BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1764
(498 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2B0U|C Chain C, The Structure Of The Follistatin:activin Complex
pdb|2B0U|D Chain D, The Structure Of The Follistatin:activin Complex
pdb|3HH2|C Chain C, Crystal Structure Of The Myostatin:follistatin 288 Complex
pdb|3HH2|D Chain D, Crystal Structure Of The Myostatin:follistatin 288 Complex
Length = 288
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 2 GQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGV-QCQPCKKTC 60
++GRC L ++ +EECC L +W++ED+ T+F W + GG C PCK+TC
Sbjct: 8 AKNGRCQVLYKTELSKEECCSTGR-LSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETC 66
Query: 61 ENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKN 119
EN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C++
Sbjct: 67 ENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARCKEQ 124
Query: 120 EVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGV 179
+ V Y G C+ +C V CP C++DQ +C C R C P+S +CG DGV
Sbjct: 125 PELEVQYQGRCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGV 183
Query: 180 TYESACHLREAACRRGKSIPIAYRGHC-KPGSCDRVTCPSGKFCILDQNL-IPHCNRCIR 237
TY SACHLR+A C G+SI +AY G C K SC+ + C GK C+ D + C+ C
Sbjct: 184 TYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDE 243
Query: 238 HCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
C SD VC +D TY S C ++EAAC G + + + G C
Sbjct: 244 LCPDSKSD-EPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 291 TFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKK-G 349
T+ G G DG TY + C L +A C+ + + Y+G CK+TC ++ C C + +
Sbjct: 97 TWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTN 156
Query: 350 YPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTC 409
C+ +CG+DG Y + C LRK C I + Y G C A +C
Sbjct: 157 NAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 216
Query: 410 ANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKAD 469
+IQC G+ CL D + G RC C CP +C S++ TY S C MK
Sbjct: 217 EDIQCTGGKKCLWDFKVGRGRCSLCD--ELCPDSKS---DEPVCASDNATYASECAMKEA 271
Query: 470 ECQQRIVIETKYSGPCH 486
C +++E K+SG C+
Sbjct: 272 ACSSGVLLEVKHSGSCN 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 329 CKQTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 387
CK+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K
Sbjct: 62 CKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN--ITWKGPVCGLDGKTYRNECALLKA 119
Query: 388 ACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGP 447
C++ + V Y G C+ TC ++ C TC+ D N + C TC+ CP
Sbjct: 120 RCKEQPELEVQYQGRCKK--TCRDVFCPGSSTCVVDQTNNA-YCVTCNRI--CPEPASS- 173
Query: 448 LPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
LCG++ VTY S C ++ C I Y G C
Sbjct: 174 -EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 210
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 65 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITWK-GPVCGLDGKTYRNECALLKARCK 122
Query: 270 RGKSIPIAYRGHCKLTESSI----------------------------KTFWGVWSGTDG 301
+ + Y+G CK T + + G DG
Sbjct: 123 EQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDG 182
Query: 302 VTYESACHLREAACRRGKSIPIAYRGHC--KQTCENIDCGEGKKCA--IKKGYPKC-ICA 356
VTY SACHLR+A C G+SI +AY G C ++CE+I C GKKC K G +C +C
Sbjct: 183 VTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCD 242
Query: 357 PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
C PVC SD Y + C +++ AC ++ V + G+C
Sbjct: 243 ELCPD--SKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 288
>pdb|2P6A|D Chain D, The Structure Of The Activin:follistatin 315 Complex
pdb|2P6A|C Chain C, The Structure Of The Activin:follistatin 315 Complex
Length = 315
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 161/285 (56%), Gaps = 9/285 (3%)
Query: 2 GQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGV-QCQPCKKTC 60
++GRC L ++ +EECC L +W++ED+ T+F W + GG C PCK+TC
Sbjct: 8 AKNGRCQVLYKTELSKEECCSTGR-LSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETC 66
Query: 61 ENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKN 119
EN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C++
Sbjct: 67 ENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARCKEQ 124
Query: 120 EVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGV 179
+ V Y G C+ +C V CP C++DQ +C C R C P+S +CG DGV
Sbjct: 125 PELEVQYQGRCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGV 183
Query: 180 TYESACHLREAACRRGKSIPIAYRGHC-KPGSCDRVTCPSGKFCILDQNL-IPHCNRCIR 237
TY SACHLR+A C G+SI +AY G C K SC+ + C GK C+ D + C+ C
Sbjct: 184 TYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDE 243
Query: 238 HCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
C SD VC +D TY S C ++EAAC G + + + G C
Sbjct: 244 LCPDSKSD-EPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 287
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 65 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITWK-GPVCGLDGKTYRNECALLKARCK 122
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTD 253
+ + Y+G CK +C V CP C++DQ +C C R C P+S +CG D
Sbjct: 123 EQPELEVQYQGRCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGND 181
Query: 254 GVTYESACHLREAACRRGKSIPIAYRGHCKLTES--------SIKTFWGVWSG------- 298
GVTY SACHLR+A C G+SI +AY G C +S K W G
Sbjct: 182 GVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLC 241
Query: 299 ---------------TDGVTYESACHLREAACRRGKSIPIAYRGHC 329
+D TY S C ++EAAC G + + + G C
Sbjct: 242 DELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 287
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 291 TFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKK-G 349
T+ G G DG TY + C L +A C+ + + Y+G CK+TC ++ C C + +
Sbjct: 97 TWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTN 156
