Query psy1766
Match_columns 214
No_of_seqs 378 out of 2749
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 19:43:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xhb_A Polypeptide N-acetylgal 100.0 3.6E-32 1.2E-36 235.2 19.3 197 2-202 16-228 (472)
2 2d7i_A Polypeptide N-acetylgal 100.0 2.4E-31 8.3E-36 235.0 19.6 197 2-202 99-308 (570)
3 2ffu_A Ppgalnact-2, polypeptid 100.0 1.8E-30 6.2E-35 226.2 18.5 194 2-203 53-261 (501)
4 3bcv_A Putative glycosyltransf 99.9 1.1E-26 3.8E-31 183.0 14.8 117 13-137 3-120 (240)
5 1qg8_A Protein (spore coat pol 99.9 2.9E-26 9.8E-31 182.4 12.3 120 15-142 1-129 (255)
6 2z86_A Chondroitin synthase; G 99.9 9.6E-24 3.3E-28 188.1 14.6 124 13-144 373-497 (625)
7 3l7i_A Teichoic acid biosynthe 99.9 7.6E-26 2.6E-30 205.0 0.0 118 14-138 1-118 (729)
8 3ckj_A Putative uncharacterize 99.9 2.1E-23 7.2E-28 172.6 7.9 122 13-139 46-170 (329)
9 2z86_A Chondroitin synthase; G 99.9 6.9E-22 2.4E-26 176.1 14.2 126 12-144 90-216 (625)
10 4fix_A UDP-galactofuranosyl tr 99.9 5.4E-22 1.8E-26 177.4 11.4 124 13-144 178-311 (657)
11 3f1y_A Mannosyl-3-phosphoglyce 99.9 2.5E-22 8.4E-27 169.4 7.6 119 14-137 93-216 (387)
12 4hg6_A Cellulose synthase subu 99.8 9.2E-20 3.2E-24 166.6 13.1 128 11-144 136-281 (802)
13 2nxv_A ATP synthase subunits r 99.7 2.4E-17 8.3E-22 131.1 12.5 89 12-129 13-101 (249)
14 2wvl_A Mannosyl-3-phosphoglyce 99.7 1.3E-16 4.5E-21 130.1 10.9 99 15-123 53-180 (391)
15 2bo4_A Mannosylglycerate synth 99.7 5E-16 1.7E-20 130.9 11.5 113 18-136 2-127 (397)
16 2fy7_A Beta-1,4-galactosyltran 99.6 1.2E-14 4E-19 117.8 9.1 78 12-119 62-146 (287)
17 2zu9_A Mannosyl-3-phosphoglyce 99.5 1.5E-13 5.1E-18 114.7 12.6 104 15-128 51-185 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 99.4 2E-12 6.9E-17 106.8 10.8 113 15-136 2-136 (343)
19 2d0j_A Galactosylgalactosylxyl 97.3 0.0029 9.8E-08 49.3 11.2 103 13-124 1-122 (246)
20 1v84_A Galactosylgalactosylxyl 97.2 0.0012 4.2E-08 51.6 7.6 101 13-124 1-128 (253)
21 3cu0_A Galactosylgalactosylxyl 97.1 0.0038 1.3E-07 49.3 10.0 104 11-123 17-153 (281)
22 3lw6_A FI08434P, beta-4-galact 97.0 0.0033 1.1E-07 49.9 8.5 74 15-118 51-129 (287)
23 1omz_A Alpha-1,4-N-acetylhexos 96.9 0.0033 1.1E-07 50.4 7.8 114 14-136 27-140 (293)
24 3oam_A 3-deoxy-manno-octuloson 96.3 0.04 1.4E-06 43.0 10.5 88 29-130 28-119 (252)
25 3k8d_A 3-deoxy-manno-octuloson 96.2 0.028 9.6E-07 44.4 9.2 102 14-131 16-136 (264)
26 1qwj_A Cytidine monophospho-N- 95.9 0.25 8.5E-06 37.6 13.2 90 29-132 29-125 (229)
27 2c0n_A A197; thermophil protei 95.9 0.027 9.1E-07 42.3 7.1 46 89-137 36-88 (203)
28 3tqd_A 3-deoxy-manno-octuloson 95.9 0.14 4.9E-06 40.1 11.7 102 15-130 8-126 (256)
29 3tzt_A Glycosyl transferase fa 95.6 0.15 5.1E-06 40.4 11.1 121 13-138 2-135 (276)
30 1ezi_A CMP-N-acetylneuraminic 95.6 0.07 2.4E-06 40.6 8.7 88 29-130 30-125 (228)
31 1h7e_A 3-deoxy-manno-octuloson 95.3 0.54 1.8E-05 35.9 13.2 87 29-130 28-117 (245)
32 2wee_A MOBA-related protein; u 95.0 0.038 1.3E-06 40.9 5.5 95 29-138 32-130 (197)
33 3st8_A Bifunctional protein GL 95.0 0.2 7E-06 43.0 10.6 103 20-131 34-140 (501)
34 2y6p_A 3-deoxy-manno-octuloson 94.9 0.33 1.1E-05 36.8 10.7 86 29-132 28-116 (234)
35 1i52_A 4-diphosphocytidyl-2-C- 94.8 0.23 7.9E-06 37.9 9.6 98 29-138 36-137 (236)
36 2waw_A MOBA relate protein; un 94.6 0.06 2E-06 39.9 5.5 95 29-138 32-130 (199)
37 2yc3_A 2-C-methyl-D-erythritol 94.5 0.28 9.5E-06 37.1 9.3 92 29-131 33-127 (228)
38 4ecm_A Glucose-1-phosphate thy 94.4 0.86 2.9E-05 35.5 12.2 91 29-130 56-149 (269)
39 1vgw_A 4-diphosphocytidyl-2C-m 94.2 0.52 1.8E-05 35.6 10.3 91 29-131 35-133 (231)
40 4fcu_A 3-deoxy-manno-octuloson 94.2 0.63 2.2E-05 36.2 10.8 88 29-130 27-119 (253)
41 4fce_A Bifunctional protein GL 93.7 0.17 5.8E-06 42.7 7.3 88 29-129 37-126 (459)
42 3ngw_A Molybdopterin-guanine d 93.7 0.21 7.2E-06 37.7 7.1 94 25-138 24-119 (208)
43 3juk_A UDP-glucose pyrophospho 93.2 0.15 5E-06 40.2 5.7 53 77-129 95-151 (281)
44 3q80_A 2-C-methyl-D-erythritol 93.2 1.3 4.4E-05 33.9 11.0 99 29-141 36-141 (231)
45 1w55_A ISPD/ISPF bifunctional 93.2 0.86 2.9E-05 37.7 10.5 86 29-131 32-118 (371)
46 3f1c_A Putative 2-C-methyl-D-e 93.1 0.32 1.1E-05 37.5 7.4 103 29-140 33-144 (246)
47 1fxo_A Glucose-1-phosphate thy 92.9 1.1 3.9E-05 35.5 10.5 96 21-128 28-126 (293)
48 1vic_A 3-deoxy-manno-octuloson 92.9 2 7E-05 33.1 11.8 85 29-129 28-118 (262)
49 2qh5_A PMI, ALGA, mannose-6-ph 92.8 2.5 8.6E-05 33.6 12.6 87 29-126 38-128 (308)
50 1e5k_A Molybdopterin-guanine d 92.8 0.81 2.8E-05 34.1 9.1 89 29-137 34-125 (201)
51 3d5n_A Q97W15_sulso; NESG, SSR 92.6 0.094 3.2E-06 39.1 3.6 60 78-139 61-123 (197)
52 3rsb_A Adenosylcobinamide-phos 92.5 0.1 3.5E-06 38.7 3.7 90 29-129 28-119 (196)
53 2ux8_A Glucose-1-phosphate uri 92.1 0.73 2.5E-05 36.5 8.5 55 77-131 106-162 (297)
54 2vsh_A TARI, 2-C-methyl-D-eryt 92.1 1.2 4.1E-05 33.6 9.4 100 29-138 32-143 (236)
55 1lvw_A Glucose-1-phosphate thy 91.8 2.5 8.4E-05 33.6 11.3 96 20-128 28-127 (295)
56 1g9r_A Glycosyl transferase; a 91.7 0.92 3.1E-05 36.3 8.7 104 28-137 12-129 (311)
57 2xwl_A 2-C-methyl-D-erythritol 91.6 2.4 8.2E-05 31.6 10.6 89 29-130 31-122 (223)
58 2e8b_A Probable molybdopterin- 91.4 3.3 0.00011 30.6 11.4 94 12-124 10-120 (201)
59 1hm9_A GLMU, UDP-N-acetylgluco 91.2 2.4 8.1E-05 35.7 11.2 89 29-131 40-131 (468)
60 3pnn_A Conserved domain protei 91.1 2.1 7E-05 34.1 10.2 93 29-129 34-141 (303)
61 2v0h_A Bifunctional protein GL 90.9 1.3 4.4E-05 37.1 9.2 88 29-129 34-123 (456)
62 2pa4_A UTP-glucose-1-phosphate 90.3 1.1 3.6E-05 36.1 7.8 55 78-132 106-163 (323)
63 2e3d_A UTP--glucose-1-phosphat 90.2 1.7 5.7E-05 34.4 8.9 53 78-130 103-162 (302)
64 1mc3_A Glucose-1-phosphate thy 90.1 2.9 9.8E-05 33.2 10.1 95 21-128 29-127 (296)
65 2xme_A CTP-inositol-1-phosphat 88.2 2.1 7.1E-05 32.3 7.8 100 13-125 15-130 (232)
66 2i5e_A Hypothetical protein MM 84.9 5.4 0.00018 29.6 8.4 55 78-138 66-121 (211)
67 1ll2_A Glycogenin-1; protein-s 84.8 5.1 0.00017 32.4 8.7 95 14-118 1-110 (333)
68 1vpa_A 2-C-methyl-D-erythritol 83.5 4.2 0.00014 30.5 7.3 90 29-130 42-135 (234)
69 3cgx_A Putative nucleotide-dip 83.4 13 0.00045 28.4 12.4 59 78-138 76-138 (242)
70 2x65_A Mannose-1-phosphate gua 77.7 12 0.00043 30.0 8.7 94 21-125 28-123 (336)
71 4evw_A Nucleoside-diphosphate- 77.2 13 0.00044 28.6 8.3 94 21-122 25-125 (255)
72 2gak_A Beta-1,6-N-acetylglucos 77.2 13 0.00043 30.8 8.6 105 13-126 82-198 (391)
73 3u2u_A Glycogenin-1, GN-1, GN1 77.1 7.8 0.00027 30.3 7.0 95 14-118 2-111 (263)
74 1tzf_A Glucose-1-phosphate cyt 76.5 18 0.0006 27.4 8.9 50 85-135 103-154 (259)
75 3brk_X Glucose-1-phosphate ade 73.5 17 0.00058 30.0 8.6 90 30-129 46-151 (420)
76 1yp2_A Glucose-1-phosphate ade 70.9 30 0.001 28.7 9.7 94 29-129 53-161 (451)
77 2dpw_A Hypothetical protein TT 68.5 16 0.00054 27.4 6.8 85 29-138 33-118 (232)
78 1jyk_A LICC protein, CTP:phosp 66.6 19 0.00064 27.5 6.9 81 29-124 57-139 (254)
79 2px7_A 2-C-methyl-D-erythritol 58.1 11 0.00038 28.4 4.2 52 78-131 83-135 (236)
80 3rht_A (gatase1)-like protein; 55.9 69 0.0023 24.8 8.4 79 49-136 6-85 (259)
81 1s4n_A Glycolipid 2-alpha-mann 52.3 33 0.0011 27.9 6.1 65 14-83 26-90 (348)
82 2xzm_U Ribosomal protein L7AE 49.7 45 0.0015 22.7 5.8 71 49-126 43-123 (126)
83 2ggo_A 401AA long hypothetical 36.8 43 0.0015 27.2 4.7 80 29-125 32-113 (401)
84 3hgt_A HDA1 complex subunit 3; 35.1 1.1E+02 0.0038 24.6 6.7 108 29-148 112-240 (328)
85 1wd5_A Hypothetical protein TT 31.5 1.3E+02 0.0046 21.8 6.4 61 48-114 121-181 (208)
86 3mt5_A Potassium large conduct 30.0 1.8E+02 0.006 26.2 7.7 77 19-103 6-82 (726)
87 2cu2_A Putative mannose-1-phos 26.2 2.1E+02 0.007 22.7 7.0 92 21-126 29-124 (337)
88 3td9_A Branched chain amino ac 25.6 89 0.003 24.5 4.8 78 1-83 1-86 (366)
89 3izc_H 60S ribosomal protein R 25.3 1.2E+02 0.004 23.5 5.0 86 31-130 136-221 (256)
90 4ds3_A Phosphoribosylglycinami 24.5 2.2E+02 0.0074 21.1 9.4 98 13-122 4-106 (209)
91 3naf_A Calcium-activated potas 24.0 2.7E+02 0.0092 25.4 7.8 78 17-102 54-131 (798)
92 2zkr_f 60S ribosomal protein L 24.0 2.4E+02 0.008 21.9 6.5 86 31-130 140-225 (266)
93 2j0a_A Beta-1,3-N-acetylglucos 23.2 33 0.0011 26.8 1.7 36 101-136 92-127 (280)
94 3mvn_A UDP-N-acetylmuramate:L- 22.8 1.6E+02 0.0055 20.5 5.2 8 103-110 93-100 (163)
95 3o85_A Ribosomal protein L7AE; 22.0 1.8E+02 0.0062 19.4 5.1 57 49-113 50-106 (122)
96 1cxq_A Avian sarcoma virus int 21.9 1.4E+02 0.0046 20.4 4.6 73 18-99 41-117 (162)
97 1xkn_A Putative peptidyl-argin 20.5 1.2E+02 0.0042 24.6 4.5 32 18-54 295-326 (355)
98 3lfh_A Manxa, phosphotransfera 20.3 2.2E+02 0.0075 19.6 6.8 28 14-41 1-28 (144)
No 1
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=100.00 E-value=3.6e-32 Score=235.19 Aligned_cols=197 Identities=40% Similarity=0.714 Sum_probs=166.6
Q ss_pred CccccCCcCCCCCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCC-ChHHHHHHHHhhcCCC-cE
Q psy1766 2 SIICANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPS-NLHGEVETFVKGLNNG-RV 79 (214)
Q Consensus 2 ~~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d-~t~~~~~~~~~~~~~~-~v 79 (214)
...|++..|+..+|+||||||+||++++.|.+||+|+++|+++...+|||||||||+ | .+.++++++.+++ + ++
T Consensus 16 ~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~--d~~t~~~l~~~~~~~--~~~v 91 (472)
T 1xhb_A 16 LEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASE--RDFLKRPLESYVKKL--KVPV 91 (472)
T ss_dssp CGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCC--CGGGTHHHHHHHHSS--SSCE
T ss_pred ChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCC--cHHHHHHHHHHHHHC--CCcE
Confidence 467999999999999999999999977899999999999999875579999999999 6 5999999998876 5 89
Q ss_pred EEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEeeeeeecCCcceeec-CCceeee
Q psy1766 80 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTS-SALVRGG 158 (214)
Q Consensus 80 ~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~~~~~~~~~~~~~~-~~~~~g~ 158 (214)
++++.++|.|.+.|+|.|++.|+|+||+|+|+|+.+.|+||+.+++.+.+++..+++|.++.++.+++.+.. .....|+
T Consensus 92 ~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 171 (472)
T 1xhb_A 92 HVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGG 171 (472)
T ss_dssp EEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEE
T ss_pred EEEECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccce
Confidence 999999999999999999999999999999999999999999999999999999999999999988887753 4566889
Q ss_pred eEecccceeecCCccccCCC------CCCCCCCCCccc-------hhcccccccccc
Q psy1766 159 FNWGLHFKWENLPKVKTSSN------PSYLPLQYTSSA-------LVRGGFNWGLHF 202 (214)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~ggf~~~~~~ 202 (214)
++|.+.+.|..++....... ....|...++++ ..+||||..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~ 228 (472)
T 1xhb_A 172 FNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDI 228 (472)
T ss_dssp ECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCT
T ss_pred eeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccc
Confidence 99999999987765322111 111133444443 389999998865
No 2
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.98 E-value=2.4e-31 Score=234.96 Aligned_cols=197 Identities=39% Similarity=0.684 Sum_probs=164.5
Q ss_pred CccccCCcCCCCCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCCh-HHHHHHHHhhcCCCcEE
Q psy1766 2 SIICANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL-HGEVETFVKGLNNGRVH 80 (214)
Q Consensus 2 ~~~~~~~~~~~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t-~~~~~~~~~~~~~~~v~ 80 (214)
...|+...|++.+|+||||||+||++++.|.+||.|+++|++++..+|||||||||+ |.+ .++++++..++ ++|+
T Consensus 99 ~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~--D~tl~~~l~~~~~~~--~~v~ 174 (570)
T 2d7i_A 99 HPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSD--REHLKKPLEDYMALF--PSVR 174 (570)
T ss_dssp CGGGGTCCEESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCC--CGGGTHHHHHHHTTS--TTEE
T ss_pred CccceecccCCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCC--cHHHHHHHHHHHHhC--CeEE
Confidence 346888888889999999999999976899999999999998874469999999999 788 89999998875 7999
Q ss_pred EEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEeeeeeecCCcceeec--CCceeee
Q psy1766 81 LYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTS--SALVRGG 158 (214)
Q Consensus 81 ~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~~~~~~~~~~~~~~--~~~~~g~ 158 (214)
