RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1764
(498 letters)
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot
motif, TGF- fold, disulfide linked dimer, CLE PAIR of
basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens}
PDB: 2b0u_C* 2p6a_D
Length = 288
Score = 139 bits (350), Expect = 7e-38
Identities = 113/285 (39%), Positives = 155/285 (54%), Gaps = 7/285 (2%)
Query: 1 MGQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVL-GGGVQCQPCKKT 59
++GRC L ++ +EECC L +W++ED+ T+F W + GG C PCK+T
Sbjct: 7 QAKNGRCQVLYKTELSKEECCS-TGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKET 65
Query: 60 CENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRK 118
CEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C++
Sbjct: 66 CENVDCGPGKKCRMNKKNKPRCVCAPDCSNITW--KGPVCGLDGKTYRNECALLKARCKE 123
Query: 119 NEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDG 178
+ V Y G C+ +C V CP C++DQ +C C R C P+S +CG DG
Sbjct: 124 QPELEVQYQGRCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDG 182
Query: 179 VTYESACHLREAACRRGKSIPIAYRGHCKP-GSCDRVTCPSGKFCILDQNLIPHCNRCIR 237
VTY SACHLR+A C G+SI +AY G C SC+ + C GK C+ D +
Sbjct: 183 VTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCD 242
Query: 238 HCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
S VC +D TY S C ++EAAC G + + + G C
Sbjct: 243 ELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 287
Score = 107 bits (266), Expect = 4e-26
Identities = 75/327 (22%), Positives = 114/327 (34%), Gaps = 56/327 (17%)
Query: 163 CVTPSSDTHQVCGTDGVTYESACHLREAACR-RGKSIPIAYRGHCKPG--SCDRVTCPSG 219
+ + + + C + G S I +C P +C+ V C G
Sbjct: 15 VLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPG 74
Query: 220 KFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYR 279
K C +++ P C C C + + VCG DG TY + C L +A C+ + + Y+
Sbjct: 75 KKCRMNKKNKPRC-VCAPDC-SNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQ 132
Query: 280 GHCKLTESSIKTFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCG 339
G CK T + D
Sbjct: 133 GRCKKTCRDVFCPGSSTCVVD--------------------------------------- 153
Query: 340 EGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDY 399
+ C+ +CG+DG Y + C LRK C I + Y
Sbjct: 154 -------QTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAY 206
Query: 400 FGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVT 459
G C A +C +IQC G+ CL D + G RC C + +C S++ T
Sbjct: 207 EGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDE-----PVCASDNAT 261
Query: 460 YPSWCEMKADECQQRIVIETKYSGPCH 486
Y S C MK C +++E K+SG C+
Sbjct: 262 YASECAMKEAACSSGVLLEVKHSGSCN 288
Score = 73.5 bits (179), Expect = 1e-14
Identities = 63/196 (32%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGH----CKQTCENIDCGEGKKCAI-KKGYPK 352
+ G S K + CK+TCEN+DCG GKKC + KK P+
Sbjct: 27 CSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPR 86
Query: 353 CICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANI 412
C+CAPDC + PVCG DG+ Y+ C L K C++ + V Y G C+ TC ++
Sbjct: 87 CVCAPDCSNITW--KGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKK--TCRDV 142
Query: 413 QCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQ 472
C TC+ D + + C TC+ P + L CG++ VTY S C ++ C
Sbjct: 143 FCPGSSTCVVD-QTNNAYCVTCNRICPEPASSEQYL----CGNDGVTYSSACHLRKATCL 197
Query: 473 QRIVIETKYSGPCHSQ 488
I Y G C
Sbjct: 198 LGRSIGLAYEGKCIKA 213
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain,
cystine knot motif, TGF- fold, disulfide linked dimer,
follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens}
PDB: 2kcx_A
Length = 209
Score = 124 bits (312), Expect = 2e-33
Identities = 83/207 (40%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 1 MGQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGVQCQPCKKTC 60
GQ C+ +L V R ECC + + AWS PG G V C PCK +C
Sbjct: 7 QGQEATCSLVLQTDVTRAECCA-SGNIDTAWSNLTH-PGNKINLLGFLGLVHCLPCKDSC 64
Query: 61 ENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNE 120
+ ++CG GK C + G P+C CAPDC R VCGSDG Y+ C LR CR +
Sbjct: 65 DGVECGPGKACRMLGGRPRCECAPDCSGLPA--RLQVCGSDGATYRDECELRAARCRGHP 122
Query: 121 VISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRH-CVTPSSDTHQVCGTDGV 179
+SV Y G C+ SC+ V CP + C++DQ HC C C PSS ++CG + V
Sbjct: 123 DLSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNV 181
Query: 180 TYESACHLREAACRRGKSIPIAYRGHC 206
TY S+CH+R+A C G+SI + + G C
Sbjct: 182 TYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 89.2 bits (220), Expect = 1e-20
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
SCD V C GK C + P C C C + QVCG+DG TY C LR A CR
Sbjct: 63 SCDGVECGPGKACRMLGGR-PRC-ECAPDC-SGLPARLQVCGSDGATYRDECELRAARCR 119
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRH-CVTPSSDTHQVCGT 252
+ + YRG C+ SC+ V CP + C++DQ HC C C PSS ++CG
Sbjct: 120 GHPDLSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGN 178
Query: 253 DGVTYESACHLREAACRRGKSIPIAYRGHC 282
+ VTY S+CH+R+A C G+SI + + G C
Sbjct: 179 NNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 85.4 bits (210), Expect = 3e-19
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 301 GVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAPDCK 360
T S + + + CK +C+ ++CG GK C + G P+C CAPDC
Sbjct: 32 IDTAWSNLTHPGNKINLLGFLGLVHCLPCKDSCDGVECGPGKACRMLGGRPRCECAPDCS 91
Query: 361 QRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPGQTC 420
R VCGSDG Y+ C LR CR + +SV Y G C+ +C ++ C Q+C
Sbjct: 92 GLPA--RLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCR--KSCEHVVCPRPQSC 147
Query: 421 LTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETK 480
+ D + + P P L CG+N+VTY S C M+ C I +
Sbjct: 148 VVDQTGSAHCVVCRAAPCPVPSSPGQEL----CGNNNVTYISSCHMRQATCFLGRSIGVR 203
Query: 481 YSGPC 485
++G C
Sbjct: 204 HAGSC 208
Score = 64.6 bits (156), Expect = 4e-12
Identities = 45/149 (30%), Positives = 60/149 (40%), Gaps = 32/149 (21%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
SCD V C GK C + P C C C + QVCG+DG TY C LR A CR
Sbjct: 63 SCDGVECGPGKACRMLGGR-PRC-ECAPDC-SGLPARLQVCGSDGATYRDECELRAARCR 119
Query: 270 RGKSIPIAYRGHCKLTESSIKTFWGVW-----------------------------SGTD 300
+ + YRG C+ + + G +
Sbjct: 120 GHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNN 179
Query: 301 GVTYESACHLREAACRRGKSIPIAYRGHC 329
VTY S+CH+R+A C G+SI + + G C
Sbjct: 180 NVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 63.8 bits (154), Expect = 8e-12
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAI--KKGYPKCIC 355
G+DG TY C LR A CR + + YRG C+++CE++ C + C + +C
Sbjct: 101 GSDGATYRDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVC 160
Query: 356 APDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
+CG++ Y + C +R+ C I V + G+C
Sbjct: 161 RAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 208
Score = 38.0 bits (87), Expect = 0.004
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
+C ++C PG+ C G PRC+ P R Q +CGS+ TY CE++
Sbjct: 63 SCDGVECGPGKACRML--GGRPRCECAPDCSGLPARLQ------VCGSDGATYRDECELR 114
Query: 468 ADECQQRIVIETKYSGPCHSQELFLFEETWR 498
A C+ + Y G C + +
Sbjct: 115 AARCRGHPDLSVMYRGRCRKSCEHVVCPRPQ 145
>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage
on PAIR of BAS residues, glycoprotein, growth factor,
hormone, secreted; HET: NAG; 2.48A {Homo sapiens}
Length = 237
Score = 114 bits (286), Expect = 2e-29
Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
Query: 1 MGQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPGTMFFWRVLGGGVQCQPCKKTC 60
GQ C+ +L V R ECC + + AWS PG G V C PCK +C
Sbjct: 16 QGQEATCSLVLQTDVTRAECCA-SGNIDTAWSNLTH-PGNKINLLGFLGLVHCLPCKDSC 73
Query: 61 ENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNE 120
+ ++CG GK C + G P+C CAPDC R VCGSDG Y+ C LR CR +
Sbjct: 74 DGVECGPGKACRMLGGRPRCECAPDCSGLPA--RLQVCGSDGATYRDECELRAARCRGHP 131
Query: 121 VISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVT-PSSDTHQVCGTDGV 179
+SV Y G C+ SC+ V CP + C++DQ HC C PSS ++CG + V
Sbjct: 132 DLSVMYRGRCRK-SCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNV 190
Query: 180 TYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLI 229
TY S+CH+R+A C G+SI + + G C P G+ ++N +
Sbjct: 191 TYISSCHMRQATCFLGRSIGVRHAGSCAGTPE---EPPGGESAEEEENFV 237
Score = 104 bits (260), Expect = 8e-26
Identities = 65/198 (32%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
Query: 93 MRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ-TGSCDRVTCPSGKFCILDQN 151
+ C + G L + N + + SCD V C GK C +
Sbjct: 30 VTRAECCASGNIDTAWSNLTHPGNKINLLGFLGLVHCLPCKDSCDGVECGPGKACRMLGG 89
Query: 152 LIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSC 211
P C C C + QVCG+DG TY C LR A CR + + YRG C+ SC
Sbjct: 90 R-PRC-ECAPDC-SGLPARLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCRK-SC 145
Query: 212 DRVTCPSGKFCILDQNLIPHCNRCIRHCVT-PSSDTHQVCGTDGVTYESACHLREAACRR 270
+ V CP + C++DQ HC C PSS ++CG + VTY S+CH+R+A C
Sbjct: 146 EHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFL 205
Query: 271 GKSIPIAYRGHCKLTESS 288
G+SI + + G C T
Sbjct: 206 GRSIGVRHAGSCAGTPEE 223
Score = 95.4 bits (236), Expect = 2e-22
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 298 GTDGVTYESACHLREAACRRGK--SIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCIC 355
G + +L + + + + CK +C+ ++CG GK C + G P+C C
Sbjct: 36 CASGNIDTAWSNLTHPGNKINLLGFLGLVHCLPCKDSCDGVECGPGKACRMLGGRPRCEC 95
Query: 356 APDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQ 415
APDC R VCGSDG Y+ C LR CR + +SV Y G C+ +C ++ C
Sbjct: 96 APDCSGLPA--RLQVCGSDGATYRDECELRAARCRGHPDLSVMYRGRCR--KSCEHVVCP 151
Query: 416 PGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRI 475
Q+C+ D + + P P LCG+N+VTY S C M+ C
Sbjct: 152 RPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQE----LCGNNNVTYISSCHMRQATCFLGR 207
Query: 476 VIETKYSGPCHS 487
I +++G C
Sbjct: 208 SIGVRHAGSCAG 219
Score = 78.0 bits (191), Expect = 2e-16
Identities = 56/267 (20%), Positives = 83/267 (31%), Gaps = 56/267 (20%)
Query: 140 CPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGK--S 197
G C L Q C+ V + T C G + +L +
Sbjct: 6 PAPGGVCWLQQGQEATCS-----LVLQTDVTRAECCASGNIDTAWSNLTHPGNKINLLGF 60
Query: 198 IPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTY 257
+ + + CK SCD V C GK C + P C C C + QVCG+DG TY
Sbjct: 61 LGLVHCLPCK-DSCDGVECGPGKACRMLGGR-PRC-ECAPDC-SGLPARLQVCGSDGATY 116
Query: 258 ESACHLREAACRRGKSIPIAYRGHCKLTESSIKTFWGVWSGTDGVTYESACHLREAACRR 317
C LR A CR + + YRG C+ + +
Sbjct: 117 RDECELRAARCRGHPDLSVMYRGRCRKSCEHVVCPRP----------------------- 153
Query: 318 GKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRN 377
Q+C G + +P +CG++
Sbjct: 154 -------------QSCVVDQTGSAHCVVCRAAPCPVPSSPGQ---------ELCGNNNVT 191
Query: 378 YKTVCRLRKRACRKNEVISVDYFGTCQ 404
Y + C +R+ C I V + G+C
Sbjct: 192 YISSCHMRQATCFLGRSIGVRHAGSCA 218
Score = 57.2 bits (137), Expect = 2e-09
Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 366 MRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLR 425
+ C + G L + N + + +C ++C PG+ C
Sbjct: 30 VTRAECCASGNIDTAWSNLTHPGNKINLLGFLGLVHCLPCKDSCDGVECGPGKACRML-- 87
Query: 426 NGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
G PRC+ P R Q +CGS+ TY CE++A C+ + Y G C
Sbjct: 88 GGRPRCECAPDCSGLPARLQ------VCGSDGATYRDECELRAARCRGHPDLSVMYRGRC 141
Query: 486 HSQELFLFEETWR 498
+ +
Sbjct: 142 RKSCEHVVCPRPQ 154
>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal
domain, PROT complex, hormone-growth factor complex;
HET: 1PG; 2.00A {Rattus norvegicus}
Length = 152
Score = 99.6 bits (247), Expect = 7e-25
Identities = 61/150 (40%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
+C+ V C GK C +++ P C C C + + VCG DG TY + C L +A C+
Sbjct: 5 TCENVDCGPGKKCRMNKKNKPRCV-CAPDC-SNITWKGPVCGLDGKTYRNECALLKARCK 62
Query: 194 RGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTD 253
+ + Y+G CK +C V CP C++DQ +C C R C PSS +CG D
Sbjct: 63 EQPELEVQYQGKCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGND 121
Query: 254 GVTYESACHLREAACRRGKSIPIAYRGHCK 283
GVTY SACHLR+A C G+SI +AY G C
Sbjct: 122 GVTYSSACHLRKATCLLGRSIGLAYEGKCI 151
Score = 93.8 bits (232), Expect = 8e-23
Identities = 71/153 (46%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Query: 56 CKKTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 114
+TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K
Sbjct: 2 SMETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKA 59
Query: 115 ACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVC 174
C++ + V Y G C+ +C V CP C++DQ +C C R C PSS +C
Sbjct: 60 RCKEQPELEVQYQGKCKK-TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLC 118
Query: 175 GTDGVTYESACHLREAACRRGKSIPIAYRGHCK 207
G DGVTY SACHLR+A C G+SI +AY G C
Sbjct: 119 GNDGVTYSSACHLRKATCLLGRSIGLAYEGKCI 151
Score = 74.2 bits (181), Expect = 6e-16
Identities = 57/160 (35%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 327 GHCKQTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLR 385
G + TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L
Sbjct: 1 GSME-TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALL 57
Query: 386 KRACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQ 445
K C++ + V Y G C+ TC ++ C TC+ D N + P
Sbjct: 58 KARCKEQPELEVQYQGKCKK--TCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSE- 114
Query: 446 GPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
LCG++ VTY S C ++ C I Y G C
Sbjct: 115 ----QSLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 68.0 bits (165), Expect = 9e-14
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAI-KKGYPKCICA 356
G DG TY + C L +A C+ + + Y+G CK+TC ++ C C + + C+
Sbjct: 44 GLDGKTYRNECALLKARCKEQPELEVQYQGKCKKTCRDVFCPGSSTCVVDQTNNAYCVTC 103
Query: 357 PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
+CG+DG Y + C LRK C I + Y G C
Sbjct: 104 NRICPEPSSSEQSLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 150
Score = 42.6 bits (99), Expect = 5e-05
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 55 PCKKTCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRK 113
CKKTC ++ C C + + C+ +CG+DG Y + C LRK
Sbjct: 74 KCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPSSSEQSLCGNDGVTYSSACHLRK 133
Query: 114 RACRKNEVISVDYFGTC 130
C I + Y G C
Sbjct: 134 ATCLLGRSIGLAYEGKC 150
Score = 36.8 bits (84), Expect = 0.005
