BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17656
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V8R9|41_DROME Protein 4.1 homolog OS=Drosophila melanogaster GN=cora PE=1 SV=1
Length = 1698
Score = 79.7 bits (195), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 20 GKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
GK +A +TLLDGSLLDV+I+RKA G D+ + +C LNL+E+DYFGLTY+ DP+ WL+
Sbjct: 29 GKPALARVTLLDGSLLDVSIDRKAIGRDVINSICAGLNLIEKDYFGLTYETPTDPRTWLD 88
Query: 80 M 80
+
Sbjct: 89 L 89
>sp|O70318|E41L2_MOUSE Band 4.1-like protein 2 OS=Mus musculus GN=Epb41l2 PE=1 SV=2
Length = 988
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 5 EIDTESAPPKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYF 64
E+ ++ A KTK + +A +TLLDG+ +E++AKG+ LFDRVC+HLNLLE+DYF
Sbjct: 198 EVASQKATKKTKTV-----LAKVTLLDGTEYSCDLEKRAKGQVLFDRVCEHLNLLEKDYF 252
Query: 65 GLTYDNKYDPQCWLE 79
GL + + + + WL+
Sbjct: 253 GLLFQDHPEQKNWLD 267
>sp|Q9WV92|E41L3_MOUSE Band 4.1-like protein 3 OS=Mus musculus GN=Epb41l3 PE=1 SV=1
Length = 929
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+TLLDGS ++++++G+ LFD+VC+HLNLLE+DYFGLTY + + + WL+
Sbjct: 122 VTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLD 174
>sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1
Length = 1005
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 5 EIDTESAPPKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYF 64
E+ E A K K K +TLLDG+ +E+ AKG+ LFD+VC+HLNLLE+DYF
Sbjct: 201 ELKAEKASQKVTK-KTKTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNLLEKDYF 259
Query: 65 GLTYDNKYDPQCWLE 79
GL + + + WL+
Sbjct: 260 GLLFQESPEQKNWLD 274
>sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2
Length = 1087
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLDGS +E++++G+ LFD+VC+HLNLLE+DYFGLTY + + + WL+
Sbjct: 114 VILLDGSEYTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLD 166
>sp|Q9H4G0|E41L1_HUMAN Band 4.1-like protein 1 OS=Homo sapiens GN=EPB41L1 PE=1 SV=2
Length = 881
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 13 PKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKY 72
P+ K K + +TLLD S + +E+ +G+ LFD VC+HLNLLE+DYFGLT+ +
Sbjct: 87 PQKIAKKYKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDAD 146
Query: 73 DPQCWLE 79
+ WL+
Sbjct: 147 SQKNWLD 153
>sp|Q9Z2H5|E41L1_MOUSE Band 4.1-like protein 1 OS=Mus musculus GN=Epb41l1 PE=1 SV=2
Length = 879
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 13 PKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKY 72
P+ K K + +TLLD S + +E+ +G+ LFD VC+HLNLLE+DYFGLT+ +
Sbjct: 87 PQKIAKKFKSAICRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDAD 146
Query: 73 DPQCWLE 79
+ WL+
Sbjct: 147 SQKNWLD 153
>sp|Q9WTP0|E41L1_RAT Band 4.1-like protein 1 OS=Rattus norvegicus GN=Epb41l1 PE=1 SV=1
Length = 879
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 13 PKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKY 72
P+ K K +TLLD S + +E+ +G+ LFD VC+HLNLLE+DYFGLT+ +
Sbjct: 87 PQKIAKKFKSATCRVTLLDASEYECEVEKHGRGQVLFDLVCEHLNLLEKDYFGLTFCDAD 146
Query: 73 DPQCWLE 79
+ WL+
Sbjct: 147 SQKNWLD 153
>sp|Q9N179|41_BOVIN Protein 4.1 OS=Bos taurus GN=EPB41 PE=2 SV=1
Length = 617
