Query psy17649
Match_columns 457
No_of_seqs 150 out of 840
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 19:27:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xl7_A COT, peroxisomal carnit 100.0 9E-119 3E-123 967.2 43.1 421 34-457 9-434 (612)
2 2deb_A CPT II, carnitine O-pal 100.0 1E-114 5E-119 937.2 40.8 414 29-457 28-476 (653)
3 1t1u_A Choline O-acetyltransfe 100.0 1E-113 5E-118 929.1 41.7 412 34-457 12-440 (639)
4 1nm8_A Carnitine O-acetyltrans 100.0 4E-113 1E-117 922.2 43.8 406 39-457 8-426 (616)
5 2euc_A Hypothetical protein YF 79.7 1.5 5.1E-05 35.6 3.6 35 51-85 67-101 (130)
6 2loj_A Putative cytoplasmic pr 45.5 22 0.00074 26.0 3.7 21 215-235 37-57 (63)
7 4fqn_A Malcavernin; helical do 41.9 33 0.0011 27.2 4.5 45 55-99 16-62 (98)
8 2jra_A Protein RPA2121; domain 38.7 29 0.001 25.6 3.5 21 215-235 41-61 (67)
9 2bgh_A Vinorine synthase; VS, 31.2 37 0.0013 33.8 4.3 36 333-368 142-179 (421)
10 2rkv_A Trichothecene 3-O-acety 30.4 35 0.0012 34.2 3.9 36 333-368 139-175 (451)
11 4g22_A Hydroxycinnamoyl-COA sh 28.8 43 0.0015 33.6 4.3 37 332-368 139-177 (439)
12 2xr7_A Malonyltransferase; xen 27.7 43 0.0015 33.6 4.1 36 333-368 147-184 (453)
13 1j1d_C Troponin I, TNI; THIN f 26.4 30 0.001 29.2 2.1 35 412-446 93-128 (133)
14 2e1v_A Acyl transferase; BAHD 25.4 43 0.0015 33.7 3.5 36 333-368 152-189 (454)
15 1dpb_A Dihydrolipoyl-transacet 22.0 98 0.0033 28.6 5.0 29 342-370 209-237 (243)
16 2ii3_A Lipoamide acyltransfera 21.6 80 0.0027 29.6 4.3 28 342-369 225-252 (262)
17 3g36_A Protein DPY-30 homolog; 21.3 81 0.0028 22.3 3.2 29 85-113 15-47 (55)
No 1
>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A*
Probab=100.00 E-value=8.6e-119 Score=967.24 Aligned_cols=421 Identities=37% Similarity=0.682 Sum_probs=375.5
Q ss_pred CcCccccccCCCCCCCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHhhhcccchhhhhhhh
Q psy17649 34 DKAKTFENDEKLPSLPVPPLDVTLEKYIQSVKPFATQEELTNVQNLAKEFKNGIGQELHKSLLKKASEEKNWLSGWWEKY 113 (457)
Q Consensus 34 ~~~~t~~~q~~LPrLPvP~L~~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~g~G~~Lq~~L~~~a~~~~nwl~~~W~~~ 113 (457)
..++||++|.+|||||||+|++||+|||+||+||+|+|||++|+++|++|++|+|++||++|+++++.++|||+|||+++
T Consensus 9 ~~~~t~~~q~~LP~LPvP~L~~Tl~rYL~s~~Pl~~~ee~~~t~~~v~~F~~g~G~~Lq~~L~~~a~~~~nwl~~~W~~~ 88 (612)
T 1xl7_A 9 VEERTFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWLEEWWLNV 88 (612)
T ss_dssp --CCTTTTGGGCCCCCCCCHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSSHHHHHHH
T ss_pred ccCccccccccCCCCCCCCHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHHhhCcHHHHHHHHHHHhhcCCCchHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccccCCCCCCCccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCcccchhhhhhhcCccc
Q psy17649 114 AYLMSRDSLIPFYNMFGPNPTEELGLEYGPGKGVEHASLFCHELIKFWFLLRKEKLKPQLGTGDKPFCMHTFKKFFNTAR 193 (457)
Q Consensus 114 ~YL~~R~pl~~~sN~~~~~~~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~l~p~~~~~~~plcM~qy~~lF~t~R 193 (457)
+||++|+||++|+||+.|++++.+.+++.+..|+.|||.+|+++++|+++|++|+||| +..++.||||+||++||||||
T Consensus 89 ~YL~~R~pl~~n~n~~~p~~~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~L~p-~~~~~~PlcM~Qy~~lF~t~R 167 (612)
T 1xl7_A 89 AYLDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQLLRREKLPV-HKSGNTPLDMNQFRMLFSTCK 167 (612)
T ss_dssp HTTSCCSCHHHHTCEEEECGGGGTTCCCCTTCHHHHHHHHHHHHHHHHHHHHTTCSCC-CEETTEECCCGGGGGTSSEEE
T ss_pred hhcCCCCCeeccccccCceeeecccCCCCCccHHHHHHHHHHHHHHHHHHHHcCCcch-hhcCCccccHHHHHHhcCccc
Confidence 9999999999999998887776554555556799999999999999999999999999 999999999999999999999
Q ss_pred ccCCCCCeeEecccccCCCCCCCEEEEEECCeEEEEEEEcCCCccCCHHHHHHHHHHHHh-ccCCCCCCCccccCCCChH
Q psy17649 194 IPGEEIDSIVNYFKTEAEGSCPSHVIVQCNGHIYKMNALHKDSTPLTVGEWKHQFNSILQ-ASSKSKGSGIAALSCEPRS 272 (457)