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
TC N+ C PG+ C + + PRC + + +CG + TY + C +
Sbjct: 5 TCENVDCGPGKKCRMN-KKNKPRCVCAPDCSNITWKGP------VCGLDGKTYRNECALL 57
Query: 468 ADECQQRIVIETKYSGPCHSQELFLFEETWR 498
C+++ +E +Y G C +F
Sbjct: 58 KARCKEQPELEVQYQGKCKKTCRDVFCPGSS 88
>1yu6_C Ovomucoid; protein proteinase inhibitor, protease, hydrolase; 1.55A
{Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1z7k_B*
Length = 185
Score = 78.1 bits (191), Expect = 6e-17
Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 37/220 (16%)
Query: 63 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 122
+DC ++G +C D P+CG+DG + + C L I
Sbjct: 3 VDCSRFPNTTNEEGKDVLVCTEDL--------RPICGTDGVTH-SECLLCAYNIEYGTNI 53
Query: 123 SVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYE 182
S ++ C N + + C + + VCGTDGVTY+
Sbjct: 54 SKEH--------DGECREAVPMDCSRYPNTTSEEGKVMILC---NKALNPVCGTDGVTYD 102
Query: 183 SACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTP 242
+ C L +G S+ + G C+ +
Sbjct: 103 NECVLCAHNLEQGTSVGKKHDGECRKELAA-----------------VSVDCSEYPKPAC 145
Query: 243 SSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
+ + +CG+D TY + C+ A ++ +++ G C
Sbjct: 146 TLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 61.2 bits (147), Expect = 4e-11
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 34/173 (19%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTESSIKTFWGVWS----------- 297
+CGTDGVT+ S C L G +I + G C+ + + +
Sbjct: 29 ICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREAVPMDCSRYPNTTSEEGKVMILCN 87
Query: 298 -------GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGY 350
GTDGVTY++ C L +G S+ + G C++
Sbjct: 88 KALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELA---------------A 132
Query: 351 PKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
C+ K P+CGSD + Y C N +++ +FG C
Sbjct: 133 VSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 60.0 bits (144), Expect = 1e-10
Identities = 42/188 (22%), Positives = 64/188 (34%), Gaps = 33/188 (17%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAP 357
GTDGVT+ S C L G +I + G C + +DC ++G +C
Sbjct: 31 GTDGVTH-SECLLCAYNIEYGTNISKEHDGEC-REAVPMDCSRYPNTTSEEGKVMILCNK 88
Query: 358 DCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPG 417
NPVCG+DG Y C L + + + G C+ + ++ C
Sbjct: 89 AL--------NPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDGECRKELAAVSVDC--- 137
Query: 418 QTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVI 477
T Y P LCGS++ TY + C + +
Sbjct: 138 -------SEYPKPACTLEYRP-------------LCGSDNKTYGNKCNFCNAVVESNGTL 177
Query: 478 ETKYSGPC 485
+ G C
Sbjct: 178 TLSHFGKC 185
Score = 49.2 bits (116), Expect = 4e-07
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 25/156 (16%)
Query: 51 VQCQPCKKTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCR 110
+ + +DC ++G +C NPVCG+DG Y C
Sbjct: 55 KEHDGECREAVPMDCSRYPNTTSEEGKVMILCNKAL--------NPVCGTDGVTYDNECV 106
Query: 111 LRKRACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDT 170
L + + + G C+ + + +
Sbjct: 107 LCAHNLEQGTSVGKKHDGECRKELAA-----------------VSVDCSEYPKPACTLEY 149
Query: 171 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
+CG+D TY + C+ A ++ +++ G C
Sbjct: 150 RPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185
Score = 46.9 bits (110), Expect = 3e-06
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 26/151 (17%)
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
+DC ++G +C D P+CG+DG + + C L I
Sbjct: 3 VDCSRFPNTTNEEGKDVLVCTEDL--------RPICGTDGVTH-SECLLCAYNIEYGTNI 53
Query: 396 SVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGS 455
S ++ + C + C +CG+
Sbjct: 54 SKEH---DGECREAVPMDCSRYPNT---------TSEEGKVMILCNKALN-----PVCGT 96
Query: 456 NHVTYPSWCEMKADECQQRIVIETKYSGPCH 486
+ VTY + C + A +Q + K+ G C
Sbjct: 97 DGVTYDNECVLCAHNLEQGTSVGKKHDGECR 127
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose
octasulphate, hormone/growth factor complex; HET: SO4;
1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB:
1lr8_A* 1lr9_A
Length = 74
Score = 67.2 bits (164), Expect = 2e-14
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
+C+ V C GK C +++ P C C C + + VCG DG TY + C L +A C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRC-VCAPDC-SNITWKGPVCGLDGKTYRNECALLKARCK 60
Query: 194 RGKSIPIAYRGHCK 207
+ + Y+G CK
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 67.2 bits (164), Expect = 2e-14
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+C+ V C GK C +++ P C C C + + VCG DG TY + C L +A C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRC-VCAPDC-SNITWKGPVCGLDGKTYRNECALLKARCK 60
Query: 270 RGKSIPIAYRGHCK 283
+ + Y+G CK
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 61.8 bits (150), Expect = 2e-12
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 59 TCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACR 117
TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARCK 60
Query: 118 KNEVISVDYFGTCQ 131
+ + V Y G C+
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 61.8 bits (150), Expect = 2e-12
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 332 TCENIDCGEGKKCAI-KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACR 390
TCEN+DCG GKKC + KK P+C+CAPDC + PVCG DG+ Y+ C L K C+
Sbjct: 3 TCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI--TWKGPVCGLDGKTYRNECALLKARCK 60
Query: 391 KNEVISVDYFGTCQ 404
+ + V Y G C+
Sbjct: 61 EQPELEVQYQGKCK 74
Score = 48.4 bits (115), Expect = 8e-08
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
TC N+ C PG+ C + + PRC C P C +CG + TY + C +
Sbjct: 3 TCENVDCGPGKKCRMN-KKNKPRCV-C--APDCS---NITWKGPVCGLDGKTYRNECALL 55
Query: 468 ADECQQRIVIETKYSGPC 485
C+++ +E +Y G C
Sbjct: 56 KARCKEQPELEVQYQGKC 73
>1tbr_R RHODNIIN; complex (serine protease-inhibitor), kazal-type
inhibitor, T complex (serine protease-inhibitor)
complex; 2.60A {Rhodnius prolixus} SCOP: g.68.1.1
g.68.1.1 PDB: 1tbq_R
Length = 103
Score = 62.5 bits (151), Expect = 2e-12
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 23/111 (20%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHC 232
VCG+DG TY + C L A + + G C+P
Sbjct: 15 VCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEP--------------------DEDE 54
Query: 233 NRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 283
+ C VCG+D +TY++ C L A+ + + + G C+
Sbjct: 55 DVCQECDGDEY---KPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 57.5 bits (138), Expect = 1e-10
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 23/113 (20%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIP 154
+ VCGSDG Y C L + + G C+
Sbjct: 13 HRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEP--------------------DE 52
Query: 155 HCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 207
+ C VCG+D +TY++ C L A+ + + + G C+
Sbjct: 53 DEDVCQECDGDEY---KPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 50.9 bits (121), Expect = 2e-08
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 21/107 (19%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAP 357
G+DG TY + C L A + + G C+
Sbjct: 17 GSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDE---------------------DED 55
