Query psy17659
Match_columns 195
No_of_seqs 94 out of 96
Neff 2.3
Searched_HMMs 13730
Date Fri Aug 16 19:42:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17659.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17659hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vq3a_ d.284.1.1 (A:) PurS su 29.4 72 0.0052 21.0 6.7 46 142-189 39-84 (86)
2 d1qfma2 c.69.1.4 (A:431-710) P 28.7 22 0.0016 24.1 3.2 25 151-175 203-230 (280)
3 d1xhna1 b.45.1.1 (A:13-182) Ce 21.5 15 0.0011 26.7 1.2 32 150-182 100-131 (170)
4 d1auga_ c.56.4.1 (A:) Pyrrolid 19.6 15 0.0011 27.5 0.8 23 160-182 44-66 (210)
5 d1mn3a_ a.5.2.4 (A:) Vacuolar 17.7 40 0.0029 21.3 2.5 19 165-183 10-28 (54)
6 d1xg8a_ c.47.1.17 (A:) Hypothe 16.6 18 0.0013 26.3 0.7 35 150-184 51-86 (111)
7 d2ix4a1 c.95.1.1 (A:31-300) Be 14.3 22 0.0016 25.2 0.5 7 120-126 1-7 (270)
8 d2f1da2 d.14.1.9 (A:96-192) Im 12.2 53 0.0039 22.6 2.1 15 165-179 82-96 (97)
9 d1e5ma1 c.95.1.1 (A:6-255) Bet 12.2 27 0.002 24.7 0.5 7 120-126 2-8 (250)
10 d1mwpa_ d.170.2.1 (A:) N-termi 11.8 74 0.0054 22.2 2.8 21 168-188 40-60 (96)
No 1
>d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=29.41 E-value=72 Score=21.01 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=33.6
Q ss_pred ceeeEEEEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCceEEEEEe
Q psy17659 142 GVVETRVEQKITIQSDSDSVDHDKALSDAIMEATAMNPDLKVEKIEIQ 189 (195)
Q Consensus 142 gisEtRvEkRIvI~~D~d~iDhd~ala~ai~ea~~~~Pd~~v~ki~v~ 189 (195)
++..-|+=|+|.+.-|++ |.+.|..++=.-|..+--+.-++.++|.
T Consensus 39 ~v~~vr~gK~~~~~i~~~--d~e~a~~~v~~~c~~lLaNpvIE~y~i~ 84 (86)
T d1vq3a_ 39 PVKKLRLGKSIHLEVEAE--NKEKAYEIVKKACEELLVNPVVEEYEVR 84 (86)
T ss_dssp CEEEEEEEEEEEEEEECS--SHHHHHHHHHHHHHHTTSCTTTEEEEEE
T ss_pred CcceeEEEEEEEEEEccC--CHHHHHHHHHHHHHHHcCCcceeEEEEE
Confidence 578889999999999875 7777777666667666555555666654
No 2
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=28.69 E-value=22 Score=24.10 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=20.2
Q ss_pred EEEEecCCCCC---chhHHHHHHHHHHH
Q psy17659 151 KITIQSDSDSV---DHDKALSDAIMEAT 175 (195)
Q Consensus 151 RIvI~~D~d~i---Dhd~ala~ai~ea~ 175 (195)
=++||||.|+. .|-..|.+|++++.
T Consensus 203 ~LiihG~~D~~Vp~~~s~~l~~aL~~~g 230 (280)
T d1qfma2 203 MLLLTADHDDRVVPLHSLKFIATLQYIV 230 (280)
T ss_dssp EEEEEETTCCSSCTHHHHHHHHHHHHHT
T ss_pred eEEeecccCCCCCHHHHHHHHHHHHHhh
Confidence 36789998865 67778999999984
No 3
>d1xhna1 b.45.1.1 (A:13-182) Cellular repressor of E1A-stimulated genes CREG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=15 Score=26.67 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=19.0
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHhcCCCCc
Q psy17659 150 QKITIQSDSDSVDHDKALSDAIMEATAMNPDLK 182 (195)
Q Consensus 150 kRIvI~~D~d~iDhd~ala~ai~ea~~~~Pd~~ 182 (195)
-||+|.|...+++-+ +...|.+--.+.||+|+
T Consensus 100 aRlTl~G~~~~v~~~-e~~~a~~~yl~rHP~a~ 131 (170)
T d1xhna1 100 VHIMLSGTVTKVNET-EMDIAKHSLFIRHPEMK 131 (170)
T ss_dssp CEEEEEEEEEECCGG-GHHHHHHHHHHHCGGGG
T ss_pred cEEEEEEEEEECCcH-HHHHHHHHHHHHHHHHH
Confidence 378888888888644 33333332345677763
No 4
>d1auga_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=19.57 E-value=15 Score=27.46 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=15.6
Q ss_pred CCchhHHHHHHHHHHHhcCCCCc
Q psy17659 160 SVDHDKALSDAIMEATAMNPDLK 182 (195)
Q Consensus 160 ~iDhd~ala~ai~ea~~~~Pd~~ 182 (195)
|++-+.+...........+||+-
T Consensus 44 pV~~~~~~~~~~~~~~~~~p~~v 66 (210)
T d1auga_ 44 PTVFYKSLAVLREAIKKHQPDII 66 (210)
T ss_dssp CSSTTHHHHHHHHHHHHHCCSEE
T ss_pred cccHHHHHHHHHHHHHhCCCcEE
Confidence 56767766666665666789864
No 5
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.67 E-value=40 Score=21.26 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHhcCCCCce
Q psy17659 165 KALSDAIMEATAMNPDLKV 183 (195)
Q Consensus 165 ~ala~ai~ea~~~~Pd~~v 183 (195)
+...++++.-+.|+|+|-.
