Your job contains 1 sequence.
>psy17644
MSKLEYIPAPGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGI
RDDIDHEDDEESYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS
TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK
ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG
PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR
IIDMVKMGATKLNRVTFLVLDEADRMFDMG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17644
(330 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 1162 5.4e-118 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 1051 3.1e-106 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 1043 2.2e-105 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 1038 7.5e-105 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 1035 1.6e-104 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 1035 1.6e-104 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 1034 2.0e-104 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 1031 4.1e-104 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 1030 5.3e-104 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 1029 6.7e-104 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 981 8.2e-99 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 927 4.3e-93 1
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 848 1.0e-84 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 720 3.7e-71 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 699 4.2e-71 2
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 603 8.2e-60 2
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 609 9.3e-59 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 606 2.8e-58 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 606 2.8e-58 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 603 6.0e-58 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 603 6.0e-58 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 602 7.6e-58 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 602 7.7e-58 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 600 1.3e-57 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 563 9.9e-57 2
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 591 1.2e-56 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 550 2.5e-55 2
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 531 1.1e-54 2
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 567 4.0e-54 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 553 1.9e-53 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 552 2.4e-53 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 552 2.4e-53 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 552 2.4e-53 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 552 2.4e-53 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 552 2.4e-53 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 552 2.4e-53 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 552 2.4e-53 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 560 4.7e-53 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 548 6.3e-53 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 556 1.1e-52 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 531 4.0e-51 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 532 5.9e-51 1
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 527 1.1e-50 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 527 1.1e-50 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 525 1.7e-50 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 525 1.7e-50 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 521 4.6e-50 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 519 7.4e-50 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 523 2.5e-49 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 513 3.2e-49 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 513 3.2e-49 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 510 6.7e-49 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 507 1.4e-48 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 507 1.4e-48 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 507 1.4e-48 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 507 1.4e-48 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 507 1.4e-48 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 507 1.4e-48 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 505 2.3e-48 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 505 2.3e-48 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 510 2.5e-48 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 502 4.7e-48 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 500 7.7e-48 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 500 7.7e-48 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 499 9.8e-48 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 498 1.2e-47 1
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 497 1.0e-46 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 497 1.0e-46 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 489 1.1e-46 1
SGD|S000000441 - symbol:PRP5 "RNA helicase in the DEAD-bo... 447 5.7e-45 2
GENEDB_PFALCIPARUM|PFE0430w - symbol:PFE0430w "ATP-depend... 474 1.1e-43 1
UNIPROTKB|Q8I416 - symbol:PFE0430w "ATP-dependent RNA Hel... 474 1.1e-43 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 452 9.3e-42 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 437 6.3e-41 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 414 9.9e-39 1
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 411 1.4e-38 2
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 411 1.4e-38 2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 413 2.2e-38 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 416 3.0e-38 1
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 416 4.4e-38 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 403 4.8e-38 2
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 412 1.3e-37 1
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 412 1.3e-37 1
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 412 1.3e-37 1
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 412 1.3e-37 1
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 410 1.9e-37 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 408 6.9e-37 1
WB|WBGene00013214 - symbol:Y54G11A.3 species:6239 "Caenor... 392 2.1e-36 1
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 382 5.6e-36 2
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 378 8.3e-36 2
UNIPROTKB|E1BXX5 - symbol:DDX59 "Uncharacterized protein"... 362 2.7e-35 2
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 382 8.4e-35 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 382 9.4e-35 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 376 3.2e-34 1
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 367 2.5e-33 1
UNIPROTKB|J3QRQ7 - symbol:DDX5 "Probable ATP-dependent RN... 362 3.2e-33 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 368 4.6e-33 1
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 341 7.1e-33 2
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 355 1.8e-32 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 356 2.5e-32 1
WARNING: Descriptions of 735 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 223/327 (68%), Positives = 258/327 (78%)
Query: 6 YIPAPGSPSYKGNNASA--DTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXX 63
YIPAPGSP +A D+DSDEDPL+ FM GI+++V++E + K + +R
Sbjct: 108 YIPAPGSPGAPPTSAKKQEDSDSDEDPLEQFMAGINQQVEKEKRQQAPKP--PTQAVRGD 165
Query: 64 XXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIV 123
SYYRYM+ENPNAGL+D SD ++EYDEDGNPIAP K K IDPLPPI HS I
Sbjct: 166 IDDEDDEESYYRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIE 225
Query: 124 YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALR 183
YE EKNFY H+DIA L ++ +ELR G+ V+G PP PV+SFGHFGFDE L+KA+R
Sbjct: 226 YEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVR 285
Query: 184 KCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMG 243
K EYT PTPIQAQAVP ALSGRDIIG+AKTGSGKT AFIWPML+H+MDQK+L+PGDGP+G
Sbjct: 286 KAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIG 345
Query: 244 LILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIID 303
LILAPTRELS QIYNEAK+FGK YNL+VVCCYGGGSKW+QSKALE GAEI+V TPGR+ID
Sbjct: 346 LILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMID 405
Query: 304 MVKMGATKLNRVTFLVLDEADRMFDMG 330
MVKM AT L RVTFLVLDEADRMF MG
Sbjct: 406 MVKMKATNLRRVTFLVLDEADRMFHMG 432
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 205/330 (62%), Positives = 243/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + N+ SAD+DSD+DPL+AFM ++ + ++ K + K K+ + KGI
Sbjct: 83 LPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGI 142
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 143 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 201
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF HFGFDE LM
Sbjct: 202 EIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 261
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP A+SGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 262 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 321
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI++E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 322 PIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 381
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RVT+LV DEADRMFDMG
Sbjct: 382 LIDHVKKKATNLQRVTYLVFDEADRMFDMG 411
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 204/330 (61%), Positives = 242/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + N+ SAD+DSD+DPL+AFM ++ + ++ K + K K+ + KGI
Sbjct: 88 LPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF FGFDE LM
Sbjct: 207 EIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP A+SGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI++E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RVT+LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVTYLVFDEADRMFDMG 416
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 205/332 (61%), Positives = 244/332 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFM-KGIDKE-VKQEAKGV--KTKKIEEVK 58
L YIPA SP+ + N+ SAD+DSD+DPL+AFM + ++ + ++ K + K K+ + K
Sbjct: 88 LPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAESVENDQAARDMKRLEDKDKEKKNAK 147
Query: 59 GIRXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPID 118
GIR +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPID
Sbjct: 148 GIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPID 206
Query: 119 HSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVL 178
HS I Y EKNFY HE+I LTPQ+ ELR K + VSGA PP P SSF HFGFDE L
Sbjct: 207 HSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQL 266
Query: 179 MKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPG 238
M +RK EYT PTPIQ Q VP A+SGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPG
Sbjct: 267 MHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG 326
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTP 298
DGP+ +I+ PTREL QQI++E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TP
Sbjct: 327 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 386
Query: 299 GRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GR+ID VK AT L RVT+LV DEADRMFDMG
Sbjct: 387 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMG 418
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 203/330 (61%), Positives = 242/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ AD+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 203/330 (61%), Positives = 242/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ AD+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 203/330 (61%), Positives = 241/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + + AD+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFRSKPADSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 202/330 (61%), Positives = 241/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ D+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 202/330 (61%), Positives = 241/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ D+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 202/330 (61%), Positives = 241/330 (73%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ D+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPIDSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQETYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTK-KIIDPLPPIDHS 206
Query: 121 TIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMK 180
I Y EKNFY HE+I LTPQ+ +LR K + VSGA PP P SSF HFGFDE LM
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEPGDG
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG 326
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 196/336 (58%), Positives = 230/336 (68%)
Query: 4 LEYIPAPGSPSYK-----GNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTK----KI 54
L YIPA SP+ K G +DS++DPLDAFM ++ + ++ V+ I
Sbjct: 85 LPYIPAENSPTRKQFQSGGGGGGGGSDSEDDPLDAFMAEVEDQAAKDDGQVRVCHDYISI 144
Query: 55 EEVKGIRXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPL 114
+GIR +Y+RYM ENP AGL + + +++YD DGNPIAP K I PL
Sbjct: 145 SFSRGIRDDIEEEDDQEAYFRYMAENPTAGLTQEEEEEEVDYDSDGNPIAPTTKKIIMPL 204
Query: 115 PPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGF 174
PPIDHS I Y EKNFY HE+I+ LT E ELR K + VSGA PP P +SF HFGF
Sbjct: 205 PPIDHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGF 264
Query: 175 DEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKE 234
DE LM +RK EYT PTPIQ Q VP ALSGRD IG+AKTGSGKT AFIWP+LVHIMDQKE
Sbjct: 265 DEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKE 324
Query: 235 LEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIV 294
LEPG+GP+ +I+ PTREL QQI+ E KRFGK Y L V YGGGS W+Q+KAL+ GAEIV
Sbjct: 325 LEPGEGPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIV 384
Query: 295 VGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V TPGR+ID VK AT L RVTFLV DEADRMFDMG
Sbjct: 385 VCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMG 420
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 190/333 (57%), Positives = 233/333 (69%)
Query: 4 LEYIPAPGSPSYKG-NNASADTDSDEDPLDAFMKGIDKEVKQEAKGV--KTKKIEEVKGI 60
L YIPA SP+ + ++ D+DSD+DPL+AFM ++ + ++ K + K K+ + VKGI
Sbjct: 88 LPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKERKNVKGI 147
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHS 120
R +Y+RYM ENP AG+ + + +LEYD DGNPIAP K K IDPLPPIDHS
Sbjct: 148 RDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSK-KIIDPLPPIDHS 206
Query: 121 TIV--YEEVEKNFYQPHEDIARLTPQEAQELRAKSGIT-VSGADPPYPVSSFGHFGFDEV 177
+ Y E+ K Y ++ + + + I+ VSGA PP P SSF HFGFDE
Sbjct: 207 ELDRNYFEI-KIIYNTKDEC--IDASNLELINTLHFISRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 178 LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP 237
LM +RK EYT PTPIQ Q VP ALSGRD+IG+AKTGSGKT AFIWPML+HIMDQKELEP
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 238 GDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGT 297
GDGP+ +I+ PTREL QQI+ E KRFGK YNL V YGGGS W+Q+KAL+ GAEIVV T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 298 PGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
PGR+ID VK AT L RV++LV DEADRMFDMG
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG 416
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 175/330 (53%), Positives = 223/330 (67%)
Query: 13 PSYKGNNASADTDSDEDPLDAFMKGIDKEV-------KQEAKGVKTKKIEE---VKGI-R 61
P+ + +AD D +ED LDAFM GI+K+ +Q+ K K K E KG+ R
Sbjct: 104 PASSSSKLAADDDDEEDELDAFMAGIEKQASSDKKVSEQKEKDRKEGKDTEDPSKKGLGR 163
Query: 62 XXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHST 121
S +++MEE +ND D LEYDEDGN I K K IDPLP IDHS
Sbjct: 164 ADIDEEDMQESLFKFMEEYKEK--HEND-DEQLEYDEDGNIIWSWK-KVIDPLPDIDHSQ 219
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ KNFY+ HEDI RL + L+ + V G PP PV SF HF FD++LM+A
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGP 241
+RK EY PTPIQA A+P+ALSGRD++G+AKTGSGKT A++WP +VHIMDQ +L+ G+GP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGP 339
Query: 242 MGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALEL-GAEIVVGTPGR 300
+ +I+ PTREL+ Q++ EAK+F K YN++ +C YGGGSKW+QS L+ GAE+VV TPGR
Sbjct: 340 VAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGR 399
Query: 301 IIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
IID+VKMGAT R TFLV DEADRMFDMG
Sbjct: 400 IIDLVKMGATNFLRTTFLVFDEADRMFDMG 429
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 151/327 (46%), Positives = 204/327 (62%)
Query: 19 NASADTDSDEDPLDAFMKGIDKEVK-QEAKGVKT--KKIEEVKGIRXXXXXXXXXXSYYR 75
N + D D + DPLDAFM+ ++ + +K ++ ++ + +K R +Y+
Sbjct: 142 NQNEDEDDEIDPLDAFMENVNAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYK 201
Query: 76 YMEEN--PNAGLQDNDSDVDLEY--DEDG-----NPIAPKKSK---YIDPLPPIDHSTIV 123
++ + Q D DVD D+DG + +SK I+PLPPIDHS
Sbjct: 202 LRQKQLANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHSKEE 261
Query: 124 YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALR 183
Y E K FY+ H DIA LT ++ E+R I ++G D PV+SFGH+GFD++L++A+
Sbjct: 262 YIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIA 321
Query: 184 KCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMG 243
K +PTPIQ QA+P ALSGRD+I +AKTGSGKT FIWP + HIMDQ LE GDGP+
Sbjct: 322 KQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIA 381
Query: 244 LILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIID 303
L LAPTREL+ QIY E ++ K + L YGG SK Q K L+ G EI+V TPGR+ID
Sbjct: 382 LFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLID 441
Query: 304 MVKMGATKLNRVTFLVLDEADRMFDMG 330
M+K+ ATKLNRV++LVLDEAD+MFD G
Sbjct: 442 MIKLKATKLNRVSYLVLDEADKMFDFG 468
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 699 (251.1 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 154/327 (47%), Positives = 202/327 (61%)
Query: 17 GNNASADTDSDE-DPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSY-- 73
G+ A++ + DE DPLDAFM+GI +E+K +K+E K
Sbjct: 66 GSAAASGGEVDEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDDDDDPVESYLKAKKDL 125
Query: 74 -YRYMEENPNAGLQDNDS------DVD---LEYDEDGNPIAPKKSKYIDPLPPIDHSTIV 123
+ NAG ++ VD L+YD D NPI K K I+P+ +DHS+I
Sbjct: 126 GLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRK-IEPITALDHSSID 184
Query: 124 YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALR 183
YE + K+FY+ E I+ +T QE + R + GI VSG D PV +F GF +M A++
Sbjct: 185 YEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIK 244
Query: 184 KCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMG 243
K Y PT IQ QA+P LSGRD+IG+AKTGSGKT AF+ PM+VHIMDQ EL+ +GP+G
Sbjct: 245 KQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIG 304
Query: 244 LILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIID 303
+I APTREL+ QI+ EAK+F K Y L V YGG SK +Q K L+ G EIVV TPGR+ID
Sbjct: 305 VICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLID 364
Query: 304 MVKMGATKLNRVTFLVLDEADRMFDMG 330
M+KM A + R ++LVLDEADRMFD+G
Sbjct: 365 MLKMKALTMMRASYLVLDEADRMFDLG 391
Score = 39 (18.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 YIPAPGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQEAKG 48
Y+P PS +G + S D D D +D +M+ + E E G
Sbjct: 31 YVP----PSSRGGDNSEDADLDN--ID-YMENEEAEEDIEEGG 66
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 603 (217.3 bits), Expect = 8.2e-60, Sum P(2) = 8.2e-60
Identities = 135/318 (42%), Positives = 187/318 (58%)
Query: 25 DSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXXXXXSYYRYMEENPNA 83
D + DPLDA+M+ + +EVK+ + VK E K + ++ +
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKKK 281
Query: 84 G-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHSTIVYEEVEKNFYQPHE 136
G L +ND D +EY + + + ++K L P+DH I YE KNFY
Sbjct: 282 GELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 137 DIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 195
++A+++ +E R + GITV G P P+ S+ G ++ +L+K Y PTPIQ
Sbjct: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 196 QAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQ 255
QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+GP+ +I+ PTREL+ Q
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQ 460
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGA---TKL 312
I E K+F K L VVC YGG +Q L+ GAEI+V TPGR+IDM+ + T L
Sbjct: 461 ITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL 520
Query: 313 NRVTFLVLDEADRMFDMG 330
RVT++VLDEADRMFDMG
Sbjct: 521 RRVTYVVLDEADRMFDMG 538
Score = 43 (20.2 bits), Expect = 8.2e-60, Sum P(2) = 8.2e-60
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 9 APGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQEAK 47
+PGS + K N S + E + K DK+ K++ K
Sbjct: 106 SPGSKTKKTENRSRSKEKAEGGDSSKEKKKDKDDKEDEK 144
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 609 (219.4 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 143/315 (45%), Positives = 188/315 (59%)
Query: 23 DTDSDEDPLDAFMKGI-DKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSYYRYMEENP 81
DTD +EDPLDAFMK I K K+ G T+K GI + + + P
Sbjct: 171 DTDDEEDPLDAFMKEIATKNAKKT--GNSTQK---ASGI----------VTIVQEEKPEP 215
Query: 82 NAG-LQDNDSDVDLEYDE-DGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIA 139
G + +N+ ++D+ D+ D A L DHS + Y + +KNFY E+I
Sbjct: 216 EKGQVLENEDNMDMVIDDFDIETAAASLCHKGRMLAQTDHSKVYYRKFKKNFYIETEEIR 275
Query: 140 RLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 198
R+T E + R + ITV G D P P+ ++ G + +M L+K EY+ PT IQAQA+
Sbjct: 276 RMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAI 335
Query: 199 PAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYN 258
P+ +SGRD+IG+AKTGSGKT AF+ PM HI+DQ ELE GDGP+ +ILAPTREL+ Q Y
Sbjct: 336 PSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYK 395
Query: 259 EAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGA---TKLNRV 315
EA +F K L V C YGG +Q L+ GAEIVV TPGR+ID++ + T L RV
Sbjct: 396 EANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRV 455
Query: 316 TFLVLDEADRMFDMG 330
T+LVLDEADRMFD G
Sbjct: 456 TYLVLDEADRMFDKG 470
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 606 (218.4 bits), Expect = 2.8e-58, P = 2.8e-58
Identities = 138/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN D + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEME---DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDADKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 606 (218.4 bits), Expect = 2.8e-58, P = 2.8e-58
Identities = 138/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN D + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEME---DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDADKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 603 (217.3 bits), Expect = 6.0e-58, P = 6.0e-58
Identities = 137/328 (41%), Positives = 190/328 (57%)
Query: 16 KGNNASADTDSDE-DPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXXXXXSY 73
+G + + +E DPLDA+M+ + +EVK+ + VK E K +
Sbjct: 211 EGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTK 270
Query: 74 YRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHSTIVYEE 126
+E G L +ND D +EY + + + ++K L P+DH I YE
Sbjct: 271 KAVVETEKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEP 329
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 185
KNFY ++A++T +E R + GITV G P P+ ++ G ++ AL+K
Sbjct: 330 FRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKH 389
Query: 186 EYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLI 245
Y PTPIQ+QA+PA ++GRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+GP+ +I
Sbjct: 390 GYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVI 449
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR+IDM+
Sbjct: 450 MTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML 509
Query: 306 KMG---ATKLNRVTFLVLDEADRMFDMG 330
T L RVT++VLDEADRMFDMG
Sbjct: 510 AANNGRVTNLRRVTYVVLDEADRMFDMG 537
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 603 (217.3 bits), Expect = 6.0e-58, P = 6.0e-58
Identities = 137/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN + + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEVEGE---ELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDSDKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 602 (217.0 bits), Expect = 7.6e-58, P = 7.6e-58
