RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17638
(160 letters)
>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 54.8 bits (131), Expect = 3e-11
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
P V + G ++ L W +PEQPNG+++ Y+IKY +
Sbjct: 3 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKE------MQSYSTLKA 56
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
TT A ++GL+P T+Y + T AG G
Sbjct: 57 VTTRATVSGLKPGTRYVFQVRARTSAGCG 85
>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 106
Score = 54.1 bits (129), Expect = 7e-11
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VPG V L + ++ + W +P + NG+L GY+I ++ T R+ +
Sbjct: 10 VPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTN-----TRVTHYLPN 64
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
T ++ GL T Y I +A T G G
Sbjct: 65 VTLEYRVTGLTALTTYTIEVAAMTSKGQG 93
>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 103
Score = 51.7 bits (123), Expect = 4e-10
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 14 EALVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 73
E +PG +L A ++ + W P NG + YK+ Y K
Sbjct: 7 EVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKE--------QD 58
Query: 74 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
D ++ S + GL+ T+Y + Y K G G
Sbjct: 59 VDVSSHSYTINGLKKYTEYSFRVVAYNKHGPG 90
>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 117
Score = 48.7 bits (115), Expect = 1e-08
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VPG + + +++ L W P PNG+++ Y+I ++ T +E + P
Sbjct: 20 VPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE----VLAP 75
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ GL+P + Y + T+ G G
Sbjct: 76 SARQYTATGLKPESVYLFRITAQTRKGWG 104
>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein
phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 45.5 bits (107), Expect = 9e-08
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VPG + +A P ++ L W P + + Y++ Y+ + + I+
Sbjct: 10 VPGQPLNFKAEPESETSILLSWTPPR--SDTIANYELVYKDGEHGEE-------QRITIE 60
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
TS +L GL+P++ Y LA + G GA
Sbjct: 61 PGTSYRLQGLKPNSLYYFRLAARSPQGLGA 90
>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like
protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 44.5 bits (104), Expect = 2e-07
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 13 LEALVPGTVQSLEAIPLGSSAFYLKWVKPEQP--NGVLMGYKIKYQSVKGTKVGPLLERL 70
EA G + P+ S + + W P++ NGV+ GY+I Y+ G +
Sbjct: 4 EEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV 62
Query: 71 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
+ + L L+ +Y + + + +AG G
Sbjct: 63 EMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGP 98
>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein
phosphatase F, PTPRF {Human (Homo sapiens) [TaxId:
9606]}
Length = 94
Score = 43.7 bits (102), Expect = 4e-07
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
PG + + ++A L+W P++ G L+GY+++Y
Sbjct: 1 PGRPTMMISTTAMNTAL-LQWHPPKELPGELLGYRLQYCRADEA------RPNTIDFGKD 53
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ GL T Y LA +AG G
Sbjct: 54 DQHFTVTGLHKGTTYIFRLAAKNRAGLG 81
>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 43.7 bits (102), Expect = 5e-07
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 75
+P + + A + + L W P P+G + Y + Y + ER+ S
Sbjct: 10 LPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIAR-----ERVENTSH 64
Query: 76 PTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
P + L P+T Y + K G G
Sbjct: 65 PGEMQVTIQNLMPATVYIFRVMAQNKHGSG 94
>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 120
Score = 43.7 bits (102), Expect = 8e-07
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 21 VQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTS 80
V+ + L + + W + + GY++ Y+ G + + L PT S
Sbjct: 19 VRLHNPVVLTPTTVQVTWTVD-RQPQFIQGYRVMYRQTSGLQATSSWQNL-DAKVPTERS 76
Query: 81 AKLAGLEPSTKYRIHLAGYTKAGDGA 106
A L L+ Y I + Y G
Sbjct: 77 AVLVNLKKGVTYEIKVRPYFNEFQGM 102
>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 125