Query: 350 YPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTC 409
C+ +CG+DG Y + C LRK C I + Y G C A +C
Sbjct: 157 NAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSC 216
Query: 410 ANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKAD 469
+IQC G+ CL D + G RC C CP +C S++ TY S C MK
Sbjct: 217 EDIQCTGGKKCLWDFKVGRGRCSLCD--ELCPDSKSD---EPVCASDNATYASECAMKEA 271
Query: 470 ECQQRIVIETKYSGPCHS 487
C +++E K+SG C+S
Sbjct: 272 ACSSGVLLEVKHSGSCNS 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 329 CKQTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 387
CK+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K
Sbjct: 62 CKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN--ITWKGPVCGLDGKTYRNECALLKA 119
Query: 388 ACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGP 447
C++ + V Y G C+ TC ++ C TC+ D N + C TC+ CP
Sbjct: 120 RCKEQPELEVQYQGRCKK--TCRDVFCPGSSTCVVDQTNNA-YCVTCNRI--CPEPASS- 173
Query: 448 LPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
LCG++ VTY S C ++ C I Y G C
Sbjct: 174 -EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 210
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 65 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITWK-GPVCGLDGKTYRNECALLKARCK 122
Query: 270 RGKSIPIAYRGHCKLTESSI----------------------------KTFWGVWSGTDG 301
+ + Y+G CK T + + G DG
Sbjct: 123 EQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDG 182
Query: 302 VTYESACHLREAACRRGKSIPIAYRGHC--KQTCENIDCGEGKKCA--IKKGYPKC-ICA 356
VTY SACHLR+A C G+SI +AY G C ++CE+I C GKKC K G +C +C
Sbjct: 183 VTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCD 242
Query: 357 PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
C PVC SD Y + C +++ AC ++ V + G+C
Sbjct: 243 ELCPDSKSD--EPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 288
>pdb|3B4V|C Chain C, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|D Chain D, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|G Chain G, X-Ray Structure Of Activin In Complex With Fstl3
pdb|3B4V|H Chain H, X-Ray Structure Of Activin In Complex With Fstl3
Length = 237
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 111/206 (53%), Gaps = 6/206 (2%)
Query: 2 GQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGVQCQPCKKTCE 61
GQ C+ +L V R ECC N + AWS PG G V C PCK +C+
Sbjct: 17 GQEATCSLVLQTDVTRAECCASGN-IDTAWSNL-THPGNKINLLGFLGLVHCLPCKDSCD 74
Query: 62 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR CR +
Sbjct: 75 GVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAARCRGHPD 132
Query: 122 ISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRC-IRHCVTPSSDTHQVCGTDGVT 180
+SV Y G C+ SC+ V CP + C++DQ HC C C PSS ++CG + VT
Sbjct: 133 LSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVT 191
Query: 181 YESACHLREAACRRGKSIPIAYRGHC 206
Y S+CH+R+A C G+SI + + G C
Sbjct: 192 YISSCHMRQATCFLGRSIGVRHAGSC 217
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
SCD V C GK C + P C C C + QVCG+DG TY C LR A CR
Sbjct: 72 SCDGVECGPGKACRMLGGR-PRC-ECAPDCSGLPARL-QVCGSDGATYRDECELRAARCR 128
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRC-IRHCVTPSSDTHQVCGT 252
+ + YRG C+ SC+ V CP + C++DQ HC C C PSS ++CG
Sbjct: 129 GHPDLSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGN 187
Query: 253 DGVTYESACHLREAACRRGKSIPIAYRGHCKLT 285
+ VTY S+CH+R+A C G+SI + + G C T
Sbjct: 188 NNVTYISSCHMRQATCFLGRSIGVRHAGSCAGT 220
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 329 CKQTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRA 388
CK +C+ ++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR
Sbjct: 69 CKDSCDGVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAAR 126
Query: 389 CRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPL 448
CR + +SV Y G C+ +C ++ C Q+C+ D + GS C C P CP P
Sbjct: 127 CRGHPDLSVMYRGRCRK--SCEHVVCPRPQSCVVD-QTGSAHCVVCRAAP-CPV----PS 178
Query: 449 PP--MLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
P LCG+N+VTY S C M+ C I +++G C
Sbjct: 179 SPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 217
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 205 HCKP--GSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACH 262
HC P SCD V C GK C + P C C C + QVCG+DG TY C
Sbjct: 65 HCLPCKDSCDGVECGPGKACRMLGGR-PRC-ECAPDCSGLPARL-QVCGSDGATYRDECE 121
Query: 263 LREAACRRGKSIPIAYRGHCKLT---------ESSIKTFWGV------------------ 295
LR A CR + + YRG C+ + +S + G
Sbjct: 122 LRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPG 181
Query: 296 --WSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKK 343
G + VTY S+CH+R+A C G+SI + + G C T E GE +
Sbjct: 182 QELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTPEEPPGGESAE 231
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKK-GYPKCIC- 355
G+DG TY C LR A CR + + YRG C+++CE++ C + C + + G C+
Sbjct: 110 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVC 169
Query: 356 -APDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
A C + +CG++ Y + C +R+ C I V + G+C
Sbjct: 170 RAAPCPVPSSPGQE-LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 217
>pdb|3SEK|C Chain C, Crystal Structure Of The Myostatin:follistatin-Like 3
Complex
Length = 209
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 111/206 (53%), Gaps = 6/206 (2%)
Query: 2 GQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGVQCQPCKKTCE 61
GQ C+ +L V R ECC N + AWS PG G V C PCK +C+
Sbjct: 8 GQEATCSLVLQTDVTRAECCASGN-IDTAWSNLT-HPGNKINLLGFLGLVHCLPCKDSCD 65
Query: 62 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR CR +
Sbjct: 66 GVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAARCRGHPD 123
Query: 122 ISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRC-IRHCVTPSSDTHQVCGTDGVT 180
+SV Y G C+ SC+ V CP + C++DQ HC C C PSS ++CG + VT
Sbjct: 124 LSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVT 182