Identities = 137/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN + + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEMEGE---ELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDSDKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 602 (217.0 bits), Expect = 7.7e-58, P = 7.7e-58
Identities = 137/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN + + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEMEGE---ELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDSDKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 600 (216.3 bits), Expect = 1.3e-57, P = 1.3e-57
Identities = 137/333 (41%), Positives = 191/333 (57%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN + + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 210 PAEAEKEGNEMEGE---ELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVT 266
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 267 VVTTKKAVVDSDKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 325
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 301 IIDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
+IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 538
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 563 (203.2 bits), Expect = 9.9e-57, Sum P(2) = 9.9e-57
Identities = 125/258 (48%), Positives = 164/258 (63%)
Query: 80 NPNAGLQDNDSDV---DLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHE 136
+PNA D++ V LE +E+ +A K+SK D + +DHS I YE+ +K+FY E
Sbjct: 330 DPNAN--DDERMVISETLEEEENLLALAAKRSKKKDVIT-VDHSKINYEDFKKDFYVEPE 386
Query: 137 DIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 195
++ L+P E ELRA GI + G D P PV+S+ G + + Y PT IQA
Sbjct: 387 ELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQA 446
Query: 196 QAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQ 255
QA+PA SGRD+IGVAKTGSGKT AF+ PM HI DQ+ L+ G+GP+ +I+ PTREL+ Q
Sbjct: 447 QAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQ 506
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGA---TKL 312
I+ E K F K N+ C YGG DQ L+ GAEIVV TPGR+ID++ A T L
Sbjct: 507 IFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNL 566
Query: 313 NRVTFLVLDEADRMFDMG 330
+R T+LVLDEADRMFD+G
Sbjct: 567 HRCTYLVLDEADRMFDLG 584
Score = 55 (24.4 bits), Expect = 9.9e-57, Sum P(2) = 9.9e-57
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 17 GNNASADTDSDE-DPLDAFMKGI 38
GN +A + DE DPLDA+M +
Sbjct: 290 GNEQAASMEEDEVDPLDAYMASL 312
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 591 (213.1 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 131/318 (41%), Positives = 183/318 (57%)
Query: 23 DTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSYYRYMEENPN 82
+ + DPLDA+M+ + +EVK+ G K + KG +
Sbjct: 208 EVGEEVDPLDAYMEEVKEEVKKFNMGTM-KGANDKKGGMSVTKVVTVVKTKKMPHATKKK 266
Query: 83 AGLQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHSTIVYEEVEKNFYQPHE 136
L +ND D +EY + + + ++K L P+DH I YE KNFY
Sbjct: 267 GELMENDQDA-MEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVP 325
Query: 137 DIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 195
++AR++P+E E R + GI+V G P P+ ++ G ++ AL+K Y PTPIQA
Sbjct: 326 ELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQA 385
Query: 196 QAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQ 255
QA+PA +SGRD+IG+AKTGSGKT AF+ PM HI+DQ+ + +GP+ +I+ PTREL+ Q
Sbjct: 386 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQ 445
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMG---ATKL 312
I E K+F K L VVC YGG +Q L+ GAEI+V TPGR+IDM+ T L
Sbjct: 446 ITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNL 505
Query: 313 NRVTFLVLDEADRMFDMG 330
RVT++V+DEADRMFDMG
Sbjct: 506 RRVTYVVIDEADRMFDMG 523
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 550 (198.7 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 125/261 (47%), Positives = 161/261 (61%)
Query: 79 ENPNAGLQDNDSDVDL----EYD-EDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQ 133
+ P A D + DV + E D ED IA K K D +P +DH+ + YE + FY
Sbjct: 449 QEPEAIFGD-EHDVSMTAVGEGDAEDFLAIASKAKKKKD-IPTVDHNKVEYEPFRRKFYT 506
Query: 134 PHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
D+A+++ +EA LR + GI V G D P PV + G + + K + S T
Sbjct: 507 EPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTS 566
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTREL 252
IQAQA+PA +SGRD+IGVAKTGSGKT AF+ PM HI DQ+ LE +GP+GLI+ PTREL
Sbjct: 567 IQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTREL 626
Query: 253 SQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGA--- 309
+ QI+ + K F K NL VC YGG DQ L+ GAEI+V TPGR+ID++ A
Sbjct: 627 ATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRV 686
Query: 310 TKLNRVTFLVLDEADRMFDMG 330
T L RVT++VLDEADRMFDMG
Sbjct: 687 TNLRRVTYVVLDEADRMFDMG 707
Score = 59 (25.8 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 16 KGNNASADTDSDE-DPLDAFMKGIDKEVKQEAK-GVKTKKIEEVKGI 60
+ + D +E DPLDAFM + + + K G K K +E + I
Sbjct: 408 EADKMEVDAQEEELDPLDAFMSELAESAPPKKKAGAKFSKAQEPEAI 454
Score = 46 (21.3 bits), Expect = 5.9e-54, Sum P(2) = 5.9e-54
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 3 KLEYIPAPGSPSYKGNNASADTDSDEDPLDAFMK-GIDKEVKQEAKGVKTKKIEE 56
KLE +P P + +A+T++D+D D M+ G +E A V ++ EE
Sbjct: 335 KLERLPTPPLDDADASK-TAETNADDDD-DVDMQDGETEEDAAAAARVAAERREE 387
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 531 (192.0 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 113/259 (43%), Positives = 163/259 (62%)
Query: 77 MEENPNAGLQDNDSDVDLEYD--EDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQP 134
++++ + + D+D ++ E + +DG KK K + DH++I Y E +KNFY
Sbjct: 419 LKKSKTSQMIDDDEKLEEESEGEDDGKDKTIKKGK--KEMLHTDHTSIKYAEFQKNFYIE 476
Query: 135 HEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQ 194
+A +T E + R++ G+ ++G D P P+ S+ G E + L+K +Y PT IQ
Sbjct: 477 VPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQ 536
Query: 195 AQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQ 254
AQ +PA ++GRD+IG+A+TGSGKT AF+ PM HI+ Q + PG+G + LI++PTREL+
Sbjct: 537 AQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELAL 596
Query: 255 QIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV---KMGATK 311
QI+ E K+F K L C YGG S +Q L+ GA+IVV TPGR+ID++ T
Sbjct: 597 QIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITN 656
Query: 312 LNRVTFLVLDEADRMFDMG 330
L RVTFLVLDEADRMFDMG
Sbjct: 657 LRRVTFLVLDEADRMFDMG 675
Score = 72 (30.4 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 21 SADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKI 54
S + D D DPLDA+M+ ++KE K KT ++
Sbjct: 394 SIEEDDDIDPLDAYMENLNKEANLNLKKSKTSQM 427
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 567 (204.7 bits), Expect = 4.0e-54, P = 4.0e-54
Identities = 137/328 (41%), Positives = 185/328 (56%)
Query: 14 SYKGNNASADTDSDEDPLDAFMKG-IDKEVKQEAK----GVKTKKIEEVKGIRXXXXXXX 68
S G + +AD D + DPLDAFM + EV++ + G+ K+ K
Sbjct: 238 SENGGDRAADED-EIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNG-KETGDQAKKGF 295
Query: 69 XXXSYYRYME-ENPNAGLQDNDSDVDLEYDEDGNPIAP--KKSKYIDPLPPIDHSTIVYE 125
+ R ++ E+ ++ + SD D DED KK+K + L +DHS I YE
Sbjct: 296 NKAALGRIIQGEDSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTK-AEKLSLVDHSKIEYE 354
Query: 126 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 185
KNFY +DI+R+T R + + V G D P P+ + G ++ L+K
Sbjct: 355 PFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKL 414
Query: 186 EYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLI 245
Y P PIQAQA+P +SGRD IGVAKTGSGKT F+ PML HI DQ +E GDGP+GL+
Sbjct: 415 NYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 474
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QQIY++ ++F K + V YGG Q L+ G EIVV TPGR+ID++
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 534
Query: 306 KMGA---TKLNRVTFLVLDEADRMFDMG 330
+ T L RVT+LV+DEADRMFDMG
Sbjct: 535 CTSSGKITNLRRVTYLVMDEADRMFDMG 562
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 122/252 (48%), Positives = 151/252 (59%)
Query: 84 GLQDNDSDVDLE-YDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEV---EKNFYQPHEDIA 139
G D D D D + G P K K+ +P + E+ EKNFY H ++A
Sbjct: 5 GFGDRDRDRDRGGFGARGGSGLPPK-KFGNPGERLRKKKWDLSELPKFEKNFYVEHPEVA 63
Query: 140 RLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 198
RLTP E ELR K ITV G D P PV +F H F + +M L +T PTPIQ Q
Sbjct: 64 RLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGF 123
Query: 199 PAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYN 258
P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+LAPTREL+QQ+
Sbjct: 124 PLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 259 EAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFL 318
A +GK L C YGG K Q + LE G EI + TPGR+ID ++ G T L R T+L
Sbjct: 184 VADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYL 243
Query: 319 VLDEADRMFDMG 330
VLDEADRM DMG
Sbjct: 244 VLDEADRMLDMG 255
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 171
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 232 SGKTNLRRCTYLVLDEADRMLDMG 255
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 171
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 232 SGKTNLRRCTYLVLDEADRMLDMG 255
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 133 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 192
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 252
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 253 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 312
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 313 SGKTNLRRCTYLVLDEADRMLDMG 336
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 52 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 111
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 171
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 232 SGKTNLRRCTYLVLDEADRMLDMG 255
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 131 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 190
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 250
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 311 SGKTNLRRCTYLVLDEADRMLDMG 334
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 131 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 190
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 250
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 311 SGKTNLRRCTYLVLDEADRMLDMG 334
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 111/204 (54%), Positives = 135/204 (66%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCE 186
EKNFY H ++ARLTP E ELR K ITV G D P PV +F H F + +M L
Sbjct: 133 EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQH 192
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+T PTPIQ Q P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+L
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 252
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL+QQ+ A +GK L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 253 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 312
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 313 SGKTNLRRCTYLVLDEADRMLDMG 336
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 560 (202.2 bits), Expect = 4.7e-53, P = 4.7e-53
Identities = 130/332 (39%), Positives = 189/332 (56%)
Query: 6 YIPAPGSPSYKGN-NASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTK-KIEEVKGIRXX 63
++ A P + A+ + + DPLDA+M+ ++ E+++ V K + V +
Sbjct: 350 HVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGV 409
Query: 64 XXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDED-GNPIAPKKSKYIDPLPPIDHSTI 122
+E+N ++ L+ + D +LE D +A K K L IDHS++
Sbjct: 410 AKKKTTTLKKGEVIEQNMDS-LEYSSED-ELEDIRDTAVNLAMKHRK---ELAKIDHSSV 464
Query: 123 VYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKA 181
Y KNFY ++ R+T + ++ R+ GI V G P P+ ++ G + M+
Sbjct: 465 TYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEV 524
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGP 241
LR+ + PTPIQ QA+PA +SGRD+IG+AKTGSGKT AFI PM HI+DQ +E GDG
Sbjct: 525 LRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA 584
Query: 242 MGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRI 301
+ +I+APTREL QI + ++F K L VC YGG +Q L+ GAEI+V TPGR+
Sbjct: 585 IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRM 644
Query: 302 IDMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
IDM+ + T L RVT++VLDEADRMFDMG
Sbjct: 645 IDMLAANSGRVTNLRRVTYVVLDEADRMFDMG 676
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 116/235 (49%), Positives = 148/235 (62%)
Query: 100 GNPIAPKKSKYIDPLPPIDHSTIVYEEV---EKNFYQPHEDIARLTPQEAQELRAKSGIT 156
G P+ PKK + +P + E+ EKNFY H ++ARLTP E +ELR K IT
Sbjct: 21 GGPLPPKK--FGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKKEIT 78
Query: 157 VSGADP-PYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGS 215
+ G + P PV +F F + +M AL +T PTPIQ Q P ALSGRD++G+A+TGS
Sbjct: 79 IRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGS 138
Query: 216 GKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCY 275
GKT A++ P +VHI Q LE GDGP+ L+LAPTREL+QQ+ A +GK L C Y
Sbjct: 139 GKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIY 198
Query: 276 GGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GG K Q + LE G EI + TPGR+ID ++ G T L R T+LVLDEADRM DMG
Sbjct: 199 GGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 253
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 556 (200.8 bits), Expect = 1.1e-52, P = 1.1e-52
Identities = 132/331 (39%), Positives = 186/331 (56%)
Query: 14 SYKGNNASADTDSDEDPLDAFMKG-IDKEVKQEAKGVKTKKIEE------VKGIRXXXX- 65
S G + + D + + DPLDAFM + EV++ G + + + G
Sbjct: 367 SESGGDGAVD-EEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRP 425
Query: 66 XXXXXXSYYRYME-ENPNAGLQD--NDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI 122
+ R ++ E+ ++ + ND D L+ D++ KK+K + L +DHS I
Sbjct: 426 KKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTK-AEKLSLVDHSKI 484
Query: 123 VYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKAL 182
YE KNFY +DI+R+T +E R + + V G D P P+ + G ++ +
Sbjct: 485 EYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTM 544
Query: 183 RKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPM 242
+K Y P PIQ QA+P +SGRD IGVAKTGSGKT F+ PML HI DQ +E GDGP+
Sbjct: 545 KKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPI 604
Query: 243 GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRII 302
GL++APTREL QQI+++ ++F K + V YGG Q L+ G EIVV TPGR+I
Sbjct: 605 GLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI 664
Query: 303 DMVKMGA---TKLNRVTFLVLDEADRMFDMG 330
D++ + T L RVTFLV+DEADRMFDMG
Sbjct: 665 DILCTSSGKITNLRRVTFLVMDEADRMFDMG 695
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 103/203 (50%), Positives = 133/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ + D+AR + QE + R ITV G D P P+ F F + +M + K +
Sbjct: 57 EKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNW 116
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PTPIQAQ P ALSG+D++G+A+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 117 TDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLA 176
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A +GK + C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 177 PTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEA 236
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 237 GKTNLRRCTYLVLDEADRMLDMG 259
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 532 (192.3 bits), Expect = 5.9e-51, P = 5.9e-51
Identities = 110/217 (50%), Positives = 138/217 (63%)
Query: 114 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 173
L PI EKNFY H D+++ T +E ++ RA +TV G + P P+ F
Sbjct: 331 LSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAP 390
Query: 174 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK 233
F LMK + + +PTPIQ+QA P AL GRDIIG+AKTGSGKT AF+ P +VHI Q
Sbjct: 391 FPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQP 450
Query: 234 ELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEI 293
L DGP+ L+LAPTREL+ QI E +FG +S C YGG SK Q AL+ G EI
Sbjct: 451 VLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEI 510
Query: 294 VVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V+ TPGR+ID+++ G T L RVT+LVLDEADRM DMG
Sbjct: 511 VIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMG 547
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 120/305 (39%), Positives = 171/305 (56%)
Query: 10 PGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQ-EAKGVKTKKIEEVKGIRXXXXXXX 68
P +GN + + DPLDA+M+ + +EVK+ + VK E K
Sbjct: 162 PAEAEKEGNEMEGE---ELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVT 218
Query: 69 XXXSYYRYMEENPNAG-LQDNDSDVDLEYDEDGNPIAPK------KSKYIDPLPPIDHST 121
+ ++ + G L +ND D +EY + + + ++K L P+DH
Sbjct: 219 VVTTKKAVVDSDKKKGELMENDQDA-MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK 277
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMK 180
I YE KNFY ++A+++ +E R + GITV G P P+ S+ G ++
Sbjct: 278 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 337
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDG 240
+L+K Y PTPIQ QA+PA +SGRD+IG+AKTGSGKT AF+ PM HIMDQ+ LE G+G
Sbjct: 338 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 397
Query: 241 PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGR 300
P+ +I+ PTREL+ QI E K+F K L VVC YGG +Q L+ GAEI+V TPGR
Sbjct: 398 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 457
Query: 301 IIDMV 305
+IDM+
Sbjct: 458 MIDML 462
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 111/234 (47%), Positives = 146/234 (62%)
Query: 97 DEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGIT 156
D DGN +P+K +D L P EKNFY +A +T E +E R IT
Sbjct: 41 DNDGNE-SPRKLD-LDGLTPF----------EKNFYVESPAVAAMTDTEVEEYRKLREIT 88
Query: 157 VSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSG 216
V G D P PV SF GF + +++ ++K +T PTPIQ+Q P A+ GRD+IG+A+TGSG
Sbjct: 89 VEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSG 148
Query: 217 KTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYG 276
KT +++ P +VH+ Q L GDGP+ L+LAPTREL+ QI EA +FG + C YG
Sbjct: 149 KTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYG 208
Query: 277 GGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G K Q + L+ G EIV+ TPGR+IDM++ T L RVT+LVLDEADRM DMG
Sbjct: 209 GVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMG 262
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 109/224 (48%), Positives = 145/224 (64%)
Query: 108 SKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITV-SGADPPYPV 166
+ Y L PID TI EKNFY+ HEDI++L+ +E +E+R K IT+ G + P PV
Sbjct: 53 NNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPV 112
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
S GF + ++K+L+ +PTPIQ Q P ALSG+D+IG A+TGSGKT AFI P
Sbjct: 113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 227 VHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
VHI+ Q L+ GDGP+ L+LAPTREL++QI E +F + C YGG K Q A
Sbjct: 173 VHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYA 232
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G I++ PGR+ID+++ T L RVT+LVLDEAD+M DMG
Sbjct: 233 LKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMG 276
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 109/224 (48%), Positives = 145/224 (64%)
Query: 108 SKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITV-SGADPPYPV 166
+ Y L PID TI EKNFY+ HEDI++L+ +E +E+R K IT+ G + P PV
Sbjct: 53 NNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPV 112
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
S GF + ++K+L+ +PTPIQ Q P ALSG+D+IG A+TGSGKT AFI P
Sbjct: 113 VSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAF 172
Query: 227 VHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
VHI+ Q L+ GDGP+ L+LAPTREL++QI E +F + C YGG K Q A
Sbjct: 173 VHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYA 232
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G I++ PGR+ID+++ T L RVT+LVLDEAD+M DMG
Sbjct: 233 LKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMG 276
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 99/203 (48%), Positives = 137/203 (67%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFY H D+A + ++ ++ R ++ +TV G D P+P+++F GF + +++ ++ +
Sbjct: 88 EKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGF 147
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
PTPIQ Q P ALSGRD+IG+A TGSGKT ++ P +VHI Q +L+ GDGP+ L+LA
Sbjct: 148 PKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLA 207
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+ QI E +FGK + C YGG K Q + L G EI + TPGR+IDM++
Sbjct: 208 PTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEA 267
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L RVT+LVLDEADRM DMG
Sbjct: 268 GKTNLKRVTYLVLDEADRMLDMG 290
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 103/218 (47%), Positives = 138/218 (63%)
Query: 113 PLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHF 172
P+ P+D S + +KNFYQ H ++A +P E Q R + ITV G P P+ F
Sbjct: 230 PMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEV 286
Query: 173 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ 232
+ +MK +R+ Y +PT IQAQ P A+SG + +G+AKTGSGKT +I P +VHI +Q
Sbjct: 287 HLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ 346
Query: 233 KELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAE 292
+ L+ GDGP+ L+LAPTREL+QQI A FG + C +GG K Q + L+ G E
Sbjct: 347 QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCE 406
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
IV+ TPGR+ID + G+T L R T+LVLDEADRM DMG
Sbjct: 407 IVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG 444
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 523 (189.2 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 130/328 (39%), Positives = 179/328 (54%)
Query: 9 APGSPSYKGNNASADTDSDE-DPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXX 67
A P + D DE DPLDAFM ++ + + G +K ++ + +
Sbjct: 235 AQAKPQTDSMDVDTKEDDDEVDPLDAFMA----DLTEPSFGPASKPVKTLSSAKVLPTPE 290
Query: 68 XXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEV 127
Y ++ G + VD + +A K+ K +P ID+S + V
Sbjct: 291 A-------YFSDDDEFGASTKEG-VDAKAIM---AMAAKRKK--KEIPTIDYSKLDIVPV 337
Query: 128 EKNFY-QPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFGFDEVLMKALRKC 185
KNF+ +P+E ++ +T E ELR + GI VSG D P PV + G ++ + K
Sbjct: 338 RKNFWVEPYE-LSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKL 396
Query: 186 EYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLI 245
EY PT IQ QA+P +SGRD++GVAKTGSGKT AF+ PM HI DQ+ ++ +GP+GLI
Sbjct: 397 EYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLI 456
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
L PTREL+ QI+ + K F K L VC YGG DQ L+ GAEIVV T GR+ID++
Sbjct: 457 LTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLL 516
Query: 306 --KMG-ATKLNRVTFLVLDEADRMFDMG 330
G L R T++VLDEADRMFDMG
Sbjct: 517 AANQGRVVSLRRTTYIVLDEADRMFDMG 544
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 100/203 (49%), Positives = 133/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+ R T QE ++ R+ +TV G + P P+ +F F +M+ +++ +
Sbjct: 43 EKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNF 102
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 103 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 162
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 163 PTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEA 222
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 223 GKTNLRRCTYLVLDEADRMLDMG 245
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 100/203 (49%), Positives = 133/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+ R T QE ++ R+ +TV G + P P+ +F F +M+ +++ +
Sbjct: 51 EKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNF 110
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 111 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 170
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 171 PTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEA 230
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 231 GKTNLRRCTYLVLDEADRMLDMG 253
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 100/203 (49%), Positives = 132/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EK+FY+ H D+ + +E E R K +TV G D P PV +F GF + ++ ++ +