+++.++|.|.+.|+|.|++.|+|+||+|+|+|+.+.|+||+.+++.+.+++..+++|.++.++.+++.+.. .....++
T Consensus 175 vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (570)
T 2d7i_A 175 ILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGA 254 (570)
T ss_dssp EEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEE
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888765 3446788
Q ss_pred eEecccceeecCCcc-ccCCCCC-C-CCCCCCccch-------hcccccccccc
Q psy1766 159 FNWGLHFKWENLPKV-KTSSNPS-Y-LPLQYTSSAL-------VRGGFNWGLHF 202 (214)
Q Consensus 159 ~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~-------~~ggf~~~~~~ 202 (214)
+.|.+.+.+...... ....... + .+...+++++ .+||||..+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~ 308 (570)
T 2d7i_A 255 FDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEI 308 (570)
T ss_dssp ECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCS
T ss_pred ccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccc
Confidence 999988888766543 1111111 1 1334444433 89999998764
No 3
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.97 E-value=1.8e-30 Score=226.18 Aligned_cols=194 Identities=40% Similarity=0.678 Sum_probs=158.2
Q ss_pred CccccCCcCCCCCCceEEEEEEeCCCch-HHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEE
Q psy1766 2 SIICANQTFPSTLPSTSVIICFYNEHPA-TLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVH 80 (214)
Q Consensus 2 ~~~~~~~~~~~~~p~vSVIIp~~n~~~~-~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~ 80 (214)
...|+...|+..+|+||||||+||++ . .|.+||+|+++|+++...+|||||||||+ |.+.+.+ .++. ++++
T Consensus 53 ~~~~~~~~~~~~~p~vSVIIp~yN~~-~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~--D~t~~~~---~~~~--~~v~ 124 (501)
T 2ffu_A 53 HDQCQRKQWRVDLPATSVVITFHNEA-RSALLRTVVSVLKKSPPHLIKEIILVDDYSN--DPEDGAL---LGKI--EKVR 124 (501)
T ss_dssp CGGGGGCCCCSSCCCEEEEEEESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCS--CTHHHHG---GGGB--TTEE
T ss_pred hhHhccccCCcCCCCEEEEEEeCcCc-HHHHHHHHHHHHhhCchhhceeEEEEECCCC--chHHHHH---HhcC--CCEE
Confidence 45688888999999999999999999 7 99999999999998764469999999999 7774332 3343 7899
Q ss_pred EEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEeeeeeecCCcceeec-CCceeeee
Q psy1766 81 LYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTS-SALVRGGF 159 (214)
Q Consensus 81 ~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~~~~~~~~~~~~~~-~~~~~g~~ 159 (214)
+++.++|.|.+.|+|.|++.|+|+||+|+|+|+.++|+||+.+++.+.+++..+++|.++.++.+++.+.+ .....|++
T Consensus 125 vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (501)
T 2ffu_A 125 VLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGF 204 (501)
T ss_dssp EEECSSCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEE
T ss_pred EEECCCCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEe
Confidence 99999999999999999999999999999999999999999999999988888999999999998888764 34567889
Q ss_pred EecccceeecCCccccCCCC-----C-CCCCCCCcc-------chhccccccccccc
Q psy1766 160 NWGLHFKWENLPKVKTSSNP-----S-YLPLQYTSS-------ALVRGGFNWGLHFK 203 (214)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~-------~~~~ggf~~~~~~~ 203 (214)
.|.+.+.|..++........ . ..|...+++ +..+||||..+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~ 261 (501)
T 2ffu_A 205 DWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVW 261 (501)
T ss_dssp CTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSS
T ss_pred eecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCcccccc
Confidence 99999999877654221110 0 113333333 33899999988653
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.94 E-value=1.1e-26 Score=183.04 Aligned_cols=117 Identities=27% Similarity=0.313 Sum_probs=106.8
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHH
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIR 92 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~ 92 (214)
.+|+||||||+||++ +.|.+||+|+++|++++ +|||||||||+ |+|.++++++..++ +++++++ .+|.|.+.
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~--d~t~~~~~~~~~~~--~~i~~i~-~~n~G~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSD--IEIILIDDESP--DNCPKICDDYAAQY--PNIKVIH-KKNAGLGM 74 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCS--SSHHHHHHHHHHHC--SSEEEEE-CCCCCHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCC--cCHHHHHHHHHhhC--CCEEEEE-CCCCChHH
Confidence 468999999999999 99999999999999987 79999999999 89999999998885 7899998 57999999
Q ss_pred HHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhc-CCCEEEEe
Q psy1766 93 ARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAE-RTNTVTVP 137 (214)
Q Consensus 93 a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~vv~~ 137 (214)
|+|.|++.|+|+||+|+|+|+.+.|++|+.+++.+.+ +.++++++
T Consensus 75 a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 75 ACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999999999999999999999999976 55555543
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.94 E-value=2.9e-26 Score=182.38 Aligned_cols=120 Identities=18% Similarity=0.289 Sum_probs=107.8
Q ss_pred CceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC--------C
Q psy1766 15 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS--------K 86 (214)
Q Consensus 15 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~--------~ 86 (214)
|+||||||+||++ +.|.+||+|+++|++++ +|||||||||+ |+|.++++++.. ++++++++.+ +
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~--d~t~~~~~~~~~---~~~i~~i~~~~~~~~~~~~ 72 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSN--EETLNVIRPFLN---DNRVRFYQSDISGVKERTE 72 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCC--HHHHHHHGGGGG---STTEEEEECCCCSHHHHHS
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCC--chHHHHHHHHhh---cCCEEEEeccccccccccc
Confidence 6899999999999 99999999999999987 79999999999 899999998865 3789999988 7
Q ss_pred CcchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcC-CCEEEEeeeeee
Q psy1766 87 REGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAER-TNTVTVPIIDII 142 (214)
Q Consensus 87 ~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~vv~~~~~~~ 142 (214)
|.|.+.|+|.|++.|+|+||+|+|+|+.+.|++|+.+++.+.++ ...++++....+
T Consensus 73 n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 129 (255)
T 1qg8_A 73 KTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY 129 (255)
T ss_dssp SCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE
Confidence 99999999999999999999999999999999999999999765 445555555444
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.91 E-value=9.6e-24 Score=188.09 Aligned_cols=124 Identities=19% Similarity=0.161 Sum_probs=109.4
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHH
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIR 92 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~ 92 (214)
.+|+||||||+||++ +.|.+||+|+++|++++ +|||||||||+ |+|.++++++..++ ++++++. .+|.|.+.
T Consensus 373 ~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~--d~t~~~~~~~~~~~--~~i~~~~-~~n~G~~~ 444 (625)
T 2z86_A 373 RVPLVSIYIPAYNCS-KYIVRCVESALNQTITD--LEVCICDDGST--DDTLRILQEHYANH--PRVRFIS-QKNKGIGS 444 (625)
T ss_dssp SSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCS--EEEEEEEESCS--SSHHHHHHHHHTTC--TTEEEEE-ECCCCHHH
T ss_pred cCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECcCC--hhHHHHHHHHHhhC--CcEEEEe-CCCCCHHH
Confidence 468999999999999 99999999999999987 79999999999 89999999987764 7899987 67999999
Q ss_pred HHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCC-CEEEEeeeeeecC
Q psy1766 93 ARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERT-NTVTVPIIDIINA 144 (214)
Q Consensus 93 a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~-~~vv~~~~~~~~~ 144 (214)
|+|.|++.|+|+||+|+|+|+.+.|++|+.+++.+.+++ ..++++....++.
T Consensus 445 a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~ 497 (625)
T 2z86_A 445 ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDR 497 (625)
T ss_dssp HHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECT
T ss_pred HHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECC
Confidence 999999999999999999999999999999999996554 3455554444443
No 7
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.90 E-value=7.6e-26 Score=205.04 Aligned_cols=118 Identities=18% Similarity=0.306 Sum_probs=0.0
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHH
Q psy1766 14 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRA 93 (214)
Q Consensus 14 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a 93 (214)
||+||||||+||++ +.|.+||+|+++|++++ +|||||||||+ |+|.++++++..++ ++++++++.++|.|.+.|
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgSt--D~t~~il~~~~~~~-~~~i~~i~~~~n~G~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQD--FNLIIVNDGST--DQSKKLMDEAIKDY-DKNIRFIDLDENSGHAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCC--CcHHHHHHHHHHhC-CCCEEEEECCCCCCHHHH
Confidence 78999999999999 99999999999999987 79999999999 89999999998875 468999998889999999
Q ss_pred HHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEee
Q psy1766 94 RMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 94 ~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
+|.|++.|+|+||+|+|+|+.+.|++|+.+++.+. +.++++++.
T Consensus 75 rN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~ 118 (729)
T 3l7i_A 75 RNIALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPI 118 (729)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEee
Confidence 99999999999999999999999999999999998 556665544
No 8
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.88 E-value=2.1e-23 Score=172.60 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=100.0
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEE-cCCCcchH
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYR-TSKREGLI 91 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~-~~~~~G~~ 91 (214)
.+|+||||||+||++ +.|.+||+|+++|+++.. +|||||||||+ |+|.++++++..+. ...++++. .+.|.|++
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~~-~eiivVDdgS~--D~t~~~~~~~~~~~-~~~~~~~~~~~~n~G~~ 120 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGLV-DELIVLDSGST--DDTEIRAVAAGARV-VSREQALPEVPIRPGKG 120 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTTB-SEEEEEECSCC--SSHHHHHHHTTCEE-EEHHHHCTTSCCCCSHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCCC-cEEEEEeCCCC--chHHHHHHHhhhhh-ccceeeeccCCCCCCHH
Confidence 468999999999999 999999999999997632 79999999999 89999998864331 11222232 57899999
Q ss_pred HHHHhhhhhcCCCEEEEEcCCCc-cCcCchHHHHHHHhcC-CCEEEEeee
Q psy1766 92 RARMFGAKYATGKVLVFLDSHIE-VNTHWLEPLLVPIAER-TNTVTVPII 139 (214)
Q Consensus 92 ~a~n~g~~~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~vv~~~~ 139 (214)
.|+|.|++.|+|+||+|+|+|+. +.|++|+.+++.+.++ ...++++..
T Consensus 121 ~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~ 170 (329)
T 3ckj_A 121 EALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFY 170 (329)
T ss_dssp HHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEe
Confidence 99999999999999999999999 8999999999997554 334454443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.87 E-value=6.9e-22 Score=176.11 Aligned_cols=126 Identities=20% Similarity=0.234 Sum_probs=107.3
Q ss_pred CCCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCC-Ccch
Q psy1766 12 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSK-REGL 90 (214)
Q Consensus 12 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~-~~G~ 90 (214)
..+|+||||||+||+. +.|.+||+|+..|+++. .+|||||||||+ |++.++++++... .+++++..+. +.|.
T Consensus 90 ~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~--d~t~~~~~~~~~~---~~i~~i~~~~~~~g~ 162 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRA-KILAITLACLCNQKTIY-DYEVIVADDGSK--ENIEEIVREFESL---LNIKYVRQKDYGYQL 162 (625)
T ss_dssp CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCS--SCHHHHHHTTTTT---SCEEEEEECCCSCCH
T ss_pred ccCCcEEEEEecCCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCc--hhHHHHHHHhhhc---CCeEEEEeCCCCcch
Confidence 4578999999999999 99999999999997653 289999999999 8999999887543 5788888654 3469
Q ss_pred HHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEeeeeeecC
Q psy1766 91 IRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINA 144 (214)
Q Consensus 91 ~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~~~~~~~ 144 (214)
+.|+|.|++.|+|+||+|+|+|+.+.|+||+.++..+.+++..++++.....+.