Query: 181 YESACHLREAACRRGKSIPIAYRGHC 206
Y S+CH+R+A C G+SI + + G C
Sbjct: 183 YISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
SCD V C GK C + P C C C + QVCG+DG TY C LR A CR
Sbjct: 63 SCDGVECGPGKACRMLGGR-PRCE-CAPDCSGLPARL-QVCGSDGATYRDECELRAARCR 119
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRC-IRHCVTPSSDTHQVCGT 252
+ + YRG C+ SC+ V CP + C++DQ HC C C PSS ++CG
Sbjct: 120 GHPDLSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGN 178
Query: 253 DGVTYESACHLREAACRRGKSIPIAYRGHC 282
+ VTY S+CH+R+A C G+SI + + G C
Sbjct: 179 NNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 329 CKQTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRA 388
CK +C+ ++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR
Sbjct: 60 CKDSCDGVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAAR 117
Query: 389 CRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPL 448
CR + +SV Y G C+ +C ++ C Q+C+ D + GS C C P CP P
Sbjct: 118 CRGHPDLSVMYRGRCRK--SCEHVVCPRPQSCVVD-QTGSAHCVVCRAAP-CPV----PS 169
Query: 449 PP--MLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
P LCG+N+VTY S C M+ C I +++G C
Sbjct: 170 SPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 34/156 (21%)
Query: 205 HCKP--GSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACH 262
HC P SCD V C GK C + P C C C + QVCG+DG TY C
Sbjct: 56 HCLPCKDSCDGVECGPGKACRMLGGR-PRCE-CAPDCSGLPARL-QVCGSDGATYRDECE 112
Query: 263 LREAACRRGKSIPIAYRGHCKLT---------ESSIKTFWGV------------------ 295
LR A CR + + YRG C+ + +S + G
Sbjct: 113 LRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPG 172
Query: 296 --WSGTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G + VTY S+CH+R+A C G+SI + + G C
Sbjct: 173 QELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKK-GYPKCIC- 355
G+DG TY C LR A CR + + YRG C+++CE++ C + C + + G C+
Sbjct: 101 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVC 160
Query: 356 -APDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
A C + +CG++ Y + C +R+ C I V + G+C
Sbjct: 161 RAAPCPVPSSPGQE-LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
>pdb|2ARP|F Chain F, Activin A In Complex With Fs12 Fragment Of Follistatin
Length = 152
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 58 KTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 116
+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C
Sbjct: 4 ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARC 61
Query: 117 RKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGT 176
++ + V Y G C+ +C V CP C++DQ +C C R C PSS +CG
Sbjct: 62 KEQPELEVQYQGKCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGN 120
Query: 177 DGVTYESACHLREAACRRGKSIPIAYRGHC 206
DGVTY SACHLR+A C G+SI +AY G C
Sbjct: 121 DGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 5 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITWK-GPVCGLDGKTYRNECALLKARCK 62
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTD 253
+ + Y+G CK +C V CP C++DQ +C C R C PSS +CG D
Sbjct: 63 EQPELEVQYQGKCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGND 121
Query: 254 GVTYESACHLREAACRRGKSIPIAYRGHC 282
GVTY SACHLR+A C G+SI +AY G C
Sbjct: 122 GVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 331 QTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 389
+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C
Sbjct: 4 ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARC 61
Query: 390 RKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLP 449
++ + V Y G C+ TC ++ C TC+ D N + C TC+ CP
Sbjct: 62 KEQPELEVQYQGKCKK--TCRDVFCPGSSTCVVDQTNNA-YCVTCNR--ICPEPSSS--E 114
Query: 450 PMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
LCG++ VTY S C ++ C I Y G C
Sbjct: 115 QSLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 64/148 (43%), Gaps = 30/148 (20%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 5 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITWK-GPVCGLDGKTYRNECALLKARCK 62
Query: 270 RGKSIPIAYRGHCKLTESSI----------------------------KTFWGVWSGTDG 301
+ + Y+G CK T + + G DG
Sbjct: 63 EQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGNDG 122
Query: 302 VTYESACHLREAACRRGKSIPIAYRGHC 329
VTY SACHLR+A C G+SI +AY G C
Sbjct: 123 VTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 291 TFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKK-G 349
T+ G G DG TY + C L +A C+ + + Y+G CK+TC ++ C C + +
Sbjct: 37 TWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTN 96
Query: 350 YPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
C+ +CG+DG Y + C LRK C I + Y G C
Sbjct: 97 NAYCVTCNRICPEPSSSEQSLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 56 CKKTCENIDCGEGKKCAIKK-GYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 114
CKKTC ++ C C + + C+ +CG+DG Y + C LRK
Sbjct: 75 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGNDGVTYSSACHLRKA 134
Query: 115 ACRKNEVISVDYFGTC 130
C I + Y G C
Sbjct: 135 TCLLGRSIGLAYEGKC 150
>pdb|1LR7|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin, Complexed With The Heparin Analogue Sucrose
Octasulphate (Sos)
pdb|1LR8|A Chain A, Crystal Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin, Complexed With The Heparin Analogue D-Myo-
Inositol Hexasulphate (Ins6s)
pdb|1LR9|A Chain A, Structure Of Fs1, The Heparin-Binding Domain Of
Follistatin
Length = 74
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 331 QTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 389
+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C
Sbjct: 2 ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARC 59
Query: 390 RKNEVISVDYFGTCQ 404
++ + V Y G C+
Sbjct: 60 KEQPELEVQYQGKCK 74
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 58 KTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 116