Sbjct: 101 EKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGF 160
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
PT IQ+Q P ALSGRD++G+A+TGSGKT ++ P +VHI Q L PGDGP+ LILA
Sbjct: 161 EKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILA 220
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+ QI E +FGK + C YGG K Q + L G E+ + TPGR+IDM++
Sbjct: 221 PTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEA 280
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L RVT+LVLDEADRM DMG
Sbjct: 281 GRTNLRRVTYLVLDEADRMLDMG 303
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 112 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 171
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 172 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 231
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 232 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 291
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 292 GKTNLRRTTYLVLDEADRMLDMG 314
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/203 (50%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/203 (50%), Positives = 129/203 (63%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/203 (50%), Positives = 129/203 (63%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G EI + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 510 (184.6 bits), Expect = 2.5e-48, P = 2.5e-48
Identities = 103/217 (47%), Positives = 135/217 (62%)
Query: 114 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 173
LP I S + KNFY+P + + T E + + IT+ G P P F G
Sbjct: 104 LPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGG 163
Query: 174 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK 233
F + +M +RK + PT IQAQ P A+SGRD++GVA+TGSGKT A++ P +VHI +Q
Sbjct: 164 FPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQP 223
Query: 234 ELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEI 293
LE GDGP+ L+LAPTREL+QQI A FG ++ C +GG K Q++ LE G EI
Sbjct: 224 RLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEI 283
Query: 294 VVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V+ TPGR+ID ++ G T L R T+LVLDEADRM DMG
Sbjct: 284 VIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG 320
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 99/203 (48%), Positives = 133/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFY + ++ ++ + +E R K ITV G+ P PV++F F + +M L + +
Sbjct: 56 EKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNF 115
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
PT IQAQ P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ L+LA
Sbjct: 116 KEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLA 175
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A +GK + C YGG K Q + LE G EI + TPGR+ID +++
Sbjct: 176 PTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEV 235
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 236 GKTNLRRCTYLVLDEADRMLDMG 258
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 98/203 (48%), Positives = 130/203 (64%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EK+FY+ H D+ + E + R + + V G+D P PV +F GF +M ++ +
Sbjct: 86 EKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGF 145
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
+PT IQ+Q P ALSGRD++G+A+TGSGKT + P +VHI Q L PGDGP+ LILA
Sbjct: 146 PAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILA 205
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+ QI E +FGK + C YGG K Q + L G E+ + TPGR+IDM++
Sbjct: 206 PTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLES 265
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L RVT+LVLDEADRM DMG
Sbjct: 266 GKTNLRRVTYLVLDEADRMLDMG 288
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 102/203 (50%), Positives = 129/203 (63%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+QQ+ A + + L C YGG K Q + LE G E + TPGR+ID ++
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPGRLIDFLEC 234
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L R T+LVLDEADRM DMG
Sbjct: 235 GKTNLRRTTYLVLDEADRMLDMG 257
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 98/203 (48%), Positives = 133/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFY HE + + E + R ++ +T+SG D P P+++F GF + ++ ++ +
Sbjct: 74 EKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGF 133
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
PT IQ Q P ALSGRD++G+A TGSGKT ++ P +VHI Q L PGDGP+ L+LA
Sbjct: 134 DKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLA 193
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+ QI E +FG + C YGG K Q + L G+EIV+ TPGR+IDM+++
Sbjct: 194 PTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEI 253
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
G T L RVT+LVLDEADRM DMG
Sbjct: 254 GKTNLKRVTYLVLDEADRMLDMG 276
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 103/217 (47%), Positives = 136/217 (62%)
Query: 114 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 173
LP + +V+ EKNFY + +T Q+ R + I+V G D P P+ F
Sbjct: 114 LPKQNFGNLVH--FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDAN 171
Query: 174 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK 233
F + +++A+ K +T PTPIQAQ P AL GRD+IG+A+TGSGKT A++ P LVH+ Q
Sbjct: 172 FPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP 231
Query: 234 ELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEI 293
L DGP+ LILAPTREL+ QI E+++FG + C YGG K Q + L G EI
Sbjct: 232 RLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEI 291
Query: 294 VVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V+ TPGR+IDM++ T L RVT+LVLDEADRM DMG
Sbjct: 292 VIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG 328
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 497 (180.0 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 131/342 (38%), Positives = 186/342 (54%)
Query: 3 KLEYIPAPGSPSYKGNNASA-DTDSD-EDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGI 60
K + P PS + + S D + ED LD F+ I +E E K TK + ++ I
Sbjct: 135 KNSHRPVFKKPSLEYDEISEHQNDKESEDELDVFLASI-RE--SELKSDNTKAEKAIESI 191
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDG---NPIAPKKSKYIDP---L 114
+EN + G D D + E DE+ + I+ K +K + L
Sbjct: 192 PEGDVENE---------KENDDYG---GDGDEEDESDEESRLQDLISTKLTKLQNKGKEL 239
Query: 115 PPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFG 173
IDHS Y+E K FY+ +++ L+ ++ + +R I V G D P P+ + H
Sbjct: 240 QSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLA 299
Query: 174 FDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ 232
L + K ++ P+ IQ+QA+P LSGRD+IG+AKTGSGKT +++ PML HI DQ
Sbjct: 300 LPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ 359
Query: 233 KELEPGDGPMGLILAPTRELSQQIYNEAKRFGK-GYNLSVVCCYGGGSKWDQSKALELGA 291
+ + GP+GLIL+PTREL+ QI E F K NL V CCYGG S +Q L+ G
Sbjct: 360 QFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGV 419
Query: 292 EIVVGTPGRIIDMVKMGATK---LNRVTFLVLDEADRMFDMG 330
EI+VGTPGR+ID++ + + L R TF+VLDEADRMFD+G
Sbjct: 420 EIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLG 461
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 497 (180.0 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 131/342 (38%), Positives = 186/342 (54%)
Query: 3 KLEYIPAPGSPSYKGNNASA-DTDSD-EDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGI 60
K + P PS + + S D + ED LD F+ I +E E K TK + ++ I
Sbjct: 135 KNSHRPVFKKPSLEYDEISEHQNDKESEDELDVFLASI-RE--SELKSDNTKAEKAIESI 191
Query: 61 RXXXXXXXXXXSYYRYMEENPNAGLQDNDSDVDLEYDEDG---NPIAPKKSKYIDP---L 114
+EN + G D D + E DE+ + I+ K +K + L
Sbjct: 192 PEGDVENE---------KENDDYG---GDGDEEDESDEESRLQDLISTKLTKLQNKGKEL 239
Query: 115 PPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK-SGITVSGADPPYPVSSFGHFG 173
IDHS Y+E K FY+ +++ L+ ++ + +R I V G D P P+ + H
Sbjct: 240 QSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLA 299
Query: 174 FDEVLMKALR-KCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ 232
L + K ++ P+ IQ+QA+P LSGRD+IG+AKTGSGKT +++ PML HI DQ
Sbjct: 300 LPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ 359
Query: 233 KELEPGDGPMGLILAPTRELSQQIYNEAKRFGK-GYNLSVVCCYGGGSKWDQSKALELGA 291
+ + GP+GLIL+PTREL+ QI E F K NL V CCYGG S +Q L+ G
Sbjct: 360 QFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGV 419
Query: 292 EIVVGTPGRIIDMVKMGATK---LNRVTFLVLDEADRMFDMG 330
EI+VGTPGR+ID++ + + L R TF+VLDEADRMFD+G
Sbjct: 420 EIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLG 461
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 95/203 (46%), Positives = 132/203 (65%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
+K+FY+ HE++ + E E R + I V G + P PV++F GF ++K +++ +
Sbjct: 83 QKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGF 142
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
+PTPIQ QA P A+SGRD++G++ TGSGKT ++ P +VHI Q L PGDGP+ L+LA
Sbjct: 143 EAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLA 202
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKM 307
PTREL+ QI E +FGK + C YGG + Q + L G EI + TPGR++DM+
Sbjct: 203 PTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDS 262
Query: 308 GATKLNRVTFLVLDEADRMFDMG 330
T L RVT+LVLDEADRM DMG
Sbjct: 263 NKTNLRRVTYLVLDEADRMLDMG 285
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 447 (162.4 bits), Expect = 5.7e-45, Sum P(2) = 5.7e-45
Identities = 102/248 (41%), Positives = 148/248 (59%)
Query: 91 DVDLEYDEDGNPIAP-KKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQEL 149
D D+E + D + IA K K + I +S E +KNFY E ++ ++ E +EL
Sbjct: 177 DEDVEDNTDNSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEEL 236
Query: 150 RAK-SGITVSGADPPYPVSSFGHFGFD-EVLMKALRKCEYTSPTPIQAQAVPAALSGRDI 207
R I + G P PV+ + G + ++ K + S TPIQ+QA+PA +SGRD+
Sbjct: 237 RLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDV 296
Query: 208 IGVAKTGSGKTGAFIWPMLVHIMDQKELEPGD-GPMGLILAPTRELSQQIYNEAKRFGKG 266
IG++KTGSGKT +++ P+L + Q+ L + GPMGLILAPTREL+ QI+ E +F +
Sbjct: 297 IGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEA 356
Query: 267 -YNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKL---NRVTFLVLDE 322
++ VCC GG Q L+ G EIVV TPGR ID++ + KL R+TF+V+DE
Sbjct: 357 DTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDE 416
Query: 323 ADRMFDMG 330
ADR+FD+G
Sbjct: 417 ADRLFDLG 424
Score = 59 (25.8 bits), Expect = 5.7e-45, Sum P(2) = 5.7e-45
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 25 DSDEDPLDAFMKGIDKEVKQEAKGV 49
D+++DPLD FM + +E +KG+
Sbjct: 132 DNEKDPLDEFMTSLKEEKMSNSKGM 156
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 474 (171.9 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 113/321 (35%), Positives = 177/321 (55%)
Query: 18 NNASADTDSDEDPLDAFMKGIDKEVKQEAK-GVKTKKIEEVK--GIRXXXXXXXXXXSYY 74
NN + D D D+D D F K +E+K++ + +K + + + + S
Sbjct: 577 NNNNDDDDDDDDDDDVFHKLFVEELKKKTEEDMKRNEKDNMNESNLTDSKNKKQNKGSDA 636
Query: 75 RYME-ENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQ 133
+ ++ + L N S+ L Y+E+G KK L ++H I Y ++KN Y
Sbjct: 637 SFSSSDDTDDKLSSNKSE--LNYEENGMKKMNKK------LLEVNHDEIDYIPIKKNIYV 688
Query: 134 PHEDIARLTPQEAQELRAKSG-ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++I + + R +G I V G + P PV F G +++ L K +
Sbjct: 689 QVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYN 748
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTREL 252
IQ Q +PA + GRD+I +A+TGSGKT ++++P++ H++ Q+ L DGP+ +IL PTREL
Sbjct: 749 IQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTREL 808
Query: 253 SQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMG---A 309
S Q+ NEAK + K N+ ++ YGG + Q K L+ G EI+VGTPGRIID++ +
Sbjct: 809 SIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKV 868
Query: 310 TKLNRVTFLVLDEADRMFDMG 330
T LNRV+F+VLDEADR+ D+G
Sbjct: 869 TNLNRVSFVVLDEADRLLDLG 889
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 474 (171.9 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 113/321 (35%), Positives = 177/321 (55%)
Query: 18 NNASADTDSDEDPLDAFMKGIDKEVKQEAK-GVKTKKIEEVK--GIRXXXXXXXXXXSYY 74
NN + D D D+D D F K +E+K++ + +K + + + + S
Sbjct: 577 NNNNDDDDDDDDDDDVFHKLFVEELKKKTEEDMKRNEKDNMNESNLTDSKNKKQNKGSDA 636
Query: 75 RYME-ENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQ 133
+ ++ + L N S+ L Y+E+G KK L ++H I Y ++KN Y
Sbjct: 637 SFSSSDDTDDKLSSNKSE--LNYEENGMKKMNKK------LLEVNHDEIDYIPIKKNIYV 688
Query: 134 PHEDIARLTPQEAQELRAKSG-ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++I + + R +G I V G + P PV F G +++ L K +
Sbjct: 689 QVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYN 748
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTREL 252
IQ Q +PA + GRD+I +A+TGSGKT ++++P++ H++ Q+ L DGP+ +IL PTREL
Sbjct: 749 IQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTREL 808
Query: 253 SQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMG---A 309
S Q+ NEAK + K N+ ++ YGG + Q K L+ G EI+VGTPGRIID++ +
Sbjct: 809 SIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKV 868
Query: 310 TKLNRVTFLVLDEADRMFDMG 330
T LNRV+F+VLDEADR+ D+G
Sbjct: 869 TNLNRVSFVVLDEADRLLDLG 889
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 452 (164.2 bits), Expect = 9.3e-42, P = 9.3e-42
Identities = 90/204 (44%), Positives = 134/204 (65%)
Query: 129 KNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYT 188
K+FY H + + Q+ E+R + ITVSG + P+PV SF +++ +++ +T
Sbjct: 199 KDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFT 258
Query: 189 SPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAP 248
PT IQ+Q P ALSGRD++G+A+TGSGKT A++ P +VHI +Q + G+GP+ L+LAP
Sbjct: 259 KPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAP 318
Query: 249 TRELSQQIYNEAKRFGKGYNLSV--VCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
TREL+QQI + + +G + C +GG SK Q++ L+ G E+++ TPGR+ID ++
Sbjct: 319 TRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLE 378
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
T L R T+LVLDEADRM DMG
Sbjct: 379 NRNTNLQRCTYLVLDEADRMLDMG 402
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 437 (158.9 bits), Expect = 6.3e-41, P = 6.3e-41
Identities = 110/253 (43%), Positives = 138/253 (54%)
Query: 84 GLQDNDSDVDLE-YDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEV---EKNFYQPHEDIA 139
G D D D D + G P K K+ +P + E+ EKNFY H ++A
Sbjct: 5 GFGDRDRDRDRGGFGARGGSGLPPK-KFGNPGERLRKKKWDLSELPKFEKNFYVEHPEVA 63
Query: 140 RLTPQEAQELRAKSGITVSGADP-PYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 198
RLTP E ELR K ITV G D P PV +F H F + +M L +T PTPIQ Q
Sbjct: 64 RLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGF 123
Query: 199 PAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYN 258
P ALSGRD++G+A+TGSGKT A++ P +VHI Q LE GDGP+ +L P +Y
Sbjct: 124 PLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIVSVL-PFFSTLFSVYR 182
Query: 259 EAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTF 317
F K +L VC G K + + L EI + TPGRI D ++ G T L R T+
Sbjct: 183 GGTDFKFKCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGRI-DFLESGKTNLRRCTY 241
Query: 318 LVLDEADRMFDMG 330
LVLDEADRM DMG
Sbjct: 242 LVLDEADRMLDMG 254
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 89/217 (41%), Positives = 127/217 (58%)
Query: 114 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFG 173
L +D S +EK+FY + ++R E + + + +T+ G P PV F
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 174 FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK 233
+ + L ++ PT IQ+ + P A+SGRDII +AKTGSGKT AF+ P LVHI Q
Sbjct: 137 LPGQIHELLYG-KFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 234 ELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEI 293
+ G+GP L+L PTREL+QQ+ + F L + C +GG SK Q++ LE G +I
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDI 255
Query: 294 VVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
VV TPGR++D + G T + + ++LVLDEADRM DMG
Sbjct: 256 VVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMG 292
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 411 (149.7 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 95/254 (37%), Positives = 143/254 (56%)
Query: 80 NPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIA 139
+PN D + EY+ I K+ +YI P +++ I+ + EK++ Q +
Sbjct: 617 HPNEPSSDKHPNTS-EYNYHNYLIKNKRGEYIYE-PKVNN--IIKDVCEKHWSQKSRE-- 670
Query: 140 RLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVP 199
+T ++ + R + I + G P P+ + L+KA++K +Y PTPIQ QA+P
Sbjct: 671 EMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIP 730
Query: 200 AALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKEL--EPG-DGPMGLILAPTRELSQQI 256
AL RD+IG+A+TGSGKT AF+ PML ++ L E DGP L++AP+REL+ QI
Sbjct: 731 IALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQI 790
Query: 257 YNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVT 316
Y E +F + V GG + Q+ L G EIV+GTPGR+ D ++ T LN+
Sbjct: 791 YEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCN 850
Query: 317 FLVLDEADRMFDMG 330
+++LDEADRM DMG
Sbjct: 851 YVILDEADRMMDMG 864
Score = 41 (19.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 78 EENPNAGLQDNDSDVDLEYDEDGN 101
++N N DN+ D D + ++D N
Sbjct: 60 DDNDNNDDNDNNDDNDDDNNDDNN 83
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 411 (149.7 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 95/254 (37%), Positives = 143/254 (56%)
Query: 80 NPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIA 139
+PN D + EY+ I K+ +YI P +++ I+ + EK++ Q +
Sbjct: 617 HPNEPSSDKHPNTS-EYNYHNYLIKNKRGEYIYE-PKVNN--IIKDVCEKHWSQKSRE-- 670
Query: 140 RLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVP 199
+T ++ + R + I + G P P+ + L+KA++K +Y PTPIQ QA+P
Sbjct: 671 EMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIP 730
Query: 200 AALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKEL--EPG-DGPMGLILAPTRELSQQI 256
AL RD+IG+A+TGSGKT AF+ PML ++ L E DGP L++AP+REL+ QI
Sbjct: 731 IALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQI 790
Query: 257 YNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVT 316
Y E +F + V GG + Q+ L G EIV+GTPGR+ D ++ T LN+
Sbjct: 791 YEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCN 850
Query: 317 FLVLDEADRMFDMG 330
+++LDEADRM DMG
Sbjct: 851 YVILDEADRMMDMG 864
Score = 41 (19.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 78 EENPNAGLQDNDSDVDLEYDEDGN 101
++N N DN+ D D + ++D N
Sbjct: 60 DDNDNNDDNDNNDDNDDDNNDDNN 83
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 413 (150.4 bits), Expect = 2.2e-38, P = 2.2e-38
Identities = 88/192 (45%), Positives = 124/192 (64%)
Query: 139 ARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 198
+ L+P EA R + ITVSG P P+ SF GF L++ + +++PTPIQAQ+
Sbjct: 133 SELSP-EAYSRRHE--ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSW 189
Query: 199 PAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYN 258
P A+ GRDI+ +AKTGSGKT ++ P +H+ + + GP L+L+PTREL+ QI
Sbjct: 190 PIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRN-DSRMGPTILVLSPTRELATQIQE 248
Query: 259 EAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFL 318
EA +FG+ +S C YGG K Q + LE GA+IVV TPGR+ D+++M L ++++L
Sbjct: 249 EAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYL 308
Query: 319 VLDEADRMFDMG 330
VLDEADRM DMG
Sbjct: 309 VLDEADRMLDMG 320
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 416 (151.5 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 81/199 (40%), Positives = 127/199 (63%)
Query: 136 EDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 195
++++ ++ ++ + R I++ G P P+ ++ GF + + +A+++ Y PTPIQ
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQR 329
Query: 196 QAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGD----GPMGLILAPTRE 251
QA+P L RD+IGVA+TGSGKT AF+ P+LV I ++E + GP +I+APTRE
Sbjct: 330 QAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRE 389
Query: 252 LSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATK 311
L+QQI E +FGK + V GG S+ DQ L +G E+V+ TPGR++D+++
Sbjct: 390 LAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLL 449
Query: 312 LNRVTFLVLDEADRMFDMG 330
LN+ T+++LDEADRM DMG
Sbjct: 450 LNQCTYVILDEADRMLDMG 468
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 416 (151.5 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 88/194 (45%), Positives = 120/194 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ ++ + +++ + KC Y PTPIQ QA+P
Sbjct: 352 MTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPI 411
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKEL---EPGD-GPMGLILAPTRELSQQI 256
L RDIIGVA+TGSGKT AF+ P+LV I ++ E D GP +ILAPTREL+QQI
Sbjct: 412 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQI 471
Query: 257 YNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVT 316
E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R T
Sbjct: 472 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 531
Query: 317 FLVLDEADRMFDMG 330
++VLDEADRM DMG
Sbjct: 532 YVVLDEADRMIDMG 545
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 403 (146.9 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 87/194 (44%), Positives = 120/194 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R +T+ G P P+ S+ GF + ++ + K Y PTPIQ QA+P
Sbjct: 368 MTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPI 427
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ---KELEPGD-GPMGLILAPTRELSQQI 256
L RDIIGVA+TGSGKT AF+ P+L I + LE D GP +I+APTREL+QQI
Sbjct: 428 GLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQI 487
Query: 257 YNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVT 316
E +FG+ + V GG S+ +Q L LG EIV+ TPGR+ID+++ LN+ T
Sbjct: 488 EEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCT 547
Query: 317 FLVLDEADRMFDMG 330
++VLDEADRM DMG
Sbjct: 548 YIVLDEADRMIDMG 561
Score = 38 (18.4 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 8 PAPGSPSYKGNNASADTDSDE-DPLDAFMKGIDKEVKQEAKGVKTKKIEEVK 58
PA +P K + D D +D +G DK + K K++E ++
Sbjct: 203 PAIVAPPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIR 254
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 412 (150.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 90/195 (46%), Positives = 120/195 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELEPGDGPMGLILAPTRELSQQ 255
L RDIIGVA+TGSGKT AF+ P+LV I +D+ E E GP +ILAPTREL+QQ
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE-ESDQGPYAIILAPTRELAQQ 482
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRV 315
I E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R
Sbjct: 483 IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 542
Query: 316 TFLVLDEADRMFDMG 330
T++VLDEADRM DMG
Sbjct: 543 TYVVLDEADRMIDMG 557
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 412 (150.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 90/195 (46%), Positives = 120/195 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELEPGDGPMGLILAPTRELSQQ 255
L RDIIGVA+TGSGKT AF+ P+LV I +D+ E E GP +ILAPTREL+QQ
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE-ESDQGPYAIILAPTRELAQQ 483
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRV 315
I E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R
Sbjct: 484 IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 543
Query: 316 TFLVLDEADRMFDMG 330
T++VLDEADRM DMG
Sbjct: 544 TYVVLDEADRMIDMG 558
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 412 (150.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 90/195 (46%), Positives = 120/195 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELEPGDGPMGLILAPTRELSQQ 255
L RDIIGVA+TGSGKT AF+ P+LV I +D+ E E GP +ILAPTREL+QQ
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE-ESDQGPYAIILAPTRELAQQ 483
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRV 315
I E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R
Sbjct: 484 IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 543
Query: 316 TFLVLDEADRMFDMG 330
T++VLDEADRM DMG
Sbjct: 544 TYVVLDEADRMIDMG 558
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 412 (150.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 90/195 (46%), Positives = 120/195 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELEPGDGPMGLILAPTRELSQQ 255
L RDIIGVA+TGSGKT AF+ P+LV I +D+ E E GP +ILAPTREL+QQ
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE-ESDQGPYAIILAPTRELAQQ 483
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRV 315
I E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R