Q Consensus 194 iP~~~~D~l~~~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~g~~~ls~~el~~~l~~I~~-~~~~~~~~~vg~LTa~~Rd 272 (457)
|||.++|++.+|+.++.|+++++||||+||||||+|+|+++| .+++++||++||+.|++ +...+.+++||+||+++||
T Consensus 168 iP~~~~D~~~~~~~~~~e~~~~~HIvV~~~g~fy~v~v~~~g-~~ls~~el~~ql~~I~~~~~~~~~~~~vg~LTt~~R~ 246 (612)
T 1xl7_A 168 VPGITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLHEG-CLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERT 246 (612)
T ss_dssp ECCSSCCEEEECCCCTTTCCCCCEEEEEETTEEEEEESEETT-EECCHHHHHHHHHHHHHHHHTSCCCCCGGGGGGSCHH
T ss_pred cCCCCCCeEEeccccccCCCCCCEEEEEECCEEEEEEEEECC-eeCCHHHHHHHHHHHHhhccccCCCCCccccccCCcH
Confidence 999999999999877666788999999999999999999888 99999999999999998 4444445799999999999
Q ss_pred HHHHHHHHHHhcChhhHHHHHHHHhccEEEEecCCCC----CCChHHHhhhhcCCCCCccccccceEEEecCCceeeecc
Q psy17649 273 KWAENRSYILQKSAKNKQLIEDIDSAMFSVSLDNTSP----TNDSEICQQLISNDYANRYADKSVAVVFFKNGASGGICE 348 (457)
Q Consensus 273 ~Wa~~r~~L~~~~~~N~~~L~~IesalFvv~LDd~~p----~~~~e~~~~~l~G~~~NRW~DKslq~IV~~nG~~g~~~E 348 (457)
.||++|++|+++++.|+++|+.||+|+||||||+..| .+..+...++|||+|.|||||||+||||++||.+|+|+|
T Consensus 247 ~WA~~R~~L~~~~~~N~~~L~~IesAlFvvcLDd~~p~~~~~~~~~~~~~~LhG~~~NRWfDKslqlIV~~nG~~G~~~E 326 (612)
T 1xl7_A 247 RWAKAREYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCD 326 (612)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHSSCEEEECCCCCCCCSSCCHHHHHHHHSSCGGGCCTTBSCEEEECTTSCEEEEEC
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHhCeEEEEeccCCCCCCCCCHHHHHHHhccCCCcceeccccceEEEecCCcEEEecc
Confidence 9999999999879999999999999999999999887 444455566999999999999999999999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhccCCccCCCCCCCCCCCCeeeeccCCHHHHHHHHHHHHHHHHHhhccceeeeeecccc
Q psy17649 349 HTPFDGMVNVTACFYVLLSLAENLATISEDKTVRGGLEAPVPLEFDTDDQITKELSRAKAEQKISRYEISAIRKAFTGFG 428 (457)
Q Consensus 349 HS~~DG~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~L~w~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~~fG 428 (457)
|||+||+++++++++|++.+.+..+.+....... .++.|++|.|++++++.+.|++|++.++++++++++.++.|++||
T Consensus 327 HS~~DG~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~~yG 405 (612)
T 1xl7_A 327 HAPYDAMVMVNIAHYVDERVLETEGRWKGSEKVR-DIPLPEELVFTVDEKILNDVSQAKAQHLKAASDLQIAASTFTSFG 405 (612)
T ss_dssp SSSCCTHHHHHHHHHHHHHHHHTTTCCCSCCCCC-CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEEEC---
T ss_pred cccccchHHHHHHHHHHHHHhhcCCccCCCCCCC-CCCCCeEEEeecCHHHHHHHHHHHHHHHHHHhhcceeEEEecCCC
Confidence 9999999999999999988765433332222222 578899999999999999999999999999999999999999999
Q ss_pred hhhhhccCCChhHHHHHHHHHHHHHHhcC
Q psy17649 429 KAEITELKLHPDSFVQMALQLAYYTIHNK 457 (457)
Q Consensus 429 k~~iK~~k~SPDafiQ~AlQLA~yr~~G~ 457 (457)
|++||++|+||||||||||||||||+||+
T Consensus 406 K~~iK~~k~SPDafvQmAlQLA~yr~~G~ 434 (612)
T 1xl7_A 406 KKLTKEEALHPDTFIQLALQLAYYRLHGR 434 (612)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCccHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999996
No 2
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=100.00 E-value=1.3e-114 Score=937.16 Aligned_cols=414 Identities=24% Similarity=0.385 Sum_probs=371.3
Q ss_pred cccCCCcCccccccCCCCCCCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhcccHHHHHHHHH--HHhhhcccch
Q psy17649 29 VLSDDDKAKTFENDEKLPSLPVPPLDVTLEKYIQSVKPFATQEELTNVQNLAKEFKNGIGQELHKSLL--KKASEEKNWL 106 (457)
Q Consensus 29 ~~~~~~~~~t~~~q~~LPrLPvP~L~~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~g~G~~Lq~~L~--~~a~~~~nwl 106 (457)
.....+..+||++|++|||||||+|++||+|||+||+||+|+|||++|+++|++|++|+|++||++|+ ++++..+|||
T Consensus 28 ~~~~~~~~~t~~~q~sLPrLPvP~L~~Tl~rYL~s~~Pll~~ee~~~t~~~v~~F~~~~G~~Lq~~L~~~~~~~~~~nwl 107 (653)