+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C
Sbjct: 2 ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARC 59
Query: 117 RKNEVISVDYFGTCQ 131
++ + V Y G C+
Sbjct: 60 KEQPELEVQYQGKCK 74
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITW-KGPVCGLDGKTYRNECALLKARCK 60
Query: 194 RGKSIPIAYRGHCK 207
+ + Y+G CK
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+C+ V C GK C +++ P C C C + VCG DG TY + C L +A C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRC-VCAPDCSNITW-KGPVCGLDGKTYRNECALLKARCK 60
Query: 270 RGKSIPIAYRGHCK 283
+ + Y+G CK
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPH-RHQGPLPPMLCGSNHVTYPSWCEM 466
TC N+ C PG+ C + +N PRC C+ P C + +GP+ CG + TY + C +
Sbjct: 3 TCENVDCGPGKKCRMNKKN-KPRC-VCA--PDCSNITWKGPV----CGLDGKTYRNECAL 54
Query: 467 KADECQQRIVIETKYSGPCH 486
C+++ +E +Y G C
Sbjct: 55 LKARCKEQPELEVQYQGKCK 74
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 291 TFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 330
T+ G G DG TY + C L +A C+ + + Y+G CK
Sbjct: 35 TWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCK 74
>pdb|2KCX|A Chain A, Solution Nmr Structure Of Kazal-1 Domain Of Human
Follistatin-Related Protein 3 (Fstl-3). Northeast
Structural Genomics Target Hr6186a
Length = 74
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 331 QTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACR 390
+C+ ++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR CR
Sbjct: 2 DSCDGVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAARCR 59
Query: 391 KNEVISVDYFGTCQ 404
+ +SV Y G C+
Sbjct: 60 GHPDLSVMYRGRCR 73
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 59 TCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRK 118
+C+ ++CG GK C + G P+C CAPDC G R VCGSDG Y+ C LR CR
Sbjct: 3 SCDGVECGPGKACRMLGGRPRCECAPDCS--GLPARLQVCGSDGATYRDECELRAARCRG 60
Query: 119 NEVISVDYFGTCQ 131
+ +SV Y G C+
Sbjct: 61 HPDLSVMYRGRCR 73
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 132 TGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 191
+ SCD V C GK C + P C C C + QVCG+DG TY C LR A
Sbjct: 1 SDSCDGVECGPGKACRM-LGGRPRCE-CAPDCSGLPARL-QVCGSDGATYRDECELRAAR 57
Query: 192 CRRGKSIPIAYRGHCK 207
CR + + YRG C+
Sbjct: 58 CRGHPDLSVMYRGRCR 73
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
SCD V C GK C + P C C C + QVCG+DG TY C LR A CR
Sbjct: 3 SCDGVECGPGKACRM-LGGRPRCE-CAPDCSGLPARL-QVCGSDGATYRDECELRAARCR 59
Query: 270 RGKSIPIAYRGHCK 283
+ + YRG C+
Sbjct: 60 GHPDLSVMYRGRCR 73
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
+C ++C PG+ C + G PRC+ P R Q +CGS+ TY CE++
Sbjct: 3 SCDGVECGPGKACR--MLGGRPRCECAPDCSGLPARLQ------VCGSDGATYRDECELR 54
Query: 468 ADECQQRIVIETKYSGPCH 486
A C+ + Y G C
Sbjct: 55 AARCRGHPDLSVMYRGRCR 73
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQ 331
G+DG TY C LR A CR + + YRG C++
Sbjct: 41 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRK 74
>pdb|1YU6|C Chain C, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|D Chain D, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 185
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 167 SSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK---PGSCDR---VTCPSGK 220
+ D +CGTDGVT+ S C L G +I + G C+ P C R T GK
Sbjct: 23 TEDLRPICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTTSEEGK 81
Query: 221 FCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRG 280
IL CN+ + + VCGTDGVTY++ C L +G S+ + G
Sbjct: 82 VMIL-------CNKAL----------NPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDG 124
Query: 281 HCKLTESSIKTFWGVWS------------GTDGVTYESACHLREAACRRGKSIPIAYRGH 328
C+ +++ + G+D TY + C+ A ++ +++ G
Sbjct: 125 ECRKELAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGK 184
Query: 329 C 329
C
Sbjct: 185 C 185
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 51/227 (22%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC ++G +C D + P+CG+DG + + C L I
Sbjct: 3 VDCSRFPNTTNEEGKDVLVCTEDLR--------PICGTDGVTH-SECLLCAYNIEYGTNI 53
Query: 123 SVDYFGTCQTG---SCDR---VTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGT 176
S ++ G C+ C R T GK IL CN+ + + VCGT
Sbjct: 54 SKEHDGECREAVPMDCSRYPNTTSEEGKVMIL-------CNKAL----------NPVCGT 96
Query: 177 DGVTYESACHLREAACRRGKSIPIAYRGHC-KPGSCDRVTCPSGKFCILDQNLIPHCNRC 235
DGVTY++ C L +G S+ + G C K + V C + P C
Sbjct: 97 DGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDCS--------EYPKPACTLE 148
Query: 236 IRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
R +CG+D TY + C+ A ++ +++ G C
Sbjct: 149 YR----------PLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 35/170 (20%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAP 357
GTDGVT+ S C L G +I + G C++ +DC ++G +C
Sbjct: 31 GTDGVTH-SECLLCAYNIEYGTNISKEHDGECREAVP-MDCSRYPNTTSEEGKVMILC-- 86
Query: 358 DCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPG 417
NPVCG+DG Y C L + + + G C+ + ++ C
Sbjct: 87 ------NKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDCS-- 138
Query: 418 QTCLTDLRNGSPRCQTCSYP-PSCPHRHQGPLPPMLCGSNHVTYPSWCEM 466
YP P+C ++ LCGS++ TY + C
Sbjct: 139 -----------------EYPKPACTLEYR-----PLCGSDNKTYGNKCNF 166
>pdb|1NUB|A Chain A, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
pdb|1NUB|B Chain B, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
Length = 229
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 133 GSCDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 191
C C GK C LD+N P C + C P + +VC D T++S+CH
Sbjct: 4 APCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 63
Query: 192 C-----RRGKSIPIAYRGHCK 207
C ++G + + Y G CK
Sbjct: 64 CTLEGTKKGHKLHLDYIGPCK 84
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 209 GSCDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 267
C C GK C LD+N P C + C P + +VC D T++S+CH