Sbjct: 484 IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 543
Query: 316 TFLVLDEADRMFDMG 330
T++VLDEADRM DMG
Sbjct: 544 TYVVLDEADRMIDMG 558
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 410 (149.4 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 90/195 (46%), Positives = 120/195 (61%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + R IT G P P+ S+ +++ + KC Y PTPIQ QA+P
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELEPGDGPMGLILAPTRELSQQ 255
L RDIIGVA+TGSGKT AF+ P+LV I +D+ E E GP +ILAPTREL+QQ
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIE-ESDQGPYAIILAPTRELAQQ 483
Query: 256 IYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRV 315
I E +FGK + V GG S+ DQ L +G EIV+ TPGR+ID+++ L+R
Sbjct: 484 IEEETIKFGKPLGIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 543
Query: 316 TFLVLDEADRMFDMG 330
T++VLDEADRM DMG
Sbjct: 544 TYVVLDEADRMIDMG 558
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 408 (148.7 bits), Expect = 6.9e-37, P = 6.9e-37
Identities = 90/206 (43%), Positives = 123/206 (59%)
Query: 129 KNFYQPH----EDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 184
K+ +PH D+ L+P E R + +T +G + P P +F G +++ L
Sbjct: 395 KSLVRPHFVTSPDVPHLSPVEIY--RKQHEVTTTGENIPAPYITFESSGLPPEILRELLS 452
Query: 185 CEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGL 244
+ SPTPIQAQ P AL RDI+ +AKTGSGKT ++ P + + + + +GP L
Sbjct: 453 AGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRN-DSRNGPTVL 511
Query: 245 ILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDM 304
ILAPTREL+ QI +EA RFG+ +S C YGG K Q K LE GA+IVV TPGR+ D+
Sbjct: 512 ILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDI 571
Query: 305 VKMGATKLNRVTFLVLDEADRMFDMG 330
++M +V+ LVLDEADRM DMG
Sbjct: 572 LEMKMIDFQQVSLLVLDEADRMLDMG 597
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 96/220 (43%), Positives = 131/220 (59%)
Query: 127 VEKNFYQ-PHEDIARLTPQEAQELRAKSGITV-------SGADPPYPVSSFGH-FGFDEV 177
+ ++ Y+ P+E L+P++ QEL G+ S P PV+SF FG +
Sbjct: 36 IVRDLYKIPNEQ-KNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSNAS 94
Query: 178 LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-KELE 236
+M +RK + P+PIQ+Q P LSG+D IGV++TGSGKT AF+ P L+HI Q + E
Sbjct: 95 IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYE 154
Query: 237 PGD-----GPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELG 290
D P L+L+PTREL+QQI E K++ GY VC YGGGS+ +Q +A G
Sbjct: 155 KNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKS--VCLYGGGSRPEQVEACRGG 212
Query: 291 AEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
EIV+ TPGR+ D+ G L VT++VLDEADRM DMG
Sbjct: 213 VEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMG 252
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 382 (139.5 bits), Expect = 5.6e-36, Sum P(2) = 5.6e-36
Identities = 84/214 (39%), Positives = 125/214 (58%)
Query: 125 EEVEKNFYQPHEDIARLTPQEAQELRA-KS--GITVSGADPPYPVSSFGHFGFDEVLMKA 181
EE +N H +L ++ R K I G P P+ S+ G + L++
Sbjct: 301 EESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLEL 360
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHI-----MDQKELE 236
+ + Y PTPIQ A+P A+ RD+IGVA TGSGKT AF+ P+L +I +D+ E
Sbjct: 361 VDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWR 420
Query: 237 PGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVG 296
DGP ++LAPTREL+QQI EAK+F + +VV GG S +Q+ +L GAEI++
Sbjct: 421 KNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIA 480
Query: 297 TPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
TPGR++D ++ L++ ++++DEADRM D+G
Sbjct: 481 TPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLG 514
Score = 39 (18.8 bits), Expect = 5.6e-36, Sum P(2) = 5.6e-36
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 315 VTFLVLDEADRMFDM 329
+TFL ++AD M+D+
Sbjct: 722 ITFLGNEDADVMYDL 736
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 378 (138.1 bits), Expect = 8.3e-36, Sum P(2) = 8.3e-36
Identities = 76/193 (39%), Positives = 116/193 (60%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+T ++ + I+ G P P+ ++ +++A+R+ Y P+PIQ Q++P
Sbjct: 387 MTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPI 446
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---GDGPMGLILAPTRELSQQIY 257
+L+GRDI+G+A+TGSGKT AF+ PML++I Q L DGP L++APTREL QQI
Sbjct: 447 SLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIE 506
Query: 258 NEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTF 317
E + F + + VV GG S DQ+ + G EI++ TPGR+ D ++ LN+ +
Sbjct: 507 KETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNY 566
Query: 318 LVLDEADRMFDMG 330
+VLDEAD M D+G
Sbjct: 567 IVLDEADMMIDLG 579
Score = 43 (20.2 bits), Expect = 8.3e-36, Sum P(2) = 8.3e-36
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 29 DPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSYYR---YMEENPNAGL 85
DPL+ F KG +K+E K + ++ + R R Y + G
Sbjct: 61 DPLEFFSKG---GLKEEQKKERDDHRDDYRDSRDRDRDYRDNGGRDRDRDYRDGGGGGGG 117
Query: 86 QDNDSDVDLEYDED 99
+D D + D + D D
Sbjct: 118 RDRDRNRDRDRDRD 131
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 362 (132.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 75/201 (37%), Positives = 114/201 (56%)
Query: 131 FYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSP 190
FY+ H I L ++ + L+ + GI + G P P+ F H GF E L L+ Y P
Sbjct: 173 FYKDHSFILSLQDEQVENLKLQLGIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVP 232
Query: 191 TPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTR 250
TPIQ Q +P L GRDI+ A TGSGKT AF+ P+++ ++++ E P LILAPTR
Sbjct: 233 TPIQMQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKVLNETET-----PSALILAPTR 287
Query: 251 ELSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGA 309
EL+ QI +AK G N+ V GG Q L+ ++++ TPGR++++++ +
Sbjct: 288 ELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSS 347
Query: 310 TKLNRVTFLVLDEADRMFDMG 330
+L+ + +V+DE D M MG
Sbjct: 348 VQLHGIKIVVVDEVDTMLKMG 368
Score = 47 (21.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 7 IPAPGSPSYKGNNASADTDSDEDPLDAFMK 36
+P S KGN +A+ S E+P+ +F K
Sbjct: 74 VPDASSGEDKGN--TAEDSSSEEPVKSFSK 101
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 382 (139.5 bits), Expect = 8.4e-35, P = 8.4e-35
Identities = 77/181 (42%), Positives = 111/181 (61%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
I SG + P PV++F E L +R+C+Y PTP+Q A+P L GRD++ A+TG
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTG 206
Query: 215 SGKTGAFIWPMLVHIMDQKELEPGDG-----PMGLILAPTRELSQQIYNEAKRFGKGYNL 269
SGKT AF +P++ IM + ++ G P+ +IL+PTREL+ QI++EAK+F +
Sbjct: 207 SGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV 266
Query: 270 SVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDM 329
VV YGG Q + LE G +I+V TPGR+ D+++ + + FL LDEADRM DM
Sbjct: 267 KVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 326
Query: 330 G 330
G
Sbjct: 327 G 327
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 382 (139.5 bits), Expect = 9.4e-35, P = 9.4e-35
Identities = 78/181 (43%), Positives = 112/181 (61%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
I SG + P PV++F E L +++C+Y PTP+Q A+P +GRD++ A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 215 SGKTGAFIWPMLVHIMDQKELEPGDG-----PMGLILAPTRELSQQIYNEAKRFGKGYNL 269
SGKT AF +P++ IM + +E G P+ +IL+PTREL+ QI++EA++F +
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGV 253
Query: 270 SVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDM 329
VV YGG Q + LE G +I+V TPGR+ D+++ G L V FL LDEADRM DM
Sbjct: 254 KVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDM 313
Query: 330 G 330
G
Sbjct: 314 G 314
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 376 (137.4 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 76/181 (41%), Positives = 110/181 (60%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ SG D P PV++F + L +R+C+Y PTP+Q A+P L+ RD++ A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 215 SGKTGAFIWPMLVHIMDQKELEPGDG-----PMGLILAPTRELSQQIYNEAKRFGKGYNL 269
SGKT AF +P++ IM + +E G P +IL+PTREL+ QI++EAK+F +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 270 SVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDM 329
VV YGG Q + LE G +I+V TPGR+ D+++ + + FL LDEADRM DM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 330 G 330
G
Sbjct: 319 G 319
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 367 (134.2 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 93/245 (37%), Positives = 132/245 (53%)
Query: 87 DNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEA 146
D S D E + I K SK + S+ ++ E+ + EDI L+P E
Sbjct: 37 DESSSSDSEVESKSKSIK-KSSKSEEKKSEKKSSSSKEDKEEEVKEETKEDIV-LSPTE- 93
Query: 147 QELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRD 206
R K + + G P P F + F + + +T+PT IQ Q+ P L G D
Sbjct: 94 --WRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQG--FTAPTVIQGQSWPIILGGND 149
Query: 207 IIGVAKTGSGKTGAFIWPMLVHIMD-QKELEPGDGPMGLILAPTRELSQQIYNEAKRFGK 265
++G+A TGSGKT AF+ P L+ I+ K G P+ L++APTREL+QQI K +
Sbjct: 150 LVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIR 209
Query: 266 GYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADR 325
G ++ +C YGG K DQS+ L G +IV+GTPGR+ D+++ L+ V +LVLDEADR
Sbjct: 210 GTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADR 267
Query: 326 MFDMG 330
M DMG
Sbjct: 268 MLDMG 272
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 75/156 (48%), Positives = 96/156 (61%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
EKNFYQ H D+AR T QE + R ITV G + P PV +F F +M + + +
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 114
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILA 247
T PT IQAQ P ALSG D++GVA+TGSGKT +++ P +VHI Q LE GDGP+ L+LA
Sbjct: 115 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLA 174
Query: 248 PTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQ 283
PTREL+QQ+ A + + L C YGG K Q
Sbjct: 175 PTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 368 (134.6 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 89/216 (41%), Positives = 129/216 (59%)
Query: 129 KNFYQPHEDIARLTPQEAQELRAKSG-ITVS-------G-ADPPYP--VSSFGH-FGFDE 176
KNFY+ ++A LT E + +R ++ ITVS G PP P V +F F
Sbjct: 233 KNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYP 292
Query: 177 VLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELE 236
+++ + K ++ P+PIQ+QA P L G D+IG+A+TG+GKT AF+ P ++H Q
Sbjct: 293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPR 352
Query: 237 PGDGPMG-LILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIV 294
G L+LAPTREL+ QI E K++ +G + VC YGGG++ Q LE GAEI+
Sbjct: 353 GTRGGANVLVLAPTRELALQIEMEVKKYSFRG--MKAVCVYGGGNRNMQISDLERGAEII 410
Query: 295 VGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ TPGR+ D++ ++ +T+LVLDEADRM DMG
Sbjct: 411 ICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMG 446
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 341 (125.1 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 81/214 (37%), Positives = 123/214 (57%)
Query: 125 EEVEKNFYQ--PHEDIARLTPQEAQELRAKSGITVSGADPP-YP-VSSFGHFGFDEVLMK 180
+E EKN + P + + E + + K +T G + Y + +F E ++
Sbjct: 70 KESEKNKKKDVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLD 129
Query: 181 ALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-KELEPGD 239
+ E P+PIQ+ P L GRD+IG+AKTGSGKT AF P ++H++ + K++ G
Sbjct: 130 CCKTFE--KPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGS 187
Query: 240 ---GPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVG 296
P L+L+PTREL+ QI + + G+ L +C YGG SK Q A+ G +IV+G
Sbjct: 188 KKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIG 247
Query: 297 TPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
TPGR+ D+++ +L+ V+F+VLDEADRM DMG
Sbjct: 248 TPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMG 281
Score = 40 (19.1 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 14 SYKGNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEE 56
S K + + + +E P + G+++E+ + K K K+ E+
Sbjct: 29 SKKNKHTEENHEVEEVPQEV-TNGVEEELSNKEKKKKRKREEK 70
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 75/165 (45%), Positives = 102/165 (61%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+S F G ++ +L K YT+PTPIQ QA+P + GRDI+G+A+TG+GKT AF P+
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L + P G L+LAPTREL+ QI +G G NL VV GG Q +
Sbjct: 66 LDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIR 125
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
LE GA I+V TPGR+ID+++ A L++V L+LDEAD+M D+G
Sbjct: 126 QLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLG 170
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 356 (130.4 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 78/218 (35%), Positives = 124/218 (56%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y E +++P + +++ ++ +R + ITV+G D P P+ +F F L++
Sbjct: 52 ITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRM 111
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+ PTPIQ Q +P LSGRD+IG+A TGSGKT F+ PM++ + ++ + P G
Sbjct: 112 LKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAG 171
Query: 239 DGPMGLILAPTRELSQQIYNEAKRF-----GKGY-NLSVVCCYGGGSKWDQSKALELGAE 292
+GP+ L++ P+REL++Q Y+ ++F GY L + C GG Q ++ G
Sbjct: 172 EGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVH 231
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
IVV TPGR+ D++ L+ L LDEADR+ D+G
Sbjct: 232 IVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLG 269
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 359 (131.4 bits), Expect = 3.5e-32, P = 3.5e-32
Identities = 75/193 (38%), Positives = 115/193 (59%)
Query: 141 LTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPA 200
+ P++ + L+ I++ G D P P+ ++ G ++K L+K Y P+ IQ A+P
Sbjct: 223 MKPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPV 282
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGD---GPMGLILAPTRELSQQIY 257
L +D+IG+A+TGSGKT AFI P+++ I L + GP ++LAPTREL+QQI
Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342
Query: 258 NEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTF 317
E +F + V GG + +QS + GA IVV TPGR++D ++ L++ T+
Sbjct: 343 VEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTY 402
Query: 318 LVLDEADRMFDMG 330
+V+DEADRM DMG
Sbjct: 403 VVMDEADRMLDMG 415
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 83/215 (38%), Positives = 122/215 (56%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSGITV-----SGADP--PYPVSSFGHFGFDEV-- 177
+EKNFY+ A ++P+E + R ++ + G P PV F F++
Sbjct: 5 IEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDV-FEQYPD 63
Query: 178 LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK-ELE 236
+M +RK + PTPIQ+QA P L G D+IG+A+TG+GKT A++ P +H+ Q +
Sbjct: 64 IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKD 123
Query: 237 PGDGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIVV 295
GP L+LAPTREL+ Q+ E ++ KG+ +C YGGG + Q + G +IV+
Sbjct: 124 KRGGPGMLVLAPTRELALQVEAECLKYTYKGFKS--ICIYGGGDRKAQINVVTKGVDIVI 181
Query: 296 GTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
TPGR+ D+ L +T+LVLDEADRM DMG
Sbjct: 182 ATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMG 216
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 360 (131.8 bits), Expect = 3.9e-32, P = 3.9e-32
Identities = 77/196 (39%), Positives = 111/196 (56%)
Query: 138 IARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQA 197
+ +T ++ + R I+ G+ P P+ S+ L+KA+ + Y P+PIQ A
Sbjct: 284 LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAA 343
Query: 198 VPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM---DQKELEPGDGPMGLILAPTRELSQ 254
+P L RD+IG+A+TGSGKT AF+ PML +I E +GP +++APTREL+Q
Sbjct: 344 IPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQ 403
Query: 255 QIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNR 314
QI E +F V GG S +Q + G EIV+ TPGR+ID ++ LN+
Sbjct: 404 QIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQ 463
Query: 315 VTFLVLDEADRMFDMG 330
++VLDEADRM DMG
Sbjct: 464 CNYVVLDEADRMIDMG 479
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 357 (130.7 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 76/200 (38%), Positives = 109/200 (54%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y H ++ L + + LR + GITV G P P+ F H GF E L + L+ Y PT
Sbjct: 169 YTEHAFVSHLREDQIENLRRQLGITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPT 228
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRD++ A TGSGKT AF+ P+++ + Q + P GL+L PTRE
Sbjct: 229 PIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVILRALSQSK-----SPSGLVLTPTRE 283
Query: 252 LSQQIYNEAKRFGKGYN-LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI +AK G L GG Q L ++++ TPGR++D++K +
Sbjct: 284 LAIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRIQVIIATPGRLLDIIKQRSV 343
Query: 311 KLNRVTFLVLDEADRMFDMG 330
+L + +V+DEAD M MG
Sbjct: 344 ELGSIKIVVVDEADTMLKMG 363
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 356 (130.4 bits), Expect = 9.6e-32, P = 9.6e-32
Identities = 74/176 (42%), Positives = 109/176 (61%)
Query: 165 PVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWP 224
P++SF +VL+ ++ +YT PTP+Q A+P L RD++ A+TGSGKT AF++P
Sbjct: 245 PLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFP 304
Query: 225 MLVHIM--DQKELEPG--DG------PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCC 274
++ I+ E P G P L+LAPTREL+QQI++EA +F G +S V
Sbjct: 305 IISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVI 364
Query: 275 YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
YGG + Q L+ G +I+V T GR++D++ G L+++ +LVLDEADRM DMG
Sbjct: 365 YGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMG 420
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 341 (125.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 75/190 (39%), Positives = 111/190 (58%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ SG D P PV++F + D+ L+ + Y +PTP+Q ++P ++GRD++ A+TG
Sbjct: 174 VEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTG 233
Query: 215 SGKTGAFIWPMLVHIMDQKELEP-----GD-G------PMGLILAPTRELSQQIYNEAKR 262
SGKTG F++P+L P G G P LILAPTREL QI++EA++
Sbjct: 234 SGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARK 293
Query: 263 FGKGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVL 320
F Y V C YGG Q + +E G +++V TPGR++D+++ G L + +L+L
Sbjct: 294 FA--YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLIL 351
Query: 321 DEADRMFDMG 330
DEADRM DMG
Sbjct: 352 DEADRMLDMG 361
Score = 37 (18.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 5 EYIPAPGSPSYKGNNA 20
++ PAPG P G A
Sbjct: 16 QHAPAPGGPPSGGRAA 31
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 352 (129.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 79/207 (38%), Positives = 117/207 (56%)
Query: 125 EEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRK 184
E + Y+ I+ LT ++ + ++A+ GI G + PV F H F VL + L+
Sbjct: 128 ENTKSYSYKQDAFISELTEEQIERVKAELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKA 187
Query: 185 CEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGL 244
Y +PTP+Q Q VP L+GRD+I A TGSGKT AF+ P+++ + + P P L
Sbjct: 188 AGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQSESASPSC-PACL 246
Query: 245 ILAPTRELSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIID 303
IL PTREL+ QI +AK +G N+ GG Q L+ +IV+GTPGR+++
Sbjct: 247 ILTPTRELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLE 306
Query: 304 MVKMGATKLNRVTFLVLDEADRMFDMG 330
++K A +L+ V +V+DEAD M MG
Sbjct: 307 ILKQKAVQLDHVRTVVVDEADTMLKMG 333
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 337 (123.7 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 76/218 (34%), Positives = 120/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K ++ I ++ +R K I V G P P+ SF F +++
Sbjct: 132 ITYDDPIKTSWRAPRYILAMSEARHNRVRKKYHILVEGEGIPPPIKSFKEMKFPAAILRG 191
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 192 LKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 251
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + ++ G
Sbjct: 252 EGPYGLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVH 311
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 312 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 349
Score = 38 (18.4 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 90 SDVDLEYDEDGNPIAPKKSK 109
SD+ E DED P P K +
Sbjct: 19 SDMSGEDDEDYVPYVPVKQR 38
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 328 (120.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 80/207 (38%), Positives = 118/207 (57%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGA-DPPY-PVSSFGHFGFDEVLMKALRK 184
V FY E + L + E ++ I V + D P+ SF + D + + K
Sbjct: 72 VASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK 131
Query: 185 CEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM-DQKELEPGDGPMG 243
+ PTPIQA A P LSG+D++GVA+TGSGKT AF P + H+M DQK+ G
Sbjct: 132 --FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR----GIQV 185
Query: 244 LILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIID 303
L+++PTREL+ QIY+ + C YGG K +Q L+ +++VV TPGR++D
Sbjct: 186 LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKK-SQVVVATPGRLLD 244
Query: 304 MVKMGATKLNRVTFLVLDEADRMFDMG 330
+++ G+ L++V +LVLDEADRM + G
Sbjct: 245 LLQEGSVDLSQVNYLVLDEADRMLEKG 271
Score = 41 (19.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 28 EDPLDAFMKGIDKEVKQEAKGVKTKKIEEVK 58
E+ D K +D+EV ++ K K KK ++ K
Sbjct: 4 EEIADKKRKVVDEEVIEKKKSKKHKKDKKDK 34
Score = 37 (18.1 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 39 DKEVKQEAKGVKTKKIE-EVKG 59
DK+ K+E K K KK + E KG
Sbjct: 30 DKKDKKEKKDKKHKKHKKEKKG 51
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 79/218 (36%), Positives = 124/218 (56%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y E ++P I +++ ++ +R + I V+G D P P+ +F F ++
Sbjct: 101 ITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDT 160
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L++ PTPIQ Q +P L+GRD+IG+A TGSGKT F+ PM++ + ++ + P G
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAG 220
Query: 239 DGPMGLILAPTRELSQQIYNEAKRF-----GKGYN-LSVVCCYGGGSKWDQSKALELGAE 292
+GP+GLI+ P+REL++Q Y ++F GY L + C GG Q + ++ G
Sbjct: 221 EGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 280
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
IVV TPGR+ DM+ L+ +L LDEADR+ D+G
Sbjct: 281 IVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLG 318
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 339 (124.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 85/216 (39%), Positives = 125/216 (57%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSG-ITVSG---ADP---PYPVSSFGH-FGFDEVL 178
++KNFY + +A + +E + R ++ I V D P PV +F F +
Sbjct: 230 LKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHYPGI 289
Query: 179 MKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPG 238
M+ + + + PTPIQ+QA P L+G D+IG+A+TG+GKT A++ P +H MD + + P
Sbjct: 290 MENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIH-MDGQPM-PR 347
Query: 239 D---GPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIV 294
D GP L+L PTREL+ QI E ++ KG+ +C YGGG + Q K + G +IV
Sbjct: 348 DKRNGPGMLVLTPTRELALQIEAECNKYSYKGFKS--ICIYGGGDRNAQIKVVTSGVDIV 405
Query: 295 VGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ TPGR+ D+ L +T+LVLDEADRM DMG
Sbjct: 406 IATPGRLNDLQMNELINLRSITYLVLDEADRMLDMG 441
Score = 38 (18.4 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 90 SDVDLEYDEDGNPIAPKKSKYIDPLP 115
SD + EYD DG ++ + + P P
Sbjct: 2 SDWEDEYDGDGVAVSKQLTLPAKPAP 27
Score = 37 (18.1 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 45 EAKGVKTKKIEEVK 58
EAK V + EEVK
Sbjct: 237 EAKSVAARSAEEVK 250
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 349 (127.9 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 71/168 (42%), Positives = 103/168 (61%)
Query: 163 PYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFI 222
P P+ + F + L K ++ PTP+Q+ P ALSG D++G++KTGSGKT +FI
Sbjct: 136 PKPIDTIESVPFQSTIKNFLSK-KFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFI 194
Query: 223 WPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWD 282
P + HI+ Q GP L++APTREL+ QI EA+++ + N+ + YGG +
Sbjct: 195 LPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRS 254
Query: 283 QSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q L +IVVGTPGRIID ++ G L ++FLV+DEADR+ +MG