Query: 358 DCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
C++ PVCGSD Y CRL + + + + + G C+
Sbjct: 56 VCQECDGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102
Score = 46.3 bits (109), Expect = 9e-07
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 29/120 (24%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNG 427
+ VCGSDG Y C L + + G C+
Sbjct: 13 HRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEP---------------------- 50
Query: 428 SPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPCHS 487
+ C +CGS+ +TY + C ++ +E K+ GPC +
Sbjct: 51 ---DEDEDVCQECDGDE----YKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCRT 103
Score = 40.5 bits (94), Expect = 1e-04
Identities = 17/78 (21%), Positives = 26/78 (33%)
Query: 55 PCKKTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 114
PC C + C++ PVCGSD Y CRL
Sbjct: 26 PCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQECDGDEYKPVCGSDDITYDNNCRLECA 85
Query: 115 ACRKNEVISVDYFGTCQT 132
+ + + + + G C+T
Sbjct: 86 SISSSPGVELKHEGPCRT 103
Score = 28.2 bits (62), Expect = 2.2
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 453 CGSNHVTYPSWCEMKADECQQRIVIETKYSGPCHSQ 488
CGS+ TY + C + + + + + GPC
Sbjct: 16 CGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPD 51
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 65.8 bits (159), Expect = 2e-12
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHC-NRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAAC 192
C C GK C LD+N P C + C P + +VC D T++S+CH C
Sbjct: 5 PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64
Query: 193 R-----RGKSIPIAYRGHCKPGSCD 212
+G + + Y G CK
Sbjct: 65 TLEGTKKGHKLHLDYIGPCKYIPPC 89
Score = 65.0 bits (157), Expect = 4e-12
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 210 SCDRVTCPSGKFCILDQNLIPHC-NRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAAC 268
C C GK C LD+N P C + C P + +VC D T++S+CH C
Sbjct: 5 PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64
Query: 269 R-----RGKSIPIAYRGHCK 283
+G + + Y G CK
Sbjct: 65 TLEGTKKGHKLHLDYIGPCK 84
Score = 56.9 bits (136), Expect = 2e-09
Identities = 24/158 (15%), Positives = 46/158 (29%), Gaps = 7/158 (4%)
Query: 332 TCENIDCGEGKKCAI-KKGYPKCICA-PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 389
C+N C GK C + + P C+C P VC +D + + + C C
Sbjct: 5 PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64
Query: 390 R-----KNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRH 444
K + +DY G C+ C + + + D +
Sbjct: 65 TLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTE 124
Query: 445 QGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYS 482
+ L N + + + + ++
Sbjct: 125 KQKLRVKKIHENEKRLEAGDHPEKNYNMYIFPVHWQFG 162
Score = 51.9 bits (123), Expect = 1e-07
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 59 TCENIDCGEGKKCAI-KKGYPKCICA-PDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 116
C+N C GK C + + P C+C P VC +D + + + C C
Sbjct: 5 PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64
Query: 117 R-----KNEVISVDYFGTCQTGSCD 136
K + +DY G C+
Sbjct: 65 TLEGTKKGHKLHLDYIGPCKYIPPC 89
Score = 48.0 bits (113), Expect = 2e-06
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
C N C+ G+ C D N +P C C P SCP +C +++ T+ S C
Sbjct: 5 PCQNHHCKHGKVCELD-ENNTPMCV-CQDPTSCPAPI--GEFEKVCSNDNKTFDSSCHFF 60
Query: 468 ADECQQRIV-----IETKYSGPCHSQELFLFEE 495
A +C + Y GPC L E
Sbjct: 61 ATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSE 93
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.5 bits (128), Expect = 1e-07
Identities = 53/308 (17%), Positives = 90/308 (29%), Gaps = 119/308 (38%)
Query: 2 GQSGRCTELLSEKVGREECCKEANGLGAAWSKEDLEPG-----TMFFWRVLGGGVQCQ-- 54
G +G L++ A + S E T+ F+ GV+C
Sbjct: 269 GATGHSQGLVT-----------AVAIAETDSWESFFVSVRKAITVLFFI----GVRCYEA 313
Query: 55 ------PCKKTCENIDCGEGKKC---AIKKGYPKCICAPDCKQRGRH----------MRN 95
P ++++ EG +I + + H + N
Sbjct: 314 YPNTSLPPSILEDSLENNEGVPSPMLSIS-NLTQEQVQDYVNKTNSHLPAGKQVEISLVN 372
Query: 96 -P----VCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQ 150
V G +++ L RK PSG LDQ
Sbjct: 373 GAKNLVVSG----PPQSLYGLN-LTLRK-------------------AKAPSG----LDQ 404
Query: 151 NLIPHCNRCIR------------HC--VTPSSDT-HQVCGTDGVTYESACHLREAACRRG 195
+ IP R ++ H + P+SD ++ + V++ +A ++
Sbjct: 405 SRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSF-NAKDIQ------- 456
Query: 196 KSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHCNRCI-RHCV-----TPSSDTHQV 249
IP+ Y GS D +L ++ CI R V T TH +
Sbjct: 457 --IPV-Y--DTFDGS-D--------LRVLSGSISERIVDCIIRLPVKWETTTQFKATHIL 502
Query: 250 -CGTDGVT 256
G G +
Sbjct: 503 DFGPGGAS 510
Score = 41.6 bits (97), Expect = 6e-04
Identities = 56/343 (16%), Positives = 86/343 (25%), Gaps = 121/343 (35%)
Query: 180 TYE---------SACHLREAACRRGKSIPIAYRG----------HCKPGSCDRVTCP-SG 219
TY SA L E + + +G P ++ P S
Sbjct: 179 TYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC 238
Query: 220 KFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYE--SACHLREAACRRGKSIPIA 277
+ Q L + TP + G G + +A A S
Sbjct: 239 PLIGVIQ-LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTA-----VAIAETDSWESF 292
Query: 278 YRGHCKLTESSIKT-FW-GVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCEN 335
+ +I F+ GV C+ EA S+P + + + EN
Sbjct: 293 F----VSVRKAITVLFFIGV-----------RCY--EAYPNT--SLPPSIL---EDSLEN 330
Query: 336 IDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVI 395
EG P M L + +V
Sbjct: 331 ---NEG--------------VP------SPM-----------------LSISNLTQEQV- 349
Query: 396 SVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGS 455
Q V N G+ L NG + S GP P L G
Sbjct: 350 --------QDYVNKTNSHLPAGKQVEISLVNG-AKNLVVS----------GP-PQSLYGL 389
Query: 456 NHVTYPSWCEMKADECQ----QR-IVIETKY---SGPCHSQEL 490
N + D+ + +R + ++ + P HS L
Sbjct: 390 NLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLL 432
>1y1b_A Elastase inhibitor; non-classical, kazal-type, protease inhibitor,
CSH motif, hydrolase inhibitor; NMR {Synthetic} PDB:
1y1c_A
Length = 48
Score = 44.1 bits (104), Expect = 1e-06
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 79 KCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
K C C + +PVCGSDG Y C L +CR + I + + G C
Sbjct: 1 KPDCPLICTMQY----DPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 44.1 bits (104), Expect = 1e-06
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 352 KCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
K C C + +PVCGSDG Y C L +CR + I + + G C
Sbjct: 1 KPDCPLICTMQY----DPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 41.8 bits (98), Expect = 9e-06
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCG+DG+TY +AC L A+CR I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 41.8 bits (98), Expect = 9e-06
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCG+DG+TY +AC L A+CR I + ++G C
Sbjct: 15 VCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 37.2 bits (86), Expect = 5e-04
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+DG+TY +AC L A+CR I + ++G C
Sbjct: 17 GSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