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLD ++ + +E+ AKG+DL RVC+HLNLLE DYFGL + + WL+
Sbjct: 5 VSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLD 57
>sp|P48193|41_MOUSE Protein 4.1 OS=Mus musculus GN=Epb41 PE=1 SV=2
Length = 858
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLD ++ + +E+ AKG+DL RVC+HLNLLE DYFGL + + WL+
Sbjct: 215 VSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLALWDSATSKTWLD 267
>sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4
Length = 864
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLD ++ + +E+ AKG+DL RVC+HLNLLE DYFGL + + WL+
Sbjct: 214 VSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLD 266
>sp|Q6P5H6|FRMD5_MOUSE FERM domain-containing protein 5 OS=Mus musculus GN=Frmd5 PE=2
SV=1
Length = 517
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLD S TI+R AKG+ LFD +C HLNLLE+DYFG+ + + + WLE
Sbjct: 21 VRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRHWLE 73
>sp|Q7Z6J6|FRMD5_HUMAN FERM domain-containing protein 5 OS=Homo sapiens GN=FRMD5 PE=1
SV=1
Length = 570
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLD S TI+R AKG+ LFD +C HLNLLE+DYFG+ + + + WLE
Sbjct: 21 VRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQRHWLE 73
>sp|Q6Q7P4|41_CANFA Protein 4.1 OS=Canis familiaris GN=EPB41 PE=2 SV=1
Length = 810
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLD ++ + +E+ AKG+DL RVC+HLNLLE DYFGL + + WL+
Sbjct: 215 VSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNGASKTWLD 267
>sp|P11434|41_XENLA Cytoskeletal protein 4.1 OS=Xenopus laevis GN=epb41 PE=2 SV=1
Length = 801
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 7 DTESAPPKTKPLKGKIEVAH------------ITLLDGSLLDVTIERKAKGEDLFDRVCD 54
D E P KP +G+ + +H +TLLD ++ + +E+ AKG+D+F +VC
Sbjct: 166 DVEGKEPIKKP-EGESKASHKVVRRSPNMRCKVTLLDDTVYECDLEKHAKGQDIFKKVCS 224
Query: 55 HLNLLERDYFGLTYDNKYDPQCWLE 79
HLN++E DYFGL + WL+
Sbjct: 225 HLNIVEEDYFGLAIWESPTCKVWLD 249
>sp|Q58CU2|E41L5_BOVIN Band 4.1-like protein 5 OS=Bos taurus GN=EPB41L5 PE=2 SV=1
Length = 502
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLDG+ + V + +KAKG++LFD++ HL+L+E DYFGL + + WL+
Sbjct: 47 VSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLD 99
>sp|Q9MYU8|E41L5_CANFA Band 4.1-like protein 5 OS=Canis familiaris GN=EPB41L5 PE=2 SV=1
Length = 505
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 22 IEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I ++LLDG+ + V + +KAKG++LFD++ HL+L+E DYFGL + + WL+
Sbjct: 42 IITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLD 99
>sp|Q9HCM4|E41L5_HUMAN Band 4.1-like protein 5 OS=Homo sapiens GN=EPB41L5 PE=1 SV=3
Length = 733
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 22 IEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I ++LLDG+ + V + +KAKG++LFD++ HL+L+E DYFGL + + WL+
Sbjct: 42 IITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLD 99
>sp|Q5FVG2|E41L5_RAT Band 4.1-like protein 5 OS=Rattus norvegicus GN=Epb41l5 PE=2 SV=2
Length = 731
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
++LLDG+ + V + +KAKG++LFD++ HL+L+E DYFGL + + WL+
Sbjct: 47 VSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLD 99