T 2deb_A 28 DYLQHSIVPTMHYQDSLPRLPIPKLEDTMKRYLNAQKPLLDDSQFRRTEALCKNFETGVGKELHAHLLAQDKQNKHTSYI 107 (653)
T ss_dssp CCSCCCSSCTTTTGGGCCBCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSCTT
T ss_pred ccccccCCccccccccCCCCCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHhccCCCCcc
Confidence 34566778999999999999999999999999999999999999999999999999999999999999 6777789999
Q ss_pred hhhhhhhccccCCCCCCccccCCCCCCCccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCccc-------------
Q psy17649 107 SGWWEKYAYLMSRDSLIPFYNMFGPNPTEELGLEYGPGKGVEHASLFCHELIKFWFLLRKEKLKPQL------------- 173 (457)
Q Consensus 107 ~~~W~~~~YL~~R~pl~~~sN~~~~~~~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~l~p~~------------- 173 (457)
++||++ |||++|+||++|+|++ +++.....+..++|+.|||.+|+++++|+++|++|+|+| +
T Consensus 108 ~~~W~~-~YL~~R~pl~~n~np~---~~~~~~~~~~~~~q~~RAA~li~s~l~f~~~l~~~~L~p-~~~~~~p~~~~~~~ 182 (653)
T 2deb_A 108 SGPWFD-MYLTARDSIVLNFNPF---MAFNPDPKSEYNDQLTRATNLTVSAVRFLKTLQAGLLEP-EVFHLNPSKSDTDA 182 (653)
T ss_dssp HHHHHH-HHHHCCSCSTTTTCCE---EEECCCSSGGGGCHHHHHHHHHHHHHHHHHHHHTTCSCC-CEEESCHHHHSSHH
T ss_pred hhHHHH-hhcCCCCCceeccccc---EEecCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCCCc-eeeccCCccccchh
Confidence 999999 8999999999999965 333333222346899999999999999999999999999 8
Q ss_pred ------------------cCCCcccchhhhhhhcCcccccCCCCCeeEecccccCCCCCCCEEEEEECCeEEEEEEE-cC
Q psy17649 174 ------------------GTGDKPFCMHTFKKFFNTARIPGEEIDSIVNYFKTEAEGSCPSHVIVQCNGHIYKMNAL-HK 234 (457)
Q Consensus 174 ------------------~~~~~plcM~qy~~lF~t~RiP~~~~D~l~~~~~~~~~~~~~~HIvVl~~g~~y~v~v~-~~ 234 (457)
..++.||||+||++||||||||+.++|++.+| ++++||||+||||||+|+|+ .+
T Consensus 183 ~~~~~~~~p~~~~~~~~~~~~~~PLcM~Qy~~lF~t~RiP~~~~D~l~~~-------~~s~HIvV~~~g~fy~v~v~d~~ 255 (653)
T 2deb_A 183 FKRLIRFVPPSLSWYGAYLVNAYPLDMSQYFRLFNSTRIPRPNRDELFTD-------TKARHLLVLRKGHFYVFDVLDQD 255 (653)
T ss_dssp HHHHHTTSCTTTHHHHHHHTTEEECCCTTGGGGSSEEEECCSSSCEEEEC-------TTCCEEEEEETTEEEEEESBCTT
T ss_pred hhhhhccCCcchhhhhhhhcCCcccccHHHHhhcCcEecCCCCCCeeEEC-------CCCCEEEEEECCEEEEEEEECCC
Confidence 67899999999999999999999999999986 35899999999999999999 67
Q ss_pred CCccCCHHHHHHHHHHHHhccCCCCCCCccccCCCChHHHHHHHHHHHhcChhhHHHHHHHHhccEEEEecCCCCCCChH
Q psy17649 235 DSTPLTVGEWKHQFNSILQASSKSKGSGIAALSCEPRSKWAENRSYILQKSAKNKQLIEDIDSAMFSVSLDNTSPTNDSE 314 (457)
Q Consensus 235 g~~~ls~~el~~~l~~I~~~~~~~~~~~vg~LTa~~Rd~Wa~~r~~L~~~~~~N~~~L~~IesalFvv~LDd~~p~~~~e 314 (457)
| .+++++||++||+.|++...++...+||+||+++||.||++|++|+ ++.|+++|+.||+|+|||||||..|.+..+
T Consensus 256 g-~~ls~~ei~~qL~~I~~~~~~~~~~~vg~LTt~~Rd~WA~~R~~L~--~~~N~~sL~~IesAlFvvcLDd~~~~~~~~ 332 (653)
T 2deb_A 256 G-NIVNPLEIQAHLKYILSDSSPVPEFPVAYLTSENRDVWAELRQKLI--FDGNEETLKKVDSAVFCLCLDDFPMKDLIH 332 (653)
T ss_dssp S-CBCCHHHHHHHHHHHHHCCCCCCSSCGGGGGGSCHHHHHHHHHHHH--HTTCHHHHHHHHHSSCEEEECSSCCCSHHH
T ss_pred C-CcCCHHHHHHHHHHHHhccccccCCCccccccCCchHHHHHHHHHh--ChhhHHHHHHHHhceEEEEecCCCCCCHHH
Confidence 8 8999999999999999832234457899999999999999999998 789999999999999999999988765556
Q ss_pred HHhhhhcCCCCCccccccceEEEecCCceeeecccCCCcchhHHHHHHHHHHHHhhccCCccCCC-CCCCCCCCCeeeec
Q psy17649 315 ICQQLISNDYANRYADKSVAVVFFKNGASGGICEHTPFDGMVNVTACFYVLLSLAENLATISEDK-TVRGGLEAPVPLEF 393 (457)
Q Consensus 315 ~~~~~l~G~~~NRW~DKslq~IV~~nG~~g~~~EHS~~DG~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~p~~L~w 393 (457)
...++|||+|.||||||++||||++||.+|+|+||||+||+++++++++|+..+........... ......+.|++|.|
T Consensus 333 ~~~~~LhG~g~NRWfDKs~qlIV~~nG~~G~n~EHS~~DG~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~~L~f 412 (653)
T 2deb_A 333 LSHTMLHGDGTNRWFDKSFNLIVAEDGTAAVHFEHSWGDGVAVLRFFNEVFRDSTQTPAITPQSQPAATNSSASVETLSF 412 (653)