T Consensus 163 ~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 216 (625)
T 2z86_A 163 CAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDT 216 (625)
T ss_dssp HHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECC
T ss_pred hHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccC
Confidence 999999999999999999999999999999999999987777666655444433
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.87 E-value=5.4e-22 Score=177.37 Aligned_cols=124 Identities=10% Similarity=-0.000 Sum_probs=99.5
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCC---CCCccEEEEEECCCCCCCC--hHHHHHHHHhhcCCCcEEEEEcCCC
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTG---QSLLHEIILVNDFSEYPSN--LHGEVETFVKGLNNGRVHLYRTSKR 87 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~---~~~~~eiivVdd~s~~~d~--t~~~~~~~~~~~~~~~v~~i~~~~~ 87 (214)
..|+||||||+||+. +.|.+||+||.+|++ .. +|||||||||+ |. +....+..... .+++++++++ |
T Consensus 178 ~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~--~EIIVVDNgSt--D~s~~~~~~e~~~~~--~~~I~vI~~~-N 249 (657)
T 4fix_A 178 GTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVI--GAVIVPDQGER--KVRDHPDFPAAAARL--GSRLSIHDQP-N 249 (657)
T ss_dssp SCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTE--EEEEEEECSSS--CGGGSTTHHHHHHHH--GGGEEEEECC-C
T ss_pred CCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCC--CEEEEEECcCC--CccchHHHHHHHHhc--CCCEEEEECC-C
Confidence 458999999999999 999999999999986 43 69999999998 42 22233222222 3689999977 9
Q ss_pred cchHHHHHhhhhhc----CCCEEEEEcCCCccCcCchHHHHHHHhcCCC-EEEEeeeeeecC
Q psy1766 88 EGLIRARMFGAKYA----TGKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINA 144 (214)
Q Consensus 88 ~G~~~a~n~g~~~a----~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~-~vv~~~~~~~~~ 144 (214)
.|.++|+|.|++.| .+|||+|||+|+.+.|++|+.+++.++.++. .+++|.+...+.
T Consensus 250 ~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~ 311 (657)
T 4fix_A 250 LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQE 311 (657)
T ss_dssp CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTS
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCC
Confidence 99999999999998 4589999999999999999999999976644 455555554443
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.86 E-value=2.5e-22 Score=169.37 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=96.7
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHh---cCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcch
Q psy1766 14 LPSTSVIICFYNEHPATLYRSVQTLLS---RTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGL 90 (214)
Q Consensus 14 ~p~vSVIIp~~n~~~~~l~~~l~sl~~---q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~ 90 (214)
.|+||||||+||++ +.|.+||+|+.+ |...+ +|||||||||+ |+|.++++++..+.....++++..+.|.|+
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~~--~EIIVVDDgSt--D~T~~i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPLI--DQILVVDADSE--DGTAGVAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCCC--SEEEEEECSCS--SSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCCC--eEEEEEcCcCC--ccHHHHHHHhCchhcccceeEecCCccCCH
Confidence 58999999999999 999999999976 34344 79999999999 899999998643310112223345679999
Q ss_pred HHHHHhhhhhcCCCEEEEEcCCCc-cCcCchHHHHHHHhcC-CCEEEEe
Q psy1766 91 IRARMFGAKYATGKVLVFLDSHIE-VNTHWLEPLLVPIAER-TNTVTVP 137 (214)
Q Consensus 91 ~~a~n~g~~~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~vv~~ 137 (214)
+.|+|.|++.|+|+||+|+|+|+. +.|++|+.+++.+.++ ...++++
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G 216 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKA 216 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEE
Confidence 999999999999999999999999 8999999999999765 3344443
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.82 E-value=9.2e-20 Score=166.56 Aligned_cols=128 Identities=16% Similarity=0.204 Sum_probs=104.5
Q ss_pred CCCCCceEEEEEEeCCCchHH-HHHHHHHHhcCCCCCccEEEEEECCCCCCCCh---------------HHHHHHHHhhc
Q psy1766 11 PSTLPSTSVIICFYNEHPATL-YRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL---------------HGEVETFVKGL 74 (214)
Q Consensus 11 ~~~~p~vSVIIp~~n~~~~~l-~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t---------------~~~~~~~~~~~ 74 (214)
++..|+||||||+||++ +.+ .+||+|+.+|++++..+|||||||||+ |++ .+.++++.++.
T Consensus 136 ~~~~P~VSViIPtyNe~-~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgSt--D~T~~~~d~~i~~~~~~~~~~l~~~~~~~ 212 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEP-ADMLSVTLAAAKNMIYPARLRTVVLCDDGGT--DQRCMSPDPELAQKAQERRRELQQLCREL 212 (802)
T ss_dssp TTTCCCEEEEEECTTCC-HHHHHHHHHHHHTSSCCTTCCEEEEESTTCH--HHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEECCCC-HHHHHHHHHHHHhccCCCCcEEEEEEECCCC--ccccccCCHHHHHHHHhhhHHHHHHHHhc
Confidence 35679999999999999 666 899999999999876679999999999 777 33456666654
Q ss_pred CCCcEEEEEcCCC-cchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCC-EEEEeeeeeecC
Q psy1766 75 NNGRVHLYRTSKR-EGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINA 144 (214)
Q Consensus 75 ~~~~v~~i~~~~~-~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~-~vv~~~~~~~~~ 144 (214)
+++++..+++ .|++.|+|.|++.++||||+++|+|+.++|++++++++.+.+++. .++++.....+.
T Consensus 213 ---~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~ 281 (802)
T 4hg6_A 213 ---GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP 281 (802)
T ss_dssp ---TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSC
T ss_pred ---CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCC
Confidence 6777776655 789999999999999999999999999999999999999965544 445544444333
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.73 E-value=2.4e-17 Score=131.06 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=73.9
Q ss_pred CCCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchH
Q psy1766 12 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLI 91 (214)
Q Consensus 12 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~ 91 (214)
+..|++||| |+||+. +.|.+||+|+.+.......+|||||||+|+ |. .|.+
T Consensus 13 ~~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~--d~-------------------------~g~a 63 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDKAEFLAADNREG--NQ-------------------------FHGF 63 (249)
T ss_dssp CCCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTTEEEEEEECTTS--CS-------------------------CCTT
T ss_pred CCcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCcEEEEEEECCCC--Cc-------------------------ccHH
Confidence 345789975 679998 999999998765322111179999999998 41 2668
Q ss_pred HHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhc
Q psy1766 92 RARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAE 129 (214)
Q Consensus 92 ~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~ 129 (214)
.|+|.|++.|+|+||+|||+|+.++++||+.+++.+++
T Consensus 64 ~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 64 SWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp THHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 99999999999999999999999999999999999876
No 14
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.69 E-value=1.3e-16 Score=130.06 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=82.4
Q ss_pred CceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCCh---HHHHHHHHhhcCCCcEEEEEcCCCcchH
Q psy1766 15 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL---HGEVETFVKGLNNGRVHLYRTSKREGLI 91 (214)
Q Consensus 15 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t---~~~~~~~~~~~~~~~v~~i~~~~~~G~~ 91 (214)
+++|||||+||++ .. +|+++++|.+.+ +|||+|||||+ |.+ .+++++++... +.++.+++ ++|.|.+
T Consensus 53 ~klSIVVPvYNEe-~~---lLesVl~qi~~d--~eIIlVdDGS~--D~s~~e~dil~~~~~~~-~~ri~viH-Qkn~gls 122 (391)
T 2wvl_A 53 EQTAIVVPTRNER-LK---LLEGVLSGIPHE--ALILVASNSSP--DRFQMERDLLEEFAHLT-ERPALIFH-QKDPALA 122 (391)
T ss_dssp TTEEEEEEESSCC-HH---HHHHHHHTSCTT--SEEEEEECCCH--HHHHHHHHHHHHHHHHT-TCCEEEEE-TTCHHHH
T ss_pred hceEEEEeccCcH-HH---HHHHHHhcCCCC--ceEEEEECCCC--CChHhHHHHHHHHHhhc-ccceEEEe-ccChHHH
Confidence 6899999999999 54 699999999988 79999999999 888 56888998743 47899998 6799999
Q ss_pred HHHH-h----------------------hhhhc---CCCEEEEEcCCCccCcCchHHH
Q psy1766 92 RARM-F----------------------GAKYA---TGKVLVFLDSHIEVNTHWLEPL 123 (214)
Q Consensus 92 ~a~n-~----------------------g~~~a---~gd~i~~lD~D~~~~~~~l~~l 123 (214)
.|+| . |+..| .|+||.|+|+|+.++.+..+..
T Consensus 123 ~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 123 EALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp HHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred HHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 9996 3 45555 7999999999999966654443
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.66 E-value=5e-16 Score=130.94 Aligned_cols=113 Identities=11% Similarity=0.077 Sum_probs=83.9
Q ss_pred EEEEEEeCCCchHHHHHHHHHHh-cCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcC---CCcEEEEEcC--C--Ccc
Q psy1766 18 SVIICFYNEHPATLYRSVQTLLS-RTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLN---NGRVHLYRTS--K--REG 89 (214)
Q Consensus 18 SVIIp~~n~~~~~l~~~l~sl~~-q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~---~~~v~~i~~~--~--~~G 89 (214)
|+|||.+|++ .+..++.++.. +..+. +|||||||||+ |+|.+++++++.+.+ ..++..+... . |.|
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGSt--D~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~G 75 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYER--DQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPG 75 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSC--CHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSS
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCC--ccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCC
Confidence 4455555554 46677777642 33344 69999999999 999999996654431 2234333322 3 899
Q ss_pred hHHHHHhhh----hhcCCCEEEEEcCCCc-cCcCchHHHHHHHhcCCCEEEE
Q psy1766 90 LIRARMFGA----KYATGKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTV 136 (214)
Q Consensus 90 ~~~a~n~g~----~~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~ 136 (214)
++.|.+.|+ +.++||+|+++|+|.. .+|+++..+++.+.++.+.|+.
T Consensus 76 kG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g 127 (397)
T 2bo4_A 76 KGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRH 127 (397)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEE
Confidence 999999999 8899999999999996 8999999999999777665554
No 16
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.55 E-value=1.2e-14 Score=117.81 Aligned_cols=78 Identities=18% Similarity=0.110 Sum_probs=67.4
Q ss_pred CCCCceEEEEEEeCCCchHHHHHHHHHH---hcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCc
Q psy1766 12 STLPSTSVIICFYNEHPATLYRSVQTLL---SRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKRE 88 (214)
Q Consensus 12 ~~~p~vSVIIp~~n~~~~~l~~~l~sl~---~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~ 88 (214)
...|+||||||+||++ +.|.+||.|+. +|++.+ +|||||||+++ . .+
T Consensus 62 ~~~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d---~------------------------~f 111 (287)
T 2fy7_A 62 VSPHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLD--YGIYVINQAGD---T------------------------IF 111 (287)
T ss_dssp BCSCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEECSS---S------------------------CC
T ss_pred CcCCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCC---C------------------------cc
Confidence 3468999999999999 99999999998 687776 89999999543 1 12
Q ss_pred chHHHHHhhh----hhcCCCEEEEEcCCCccCcCc
Q psy1766 89 GLIRARMFGA----KYATGKVLVFLDSHIEVNTHW 119 (214)
Q Consensus 89 G~~~a~n~g~----~~a~gd~i~~lD~D~~~~~~~ 119 (214)
+.+.++|.|+ +.|+|+||+|+|+|+.+.+++
T Consensus 112 ~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 112 NRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred chhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 5688999999 899999999999999999996
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.51 E-value=1.5e-13 Score=114.69 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=79.4
Q ss_pred CceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCCh------HHHHHHHHhhcCCCcEEEEEcCC--
Q psy1766 15 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL------HGEVETFVKGLNNGRVHLYRTSK-- 86 (214)
Q Consensus 15 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t------~~~~~~~~~~~~~~~v~~i~~~~-- 86 (214)
.++|||||+|||+ ..+ |..++.+.... +|||||||||+ |++ .+.+++++... +..+.+++...
T Consensus 51 ~~iSVVIP~yNEE-~~l---I~~vL~~i~~~--~eIIvVDDgSr--D~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~ 121 (394)
T 2zu9_A 51 GKMAVIVPMKNEK-LHL---VDGVLKAIPHK--CPIIIVSNSKR--EGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPG 121 (394)
T ss_dssp TTEEEEEEESSCC-HHH---HHHHHHHSCTT--SCEEEEECCCC--SSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHH
T ss_pred CCEEEEEecCccc-HHH---HHHHHHcCCCC--cEEEEEECcCc--ccccchhhHHHHHHHHhhcc-ccceEEEecCCcc
Confidence 4799999999999 554 56666665544 79999999998 666 67777776653 24566666433
Q ss_pred --------------------CcchHHHHHhhhhhc---CCCEEEEEcCCCccCcCchHHHHHHHh
Q psy1766 87 --------------------REGLIRARMFGAKYA---TGKVLVFLDSHIEVNTHWLEPLLVPIA 128 (214)
Q Consensus 87 --------------------~~G~~~a~n~g~~~a---~gd~i~~lD~D~~~~~~~l~~l~~~~~ 128 (214)
+.|++.|.-.|+..| +|++|+|+|+|. ..|..+.++++.+.