Score = 32.9 bits (75), Expect = 0.014
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 438 PSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
P CP P +CGS+ +TY + C + C+ IE + G C
Sbjct: 2 PDCPLICTMQYDP-VCGSDGITYGNACMLLGASCRSDTPIELVHKGRC 48
>1cgj_I Pancreatic secretory trypsin inhibitor (kazal type) variant 4;
serine protease/inhibitor complex; 2.30A {Homo sapiens}
SCOP: g.68.1.1
Length = 56
Score = 43.3 bits (102), Expect = 4e-06
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 154 PHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
C + C + + VCGTDG TY + C L +R SI I G C
Sbjct: 7 AKCYNELNGC---TLEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 43.3 bits (102), Expect = 4e-06
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 230 PHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
C + C + + VCGTDG TY + C L +R SI I G C
Sbjct: 7 AKCYNELNGC---TLEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 36.0 bits (83), Expect = 0.001
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
GTDG TY + C L +R SI I G C
Sbjct: 25 GTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 35.2 bits (81), Expect = 0.003
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
PVCG+DG Y C L ++ I + G C
Sbjct: 21 RPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 35.2 bits (81), Expect = 0.003
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
PVCG+DG Y C L ++ I + G C
Sbjct: 21 RPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
Score = 31.4 bits (71), Expect = 0.068
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 453 CGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
CG++ TYP+ C + + +++ I + SGPC
Sbjct: 24 CGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56
>2f3c_I Thrombin inhibitor infestin; serine protease - inhibitor complex,
kazal-type domain, hydrolase/hydrolase inhibitor
complex; 2.50A {Triatoma infestans} SCOP: g.68.1.1 PDB:
1kma_A
Length = 55
Score = 42.6 bits (100), Expect = 7e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 171 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCD 212
H+VCG+DG TY + C L A + + G C P D
Sbjct: 13 HRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDPNDHD 54
Score = 39.5 bits (92), Expect = 9e-05
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 247 HQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 283
H+VCG+DG TY + C L A + + G C
Sbjct: 13 HRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCD 49
Score = 36.8 bits (85), Expect = 8e-04
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTGSCD 136
+ VCGSDG Y C L + + G C D
Sbjct: 13 HRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDPNDHD 54
Score = 34.5 bits (79), Expect = 0.005
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
+ VCGSDG Y C L + + G C
Sbjct: 13 HRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCD 49
Score = 33.7 bits (77), Expect = 0.008
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQ 331
G+DG TY + C L A + + G C
Sbjct: 17 GSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDP 50
Score = 32.9 bits (75), Expect = 0.019
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 452 LCGSNHVTYPSWCEMKADECQQRIVIETKYSGPCHSQE 489
+CGS+ TY + C + + + + + + GPC +
Sbjct: 15 VCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDPND 52
>1uvf_A Serine proteinase inhibitor kazal type 5; trypsin inhibitor,
protease; NMR {Homo sapiens}
Length = 61
Score = 42.6 bits (100), Expect = 7e-06
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 207
VCG DG TY + C L R + I G C+
Sbjct: 27 VCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE 61
Score = 42.6 bits (100), Expect = 7e-06
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 283
VCG DG TY + C L R + I G C+
Sbjct: 27 VCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE 61
Score = 37.5 bits (87), Expect = 5e-04
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCK 330
G DG TY + C L R + I G C+
Sbjct: 29 GDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE 61
Score = 37.2 bits (86), Expect = 6e-04
Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 74 KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 131
K C + PVCG DG+ Y C L + + G C+
Sbjct: 8 KDYRVLPRIGYLCPK----DLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE 61
Score = 37.2 bits (86), Expect = 6e-04
Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 347 KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
K C + PVCG DG+ Y C L + + G C+
Sbjct: 8 KDYRVLPRIGYLCPK----DLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE 61
Score = 31.8 bits (72), Expect = 0.045
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 428 SPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
S C+ P + L P+ CG + TY + C + + ++ + +G C
Sbjct: 4 SEMCKDYRVLPRIGYLCPKDLKPV-CGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 60
>1pce_A PEC-60; proteinase inhibitor(kazal type); NMR {Sus scrofa} SCOP:
g.68.1.1
Length = 60
Score = 42.5 bits (100), Expect = 8e-06
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCGTDGVTYES C L A + I I G C
Sbjct: 27 VCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 42.5 bits (100), Expect = 8e-06
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCGTDGVTYES C L A + I I G C
Sbjct: 27 VCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 37.1 bits (86), Expect = 6e-04
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
GTDGVTYES C L A + I I G C
Sbjct: 29 GTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 36.8 bits (85), Expect = 7e-04
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 84 PDCKQRGRHMR-----NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
P C+ +PVCG+DG Y++ C+L + I + G C
Sbjct: 9 PICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 36.8 bits (85), Expect = 7e-04
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 357 PDCKQRGRHMR-----NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
P C+ +PVCG+DG Y++ C+L + I + G C
Sbjct: 9 PICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
Score = 34.4 bits (79), Expect = 0.005
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 429 PRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
P C+ + P C + +CG++ VTY S C++ + + I+ G C
Sbjct: 9 PICEHMTESPDCSRIYD-----PVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60
>1uvg_A Serine proteinase inhibitor kazal type 5; trypsin inhibitor,
protease; NMR {Homo sapiens}
Length = 78
Score = 42.8 bits (100), Expect = 9e-06
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPS 218
VCG DG TY + C L R + I G C+ S T S
Sbjct: 27 VCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESSTPGTTAAS 72
Score = 40.5 bits (94), Expect = 6e-05
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTESSIKT 291
VCG DG TY + C L R + I G C+ + + T
Sbjct: 27 VCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESSTPGTT 69
Score = 40.1 bits (93), Expect = 8e-05
Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 74 KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTG 133
K C + PVCG DG+ Y C L + + G C+