T ss_dssp HHHHHHTTTSSSCCTTBSEEEEECTTCCEEEEECSTTCCSHHHHHHHHHHHHHHHHSCSSCTTCCCCCCCHHHHSEECCC
T ss_pred HHHHhccCCCccccccccceEEEecCCcEEEeccccccccHHHHHHHHHHHHHHhhCCCCCcCCCcccccCCCCCeEEEe
Confidence 66669999999999999999999999999999999999999999999999987654322211111 10012467999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhccceeeeeecccchhhhhccCCChhHHHHHHHHHHHHHHhcC
Q psy17649 394 DTDDQITKELSRAKAEQKISRYEISAIRKAFTGFGKAEITELKLHPDSFVQMALQLAYYTIHNK 457 (457)
Q Consensus 394 ~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~~fGk~~iK~~k~SPDafiQ~AlQLA~yr~~G~ 457 (457)
++++++.+.|++|++.++++++++++.++.|++|||++||++|+||||||||||||||||+||+
T Consensus 413 ~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~~~GK~~iK~~k~SPDafvQmAlQLA~yr~~G~ 476 (653)
T 2deb_A 413 NLSGALKAGITAAKEKFDTTVKTLSIDSIQFQRGGKEFLKKKQLSPDAVAQLAFQMAFLRQYGQ 476 (653)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCEEEEEEECSCCHHHHHHTTCCHHHHHHHHHHHHHHHHHSC
T ss_pred ecCHHHHHHHHHHHHHHHHHHhhcceeEEEecCCCHHHHHhCCCCchHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999996
No 3
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=100.00 E-value=1.4e-113 Score=929.13 Aligned_cols=412 Identities=28% Similarity=0.484 Sum_probs=363.3
Q ss_pred CcCccccccCCCCCCCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhc--ccHHHHHHHHHHHhhhcccchhhhhh
Q psy17649 34 DKAKTFENDEKLPSLPVPPLDVTLEKYIQSVKPFATQEELTNVQNLAKEFKN--GIGQELHKSLLKKASEEKNWLSGWWE 111 (457)
Q Consensus 34 ~~~~t~~~q~~LPrLPvP~L~~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~--g~G~~Lq~~L~~~a~~~~nwl~~~W~ 111 (457)
+..+||++|. |||||||+|++||+|||+||+||+|+|||++|+++|++|++ |.|++||++|+++++..+|||++||+
T Consensus 12 s~~~t~~~q~-LP~LPvP~L~~Tl~rYL~s~~Pll~~ee~~~t~~~v~~F~~~~G~G~~Lq~~L~~~a~~~~nwl~~~W~ 90 (639)
T 1t1u_A 12 VKASSWEELD-LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWL 90 (639)
T ss_dssp -------CTT-SCCCCCCCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHSSSTTHHHHH
T ss_pred cccccccccc-CCCCCCCCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhcCCCCcchhhHh
Confidence 4578999999 99999999999999999999999999999999999999985 56799999999999999999999999
Q ss_pred hhccccCCCCCCccccCCCCCCCccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCccc----cCCCcccchhhhhh
Q psy17649 112 KYAYLMSRDSLIPFYNMFGPNPTEELGLEYGPGKGVEHASLFCHELIKFWFLLRKEKLKPQL----GTGDKPFCMHTFKK 187 (457)
Q Consensus 112 ~~~YL~~R~pl~~~sN~~~~~~~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~l~p~~----~~~~~plcM~qy~~ 187 (457)
+++||++|+||++|+|++. ++........++|+.|||.+|+++++|+++|++|+|+| + ..++.||||+||++
T Consensus 91 ~~~YL~~R~pl~~n~np~~---~~~~~~~~~~~~q~~RAA~li~~~l~f~~~l~~~~L~p-~~~~~~~~~~PLcM~Qy~~ 166 (639)
T 1t1u_A 91 NDMYLNNRLALPVNSSPAV---IFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPT-DWAKGQLSGQPLCMKQYYR 166 (639)
T ss_dssp HHHTTTCCSCHHHHTCCEE---EECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTCSCC-TTSSSCCSSSCCCCTTGGG
T ss_pred HHhhcCCCCCceeeccceE---EecCCCCCccchHHHHHHHHHHHHHHHHHHHHcCCcCc-eeeccccCCCCCchHHHHH
Confidence 9999999999999999653 33333233346799999999999999999999999999 8 57999999999999
Q ss_pred hcCcccccCCCCCeeEecccccCCCCCCCEEEEEECCeEEEEEEEcCCCccCCHHHHHHHHHHHHh-ccCC-CCCCCccc
Q psy17649 188 FFNTARIPGEEIDSIVNYFKTEAEGSCPSHVIVQCNGHIYKMNALHKDSTPLTVGEWKHQFNSILQ-ASSK-SKGSGIAA 265 (457)
Q Consensus 188 lF~t~RiP~~~~D~l~~~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~g~~~ls~~el~~~l~~I~~-~~~~-~~~~~vg~ 265 (457)
|||||||||.++|++..|+.++ .++++||||+||||||+|+|+.+| .+++++||++||+.|++ +... +..++||+
T Consensus 167 lF~t~RiP~~~~D~~~~~~~~~--~~~s~HIvV~~~g~fy~v~v~~~g-~~ls~~el~~qL~~I~~~~~~~~~~~~~vg~ 243 (639)
T 1t1u_A 167 LFSSYRLPGHTQDTLVAQKSSI--MPEPEHVIVACCNQFFVLDVVINF-RRLSEGDLFTQLRKIVKMASNEDERLPPIGL 243 (639)
