BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17659
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V8R9|41_DROME Protein 4.1 homolog OS=Drosophila melanogaster GN=cora PE=1 SV=1
Length = 1698
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 135/275 (49%), Gaps = 107/275 (38%)
Query: 1 MVKDREGLTRNIEEKVEDMRSGEVTVSTQVNK---------------------------- 32
+ K+ +G+T N+EE+V ++ +GEVT STQ +K
Sbjct: 1449 LTKNIDGVTHNVEEEVRNLGTGEVTYSTQEHKADATPTDLSGAYVTATAVTTRTATTHED 1508
Query: 33 ---------VEEKTVAHTTTTSGLRQEQRTVTQEVRATSTILA----------------- 66
+EEKTVA T T +Q+QR VTQEV+ T+T+ +
Sbjct: 1509 LGKNAKTEQLEEKTVATTRTHDPNKQQQRVVTQEVKTTATVTSGDQYQRRDSVSSTSSGD 1568
Query: 67 -----DNNIEGS------------------TEPGVEGT-----EETNVTTTVGEFISSQT 98
D +G+ T P VE T E+T + GE IS+QT
Sbjct: 1569 SGTPIDGPYDGASVVRTDNQKSPLFTTSATTGPHVESTRVVLGEDTPGFSGHGEIISTQT 1628
Query: 99 ISSKTRTYKTEKDGVVETRVEQKITIQSDSDSVDHDKYKTEKDGVVETRVEQKITIQSDS 158
+SSKTRT VET IT YKTE+DG+VETRVEQKITIQSD
Sbjct: 1629 VSSKTRT--------VET-----IT------------YKTERDGIVETRVEQKITIQSDG 1663
Query: 159 DSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQ 193
D +DHDKAL++AI EATAMNPD+ VEKIEIQQQ Q
Sbjct: 1664 DPIDHDKALAEAIQEATAMNPDMTVEKIEIQQQTQ 1698
>sp|Q9Y2J2|E41L3_HUMAN Band 4.1-like protein 3 OS=Homo sapiens GN=EPB41L3 PE=1 SV=2
Length = 1087
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQ 193
K G+ ETR+E++I I D+D +DHD+AL+ AI EA +PD+ V K+ + ++ +
Sbjct: 1027 KGGISETRIEKRIVITGDAD-IDHDQALAQAIKEAKEQHPDMSVTKVVVHKETE 1079
>sp|Q9WV92|E41L3_MOUSE Band 4.1-like protein 3 OS=Mus musculus GN=Epb41l3 PE=1 SV=1
Length = 929
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQ 193
K G+ ETR+E++I I D+D +DHD+AL+ AI EA +PD+ V K+ + ++ +
Sbjct: 869 KGGISETRIEKRIVITGDAD-IDHDQALAQAIKEAKEQHPDMSVTKVVVHKETE 921
>sp|Q9N179|41_BOVIN Protein 4.1 OS=Bos taurus GN=EPB41 PE=2 SV=1
Length = 617
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
K G+ ETR+E++I I D+D +DHD+ L AI EA +PD+ V K+ + Q+ + S
Sbjct: 561 KGGISETRIEKRIVITGDAD-IDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETEIS 615
>sp|P48193|41_MOUSE Protein 4.1 OS=Mus musculus GN=Epb41 PE=1 SV=2
Length = 858
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
K G+ ETR+E++I I D+D +DHD+ L AI EA +PD+ V K+ + Q+ + S
Sbjct: 802 KGGISETRIEKRIVITGDAD-IDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETEIS 856
>sp|Q6Q7P4|41_CANFA Protein 4.1 OS=Canis familiaris GN=EPB41 PE=2 SV=1
Length = 810
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
K G+ ETR+E++I I D+D +DHD+ L AI EA +PD+ V K+ + Q+ + S
Sbjct: 754 KGGISETRIEKRIVITGDAD-IDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETEIS 808
>sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4
Length = 864
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQ 191
K G+ ETR+E++I I D+D +DHD+ L AI EA +PD+ V K+ + Q+
Sbjct: 808 KGGISETRIEKRIVITGDAD-IDHDQVLVQAIKEAKEQHPDMSVTKVVVHQE 858
>sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1
Length = 1005
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 142 GVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQ 191
G+ ETR+E++I I D D +DHD+AL+ AI EA +PD+ V ++ + ++
Sbjct: 948 GISETRIEKRIVITGDGD-IDHDQALAQAIREAREQHPDMSVTRVVVHKE 996
>sp|O70318|E41L2_MOUSE Band 4.1-like protein 2 OS=Mus musculus GN=Epb41l2 PE=1 SV=2
Length = 988