Sbjct: 8 KDYRVLPRIGYLCPK----DLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEES 63
Query: 134 SCDRVTCPS 142
S T S
Sbjct: 64 STPGTTAAS 72
Score = 37.4 bits (86), Expect = 8e-04
Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 347 KKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMA 406
K C + PVCG DG+ Y C L + + G C+ +
Sbjct: 8 KDYRVLPRIGYLCPK----DLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEES 63
Query: 407 VTCANIQC 414
T
Sbjct: 64 STPGTTAA 71
Score = 36.2 bits (83), Expect = 0.002
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTC 333
G DG TY + C L R + I G C+++
Sbjct: 29 GDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEESS 64
Score = 30.8 bits (69), Expect = 0.19
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 428 SPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPCHS 487
S C+ P + L P+ CG + TY + C + + ++ + +G C
Sbjct: 4 SEMCKDYRVLPRIGYLCPKDLKPV-CGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEE 62
>1tgs_I Pancreatic secretory trypsin inhibitor (kazal type); complex
(proteinase/inhibitor); 1.80A {Sus scrofa} SCOP:
g.68.1.1 PDB: 1cgi_I 1hpt_A
Length = 56
Score = 39.9 bits (93), Expect = 6e-05
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 154 PHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
C + C + VCGTDG+TY + C L +R + I G C
Sbjct: 7 ATCTSEVSGC---PKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 39.9 bits (93), Expect = 6e-05
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 230 PHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
C + C + VCGTDG+TY + C L +R + I G C
Sbjct: 7 ATCTSEVSGC---PKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 33.3 bits (76), Expect = 0.012
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
GTDG+TY + C L +R + I G C
Sbjct: 25 GTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 32.6 bits (74), Expect = 0.023
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
NPVCG+DG Y C L ++ + + G C
Sbjct: 21 NPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 32.6 bits (74), Expect = 0.023
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
NPVCG+DG Y C L ++ + + G C
Sbjct: 21 NPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
Score = 27.9 bits (62), Expect = 1.1
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 452 LCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
+CG++ +TY + C + ++ +++ + + SGPC
Sbjct: 23 VCGTDGITYSNECVLCSENKKRQTPVLIQKSGPC 56
>2erw_A Serine protease inhibitor infestin; kazal type domain, blood
clotting, hydrolase inhibitor; 1.40A {Triatoma
infestans} SCOP: g.68.1.1
Length = 56
Score = 39.5 bits (92), Expect = 7e-05
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDR 213
VCG+DG TY + C L AA + + + + G C+ + ++
Sbjct: 15 VCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVEQ 55
Score = 38.3 bits (89), Expect = 2e-04
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTE 286
VCG+DG TY + C L AA + + + + G C+ +
Sbjct: 15 VCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSN 52
Score = 36.0 bits (83), Expect = 0.001
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 92 HMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTGSCDR 137
PVCGSDG+ Y C L A K + + + G CQ + ++
Sbjct: 10 RNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVEQ 55
Score = 34.5 bits (79), Expect = 0.005
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 365 HMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQ 404
PVCGSDG+ Y C L A K + + + G CQ
Sbjct: 10 RNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQ 49
Score = 34.5 bits (79), Expect = 0.005
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQT 332
G+DG TY + C L AA + + + + G C+++
Sbjct: 17 GSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRS 51
Score = 30.3 bits (68), Expect = 0.15
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 453 CGSNHVTYPSWCEMKADECQQRIVIETKYSGPCHSQEL 490
CGS+ TY + C + + ++ + G C +
Sbjct: 16 CGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNV 53
>2jxd_A Serine protease inhibitor kazal-type 2; anti-parallel beta sheet,
beta-bulge, disulfide bond, alpha helix, pyrrolidone
carboxylic acid, secreted; NMR {Homo sapiens}
Length = 62
Score = 39.1 bits (91), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCG+D TY + C L G +I I G C
Sbjct: 29 VCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 39.1 bits (91), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCG+D TY + C L G +I I G C
Sbjct: 29 VCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 35.7 bits (82), Expect = 0.002
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
NPVCGSD Y C L + I + G C
Sbjct: 27 NPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 35.7 bits (82), Expect = 0.002
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
NPVCGSD Y C L + I + G C
Sbjct: 27 NPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 34.1 bits (78), Expect = 0.008
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+D TY + C L G +I I G C
Sbjct: 31 GSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
Score = 29.5 bits (66), Expect = 0.30
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 452 LCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
+CGS+ TY + C + + I+ +GPC
Sbjct: 29 VCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62
>2leo_A Serine protease inhibitor kazal-type 7; esophageal cancer-related
gene 2, hydrol inhibitor; NMR {Homo sapiens}
Length = 66
Score = 38.1 bits (88), Expect = 4e-04
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
VCG+D +TY + CHL + + + + G C
Sbjct: 33 VCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 38.1 bits (88), Expect = 4e-04
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
VCG+D +TY + CHL + + + + G C
Sbjct: 33 VCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 35.4 bits (81), Expect = 0.003
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 330 KQTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRAC 389
+ + +DC KK + A C PVCGSD Y C L +
Sbjct: 5 SLSPKKVDCSIYKKY--------PVVAIPCPI----TYLPVCGSDYITYGNECHLCTESL 52
Query: 390 RKNEVISVDYFGTC 403
+ N + + G+C
Sbjct: 53 KSNGRVQFLHDGSC 66
Score = 35.0 bits (80), Expect = 0.004
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
PVCGSD Y C L + + N + + G+C
Sbjct: 31 LPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 33.1 bits (75), Expect = 0.020
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+D +TY + CHL + + + + G C
Sbjct: 35 GSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
Score = 29.6 bits (66), Expect = 0.39
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 431 CQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
+ CP + +CGS+++TY + C + + + ++ + G C
Sbjct: 17 KKYPVVAIPCPITYL-----PVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66
>1r0r_I Ovomucoid, omtky3; high resolution, serine protease, protein
inhibitor, hydrolase; 1.10A {Meleagris gallopavo} SCOP:
g.68.1.1 PDB: 1sgr_I 2gkr_I 1cho_I 1omt_A 1omu_A 1ppf_I*
1tur_A 1tus_A 3sgb_I 2ovo_A 4ovo_A 1iy5_A 1cso_I 1ct4_I
2sgf_I 2gkt_I 2gkv_A 2nu0_I 1m8b_A 1m8c_A ...