Sbjct: 255 QQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMG 302
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 349 (127.9 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 76/200 (38%), Positives = 109/200 (54%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y+ H I L + + L+ + GI+V G D P+ F H GF E L + L+K Y PT
Sbjct: 168 YKEHPFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRDI+ A TGSGKT AF+ P+++ + + P LIL PTRE
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKT-----PSALILTPTRE 282
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI +AK G + V GG Q L ++++ TPGR++D++K +
Sbjct: 283 LAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 342
Query: 311 KLNRVTFLVLDEADRMFDMG 330
L+ + +V+DEAD M MG
Sbjct: 343 SLSGIKIVVVDEADTMLKMG 362
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 74/163 (45%), Positives = 103/163 (63%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F FGF + + Y +PTPIQAQA+PA ++GRD++G+A+TG+GKT AF P+L H
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPIL-H 61
Query: 229 IMDQKELEPGDGPM-GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
+ Q E G + L++APTREL++QI + G+ L V YGG Q + L
Sbjct: 62 RLQQGER----GRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKL 117
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ GAE+VV PGR++D + G L+R+ LVLDEAD+MFDMG
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMG 160
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 350 (128.3 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 70/144 (48%), Positives = 99/144 (68%)
Query: 187 YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLIL 246
+++P+PIQAQ+ P A+ RDI+ +AKTGSGKT ++ P +H+ + + GP L+L
Sbjct: 249 FSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQ-RIHNDSRMGPTILVL 307
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
+PTREL+ QI EA +FGK +S C YGG K Q K +E G +IVV TPGR+ D+++
Sbjct: 308 SPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILE 367
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
M L++V++LVLDEADRM DMG
Sbjct: 368 MKRISLHQVSYLVLDEADRMLDMG 391
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 348 (127.6 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 86/229 (37%), Positives = 126/229 (55%)
Query: 106 KKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYP 165
+K K+ D LPPI + V + + Q DI R K G P P
Sbjct: 166 EKRKWAD-LPPIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDG---EKRPIPNP 221
Query: 166 VSSFGH-FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWP 224
+ F FG LMK+++K + PTPIQ+QA P L G D+IG+A+TG+GKT +++ P
Sbjct: 222 ICKFEDAFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMP 281
Query: 225 MLVHIMDQKELEPG--DGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKW 281
+H+ Q + G +GP L+L PTREL+ Q+ E ++ KG L VC YGGG++
Sbjct: 282 GFIHLNSQP-VSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKG--LKSVCIYGGGNRK 338
Query: 282 DQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q + + G +I++ TPGR+ D+ L +T+LVLDEAD+M D+G
Sbjct: 339 GQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG 387
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 348 (127.6 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 85/217 (39%), Positives = 126/217 (58%)
Query: 124 YEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALR 183
YEE ++P I R + ++ + R + GI+ G P P+ SF F + L++ ++
Sbjct: 146 YEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQ 205
Query: 184 KCE-YTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---GD 239
K + +PT IQ Q +P ALSGRD+IG+A TGSGKT F+ P+++ ++Q+ P +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 240 GPMGLILAPTRELSQQIYNEA-KRF---GK-GY-NLSVVCCYGGGSKWDQSKALELGAEI 293
GP GLI+ P+REL++QI++ + F GK G + C GG +Q+K + G I
Sbjct: 266 GPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHI 325
Query: 294 VVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
VV TPGR+ DM+ L +LVLDEADRM DMG
Sbjct: 326 VVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMG 362
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 350 (128.3 bits), Expect = 5.8e-31, P = 5.8e-31
Identities = 71/186 (38%), Positives = 106/186 (56%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G + P ++SF E++ + Y PTP+Q A+P ++GRD++ A+TG
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTG 342
Query: 215 SGKTGAFIWPMLVHIMDQKELEPGDG----------PMGLILAPTRELSQQIYNEAKRFG 264
SGKT AF+ P+L + + + P P+GL+LAPTREL+ QI+ EAK+F
Sbjct: 343 SGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFA 402
Query: 265 KGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEAD 324
+ YGG + +Q + L+ G ++V TPGR+ DM+ G L + FLVLDEAD
Sbjct: 403 YRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEAD 462
Query: 325 RMFDMG 330
RM DMG
Sbjct: 463 RMLDMG 468
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 345 (126.5 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 75/200 (37%), Positives = 105/200 (52%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y H I+ L + + LR + GI V G P P+ FGH GF E L L+ Y PT
Sbjct: 156 YTEHAFISNLREDQIENLRGQLGIVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPT 215
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRD++ A TGSGKT AF+ P++ + Q + P L+L PTRE
Sbjct: 216 PIQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQSK-----APSALVLTPTRE 270
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI +AK G + GG Q L ++++ TPGR++D++K +
Sbjct: 271 LAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSV 330
Query: 311 KLNRVTFLVLDEADRMFDMG 330
L + +V+DEAD M MG
Sbjct: 331 DLGNIKIVVVDEADTMLKMG 350
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 346 (126.9 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 88/236 (37%), Positives = 133/236 (56%)
Query: 106 KKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD---- 161
+K+K+ D LPPI +KNFY+ + ++ EA R K ++ D
Sbjct: 184 QKTKWAD-LPPI----------KKNFYKESTATSAMSKVEADSWR-KENFNITWDDLKDG 231
Query: 162 ---P-PYPVSSFGH-FGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSG 216
P P P +F F +M+ ++K + PTPIQ+QA P L G D+IGVA+TG+G
Sbjct: 232 EKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTG 291
Query: 217 KTGAFIWPMLVHIMDQKELE-PGDGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCC 274
KT ++ P +H++ Q L+ + P L+L PTREL+ Q+ E ++ KG L VC
Sbjct: 292 KTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG--LRSVCV 349
Query: 275 YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
YGGG++ +Q + L+ G +I++ TPGR+ D+ L +T+LVLDEAD+M DMG
Sbjct: 350 YGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMG 405
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 346 (126.9 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 83/238 (34%), Positives = 124/238 (52%)
Query: 97 DEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGIT 156
D++G+ A K Y+ P PP + S+I + ++DI +
Sbjct: 222 DQEGSENAGPKVVYVPPPPPEEESSIFSHYATGINFDKYDDIL---------------VD 266
Query: 157 VSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSG 216
VSG++PP + +F G + L K + K Y PTP+Q +P +GRD++ A+TGSG
Sbjct: 267 VSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSG 326
Query: 217 KTGAFIWPMLVHIMDQ----KELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVV 272
KT AF+ P+L M + P +I+APTREL QIY EA++F G + V
Sbjct: 327 KTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPV 386
Query: 273 CCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
YGG + + + G ++ TPGR+ D++ G L++V +LVLDEADRM DMG
Sbjct: 387 VVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLDMG 444
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 196 LKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 255
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 256 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 353
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 71/168 (42%), Positives = 102/168 (60%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
V+SF G L L + Y SPTP+QA +PA LSGRD++ A TGSGKT AF P+
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 226 LVHIMDQKELEPGDGPMG-LILAPTRELSQQIYNEAKRFGKGYN--LSVVCCYGGGSKWD 282
L + + K + G + L+L PTREL+QQ+ + + +N L +V +GG S
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 283 QSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q ++L GA+++V TPGR++D++ A KL +V+ VLDEADRM +G
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLG 175
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 71/168 (42%), Positives = 102/168 (60%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
V+SF G L L + Y SPTP+QA +PA LSGRD++ A TGSGKT AF P+
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 226 LVHIMDQKELEPGDGPMG-LILAPTRELSQQIYNEAKRFGKGYN--LSVVCCYGGGSKWD 282
L + + K + G + L+L PTREL+QQ+ + + +N L +V +GG S
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 283 QSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q ++L GA+++V TPGR++D++ A KL +V+ VLDEADRM +G
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLG 175
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 343 (125.8 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 255
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 256 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 353
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 343 (125.8 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 255
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 256 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 353
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 343 (125.8 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 195
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 255
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 256 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 353
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 343 (125.8 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 154 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 213
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 214 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 273
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 274 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 333
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 334 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 371
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 343 (125.8 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 85/216 (39%), Positives = 121/216 (56%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-------P-PYPVSSF--GHFGFDE 176
V+KNFY E + ++ ++ R K + D P P P +F + E
Sbjct: 193 VKKNFYIESEKTSSMSQEQVDNWR-KENYNIICDDLKDGEKRPLPNPTCNFEDAFHCYPE 251
Query: 177 VLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELE 236
V M+ + K + PTPIQ+QA P L G D+IGVA+TG+GKT +++ P +HI Q L+
Sbjct: 252 V-MRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQ 310
Query: 237 PG-DGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIV 294
+GP L+L PTREL+ Q+ E + +G L VC YGGG + Q K L GA+I+
Sbjct: 311 RARNGPGMLVLTPTRELALQVDAECSEYSYRG--LKSVCIYGGGDRDGQIKDLSKGADII 368
Query: 295 VGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ TPGR+ D+ L +T+LVLDEAD+M DMG
Sbjct: 369 IATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMG 404
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 70/164 (42%), Positives = 100/164 (60%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G +++A+ + Y PTPIQ QA+PA L GRD++ A+TG+GKT F P+L
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 228 HIMDQKELEPGDGPM-GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
H++ ++ G P+ LIL PTREL+ QI + + K N+ + +GG S Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +++V TPGR++D+ A KL++V LVLDEADRM DMG
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG 165
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 343 (125.8 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF F +++
Sbjct: 163 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRG 222
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 223 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 282
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 283 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 342
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 343 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 380
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 344 (126.2 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 87/256 (33%), Positives = 132/256 (51%)
Query: 80 NPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIV-YEEVEKNFYQPHEDI 138
N + G++ E E G P+ + YI P PP + S I + + NF ++DI
Sbjct: 219 NEDIGVESGKGQEGFERSEQG----PRVT-YIPPPPPAEESDIFKHYQTGINF-DKYDDI 272
Query: 139 ARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAV 198
+ VSG+D P + +F + L K + K Y TPIQ ++
Sbjct: 273 V---------------VEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSI 317
Query: 199 PAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM----DQKELEPGDGPMGLILAPTRELSQ 254
P ++GRD++ A+TGSGKT AF+ P+L H+M + + P +I+APTREL
Sbjct: 318 PIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELIN 377
Query: 255 QIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNR 314
QIY +A++F G + V YGG + K + G I+ TPGR++D+++ L +
Sbjct: 378 QIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTK 437
Query: 315 VTFLVLDEADRMFDMG 330
+ +LVLDEADRM DMG
Sbjct: 438 LRYLVLDEADRMLDMG 453
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 340 (124.7 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 75/200 (37%), Positives = 107/200 (53%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y+ H I L + + L+ + GI V G D P+ F H GF E L L+ Y PT
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPT 228
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRD++ A TGSGKT AF+ P++ + + + P LIL PTRE
Sbjct: 229 PIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKT-----PSALILTPTRE 283
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI N+AK G + V GG Q L ++++ TPGR++D++K +
Sbjct: 284 LAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 343
Query: 311 KLNRVTFLVLDEADRMFDMG 330
+L + +V+DEAD M MG
Sbjct: 344 ELCGIKIVVVDEADTMLKMG 363
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 341 (125.1 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 76/218 (34%), Positives = 120/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF +++
Sbjct: 135 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRG 194
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 195 LKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 254
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 255 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVH 314
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
I+V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 315 IMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 352
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 343 (125.8 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 93/265 (35%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E G+ PK + YI P PP D +I + + NF
Sbjct: 213 YKGLNEEVITGSGKNSWKSEAEGGESGDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 270
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG DPP + +F + L + K YT TP
Sbjct: 271 DKYDTIL---------------VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTP 315
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 316 VQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 372
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 373 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVI 432
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 433 GKEKIGLRQVKYLVLDEADRMLDMG 457
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 343 (125.8 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 93/265 (35%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E G+ PK + YI P PP D +I + + NF
Sbjct: 213 YKGLNEEVITGSGKNSWKSEAEGGESGDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 270
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG DPP + +F + L + K YT TP
Sbjct: 271 DKYDTIL---------------VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTP 315
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 316 VQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 372
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 373 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVI 432
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 433 GKEKIGLRQVKYLVLDEADRMLDMG 457
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 340 (124.7 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 82/230 (35%), Positives = 130/230 (56%)
Query: 106 KKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP-PY 164
KK K+ D LPPI + + + + + +I R +E +R +T P P
Sbjct: 143 KKRKWAD-LPPIKKNLYIESKATHSLSEAQVEIWR---KENFNIRCDD-LTEGEKRPIPK 197
Query: 165 PVSSFGHFGFDEV--LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFI 222
P +F F + +M+++R+ + PTPIQ+Q+ P L G D+IG+A+TG+GKT +++
Sbjct: 198 PTCTFED-AFQQYPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYL 256
Query: 223 WPMLVHIMDQK-ELEPGDGPMGLILAPTRELSQQIYNEAKRF-GKGYNLSVVCCYGGGSK 280
P +HI Q + +GP L+L PTREL+ Q+ E ++ KG L VC YGGG++
Sbjct: 257 MPGFIHIHSQPVSRKQRNGPGMLVLTPTRELALQVEAECSKYLYKG--LKSVCIYGGGNR 314
Query: 281 WDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q + + G +I++ TPGR+ D+ L +T+LVLDEAD+M D+G
Sbjct: 315 KGQIQDVTKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG 364
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 341 (125.1 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 73/187 (39%), Positives = 108/187 (57%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ VSG P + F GF +M+ + + Y+ PTP+Q ++P L+ RD++ A+TG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 215 SGKTGAFIWPMLVHIM--DQKELEPG---DG-----PMGLILAPTRELSQQIYNEAKRFG 264
SGKT AF+ P++ HI+ ++P +G P L+L+PTREL+ QI+ EA +F
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
Query: 265 KGYNLSVVCCYGGGSKW-DQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEA 323
N+ YGG + DQ L G I++ TPGR+ID+++ G L +LVLDEA
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEA 306
Query: 324 DRMFDMG 330
DRM DMG
Sbjct: 307 DRMLDMG 313
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 340 (124.7 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 83/221 (37%), Positives = 121/221 (54%)
Query: 114 LPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGH-F 172
LPPI + V + + Q DI R K G P P+ F F
Sbjct: 164 LPPIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDG---EKRPIPNPICKFEDAF 220
Query: 173 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ 232
G LMK+++K + PTPIQ+QA P L G D+IG+A+TG+GKT +++ P +H+ Q
Sbjct: 221 GPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQ 280
Query: 233 KELEPG--DGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALEL 289
+ G +GP L+L PTREL+ Q+ E ++ KG L VC YGGG++ Q + +
Sbjct: 281 P-VSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKG--LKSVCIYGGGNRKGQIQDIMK 337
Query: 290 GAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +I++ TPGR+ D+ L +T+LVLDEAD+M D+G
Sbjct: 338 GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLG 378
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 340 (124.7 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 75/200 (37%), Positives = 107/200 (53%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y+ H I L + + L+ + GI V G D P+ F H GF E L L+ Y PT
Sbjct: 169 YKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPT 228
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRD++ A TGSGKT AF+ P++ + + + P LIL PTRE
Sbjct: 229 PIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKT-----PSALILTPTRE 283
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI N+AK G + V GG Q L ++++ TPGR++D++K +
Sbjct: 284 LAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 343
Query: 311 KLNRVTFLVLDEADRMFDMG 330
+L + +V+DEAD M MG
Sbjct: 344 ELCGIKIVVVDEADTMLKMG 363
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 336 (123.3 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 91/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 191 YKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 248
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 249 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 293
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 294 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECII 350
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 351 VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDII 410
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 411 GKEKIGLKQIKYLVLDEADRMLDMG 435
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 66/162 (40%), Positives = 98/162 (60%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G L+KA+ + Y SPTPIQ QA+P+ L+G++++ A+TG+GKT +F+ P+L
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
D ++ P +IL PTREL+ Q+ ++ K L+ + YGG Q K L
Sbjct: 63 FADAPKIRP-KRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +++V TPGR++DM A + + V+ LVLDEADRM DMG
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG 163
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 66/162 (40%), Positives = 98/162 (60%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G L+KA+ + Y SPTPIQ QA+P+ L+G++++ A+TG+GKT +F+ P+L
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
D ++ P +IL PTREL+ Q+ ++ K L+ + YGG Q K L
Sbjct: 63 FADAPKIRP-KRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +++V TPGR++DM A + + V+ LVLDEADRM DMG
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG 163
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 339 (124.4 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 91/264 (34%), Positives = 132/264 (50%)
Query: 78 EENPNAGLQDNDSDVDLEYD----EDGNPIAPKKSK--YIDPLPPIDHSTIV-YEEVEKN 130
E G + D DV D E+ + P++ K YI P P D +I + ++ N
Sbjct: 101 ERGRGGGYRGRDEDVFAAGDGRGAENSDAADPERPKVTYIPPSLPEDEDSIFSHYKMGIN 160
Query: 131 FYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSP 190
F ++DI + VSG + P + +F E L + + Y P
Sbjct: 161 F-DKYDDIL---------------VDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKP 204
Query: 191 TPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ----KELEPGDGPMGLIL 246
TP+Q +P +GRD++ A+TGSGKT AF+ P+L +M P +I+
Sbjct: 205 TPVQKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIV 264
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL QIY EA++F G + V YGG + Q + +E G ++ GTPGR++DM+
Sbjct: 265 APTRELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIG 324
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
G L++V LVLDEADRM DMG
Sbjct: 325 RGKVGLSKVRHLVLDEADRMLDMG 348
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 339 (124.4 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 73/188 (38%), Positives = 110/188 (58%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ SG D P P+ F DE+LM+ ++ +T PTP+Q ++P GRD++ A+TG
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201
Query: 215 SGKTGAFIWPMLVHI-------MDQK--ELEPGDG-PMGLILAPTRELSQQIYNEAKRFG 264
SGKTG F++P+ + + +K G P L+LAPTREL+ QI+ EA++F
Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261
Query: 265 KGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDE 322
Y V C YGG +Q + ++ G +++V TPGR+ D+++ G L + +LVLDE
Sbjct: 262 --YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDE 319
Query: 323 ADRMFDMG 330
ADRM DMG
Sbjct: 320 ADRMLDMG 327
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 336 (123.3 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 70/180 (38%), Positives = 104/180 (57%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +SG DPP P+ +F F + L K + K Y+ TP+Q ++P +GRD++ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 215 SGKTGAFIWPMLVHIMDQ----KELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLS 270
SGKT AF+ P++ +M + P +I+APTREL QI+ EA++F G +
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 271 VVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V YGG + + G I+ TPGR++D+++ G L V +LVLDEADRM DMG
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMG 334
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 338 (124.0 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 75/188 (39%), Positives = 111/188 (59%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ SG D P P++ F D +L++ ++ +T PTP+Q +VP +GRD++ A+TG