Score = 43.0 bits (100), Expect = 2e-06
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 14 EALVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGT--KVGPLLER 69
E L ++ + S+ + W V + G L GY+I Y + + + +E+
Sbjct: 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEK 70
Query: 70 LPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ T L GLEP + Y +++ G+G
Sbjct: 71 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG 106
>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 111
Score = 40.7 bits (94), Expect = 6e-06
Identities = 14/89 (15%), Positives = 30/89 (33%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
+PG +L +G + L++ + + ++ Q + L ++P
Sbjct: 10 LPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEP 69
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
S ++ L P T Y + G
Sbjct: 70 DARSMEVPDLNPFTCYSFRMRQVNIVGTS 98
>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 196
Score = 42.1 bits (97), Expect = 7e-06
Identities = 13/89 (14%), Positives = 20/89 (22%), Gaps = 11/89 (12%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
P ++ SS LKW P PNG + Y + ++
Sbjct: 2 NPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSE-----------LF 50
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
PS +
Sbjct: 51 ELDYCLKGLKLPSRTWSPPFESEDSQKHN 79
Score = 33.6 bits (75), Expect = 0.005
Identities = 10/89 (11%), Positives = 19/89 (21%), Gaps = 7/89 (7%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
+ ++ + P + P+
Sbjct: 100 ILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHR-------PFEKVV 152
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
S ++GL T YRI L +
Sbjct: 153 NKESLVISGLRHFTGYRIELQACNQDTPE 181
>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 41.0 bits (95), Expect = 7e-06
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 13 LEALVPGTVQSLEAIPLGSSAFYLKW--VKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL 70
L + Q+L S + + W P NG + GYKI+Y+ +
Sbjct: 7 LSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKS-----DVT 61
Query: 71 PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ T S + GL+ T+Y +A T G G
Sbjct: 62 ETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTG 96
>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 92
Score = 40.2 bits (93), Expect = 7e-06
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
++L +++ L+W + YK+ Y ++ G + E L TT
Sbjct: 5 KNLRVGSRTATSLDLEW---DNSEAEAQEYKVVYSTLAGEQYH---EVLVPKGIGPTTKT 58
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
L L P T+Y + ++ + + RT
Sbjct: 59 TLTDLVPGTEYGVGISAVMNSKQSIPATMNART 91
>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human
(Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 40.2 bits (93), Expect = 8e-06
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
+ LE + ++ + W + P + Y+I Y G + + ++A
Sbjct: 1 RDLEVVAATPTSLLISW---DAPAVTVRYYRITYGETGGNS-----PVQEFTVPGSKSTA 52
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDG 105
++GL+P Y I + T GD
Sbjct: 53 TISGLKPGVDYTITVYAVTGRGDS 76
>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 111
Score = 40.3 bits (93), Expect = 1e-05
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P ++ + + W P + NG + GY I Y + + + +
Sbjct: 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNA---EIHDWVIEPVVGN 70
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ ++ L T Y + G G
Sbjct: 71 RLTHQIQELTLDTPYYFKIQARNSKGMG 98
>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 39.4 bits (91), Expect = 1e-05
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
++ + +++F + W P + GY+I++ + + S
Sbjct: 5 TGIDFSDITANSFTVHW---IAPRATITGYRIRHHPEHFSG-----RPREDRVPHSRNSI 56
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
L L P T+Y + + + + T
Sbjct: 57 TLTNLTPGTEYVVSIVALNGREESPLLIGQQST 89
>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo
sapiens) [TaxId: 9606]}
Length = 103
Score = 39.7 bits (91), Expect = 2e-05
Identities = 20/89 (22%), Positives = 32/89 (35%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VP L + S+ L W +P + NG + Y++ Y V + + +P