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQ 190
K G+ ETR+E++I I D+ ++DHD+AL+ AI EA +PD+ V ++ + +
Sbjct: 929 KGGISETRIEKRIVITGDA-ALDHDQALAQAIREAREQHPDMSVTRVVVHK 978
>sp|P11434|41_XENLA Cytoskeletal protein 4.1 OS=Xenopus laevis GN=epb41 PE=2 SV=1
Length = 801
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 140 KDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQ 193
K G+ ET +E++I I D D +DHD+ L AI EA +PD+ V K + Q+ +
Sbjct: 747 KGGISETLIEKRIVITGDGD-LDHDQVLVQAIKEAKEQHPDMSVTKGVVHQETE 799
>sp|Q9WTP0|E41L1_RAT Band 4.1-like protein 1 OS=Rattus norvegicus GN=Epb41l1 PE=1 SV=1
Length = 879
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 142 GVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
G ETR+E++I I D D VD D+AL+ AI EA +PD+ V K + ++ S
Sbjct: 816 GFSETRIEKRIIITGDED-VDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPS 868
>sp|Q9H4G0|E41L1_HUMAN Band 4.1-like protein 1 OS=Homo sapiens GN=EPB41L1 PE=1 SV=2
Length = 881
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 142 GVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
G ETR+E++I I D D VD D+AL+ AI EA +PD+ V K + ++ S
Sbjct: 818 GFSETRIEKRIIITGDED-VDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPS 870
>sp|Q9Z2H5|E41L1_MOUSE Band 4.1-like protein 1 OS=Mus musculus GN=Epb41l1 PE=1 SV=2
Length = 879
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 142 GVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQQQNQQS 195
G ETR+E++I I D D VD D+AL+ AI EA +PD+ V K + ++ S
Sbjct: 816 GFSETRIEKRIIITGDED-VDQDQALALAIKEAKLQHPDMLVTKAVVYRETDPS 868
>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
Length = 5376
Score = 33.9 bits (76), Expect = 0.74, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 20/182 (10%)
Query: 21 SGEVTVSTQVNKV-EEKTVAHTTTTSGLRQEQRTVTQEVRATS-TILADNNIEGSTEPGV 78
+GE+T+ T+V V E T HT T+ +E T+E +T T ++ TE
Sbjct: 769 TGEITLYTEVPTVPTEVTGVHTEVTNVSPEETSVPTEETISTEVTTVSPEETTLPTEVPT 828
Query: 79 EGTEETNV----TTTVGEFISSQTISSKTRTYKTEKDGV---------VETRVEQKITIQ 125
TE TNV T+ E T+ ++ T TE GV ET V + TI
Sbjct: 829 VSTEVTNVSPEETSVPPEETILTTLYTEVPTVPTEVTGVHTEVTNVSPEETSVPTEETIS 888
Query: 126 SDSDSVDHDKYKTEKDGVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEK 185
++ +V ++ + V T + + + SV ++ + + E T ++P+ V
Sbjct: 889 TEVTTVSPEETTLPTE--VPTVSTEVTNVSPEETSVPPEETI---LTEITTVSPEETVFP 943
Query: 186 IE 187
IE
Sbjct: 944 IE 945
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 50/128 (39%)
Query: 24 VTVSTQVNKVEEKTVAHTTTTSGLRQEQRTVTQEVRATSTILADNNIEGSTEPGVEGTEE 83
+ ++T+ K EK ++++ + + + + E + E E +
Sbjct: 4111 IEINTEDEKAVEKNTEDEKAVEKNTEDEKAIEKNTEDEKAVEKNTEDEKAVEKNTEDEKA 4170
Query: 84 TNVTTTVGEFISSQTISSKTRTYKTEKDGVVETRVEQKITIQSDSDSVDHDKYKTEKDGV 143
T + + T K TE + VVE E + ++ +++ + TE + V
Sbjct: 4171 IEKNTEDEKAVEKNTEDEKAVEQNTEDEKVVEENTEDEKAVEKNTEDEKAVEKNTEDEKV 4230
Query: 144 VETRVEQK 151
VE ++E +
Sbjct: 4231 VEEKIEDE 4238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.301 0.118 0.296
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,695,224
Number of Sequences: 539616
Number of extensions: 2246069
Number of successful extensions: 10295
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 9273
Number of HSP's gapped (non-prelim): 1208
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 58 (26.9 bits)