Sbjct: 4 APCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 63
Query: 268 C-----RRGKSIPIAYRGHCK 283
C ++G + + Y G CK
Sbjct: 64 CTLEGTKKGHKLHLDYIGPCK 84
>pdb|2V53|A Chain A, Crystal Structure Of A Sparc-Collagen Complex
Length = 230
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 133 GSCDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 191
C C GK C LD+N P C + C P + +VC D T++S+CH
Sbjct: 5 NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 64
Query: 192 C-----RRGKSIPIAYRGHCK 207
C ++G + + Y G CK
Sbjct: 65 CTLEGTKKGHKLHLDYIGPCK 85
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 209 GSCDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 267
C C GK C LD+N P C + C P + +VC D T++S+CH
Sbjct: 5 NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 64
Query: 268 C-----RRGKSIPIAYRGHCK 283
C ++G + + Y G CK
Sbjct: 65 CTLEGTKKGHKLHLDYIGPCK 85
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 55 PCKKTCENIDCGEGKKCAI-KKGYPKCICA-PDCKQRGRHMRNPVCGSDGRNYKTVCRLR 112
P C+N C GK C + + P C+C P VC +D + + + C
Sbjct: 2 PLANPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFF 61
Query: 113 KRAC-----RKNEVISVDYFGTCQ 131
C +K + +DY G C+
Sbjct: 62 ATKCTLEGTKKGHKLHLDYIGPCK 85
>pdb|1BMO|A Chain A, Bm-40, FsEC DOMAIN PAIR
pdb|1BMO|B Chain B, Bm-40, FsEC DOMAIN PAIR
Length = 233
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 135 CDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAAC- 192
C C GK C LD+N P C + C P + +VC D T++S+CH C
Sbjct: 2 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 61
Query: 193 ----RRGKSIPIAYRGHCK 207
++G + + Y G CK
Sbjct: 62 LEGTKKGHKLHLDYIGPCK 80
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 211 CDRVTCPSGKFCILDQNLIPHCN-RCIRHCVTPSSDTHQVCGTDGVTYESACHLREAAC- 268
C C GK C LD+N P C + C P + +VC D T++S+CH C
Sbjct: 2 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 61
Query: 269 ----RRGKSIPIAYRGHCK 283
++G + + Y G CK
Sbjct: 62 LEGTKKGHKLHLDYIGPCK 80
>pdb|1TBR|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBR|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
Length = 103
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 171 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIP 230
H+VCG+DG TY + C L A + + G C+P D+++
Sbjct: 13 HRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDE--------------DEDVCQ 58
Query: 231 HCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 283
C+ + VCG+D +TY++ C L A+ + + + G C+
Sbjct: 59 ECD---------GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 247 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTESS------IKTFWGVWSGTD 300
H+VCG+DG TY + C L A + + G C+ E + G+D
Sbjct: 13 HRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGDEYKPVCGSD 72
Query: 301 GVTYESACHLREAACRRGKSIPIAYRGHCK 330
+TY++ C L A+ + + + G C+
Sbjct: 73 DITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 25/117 (21%)
Query: 92 HMRNPVCGSDGRNYKTVCRLR-KRACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQ 150
H + VCGSDG Y C L + K E++ V + G C+ D+
Sbjct: 10 HALHRVCGSDGETYSNPCTLNCAKFNGKPELVKV-HDGPCEPDE--------------DE 54
Query: 151 NLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 207
++ C+ + VCG+D +TY++ C L A+ + + + G C+
Sbjct: 55 DVCQECD---------GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 29/123 (23%)
Query: 365 HMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDL 424
H + VCGSDG Y C L C K F V + C+P +
Sbjct: 10 HALHRVCGSDGETYSNPCTLN---CAK--------FNGKPELVKVHDGPCEPDED----- 53
Query: 425 RNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGP 484
CQ C G +CGS+ +TY + C ++ +E K+ GP
Sbjct: 54 ---EDVCQEC----------DGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGP 100
Query: 485 CHS 487
C +
Sbjct: 101 CRT 103
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 70 KCAIKKGYPKCI------CAPD-----CKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRK 118
CA G P+ + C PD C++ PVCGSD Y CRL +
Sbjct: 30 NCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGDEYKPVCGSDDITYDNNCRLECASISS 89
Query: 119 NEVISVDYFGTCQT 132
+ + + + G C+T
Sbjct: 90 SPGVELKHEGPCRT 103
>pdb|1Y1B|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor
Length = 48
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCG+DG+TY +AC L A+CR I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCG+DG+TY +AC L A+CR I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 84 PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
PDC +PVCGSDG Y C L +CR + I + + G C
Sbjct: 2 PDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 357 PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
PDC +PVCGSDG Y C L +CR + I + + G C
Sbjct: 2 PDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+DG+TY +AC L A+CR I + ++G C
Sbjct: 17 GSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
>pdb|3TJQ|A Chain A, N-Domain Of Htra1
Length = 140
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 65 CGEGKKCAIKKGYPKCICAPDCKQRGR---HMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
CGEG +C + G P Q G PVCGSD Y +C+LR A R++E
Sbjct: 65 CGEGLQCVVPFGVPASATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRA-ASRRSER 123
Query: 122 ISVDYFGTCQTGSC 135
+ Q G+C
Sbjct: 124 LHRPPVIVLQRGAC 137
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 338 CGEGKKCAIKKGYPKCICAPDCKQRGR---HMRNPVCGSDGRNYKTVCRLRKRACRKNEV 394
CGEG +C + G P Q G PVCGSD Y +C+LR A R++E
Sbjct: 65 CGEGLQCVVPFGVPASATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRA-ASRRSER 123
Query: 395 I 395
+
Sbjct: 124 L 124
>pdb|1PCE|A Chain A, Solution Structure And Dynamics Of Pec-60, A Protein Of
The Kazal Type Inhibitor Family, Determined By Nuclear
Magnetic Resonance Spectroscopy
Length = 60
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCGTDGVTYES C L A + I I G C