T ss_dssp TTTEEEECCSSSCEEEECCCSS--SSCCCEEEEEETTEEEEEESEETT-EECCHHHHHHHHHHHHHHHTCSTTCCCCGGG
T ss_pred hCCcEecCCCCCCeEEEecCCC--CCCCCEEEEEECCEEEEEEEeeCC-eeCCHHHHHHHHHHHHhcCCccccccCCccc
Confidence 9999999999999999986543 356899999999999999999788 99999999999999998 4321 12238999
Q ss_pred cCCCChHHHHHHHHHHHhcChhhHHHHHHHHhccEEEEecCCCC--CCChHHHhhhhcCCCC-----CccccccceEEEe
Q psy17649 266 LSCEPRSKWAENRSYILQKSAKNKQLIEDIDSAMFSVSLDNTSP--TNDSEICQQLISNDYA-----NRYADKSVAVVFF 338 (457)
Q Consensus 266 LTa~~Rd~Wa~~r~~L~~~~~~N~~~L~~IesalFvv~LDd~~p--~~~~e~~~~~l~G~~~-----NRW~DKslq~IV~ 338 (457)
|||++||.||++|++|++ ++.|+++|+.||+|+||||||+..| .+..+...++|||+|. |||||||+||||+
T Consensus 244 LTt~~R~~WA~~R~~L~~-~~~N~~sL~~IesAlFvvcLDd~~p~~~~~~~~~~~~LhG~g~~~~~~NRWfDKslqlIV~ 322 (639)
T 1t1u_A 244 LTSDGRSEWAKARTVLLK-DSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVG 322 (639)
T ss_dssp GGGSCHHHHHHHHHHHTT-SHHHHHHHHHHHTCSCEEEECCCCSSCCCHHHHHHHHHHTTSTTTTTTSCCTTBSEEEEEC
T ss_pred cccCCchHHHHHHHHHhh-CchHHHHHHHHHhcEEEEEecCCCCCCCCHHHHHHHhccCCCCCCCCCcccccccceEEEe
Confidence 999999999999999998 9999999999999999999998875 2233444559999888 9999999999999
Q ss_pred cCCceeeecccCCCcchhHHHHHHHHHHHHh--hccCCccCCCCCCCCCCCCeeeeccCCHHHHHHHHHHHHHHHHHhhc
Q psy17649 339 KNGASGGICEHTPFDGMVNVTACFYVLLSLA--ENLATISEDKTVRGGLEAPVPLEFDTDDQITKELSRAKAEQKISRYE 416 (457)
Q Consensus 339 ~nG~~g~~~EHS~~DG~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~p~~L~w~l~~~~~~~I~~a~~~~~~~~~~ 416 (457)
+||.+|+|+||||+||+++++++++|+..+. +... .... ... .++.|++|.|++++++.+.|+.|++.+++++++
T Consensus 323 ~nG~~G~~~EHS~~DG~~v~~~~~~v~~~~~~~~~~~-~~~~-~~~-~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~~ 399 (639)
T 1t1u_A 323 RDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKL-VRAD-SVS-ELPAPRRLRWKCSPETQGHLASSAEKLQRIVKN 399 (639)
T ss_dssp TTSCEEEEECSTTCCHHHHHHHHHHHHHHHTCCTTSC-SSSC-SCC-CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEecCCcccchHHHHHHHHHHHHHHhhccCCc-cCCC-ccc-CCCCCeeEEeecCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998765 3221 1111 222 678899999999999999999999999999999
Q ss_pred cceeeeeecccchhhhhccCCChhHHHHHHHHHHHHHHhcC
Q psy17649 417 ISAIRKAFTGFGKAEITELKLHPDSFVQMALQLAYYTIHNK 457 (457)
Q Consensus 417 ~~~~~~~f~~fGk~~iK~~k~SPDafiQ~AlQLA~yr~~G~ 457 (457)
+++.++.|++|||++||++|+||||||||||||||||+||+
T Consensus 400 ~~~~~~~f~~yGK~~iK~~k~SPDafvQmAlQLAyyr~~G~ 440 (639)
T 1t1u_A 400 LDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQR 440 (639)
T ss_dssp EEEEEEEECSCCHHHHHHTTCCHHHHHHHHHHHHHHHHHSS
T ss_pred cceeEEEecCCCHHHHHhCCCCchHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999996
No 4
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=100.00 E-value=3.9e-113 Score=922.18 Aligned_cols=406 Identities=28% Similarity=0.510 Sum_probs=365.6
Q ss_pred ccccCCCCCCCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhc--ccHHHHHHHHHHHhhhcccchhhhhhhhccc
Q psy17649 39 FENDEKLPSLPVPPLDVTLEKYIQSVKPFATQEELTNVQNLAKEFKN--GIGQELHKSLLKKASEEKNWLSGWWEKYAYL 116 (457)
Q Consensus 39 ~~~q~~LPrLPvP~L~~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~--g~G~~Lq~~L~~~a~~~~nwl~~~W~~~~YL 116 (457)
.++-.+|||||||+|++||+|||+||+||+|+|||++|+++|++|++ |+|++||++|+++++..+|||++||+++|||
T Consensus 8 ~~~~~~LP~LPvP~L~~Tl~rYL~sv~Pl~~~ee~~~t~~~v~eF~~~gg~G~~Lq~~L~~~a~~~~nwl~~~W~~~~YL 87 (616)
T 1nm8_A 8 HHHTDPLPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYL 87 (616)
T ss_dssp -CCCCCCCCCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTT
T ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhcCCCCcchHHhhhhhhc
Confidence 35678999999999999999999999999999999999999999987 8999999999999999999999999999999
Q ss_pred cCCCCCCccccCCCCCCCccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCcccchhhhhhhcCcccccC
Q psy17649 117 MSRDSLIPFYNMFGPNPTEELGLEYGPGKGVEHASLFCHELIKFWFLLRKEKLKPQLGTGDKPFCMHTFKKFFNTARIPG 196 (457)
Q Consensus 117 ~~R~pl~~~sN~~~~~~~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~l~p~~~~~~~plcM~qy~~lF~t~RiP~ 196 (457)
++|+||++|+|+++ +++....+..++|+.|||.+|+++++|+++|++|+|+| +..++.||||+||++|||||||||
T Consensus 88 ~~R~pl~~n~np~~---~~~~~~~~~~~~q~~rAA~li~~~l~f~~~l~~~~L~p-~~~~~~PLcM~Qy~~lF~t~RiP~ 163 (616)
T 1nm8_A 88 QYRQPVVIYSSPGV---MLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPV-EYLGGKPLCMNQYYQILSSCRVPG 163 (616)
T ss_dssp TCCSCSBTTTBCEE---ECCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-CEETTEECCCGGGGGTTTEEEECC
T ss_pred CCCCCceecccceE---EecCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCCcCh-hhcCCccccHHHHHHhcCCeecCC
Confidence 99999999999653 33333233356799999999999999999999999999 999999999999999999999999
Q ss_pred CCCCeeEecccccCCCCCCCEEEEEECCeEEEEEEE-cCCCccCCHHHHHHHHHHHHhccCCCCCCCccccCCCChHHHH
Q psy17649 197 EEIDSIVNYFKTEAEGSCPSHVIVQCNGHIYKMNAL-HKDSTPLTVGEWKHQFNSILQASSKSKGSGIAALSCEPRSKWA 275 (457)
Q Consensus 197 ~~~D~l~~~~~~~~~~~~~~HIvVl~~g~~y~v~v~-~~g~~~ls~~el~~~l~~I~~~~~~~~~~~vg~LTa~~Rd~Wa 275 (457)
.++|++..|++++ ++++||||+||||||+|+|+ .+| .+++++||++||+.|++....+...+||+||+++||.||
T Consensus 164 ~~~D~~~~~~~~~---~~s~HIvV~~~g~fy~v~v~~~~g-~~ls~~ei~~qL~~I~~~~~~~~~~~vg~LTt~~R~~WA 239 (616)
T 1nm8_A 164 PKQDTVSNFSKTK---KPPTHITVVHNYQFFELDVYHSDG-TPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWA 239 (616)
T ss_dssp SSSCEEEECTTSS---SCCCEEEEEETTEEEEEECBCTTS-CBCCHHHHHHHHHHHHHTCCCCCSCCGGGGGGSCHHHHH
T ss_pred CCCCeeEeCCCCC---CCCCEEEEEECCEEEEEEEECCCC-CCCCHHHHHHHHHHHHhcccccCCCCccccccCCchHHH
Confidence 9999999986543 45899999999999999999 688 999999999999999982222223689999999999999
Q ss_pred HHHHHHHhcChhhHHHHHHHHhccEEEEecCCCCCCC-----hHHHhhhhcCCCC-----CccccccceEEEecCCceee
Q psy17649 276 ENRSYILQKSAKNKQLIEDIDSAMFSVSLDNTSPTND-----SEICQQLISNDYA-----NRYADKSVAVVFFKNGASGG 345 (457)
Q Consensus 276 ~~r~~L~~~~~~N~~~L~~IesalFvv~LDd~~p~~~-----~e~~~~~l~G~~~-----NRW~DKslq~IV~~nG~~g~ 345 (457)
++|++|++ ++.|+++|+.||+|+||||||+..|... .+...++|||+|. |||||||+||||++||.+|+
T Consensus 240 ~~R~~L~~-~~~N~~~L~~IesAlFvvcLDd~~p~~~~~~~~~~~~~~~LhG~g~~~~~~NRWfDKslqlIV~~nG~~G~ 318 (616)
T 1nm8_A 240 KAYNTLIK-DKVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGL 318 (616)
T ss_dssp HHHHHHTT-SHHHHHHHHHHHHSSCEEEEECCCSCCCSTTHHHHHHHHHHHCSCTTTTTTSCCTTBSEEEEEETTSCEEE
T ss_pred HHHHHHhc-CchHHHHHHHHHhCeEEEEeccCCccCCCcCCHHHHHHHhccCCCCCCCCCcccccccceEEEecCCcEEE
Confidence 99999998 9999999999999999999999877422 2233449999777 99999999999999999999
Q ss_pred ecccCCCcchhHHHHHHHHHHHHhhccCCccCCCCCCCCCCCCeeeeccCCHHHHHHHHHHHHHHHHHhhccceeeeeec
Q psy17649 346 ICEHTPFDGMVNVTACFYVLLSLAENLATISEDKTVRGGLEAPVPLEFDTDDQITKELSRAKAEQKISRYEISAIRKAFT 425 (457)
Q Consensus 346 ~~EHS~~DG~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~L~w~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~ 425 (457)
|+||||+||+++++++++|+..+.+ +.+ +..... .++.|++|.|++++++.+.|++|++.++++++++++.++.|+
T Consensus 319 ~~EHS~~DG~~v~~~~~~v~~~~~~--~~~-~~~~~~-~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~~~~~~~~~f~ 394 (616)
T 1nm8_A 319 VYEHAAAEGPPIVTLLDYVIEYTKK--PEL-VRSPMV-PLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFH 394 (616)
T ss_dssp EECTTSCCHHHHHHHHHHHHHHHHS--CCC-CCCCCC-CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
T ss_pred eeccccccchHHHHHHHHHHHHhhC--CCC-CCCccC-CCCCCeEEEeecCHHHHHHHHHHHHHHHHHHhhcceeEEEec
Confidence 9999999999999999999987754 222 222222 578899999999999999999999999999999999999999
Q ss_pred ccchhhhhccCCChhHHHHHHHHHHHHHHhcC
Q psy17649 426 GFGKAEITELKLHPDSFVQMALQLAYYTIHNK 457 (457)