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189
Query: 215 SGKTGAFIWPMLVHIMDQ-KELEP-GDG--------PMGLILAPTRELSQQIYNEAKRFG 264
SGKTG F++P+L +P G P +I+APTREL+ QI++EAK+F
Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249
Query: 265 KGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDE 322
Y V C YGG +Q + +E G +++V TPGR+ D+++ G L V +LVLDE
Sbjct: 250 --YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDE 307
Query: 323 ADRMFDMG 330
ADRM DMG
Sbjct: 308 ADRMLDMG 315
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 338 (124.0 bits), Expect = 5.5e-30, P = 5.5e-30
Identities = 75/218 (34%), Positives = 120/218 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I Y++ K + P + ++ + + +R K I V G P P+ SF +++
Sbjct: 136 ITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRG 195
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---G 238
L+K PTPIQ Q +P LSGRD+IG+A TGSGKT F P+++ ++Q++ P
Sbjct: 196 LKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKR 255
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYN------LSVVCCYGGGSKWDQSKALELGAE 292
+GP GLI+ P+REL++Q + + + + L C GG S +Q + + G
Sbjct: 256 EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
Query: 293 IVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++V TPGR++D+++ L+ +L LDEADRM DMG
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMG 353
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 336 (123.3 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 70/180 (38%), Positives = 104/180 (57%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +SG DPP P+ +F F + L K + K Y+ TP+Q ++P +GRD++ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 215 SGKTGAFIWPMLVHIMDQ----KELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLS 270
SGKT AF+ P++ +M + P +I+APTREL QI+ EA++F G +
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 271 VVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
V YGG + + G I+ TPGR++D+++ G L V +LVLDEADRM DMG
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMG 334
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 337 (123.7 bits), Expect = 7.0e-30, P = 7.0e-30
Identities = 78/219 (35%), Positives = 121/219 (55%)
Query: 122 IVYEEVEKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA 181
I YE+ K ++P I ++ +E + +R + I V G P P+ SF F + ++
Sbjct: 132 IQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNG 191
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK---ELEPG 238
L +PTPIQ Q +P L+GRD+IG+A TGSGKT F+ P+++ ++Q+ E
Sbjct: 192 LAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERN 251
Query: 239 DGPMGLILAPTRELSQQIYNEAKRFGKGYNL----SVVCCYGGGSKWDQSKALEL---GA 291
+GP GLI+ P+REL++Q + + + K + C G S+AL++ G
Sbjct: 252 EGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGL-PVSEALDVISRGV 310
Query: 292 EIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
IVV TPGR++DM+ L+ +L +DEADRM DMG
Sbjct: 311 HIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMG 349
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/165 (41%), Positives = 98/165 (59%)
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
+ F G E L+KA+R Y +P+PIQAQA+PA +SGRD++ A+TG+GKT F P+L
Sbjct: 6 TKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLL 65
Query: 227 VHIMDQKELEPGDGPM-GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
+ K + + LIL PTREL+ QI + +GK NL + +GG Q
Sbjct: 66 QRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIA 125
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +++V TPGR++D+ A K +++ +LDEADRM DMG
Sbjct: 126 RLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMG 170
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 70/166 (42%), Positives = 98/166 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G L++A+R+ Y PTP+Q QA+P L RD++ A+TG+GKT F P+L
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 228 HI-MDQKELEPGDGPM--GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQS 284
+ + + L+ P+ LIL PTREL+ Q++ + +GK L +GG S Q
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 285 KALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +I+V TPGR++D+V G L+RV F VLDEADRM DMG
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG 176
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 70/166 (42%), Positives = 98/166 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G L++A+R+ Y PTP+Q QA+P L RD++ A+TG+GKT F P+L
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 228 HI-MDQKELEPGDGPM--GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQS 284
+ + + L+ P+ LIL PTREL+ Q++ + +GK L +GG S Q
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 285 KALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +I+V TPGR++D+V G L+RV F VLDEADRM DMG
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG 176
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 329 (120.9 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 75/179 (41%), Positives = 109/179 (60%)
Query: 155 ITVSGADPPY--PVSSFGHFG-FDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVA 211
IT + AD P P+ SF ++ L L + SPT IQ+ P +GRD+IG+A
Sbjct: 60 ITDASADKPSLRPIISFSFLPPSNKDLYAPLDG--FASPTAIQSATWPLLFAGRDVIGIA 117
Query: 212 KTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSV 271
+TGSGKT AF P L ++D K + P+ ++++PTREL+ QIY++ +F + ++ V
Sbjct: 118 ETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQV 177
Query: 272 VCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
C +GG K +Q +AL+ A +VV TPGR+ D+ G+ L RV +LVLDEADRM D G
Sbjct: 178 ACIFGGVKKDEQREALK-SAAVVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKG 235
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 336 (123.3 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 92/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 184 YKGLNEEVVTGSGKNSWKSETEGGESSDSQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 241
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 242 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 286
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 287 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 343
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 344 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDII 403
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 404 GKEKIGLKQVKYLVLDEADRMLDMG 428
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 330 (121.2 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 86/244 (35%), Positives = 124/244 (50%)
Query: 95 EY--DEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPHEDIARLTPQEAQELRAK 152
EY DE + + + K L +D S V+ ++ FY D + +AQ LR K
Sbjct: 39 EYICDETNDDVCSLECKQA-LLRRVD-SARVFPATDECFYV--RDPGS-SSHDAQLLRRK 93
Query: 153 SGITVSG---ADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIG 209
I V G A PP PV +F G L+ L Y PTPIQ QA+PAAL+G+ ++
Sbjct: 94 LDIHVQGQGSAVPP-PVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLA 152
Query: 210 VAKTGSGKTGAFIWPMLVHIMDQKELEPGD---GPMGLILAPTRELSQQIYNEAKRFGKG 266
A TGSGKT +F+ P++ P D P+ ++LAPTREL Q+ ++AK GKG
Sbjct: 153 SADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 267 YNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRM 326
GG Q ++ G E+++GTPGR++D++ +L+ + VLDE D M
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272
Query: 327 FDMG 330
G
Sbjct: 273 LQRG 276
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 336 (123.3 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 91/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 191 YKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 248
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 249 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 293
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 294 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECII 350
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 351 VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDII 410
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 411 GKEKIGLKQIKYLVLDEADRMLDMG 435
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 336 (123.3 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 91/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 209 YKGLNEEVVTGSGKNSWKSEAEGGESSDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 266
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 267 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 311
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 312 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECII 368
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 369 VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDII 428
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 429 GKEKIGLKQIKYLVLDEADRMLDMG 453
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 336 (123.3 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 91/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 211 YKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 268
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 269 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 313
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 314 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECII 370
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 371 VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDII 430
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 431 GKEKIGLKQIKYLVLDEADRMLDMG 455
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/162 (42%), Positives = 94/162 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F FG D LM + + PT IQ QA+PAA++G D+I +KTGSGKT AFI P L
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ + L D P +IL PTREL++Q++++ + F V GG + DQ K L+
Sbjct: 63 LSKNRALSKRD-PRVVILTPTRELAKQVFSQLRLFTANTQYKAVLILGGENFNDQVKVLQ 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
E +V TPGR+ D + G LN + L+LDEADRM D+G
Sbjct: 122 KEPEFIVATPGRLADHLTQGHFHLNGLELLILDEADRMLDLG 163
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/162 (42%), Positives = 94/162 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F FG D LM + + PT IQ QA+PAA++G D+I +KTGSGKT AFI P L
Sbjct: 3 FSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ + L D P +IL PTREL++Q++++ + F V GG + DQ K L+
Sbjct: 63 LSKNRALSKRD-PRVVILTPTRELAKQVFSQLRLFTANTQYKAVLILGGENFNDQVKVLQ 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
E +V TPGR+ D + G LN + L+LDEADRM D+G
Sbjct: 122 KEPEFIVATPGRLADHLTQGHFHLNGLELLILDEADRMLDLG 163
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 332 (121.9 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 75/200 (37%), Positives = 108/200 (54%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y+ H I L + + L+ + GI V G + P+ F H EVL L+K Y PT
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRDI+ A TGSGKT AF+ P+++ + + + P LIL PTRE
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSALILTPTRE 282
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI +AK G + V GG Q L+ ++++ TPGR++D++K +
Sbjct: 283 LAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSV 342
Query: 311 KLNRVTFLVLDEADRMFDMG 330
+L V +V+DEAD M MG
Sbjct: 343 ELCGVKIVVVDEADTMLKMG 362
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 335 (123.0 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 92/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E N + E E G+ PK + YI P PP D +I + + NF
Sbjct: 212 YKGLNEEVITSSGKNSWKSEAEGGESGDTQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 269
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 270 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 314
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 315 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECII 371
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 372 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDII 431
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 432 GKEKIGLRQVKYLVLDEADRMLDMG 456
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 333 (122.3 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 66/168 (39%), Positives = 97/168 (57%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G E L++A+ YT PTP+Q +A+PA L GRD++ A+TG+GKTG F P+L
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 228 HIM-----DQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWD 282
+ D+ + P L+L PTREL+ Q++ K + + C +GG
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNP 121
Query: 283 QSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q +A+ G +++V PGR++D+ G+ L+ V LVLDEADRM DMG
Sbjct: 122 QVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMG 169
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 92/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 185 YKGLNEEVVTGSGKNSWKSEAEGGESSDIQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 242
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 243 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 287
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 288 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 344
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 345 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDII 404
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 405 GKEKIGLKQVKYLVLDEADRMLDMG 429
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 334 (122.6 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 92/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 196 YKGLNEEVVTGSGKNSWKSEAEGGESSDIQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 253
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 254 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 298
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 299 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 355
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 356 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDII 415
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 416 GKEKIGLKQVKYLVLDEADRMLDMG 440
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 334 (122.6 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 92/265 (34%), Positives = 132/265 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTI-VYEEVEKNFY 132
Y+ + E G N + E E + PK + YI P PP D +I + + NF
Sbjct: 196 YKGLNEEVVTGSGKNSWKSEAEGGESSDIQGPKVT-YIPPPPPEDEDSIFAHYQTGINF- 253
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 254 DKYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 298
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLI 245
+Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I
Sbjct: 299 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQE---PECII 355
Query: 246 LAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMV 305
+APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 356 VAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDII 415
Query: 306 KMGATKLNRVTFLVLDEADRMFDMG 330
L +V +LVLDEADRM DMG
Sbjct: 416 GKEKIGLKQVKYLVLDEADRMLDMG 440
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 332 (121.9 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 75/200 (37%), Positives = 108/200 (54%)
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
Y+ H I L + + L+ + GI V G + P+ F H EVL L+K Y PT
Sbjct: 168 YKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRE 251
PIQ Q +P L GRDI+ A TGSGKT AF+ P+++ + + + P LIL PTRE
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSALILTPTRE 282
Query: 252 LSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGAT 310
L+ QI +AK G + V GG Q L+ ++++ TPGR++D++K +
Sbjct: 283 LAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSV 342
Query: 311 KLNRVTFLVLDEADRMFDMG 330
+L V +V+DEAD M MG
Sbjct: 343 ELCGVKIVVVDEADTMLKMG 362
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 333 (122.3 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 73/188 (38%), Positives = 110/188 (58%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ SG P P++SF DE+L++ ++ +T PTP+Q +VP +GRD++ A+TG
Sbjct: 174 VEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTG 233
Query: 215 SGKTGAFIWPMLV--HIMDQKELEPGDG--------PMGLILAPTRELSQQIYNEAKRFG 264
SGKTG F++P+L ++ + +G P L++APTREL QIY E+K+F
Sbjct: 234 SGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFS 293
Query: 265 KGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDE 322
Y V C YGG Q + ++ G +++V TPGR+ D++ G L + +LVLDE
Sbjct: 294 --YRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDE 351
Query: 323 ADRMFDMG 330
ADRM DMG
Sbjct: 352 ADRMLDMG 359
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 333 (122.3 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 89/264 (33%), Positives = 129/264 (48%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQ 133
Y+ + E G N + E E + PK + YI P PP D +I +
Sbjct: 212 YKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVT-YIPPPPPEDEDSIFAHYQTGISFD 270
Query: 134 PHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPI 193
++ I + VSG D P + +F + L + K YT TP+
Sbjct: 271 KYDTIL---------------VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPV 315
Query: 194 QAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-------KELEPGDGPMGLIL 246
Q ++P L+GRD++ A+TGSGKT AF+ P+L H+M KEL+ P +I+
Sbjct: 316 QKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQE---PECIIV 372
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL QIY EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 373 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 432
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 433 KEKIGLKQIKYLVLDEADRMLDMG 456
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 332 (121.9 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 87/264 (32%), Positives = 139/264 (52%)
Query: 73 YYRYMEENPNAGLQDNDSDVD-LEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNF 131
Y Y N G++ S + E DE PKK YI P PP + E N
Sbjct: 199 YGGYKGRNEEVGVESGKSQEEGNEKDEK-----PKKVTYIPPPPP---------DGEDNI 244
Query: 132 YQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPT 191
++ ++ + + + E+ + V+G D P + +F E L + + + Y T
Sbjct: 245 FRQYQ--SGINFDKYDEIL----VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLT 298
Query: 192 PIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ-----KELEPGDGPMGLIL 246
P+Q ++P ++GRD++ A+TGSGKT AF+ P+L ++M++ + L+ + P +I+
Sbjct: 299 PVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQE-PEAIII 357
Query: 247 APTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
APTREL QIY +A++F G + V YGG + +E G I+ TPGR++D+V
Sbjct: 358 APTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVS 417
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
L+++ +LVLDEADRM DMG
Sbjct: 418 KEKIGLSKLRYLVLDEADRMLDMG 441
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 330 (121.2 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 80/215 (37%), Positives = 120/215 (55%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSGITV-----SGADP--PYPVSSFGHFGFDEV-- 177
+EKNFY+ A ++P+E + R ++ + G P PV F F++
Sbjct: 192 IEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDV-FEQYPD 250
Query: 178 LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK-ELE 236
+M +RK + PTPIQ+QA P L G D+IG+A+TG+GKT A++ P +H+ Q +
Sbjct: 251 IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKD 310
Query: 237 PGDGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGAEIVV 295
GP L+LAPTREL+ Q+ E ++ KG+ +C YGGG + Q + G +IV+
Sbjct: 311 KRGGPGMLVLAPTRELALQVEAECLKYTYKGFKS--ICIYGGGDRKAQINVVTKGVDIVI 368
Query: 296 GTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
TPGR+ D+ L +T+L +EADRM DMG
Sbjct: 369 ATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMG 402
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 330 (121.2 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 83/219 (37%), Positives = 123/219 (56%)
Query: 127 VEKNFYQPHEDIARLTPQEAQELRAKSGITVSGAD-------P-PYPVSSFGH-FG-FDE 176
++KNFY E + ++ ++ Q R K + D P P P F F + E
Sbjct: 193 IKKNFYMESEITSSMSQEQVQNWR-KENYNIMCDDLKDGEKRPIPNPACKFEDAFQCYPE 251
Query: 177 VLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQK--- 233
V++ ++K + PTPIQ+QA P L G D+IGVA+TG+GKT +++ P +H+ Q
Sbjct: 252 VMIN-IKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVF 310
Query: 234 ELEPG-DGPMGLILAPTRELSQQIYNEAKRFG-KGYNLSVVCCYGGGSKWDQSKALELGA 291
L+ +GP L+L PTREL+ Q+ E ++ KG L VC YGGG + Q K L G
Sbjct: 311 SLQRARNGPGMLVLTPTRELALQVEAECSKYSYKG--LKSVCVYGGGDRDGQIKDLLKGV 368
Query: 292 EIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+I++ TPGR+ D+ L +++LVLDEAD+M DMG
Sbjct: 369 DIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMG 407
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 331 (121.6 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 71/188 (37%), Positives = 106/188 (56%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G D P P+S F E + + ++ Y PTP+Q ++PA GRD++ A+TG
Sbjct: 219 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 278
Query: 215 SGKTGAFIWPMLVHIMDQ------KELEPGDG-----PMGLILAPTRELSQQIYNEAKRF 263
SGKT AF+ P++ I+ + + G P L+L+PTRELS QI+NE+++F
Sbjct: 279 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 338
Query: 264 GKGYNLSVVCCYGGGSKW-DQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDE 322
++ YGG + DQ L LG I++ TPGR+ID++ G + +LVLDE
Sbjct: 339 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDE 398
Query: 323 ADRMFDMG 330
ADRM DMG
Sbjct: 399 ADRMLDMG 406
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 330 (121.2 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 79/191 (41%), Positives = 109/191 (57%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ V+G + P + SF E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 168 VEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 215 SGKTGAFIWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAK 261
SGKT AF+ P+L I K + E G G P+ L+LAPTREL+ QIY EA+
Sbjct: 228 SGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 262 RFGKGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLV 319
+F Y V+ C YGG Q + LE G ++V TPGR++DM++ G L+ +LV
Sbjct: 288 KFS--YRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345
Query: 320 LDEADRMFDMG 330
LDEADRM DMG
Sbjct: 346 LDEADRMLDMG 356
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 329 (120.9 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 66/168 (39%), Positives = 97/168 (57%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G E L+ A+ YT PTP+Q +A+PA L GRD++ A+TG+GKTG F P+L
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 228 HIM-----DQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWD 282
+ D+ + P L+L PTREL+ Q+++ K + + C +GG
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNP 121
Query: 283 QSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q +A+ G +++V PGR++D+ G+ L+ V LVLDEADRM DMG
Sbjct: 122 QVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMG 169
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 258 (95.9 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 50/93 (53%), Positives = 62/93 (66%)
Query: 238 GDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGT 297
GDGP+ L+LAPTREL+QQ+ A + + L C YGG K Q + LE G EI + T
Sbjct: 86 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 145
Query: 298 PGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
PGR+ID ++ G T L R T+LVLDEADRM DMG
Sbjct: 146 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 178
Score = 93 (37.8 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADP 162
EKNFYQ H D+AR T QE + R ITV G P
Sbjct: 55 EKNFYQEHPDLARRTAQEVETYRRSKEITVRGDGP 89
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 330 (121.2 bits), Expect = 6.1e-29, P = 6.1e-29
Identities = 88/262 (33%), Positives = 130/262 (49%)
Query: 74 YRYMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPI-DHSTIVYEEVEKNFY 132
Y+ + E AG N + E E G+ PK + YI P PP + +T + + NF
Sbjct: 189 YKGLNEEVVAGSGRNPWKSETEGGESGDIQGPKVT-YIPPPPPENEEATFAHYQTGINF- 246
Query: 133 QPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTP 192
++ I + VSG D P + +F + L + K YT TP
Sbjct: 247 DKYDTIL---------------VEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTP 291
Query: 193 IQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQ----KELEPGDGPMGLILAP 248