Sbjct: 27 VCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCGTDGVTYES C L A + I I G C
Sbjct: 27 VCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
GTDGVTYES C L A + I I G C
Sbjct: 29 GTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Query: 83 APDCKQRGRHMRNPVCGSDGRNYKTVCRL 111
+PDC + + +PVCG+DG Y++ C+L
Sbjct: 17 SPDCSR----IYDPVCGTDGVTYESECKL 41
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Query: 356 APDCKQRGRHMRNPVCGSDGRNYKTVCRL 384
+PDC + + +PVCG+DG Y++ C+L
Sbjct: 17 SPDCSR----IYDPVCGTDGVTYESECKL 41
>pdb|1Y1C|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor Analogue
Length = 48
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCG+DG+TY +AC L A+ R I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCG+DG+TY +AC L A+ R I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+DG+TY +AC L A+ R I + ++G C
Sbjct: 17 GSDGITYGNACMLLCASARSDTPIELVHKGRC 48
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
+PVCGSDG Y C L + R + I + + G C
Sbjct: 13 DPVCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
+PVCGSDG Y C L + R + I + + G C
Sbjct: 13 DPVCGSDGITYGNACMLLCASARSDTPIELVHKGRC 48
>pdb|1OVO|A Chain A, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|B Chain B, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|C Chain C, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|1OVO|D Chain D, Crystallographic Refinement Of Japanese Quail Ovomucoid, A
Kazal-Type Inhibitor, And Model Building Studies Of
Complexes With Serine Proteases
pdb|3OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
Modified Ovomucoid Inhibitor Third Domains From Silver
Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
(Omjpq3(Asterisk))
Length = 56
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK C D + PVCGSD + Y C N +
Sbjct: 6 VDCSE---------YPKPACPKDYR--------PVCGSDNKTYSNKCNFCNAVVESNGTL 48
Query: 123 SVDYFGTC 130
++++FG C
Sbjct: 49 TLNHFGKC 56
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK C D + PVCGSD + Y C N +
Sbjct: 6 VDCSE---------YPKPACPKDYR--------PVCGSDNKTYSNKCNFCNAVVESNGTL 48
Query: 396 SVDYFGTC 403
++++FG C
Sbjct: 49 TLNHFGKC 56
>pdb|2SGP|I Chain I, Pro 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
Length = 51
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK C P+ + P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACTPEYR--------PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK C P+ + P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACTPEYR--------PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|3SGQ|I Chain I, Gln 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C Q R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTQEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C Q R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTQEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1Z7K|B Chain B, Crystal Structure Of Trypsin- Ovomucoid Turkey Egg White
Inhibitor Complex
Length = 62
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCGTDGVTY++ C L +G S+ + G C
Sbjct: 29 VCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGEC 62
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCGTDGVTY++ C L +G S+ + G C
Sbjct: 29 VCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGEC 62
>pdb|1SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|2SGE|I Chain I, Glu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTEEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTEEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2NU1|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
Aromatic P1 Variants Trp18i, His18i, Phe18i And Tyr18i
Length = 51
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK C H P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACT--------HEYRPLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK C H P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACT--------HEYRPLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2OVO|A Chain A, The Crystal And Molecular Structure Of The Third Domain Of
Silver Pheasant Ovomucoid (Omsvp3)
Length = 56
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 62 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
++DC E YPK P C R P+CGSD + Y C N
Sbjct: 5 SVDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGT 47
Query: 122 ISVDYFGTC 130
+++ +FG C
Sbjct: 48 LTLSHFGKC 56
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 335 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 394
++DC E YPK P C R P+CGSD + Y C N
Sbjct: 5 SVDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGT 47
Query: 395 ISVDYFGTC 403
+++ +FG C
Sbjct: 48 LTLSHFGKC 56
>pdb|1IY6|A Chain A, Solution Structure Of Omsvp3 Variant, P14cN39C
Length = 54
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 17/69 (24%)
Query: 62 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
++DC E YPKC C + + P+CGSD + Y C N
Sbjct: 3 SVDCSE---------YPKCACTMEYR--------PLCGSDNKTYGNKCNFCCAVVESNGT 45
Query: 122 ISVDYFGTC 130
+++ +FG C
Sbjct: 46 LTLSHFGKC 54
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 17/69 (24%)
Query: 335 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 394
++DC E YPKC C + + P+CGSD + Y C N
Sbjct: 3 SVDCSE---------YPKCACTMEYR--------PLCGSDNKTYGNKCNFCCAVVESNGT 45
Query: 395 ISVDYFGTC 403
+++ +FG C
Sbjct: 46 LTLSHFGKC 54
>pdb|4OVO|A Chain A, Refined X-Ray Crystal Structures Of The Reactive Site
Modified Ovomucoid Inhibitor Third Domains From Silver
Pheasant (Omsvp3(Asterisk)) And From Japanese Quail
(Omjpq3(Asterisk))
Length = 56
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 6 VDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 48
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 49 TLSHFGKC 56