Sbjct: 2 VPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNP 61
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ L S YR + AG G
Sbjct: 62 KNRMLLIENLRESQPYRYTVKARNGAGWG 90
>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 123
Score = 39.2 bits (90), Expect = 3e-05
Identities = 10/99 (10%), Positives = 22/99 (22%), Gaps = 11/99 (11%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERL------ 70
PG ++ +L W P P+G ++ Y + +
Sbjct: 7 GPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYC 65
Query: 71 ----PYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ ++ + G G
Sbjct: 66 GLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYG 104
>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 125
Score = 39.2 bits (90), Expect = 3e-05
Identities = 15/108 (13%), Positives = 26/108 (24%), Gaps = 19/108 (17%)
Query: 21 VQSLEAIPLGSSAFYLKWVKPE-QPNGVLMGYKIKYQSVKGTKVG--------------- 64
+ I L+W L+G+ + Y+ V
Sbjct: 5 LLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTV 64
Query: 65 ---PLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYF 109
R + GL+P T+Y I + D +
Sbjct: 65 VDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTY 112
>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 38.4 bits (88), Expect = 4e-05
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P TV + + + L W +PEQPNG+++ Y+I+Y + E ++
Sbjct: 1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN------EFNSSMARSQ 54
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
T +A++ GL P Y + + T AG G
Sbjct: 55 TNTARIDGLRPGMVYVVQVRARTVAGYGK 83
>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 117
Score = 37.6 bits (86), Expect = 1e-04
Identities = 12/89 (13%), Positives = 23/89 (25%), Gaps = 5/89 (5%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
+PG + + ++ L W ++ +
Sbjct: 15 LPGPPSKPQVTDVTKNSVTLSWQPGTP-----GTLPASAYIIEAFSQSVSNSWQTVANHV 69
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
TT + GL P+T Y + G
Sbjct: 70 KTTLYTVRGLRPNTIYLFMVRAINPQGLS 98
>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing
protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 36.2 bits (82), Expect = 3e-04
Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P S G + L+W KP I + + G D
Sbjct: 1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGF-----KPKYDGE 55
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ + L STKY+ + Y G
Sbjct: 56 DLAYTVKNLRRSTKYKFKVIAYNSEGKS 83
>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 108
Score = 36.3 bits (83), Expect = 3e-04
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P ++ Y+ W+ + ++++Y+ +K P+
Sbjct: 11 PEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDW---ILATSAIPPS 67
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
S ++ GLE Y+ + G+
Sbjct: 68 RLSVEITGLEKGISYKFRVRALNMLGESE 96
>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein
3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 36.3 bits (83), Expect = 4e-04
Identities = 16/123 (13%), Positives = 32/123 (26%), Gaps = 8/123 (6%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPN-----GVLMGYKIKYQSVKGTKVGPLLERLP 71
+ + A + + L W P + Y+ + + +
Sbjct: 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYK 74
Query: 72 YISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGADY-FIEHRTRGTDNVAPGKPNFKLV 130
+ T+ L L+P+ Y + + G T + P P
Sbjct: 75 SVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGP 134
Query: 131 RSG 133
SG
Sbjct: 135 SSG 137
>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing
protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 35.6 bits (81), Expect = 4e-04
Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 6/90 (6%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
P ++ L+W P + + +++ KG
Sbjct: 10 EPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN------GEFCQCYMG 63
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
+ K+ L P+ + L+ G
Sbjct: 64 SQKQFKITKLSPAMGCKFRLSARNDYGTSG 93
>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1.