T Consensus 10 ~e~~e~~~~Lk~MFP~~D~ 28 (54)
T d1mn3a_ 10 NERKDTLNTLQNMFPDMDP 28 (54)
T ss_dssp HHHHHHHHHHHHHCTTSCH
T ss_pred HHHHHHHHHHHHHCCCCCH
Confidence 4556788888999999853
No 6
>d1xg8a_ c.47.1.17 (A:) Hypothetical protein SA0798 {Staphylococcus aureus [TaxId: 1280]}
Probab=16.60 E-value=18 Score=26.33 Aligned_cols=35 Identities=26% Similarity=0.419 Sum_probs=24.8
Q ss_pred EEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCceE
Q psy17659 150 QKITIQSDSDS-VDHDKALSDAIMEATAMNPDLKVE 184 (195)
Q Consensus 150 kRIvI~~D~d~-iDhd~ala~ai~ea~~~~Pd~~v~ 184 (195)
.-|-|+.+.+. .|||++++++|++---++|=..+.
T Consensus 51 ~YiDi~~~~~~~~~~~~~~ae~I~ede~FYPlV~i~ 86 (111)
T d1xg8a_ 51 TYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMN 86 (111)
T ss_dssp EEEETTTC---CCHHHHHHHHHHHTTSSCSSEEEET
T ss_pred EEEeccCCcccccHHHHHHHHHHhhccceeeEEEEC
Confidence 34678887765 489999999999987777755443
No 7
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}
Probab=14.26 E-value=22 Score=25.15 Aligned_cols=7 Identities=0% Similarity=0.515 Sum_probs=5.8
Q ss_pred eEEEEec
Q psy17659 120 QKITIQS 126 (195)
Q Consensus 120 KRIvItg 126 (195)
|||+|||
T Consensus 1 rRVvITG 7 (270)
T d2ix4a1 1 RRVVVTG 7 (270)
T ss_dssp CCEEEEE
T ss_pred CeEEEEC
Confidence 6888888
No 8
>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=12.24 E-value=53 Score=22.60 Aligned_cols=15 Identities=40% Similarity=0.616 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhcCC
Q psy17659 165 KALSDAIMEATAMNP 179 (195)
Q Consensus 165 ~ala~ai~ea~~~~P 179 (195)
|||+.|+++|.+..|
T Consensus 82 Ka~arALr~A~~idp 96 (97)
T d2f1da2 82 KAFARALRQATETDP 96 (97)
T ss_dssp HHHHHHHHHHHSBCC
T ss_pred HHHHHHHHHHhccCC
Confidence 679999999998877
No 9
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}
Probab=12.22 E-value=27 Score=24.74 Aligned_cols=7 Identities=0% Similarity=0.515 Sum_probs=5.9
Q ss_pred eEEEEec
Q psy17659 120 QKITIQS 126 (195)
Q Consensus 120 KRIvItg 126 (195)
|||+|||
T Consensus 2 ~rVaItG 8 (250)
T d1e5ma1 2 KRVVVTG 8 (250)
T ss_dssp CCEEEEE
T ss_pred CeEEEEC
Confidence 7899986
No 10
>d1mwpa_ d.170.2.1 (A:) N-terminal domain of the amyloid precursor protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.77 E-value=74 Score=22.17 Aligned_cols=21 Identities=10% Similarity=0.278 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCCCceEEEEE
Q psy17659 168 SDAIMEATAMNPDLKVEKIEI 188 (195)
Q Consensus 168 a~ai~ea~~~~Pd~~v~ki~v 188 (195)
-+-++-.+.|+|++.|+.|+=
T Consensus 40 ~~IL~YCqk~YP~l~ItNVVE 60 (96)
T d1mwpa_ 40 EGILQYCQEVYPELQITNVVE 60 (96)
T ss_dssp HHHHHHHHHHSTTSCEEEEEE
T ss_pred HHHHHHHHHHCCccCcceeEe
Confidence 456678999999999999874
Done!