KI Q D + Q V +L
Sbjct: 170 VQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKI-QITAETVTIDLVNQSVYHLD 228
Query: 162 QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
++ K+ L N++ +LIF K
Sbjct: 229 KSNKVP-LLFNILTKADYEKVLIFCKTK 255
Score = 74 (31.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+S F F E ++ + Y PTPIQ + +PA ++G D++
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLL 43
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 101 (40.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQVVIN 159
P + I + R+TLLFSAT ++EKL R L P+++ V +T + Q +
Sbjct: 208 PIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDT-LIQRYLF 266
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIF 185
P K T+L + LV L+ S++IF
Sbjct: 267 FPFKHKDTYLVY-LVNELAGNSIIIF 291
Score = 83 (34.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G + L +A K + +PTPIQ +A+P L+ RD+I
Sbjct: 47 TFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVI 87
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 114 (45.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 36 EAQELRAKSGITVSG---ADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAA 92
+AQ LR K I V G A PP PV +F G L+ L Y PTPIQ QA+PAA
Sbjct: 86 DAQLLRRKLDIHVQGQGSAVPP-PVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAA 144
Query: 93 LSGRDII 99
L+G+ ++
Sbjct: 145 LTGKSLL 151
Score = 68 (29.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 115 QTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQK 165
Q LLFSAT + +EK+ + + I + G+ + N + Q+ I + QK
Sbjct: 292 QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQK 342
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 107 (42.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA D L D + + G +G A TD+ Q + + + K L
Sbjct: 365 KEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQL 424
Query: 170 THNLVEFLSTGSLLIFVTKK 189
+L+ + + ++FV K
Sbjct: 425 L-DLLRTIGSERTMVFVETK 443
Score = 78 (32.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG + P + +F E L + + Y PTP+Q +P +GRD++
Sbjct: 169 VDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLM 222
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 100 (40.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F FG D LM + + PT IQ QA+PAA++G D+I
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLI 42
Score = 82 (33.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKK-RIEKLARDVLTDPIKIVQGDIGEANTDITQ---VV 157
Q+ DH + RQTLLFSAT ++ + A ++LT P +I + DI + +
Sbjct: 170 QINKAADHRK--RQTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFYLA 227
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
NL TQK L H LV S ++IF +
Sbjct: 228 DNL--TQKEALLQHFLVTEKSQ-QIIIFTATR 256
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 100 (40.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F FG D LM + + PT IQ QA+PAA++G D+I
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLI 42
Score = 82 (33.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKK-RIEKLARDVLTDPIKIVQGDIGEANTDITQ---VV 157
Q+ DH + RQTLLFSAT ++ + A ++LT P +I + DI + +
Sbjct: 170 QINKAADHRK--RQTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFYLA 227
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
NL TQK L H LV S ++IF +
Sbjct: 228 DNL--TQKEALLQHFLVTEKSQ-QIIIFTATR 256
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 97 (39.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 117 LLFSATFKKRIEKLARDVLT-DPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNLVE 175
LLFSATF K+I LAR+ L+ D +++ G G +++I Q VI K L ++L+
Sbjct: 324 LLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRAL-NDLIN 382
Query: 176 FLSTGSLLIFVTKK 189
+ +IFV K
Sbjct: 383 SMPPQRTIIFVNNK 396
Score = 89 (36.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 15 YEEVEKNFY-QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKAL 73
Y E+EK + + E A + + +E+ + G P F G ++K +
Sbjct: 82 YPELEKQLFGERGESCAGIDFKVIREI----AVVQEGPVRVEPALRFEDAGLHPAMLKNV 137
Query: 74 RKCEYTSPTPIQAQAVPAALSGRDII 99
C Y PTPIQA +PA G D+I
Sbjct: 138 DLCGYKVPTPIQAYCIPAIHKGHDVI 163
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 93 (37.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G L++A+R+ Y PTP+Q QA+P L RD++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVM 51
Score = 89 (36.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
P +R I + +RQ LLFSATF K I++L +L P I A IT VV +
Sbjct: 179 PDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPV 238
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K L+ ++ + +L+F K