T Consensus 122 v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 122 LAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred hhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 149999999999999 999999999999 56776766666544
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.39 E-value=2e-12 Score=106.81 Aligned_cols=113 Identities=13% Similarity=0.145 Sum_probs=86.5
Q ss_pred CceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEE---------cC
Q psy1766 15 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYR---------TS 85 (214)
Q Consensus 15 p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~---------~~ 85 (214)
+.++|||++||+. + |.++|+||++|.+....++|||.|||+. +++.++++++.. .|..+. .+
T Consensus 2 ~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~--~~~~~vi~~~~~-----~I~~~~~~d~~~~~~~~ 72 (343)
T 1fo8_A 2 AVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGH--EETAQVIASYGS-----AVTHIRQPDLSNIAVQP 72 (343)
T ss_dssp CCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTC--HHHHHHHHTTGG-----GSEEEECSCCCCCCCCT
T ss_pred CcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCC--HHHHHHHHHcCC-----ceEEEEcCCccccccch
Confidence 5689999999999 8 9999999999986554479999999998 788888887632 233332 24
Q ss_pred CCcchH----------HHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHHH---HhcCCCEEEE
Q psy1766 86 KREGLI----------RARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVP---IAERTNTVTV 136 (214)
Q Consensus 86 ~~~G~~----------~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~---~~~~~~~vv~ 136 (214)
+|.|.. .|+|.+++.+++++++++|+|+.+.|+|++-+.+. ++.++.+.++
T Consensus 73 ~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~I 136 (343)
T 1fo8_A 73 DHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCV 136 (343)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEE
T ss_pred hhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEE
Confidence 565643 56666677778999999999999999998665554 4566665544
No 19
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=97.35 E-value=0.0029 Score=49.27 Aligned_cols=103 Identities=20% Similarity=0.196 Sum_probs=64.2
Q ss_pred CCCceEEEEEEeCCC--chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCC--Cc
Q psy1766 13 TLPSTSVIICFYNEH--PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSK--RE 88 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~--~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~--~~ 88 (214)
++|.|-||.|+|.+. ...|.+.-+.|. +. ++ .-.|||+|+... .+.+.++.++. +-..+.+..+. ++
T Consensus 1 ~~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~V-p~--l~WIVVEd~~~~----~~~v~~lL~~s-gl~y~HL~~~~~~~~ 71 (246)
T 2d0j_A 1 QLPTIYAITPTYSRPVQKAELTRLANTFR-QV-AQ--LHWILVEDAAAR----SELVSRFLARA-GLPSTHLHVPTPRRY 71 (246)
T ss_dssp CCCCEEEEEEECCSTTHHHHHHHHHHHHT-TS-TT--EEEEEEESSSSC----CHHHHHHHHHS-CSCEEEEECCCCCC-
T ss_pred CCCEEEEEeCCCCccchhHHHHHHHHHHh-cC-Cc--eEEEEEcCCCCC----CHHHHHHHHHc-CCceEEEecCCcccc
Confidence 368899999999987 344444444443 33 33 489999998752 22333444443 22333333221 11
Q ss_pred ------chHHHHHhhhhhcC---------CCEEEEEcCCCccCcCchHHHH
Q psy1766 89 ------GLIRARMFGAKYAT---------GKVLVFLDSHIEVNTHWLEPLL 124 (214)
Q Consensus 89 ------G~~~a~n~g~~~a~---------gd~i~~lD~D~~~~~~~l~~l~ 124 (214)
.....||.|++..+ .-+|.|.|+|..++-..++++.
T Consensus 72 ~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 72 KRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred CCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 12478999996642 3688999999999988888754
No 20
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=97.19 E-value=0.0012 Score=51.55 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=64.8
Q ss_pred CCCceEEEEEEeCCC--chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEc--CC--
Q psy1766 13 TLPSTSVIICFYNEH--PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRT--SK-- 86 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~--~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~--~~-- 86 (214)
.+|.|-||.|+|.+. ...|.+.-+.| .+. ++ .-.|||+|+....+.+.+++++- ++.+.+. +.
T Consensus 1 ~~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~V-p~--L~WIVVEd~~~~t~~va~lL~~s-------gl~y~HL~~~~p~ 69 (253)
T 1v84_A 1 ALPTIHVVTPTYSRPVQKAELTRMANTL-LHV-PN--LHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVETPR 69 (253)
T ss_dssp -CCEEEEEEEECCSTTHHHHHHHHHHHH-TTS-SS--EEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCCCH
T ss_pred CCCEEEEEeCCCCccchhHHHHHHhhhh-ccC-Cc--eEEEEEeCCCCCCHHHHHHHHHc-------CCceEEeecCCCc
Confidence 368899999999987 44555555555 333 35 58999999753103444444442 4444433 21
Q ss_pred C------------cchHHHHHhhhhhcC---------CCEEEEEcCCCccCcCchHHHH
Q psy1766 87 R------------EGLIRARMFGAKYAT---------GKVLVFLDSHIEVNTHWLEPLL 124 (214)
Q Consensus 87 ~------------~G~~~a~n~g~~~a~---------gd~i~~lD~D~~~~~~~l~~l~ 124 (214)
+ .-....||.|++..+ .-+|.|.|+|..++-..+++|-
T Consensus 70 ~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 70 NYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp HHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred cccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 1 112468999997653 3578899999999988888754
No 21
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=97.14 E-value=0.0038 Score=49.31 Aligned_cols=104 Identities=17% Similarity=0.099 Sum_probs=61.8
Q ss_pred CCCCCceEEEEEEeCCC--chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCc
Q psy1766 11 PSTLPSTSVIICFYNEH--PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKRE 88 (214)
Q Consensus 11 ~~~~p~vSVIIp~~n~~--~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~ 88 (214)
....|.|-||.|+|.+. ...|.+.-+.| .+.+ + .-.|||+|+....+.+.+++++- +-..+.+..+.+.
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~Vp-~--L~WIVVEd~~~~t~~va~lL~rs-----Gl~y~HL~~~~p~ 87 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTL-SLVP-R--LHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPK 87 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHH-TTSS-S--EEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC-
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHH-hcCC-c--eEEEEEcCCCCCCHHHHHHHHHc-----CCceEEeccCCCc
Confidence 35678999999999987 33444444443 3333 4 58999999753103444444442 1223333222111
Q ss_pred --------------chHHHHHhhhhhcC-----------------CCEEEEEcCCCccCcCchHHH
Q psy1766 89 --------------GLIRARMFGAKYAT-----------------GKVLVFLDSHIEVNTHWLEPL 123 (214)
Q Consensus 89 --------------G~~~a~n~g~~~a~-----------------gd~i~~lD~D~~~~~~~l~~l 123 (214)
-....||.|++..+ .-+|.|.|+|..++-..+++|
T Consensus 88 ~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 88 AQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp ----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 12467999997665 247789999999998888774
No 22
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.00 E-value=0.0033 Score=49.88 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=55.2
Q ss_pred CceEEEEEEeCCCchHHHHHHHH---HHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchH
Q psy1766 15 PSTSVIICFYNEHPATLYRSVQT---LLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLI 91 (214)
Q Consensus 15 p~vSVIIp~~n~~~~~l~~~l~s---l~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~ 91 (214)
-+++||||.+|++ +.|...|.- +++...-. +.|+||+.... ..+..+
T Consensus 51 ~kvAIIIPyRdR~-~hL~~fl~~lhp~L~rQ~l~--y~I~VieQ~~~---------------------------~~FNRa 100 (287)
T 3lw6_A 51 HKMALLVPFRDRF-EELLQFVPHMTAFLKRQGVA--HHIFVLNQVDR---------------------------FRFNRA 100 (287)
T ss_dssp CEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCE--EEEEEEEECSS---------------------------SCCCHH
T ss_pred ceEEEEEEeCCHH-HHHHHHHHHHHHHHHHcCCc--eEEEEEecCCC---------------------------Cccchh
Confidence 3799999999999 777666644 34433223 78999888532 356778
Q ss_pred HHHHhhhhhcC--CCEEEEEcCCCccCcC
Q psy1766 92 RARMFGAKYAT--GKVLVFLDSHIEVNTH 118 (214)
Q Consensus 92 ~a~n~g~~~a~--gd~i~~lD~D~~~~~~ 118 (214)
..+|.|+..|. .|+++|-|.|..+..+
T Consensus 101 ~LlNvGf~ea~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 101 SLINVGFQFASDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp HHHHHHHHHSCTTCCEEEEECTTEEECCT
T ss_pred heecccHHHHhccCCEEEEecccccccCC
Confidence 89999998884 6999999999887654
No 23
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=96.90 E-value=0.0033 Score=50.36 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=78.4
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHH
Q psy1766 14 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRA 93 (214)
Q Consensus 14 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a 93 (214)
..+++|||-+|++. +.|.+.|+.+.....- .||+||=++... .........+... ...|+++....| .. ..
T Consensus 27 ~~~FTvvi~ty~R~-~~L~~lv~~~~~~~~v---~~IvVvWn~~~~-~pp~~~~~~~~~~--~vpv~v~~~~~n-sL-nn 97 (293)
T 1omz_A 27 LDSFTLIMQTYNRT-DLLLRLLNHYQAVPSL---HKVIVVWNNVGE-KGPEELWNSLGPH--PIPVIFKPQTAN-KM-RN 97 (293)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHHTTSTTE---EEEEEEECCTTC-CCTHHHHHHTCCC--SSCEEEEECSSC-CG-GG
T ss_pred CCceEEEEEeeccc-HHHHHHHHHHhcCCCC---CeEEEEeCCCCC-CCChhhccccCCC--CccEEEEeCCCC-ch-hh
Confidence 34799999999997 8888888876433322 599988777642 2233333332111 246888876544 22 23
Q ss_pred HHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEE
Q psy1766 94 RMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTV 136 (214)
Q Consensus 94 ~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~ 136 (214)
|=.-....+++-|+.+|+|..++.+-|+.......+.++-+|+
T Consensus 98 RF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG 140 (293)
T 1omz_A 98 RLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 140 (293)
T ss_dssp GGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred ccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence 3334456689999999999999999999998988888776665
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=96.32 E-value=0.04 Score=42.98 Aligned_cols=88 Identities=13% Similarity=0.174 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhc---CCCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a---~gd~ 105 (214)
..|..+++.+.+.. . .+|+|+-+ + + .+.++..++ +..+.+...+...|.+.+.. +++.. ..+.
T Consensus 28 Pli~~~l~~l~~~~-~---~~ivVv~~-~---~----~i~~~~~~~-g~~v~~~~~~~~~Gt~~~~~-~~~~l~~~~~d~ 93 (252)
T 3oam_A 28 PMIQWVYEQAMQAG-A---DRVIIATD-D---E----RVEQAVQAF-GGVVCMTSPNHQSGTERLAE-VVAKMAIPADHI 93 (252)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEES-C---H----HHHHHHHHT-TCEEEECCTTCCSHHHHHHH-HHHHTTCCTTSE
T ss_pred EHHHHHHHHHHhCC-C---CeEEEECC-H---H----HHHHHHHHc-CCEEEEcCCCCCCcHHHHHH-HHHhcCcCCCCE
Confidence 46667777776543 2 38888764 2 2 333443443 23333333344566666443 44443 5789
Q ss_pred EEEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 106 LVFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 106 i~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
++++++|.. +++..+..+++.+.++
T Consensus 94 vlv~~gD~Pli~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 94 VVNVQGDEPLIPPAIIRQVADNLAAC 119 (252)
T ss_dssp EEECCTTCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEeCCeeecCHHHHHHHHHHHHhc
Confidence 999999995 6889999999988653
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=96.22 E-value=0.028 Score=44.37 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=62.1
Q ss_pred CCceEEEEEEeCCC-------------chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEE
Q psy1766 14 LPSTSVIICFYNEH-------------PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVH 80 (214)
Q Consensus 14 ~p~vSVIIp~~n~~-------------~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~ 80 (214)
.|++.+||++.... ...|..+++.+.+.. . .+|+|+-+ . +.. +++..++ +++
T Consensus 16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~-i---~~IvV~t~--~--~~i----~~~~~~~---g~~ 80 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG-A---ERIIVATD--H--EDV----ARAVEAA---GGE 80 (264)
T ss_dssp --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT-C---SEEEEEES--C--HHH----HHHHHHT---TCE
T ss_pred CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC-C---CEEEEECC--H--HHH----HHHHHHc---CCE
Confidence 34688888887654 134556777766543 2 38888764 2 233 3333333 344
Q ss_pred EEE--cCCCcchHHHHHhhhhhc---CCCEEEEEcCCCc-cCcCchHHHHHHHhcCC
Q psy1766 81 LYR--TSKREGLIRARMFGAKYA---TGKVLVFLDSHIE-VNTHWLEPLLVPIAERT 131 (214)
Q Consensus 81 ~i~--~~~~~G~~~a~n~g~~~a---~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 131 (214)
++. .....|.+. ...+++.. ..++++++++|.. +++..+..+++.+.+..
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~ 136 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ 136 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSS
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 443 334455544 33344433 5799999999995 58899999999986543
No 26
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=95.93 E-value=0.25 Score=37.65 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-----CCcchHHHHHhhhhhc-C
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-----KREGLIRARMFGAKYA-T 102 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-----~~~G~~~a~n~g~~~a-~ 102 (214)
..|..+++.+.+...-. +|+|+-+ . +. +.++..++ ++.++..+ ...+...+...|++.. .
T Consensus 29 pli~~~i~~~~~~~~~~---~ivv~~~--~--~~----i~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~ 94 (229)
T 1qwj_A 29 PLIGWVLRAALDAGVFQ---SVWVSTD--H--DE----IENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNE 94 (229)
T ss_dssp EHHHHHHHHHHHHTCCS---EEEEEES--C--HH----HHHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTT
T ss_pred EHHHHHHHHHHhCCCcC---EEEEECC--h--HH----HHHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCC
Confidence 56677777776554323 7877763 1 22 33333333 45555543 1234445666777776 5
Q ss_pred CCEEEEEcCCCc-cCcCchHHHHHHHhcCCC
Q psy1766 103 GKVLVFLDSHIE-VNTHWLEPLLVPIAERTN 132 (214)
Q Consensus 103 gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~~ 132 (214)
.++++++++|.. +++..+..+++.+.++..
T Consensus 95 ~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 125 (229)
T 1qwj_A 95 VDIVGNIQATSPCLHPTDLQKVAEMIREEGY 125 (229)
T ss_dssp CSEEEEECTTCTTCCHHHHHHHHHHHHSSCC
T ss_pred CCEEEEecCCCCcCCHHHHHHHHHHHHhCCC
Confidence 799999999986 478899999998865543
No 27
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=95.91 E-value=0.027 Score=42.26 Aligned_cols=46 Identities=22% Similarity=0.221 Sum_probs=35.7
Q ss_pred chHHHHHhhhhh----cCCCEEEEEcCC---CccCcCchHHHHHHHhcCCCEEEEe
Q psy1766 89 GLIRARMFGAKY----ATGKVLVFLDSH---IEVNTHWLEPLLVPIAERTNTVTVP 137 (214)
Q Consensus 89 G~~~a~n~g~~~----a~gd~i~~lD~D---~~~~~~~l~~l~~~~~~~~~~vv~~ 137 (214)
-...|||..+.. .+.++++|+|+| ..++|+.+.+++ +.+.++|++.