{Bacillus circulans [TaxId: 1397]}
Length = 88
Score = 34.4 bits (78), Expect = 0.001
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 14/89 (15%)
Query: 16 LVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISD 75
+ P +L + +S+ L W GV ++ T
Sbjct: 2 MAPTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALATT-------------- 47
Query: 76 PTTTSAKLAGLEPSTKYRIHLAGYTKAGD 104
T T+A ++GL T Y + AG+
Sbjct: 48 VTGTTATISGLAADTSYTFTVKAKDAAGN 76
>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 100
Score = 34.6 bits (78), Expect = 0.001
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
++A L + W P + Y T + ++ T
Sbjct: 2 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPA--NTKYKNANAT 59
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
T S + GL+P+T Y +
Sbjct: 60 TLSYLVTGLKPNTLYEFSVMVTKGRRSST 88
>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 108
Score = 34.4 bits (78), Expect = 0.001
Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 23 SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 82
+ A L W KP N L+ Y ++ L DP TS
Sbjct: 18 VATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPW-----TVLLASVDPKATSVT 72
Query: 83 LAGLEPSTKYRIHLAGYTKAGDGA 106
+ GL P+ Y+ L G G
Sbjct: 73 VKGLVPARSYQFRLCAVNDVGKGQ 96
>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 87
Score = 34.1 bits (77), Expect = 0.001
Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 10/93 (10%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
+ LE + L+W +P + K P +TS
Sbjct: 4 KDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEMEIP----------VDSTSF 53
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
L GL+ T+Y I L I+ T
Sbjct: 54 ILRGLDAGTEYTISLVAEKGRHKSKPTTIKGST 86
>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules
{Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.7 bits (76), Expect = 0.002
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Query: 30 GSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPS 89
+ + W + P+ + GY+I G + L E + +S L P
Sbjct: 15 DTGVLTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVH----ADQSSCTFDNLSPG 68
Query: 90 TKYRIHLAGYTKAGDG 105
+Y + + +
Sbjct: 69 LEYNVSVYTVKDDKES 84
>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human
(Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.3 bits (75), Expect = 0.002
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 8/93 (8%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
+ L + + + W P+ Y++ Y S + L D +A
Sbjct: 6 KGLAFTDVDVDSIKIAWESPQGQVS---RYRVTYSSPEDGI-----HELFPAPDGEEDTA 57
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
+L GL P ++Y + + + T
Sbjct: 58 ELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90
>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 32.3 bits (72), Expect = 0.006
Identities = 12/88 (13%), Positives = 24/88 (27%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P +L S L W P P+ L + ++
Sbjct: 2 PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEP 61
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ + L+ YR + + +A +
Sbjct: 62 SLRIAASTLKSGISYRARVRAWAQAYNT 89
>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId:
9606]}
Length = 93
Score = 32.1 bits (72), Expect = 0.006
Identities = 12/42 (28%), Positives = 13/42 (30%)
Query: 75 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRTRG 116
TS +L GL PST Y L T G
Sbjct: 49 PGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90
>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 88
Score = 31.8 bits (71), Expect = 0.008
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 9/87 (10%)
Query: 19 GTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTT 78
G+ + + + ++ + W P + Y++ Y + G D +
Sbjct: 2 GSPKGISFSDITENSATVSW---TPPRSRVDSYRVSYVPITGG------TPNVVTVDGSK 52
Query: 79 TSAKLAGLEPSTKYRIHLAGYTKAGDG 105
T KL L P Y +++ +
Sbjct: 53 TRTKLVKLVPGVDYNVNIISVKGFEES 79
>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 31.9 bits (71), Expect = 0.010
Identities = 17/98 (17%), Positives = 25/98 (25%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
+ L + +S+ L W P + L + +
Sbjct: 3 SRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPG 62
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
T SA L L T Y + L G RT
Sbjct: 63 TRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100
>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3
repeats {Drosophila melanogaster [TaxId: 7227]}
Length = 105
Score = 31.5 bits (70), Expect = 0.013
Identities = 8/84 (9%), Positives = 19/84 (22%), Gaps = 2/84 (2%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
++ + + W + + + I D +