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 6 VDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 48
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 49 TLSHFGKC 56
>pdb|1IY5|A Chain A, Solution Structure Of Wild Type Omsvp3
Length = 54
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 4 VDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 46
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 47 TLSHFGKC 54
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 4 VDCSE---------YPK----PACTMEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 46
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 47 TLSHFGKC 54
>pdb|1DS3|I Chain I, Crystal Structure Of Omtky3-Ch2-Asp19i
Length = 51
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK C D + P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACTXDYR--------PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK C D + P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPKPACTXDYR--------PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2GKT|I Chain I, Crystal Structure Of The P14'-Ala32 Variant Of The N-
Terminally Truncated Omtky3-Del(1-5)
pdb|2GKV|A Chain A, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
Complex
pdb|2GKV|B Chain B, Crystal Structure Of The Sgpb:p14'-Ala32 Omtky3-Del(1-5)
Complex
Length = 51
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTLEYR----PLCGSDNKTYANKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTLEYR----PLCGSDNKTYANKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1HJA|I Chain I, Lys 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Alpha-Chymotrypsin
pdb|2NU3|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
pdb|2NU4|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
Length = 51
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTKEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTKEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1SGN|I Chain I, Asn 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTNEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTNEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1CT0|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ser18i
In Complex With Sgpb
Length = 51
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTSEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTSEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1CHO|I Chain I, Crystal And Molecular Structures Of The Complex Of Alpha-
Chymotrypsin With Its Inhibitor Turkey Ovomucoid Third
Domain At 1.8 Angstroms Resolution
pdb|3SGB|I Chain I, Structure Of The Complex Of Streptomyces Griseus Protease
B And The Third Domain Of The Turkey Ovomucoid Inhibitor
At 1.8 Angstroms Resolution
pdb|1PPF|I Chain I, X-Ray Crystal Structure Of The Complex Of Human Leukocyte
Elastase (Pmn Elastase) And The Third Domain Of The
Turkey Ovomucoid Inhibitor
pdb|1OMT|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
(Standard Noesy Analysis)
pdb|1OMU|A Chain A, Solution Structure Of Ovomucoid (Third Domain) From
Domestic Turkey (298k, Ph 4.1) (Nmr, 50 Structures)
(Refined Model Using Network Editing Analysis)
pdb|1TUR|A Chain A, Solution Structure Of Turkey Ovomucoid Third Domain As
Determined From Nuclear Magnetic Resonance Data
pdb|1TUS|A Chain A, Solution Structure Of Reactive-Site Hydrolyzed Turkey
Ovomucoid Third Domain By Nuclear Magnetic Resonance And
Distance Geometry Methods
Length = 56
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 62 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 121
++DC E YPK P C R P+CGSD + Y C N
Sbjct: 5 SVDCSE---------YPK----PACTLEYR----PLCGSDNKTYGNKCNFCNAVVESNGT 47
Query: 122 ISVDYFGTC 130
+++ +FG C
Sbjct: 48 LTLSHFGKC 56
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 335 NIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEV 394
++DC E YPK P C R P+CGSD + Y C N
Sbjct: 5 SVDCSE---------YPK----PACTLEYR----PLCGSDNKTYGNKCNFCNAVVESNGT 47
Query: 395 ISVDYFGTC 403
+++ +FG C
Sbjct: 48 LTLSHFGKC 56
>pdb|1SGP|I Chain I, Ala 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTAEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTAEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1CT2|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Thr18i
In Complex With Sgpb
Length = 51
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTTEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTTEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
pdb|2SGD|I Chain I, Asp 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
10.7
Length = 51
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTDEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTDEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2NU2|I Chain I, Accommodation Of Positively-Charged Residues In A
Hydrophobic Specificity Pocket: Crystal Structures Of
Sgpb In Complex With Omtky3 Variants Lys18i And Arg18i
Length = 51
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTREYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C + R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTREYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2NU0|I Chain I, Molecular Structures Of The Complexes Of Sgpb With Omtky3
Aromatic P1 Variants Trp18i, His18i, Phe18i, And Tyr18i
Length = 51
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTWEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTWEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1SGR|I Chain I, Leu 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
pdb|1R0R|I Chain I, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|2GKR|I Chain I, Crystal Structure Of The N-Terminally Truncated Omtky3-
Del(1-5)
Length = 51