Sbjct: 239 DRQRKRELLSF-MIGSKNWRQVLVFTRTK 266
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 93 (37.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF G L++A+R+ Y PTP+Q QA+P L RD++
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVM 51
Score = 89 (36.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 101 PQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL 160
P +R I + +RQ LLFSATF K I++L +L P I A IT VV +
Sbjct: 179 PDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPV 238
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K L+ ++ + +L+F K
Sbjct: 239 DRQRKRELLSF-MIGSKNWRQVLVFTRTK 266
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 103 (41.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSAT+ + I +LA + L ++ + +V G +G A +D+ Q V+ + + K+
Sbjct: 458 KEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKM--- 514
Query: 170 THNLVEFLSTGS---LLIFV-TKK 189
L+E L + +IFV TKK
Sbjct: 515 -EKLLEILKSSEKERTMIFVNTKK 537
Score = 83 (34.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ V+G D P + +F E L + + + Y TP+Q ++P ++GRD++
Sbjct: 262 VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLM 315
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 143 (55.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 36/118 (30%), Positives = 66/118 (55%)
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDI-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLA 131
+ C+ T+ + + A D+ E Q+ +I + R ++QT + SATF I+ +A
Sbjct: 863 ISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMA 922
Query: 132 RDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +L PI+I+ G+ G+ N +I Q V + +++K+ L L E++ G +LIFV K+
Sbjct: 923 KKLLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQ 980
Score = 124 (48.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSG-ITVSGADPPYPVSSFGHFGFD 66
++H I Y ++KN Y ++I + + R +G I V G + P PV F G
Sbjct: 672 VNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLP 731
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+++ L K + IQ Q +PA + GRD+I
Sbjct: 732 SKILQILEKKNFKKMYNIQMQTIPALMCGRDVI 764
Score = 43 (20.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 98 IIEPQVRSICDHVRPNRQT-LLFSAT---FKKRI--EKLARDVLTDPIK 140
I E + + +H++ ++ L+F+ T KK++ K+ D + + I+
Sbjct: 1309 IAEKEALKVTEHIKDEKEKKLIFNKTKEDIKKKLIQNKIQSDTMNESIQ 1357
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 143 (55.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 36/118 (30%), Positives = 66/118 (55%)
Query: 73 LRKCEYTSPTPIQAQAVPAALSGRDI-IEPQVRSICDHVRPNRQTLLFSATFKKRIEKLA 131
+ C+ T+ + + A D+ E Q+ +I + R ++QT + SATF I+ +A
Sbjct: 863 ISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMA 922
Query: 132 RDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +L PI+I+ G+ G+ N +I Q V + +++K+ L L E++ G +LIFV K+
Sbjct: 923 KKLLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQ 980
Score = 124 (48.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 8 IDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSG-ITVSGADPPYPVSSFGHFGFD 66
++H I Y ++KN Y ++I + + R +G I V G + P PV F G
Sbjct: 672 VNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLP 731
Query: 67 EVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+++ L K + IQ Q +PA + GRD+I
Sbjct: 732 SKILQILEKKNFKKMYNIQMQTIPALMCGRDVI 764
Score = 43 (20.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 98 IIEPQVRSICDHVRPNRQT-LLFSAT---FKKRI--EKLARDVLTDPIK 140
I E + + +H++ ++ L+F+ T KK++ K+ D + + I+
Sbjct: 1309 IAEKEALKVTEHIKDEKEKKLIFNKTKEDIKKKLIQNKIQSDTMNESIQ 1357
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 92 (37.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGE--ANTDITQVV 157
RQTL+F+AT+ K + +LA + +PIK+ G+ + AN ITQ+V
Sbjct: 288 RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIV 333
Score = 91 (37.1 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 18 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGA-DPPY-PVSSFGHFGFDEVLMKALRK 75
V FY E + L + E ++ I V + D P+ SF + D + + K
Sbjct: 72 VASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK 131
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
+ PTPIQA A P LSG+D++
Sbjct: 132 --FPKPTPIQAVAWPYLLSGKDVV 153
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 95 (38.5 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINLPQTQKLTWL 169
+ RQTL+FSATF + I++LA + L ++ + + G +G A D+ Q + + Q K L
Sbjct: 470 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKL 529
Query: 170 THNLVEFLSTGSLLIFV-TKK 189
++ + ++FV TKK
Sbjct: 530 LE-ILRNIGDERTMVFVETKK 549