T Consensus 36 lI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl---~~g~DVV~Gs 88 (203)
T 2c0n_A 36 HVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF---NEGYDVVCGY 88 (203)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH---HHTCSEEEEE
T ss_pred chHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH---hCCCCEEEEE
Confidence 456777777655 467999999999 999999999988 4566766653
No 28
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.87 E-value=0.14 Score=40.06 Aligned_cols=102 Identities=13% Similarity=0.180 Sum_probs=62.4
Q ss_pred CceEEEEEEeCCC-------------chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEE
Q psy1766 15 PSTSVIICFYNEH-------------PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHL 81 (214)
Q Consensus 15 p~vSVIIp~~n~~-------------~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~ 81 (214)
|++.+|||+.... ...|..+++.+.+.. . .+|+|+-+ . + .++++..++ +..+.+
T Consensus 8 M~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~~-i---~~VvVvt~--~--~----~i~~~~~~~-g~~v~~ 74 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKSG-A---EEVVIATD--D--K----RIRQVAEDF-GAVVCM 74 (256)
T ss_dssp -CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHTT-C---SEEEEEES--C--H----HHHHHHHHT-TCEEEE
T ss_pred CCceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhCC-C---CEEEEECC--H--H----HHHHHHHHc-CCeEEE
Confidence 4688888886544 135667777776543 2 38888754 1 2 333333343 223333
Q ss_pred EEcCCCcchHHHHHhhhhhc---CCCEEEEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 82 YRTSKREGLIRARMFGAKYA---TGKVLVFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 82 i~~~~~~G~~~a~n~g~~~a---~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
...+...|.+. ...|++.. ..++++++++|.. +++..+..+++.+.++
T Consensus 75 ~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~ 126 (256)
T 3tqd_A 75 TSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEH 126 (256)
T ss_dssp CCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHC
T ss_pred eCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhC
Confidence 23234456554 44455554 5799999999995 5789999999988654
No 29
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=95.64 E-value=0.15 Score=40.39 Aligned_cols=121 Identities=8% Similarity=0.088 Sum_probs=73.0
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCc--c-
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKRE--G- 89 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~--G- 89 (214)
++|.+-|++.+=+.-...+..++.|++..+... ...+.|+.++-+ ++..+.++++...+ +..++++..+... +
T Consensus 2 ~~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~-~~~~~il~~~is--~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~ 77 (276)
T 3tzt_A 2 NAMADALLLTLDENYIPQMKVLMTSIYINNPGR-IFDVYLIHSRIS--EDKLKDLGEDLKKF-SYTLYPIRATDDLFSFA 77 (276)
T ss_dssp ---CEEEEEECCGGGHHHHHHHHHHHHHHSTTC-CEEEEEEESCCC--HHHHHHHHHHHHTT-TCEEEEEECC-------
T ss_pred CceeEEEEEEeCHhHHHHHHHHHHHHHHhCCCC-ceEEEEEeCCCC--HHHHHHHHHHHHHc-CCEEEEEEeCHHHHhcC
Confidence 457788887664333688899999998877632 267878888766 67778888887765 4566666543211 0
Q ss_pred --------hHHHHHhhhhhc--CCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEee
Q psy1766 90 --------LIRARMFGAKYA--TGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 90 --------~~~a~n~g~~~a--~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
....|-..-... .-+-++++|+|..+..+ +.++.+.=..+...++++.
T Consensus 78 ~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d-i~~L~~~dl~~~~~aav~d 135 (276)
T 3tzt_A 78 KVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP-LDDLLRTDISDYILAAASH 135 (276)
T ss_dssp ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC-SHHHHTCCCTTSSEEEEEC
T ss_pred ccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC-HHHHhhcCCCCCeEEEEEe
Confidence 112222223333 35899999999988765 5555543112344555543
No 30
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=95.57 E-value=0.07 Score=40.64 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-----CCcchHHHHHhhhhhc--
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-----KREGLIRARMFGAKYA-- 101 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-----~~~G~~~a~n~g~~~a-- 101 (214)
..|..+++.+.+..... +|+|+-+. +. +.++..++ ++.++..+ ...|...+...|++..
T Consensus 30 pll~~~l~~~~~~~~~~---~ivvv~~~----~~----i~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~ 95 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFD---RIIVSTDG----GL----IAEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGS 95 (228)
T ss_dssp EHHHHHHHHHHHHCCCS---EEEEEESC----HH----HHHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCCCC---EEEEECCC----HH----HHHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCC
Confidence 46677787776554333 88887742 22 23333333 34444432 2345666777777776
Q ss_pred CCCEEEEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 102 TGKVLVFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 102 ~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
..++++++++|.. +++..+..+++.+.+.
T Consensus 96 ~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~ 125 (228)
T 1ezi_A 96 NSGTVTLLQPTSPLRTGAHIREAFSLFDEK 125 (228)
T ss_dssp CSEEEEECCTTCTTCCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc
Confidence 3589999999986 5788899998877544
No 31
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=95.33 E-value=0.54 Score=35.91 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC--CCcchHHHHHhhhhhcCCCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS--KREGLIRARMFGAKYATGKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~--~~~G~~~a~n~g~~~a~gd~i 106 (214)
..|..+++.+.+..... +|+||-+. + .+.++..++ ++.++..+ ...|.+.+. .|++....+.+
T Consensus 28 pli~~~i~~~~~~~~~~---~ivvv~~~----~----~i~~~~~~~---~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~ 92 (245)
T 1h7e_A 28 PMIQHVYERALQVAGVA---EVWVATDD----P----RVEQAVQAF---GGKAIMTRNDHESGTDRLV-EVMHKVEADIY 92 (245)
T ss_dssp EHHHHHHHHHHTCTTCC---EEEEEESC----H----HHHHHHHHT---TCEEEECCSCCSSHHHHHH-HHHHHSCCSEE
T ss_pred hHHHHHHHHHHhCCCCC---eEEEECCc----H----HHHHHHHHc---CCeEEeCCCccCCcHHHHH-HHHHhCCCCEE
Confidence 57777888876554323 88887642 1 334444433 56666642 334555554 45555567999
Q ss_pred EEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 107 VFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 107 ~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
+++++|.. +++..+..+++.+.++
T Consensus 93 lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 93 INLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp EECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred EEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 99999996 5788999999887554
No 32
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=95.05 E-value=0.038 Score=40.92 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-CCcchHHHHHhhhhhc--CCCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-KREGLIRARMFGAKYA--TGKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~G~~~a~n~g~~~a--~gd~ 105 (214)
..+..+++.+.+.. . .+|+||-+... +.+.++... .+++++..+ ...|...+...|++.. ..++
T Consensus 32 pll~~~l~~l~~~~-~---~~i~vv~~~~~------~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~ 98 (197)
T 2wee_A 32 TVLGATLDVARQAG-F---DQLILTLGGAA------SAVRAAMAL---DGTDVVVVEDVERGCAASLRVALARVHPRATG 98 (197)
T ss_dssp EHHHHHHHHHHHTT-C---SEEEEEECTTH------HHHHHHSCC---TTSEEEECC----CCHHHHHHHHTTSCTTEEE
T ss_pred cHHHHHHHHHHhcC-C---CcEEEEeCCCH------HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHHhcccCCe
Confidence 56677777776543 2 37777754321 233443332 256666543 3457888888898887 4689
Q ss_pred EEEEcCCCc-cCcCchHHHHHHHhcCCCEEEEee
Q psy1766 106 LVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 106 i~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
++++++|.. +++..+..+++. ..+.. +++|.
T Consensus 99 vlv~~~D~P~~~~~~i~~l~~~-~~~~~-i~~~~ 130 (197)
T 2wee_A 99 IVLMLGDQPQVAPATLRRIIDV-GPATE-IMVCR 130 (197)
T ss_dssp EEEEETTCTTCCHHHHHHHHHH-GGGSS-EEEEE
T ss_pred EEEEeCCcCCCCHHHHHHHHhh-cCCCC-EEEEe
Confidence 999999995 588999999887 44333 44554
No 33
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=94.96 E-value=0.2 Score=42.97 Aligned_cols=103 Identities=11% Similarity=0.117 Sum_probs=68.5
Q ss_pred EEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhh
Q psy1766 20 IICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAK 99 (214)
Q Consensus 20 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~ 99 (214)
++|..|. ..|...|+.+.+... .+|+||-..-. +...+.+.++...+ +..++++..++..|.+.|...++.
T Consensus 34 l~pv~gk--p~i~~~l~~~~~~g~----~~i~vv~~~~~--~~i~~~~~~~~~~~-~~~i~~~~q~~~lGTa~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGR--SMLSHVLHAIAKLAP----QRLIVVLGHDH--QRIAPLVGELADTL-GRTIDVALQDRPLGTGHAVLCGLS 104 (501)
T ss_dssp GCEETTE--EHHHHHHHHHHHHCC----SEEEEEECTTH--HHHHHHHHHHHHHH-TSCCEEEECSSCCCHHHHHHHHHT
T ss_pred HeEECCh--hHHHHHHHHHHhCCC----CEEEEEeCCCH--HHHHHHHHHHHHhc-CCcEEEEEcCCCCCcHHHHHHHHH
Confidence 4455554 356667777665543 37877765443 44555555544444 568899988889999999999988
Q ss_pred hcCC---CEEEEEcCCC-ccCcCchHHHHHHHhcCC
Q psy1766 100 YATG---KVLVFLDSHI-EVNTHWLEPLLVPIAERT 131 (214)
Q Consensus 100 ~a~g---d~i~~lD~D~-~~~~~~l~~l~~~~~~~~ 131 (214)
.... +.++++.+|+ .+..+.+..+++......
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~ 140 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVS 140 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTT
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhhcc
Confidence 7643 3566666665 457788999888775443
No 34
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=94.91 E-value=0.33 Score=36.80 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEc--CCCcchHHHHHhhhhhcCCCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRT--SKREGLIRARMFGAKYATGKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~--~~~~G~~~a~n~g~~~a~gd~i 106 (214)
..|..+++.+.+. .. +|+|+-+. +.+.++..++ +.++.. ....|.+.+. .|++....+++
T Consensus 28 pli~~~l~~~~~~--~~---~i~v~~~~--------~~i~~~~~~~----~~~~~~~~~~~~g~~~~~-~~~~~~~~~~v 89 (234)
T 2y6p_A 28 PLIRWVVEGLVKT--GE---RVILATDS--------ERVKEVVEDL----CEVFLTPSDLPSGSDRVL-YVVRDLDVDLI 89 (234)
T ss_dssp EHHHHHHHHHHTT--TS---CEEEEESC--------HHHHHHHTTT----SEEEECCTTCCSHHHHHH-HHHTTCCCSEE
T ss_pred EHHHHHHHHHHHh--CC---EEEEECCh--------HHHHHHHHhc----eEEEECCcccccchHHHH-HHHHhCCCCEE
Confidence 5677788887655 22 77777532 1334443332 344433 2245666666 46676678999
Q ss_pred EEEcCCC-ccCcCchHHHHHHHhcCCC
Q psy1766 107 VFLDSHI-EVNTHWLEPLLVPIAERTN 132 (214)
Q Consensus 107 ~~lD~D~-~~~~~~l~~l~~~~~~~~~ 132 (214)
+++++|. .+++..+..+++.+.+..+
T Consensus 90 lv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 90 INYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp EECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred EEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 9999999 6677899999988765444
No 35
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=94.80 E-value=0.23 Score=37.90 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC-CCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT-GKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~-gd~i~ 107 (214)
..|..+++.+.+.... .+|+||-+... +...+ +. .+....++++.. ..|...+...|++... .++++
T Consensus 36 pll~~~i~~l~~~~~~---~~ivvv~~~~~--~~~~~-~~----~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~l 103 (236)
T 1i52_A 36 TILEHSVHALLAHPRV---KRVVIAISPGD--SRFAQ-LP----LANHPQITVVDG--GDERADSVLAGLKAAGDAQWVL 103 (236)
T ss_dssp EHHHHHHHHHHTSTTE---EEEEEEECTTC--CSGGG-SG----GGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEE
T ss_pred EHHHHHHHHHHhCCCC---CeEEEEeCccH--HHHHH-HH----hcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEE
Confidence 4555666666543322 37777766443 33333 22 221135666552 3577778888888874 79999
Q ss_pred EEcCCCc-cCcCchHHHHHHHhcCC-C-EEEEee
Q psy1766 108 FLDSHIE-VNTHWLEPLLVPIAERT-N-TVTVPI 138 (214)
Q Consensus 108 ~lD~D~~-~~~~~l~~l~~~~~~~~-~-~vv~~~ 138 (214)
++++|.. ++++.+..+++.+.+.. . ++++|.
T Consensus 104 v~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 137 (236)
T 1i52_A 104 VHDAARPCLHQDDLARLLALSETSRTGGILAAPV 137 (236)
T ss_dssp ECCTTCTTCCHHHHHHHHGGGGTCSSCEEEEEEC
T ss_pred EEcCccccCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 9999986 58889999998876553 2 334554
No 36
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=94.55 E-value=0.06 Score=39.85 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-CCcchHHHHHhhhhhc--CCCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-KREGLIRARMFGAKYA--TGKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~G~~~a~n~g~~~a--~gd~ 105 (214)
..+..+++.+.... . .+|+||-+... +.+.++... .++.++..+ ...|...+...|++.. ..++
T Consensus 32 pli~~~l~~l~~~~-~---~~i~vv~~~~~------~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~ 98 (199)
T 2waw_A 32 TLLGATLAMARRCP-F---DQLIVTLGGAA------DEVLEKVEL---DGLDIVLVDDAGLGCSSSLKSALTWVDPTAEG 98 (199)
T ss_dssp EHHHHHHHHHHTSS-C---SEEEEEECTTH------HHHHHHSCC---TTSEEEECCCCCTTCCCHHHHHHHTSCTTCSE
T ss_pred CHHHHHHHHHHhCC-C---CcEEEEeCCCH------HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHhhhccCCe
Confidence 56667777776543 2 37877765321 233443332 245565533 3457777888888877 5699
Q ss_pred EEEEcCCCcc-CcCchHHHHHHHhcCCCEEEEee
Q psy1766 106 LVFLDSHIEV-NTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 106 i~~lD~D~~~-~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
++++++|..+ ++..+..+++. ..+. .+++|.