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTLEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTLEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1DS2|I Chain I, Crystal Structure Of Sgpb:omtky3-Coo-Leu18i
Length = 51
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTXEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTXEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1SGY|I Chain I, Tyr 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B At Ph
6.5
Length = 51
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTYEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTYEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1CT4|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Val18i
In Complex With Sgpb
Length = 51
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTVEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTVEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2SGF|I Chain I, Phe 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTFEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTFEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1SGQ|I Chain I, Gly 18 Variant Of Turkey Ovomucoid Inhibitor Third Domain
Complexed With Streptomyces Griseus Proteinase B
Length = 51
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTGEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTGEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|2XRC|A Chain A, Human Complement Factor I
pdb|2XRC|B Chain B, Human Complement Factor I
pdb|2XRC|C Chain C, Human Complement Factor I
pdb|2XRC|D Chain D, Human Complement Factor I
Length = 565
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
Query: 407 VTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEM 466
++C + CQP Q C+ C C P CP +C +N ++P++C+
Sbjct: 23 LSCDKVFCQPWQRCI------EGTC-VCKLPYQCPKNGTA-----VCATNRRSFPTYCQQ 70
Query: 467 KADEC 471
K+ EC
Sbjct: 71 KSLEC 75
>pdb|1CSO|I Chain I, Crystal Structure Of The Omtky3 P1 Variant Omtky3-Ile18i
In Complex With Sgpb
Length = 51
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTIEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 123 SVDYFGTC 130
++ +FG C
Sbjct: 44 TLSHFGKC 51
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC E YPK P C R P+CGSD + Y C N +
Sbjct: 1 VDCSE---------YPK----PACTIEYR----PLCGSDNKTYGNKCNFCNAVVESNGTL 43
Query: 396 SVDYFGTC 403
++ +FG C
Sbjct: 44 TLSHFGKC 51
>pdb|1M8B|A Chain A, Solution Structure Of The C State Of Turkey Ovomucoid At
Ph 2.5
pdb|1M8C|A Chain A, Solution Structure Of The T State Of Turkey Ovomucoid At
Ph 2.5
Length = 56
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 96 PVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
P+CGSD + Y C N +++ +FG C
Sbjct: 22 PLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 369 PVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
P+CGSD + Y C N +++ +FG C
Sbjct: 22 PLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 56
>pdb|2F3C|I Chain I, Crystal Structure Of Infestin 1, A Kazal-Type
Serineprotease Inhibitor, In Complex With Trypsin
Length = 55
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 171 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCD 212
H+VCG+DG TY + C L A + + G C P D
Sbjct: 13 HRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDPNDHD 54
>pdb|2KMO|A Chain A, Solution Structure Of Native Leech-Derived Tryptase
Inhibitor, Ldti
pdb|2KMP|A Chain A, Solution Structure Of Intermeidate Iia Of Leeck-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMQ|A Chain A, Solution Structure Of Intermediate Iib Of Leech-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMR|A Chain A, Solution Structure Of Intermediate Iic Of Leech-Derived
Tryptase Inhibitor, Ldti
Length = 44
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 92 HMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTG 133
+ PVCGSDGR Y C R +S+ G+C TG
Sbjct: 8 KILKPVCGSDGRTYANSCIARCNG------VSIKSEGSCPTG 43
>pdb|2ERW|A Chain A, Crystal Structure Of Infestin 4, A Factor Xiia Inhibitor
Length = 56
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTESSIKTF 292
VCG+DG TY + C L AA + + + + G C+ S+++ F
Sbjct: 15 VCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQ--RSNVEQF 56
>pdb|1LDT|L Chain L, Complex Of Leech-Derived Tryptase Inhibitor With Porcine
Trypsin
pdb|1AN1|I Chain I, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX
Length = 46
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 92 HMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTG 133
+ PVCGSDGR Y C R +S+ G+C TG
Sbjct: 8 KILKPVCGSDGRTYANSCIARCNG------VSIKSEGSCPTG 43
>pdb|1TGS|I Chain I, Three-Dimensional Structure Of The Complex Between
Pancreatic Secretory Inhibitor (Kazal Type) And
Trypsinogen At 1.8 Angstroms Resolution. Structure
Solution, Crystallographic Refinement And Preliminary
Structural Interpretation
Length = 56
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 171 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
+ VCGTDG+TY + C L +R + I G C
Sbjct: 21 NPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 247 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
+ VCGTDG+TY + C L +R + I G C
Sbjct: 21 NPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,785,700
Number of Sequences: 62578
Number of extensions: 748022
Number of successful extensions: 2124
Number of sequences better than 100.0: 80
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1642
Number of HSP's gapped (non-prelim): 369
length of query: 498
length of database: 14,973,337
effective HSP length: 103
effective length of query: 395
effective length of database: 8,527,803
effective search space: 3368482185
effective search space used: 3368482185
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)