Length = 51
Score = 35.6 bits (82), Expect = 0.002
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
+CG+D TY + C+ A ++ +++ G C
Sbjct: 18 LCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 35.6 bits (82), Expect = 0.002
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
+CG+D TY + C+ A ++ +++ G C
Sbjct: 18 LCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 34.9 bits (80), Expect = 0.004
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Query: 75 KGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
YPK C P+CGSD + Y C N +++ +FG C
Sbjct: 4 SEYPKPACT--------LEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 34.9 bits (80), Expect = 0.004
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Query: 348 KGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
YPK C P+CGSD + Y C N +++ +FG C
Sbjct: 4 SEYPKPACT--------LEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 31.0 bits (70), Expect = 0.085
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G+D TY + C+ A ++ +++ G C
Sbjct: 20 GSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
Score = 26.4 bits (58), Expect = 2.9
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 452 LCGSNHVTYPSWCEMKADECQQRIVIETKYSGPC 485
LCGS++ TY + C + + + G C
Sbjct: 18 LCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 51
>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal
type serine protease inhibitor comple hydrolase
inhibitor; 2.60A {Carcinoscorpius rotundicauda}
Length = 75
Score = 35.7 bits (82), Expect = 0.003
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 32/97 (32%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVTCPSGKFCILDQNLIPHC 232
VCG +G Y++ C L +A +S C+ C + P C
Sbjct: 10 VCGANGEVYDNECFLNKAGIEPAESW-----ETCRGHELCPSVCT--------EEYDPVC 56
Query: 233 NRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 269
+G Y + C +
Sbjct: 57 -------------------VEGKIYGNRCMQSHFCGK 74
Score = 35.7 bits (82), Expect = 0.003
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKLTESSIKTFWGVWSGTDGVTYESAC 308
VCG +G Y++ C L +A +S RGH + + V +G Y + C
Sbjct: 10 VCGANGEVYDNECFLNKAGIEPAESWETC-RGHELCPSVCTEEYDPVCV--EGKIYGNRC 66
Query: 309 HLREAACR 316
+
Sbjct: 67 MQSHFCGK 74
Score = 31.8 bits (72), Expect = 0.077
Identities = 17/99 (17%), Positives = 26/99 (26%), Gaps = 32/99 (32%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIP 154
PVCG++G Y C L K + + TC+ C + P
Sbjct: 8 KPVCGANGEVYDNECFLNKAGIE-----PAESWETCRGHELCPSVCT--------EEYDP 54
Query: 155 HCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR 193
C +G Y + C +
Sbjct: 55 VC-------------------VEGKIYGNRCMQSHFCGK 74
Score = 29.5 bits (66), Expect = 0.41
Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 30/93 (32%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYPKCICAP 357
G +G Y++ C L +A +S C+ C
Sbjct: 12 GANGEVYDNECFLNKAGIEPAESW-----ETCRGHEL--------------------CPS 46
Query: 358 DCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACR 390
C + +PVC +G+ Y C +
Sbjct: 47 VCTE----EYDPVC-VEGKIYGNRCMQSHFCGK 74
Score = 26.8 bits (59), Expect = 3.7
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCANI 412
PVCG++G Y C L K + + TC+ C ++
Sbjct: 8 KPVCGANGEVYDNECFLNKAGIE-----PAESWETCRGHELCPSV 47
>1bus_A Proteinase inhibitor IIA; HET: PCA; NMR {Bos taurus} SCOP: g.68.1.1
PDB: 2bus_A*
Length = 57
Score = 34.4 bits (79), Expect = 0.005
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 206
CG++G TY + C +A + G I + +RG C
Sbjct: 24 HCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 34.4 bits (79), Expect = 0.005
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHC 282
CG++G TY + C +A + G I + +RG C
Sbjct: 24 HCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 32.5 bits (74), Expect = 0.023
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 95 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 130
NP CGS+G Y C K + I++ + G C
Sbjct: 22 NPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 32.5 bits (74), Expect = 0.023
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 368 NPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTC 403
NP CGS+G Y C K + I++ + G C
Sbjct: 22 NPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
Score = 29.8 bits (67), Expect = 0.26
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 298 GTDGVTYESACHLREAACRRGKSIPIAYRGHC 329
G++G TY + C +A + G I + +RG C
Sbjct: 26 GSNGETYGNKCAFCKAVMKSGGKINLKHRGKC 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex,
beta propeller, cholesterol clearance, PCSK
autocatalytic cleavage; 7.01A {Homo sapiens}
Length = 791
Score = 34.8 bits (79), Expect = 0.063
Identities = 51/317 (16%), Positives = 77/317 (24%), Gaps = 30/317 (9%)
Query: 134 SCDRVTCPSGKFCILDQNLIPHCNRC--IRHCVTPS--SDTHQVCGTDGVTYESACHLRE 189
SC +TC F IP C C S S C E
Sbjct: 139 SCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFE 198
Query: 190 AACRRGKSIPIAYR----GHCKPGS----CDRVTCPSGKFCILDQNLIPHCNRC--IRHC 239
C G+ I ++R CK S C TC +F D N I +C C
Sbjct: 199 FHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDC 258
Query: 240 VTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK-------LTESSIKTF 292
S + V T + C G+ I + +
Sbjct: 259 KDMSDEVGCVNVT------LCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGT 312
Query: 293 WGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCG-EGKKCAIKKGYP 351
G ++ C + + C+ E D + C +G
Sbjct: 313 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGY 372
Query: 352 KCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCAN 411
KC C + GS + T ++ V +
Sbjct: 373 KCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDR--SEYTSLIPNLRNVVALD 430
Query: 412 IQCQPGQTCLTDLRNGS 428
+ + +DL
Sbjct: 431 TEVASNRIYWSDLSQRM 447
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces
ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Length = 286
Score = 32.5 bits (73), Expect = 0.25
Identities = 10/56 (17%), Positives = 18/56 (32%)
Query: 160 IRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCDRVT 215
+ TD ++ES AA + +P+ +PG+ V
Sbjct: 59 AAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVV 114
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 31.8 bits (72), Expect = 0.54
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 408 TCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGPLPPMLCGSNHVTYPSWCEMK 467
+C + CQP Q C+ C C P CP +C +N ++P++C+ K
Sbjct: 24 SCDKVFCQPWQRCI------EGTC-VCKLPYQCPKNGTA-----VCATNRRSFPTYCQQK 71
Query: 468 ADECQQRIVIETKYSGPCHSQELF 491
+ EC G C ++ F
Sbjct: 72 SLECLHPGTKFLNN-GTCTAEGKF 94
Score = 31.4 bits (71), Expect = 0.67
Identities = 38/230 (16%), Positives = 66/230 (28%), Gaps = 38/230 (16%)
Query: 58 KTCENIDCGEGKKCAIKKGYPKCICAP--DCKQRGRHMRNPVCGSDGRNYKTVCRLRKRA 115
+C+ + C ++C C+C C + G VC ++ R++ T C+ +
Sbjct: 23 LSCDKVFCQPWQRCI----EGTCVCKLPYQCPKNG----TAVCATNRRSFPTYCQQKSLE 74
Query: 116 CRKNEVISVDYFGTCQTGSCDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCG 175
C GTC GKF + ++ + + T +C