T Consensus 99 vlv~~~D~P~~~~~~i~~l~~~-~~~~-~~~~~~ 130 (199)
T 2waw_A 99 IVLMLGDQPGITASAVASLIAG-GRGA-TIAVCE 130 (199)
T ss_dssp EEEEETTCTTCCHHHHHHHHHH-HTTC-SEEEEE
T ss_pred EEEEeCCcccCCHHHHHHHHhh-cCCC-CEEEEe
Confidence 9999999974 78889999887 4443 344444
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=94.49 E-value=0.28 Score=37.14 Aligned_cols=92 Identities=16% Similarity=0.082 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC--CCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT--GKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~--gd~i 106 (214)
..|..+++.+.+.... .+|+||-+.. ..++.+.+...+ ...+.++. ...|...+...|++... .+++
T Consensus 33 pli~~~l~~l~~~~~~---~~ivvv~~~~-----~~~~~~~~~~~~-~~~v~~~~--~~~~~~~sv~~al~~~~~~~~~v 101 (228)
T 2yc3_A 33 PIALYSFFTFSRMPEV---KEIVVVCDPF-----FRDIFEEYEESI-DVDLSFAI--PGKERQDSVYSGLQEIDVNSELV 101 (228)
T ss_dssp EHHHHHHHHHHHCTTE---EEEEEECCGG-----GHHHHHTTTTTS-SSEEEEEC--CCSSHHHHHHHHHTTSCTTCSEE
T ss_pred EHHHHHHHHHHcCCCC---CeEEEEEChH-----HHHHHHHHHHhC-CCcEEEEC--CCCCHHHHHHHHHHhhccCCCEE
Confidence 4555677776544222 3777774432 122333333222 22455554 23577788888887764 4899
Q ss_pred EEEcCCC-ccCcCchHHHHHHHhcCC
Q psy1766 107 VFLDSHI-EVNTHWLEPLLVPIAERT 131 (214)
Q Consensus 107 ~~lD~D~-~~~~~~l~~l~~~~~~~~ 131 (214)
+++|+|. .+++..+..+++.+.+..
T Consensus 102 l~~d~d~P~~~~~~i~~l~~~~~~~~ 127 (228)
T 2yc3_A 102 CIHDSARPLVNTEDVEKVLKDGSAVG 127 (228)
T ss_dssp EEEETTCTTCCHHHHHHHHHHHHHHS
T ss_pred EEecCCCccCCHHHHHHHHHHHHhcC
Confidence 9999997 568889999998875433
No 38
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=94.39 E-value=0.86 Score=35.54 Aligned_cols=91 Identities=11% Similarity=0.181 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHh---hcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVK---GLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~---~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~ 105 (214)
..|..+|+++.+.. . .+|+||-+... ..++ .++.. .+ +..+.++..+...|.+.+...|++....+.
T Consensus 56 pli~~~l~~l~~~g-~---~~iivv~~~~~----~~~~-~~~~~~~~~~-~~~i~~~~~~~~~G~~~al~~a~~~~~~~~ 125 (269)
T 4ecm_A 56 PMIYHAVYKLKQCD-I---TDIMIITGKEH----MGDV-VSFLGSGQEF-GVSFTYRVQDKAGGIAQALGLCEDFVGNDR 125 (269)
T ss_dssp EHHHHHHHHHHHTT-C---CEEEEEECTTT----HHHH-HHHHTTSGGG-TCEEEEEECSSCCCHHHHHHTTHHHHTTSE
T ss_pred EHHHHHHHHHHHCC-C---CEEEEECChhh----HHHH-HHHHhhcccc-CceEEEeeCCccCcHHHHHHHHHHhcCCCc
Confidence 45667777776653 2 37877765422 2223 33332 12 235666666667899999999988877789
Q ss_pred EEEEcCCCccCcCchHHHHHHHhcC
Q psy1766 106 LVFLDSHIEVNTHWLEPLLVPIAER 130 (214)
Q Consensus 106 i~~lD~D~~~~~~~l~~l~~~~~~~ 130 (214)
++++.+|..+. ..+..+++.+.+.
T Consensus 126 ~lv~~~D~~~~-~~l~~l~~~~~~~ 149 (269)
T 4ecm_A 126 MVVILGDNIFS-DDIRPYVEEFTNQ 149 (269)
T ss_dssp EEEEETTEEES-SCSHHHHHHHHTS
T ss_pred EEEEeCCccCc-cCHHHHHHHHHhc
Confidence 99999999776 6678888877543
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=94.19 E-value=0.52 Score=35.59 Aligned_cols=91 Identities=9% Similarity=-0.028 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhc-------
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA------- 101 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a------- 101 (214)
..|..+++.+.+..... +|+||-+... +...+ +.++ ....+.++ ....|.+.+.-.|++..
T Consensus 35 pli~~~l~~l~~~~~~~---~ivvv~~~~~--~~~~~-~~~~----~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~ 102 (231)
T 1vgw_A 35 TVLEHVLGIFERHEAVD---LTVVVVSPED--TFADK-VQTA----FPQVRVWK--NGGQTRAETVRNGVAKLLETGLAA 102 (231)
T ss_dssp EHHHHHHHHHHTCTTCC---EEEEECCTTC--STHHH-HHHH----CTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSC
T ss_pred EHHHHHHHHHHcCCCCC---eEEEEECccH--HHHHH-HHhc----CCCceEEE--cCCCcHHHHHHHHHHHHhhhccCC
Confidence 56777787776543233 7877765433 33333 3322 11356554 34567778888887765
Q ss_pred CCCEEEEEcCCCc-cCcCchHHHHHHHhcCC
Q psy1766 102 TGKVLVFLDSHIE-VNTHWLEPLLVPIAERT 131 (214)
Q Consensus 102 ~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 131 (214)
..+.++++++|.. ++++.+..+++.+.++.
T Consensus 103 ~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 103 ETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp TTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred CCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 4689999999985 57888999998876543
No 40
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=94.16 E-value=0.63 Score=36.23 Aligned_cols=88 Identities=10% Similarity=0.115 Sum_probs=53.9
Q ss_pred hHHHHHH-HHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhc---CCC
Q psy1766 29 ATLYRSV-QTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGK 104 (214)
Q Consensus 29 ~~l~~~l-~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a---~gd 104 (214)
..|..++ +.+.+.. . .+|+|+-+. + .+.++..++ +..+.+.......|.. +...|++.. ..+
T Consensus 27 Pli~~~i~~~~~~~~-~---~~vvVvt~~----~----~i~~~~~~~-g~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d 92 (253)
T 4fcu_A 27 PMILRVVDQAKKVEG-F---DDLCVATDD----E----RIAEICRAE-GVDVVLTSADHPSGTD-RLSEVARIKGWDADD 92 (253)
T ss_dssp EHHHHHHHHHHTCTT-C---CEEEEEESC----H----HHHHHHHTT-TCCEEECCTTCCCHHH-HHHHHHHHHTCCTTC
T ss_pred EhHHHHHHHHHHhcC-C---CEEEEECCH----H----HHHHHHHHc-CCeEEEeCCCCCChHH-HHHHHHHhcCcCCCC
Confidence 5677788 7765432 2 388888642 2 334444443 2233332223334543 444555554 458
Q ss_pred EEEEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 105 VLVFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 105 ~i~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
+++++++|.. ++++.+..+++.+.++
T Consensus 93 ~vlv~~gD~Pli~~~~i~~li~~~~~~ 119 (253)
T 4fcu_A 93 IIVNVQGDEPLLPAQLVQQVAKLLVDK 119 (253)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Confidence 9999999995 5889999999998654
No 41
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=93.74 E-value=0.17 Score=42.65 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC-CCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT-GKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~-gd~i~ 107 (214)
..|..+|+.+.+.. . .+|+|+-.... +.++++... .+++++..+...|.+.+...|++... .++++
T Consensus 37 pli~~~l~~l~~~~-~---~~i~vv~~~~~------~~i~~~~~~---~~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~l 103 (459)
T 4fce_A 37 PMVQHVIDAAMKLG-A---QHVHLVYGHGG------ELLKKTLAD---PSLNWVLQAEQLGTGHAMQQAAPHFADDEDIL 103 (459)
T ss_dssp EHHHHHHHHHHHHT-C---SCEEEEESSCH------HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEE
T ss_pred eHHHHHHHHHHhCC-C---CcEEEEeCCCH------HHHHHHhcc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCcEE
Confidence 46677777776654 2 27777765322 233443332 35667766777888999999998886 48999
Q ss_pred EEcCCCc-cCcCchHHHHHHHhc
Q psy1766 108 FLDSHIE-VNTHWLEPLLVPIAE 129 (214)
Q Consensus 108 ~lD~D~~-~~~~~l~~l~~~~~~ 129 (214)
++++|.. +.+..+..+++.+.+
T Consensus 104 v~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 104 MLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp EEETTCTTCCHHHHHHHHHHCCT
T ss_pred EEeCCcccCCHHHHHHHHHHHhh
Confidence 9999984 688889999988755
No 42
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=93.69 E-value=0.21 Score=37.75 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=62.1
Q ss_pred CCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEc-CCCcchHHHHHhhhhhcCC
Q psy1766 25 NEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRT-SKREGLIRARMFGAKYATG 103 (214)
Q Consensus 25 n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~-~~~~G~~~a~n~g~~~a~g 103 (214)
+.. ..+..+++.+... +|+||-+. . +.++.+...+ ++.++.. ....|...+...|++.+ .
T Consensus 24 ~G~-pli~~~~~~l~~~-------~vvvv~~~-~------~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~ 84 (208)
T 3ngw_A 24 CGK-KLIEWVLEKYSPF-------QTVFVCRD-E------KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-G 84 (208)
T ss_dssp TTE-EHHHHHHHHHTTS-------EEEEECSS-H------HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-S
T ss_pred CCe-eHHHHHHHHhcCC-------CEEEEECC-H------HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-C
Confidence 455 6777888877533 67777532 1 2344444433 4555543 23457888999999988 8
Q ss_pred CEEEEEcCCCc-cCcCchHHHHHHHhcCCCEEEEee
Q psy1766 104 KVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 104 d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
+++ ++.+|.. ++++.+..+++.+.+....+++|.
T Consensus 85 ~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 85 SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 999 9999986 588999999998865233344444
No 43
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=93.22 E-value=0.15 Score=40.23 Aligned_cols=53 Identities=13% Similarity=0.086 Sum_probs=42.9
Q ss_pred CcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccCcC----chHHHHHHHhc
Q psy1766 77 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTH----WLEPLLVPIAE 129 (214)
Q Consensus 77 ~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~----~l~~l~~~~~~ 129 (214)
..+.++..+...|.+.+...|+.....+.++++.+|..+.++ .+..+++...+
T Consensus 95 ~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 95 CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHH
T ss_pred ccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHH
Confidence 456677767778999999999888777888999999987777 79999988754
No 44
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=93.21 E-value=1.3 Score=33.93 Aligned_cols=99 Identities=9% Similarity=0.126 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC----CC
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT----GK 104 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~----gd 104 (214)
..|..+++.+.+....+ +|+||-+... .+.++++... .+.++... .+...+.-.|++... .+
T Consensus 36 pll~~~l~~~~~~~~~~---~ivVv~~~~~-----~~~~~~~~~~----~v~~v~gg--~~r~~sv~~gl~~~~~~~~~d 101 (231)
T 3q80_A 36 TLIERAVDGLLDSGVVD---TVVVAVPADR-----TDEARQILGH----RAMIVAGG--SNRTDTVNLALTVLSGTAEPE 101 (231)
T ss_dssp EHHHHHHHHHHHTSCCC---EEEEEECGGG-----HHHHHHHHGG----GCEEEECC--SSHHHHHHHHHGGGC---CCS
T ss_pred EHHHHHHHHHHhCCCCC---eEEEECChHH-----HHHHHHHhcC----CeEEEcCC--CchHHHHHHHHHHhhhcCCCC
Confidence 67788888876543333 8888765332 2334444332 45666522 234566667777764 48
Q ss_pred EEEEEcCCCc-cCcCchHHHHHHHhcCCC--EEEEeeeee
Q psy1766 105 VLVFLDSHIE-VNTHWLEPLLVPIAERTN--TVTVPIIDI 141 (214)
Q Consensus 105 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~~--~vv~~~~~~ 141 (214)
+++++|+|.. ++++.+..+++.+.++.+ +.++|..+.
T Consensus 102 ~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~~~p~~dt 141 (231)
T 3q80_A 102 FVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDT 141 (231)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEEEECCSSC
T ss_pred EEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEEEEeccCC
Confidence 9999999987 488999999998876322 334454443
No 45
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=93.16 E-value=0.86 Score=37.67 Aligned_cols=86 Identities=8% Similarity=0.075 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 108 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~ 108 (214)
..+..+++.+.+..... +|+||-+ .. +.++++. ..+.++. ...|...+...|++....+++++
T Consensus 32 PLi~~~l~~l~~~~~~~---~IvVvt~-~~------~~i~~~~-----~~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv 94 (371)
T 1w55_A 32 PLWLYATKNLSSFYPFK---KIVVTSS-NI------TYMKKFT-----KNYEFIE--GGDTRAESLKKALELIDSEFVMV 94 (371)
T ss_dssp EHHHHHHHHHHTTSCCS---CEEEEES-CH------HHHHTTC-----SSSEEEE--CCSSHHHHHHHHHTTCCSSEEEE
T ss_pred EHHHHHHHHHHccCCCC---eEEEEcC-CH------HHHHHHh-----CCCEEEe--CCCChHHHHHHHHHhcCCCeEEE
Confidence 56777777776533333 7888766 22 1222221 1255553 24567778888888877899999
Q ss_pred EcCCCc-cCcCchHHHHHHHhcCC
Q psy1766 109 LDSHIE-VNTHWLEPLLVPIAERT 131 (214)
Q Consensus 109 lD~D~~-~~~~~l~~l~~~~~~~~ 131 (214)
+++|.. ++++.+..+++.+.+..
T Consensus 95 ~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 95 SDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp EETTCTTCCHHHHHHHHTTGGGCS
T ss_pred EeCCcccCCHHHHHHHHHHHHhcC
Confidence 999985 58889999998876553
No 46
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=93.09 E-value=0.32 Score=37.51 Aligned_cols=103 Identities=12% Similarity=0.216 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC------
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT------ 102 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~------ 102 (214)
..|..+|+.+.+..... +|+||-+.... +...+.++.+.. +..+.++.. ..+...+...|++...