>sp|B2RYE5|E41LB_RAT Band 4.1-like protein 4B OS=Rattus norvegicus GN=Epb41l4b PE=2 SV=1
Length = 527
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLDG+ + V + + AKG+DLFD++ HL+L+E DYFGL + + WL+
Sbjct: 89 VFLLDGTEVSVDLPKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVTHWLD 141
>sp|Q9JMC8|E41LB_MOUSE Band 4.1-like protein 4B OS=Mus musculus GN=Epb41l4b PE=2 SV=2
Length = 527
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLDG+ + V + + AKG+DLFD++ HL+L+E DYFGL + + WL+
Sbjct: 89 VFLLDGTEVSVDLPKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVTHWLD 141
>sp|Q8BGS1|E41L5_MOUSE Band 4.1-like protein 5 OS=Mus musculus GN=Epb41l5 PE=1 SV=1
Length = 731
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 22 IEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I ++LLDG+ + V + +KAKG++LFD++ HL+L+E DYFGL + + WL+
Sbjct: 42 IITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLD 99
>sp|Q9H329|E41LB_HUMAN Band 4.1-like protein 4B OS=Homo sapiens GN=EPB41L4B PE=2 SV=2
Length = 900
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLDG+ + V + + AKG+DLFD++ HL+L+E DYFGL + + WL+
Sbjct: 89 VFLLDGTEVSVDLPKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLD 141
>sp|Q9Y4F1|FARP1_HUMAN FERM, RhoGEF and pleckstrin domain-containing protein 1 OS=Homo
sapiens GN=FARP1 PE=1 SV=1
Length = 1045
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 3 MTEIDTESAPPKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERD 62
++ ++ PP T GK+ I +LD + + ++A G+ L D VC+HLNL+E D
Sbjct: 22 ISTLERGQKPPPTP--SGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGD 79
Query: 63 YFGLTYDNKYDPQCWLEMV 81
YFGL + + WL+++
Sbjct: 80 YFGLEFPDHKKITVWLDLL 98
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMVN 82
+ HIT D +L+V ++ KA GED+ +++C + ++E DYFGL + W+ + N
Sbjct: 2 LCHITRPDSVVLEVEVDPKANGEDILNKICQKMGIIEVDYFGLQFTGTKGESLWMNLRN 60
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMVN 82
+ ++T D L++V +E KA GED ++VC L ++E DYFGL + WL + N
Sbjct: 2 LCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN 60
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMVN 82
+ ++T D L++V +E KA GED ++VC L ++E DYFGL + WL + N
Sbjct: 2 LCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN 60
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMVN 82
+ ++T D L++V +E KA GED ++VC L ++E DYFGL + WL + N
Sbjct: 2 LCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN 60
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMVN 82
+ H+T D ++++ ++ KA GED ++VC L ++E DYFGL + WL + N
Sbjct: 2 LCHVTRPDAVVMEIEVDAKANGEDCLNKVCRKLGIIEVDYFGLQFSGSKGENLWLNLRN 60
>sp|Q0P4Q4|FRMD3_XENTR FERM domain-containing protein 3 OS=Xenopus tropicalis GN=frmd3
PE=2 SV=2
Length = 600
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I LLD + + I+R KG+ L D +C+H NLLE+DYFG+ + + + WL+
Sbjct: 35 IRLLDDTEISFNIQRDTKGQFLLDYICNHYNLLEKDYFGIRFVDPEKQRHWLD 87
>sp|Q5R803|FRMD3_PONAB FERM domain-containing protein 3 OS=Pongo abelii GN=FRMD3 PE=2
SV=1
Length = 597
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I LLD S + I+R+ KG+ L D +C++ +LLE+DYFG+ Y + + WLE
Sbjct: 36 IRLLDDSEISCHIQRETKGQFLIDHICNYYSLLEKDYFGIRYVDPEKQRHWLE 88
>sp|A2A2Y4|FRMD3_HUMAN FERM domain-containing protein 3 OS=Homo sapiens GN=FRMD3 PE=2