Sbjct: 9 DNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN--NIFDWRQNNI 66
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDG 105
+A KY I + G+
Sbjct: 67 VIADQPTFVKYLIKVVAINDRGES 90
>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.7 bits (68), Expect = 0.022
Identities = 11/84 (13%), Positives = 24/84 (28%), Gaps = 8/84 (9%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
L+ + ++ +W P + K P ++S
Sbjct: 4 TDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKE--------INLAPDSSSV 55
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDG 105
++GL +TKY + +
Sbjct: 56 VVSGLMVATKYEVSVYALKDTLTS 79
>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 127
Score = 30.3 bits (67), Expect = 0.046
Identities = 15/109 (13%), Positives = 25/109 (22%), Gaps = 4/109 (3%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VP LE + L W + N + + I+Y+
Sbjct: 16 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPG----LWHHQTEVS 71
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRTRGTDNVAPGKP 125
T + L P Y + G + + P
Sbjct: 72 GTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNP 120
>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 101
Score = 29.6 bits (65), Expect = 0.062
Identities = 12/88 (13%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
+ + LKW+ N + Y + T + + +
Sbjct: 2 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGF-YIYYRPTDSDNDSDYKKDMVEGD 60
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
++ L+P T Y I + + + G+
Sbjct: 61 RYWHSISHLQPETSYDIKMQCFNEGGES 88
>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain,
domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 29.2 bits (64), Expect = 0.088
Identities = 7/83 (8%), Positives = 21/83 (25%), Gaps = 4/83 (4%)
Query: 23 SLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAK 82
++ A+ + W P N + ++ ++
Sbjct: 9 TVTAVARNPRWLSVTWQDPHSWNS---SFYRLRFELRYRAERSKTFT-TWMVKDLQHHCV 64
Query: 83 LAGLEPSTKYRIHLAGYTKAGDG 105
+ ++ + L + G G
Sbjct: 65 IHDAWSGLRHVVQLRAQEEFGQG 87
>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human
(Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 28.7 bits (63), Expect = 0.11
Identities = 8/57 (14%), Positives = 14/57 (24%)
Query: 49 MGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
I ++ + S + GL+P Y L + G
Sbjct: 26 QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQ 82
>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 86
Score = 28.3 bits (62), Expect = 0.13
Identities = 14/85 (16%), Positives = 20/85 (23%), Gaps = 10/85 (11%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSA 81
+ L ++ L W K P + P TS
Sbjct: 5 RDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVTVP----------RDRTSY 54
Query: 82 KLAGLEPSTKYRIHLAGYTKAGDGA 106
L LEP +Y I +
Sbjct: 55 TLTDLEPGAEYIISITAERGRQQSL 79
>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing
protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 93
Score = 28.5 bits (62), Expect = 0.15
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P + + ++ + W P + Y++++ V+G+
Sbjct: 1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQ--------ICYCGP 52
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
S ++ GL P+T Y + + G G
Sbjct: 53 GLSYEIKGLSPATTYYCRVQALSVVGAG 80
>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains
1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 120
Score = 28.9 bits (63), Expect = 0.15
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Query: 14 EALVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 73
+ + + + L W ++ + S++ + Y
Sbjct: 12 KVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY- 70
Query: 74 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGA 106
T + GLEP T Y+ L + +G+
Sbjct: 71 -TGYATRHVVEGLEPRTLYKFRLKVTSPSGEYE 102
>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3
repeats {Drosophila melanogaster [TaxId: 7227]}
Length = 100
Score = 28.0 bits (61), Expect = 0.21
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
VP + A + W + ++ Y I++ T P Y P
Sbjct: 5 VPNAPKLTGITCQADKA-EIHWEQQGDNRSPILHYTIQFN----TSFTPASWDAAYEKVP 59
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
T S+ + + P Y + + K G
Sbjct: 60 NTDSSFVVQMSPWANYTFRVIAFNKIGAS 88
>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 27.9 bits (61), Expect = 0.25
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 9/88 (10%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
+ SL+ + L W N G + Y+ + L + +
Sbjct: 3 SLSGLSLKLVKKEPRQLELTWAGSRPRNP---GGNLSYE------LHVLNQDEEWHQMVL 53
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
L L+P T Y + + T G G