+Q +P L+GRD++ A+TGSGKT AF+ P+L H+M + P +I+AP
Sbjct: 292 VQKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGVTASRFKDQQEPECIIVAP 351
Query: 249 TRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMG 308
TREL QI+ EA++F G + V YGG + + G I+ TPGR++D++
Sbjct: 352 TRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKE 411
Query: 309 ATKLNRVTFLVLDEADRMFDMG 330
L ++ +LVLDEADRM DMG
Sbjct: 412 KIGLGQIRYLVLDEADRMLDMG 433
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 67/165 (40%), Positives = 98/165 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F G D L+ L + +PTPIQ QA+P L G+D++ A+TG+GKT AF P++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 228 HIMDQK-ELEPGDGPM-GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
++Q + E + L+L PTREL+QQ+ + + + KG L +V YGG S Q
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +I++ TPGR++D + + L +V LVLDEADRM DMG
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMG 171
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 67/165 (40%), Positives = 98/165 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F G D L+ L + +PTPIQ QA+P L G+D++ A+TG+GKT AF P++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 228 HIMDQK-ELEPGDGPM-GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
++Q + E + L+L PTREL+QQ+ + + + KG L +V YGG S Q
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G +I++ TPGR++D + + L +V LVLDEADRM DMG
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMG 171
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 328 (120.5 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 73/166 (43%), Positives = 106/166 (63%)
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
++F G +++AL Y P+PIQA+ +P L+GRD++G+A+TGSGKT AF P+L
Sbjct: 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65
Query: 227 VHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGGSKWD-QS 284
++ EL+ P L+LAPTREL+ Q+ F K ++VV YGG ++D Q
Sbjct: 66 QNL--DPELK---APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG-QRYDVQL 119
Query: 285 KALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+AL G +IVVGTPGR++D +K G L++++ LVLDEAD M MG
Sbjct: 120 RALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMG 165
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 326 (119.8 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
+++ + ++++ +T ++ + + IT G + P P+ + ++ L+ + + Y
Sbjct: 129 QESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGY 188
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM--DQKELEP---GDGPM 242
PT +Q ++P AL RD++GVA+TGSGKT AF+ P+L +I+ D+ L+ + P+
Sbjct: 189 EEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPV 248
Query: 243 GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQ-SKALELGAEIVVGTPGRI 301
GLILAPTREL+ QI EA++F K V+ GG D +K + G ++V TPGR+
Sbjct: 249 GLILAPTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRL 308
Query: 302 IDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+D ++ L++ LV+DEADRM DMG
Sbjct: 309 VDSIERKIVDLSKCYCLVMDEADRMIDMG 337
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 326 (119.8 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 73/209 (34%), Positives = 123/209 (58%)
Query: 128 EKNFYQPHEDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEY 187
+++ + ++++ +T ++ + + IT G + P P+ + ++ L+ + + Y
Sbjct: 129 QESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGY 188
Query: 188 TSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM--DQKELEP---GDGPM 242
PT +Q ++P AL RD++GVA+TGSGKT AF+ P+L +I+ D+ L+ + P+
Sbjct: 189 EEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPV 248
Query: 243 GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQ-SKALELGAEIVVGTPGRI 301
GLILAPTREL+ QI EA++F K V+ GG D +K + G ++V TPGR+
Sbjct: 249 GLILAPTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRL 308
Query: 302 IDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+D ++ L++ LV+DEADRM DMG
Sbjct: 309 VDSIERKIVDLSKCYCLVMDEADRMIDMG 337
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 324 (119.1 bits), Expect = 9.8e-29, P = 9.8e-29
Identities = 67/163 (41%), Positives = 97/163 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G L KA+ + Y +P+PIQAQA+PA L+G+D++ A+TG+GKT F P+L
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
+ + + G L+L PTREL+ Q+ + +GK L +GG Q L
Sbjct: 62 LLAKGHKAKSGQ-TRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKL 120
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +++V TPGR++D+V+ A K N++ LVLDEADRM DMG
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMG 163
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 67/162 (41%), Positives = 96/162 (59%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F F F +++A+ C Y TPIQ QA+PA G+D++ A+TG+GKT AF P+L
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+++ LIL PTREL+ Q+ + + K N SV+ YGG Q++ L+
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GA+I+V TPGR+++ + L+ V FLVLDEADRM DMG
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMG 164
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/170 (40%), Positives = 101/170 (59%)
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
++F G L+ L + EY PTPIQA+A+P+ +GRD+I A TGSGKT F PML
Sbjct: 8 ATFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPML 67
Query: 227 VHIMDQ----KELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN--LSVVCCYGGGSK 280
+ + + G+ GL+L PTREL++Q+ + K + +N + + +GG S
Sbjct: 68 QKLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSV 127
Query: 281 WDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
Q AL G +I+V TPGR++D++ A KL++V LVLDEADRM +G
Sbjct: 128 NIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLG 177
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 64/153 (41%), Positives = 92/153 (60%)
Query: 178 LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP 237
++KA+ C YT PTP+QA AVP AL D++ A+TG+GKT AF+ P L + + P
Sbjct: 12 ILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQRLSSPPQ-GP 70
Query: 238 GDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGT 297
G GP L+L PTREL+QQ+ + + +G + GG Q + L + +V T
Sbjct: 71 GRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLSAPVDFIVAT 130
Query: 298 PGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
PGR++D++ + L+R+ LVLDEADRM DMG
Sbjct: 131 PGRLVDLLDRRSLDLSRLELLVLDEADRMLDMG 163
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 324 (119.1 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 72/190 (37%), Positives = 106/190 (55%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G++ P + SF E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 144 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 203
Query: 215 SGKTGAFIWPMLVHIMDQ------KELEPGDG--------PMGLILAPTRELSQQIYNEA 260
SGKT AF+ P+L I + ++ +G P+ L+LAPTREL+ QIY EA
Sbjct: 204 SGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEA 263
Query: 261 KRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVL 320
++F + YGG Q + LE G ++V TPGR++DM++ G L+ +LVL
Sbjct: 264 RKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVL 323
Query: 321 DEADRMFDMG 330
DEADRM DMG
Sbjct: 324 DEADRMLDMG 333
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 324 (119.1 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 73/189 (38%), Positives = 104/189 (55%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G++ P + SF E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 146 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 205
Query: 215 SGKTGAFIWPMLVHIM-----DQKELEPGDG--------PMGLILAPTRELSQQIYNEAK 261
SGKT AF+ P+L I D +G P+ L+LAPTREL+ QIY EA+
Sbjct: 206 SGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 265
Query: 262 RFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLD 321
+F + YGG Q + LE G ++V TPGR++DM++ G L+ +LVLD
Sbjct: 266 KFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 325
Query: 322 EADRMFDMG 330
EADRM DMG
Sbjct: 326 EADRMLDMG 334
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 321 (118.1 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 66/164 (40%), Positives = 99/164 (60%)
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
++F FG E ++KA+ + YT PTPIQ +A+P L G D+ GVA+TG+GKT AF+ PM+
Sbjct: 4 TTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI 63
Query: 227 VHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
+ + P LIL PTREL+ Q+ +++GK L++ GG S +Q
Sbjct: 64 QRLSTGRAR--ARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETL 121
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G ++++ TPGR++D G + V L++DEADRM DMG
Sbjct: 122 LQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMG 165
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 320 (117.7 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 76/190 (40%), Positives = 112/190 (58%)
Query: 144 QEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKA-LRKC--EYTSPTPIQAQAVPA 200
+EA + K +S ADP + FDE+ + A LR+ Y PTPIQA P
Sbjct: 140 EEAYDRYIKKH-NISFADPKSSENLLPILQFDELDVSAKLREGLKNYKEPTPIQAATWPY 198
Query: 201 ALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEA 260
L+GRD++G+A+TGSGKT AF P L ++ + + P L+++PTREL+ Q Y
Sbjct: 199 LLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENL 256
Query: 261 KRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVL 320
+G NL V YGG K +Q++A + A +++GTPGR++D++ G+ ++V +LVL
Sbjct: 257 NSLIQGTNLKAVVVYGGAPKSEQARAAK-NASVIIGTPGRLLDLINDGSIDCSQVGYLVL 315
Query: 321 DEADRMFDMG 330
DEADRM D G
Sbjct: 316 DEADRMLDTG 325
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 67/165 (40%), Positives = 97/165 (58%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
V++F DE L++AL+ +T PT IQA A+P AL GRD++G A TG+GKT A++ P
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L H++D + G P LIL PTREL+ Q+ + A+ K +L + GG + + ++
Sbjct: 63 LQHLLDFPRKKSGP-PRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAE 121
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+IVV T GR++ +K V L+LDEADRM DMG
Sbjct: 122 VFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMG 166
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/163 (37%), Positives = 100/163 (61%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F F D L+KA+ + Y PT IQ Q++P L+ D++ A+TG+GKT AF P+L
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
++ + +P L+L PTREL+QQ++ +G+ ++++ YGG S Q L
Sbjct: 66 QLISVQPCKPE--LRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++G +I++ TPGR++D+++ + L+ + LV DEADRM DMG
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG 166
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/163 (37%), Positives = 100/163 (61%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F F D L+KA+ + Y PT IQ Q++P L+ D++ A+TG+GKT AF P+L
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
++ + +P L+L PTREL+QQ++ +G+ ++++ YGG S Q L
Sbjct: 66 QLISVQPCKPE--LRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISEL 123
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++G +I++ TPGR++D+++ + L+ + LV DEADRM DMG
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG 166
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 319 (117.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 70/164 (42%), Positives = 96/164 (58%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF F F +M +R C Y PTPIQAQA+P L G D+IG+A+TG+GKT A+ P++
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI- 60
Query: 228 HIMDQKELEPGDGPMG-LILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
QK L G + L+LAPTREL+ QI + G+ + YGG + Q +
Sbjct: 61 ----QKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRR 116
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L G ++VV PGR++D + G + V L++DEADRMFDMG
Sbjct: 117 LRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMG 160
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 321 (118.1 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 74/189 (39%), Positives = 106/189 (56%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G++ P + +F E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 163 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 222
Query: 215 SGKTGAFIWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAK 261
SGKT AF+ P+L I K + E G G P+ L+LAPTREL+ QIY EA+
Sbjct: 223 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 282
Query: 262 RFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLD 321
+F + YGG Q + LE G ++V TPGR++DM++ G L+ +LVLD
Sbjct: 283 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 342
Query: 322 EADRMFDMG 330
EADRM DMG
Sbjct: 343 EADRMLDMG 351
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 321 (118.1 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 74/189 (39%), Positives = 106/189 (56%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G++ P + +F E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 225
Query: 215 SGKTGAFIWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAK 261
SGKT AF+ P+L I K + E G G P+ L+LAPTREL+ QIY EA+
Sbjct: 226 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 285
Query: 262 RFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLD 321
+F + YGG Q + LE G ++V TPGR++DM++ G L+ +LVLD
Sbjct: 286 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 345
Query: 322 EADRMFDMG 330
EADRM DMG
Sbjct: 346 EADRMLDMG 354
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 313 (115.2 bits), Expect = 6.0e-28, P = 6.0e-28
Identities = 74/180 (41%), Positives = 99/180 (55%)
Query: 151 AKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGV 210
AK SG +P P SF G + L +A Y +PTPIQ+QA+P AL GRD+IG+
Sbjct: 31 AKDETQTSGEEPA-PAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGL 89
Query: 211 AKTGSGKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLS 270
A+TGSGKT AF PML +M+ + GL+LAPTREL+ QI + G +
Sbjct: 90 AETGSGKTAAFALPMLQALMEAPQTL-----FGLVLAPTRELAYQISQAFETLGSTIGVR 144
Query: 271 VVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK-MGATKLNRVTFLVLDEADRMFDM 329
GG QS AL I+V TPGR++D ++ L + +L +DEADR+ DM
Sbjct: 145 CAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDM 204
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 320 (117.7 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 75/189 (39%), Positives = 105/189 (55%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ +G + P + SF E++M + YT PTP+Q A+P RD++ A+TG
Sbjct: 169 VEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 228
Query: 215 SGKTGAFIWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAK 261
SGKT AF+ P+L I K + E G G P+ L+LAPTREL+ QIY EA+
Sbjct: 229 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 288
Query: 262 RFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLD 321
+F + YGG Q + LE G ++V TPGR++DM++ G L+ +LVLD
Sbjct: 289 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLD 348
Query: 322 EADRMFDMG 330
EADRM DMG
Sbjct: 349 EADRMLDMG 357
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 63/163 (38%), Positives = 96/163 (58%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G +VL++ + + Y PT IQ QA+P L GRD+I A+TG+GKT +F+ P+L
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
+ Q + + LIL PTREL+ Q+ + +++GK L + +GG + Q + L
Sbjct: 62 KLR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +++V TPGR++D+ A + +VLDEADRM DMG
Sbjct: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG 163
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 63/163 (38%), Positives = 96/163 (58%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF G +VL++ + + Y PT IQ QA+P L GRD+I A+TG+GKT +F+ P+L
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
+ Q + + LIL PTREL+ Q+ + +++GK L + +GG + Q + L
Sbjct: 62 KLR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +++V TPGR++D+ A + +VLDEADRM DMG
Sbjct: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG 163
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 319 (117.4 bits), Expect = 7.8e-28, P = 7.8e-28
Identities = 74/182 (40%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + +F E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 175 PPH-IENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 233
Query: 222 IWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I K + E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 234 LLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 293
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 294 VRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 329 MG 330
MG
Sbjct: 354 MG 355
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 319 (117.4 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 174 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 232
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 233 LLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 292
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 293 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 352
Query: 329 MG 330
MG
Sbjct: 353 MG 354
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 319 (117.4 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 175 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 233
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 234 LLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 293
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 329 MG 330
MG
Sbjct: 354 MG 355
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 319 (117.4 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 175 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 233
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 234 LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 293
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 329 MG 330
MG
Sbjct: 354 MG 355
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 319 (117.4 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 234
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 235 LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 329 MG 330
MG
Sbjct: 355 MG 356
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 319 (117.4 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 234
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 235 LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 329 MG 330
MG
Sbjct: 355 MG 356
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 319 (117.4 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 234
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 235 LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 329 MG 330
MG
Sbjct: 355 MG 356
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 319 (117.4 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 82/264 (31%), Positives = 137/264 (51%)
Query: 80 NPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPI-DHST-IVY-EEVEKNFYQPHE 136
N N G ++N + D + + I K K PL + D + ++Y + ++ N+ P
Sbjct: 135 NNNNG-EENKIKEEKRLDMEESDIL-KSLKTFKPLVSVKDRAKDVIYTDSIKTNWRAPRY 192
Query: 137 DIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQ 196
+ R ++ Q++R + I G D P P+++F + ++ L + P+PIQ Q
Sbjct: 193 ILER-DEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQ 251
Query: 197 AVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEP---GDGPMGLILAPTRELS 253
+P LSGRD+IG+A TGSGKT F PM++ ++++ P G+GP GLIL P+REL+
Sbjct: 252 GLPVILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELA 311
Query: 254 QQIYNEAKRFGK------GY-NLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVK 306
+Q Y+ F G+ L + GG +Q + G +++ TPGR++D++
Sbjct: 312 RQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLN 371
Query: 307 MGATKLNRVTFLVLDEADRMFDMG 330
+L LDEADR+ D+G
Sbjct: 372 KKKINFKLCKYLGLDEADRLIDLG 395
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 319 (117.4 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 218 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 276
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 277 LLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 336
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 337 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 396
Query: 329 MG 330
MG
Sbjct: 397 MG 398
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 64/164 (39%), Positives = 95/164 (57%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF + L+ L + Y PTPIQ +A+PA L+ +D++ A+TG+GKT AF P+L
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 228 HIM-DQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
+M D + L+L PTREL+ Q+ ++ KG ++ V YGG S Q
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G ++++ TPGR++D ++ GA LN++ LV DEADRM DMG
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMG 165
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 64/164 (39%), Positives = 95/164 (57%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF + L+ L + Y PTPIQ +A+PA L+ +D++ A+TG+GKT AF P+L
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 228 HIM-DQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
+M D + L+L PTREL+ Q+ ++ KG ++ V YGG S Q
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G ++++ TPGR++D ++ GA LN++ LV DEADRM DMG
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMG 165
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 317 (116.6 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 69/164 (42%), Positives = 98/164 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F G E L++AL + Y PTPIQ+ ++ ++G+DI+G A+TG+GKTGAF P+L
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGY-NLSVVCCYGGGSKWDQSKA 286
+ Q P L+LAPTREL+ Q+ + K N V+ YGG S Q A
Sbjct: 67 KVTSQTT------PQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNA 120
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G +++VGTPGR++D ++ G KL + LVLDEAD M MG
Sbjct: 121 LKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMG 164
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 317 (116.6 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 234
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 235 LLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 329 MG 330
MG
Sbjct: 355 MG 356
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 317 (116.6 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 75/182 (41%), Positives = 103/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + SF E++M + YT PTP+Q A+P RD++ A+TGSGKT AF
Sbjct: 176 PPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 234
Query: 222 IWPMLVHIMDQ---KEL----EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I + L E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 235 LLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 294
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 329 MG 330
MG
Sbjct: 355 MG 356
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 70/164 (42%), Positives = 93/164 (56%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F FG ++ L K + TPIQA A+P LSG+DI G A+TG+GKT AF+ H
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 229 IMDQKELE--PGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
++ E P +I+APTREL+ QI+N+A+ L YGG S Q
Sbjct: 71 LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G +I++GT GRIID K LN + +VLDEADRMFD+G
Sbjct: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG 174
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 70/164 (42%), Positives = 93/164 (56%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F FG ++ L K + TPIQA A+P LSG+DI G A+TG+GKT AF+ H
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 229 IMDQKELE--PGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
++ E P +I+APTREL+ QI+N+A+ L YGG S Q
Sbjct: 71 LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L+ G +I++GT GRIID K LN + +VLDEADRMFD+G
Sbjct: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG 174
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 313 (115.2 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 75/176 (42%), Positives = 105/176 (59%)
Query: 160 ADPPY-PVSSFGHFGFDEV---LMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGS 215
A P Y P +S F ++ +++A+ Y SPT IQA +PA ++G D++G+A+TG+
Sbjct: 2 AFPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGT 61
Query: 216 GKTGAFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCC 274
GKT AF PML I ++ P L+L PTREL+ Q+ R+G + L+V+
Sbjct: 62 GKTAAFAIPMLSKIDITSKV-----PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPI 116