Score = 90 (36.7 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 274 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLM 327
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 93 (37.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF F +++ L +T+PTPIQ + +P AL G+DI+
Sbjct: 299 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIV 339
Score = 93 (37.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 28/93 (30%), Positives = 52/93 (55%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDIT--QVVIN 159
++ I + +RQT+LFSAT ++KL R L P++++ + NT +T Q +
Sbjct: 464 ELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDT--KKNTAVTLVQEFVR 521
Query: 160 L-P--QTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
L P + ++L +L H L + + TG +++F +K
Sbjct: 522 LRPGREDKRLGYLLH-LCKEVYTGRVIVFFRQK 553
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 100 (40.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 16 EEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 75
+E+ K Q + + T + + L++ + + P +F L+KA++K
Sbjct: 151 KEINKKQQQQQQQSNKQTTDKIKVLQSNRKLKKI-VEEELP--TFEELHLSRPLLKAVQK 207
Query: 76 CEYTSPTPIQAQAVPAALSGRDII 99
++ PTPIQA+A+P AL+G+DI+
Sbjct: 208 LGFSQPTPIQAKAIPLALNGKDIL 231
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINL- 160
++ I + NRQT+LFSAT ++ LA+ L PI++ + + + + Q + +
Sbjct: 356 EINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIK 415
Query: 161 PQ--TQKLTWLTHNLVEFLSTGSLLIFVTKK 189
PQ + + L + G +IF K
Sbjct: 416 PQHLSDRPAILLSLCTRVFNQGGTIIFCRSK 446
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 93 (37.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINL-P--QTQKL 166
+ RQTLLFSATF + I++LA + L ++ + + G +G A D+ Q ++ + P + +KL
Sbjct: 457 KEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKL 516
Query: 167 TWLTHNLVE-----FLSTGSLLIFV-TKKCFELVNLIA-----KNYWLIQAVGILMCPKS 215
+ N+ + F+ T F+ T C E ++ + + QA+G C K
Sbjct: 517 VEILRNIGDERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 576
Query: 216 P 216
P
Sbjct: 577 P 577
Score = 91 (37.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLM 314
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 93 (37.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 111 RPNRQTLLFSATFKKRIEKLARDVL-TDPIKIVQGDIGEANTDITQVVINL-P--QTQKL 166
+ RQTLLFSATF + I++LA + L ++ + + G +G A D+ Q ++ + P + +KL
Sbjct: 457 KEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKL 516
Query: 167 TWLTHNLVE-----FLSTGSLLIFV-TKKCFELVNLIA-----KNYWLIQAVGILMCPKS 215
+ N+ + F+ T F+ T C E ++ + + QA+G C K
Sbjct: 517 VEILRNIGDERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 576
Query: 216 P 216
P
Sbjct: 577 P 577
Score = 91 (37.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+ VSG D P + +F + L + K YT TP+Q ++P L+GRD++
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLM 314
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 107 (42.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 18 VEKNFYQ-PHEDIARLTPQEAQELRAKSGITV-------SGADPPYPVSSFGH-FGFDEV 68
+ ++ Y+ P+E L+P++ QEL G+ S P PV+SF FG +
Sbjct: 36 IVRDLYKIPNEQ-KNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSNAS 94
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+M +RK + P+PIQ+Q P LSG+D I
Sbjct: 95 IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
Score = 71 (30.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANT-DITQVVI 158
E +R I +RP+R L SAT+ + + KL + + V G + + +TQ
Sbjct: 254 EVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFE 313
Query: 159 NLPQTQKLTWLTHNLVEFLSTG-----SLLIFVTKK 189
+P + + +V FL+ ++IFV K
Sbjct: 314 FVPHDSRFLRVCE-IVNFLTAAHGQNYKMIIFVKSK 348
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 100 EPQVRSIC--DHVRPN--RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQ 155
EPQ+R I D + P R T++FSATF K I+ LARD L + I + G +G + +ITQ
Sbjct: 103 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 162
Query: 156 VVINLPQTQKLTWLTHNLVEFLSTGSLLIFV-TKK 189
V+ + K ++L L S L+FV TKK
Sbjct: 163 KVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKK 197
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 102 (41.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
++ I DH+ Q LFSAT I K+A L DP I + +A +ITQ +
Sbjct: 179 IQWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSG 238
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFV 186
K+T L + E + +++IFV
Sbjct: 239 ITKMTAL-ERIAEVVEYDAMIIFV 261
Score = 77 (32.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G E L+ A+ +TS T IQA +P L+G+D++
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVL 56