Q Consensus 426 ~fGk~~iK~~k~SPDafiQ~AlQLA~yr~~G~ 457 (457)
+|||++||++|+||||||||||||||||+||+
T Consensus 395 ~yGK~~iK~~k~SPDafiQmAlQLAyyr~~G~ 426 (616)
T 1nm8_A 395 HFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQ 426 (616)
T ss_dssp SCSSHHHHHTTCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCHHHHHhCCCChhHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999996
No 5
>2euc_A Hypothetical protein YFMB; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus subtilis} SCOP: a.249.1.1
Probab=79.67 E-value=1.5 Score=35.62 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhc
Q psy17649 51 PPLDVTLEKYIQSVKPFATQEELTNVQNLAKEFKN 85 (457)
Q Consensus 51 P~L~~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~ 85 (457)
-+++++|..||.++.|++|.+-++..++-+.+|+.
T Consensus 67 ~e~e~~LssYL~~LlpfvT~DM~~~S~~NAneyL~ 101 (130)
T 2euc_A 67 DEIEKKLSGYLSTLLPYVTADMFETSKANAHAFLS 101 (130)
T ss_dssp SHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 46899999999999999999999999999988853
No 6
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=45.50 E-value=22 Score=26.04 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=19.3
Q ss_pred CCEEEEEECCeEEEEEEEcCC
Q psy17649 215 PSHVIVQCNGHIYKMNALHKD 235 (457)
Q Consensus 215 ~~HIvVl~~g~~y~v~v~~~g 235 (457)
.+.|.+.|+|+.|.+.+-+.|
T Consensus 37 ~~~v~I~H~G~~Y~LR~Tr~G 57 (63)
T 2loj_A 37 DGKVIIDHNGQEYLLRKTQAG 57 (63)
T ss_dssp TCEEEEEETTEEEEEEEETTT
T ss_pred CCEEEEEeCCeEEEeEEccCC
Confidence 589999999999999998777
No 7
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=41.87 E-value=33 Score=27.23 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=34.8
Q ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHhhccc--HHHHHHHHHHHh
Q psy17649 55 VTLEKYIQSVKPFATQEELTNVQNLAKEFKNGI--GQELHKSLLKKA 99 (457)
Q Consensus 55 ~Tl~rYL~sv~Pl~s~ee~~~t~~~v~~F~~g~--G~~Lq~~L~~~a 99 (457)
+-++.|+.++++-++++|..+-..+..+|..|. -.--|+.|+...
T Consensus 16 e~lqdYM~~L~~~L~~~ElqqFA~Llr~YR~G~~I~~Fc~kLl~LyG 62 (98)
T 4fqn_A 16 ELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCINLRQLYG 62 (98)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhc
Confidence 458999999999999999999999999998764 333444444333
No 8
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=38.74 E-value=29 Score=25.62 Aligned_cols=21 Identities=5% Similarity=0.325 Sum_probs=19.2
Q ss_pred CCEEEEEECCeEEEEEEEcCC
Q psy17649 215 PSHVIVQCNGHIYKMNALHKD 235 (457)
Q Consensus 215 ~~HIvVl~~g~~y~v~v~~~g 235 (457)
.+.|.+.|+|+.|.+.+-+.|
T Consensus 41 ~~ev~I~H~G~~Y~LR~Tr~G 61 (67)
T 2jra_A 41 DREIVIAHGDDRYRLRLTSQN 61 (67)
T ss_dssp SSEEEEEETTEEEEEEECTTS
T ss_pred CCEEEEEeCCeEEEeEEccCC
Confidence 589999999999999998777
No 9
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=31.24 E-value=37 Score=33.84 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=28.8
Q ss_pred ceEEEec-CCce-eeecccCCCcchhHHHHHHHHHHHH
Q psy17649 333 VAVVFFK-NGAS-GGICEHTPFDGMVNVTACFYVLLSL 368 (457)
Q Consensus 333 lq~IV~~-nG~~-g~~~EHS~~DG~~~~~~~~~v~~~~ 368 (457)
+|+..++ +|.+ |+.+-|+.+||..+..++....+..
T Consensus 142 vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~ 179 (421)
T 2bgh_A 142 VKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATC 179 (421)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHh
Confidence 5888888 6665 9999999999999998887554433
No 10
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=30.36 E-value=35 Score=34.22 Aligned_cols=36 Identities=14% Similarity=0.063 Sum_probs=28.6
Q ss_pred ceEEEecCCce-eeecccCCCcchhHHHHHHHHHHHH
Q psy17649 333 VAVVFFKNGAS-GGICEHTPFDGMVNVTACFYVLLSL 368 (457)
Q Consensus 333 lq~IV~~nG~~-g~~~EHS~~DG~~~~~~~~~v~~~~ 368 (457)
+|+..+..|.+ |+.+-|+.+||+.+..++....+..