SV=1
Length = 597
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I LLD S + I+R+ KG+ L D +C++ +LLE+DYFG+ Y + + WLE
Sbjct: 36 IRLLDDSEISCHIQRETKGQFLIDHICNYYSLLEKDYFGIRYVDPEKQRHWLE 88
>sp|Q5RAB8|FARP1_PONAB FERM, RhoGEF and pleckstrin domain-containing protein 1 OS=Pongo
abelii GN=FARP1 PE=2 SV=1
Length = 1045
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 3 MTEIDTESAPPKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERD 62
++ ++ PP T GK+ I +LD + + ++A G+ L D VC+HLNL+E D
Sbjct: 22 ISTLERGQKPPPTP--SGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGD 79
Query: 63 YFGLTYDNKYDPQCWLEMV 81
YFGL + WL+++
Sbjct: 80 YFGLECPDHKKITVWLDLL 98
>sp|Q8BHD4|FRMD3_MOUSE FERM domain-containing protein 3 OS=Mus musculus GN=Frmd3 PE=1
SV=1
Length = 595
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
I LLD S + I+R+ KG+ L + +C++ +LLE+DYFG+ Y + + WLE
Sbjct: 36 IRLLDDSEVSCHIQRETKGQFLIEYICNYYSLLEKDYFGIRYVDPEKQRHWLE 88
>sp|Q6ZUT3|FRMD7_HUMAN FERM domain-containing protein 7 OS=Homo sapiens GN=FRMD7 PE=1
SV=1
Length = 714
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMV 81
+ LD S +++K+ G+ LF+ C HLNL E++YFGL + + WLE++
Sbjct: 6 VQFLDDSQKIFVVDQKSSGKALFNLSCSHLNLAEKEYFGLEFCSHSGNNVWLELL 60
>sp|A2AD83|FRMD7_MOUSE FERM domain-containing protein 7 OS=Mus musculus GN=Frmd7 PE=1
SV=1
Length = 703
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEMV 81
+ LD S +++K+ G+ LF+ C HLNL E++YFGL + + WLE++
Sbjct: 6 VQFLDDSQKIFVVDQKSSGKALFNLSCGHLNLAEKEYFGLEFCSHSGNNVWLELL 60
>sp|Q91VS8|FARP2_MOUSE FERM, RhoGEF and pleckstrin domain-containing protein 2 OS=Mus
musculus GN=Farp2 PE=1 SV=2
Length = 1065
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 9 ESAPPKTKPLKGKIEVAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTY 68
+S P+ + +I V LLD ++ IE K G+ L +V HLNL+E DYFGL +
Sbjct: 33 QSLSPRMQEKHMRIRV---KLLDSTVELFDIEPKCDGQVLLTQVWKHLNLIECDYFGLEF 89
Query: 69 DNKYDPQCWLE 79
N WLE
Sbjct: 90 KNVQSYWIWLE 100
>sp|Q9WU22|PTN4_MOUSE Tyrosine-protein phosphatase non-receptor type 4 OS=Mus musculus
GN=Ptpn4 PE=1 SV=1
Length = 926
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTY-DNKYDPQCWLE 79
V +I LLD ++ + + +G+ L D V HL+L ERDYFGL D+ D WL+
Sbjct: 30 VCNILLLDNTVQAFRVNKHDQGQVLLDIVFKHLDLTERDYFGLQLADDSTDNPRWLD 86
>sp|Q24564|MERH_DROME Moesin/ezrin/radixin homolog 2 OS=Drosophila melanogaster GN=Mer
PE=1 SV=1
Length = 635
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 33 SLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
S L+ +E +A G+DLFD VC + L E YFGL Y + WL+M
Sbjct: 21 SELEFKLEPRASGQDLFDLVCRTIGLRESWYFGLQYVDTRSNVSWLKM 68
>sp|P52963|E41LA_MOUSE Band 4.1-like protein 4A OS=Mus musculus GN=Epb41l4a PE=2 SV=2
Length = 686
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 27 ITLLDGSLLDVT-----IERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLD S L +T I++ KG + D V H+NL+E DYFGL Y ++ WL+
Sbjct: 15 VLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFRHINLVEIDYFGLRYCDRSHQTYWLD 72
>sp|O94887|FARP2_HUMAN FERM, RhoGEF and pleckstrin domain-containing protein 2 OS=Homo
sapiens GN=FARP2 PE=1 SV=3
Length = 1054
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 27 ITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLD ++ IE K G+ L +V LNL+E DYFG+ + N WLE