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 92 (37.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V +F G E L+KA + + +P+ IQA+A+P AL G+D+I
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVI 50
Score = 85 (35.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVIN 159
E + I + + R+T LFSAT K++ KL R L +P+KI + Q
Sbjct: 182 EKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRF 241
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKKC 190
+ K +L + L E + S+ IF T+ C
Sbjct: 242 VAAKYKDCYLVYILSEMPESTSM-IF-TRTC 270
>UNIPROTKB|H0YI52 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:17347 EMBL:AC117498
Ensembl:ENST00000552802 Uniprot:H0YI52
Length = 152
Score = 111 (44.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 46 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
IT G P P+ S+ +++ + KC Y PTPIQ QA+P L RDII
Sbjct: 5 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 58
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 106 (42.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 34/96 (35%), Positives = 51/96 (53%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEAN-TDITQVVIN 159
Q+ I + +RQTLLFSAT K+++ LAR L DP I V + A T + Q V+
Sbjct: 238 QLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMI 297
Query: 160 LPQTQKLTWLTHNLVEFLSTGSLLIFVTKKCFELVN 195
+P +KL L + L++ L+ TKK + V+
Sbjct: 298 VPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVH 333
Score = 72 (30.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 57 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
V F + + L+ +Y T +Q+ A+P AL GRDI+
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDIL 112
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANT 151
+PQ+ +I + RQTLLFSATF ++I+ +A+ ++ +P+ + E NT
Sbjct: 162 QPQLDAIIEQSPRERQTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNT 213
Score = 76 (31.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
L++ L Y TPIQAQ++PA L+G D+I
Sbjct: 12 LLENLSSMGYNEMTPIQAQSLPAILAGEDVI 42
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANT 151
+PQ+ +I + RQTLLFSATF ++I+ +A+ ++ +P+ + E NT
Sbjct: 162 QPQLDAIIEQSPRERQTLLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNT 213
Score = 76 (31.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 69 LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
L++ L Y TPIQAQ++PA L+G D+I
Sbjct: 12 LLENLSSMGYNEMTPIQAQSLPAILAGEDVI 42
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 89 (36.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F F LMKA+ + + TPIQAQ +P LS +D+I
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVI 44
Score = 87 (35.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDP--IKIVQGDIGEANTDITQVVINL 160
+ SI +V QTLLFSAT I+++A +T+P +K+ ++ +N I Q + +
Sbjct: 166 IESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSN--IQQFYLEV 223
Query: 161 PQTQKLTWLTHNLVEFLSTGSLLIF 185
+ +K LT L++ S ++F
Sbjct: 224 QERKKFDTLTR-LLDIQSPELAIVF 247
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQ 162
+ I + + +RQ LLFSAT + + LA+ + P++I G + I Q ++ + +
Sbjct: 173 INKIIERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDK 232
Query: 163 TQKLTWLTHNLVEFLSTGSLLIFVTKK--CFELVNLIAK 199
K L+H ++ + LIF+ K +LV+ + K
Sbjct: 233 ANKSALLSH-IITTQNWQQALIFIETKHGAAKLVSQLEK 270
Score = 81 (33.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF ++ A+ YT PT IQ +A+P L+G+DII
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDII 42
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 94 (38.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 31/99 (31%), Positives = 47/99 (47%)
Query: 106 ICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQK 165
I +H P RQ LFSAT ++I+++A L + I I Q + + Q K
Sbjct: 172 ILEHTPPQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNK 231
Query: 166 LTWLTHNLVEFLSTGSLLIFVTKK--CFELVN-LIAKNY 201
L L ++E +T ++IFV + C EL L A+ Y
Sbjct: 232 LEALVR-VLEVENTEGIIIFVRTRNSCVELAEKLEARGY 269
Score = 83 (34.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F G E L++AL + Y PTPIQ+ ++ ++G+DI+
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDIL 47
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 90 (36.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 35 QEAQELRAKSGITVSGADPPYPVSSFGH----FGFDEVLMKALRKCEYTSPTPIQAQAVP 90
+E R K I V G D P P++ F F + L+ + + Y P+PIQ Q +P
Sbjct: 172 REIATFRNKHRIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIP 231
Query: 91 AALSGRDII 99
L R+++
Sbjct: 232 ILLKEREVV 240
Score = 88 (36.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 112 PNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTH 171