T Consensus 139 vQvT~~~GG~~lg~~~~H~v~Dg~g~~~Fl~awa~~~ 175 (451)
T 2rkv_A 139 LQLNFIKGGLILTVNGQHGAMDMVGQDAVIRLLSKAC 175 (451)
T ss_dssp EEEEEEBTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCceeeeeeehhccccHHHHHHHHHHHHHHh
Confidence 57777777776 9999999999999998887554433
No 11
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=28.83 E-value=43 Score=33.57 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=29.0
Q ss_pred cceEEEecC-Cce-eeecccCCCcchhHHHHHHHHHHHH
Q psy17649 332 SVAVVFFKN-GAS-GGICEHTPFDGMVNVTACFYVLLSL 368 (457)
Q Consensus 332 slq~IV~~n-G~~-g~~~EHS~~DG~~~~~~~~~v~~~~ 368 (457)
.+|+..+++ |.+ |+.+-|+.+||+.+..++....+..
T Consensus 139 ~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~ 177 (439)
T 4g22_A 139 VLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMA 177 (439)
T ss_dssp EEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHh
Confidence 378888885 554 9999999999999988887555443
No 12
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=27.74 E-value=43 Score=33.60 Aligned_cols=36 Identities=28% Similarity=0.216 Sum_probs=28.3
Q ss_pred ceEEEec-CCce-eeecccCCCcchhHHHHHHHHHHHH
Q psy17649 333 VAVVFFK-NGAS-GGICEHTPFDGMVNVTACFYVLLSL 368 (457)
Q Consensus 333 lq~IV~~-nG~~-g~~~EHS~~DG~~~~~~~~~v~~~~ 368 (457)
+|+..++ .|.+ |+.+-|+.+||..+..++....+..
T Consensus 147 vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~ 184 (453)
T 2xr7_A 147 IQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLN 184 (453)
T ss_dssp EEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHH
T ss_pred EEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHh
Confidence 5888887 5554 9999999999999998887554443
No 13
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=26.35 E-value=30 Score=29.21 Aligned_cols=35 Identities=9% Similarity=0.225 Sum_probs=20.2
Q ss_pred HHhhccceeeeeec-ccchhhhhccCCChhHHHHHH
Q psy17649 412 ISRYEISAIRKAFT-GFGKAEITELKLHPDSFVQMA 446 (457)
Q Consensus 412 ~~~~~~~~~~~~f~-~fGk~~iK~~k~SPDafiQ~A 446 (457)
.-++++...+.... .|-|--+|+.++|+|+.++..
T Consensus 93 yEI~dL~~rV~Dl~gKfkKP~LkkVr~sad~ml~al 128 (133)
T 1j1d_C 93 TEIADLTQKIFDLRGKFKRPTLRRVRISADAMMQAL 128 (133)
T ss_dssp HHHHHHHHHHHHHC--------CCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccCCCccCccccCHHHHHHHH
Confidence 34555555565554 366778899999999998863
No 14
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=25.38 E-value=43 Score=33.68 Aligned_cols=36 Identities=19% Similarity=0.059 Sum_probs=28.2
Q ss_pred ceEEEec-CCce-eeecccCCCcchhHHHHHHHHHHHH
Q psy17649 333 VAVVFFK-NGAS-GGICEHTPFDGMVNVTACFYVLLSL 368 (457)
Q Consensus 333 lq~IV~~-nG~~-g~~~EHS~~DG~~~~~~~~~v~~~~ 368 (457)
+|+..++ .|.+ |+.+-|+.+||..+..++....+..
T Consensus 152 vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~ 189 (454)
T 2e1v_A 152 VQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIA 189 (454)
T ss_dssp EEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHh
Confidence 5888887 5554 9999999999999988877554443
No 15
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=21.96 E-value=98 Score=28.56 Aligned_cols=29 Identities=10% Similarity=-0.082 Sum_probs=25.3
Q ss_pred ceeeecccCCCcchhHHHHHHHHHHHHhh
Q psy17649 342 ASGGICEHTPFDGMVNVTACFYVLLSLAE 370 (457)
Q Consensus 342 ~~g~~~EHS~~DG~~~~~~~~~v~~~~~~ 370 (457)
..++.++|-.+||...+++...+.+.+..
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 37899999999999999999988877643
No 16
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=21.62 E-value=80 Score=29.61 Aligned_cols=28 Identities=14% Similarity=-0.022 Sum_probs=24.8
Q ss_pred ceeeecccCCCcchhHHHHHHHHHHHHh
Q psy17649 342 ASGGICEHTPFDGMVNVTACFYVLLSLA 369 (457)
Q Consensus 342 ~~g~~~EHS~~DG~~~~~~~~~v~~~~~ 369 (457)
..++.++|-.+||...++++..+.+.+.
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 5689999999999999999998887764
No 17
>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens}
Probab=21.26 E-value=81 Score=22.30 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=22.4
Q ss_pred cccHHHHHHHHHHHhhhcc----cchhhhhhhh
Q psy17649 85 NGIGQELHKSLLKKASEEK----NWLSGWWEKY 113 (457)
Q Consensus 85 ~g~G~~Lq~~L~~~a~~~~----nwl~~~W~~~ 113 (457)
...++.|-+-|.+.++... .||++|+.+.
T Consensus 15 ~~V~p~L~~GL~~lak~rP~DPi~~LA~~Ll~~ 47 (55)
T 3g36_A 15 QTVVPILLQGMAVLAKERPPNPIEFLASYLLKN 47 (55)
T ss_dssp TTTHHHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 4578888888888776653 6999999874
Done!