T Consensus 33 pll~~~l~~~~~~~~~~---~ivvv~~~~~~-~~~~~~~~~~~~---~~~~~~~~~--~~~~~~sv~~al~~l~~~~~~~ 103 (246)
T 3f1c_A 33 PIIVHTVEKFILNTRFD---KILISSPKEWM-NHAEDNIKKYIS---DDRIVVIEG--GEDRNETIMNGIRFVEKTYGLT 103 (246)
T ss_dssp EHHHHHHHHHHTCTTCS---EEEEEECGGGH-HHHHHHHHHHCC---CTTEEEEEC--CSSHHHHHHHHHHHHHHHTCCC
T ss_pred eHHHHHHHHHHcCCCCC---EEEEEeCHHHH-HHHHHHHHHhCC---CCCEEEECC--CCchHHHHHHHHHHHhhhhcCC
Confidence 67778888876554333 78777654320 112233333211 235666653 2355566666776542
Q ss_pred -CCEEEEEcCCCc-cCcCchHHHHHHHhcCC-CEEEEeeee
Q psy1766 103 -GKVLVFLDSHIE-VNTHWLEPLLVPIAERT-NTVTVPIID 140 (214)
Q Consensus 103 -gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~-~~vv~~~~~ 140 (214)
.++++++|+|.. +++..+..+++.+.+.. .+.+.|..+
T Consensus 104 ~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~~~~d 144 (246)
T 3f1c_A 104 DDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVIEALD 144 (246)
T ss_dssp TTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEEECSS
T ss_pred CCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 589999999985 68899999999886643 334445433
No 47
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=92.87 E-value=1.1 Score=35.46 Aligned_cols=96 Identities=14% Similarity=0.231 Sum_probs=59.3
Q ss_pred EEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhh---cCCCcEEEEEcCCCcchHHHHHhh
Q psy1766 21 ICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG---LNNGRVHLYRTSKREGLIRARMFG 97 (214)
Q Consensus 21 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~---~~~~~v~~i~~~~~~G~~~a~n~g 97 (214)
+|.++. ..+...|+.+.... - .+|+||-.+.. .+.++++... + +..+.++..+...|.+.+...|
T Consensus 28 lpi~gk--pli~~~l~~l~~~g-i---~~I~vv~~~~~-----~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a 95 (293)
T 1fxo_A 28 LPVYDK--PMIYYPLSTLMLAG-I---REILIISTPQD-----TPRFQQLLGDGSNW-GLDLQYAVQPSPDGLAQAFLIG 95 (293)
T ss_dssp SEETTE--ETTHHHHHHHHHTT-C---CEEEEEECTTT-----HHHHHHHHTTSGGG-TCEEEEEECSSCCCGGGHHHHT
T ss_pred CeECCE--eHHHHHHHHHHHCC-C---CEEEEEecccc-----HHHHHHHHhccccc-CceEEEeeCCCCCCHHHHHHHH
Confidence 455554 46666777765543 2 38887764332 2234444432 2 2356667666677888888888
Q ss_pred hhhcCCCEEEEEcCCCccCcCchHHHHHHHh
Q psy1766 98 AKYATGKVLVFLDSHIEVNTHWLEPLLVPIA 128 (214)
Q Consensus 98 ~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~ 128 (214)
++....+-++++.+|..+...-+..+++.+.
T Consensus 96 ~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 96 ESFIGNDLSALVLGDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp HHHHTTSEEEEEETTEEEECTTHHHHHHHHH
T ss_pred HHHhCCCCEEEEECChhccCccHHHHHHHHH
Confidence 8776555555555998765467888888774
No 48
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=92.85 E-value=2 Score=33.11 Aligned_cols=85 Identities=15% Similarity=0.185 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC--CCcchHHHHHhhhhh---cCC
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS--KREGLIRARMFGAKY---ATG 103 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~--~~~G~~~a~n~g~~~---a~g 103 (214)
..|..+++.+.+... . +|+|+-+. +. +.++..++ ++.++..+ ...|.+. ...+++. ...
T Consensus 28 pli~~~l~~l~~~~~-~---~ivvv~~~----~~----i~~~~~~~---~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 91 (262)
T 1vic_A 28 PMIQHVFEKALQSGA-S---RVIIATDN----EN----VADVAKSF---GAEVCMTSVNHNSGTER-LAEVVEKLAIPDN 91 (262)
T ss_dssp EHHHHHHHHHHHTTC-S---EEEEEESC----HH----HHHHHHHT---TCEEEECCCSSCCHHHH-HHHHHHHTTCCTT
T ss_pred EHHHHHHHHHHhCCC-c---eEEEECCc----HH----HHHHHHhc---CCEEEECCccccCChHH-HHHHHHHhccCCC
Confidence 577778888766543 3 88887642 22 33333333 45555542 2334432 2223322 356
Q ss_pred CEEEEEcCCCc-cCcCchHHHHHHHhc
Q psy1766 104 KVLVFLDSHIE-VNTHWLEPLLVPIAE 129 (214)
Q Consensus 104 d~i~~lD~D~~-~~~~~l~~l~~~~~~ 129 (214)
++++++++|.. +++..+..+++.+.+
T Consensus 92 ~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 92 EIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp CEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 89999999985 578889999988754
No 49
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=92.79 E-value=2.5 Score=33.59 Aligned_cols=87 Identities=14% Similarity=0.026 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhh-cCC-CcEEEEEcCCCcchHHHHHhhhhhcC-CCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG-LNN-GRVHLYRTSKREGLIRARMFGAKYAT-GKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~-~~~-~~v~~i~~~~~~G~~~a~n~g~~~a~-gd~ 105 (214)
..|..+|+.+.+. . .+|+||-+.. ..+.+.+.... + + +.+.++..+...|.+.+...++.... .++
T Consensus 38 pli~~~l~~l~~~--~---~~i~vv~~~~-----~~~~i~~~~~~~~-~~~~~~~i~~~~~~gt~~al~~a~~~l~~~~~ 106 (308)
T 2qh5_A 38 SLFELSFKRNASL--V---DETLIVCNEK-----HYFLALEEIKNEI-KNKSVGFLLESLSKNTANAIALSALMSDKEDL 106 (308)
T ss_dssp CHHHHHHHHHHTT--C---SEEEEEEEGG-----GHHHHHHHTTTTC-SSCEEEEEEESSCCCHHHHHHHHHHTSCTTSE
T ss_pred CHHHHHHHHHHcc--C---CCEEEEEChh-----HHHHHHHHHHHhh-CCCccEEEeCCCCCChHHHHHHHHHHhCCCCe
Confidence 5777788887665 2 2777765432 12234444333 3 2 25566666667888888888887765 457
Q ss_pred EEEEcCCCcc-CcCchHHHHHH
Q psy1766 106 LVFLDSHIEV-NTHWLEPLLVP 126 (214)
Q Consensus 106 i~~lD~D~~~-~~~~l~~l~~~ 126 (214)
++++.+|..+ +++.+..+++.
T Consensus 107 ~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 107 LIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp EEEEESSCBCCCHHHHHHHHHH
T ss_pred EEEEcCCccccCHHHHHHHHHH
Confidence 9999999987 67778888875
No 50
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=92.77 E-value=0.81 Score=34.05 Aligned_cols=89 Identities=8% Similarity=0.113 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-CC-cchHHHHHhhhhhcCCCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-KR-EGLIRARMFGAKYATGKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-~~-~G~~~a~n~g~~~a~gd~i 106 (214)
..+..+++.+... . .+|+||-+.. .. .+. + .++.++... .. .|...+...|++....+++
T Consensus 34 pli~~~l~~l~~~--~---~~ivvv~~~~-----~~----~~~-~---~~~~~v~~~~~~~~G~~~si~~~l~~~~~~~v 95 (201)
T 1e5k_A 34 PLWQHVADALMTQ--L---SHVVVNANRH-----QE----IYQ-A---SGLKVIEDSLADYPGPLAGMLSVMQQEAGEWF 95 (201)
T ss_dssp EHHHHHHHHHHHH--C---SCEEEECSSS-----HH----HHH-T---TSCCEECCCTTCCCSHHHHHHHHHHHCCSSEE
T ss_pred eHHHHHHHHHHhh--C---CEEEEEcCCc-----HH----HHh-h---cCCeEEecCCCCCCCHHHHHHHHHHhCCCCcE
Confidence 4666677776532 2 3777774322 11 121 2 245556543 23 6889999999999888999
Q ss_pred EEEcCCCc-cCcCchHHHHHHHhcCCCEEEEe
Q psy1766 107 VFLDSHIE-VNTHWLEPLLVPIAERTNTVTVP 137 (214)
Q Consensus 107 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~ 137 (214)
+++++|.. ++++.+..+++. ..+.+ +++|
T Consensus 96 lv~~~D~P~i~~~~i~~l~~~-~~~~~-~~~~ 125 (201)
T 1e5k_A 96 LFCPCDTPYIPPDLAARLNHQ-RKDAP-VVWV 125 (201)
T ss_dssp EEEETTCTTCCTTHHHHHHHT-CTTCS-EEEE
T ss_pred EEEeCCcCcCCHHHHHHHHhh-cCCCC-EEEE
Confidence 99999994 688999999887 43333 3444
No 51
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=92.64 E-value=0.094 Score=39.15 Aligned_cols=60 Identities=8% Similarity=0.214 Sum_probs=43.3
Q ss_pred cEEEEEcCC-CcchHHHHHhhhhhcCC-CEEEEEcCCCc-cCcCchHHHHHHHhcCCCEEEEeee
Q psy1766 78 RVHLYRTSK-REGLIRARMFGAKYATG-KVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPII 139 (214)
Q Consensus 78 ~v~~i~~~~-~~G~~~a~n~g~~~a~g-d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~~~ 139 (214)
++ ++..+. ..|...+...|++.... ++++++++|.. ++++.+..+++.+ +....+++|..
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~ 123 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH 123 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe
Confidence 45 555332 35888888889988765 89999999995 6889999998877 44444555543
No 52
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=92.54 E-value=0.1 Score=38.67 Aligned_cols=90 Identities=9% Similarity=0.127 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcC-CCcEEEEEcCCCcchHHHHHhhhhhcCCCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLN-NGRVHLYRTSKREGLIRARMFGAKYATGKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~-~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~ 107 (214)
..+..+++.+.+.. -. +|+||-+... +...+.+.. .+. ..++.++. ....|.+.+...|++.. .+.++
T Consensus 28 pli~~~l~~l~~~~-~~---~v~vv~~~~~--~~i~~~~~~---~~~~~~~~~~~~-~~~~g~~~si~~al~~~-~~~vl 96 (196)
T 3rsb_A 28 CLIDYVVSPLLKSK-VN---NIFIATSPNT--PKTKEYINS---AYKDYKNIVVID-TSGKGYIEDLNECIGYF-SEPFL 96 (196)
T ss_dssp EHHHHHHHHHHSSS-CC---CEEEECCTTC--HHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEE
T ss_pred EHHHHHHHHHHHCC-CC---EEEEEeCCCh--HHHHHHHHh---hccCCCCEEEEE-CCCCCcHHHHHHHHHhC-CCCEE
Confidence 67888888887654 23 7777765433 333333333 120 12566665 33556666667777777 89999
Q ss_pred EEcCCCc-cCcCchHHHHHHHhc
Q psy1766 108 FLDSHIE-VNTHWLEPLLVPIAE 129 (214)
Q Consensus 108 ~lD~D~~-~~~~~l~~l~~~~~~ 129 (214)
++.+|.. +++..+..+++.+.+
T Consensus 97 v~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 97 VVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp EEETTEESCCHHHHHHHHHHHHH
T ss_pred EEeCCcccCCHHHHHHHHHHHHh
Confidence 9999986 589999999998864
No 53
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=92.09 E-value=0.73 Score=36.47 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=44.1
Q ss_pred CcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccC--cCchHHHHHHHhcCC
Q psy1766 77 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVN--THWLEPLLVPIAERT 131 (214)
Q Consensus 77 ~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~--~~~l~~l~~~~~~~~ 131 (214)
..+.++..+...|.+.+...|+.....+.++++.+|..+. +..+..+++...+..
T Consensus 106 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~ 162 (297)
T 2ux8_A 106 GNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVG 162 (297)
T ss_dssp TSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHC
T ss_pred CceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcC
Confidence 3577777667789999999998877678899999999987 678999998775433
No 54
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=92.06 E-value=1.2 Score=33.57 Aligned_cols=100 Identities=9% Similarity=0.019 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcC---CCcEEEEEcCCCcchHHHHHhhhhhc----
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLN---NGRVHLYRTSKREGLIRARMFGAKYA---- 101 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~---~~~v~~i~~~~~~G~~~a~n~g~~~a---- 101 (214)
..|..+|+.+.+..... +|+||-+... .+.++++..++. ...+.+.. ...|...+...|++..
T Consensus 32 pli~~~l~~l~~~~~~~---~i~vv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l~~~~~~~ 101 (236)
T 2vsh_A 32 PILIHTIEKFVLEPSIE---KIVVGVHGDW-----VSHAEDLVDKYLPLYKERIIITK--GGADRNTSIKNIIEAIDAYR 101 (236)
T ss_dssp EHHHHHHHHHHTCTTCC---CEEEEECGGG-----HHHHHHHHHHHCGGGGGGEEEEE--CCSSHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHcCCCCC---eEEEEeCHHH-----HHHHHHHHHhccccccCceEEEC--CCCchHHHHHHHHHHHHhhc
Confidence 57777888776543233 7777655321 123444333320 01233333 2346667777777765
Q ss_pred ---CCCEEEEEcCCC-ccCcCchHHHHHHHhcCC-CEEEEee
Q psy1766 102 ---TGKVLVFLDSHI-EVNTHWLEPLLVPIAERT-NTVTVPI 138 (214)
Q Consensus 102 ---~gd~i~~lD~D~-~~~~~~l~~l~~~~~~~~-~~vv~~~ 138 (214)
..++++++++|. .+++..+..+++.+.+.. ..+++|.
T Consensus 102 ~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 143 (236)
T 2vsh_A 102 PLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDAVDTVVEA 143 (236)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSEEEEEEEC
T ss_pred cCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCcEEEEEec
Confidence 348999999999 568889999999886544 2344444
No 55
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=91.80 E-value=2.5 Score=33.57 Aligned_cols=96 Identities=15% Similarity=0.265 Sum_probs=58.7
Q ss_pred EEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhh---cCCCcEEEEEcCCCcchHHHHHh
Q psy1766 20 IICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG---LNNGRVHLYRTSKREGLIRARMF 96 (214)
Q Consensus 20 IIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~---~~~~~v~~i~~~~~~G~~~a~n~ 96 (214)
.+|.++. ..|...|+.+.... . .+|+||-.... .+.++++... + +..+.++..+...|.+.+.-.
T Consensus 28 llpi~gk--pli~~~l~~l~~~g-i---~~Iivv~~~~~-----~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~ 95 (295)
T 1lvw_A 28 LLPIYDK--PMIYYPLSVLMLAG-I---RDILIISTPRD-----LPLYRDLLGDGSQF-GVRFSYRVQEEPRGIADAFIV 95 (295)
T ss_dssp GSEETTE--ETTHHHHHHHHHTT-C---CEEEEEECTTT-----HHHHHHHHTTSGGG-TSEEEEEECSSCCCGGGHHHH
T ss_pred ecEECCe--eHHHHHHHHHHHCC-C---CeEEEEeccch-----HHHHHHHhhhcccc-CceEEEeeCCCCCChHHHHHH
Confidence 3556664 46666777766543 2 38887754322 2234444432 2 234666666666788888888
Q ss_pred hhhhcC-CCEEEEEcCCCccCcCchHHHHHHHh
Q psy1766 97 GAKYAT-GKVLVFLDSHIEVNTHWLEPLLVPIA 128 (214)
Q Consensus 97 g~~~a~-gd~i~~lD~D~~~~~~~l~~l~~~~~ 128 (214)
|++... .++++++ +|..+...-+..+++...