P + LFSAT +++E+L ++ +PIKI+ G+ A + Q +I + + +
Sbjct: 373 PKLKICLFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVR 432
Query: 172 NLVEFLSTGSLLIFVTKK 189
L++ +LIF K
Sbjct: 433 QLIQKGLEPPILIFTQSK 450
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 101 (40.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 103 VRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKI-VQGDIGEANTDITQ---VVI 158
V ++ H+ RQTLLFSAT K++ LAR L DP + V + A Q +V
Sbjct: 216 VDALVQHLPTTRQTLLFSATQSKKVSDLARLSLKDPEYVSVHAEATTATPSTLQQHYIVT 275
Query: 159 NLPQTQKLTW------LTHNLVEFLSTGSLLIFV 186
LP+ W L +V FLS+G + FV
Sbjct: 276 PLPEKLDTLWGFIKANLKSKMVVFLSSGKQVRFV 309
Score = 77 (32.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
+F E K +R + + T IQA+A+P AL GRDI+
Sbjct: 50 AFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDIL 90
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 92 (37.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 100 EPQVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQG--DIGEANTDITQVV 157
E Q+ I VRP+RQT++ +A++ +LA+ L P+ + G D+ NT + Q +
Sbjct: 366 EHQIMKILLDVRPDRQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNT-VKQNI 424
Query: 158 INLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
I + +K + + L +++FV++K
Sbjct: 425 IVTTEEEKRSLVKEFLQSLSPKDKVIVFVSRK 456
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 5 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHF 63
LPPI + + + + + +I R +E +R +T P P P +F
Sbjct: 150 LPPIKKNLYIESKATHSLSEAQVEIWR---KENFNIRCDD-LTEGEKRPIPKPTCTFED- 204
Query: 64 GFDEV--LMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F + +M+++R+ + PTPIQ+Q+ P L G D+I
Sbjct: 205 AFQQYPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLI 242
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 93 (37.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV---VI 158
+++++ V RQTLLFSAT I ++++L DP +I ++ + NT Q+ V
Sbjct: 169 EIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRI---EVAKPNTTAAQIEQRVY 225
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K +++H LV + +LIF K
Sbjct: 226 AIDSDRKTEFVSH-LVRSKNWQQVLIFSRTK 255
Score = 78 (32.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF + L+ L + Y PTPIQ +A+PA L+ +D++
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVM 42
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 93 (37.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 102 QVRSICDHVRPNRQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQV---VI 158
+++++ V RQTLLFSAT I ++++L DP +I ++ + NT Q+ V
Sbjct: 169 EIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRI---EVAKPNTTAAQIEQRVY 225
Query: 159 NLPQTQKLTWLTHNLVEFLSTGSLLIFVTKK 189
+ +K +++H LV + +LIF K
Sbjct: 226 AIDSDRKTEFVSH-LVRSKNWQQVLIFSRTK 255
Score = 78 (32.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 59 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
SF + L+ L + Y PTPIQ +A+PA L+ +D++
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVM 42
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 94 (38.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F G ++KA+ + Y +P+PIQ QA+PA L+G+D++
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVM 42
Score = 78 (32.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQ LLFSATF I +LA+ ++ +P++I + Q + +K L L
Sbjct: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLV-KL 237
Query: 174 VEFLSTGSLLIFVTKK 189
V+ + +L+F+ K
Sbjct: 238 VKEGNWQQVLVFMRTK 253
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 94 (38.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 60 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDII 99
F G ++KA+ + Y +P+PIQ QA+PA L+G+D++
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVM 42
Score = 78 (32.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 114 RQTLLFSATFKKRIEKLARDVLTDPIKIVQGDIGEANTDITQVVINLPQTQKLTWLTHNL 173
RQ LLFSATF I +LA+ ++ +P++I + Q + +K L L
Sbjct: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLV-KL 237
Query: 174 VEFLSTGSLLIFVTKK 189
V+ + +L+F+ K
Sbjct: 238 VKEGNWQQVLVFMRTK 253
WARNING: HSPs involving 81 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 222 0.00096 112 3 11 22 0.38 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 331
No. of states in DFA: 598 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.72u 0.11s 20.83t Elapsed: 00:00:01
Total cpu time: 20.74u 0.11s 20.85t Elapsed: 00:00:01
Start: Thu Aug 15 13:40:05 2013 End: Thu Aug 15 13:40:06 2013
WARNINGS ISSUED: 2