RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17655
         (68 letters)



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus),
          heart isoform t1 [TaxId: 9913]}
          Length = 292

 Score = 38.2 bits (87), Expect = 2e-05
 Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 8/49 (16%)

Query: 10 GVALVYVGQPLDTVKVKMQT--------YPQLYSSMIDCCKKVWRDEGL 50
                   P++ VK+ +Q           + Y  +IDC  ++ +++G 
Sbjct: 17 AAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF 65



 Score = 29.7 bits (65), Expect = 0.020
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 31  PQLYSSMIDCCKKVWRDEGL 50
             +Y+  +DC +K+ +DEG 
Sbjct: 246 DIMYTGTVDCWRKIAKDEGP 265


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0399    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 249,402
Number of extensions: 8615
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 2
Length of query: 68
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 31
Effective length of database: 1,899,586
Effective search space: 58887166
Effective search space used: 58887166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.8 bits)