Query: 275 YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
YGG S Q L GA++VVGTPGR+ID ++ L+RV FLVLDEAD M MG
Sbjct: 117 YGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMG 172
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 64/162 (39%), Positives = 92/162 (56%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F E +M+ + ++ TPIQ + +P +L G+D+ G A+TG+GKT AF+ +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
++ P +ILAPTREL QI +A+ G ++ YGG Q AL+
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GA++VVGTPGR+ID +K L + LV+DEADRMFDMG
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMG 164
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 307 (113.1 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 69/162 (42%), Positives = 92/162 (56%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G D L+K L + T IQ QA+P ++GRD++ +KTGSGKT AF+ PML
Sbjct: 7 FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ K D P GLIL PTREL++Q+Y E + G + + GG + DQ KAL
Sbjct: 67 SLKTKAFSAKD-PRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALA 125
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +V TPGR+ D + + L + LVLDEADRM D+G
Sbjct: 126 RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLG 167
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 307 (113.1 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 69/162 (42%), Positives = 92/162 (56%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G D L+K L + T IQ QA+P ++GRD++ +KTGSGKT AF+ PML
Sbjct: 7 FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ K D P GLIL PTREL++Q+Y E + G + + GG + DQ KAL
Sbjct: 67 SLKTKAFSAKD-PRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALA 125
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
G +V TPGR+ D + + L + LVLDEADRM D+G
Sbjct: 126 RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLG 167
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 313 (115.2 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 68/163 (41%), Positives = 97/163 (59%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F + ++ AL + + SPTPIQA A+P L GRD +G A+TG+GKT AF P+L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL-N 86
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGGSKWDQSKAL 287
++ + +P +++APTREL+ Q+ E K G+ L V+ YGG S DQ +AL
Sbjct: 87 KLNLSQYKP----QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRAL 142
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ GA IVVGTPGR+ D++ L+ +LDEAD M MG
Sbjct: 143 KSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMG 185
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 313 (115.2 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 68/163 (41%), Positives = 97/163 (59%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F + ++ AL + + SPTPIQA A+P L GRD +G A+TG+GKT AF P+L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL-N 86
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGGSKWDQSKAL 287
++ + +P +++APTREL+ Q+ E K G+ L V+ YGG S DQ +AL
Sbjct: 87 KLNLSQYKP----QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRAL 142
Query: 288 ELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ GA IVVGTPGR+ D++ L+ +LDEAD M MG
Sbjct: 143 KSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMG 185
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 305 (112.4 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 66/162 (40%), Positives = 96/162 (59%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F F D+ L+++L+ +PT IQ QA+P AL+G+D++ +KTGSGKT AF+ P L
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
++ + L D P LIL PTREL+ Q+Y++ + + GG + DQ+KAL
Sbjct: 63 VISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALA 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+V TPGRI D ++ LN + L+LDEADRM D+G
Sbjct: 122 KEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLG 163
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 305 (112.4 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 66/162 (40%), Positives = 96/162 (59%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F F D+ L+++L+ +PT IQ QA+P AL+G+D++ +KTGSGKT AF+ P L
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
++ + L D P LIL PTREL+ Q+Y++ + + GG + DQ+KAL
Sbjct: 63 VISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALA 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+V TPGRI D ++ LN + L+LDEADRM D+G
Sbjct: 122 KEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLG 163
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 305 (112.4 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 64/164 (39%), Positives = 96/164 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G L+ A+ +C Y T +Q Q +P AL G+DI+ A+TG+GKT AF P+L
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVL-- 60
Query: 229 IMDQKELEPGDGPM--GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
+Q +P D P+ L++ PTREL+ Q+ +++ + L + YGG + Q K
Sbjct: 61 --EQLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 118
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+E G +I+V TPGR+ D++ L+ VT LV+DEADRM D+G
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG 162
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 305 (112.4 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 64/164 (39%), Positives = 96/164 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G L+ A+ +C Y T +Q Q +P AL G+DI+ A+TG+GKT AF P+L
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVL-- 60
Query: 229 IMDQKELEPGDGPM--GLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
+Q +P D P+ L++ PTREL+ Q+ +++ + L + YGG + Q K
Sbjct: 61 --EQLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 118
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+E G +I+V TPGR+ D++ L+ VT LV+DEADRM D+G
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG 162
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 60/165 (36%), Positives = 97/165 (58%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+ +F D +L++A+ + ++ PT +QA+A+P AL GRD++ A TG+GKT AF+ P
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPA 61
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L +++D + G + LIL PTREL+ Q+ +A+ K L++ GG + +
Sbjct: 62 LQYLLDFPRRKAGPARI-LILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHAD 120
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L +IVV TPGR+++ + + +L+LDEADRM DMG
Sbjct: 121 ILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMG 165
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 60/165 (36%), Positives = 97/165 (58%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+ +F D +L++A+ + ++ PT +QA+A+P AL GRD++ A TG+GKT AF+ P
Sbjct: 2 IKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPA 61
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L +++D + G + LIL PTREL+ Q+ +A+ K L++ GG + +
Sbjct: 62 LQYLLDFPRRKAGPARI-LILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHAD 120
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
L +IVV TPGR+++ + + +L+LDEADRM DMG
Sbjct: 121 ILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMG 165
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 305 (112.4 bits), Expect = 6.0e-27, P = 6.0e-27
Identities = 61/165 (36%), Positives = 96/165 (58%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
++ F + ++KA+ + Y +PTPIQA A+P AL GRD++G+A+TG+GKT +F PM
Sbjct: 1 MTKFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
+ + + P L+L PTREL+ Q+ + K L+ GG S +Q
Sbjct: 61 ITLLARGRAR--ARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDA 118
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++ G ++++ TPGR++D + G L V +V+DEADRM DMG
Sbjct: 119 LIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMG 163
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 292 (107.8 bits), Expect = 6.1e-27, Sum P(2) = 6.1e-27
Identities = 66/159 (41%), Positives = 94/159 (59%)
Query: 173 GFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMD- 231
G ++KAL+ PIQ + A+ GRD+IG A+TG+GKT AF P++ I+
Sbjct: 122 GISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKF 181
Query: 232 QKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGA 291
+ G P L+LAPTREL++Q+ E + +L +C YGG Q + L G
Sbjct: 182 NAKHGRGKNPQCLVLAPTRELARQVEKEFRESAP--SLDTICLYGGTPIGQQMRELNYGI 239
Query: 292 EIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++ VGTPGRIID++K GA L+ V F+VLDEAD+M +G
Sbjct: 240 DVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVG 278
Score = 41 (19.5 bits), Expect = 6.1e-27, Sum P(2) = 6.1e-27
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 5 EYIPAPGSPSYKGNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKI 54
EY P+ + G++ S + D L GI E+ + KG +K+
Sbjct: 90 EYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKL 139
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 310 (114.2 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 73/182 (40%), Positives = 102/182 (56%)
Query: 162 PPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAF 221
PP+ + +F E++M + YT PTP+Q A+P RD++ A+TGSG T AF
Sbjct: 169 PPH-IENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAF 227
Query: 222 IWPMLVHIMDQ------KEL-EPGD-G-----PMGLILAPTRELSQQIYNEAKRFGKGYN 268
+ P+L I K + E G G P+ L+LAPTREL+ QIY EA++F
Sbjct: 228 LLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR 287
Query: 269 LSVVCCYGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD 328
+ YGG Q + LE G ++V TPGR++DM++ G L+ +LVLDEADRM D
Sbjct: 288 VRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 347
Query: 329 MG 330
MG
Sbjct: 348 MG 349
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 277 (102.6 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 60/173 (34%), Positives = 100/173 (57%)
Query: 160 ADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTG 219
+ P +SF ++K + + ++T PTPIQ+ ++P AL G+DI+ A+TGSGKTG
Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182
Query: 220 AFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGG 278
A++ P++ ++ +P +IL PTREL+ Q+Y K+ N L++ GG
Sbjct: 183 AYMIPIIERLL----YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGL 238
Query: 279 SKWDQSKALELGAEIVVGTPGRIIDMVKMGAT-KLNRVTFLVLDEADRMFDMG 330
+ Q + L+ +IV+ TPGR+ID ++ + + + LV+DEADRM + G
Sbjct: 239 NLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEG 291
Score = 56 (24.8 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 16 KGNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSYYR 75
K ++D +E LD F G K+ ++E + + ++ EVK + +Y
Sbjct: 62 KKGGLKEESDDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYE 121
Query: 76 YMEENP 81
E +P
Sbjct: 122 --ESSP 125
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 277 (102.6 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 60/173 (34%), Positives = 100/173 (57%)
Query: 160 ADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTG 219
+ P +SF ++K + + ++T PTPIQ+ ++P AL G+DI+ A+TGSGKTG
Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182
Query: 220 AFIWPMLVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGG 278
A++ P++ ++ +P +IL PTREL+ Q+Y K+ N L++ GG
Sbjct: 183 AYMIPIIERLL----YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGL 238
Query: 279 SKWDQSKALELGAEIVVGTPGRIIDMVKMGAT-KLNRVTFLVLDEADRMFDMG 330
+ Q + L+ +IV+ TPGR+ID ++ + + + LV+DEADRM + G
Sbjct: 239 NLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEG 291
Score = 56 (24.8 bits), Expect = 7.5e-27, Sum P(2) = 7.5e-27
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 16 KGNNASADTDSDEDPLDAFMKGIDKEVKQEAKGVKTKKIEEVKGIRXXXXXXXXXXSYYR 75
K ++D +E LD F G K+ ++E + + ++ EVK + +Y
Sbjct: 62 KKGGLKEESDDEELALDGFGMGASKQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYE 121
Query: 76 YMEENP 81
E +P
Sbjct: 122 --ESSP 125
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 312 (114.9 bits), Expect = 8.2e-27, P = 8.2e-27
Identities = 68/165 (41%), Positives = 100/165 (60%)
Query: 167 SSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPML 226
S+F G ++ L++A+ K + +PTPIQ + +P L GRD++G+A+TGSGKT AF+ PM+
Sbjct: 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128
Query: 227 VHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
H+ K LIL+P REL+ Q K F KG +L V GG S +Q
Sbjct: 129 EHL---KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSL 185
Query: 287 LELGAEIVVGTPGRIIDM-VKMGATKLNRVTFLVLDEADRMFDMG 330
L +IVV TPGR + + V+M +L+ + ++V DEADR+F+MG
Sbjct: 186 LSGKPDIVVATPGRFLHLKVEM-KLELSSIEYVVFDEADRLFEMG 229
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 302 (111.4 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 63/162 (38%), Positives = 95/162 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G ++KA+ + Y +P+PIQ QA+PA L+G+D++ A+TG+GKT F P+L
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ ++ LIL PTREL+ QI + +G+ L +GG Q + +
Sbjct: 63 LAKGPKVRANQ-VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMC 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GA+I+V TPGR++D+ A K +++ LVLDEADRM DMG
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG 163
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 302 (111.4 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 63/162 (38%), Positives = 95/162 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F G ++KA+ + Y +P+PIQ QA+PA L+G+D++ A+TG+GKT F P+L
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 229 IMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALE 288
+ ++ LIL PTREL+ QI + +G+ L +GG Q + +
Sbjct: 63 LAKGPKVRANQ-VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMC 121
Query: 289 LGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
GA+I+V TPGR++D+ A K +++ LVLDEADRM DMG
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG 163
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 292 (107.8 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 70/172 (40%), Positives = 103/172 (59%)
Query: 175 DEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM--DQ 232
+E+L+ ++K Y TPIQ ++ ++ D+IGVA+TGSGKT ++ P++ H++ D
Sbjct: 370 NELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDP 429
Query: 233 KE---LEPGDG-----------PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGG 278
+ E + P+ LILAPTREL+ QI+ +AK+F + V YGG
Sbjct: 430 PKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGN 489
Query: 279 SKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ Q L+ GA+I+V TPGR+ D+++ G KL TFLVLDEADRM DMG
Sbjct: 490 NIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541
Score = 47 (21.6 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 72 SYYRYMEENPNAGLQDNDSDVDLEYDEDGN 101
SY Y+++N N N+ + YD GN
Sbjct: 142 SYMNYVDKNNNPENMKNNFGNNKYYDNQGN 171
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 292 (107.8 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 70/172 (40%), Positives = 103/172 (59%)
Query: 175 DEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIM--DQ 232
+E+L+ ++K Y TPIQ ++ ++ D+IGVA+TGSGKT ++ P++ H++ D
Sbjct: 370 NELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDP 429
Query: 233 KE---LEPGDG-----------PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGG 278
+ E + P+ LILAPTREL+ QI+ +AK+F + V YGG
Sbjct: 430 PKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGN 489
Query: 279 SKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
+ Q L+ GA+I+V TPGR+ D+++ G KL TFLVLDEADRM DMG
Sbjct: 490 NIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541
Score = 47 (21.6 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 72 SYYRYMEENPNAGLQDNDSDVDLEYDEDGN 101
SY Y+++N N N+ + YD GN
Sbjct: 142 SYMNYVDKNNNPENMKNNFGNNKYYDNQGN 171
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 305 (112.4 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 77/209 (36%), Positives = 111/209 (53%)
Query: 126 EVEKNFYQPHEDIARLTPQEAQELRAKSGITVS----GADPPYPVSSFGHFGFDEVLMKA 181
E EK + T ++ + L++KS TVS + SF L++A
Sbjct: 36 EAEKEGGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQA 95
Query: 182 LRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPGDGP 241
+ Y+ PTPIQ++A+P AL G DIIG+A+TGSGKT AF P+L + +E P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQE--PY--- 150
Query: 242 MGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKALELGAEIVVGTPGRI 301
ILAPTREL+QQI G + C GG + DQ++ L I++ TPGR+
Sbjct: 151 YACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRL 210
Query: 302 IDMVK-MGATKLNRVTFLVLDEADRMFDM 329
+D ++ L ++ FLV+DEADR+ DM
Sbjct: 211 MDHLENTKGFSLRKLKFLVMDEADRLLDM 239
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 310 (114.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 70/171 (40%), Positives = 95/171 (55%)
Query: 165 PVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWP 224
P +F E + K + Y+ TPIQ A+P G DI+ A+TGSGKT AF+ P
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 225 MLVHIMDQKELEP-GDG---PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSK 280
++ ++D L G+G P +IL PTREL+ QIYNE ++F + + YGG +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 281 WDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD-MG 330
+E GA I+VGT GRI + G KL++ F VLDEADRM D MG
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMG 509
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 310 (114.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 70/171 (40%), Positives = 95/171 (55%)
Query: 165 PVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWP 224
P +F E + K + Y+ TPIQ A+P G DI+ A+TGSGKT AF+ P
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 225 MLVHIMDQKELEP-GDG---PMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSK 280
++ ++D L G+G P +IL PTREL+ QIYNE ++F + + YGG +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 281 WDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFD-MG 330
+E GA I+VGT GRI + G KL++ F VLDEADRM D MG
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMG 509
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 65/164 (39%), Positives = 96/164 (58%)
Query: 169 FGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVH 228
F F +++AL K + + TPIQA A+P L+GRD+ G A+TG+GKT AF+ +
Sbjct: 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70
Query: 229 IMDQKELEPG--DGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKA 286
++ + + P LI+APTREL+ QI+ +A+ + L + YGG Q K
Sbjct: 71 LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
LE G +I++GT GR+ID K L + +VLDEADRM+D+G
Sbjct: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLG 174
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 61/166 (36%), Positives = 94/166 (56%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+S F F E ++ + Y PTPIQ + +PA ++G D++G+A+TG+GKT AF P
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLP- 59
Query: 226 LVHIMDQKELE-PGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQS 284
+++ + +++ LIL PTREL+ QI + G L YGG + Q
Sbjct: 60 IINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQV 119
Query: 285 KALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
++ELG +I+V TPGR++D+++ G + VLDEAD M DMG
Sbjct: 120 DSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMG 165
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 309 (113.8 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 65/164 (39%), Positives = 98/164 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
SF FG + ++ + K Y PTPIQ + +P + GRD++G+A+TGSGKT AF+ P++
Sbjct: 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIE 159
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSKAL 287
+ K +PG G +IL+P+REL+ Q Y + K F G NL + GG S + +
Sbjct: 160 RL---KSRQPG-GVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKM 215
Query: 288 ELGAEIVVGTPGRIIDM-VKMGATKLNRVTFLVLDEADRMFDMG 330
+I+V TPGR + + V+M L V ++V DEADR+F+MG
Sbjct: 216 MTKPDIIVCTPGRFLHLKVEM-QYDLMTVQYIVFDEADRLFEMG 258
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 46/163 (28%), Positives = 77/163 (47%)
Query: 76 YMEENPNAGLQDNDSDVDLEYDEDGNPIAPKKSKYIDPLPPIDHSTIVYEEVEKNFYQPH 135
Y + + N G D + + +++ +P KKSK P P S + + E N
Sbjct: 21 YSDSSSNEGEDFQDEIIPSDDEKEPSPPPKKKSK---PNPQAFPS-LELSDNEGNNDDDD 76
Query: 136 EDIARLTPQEAQELRAKSGITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQA 195
+D +++ + T A SF FG + ++ + K Y PTPIQ
Sbjct: 77 DDDSKIN-----SYFINNNPTAKKAK----AGSFASFGLTKFILANIAKKGYKQPTPIQR 127
Query: 196 QAVPAALSGRDIIGVAKTGSGKTGAFIWPMLVHIMDQKELEPG 238
+ +P + GRD++G+A+TGSGKT AF+ P++ + K +PG
Sbjct: 128 KTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERL---KSRQPG 167
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 305 (112.4 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 70/164 (42%), Positives = 98/164 (59%)
Query: 168 SFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPMLV 227
+F G E L+ A+ +TS T IQA +P L+G+D++G A+TG+GKT AF P L
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALA 75
Query: 228 HIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYN-LSVVCCYGGGSKWDQSKA 286
I D + P ++LAPTREL+ Q+ + FGK L V YGG S Q +
Sbjct: 76 KI-DTSIKK----PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQ 130
Query: 287 LELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
LE GA++VVGTPGR++D ++ + KL+ + VLDEAD M +MG
Sbjct: 131 LERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMG 174
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 305 (112.4 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 74/191 (38%), Positives = 108/191 (56%)
Query: 155 ITVSGADPPYPVSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTG 214
+ VSG D PV+ F + L++ ++ YT PTP+Q ++P SGRD++ A+TG
Sbjct: 158 VEVSGGDIE-PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTG 216
Query: 215 SGKTGAFIWPMLVHIMDQK------ELEPGDG-------PMGLILAPTRELSQQIYNEAK 261
SGKT F++P+L D+ + + G G P LILAPTREL QI+ E++
Sbjct: 217 SGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESR 276
Query: 262 RFGKGYNLSVVCC--YGGGSKWDQSKALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLV 319
+F Y V C YGG Q + ++ G +++ TPGR++D++ G L + FLV
Sbjct: 277 KFC--YRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLV 334
Query: 320 LDEADRMFDMG 330
LDEADRM DMG
Sbjct: 335 LDEADRMLDMG 345
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 302 (111.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 65/165 (39%), Positives = 98/165 (59%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+++F G + L++++ + TPIQA+ +P AL G+DIIG A+TG+GKT AF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L + KE G+++APTREL+ Q+ E + GK + ++ YGG Q +
Sbjct: 61 LDKVDTHKE-----SVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
AL+ I+VGTPGRI+D + +L V +VLDEAD M +MG
Sbjct: 116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMG 160
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 302 (111.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 65/165 (39%), Positives = 98/165 (59%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+++F G + L++++ + TPIQA+ +P AL G+DIIG A+TG+GKT AF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L + KE G+++APTREL+ Q+ E + GK + ++ YGG Q +
Sbjct: 61 LDKVDTHKE-----SVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
AL+ I+VGTPGRI+D + +L V +VLDEAD M +MG
Sbjct: 116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMG 160
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 302 (111.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 65/165 (39%), Positives = 98/165 (59%)
Query: 166 VSSFGHFGFDEVLMKALRKCEYTSPTPIQAQAVPAALSGRDIIGVAKTGSGKTGAFIWPM 225
+++F G + L++++ + TPIQA+ +P AL G+DIIG A+TG+GKT AF P+
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 226 LVHIMDQKELEPGDGPMGLILAPTRELSQQIYNEAKRFGKGYNLSVVCCYGGGSKWDQSK 285
L + KE G+++APTREL+ Q+ E + GK + ++ YGG Q +
Sbjct: 61 LDKVDTHKE-----SVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 286 ALELGAEIVVGTPGRIIDMVKMGATKLNRVTFLVLDEADRMFDMG 330
AL+ I+VGTPGRI+D + +L V +VLDEAD M +MG
Sbjct: 116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMG 160
WARNING: HSPs involving 585 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 330 320 0.00084 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 835
No. of states in DFA: 600 (64 KB)
Total size of DFA: 215 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.90u 0.08s 30.98t Elapsed: 00:00:23
Total cpu time: 30.95u 0.08s 31.03t Elapsed: 00:00:23
Start: Thu Aug 15 13:51:29 2013 End: Thu Aug 15 13:51:52 2013
WARNINGS ISSUED: 2