Sbjct: 48 VKLLDNTMEIFDIEPKCDGQVLLTQVWKRLNLVECDYFGMEFQNTQSYWIWLE 100
>sp|Q9HCS5|E41LA_HUMAN Band 4.1-like protein 4A OS=Homo sapiens GN=EPB41L4A PE=1 SV=2
Length = 686
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 27 ITLLDGSLLDVT-----IERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLE 79
+ LLD S L +T I++ KG + D V H+NL+E DYFGL Y ++ WL+
Sbjct: 15 VLLLDESKLTLTTQQQGIKKSTKGSVVLDHVFHHVNLVEIDYFGLRYCDRSHQTYWLD 72
>sp|P29074|PTN4_HUMAN Tyrosine-protein phosphatase non-receptor type 4 OS=Homo sapiens
GN=PTPN4 PE=1 SV=1
Length = 926
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTY-DNKYDPQCWLE 79
V +I LLD ++ + + +G+ L D V HL+L E+DYFGL D+ D WL+
Sbjct: 30 VCNILLLDNTVQAFKVNKHDQGQVLLDVVFKHLDLTEQDYFGLQLADDSTDNPRWLD 86
>sp|P26045|PTN3_HUMAN Tyrosine-protein phosphatase non-receptor type 3 OS=Homo sapiens
GN=PTPN3 PE=1 SV=2
Length = 913
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 24 VAHITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTY-DNKYDPQCWLE 79
+ I LDG + + ++ G+ L D V +HL + E++YFGL + D+ D WLE
Sbjct: 30 ICSIHFLDGVVQTFKVTKQDTGQVLLDMVHNHLGVTEKEYFGLQHDDDSVDSPRWLE 86
>sp|Q8BIE6|FRM4A_MOUSE FERM domain-containing protein 4A OS=Mus musculus GN=Frmd4a PE=1
SV=2
Length = 1020
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
+ LLD L++ ++ K ++L D V H NL E++YFG+ + ++ WL++
Sbjct: 8 QVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQL 62
>sp|Q9P2Q2|FRM4A_HUMAN FERM domain-containing protein 4A OS=Homo sapiens GN=FRMD4A PE=1
SV=3
Length = 1039
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
+ LLD L++ ++ K ++L D V H NL E++YFG+ + ++ WL++
Sbjct: 23 QVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDETGHLNWLQL 77
>sp|P46662|MERL_MOUSE Merlin OS=Mus musculus GN=Nf2 PE=1 SV=2
Length = 596
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
I +D + + E K KG+DLFD VC L L E +FGL Y K D WL+M
Sbjct: 25 RIVTMDAEM-EFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIK-DTVAWLKM 77
>sp|P59750|MERL_PAPAN Merlin OS=Papio anubis GN=NF2 PE=3 SV=1
Length = 595
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
I +D + + E K KG+DLFD VC L L E +FGL Y K D WL+M
Sbjct: 25 RIVTMDAEM-EFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIK-DTVAWLKM 77
>sp|P35240|MERL_HUMAN Merlin OS=Homo sapiens GN=NF2 PE=1 SV=1
Length = 595
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
I +D + + E K KG+DLFD VC L L E +FGL Y K D WL+M
Sbjct: 25 RIVTMDAEM-EFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIK-DTVAWLKM 77
>sp|Q63648|MERL_RAT Merlin (Fragment) OS=Rattus norvegicus GN=Nf2 PE=1 SV=1
Length = 586
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 26 HITLLDGSLLDVTIERKAKGEDLFDRVCDHLNLLERDYFGLTYDNKYDPQCWLEM 80
I +D + + E K KG+DLFD VC L L E +FGL Y K D WL+M
Sbjct: 21 RIVTMDAEM-EFNCEMKWKGKDLFDLVCRTLGLRETWFFGLQYTIK-DTVAWLKM 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,038,262
Number of Sequences: 539616
Number of extensions: 1214294
Number of successful extensions: 2857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2770
Number of HSP's gapped (non-prelim): 89
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)