Sbjct: 75 CLHPG-TKFLNNGTCT---------AEGKFSVSLKHGNTDSEGIVEVKLVDQDKTMFICK 124
Query: 176 TDGVTYESA---CHLREAACRRGKSIPIAYR---GHCKPGSCDRVTCPSGKFCILDQNLI 229
+ A C + ++G ++ C V C G L +
Sbjct: 125 -SSWSMREANVAC--LDLGFQQGADTQRRFKLSDLSINSTECLHVHC-RGLETSLAE--- 177
Query: 230 PHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYR 279
C R + VC T + C GK I
Sbjct: 178 --CTFTKRRTMGYQDFADVVCYTQKADSPMDDFFQ---CVNGKYISQMKA 222
>1ldt_L LDTI, tryptase inhibitor; complex (hydrolase/inhibitor), hydrolase,
inflammation; 1.90A {Hirudo medicinalis} SCOP: g.68.1.1
PDB: 1an1_I 2kmo_A 2kmp_A 2kmq_A 2kmr_A
Length = 46
Score = 27.8 bits (62), Expect = 0.79
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 173 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCKPGSCD 212
VCG+DG TY ++C R + I G C G +
Sbjct: 13 VCGSDGRTYANSCIARCN------GVSIKSEGSCPTGILN 46
Score = 25.5 bits (56), Expect = 5.5
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 249 VCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK 283
VCG+DG TY ++C R + I G C
Sbjct: 13 VCGSDGRTYANSCIARCN------GVSIKSEGSCP 41
>3tjq_A Serine protease HTRA1; hydrolase; 2.00A {Homo sapiens}
Length = 140
Score = 29.9 bits (66), Expect = 1.0
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 155 HCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR----RGKSIPIAYRGHCKP 208
R + + + + VCG+D TY + C LR A+ R + + RG C
Sbjct: 82 TVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACGN 139
Score = 29.9 bits (66), Expect = 1.0
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 231 HCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAACR----RGKSIPIAYRGHCK 283
R + + + + VCG+D TY + C LR A+ R + + RG C
Sbjct: 82 TVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRAASRRSERLHRPPVIVLQRGACG 138
Score = 27.6 bits (60), Expect = 5.4
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 338 CGEGKKCAIKKGYPKCICAPDCKQRG---RHMRNPVCGSDGRNYKTVCRLRKRACRK 391
CGEG +C + G P Q G PVCGSD Y +C+LR + R
Sbjct: 65 CGEGLQCVVPFGVPASATVRRRAQAGLCVCASSEPVCGSDANTYANLCQLRAASRRS 121
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 29.4 bits (66), Expect = 3.0
Identities = 8/89 (8%), Positives = 20/89 (22%)
Query: 53 CQPCKKTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLR 112
C + + G++ I C C R + + +
Sbjct: 288 PVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCY 347
Query: 113 KRACRKNEVISVDYFGTCQTGSCDRVTCP 141
+ + + +G R+
Sbjct: 348 LKLSSNGSPTKILHGRGGISGYTLRLCKM 376
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial
hypercholesterolemia, cholestero metabolism, lipid
transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens}
SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1
g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A
1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Length = 699
Score = 29.0 bits (64), Expect = 4.6
Identities = 51/317 (16%), Positives = 78/317 (24%), Gaps = 32/317 (10%)
Query: 135 CDRVTCPSGKFCILDQNLIPHCNRC--IRHCVTPS--SDTHQVCGTDGVTYESACHLREA 190
C +TC F IP C C S S C E
Sbjct: 122 CPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEF 181
Query: 191 ACRRGKSIPIAYR----GHCKPGS----CDRVTCPSGKFCILDQNLIPHCNRC--IRHCV 240
C G+ I ++R CK S C TC +F D N I +C C
Sbjct: 182 HCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDC- 240
Query: 241 TPSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGHCK---------LTESSIKT 291
SD C + + C G+ I + + +
Sbjct: 241 KDMSD-EVGCVNVTLC----EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTN 295
Query: 292 FWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRGHCKQTCENIDCGEGKKCAIKKGYP 351
+G E C G + R C++ D ++ GY
Sbjct: 296 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYK 355
Query: 352 KCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKRACRKNEVISVDYFGTCQMAVTCAN 411
V + +RK ++E S+ V +
Sbjct: 356 CQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALD 412
Query: 412 IQCQPGQTCLTDLRNGS 428
+ + +DL
Sbjct: 413 TEVASNRIYWSDLSQRM 429
Score = 28.2 bits (62), Expect = 7.0
Identities = 58/450 (12%), Positives = 100/450 (22%), Gaps = 53/450 (11%)
Query: 50 GVQCQPCKKTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVC 109
G +C+ + C++ C K C + +C+ + ++ C
Sbjct: 3 GDRCERNEFQCQDGKCISYKWV--------CDGSAECQDGSDESQETCLSVTCKSGDFSC 54
Query: 110 RLRKRACRKNEVISVDYFGTCQTGS----CDRVTCPSGKFCILDQNLIPHCNRCIRHCVT 165
R C D C GS C TC +F D I C
Sbjct: 55 GGRVNRCIPQFWR-CDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDC 113
Query: 166 PSSDTHQVCGTDGVTYESACHLREAACRRGKSIPIAYRGH----CKPGS----------- 210
C C C IP + C+ GS
Sbjct: 114 LDGSDEASCPV------LTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLY 167
Query: 211 ---CDRVTCPSGKFCILDQNLIPHCNRCIRHCVTPSSDTHQVCGTDGVTYESACHLREAA 267
D C + +F L I RC + C + C E
Sbjct: 168 VFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAV------ATCRPDEFQ 221
Query: 268 CRRGKSIPIAYRGHCKLTESSIKTFWGVWSGTDGVTYESACHLREAACRRGKSIPIAYRG 327
C G I + + + V + C G+ I +
Sbjct: 222 CSDGNCIHGSRQCDR------EYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVC 275
Query: 328 HCKQTCENIDCGEGKKCAIKKGYPKCICAPDCKQRGRHMRNPVCGSDGRNYKTVCRLRKR 387
+ + C + K+C G +C+ + + + R+
Sbjct: 276 NMARDCRDWSDEPIKEC----GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 331
Query: 388 ACRKNEVISVDYFGTCQMAVTCANIQCQPGQTCLTDLRNGSPRCQTCSYPPSCPHRHQGP 447
C QC+ G + + H +
Sbjct: 332 EDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKM 391
Query: 448 LPPMLCGSNHVTYPSWCEMKADECQQRIVI 477
++ + E +
Sbjct: 392 TLDRSEYTSLIPNLRNVVALDTEVASNRIY 421
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur
cluster, adenosine diphosphate, nucleotide-binding; HET:
ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Length = 607
Score = 28.0 bits (63), Expect = 8.2
Identities = 10/51 (19%), Positives = 13/51 (25%), Gaps = 17/51 (33%)
Query: 206 CKPGSCDRV----TCP---SGKFCI----------LDQNLIPHCNRCIRHC 239
C P C CP G I + + C C+ C
Sbjct: 29 CNPDKCGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGICVHKC 79
>1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein,
PSI, protein structure initiative, midwest center for
structural genomics; HET: MSE; 1.80A {Bacillus subtilis}
SCOP: b.58.1.2
Length = 195
Score = 27.3 bits (60), Expect = 9.3
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 36 LEPGTMFFWR---VLGGGVQCQPCKKTCENIDCGEGKKCAIKKGYPKCI 81
L+ G+ + L + PC + E I + + + +
Sbjct: 109 LKEGSRIIFPSGAALLCEGENDPCIQPGEVIQSYYPDQPKLASAFVRHA 157
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.138 0.482
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,991,138
Number of extensions: 498065
Number of successful extensions: 2167
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1750
Number of HSP's successfully gapped: 388
Length of query: 498
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 400
Effective length of database: 3,965,535
Effective search space: 1586214000
Effective search space used: 1586214000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (26.9 bits)