Sbjct: 54 EPRVLLTKLQPDTTYIVRVRTLTPLGPG 81
>d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium
tetanomorphum [TaxId: 1553]}
Length = 253
Score = 28.0 bits (62), Expect = 0.42
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 1/54 (1%)
Query: 55 YQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGADY 108
+V+ K+G E+L + H+ Y G D
Sbjct: 37 INNVEE-KLGLKGEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGAAFDV 89
>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 95
Score = 26.6 bits (57), Expect = 0.72
Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 15 ALVPGTV-QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 73
AL P V + LE +A L W + Y + I
Sbjct: 3 ALDPMPVPELLEIEEYSETAVVLHWSLASDADE---HLITGYYAYYRPSSSAGEYFKATI 59
Query: 74 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
S K+A LE +T Y L ++ A
Sbjct: 60 EGAHARSFKIAPLETATMYEFKLQSFSAASAS 91
>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 107
Score = 26.5 bits (57), Expect = 0.72
Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 7/91 (7%)
Query: 22 QSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYIS------- 74
L + L+W+ P ++ +K++Y+ V K
Sbjct: 4 TPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSE 63
Query: 75 DPTTTSAKLAGLEPSTKYRIHLAGYTKAGDG 105
+ +A + L+P YR + D
Sbjct: 64 LGKSFTASVTDLKPQHTYRFRILAVYSNNDN 94
>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3
and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 26.5 bits (57), Expect = 0.75
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 5/95 (5%)
Query: 17 VPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDP 76
+ SL+ G S + + ++I+Y+ T +
Sbjct: 4 IQMAPPSLQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDS-----KTETLQ 58
Query: 77 TTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIE 111
S L LEPST+Y + T + E
Sbjct: 59 NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSE 93
>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing
protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 97
Score = 26.0 bits (56), Expect = 1.2
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 30 GSSAFYLKWVKPEQPNGV-LMGYKIKYQSVKGTKVGPLLERLPYISDPTTTSAKLAGLEP 88
+ L+W P G + Y ++ ++ + + + ++ L P
Sbjct: 15 KAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEP-------REVYQGSEVECTVSSLLP 67
Query: 89 STKYRIHLAGYTKAGDGA 106
Y L K G G
Sbjct: 68 GKTYSFRLRAANKMGFGP 85
>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM
{Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 25.4 bits (54), Expect = 1.7
Identities = 10/97 (10%), Positives = 32/97 (32%), Gaps = 6/97 (6%)
Query: 18 PGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYISDPT 77
P + + ++ + +K + + Y ++Y+++ +
Sbjct: 1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW------KPEIRLPSG 54
Query: 78 TTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRT 114
+ L L+ + +Y +++ + G RT
Sbjct: 55 SDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 91
>d1i7qa_ d.161.1.1 (A:) Anthranilate synthase
aminodeoxyisochorismate synthase/lyase subunit, TrpE
{Serratia marcescens [TaxId: 615]}
Length = 517
Score = 25.8 bits (55), Expect = 2.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 70 LPYISDPTTTSAKLAGLEPST 90
Y DPTT +L G P+T
Sbjct: 12 ASYRGDPTTLFHQLCGARPAT 32
>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 23.9 bits (50), Expect = 6.4
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 14 EALVPGTVQSLEAIPLGSSAFYLKWVKPEQPNGVLMGYKIKYQSVKGTKVGPLLERLPYI 73
E VP SL P ++ + W PE N V+ GY I Y
Sbjct: 17 ETRVPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-------TIK 68
Query: 74 SDPTTTSAKLAGLEPSTKYRIHLAGYTKAGDGADYFIEHRTR 115
D + L+PS+ Y I L + G+G + TR
Sbjct: 69 VDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR 110
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 24.3 bits (52), Expect = 8.5
Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 77 TTTSAKLAGLEPSTKYRIHLAG-YTKAGDGADYFIEHRTRGTDNVAPGKPN 126
TT+ KLA + + LA T + R V
Sbjct: 25 TTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEG 75
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.137 0.423
Gapped
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 618,188
Number of extensions: 27518
Number of successful extensions: 126
Number of sequences better than 10.0: 1
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 61
Length of query: 160
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 82
Effective length of database: 1,336,656
Effective search space: 109605792
Effective search space used: 109605792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)