T Consensus 96 a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 96 GKDFIGDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp THHHHTTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred HHHHhCCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 887765 4555555 888764467888887774
No 56
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=91.72 E-value=0.92 Score=36.34 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=63.1
Q ss_pred chHHHHHHHHH-HhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCC--------cc----hHHHH
Q psy1766 28 PATLYRSVQTL-LSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKR--------EG----LIRAR 94 (214)
Q Consensus 28 ~~~l~~~l~sl-~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~--------~G----~~~a~ 94 (214)
+..+..++.|+ +..+..+ ..+.|+.++-+ ++..+.++++...+ +..++++..+.. .+ ....|
T Consensus 12 ~~~~~vli~Sl~l~~~~~~--~~f~il~~~ls--~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~R 86 (311)
T 1g9r_A 12 AAYLCVAAKSVEAAHPDTE--IRFHVLDAGIS--EANRAAVAANLRGG-GGNIRFIDVNPEDFAGFPLNIRHISITTYAR 86 (311)
T ss_dssp HHHHHHHHHHHHHTCTTSC--CEEEEEESSCC--HHHHHHHHHHSGGG-TTTEEEEECCGGGGTTSCCCCTTCCGGGGGG
T ss_pred HHHHHHHHHHHHHHcCCCC--ceEEEEECCCC--HHHHHHHHHHHHHc-CCEEEEEEcCHHHHhcCccccccCCHHHHHH
Confidence 57788899999 7766444 58888888766 67777888876654 456777654311 11 11112
Q ss_pred Hhhhhh-cCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEEe
Q psy1766 95 MFGAKY-ATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVP 137 (214)
Q Consensus 95 n~g~~~-a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~~ 137 (214)
-..... ..-+-|+++|+|..+..+ +.++.+.=..+...++++
T Consensus 87 l~l~~ll~~~~kvlyLD~D~iv~~d-i~eL~~~~l~~~~~aav~ 129 (311)
T 1g9r_A 87 LKLGEYIADCDKVLYLDIDVLVRDS-LTPLWDTDLGDNWLGASI 129 (311)
T ss_dssp GGHHHHCCSCSCEEEECSSEEECSC-CHHHHTCCCTTCSEEEEE
T ss_pred HHHHHHhhhcCEEEEEcCCeEeccC-HHHHhccCCCCcEEEEEe
Confidence 122222 245889999999998766 555554312334455554
No 57
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=91.58 E-value=2.4 Score=31.57 Aligned_cols=89 Identities=7% Similarity=0.033 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhc-CCCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA-TGKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a-~gd~i~ 107 (214)
..|..+++.+.+..... +|+||-+... .+.++++.. ...+.++.. ..+.+.+...|++.. ..++++
T Consensus 31 pli~~~l~~l~~~~~~~---~i~vv~~~~~-----~~~~~~~~~---~~~v~~~~~--~~~~~~~i~~al~~~~~~~~vl 97 (223)
T 2xwl_A 31 PLLEHALSGLRASGVID---RIVIAVPPAL-----TDESKLVFG---GEDSVIVSG--GVDRTESVALALEAAGDAEFVL 97 (223)
T ss_dssp EHHHHHHHHHHHHSCCS---EEEEEECGGG-----HHHHHHHTC---BTTEEEEEC--CSSHHHHHHHHHTTCTTCSEEE
T ss_pred EHHHHHHHHHhcCCCCC---eEEEEEcccH-----HHHHHHHhc---cCCeEEEcC--CCCHHHHHHHHHHhcCCCCEEE
Confidence 57777787776544233 7777765322 223333321 135766653 245677788888877 678999
Q ss_pred EEcCCCc-cCcCchHHHHHHH-hcC
Q psy1766 108 FLDSHIE-VNTHWLEPLLVPI-AER 130 (214)
Q Consensus 108 ~lD~D~~-~~~~~l~~l~~~~-~~~ 130 (214)
++++|.. +++..+..+++.+ .+.
T Consensus 98 v~~~D~P~~~~~~i~~l~~~~~~~~ 122 (223)
T 2xwl_A 98 VHDAARALTPPALIARVVAALKEGH 122 (223)
T ss_dssp ECCTTCTTCCHHHHHHHHHHHHHTC
T ss_pred EEcCCcccCCHHHHHHHHHHHhhcC
Confidence 9999985 5888999999887 443
No 58
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=91.43 E-value=3.3 Score=30.59 Aligned_cols=94 Identities=14% Similarity=0.045 Sum_probs=60.3
Q ss_pred CCCCceEEEEEEeCCC--------------chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCC
Q psy1766 12 STLPSTSVIICFYNEH--------------PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNG 77 (214)
Q Consensus 12 ~~~p~vSVIIp~~n~~--------------~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~ 77 (214)
+.|+++.+||++-... ...+..+++.+... . .+|+||-+... . +.+ .
T Consensus 10 ~~~~~~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~~--~---~~i~vv~~~~~--~------~~~-----~- 70 (201)
T 2e8b_A 10 SLSKVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSV--F---KEVYIVAKDRE--K------FSF-----L- 70 (201)
T ss_dssp TSCSCCEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTT--C---SEEEEEESCSG--G------GGG-----G-
T ss_pred CcccCceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHHh--C---CEEEEEeCcHH--H------hhc-----C-
Confidence 3455678888886543 12333445444333 2 38888765432 2 111 0
Q ss_pred cEEEEEcC-CCcchHHHHHhhhhhcCCCEEEEEcCCCcc-CcCchHH-HH
Q psy1766 78 RVHLYRTS-KREGLIRARMFGAKYATGKVLVFLDSHIEV-NTHWLEP-LL 124 (214)
Q Consensus 78 ~v~~i~~~-~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~-~~~~l~~-l~ 124 (214)
+++++..+ ...|.+.+...|++....+.++++.+|..+ +++.+.. ++
T Consensus 71 ~~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 71 NAPVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp TCCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 34455533 457899999999998888999999999864 7888887 76
No 59
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=91.22 E-value=2.4 Score=35.68 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC--CCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT--GKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~--gd~i 106 (214)
..|..+|+.+.+.. . .+|+|+-+... +.+.++.. ..+.++..+...|.+.+...|++... .+++
T Consensus 40 pli~~~l~~l~~~g-~---~~iivv~~~~~------~~i~~~~~----~~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~v 105 (468)
T 1hm9_A 40 SMLEHVFRSVGAIQ-P---EKTVTVVGHKA------ELVEEVLA----GQTEFVTQSEQLGTGHAVMMTEPILEGLSGHT 105 (468)
T ss_dssp EHHHHHHHHHHTTC-C---SEEEEEECTTH------HHHHHSSS----SSSEEEECSSCCCHHHHHHTTHHHHTTCCSEE
T ss_pred cHHHHHHHHHHhcC-C---CCEEEEECCCH------HHHHHHhC----CCcEEEeCCccCChHHHHHHHHHHhccCCCeE
Confidence 67788888876553 2 37777754321 22333221 15677776667799999988888765 6899
Q ss_pred EEEcCCCc-cCcCchHHHHHHHhcCC
Q psy1766 107 VFLDSHIE-VNTHWLEPLLVPIAERT 131 (214)
Q Consensus 107 ~~lD~D~~-~~~~~l~~l~~~~~~~~ 131 (214)
+++++|.. +.+..+..+++.+.+..
T Consensus 106 lv~~~D~P~i~~~~i~~l~~~~~~~~ 131 (468)
T 1hm9_A 106 LVIAGDTPLITGESLKNLIDFHINHK 131 (468)
T ss_dssp EEEETTCTTCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCccccCHHHHHHHHHHHHhcC
Confidence 99999996 57888999998875543
No 60
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=91.15 E-value=2.1 Score=34.09 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC---------------CCcchHHH
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS---------------KREGLIRA 93 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~---------------~~~G~~~a 93 (214)
..|..+|+.+.+... .+|+||-..... +...+.+...... ...+.++..+ ...|.+.|
T Consensus 34 pli~~~l~~~~~~~~----~~i~vv~~~~~~-~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~a 106 (303)
T 3pnn_A 34 TIMDYSVYDAIRAGF----GRLVFVIRHSFE-KEFREKILTKYEG--RIPVELVFQELDRLPEGFSCPEGREKPWGTNHA 106 (303)
T ss_dssp CHHHHHHHHHHHHTC----CEEEEEECGGGH-HHHHHHTHHHHTT--TSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHH
T ss_pred eHHHHHHHHHHHCCC----CeEEEEcCchHH-HHHHHHHHHHhcc--CCcEEEEecccccccccccccccccccCCcHHH
Confidence 567777777765432 377777653310 1222222221111 2457777655 46899999
Q ss_pred HHhhhhhcCCCEEEEEcCCCccCcCchHHHHHHHhc
Q psy1766 94 RMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAE 129 (214)
Q Consensus 94 ~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~ 129 (214)
...+......++ +++.+|..+..+.+..+++...+
T Consensus 107 l~~a~~~i~~~~-lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 107 VLMGRDAIREPF-AVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp HHTTTTTCCSCE-EEEESSCBCCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCE-EEEECCeecCHHHHHHHHHHHHH
Confidence 999988885554 55679988888889999988754
No 61
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=90.92 E-value=1.3 Score=37.13 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcC-CCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT-GKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~-gd~i~ 107 (214)
..|..+|+.+.+.. . .+|+|+-+... +.++++..++ .++++..+...|.+.+...|++... .++++
T Consensus 34 pli~~~l~~l~~~~-~---~~iivv~~~~~------~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vl 100 (456)
T 2v0h_A 34 PMVKHVIDTAHQLG-S---ENIHLIYGHGG------DLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKDNENIV 100 (456)
T ss_dssp EHHHHHHHHHHHTT-C---SCEEEEECTTH------HHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCTTSEEE
T ss_pred cHHHHHHHHHHhCC-C---CcEEEEeCCCH------HHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEE
Confidence 56667787776653 2 27777654321 2344443332 5677776667788888888888875 78999
Q ss_pred EEcCCCc-cCcCchHHHHHHHhc
Q psy1766 108 FLDSHIE-VNTHWLEPLLVPIAE 129 (214)
Q Consensus 108 ~lD~D~~-~~~~~l~~l~~~~~~ 129 (214)
++++|.. +.+..+..+++.+.+
T Consensus 101 v~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 101 VLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp EEETTCTTCCHHHHHHHHHHCCT
T ss_pred EEcCCcceeCHHHHHHHHHHHhc
Confidence 9999995 678889999887755
No 62
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.26 E-value=1.1 Score=36.11 Aligned_cols=55 Identities=18% Similarity=0.018 Sum_probs=42.2
Q ss_pred cEEEEEcCCCcchHHHHHhhhhhcCC--CEEEEEcCCCccC-cCchHHHHHHHhcCCC
Q psy1766 78 RVHLYRTSKREGLIRARMFGAKYATG--KVLVFLDSHIEVN-THWLEPLLVPIAERTN 132 (214)
Q Consensus 78 ~v~~i~~~~~~G~~~a~n~g~~~a~g--d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~ 132 (214)
.+.++..+...|.+.+...|+..... ++++++.+|..+. +..+..+++.+.+...
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~ 163 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG 163 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence 56667666678999999998887643 4588899999986 5889999988765443
No 63
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=90.21 E-value=1.7 Score=34.41 Aligned_cols=53 Identities=11% Similarity=0.121 Sum_probs=41.8
Q ss_pred cEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCccC----cC---chHHHHHHHhcC
Q psy1766 78 RVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVN----TH---WLEPLLVPIAER 130 (214)
Q Consensus 78 ~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~~----~~---~l~~l~~~~~~~ 130 (214)
.+.++......|.+.+...|+.....+.++++.+|..+. +. .+..+++...+.
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 566676667789999999888877667889999999886 45 689998877543
No 64
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=90.13 E-value=2.9 Score=33.20 Aligned_cols=95 Identities=16% Similarity=0.312 Sum_probs=57.0
Q ss_pred EEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhh---cCCCcEEEEEcCCCcchHHHHHhh
Q psy1766 21 ICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG---LNNGRVHLYRTSKREGLIRARMFG 97 (214)
Q Consensus 21 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~---~~~~~v~~i~~~~~~G~~~a~n~g 97 (214)
+|.++. ..|...|+.+.... . .+|+||-.... .+.++++... + +.++.++..+...|.+.+.-.|
T Consensus 29 lpi~gk--pli~~~l~~l~~~g-i---~~I~vv~~~~~-----~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a 96 (296)
T 1mc3_A 29 LPIYDK--PMIYYPLSVLMLAG-I---REILIITTPED-----KGYFQRLLGDGSEF-GIQLEYAEQPSPDGLAQAFIIG 96 (296)
T ss_dssp SEETTE--ETTHHHHHHHHHTT-C---CEEEEEECTTT-----HHHHHHHHTTSGGG-TCEEEEEECSSCCCSTHHHHHT
T ss_pred eEECCe--eHHHHHHHHHHhCC-C---CcEEEEechhH-----HHHHHHHHhccccc-CceEEEeccCCCCCHHHHHHHH
Confidence 455554 46666676665432 2 38887764322 2234444432 2 2346666666667888888888
Q ss_pred hhhcCC-CEEEEEcCCCccCcCchHHHHHHHh
Q psy1766 98 AKYATG-KVLVFLDSHIEVNTHWLEPLLVPIA 128 (214)
Q Consensus 98 ~~~a~g-d~i~~lD~D~~~~~~~l~~l~~~~~ 128 (214)
++.... ++++++ +|..+....+..+++...
T Consensus 97 ~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (296)
T 1mc3_A 97 ETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVA 127 (296)
T ss_dssp HHHHTTSCEEEEE-TTEEEECSSCHHHHHHHT
T ss_pred HHHhCCCCEEEEE-CCccccccCHHHHHHHHH
Confidence 877654 555555 887764466788877764
No 65
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=88.25 E-value=2.1 Score=32.33 Aligned_cols=100 Identities=11% Similarity=0.162 Sum_probs=60.1
Q ss_pred CCCceEEEEEEeCCC---------------chHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCC
Q psy1766 13 TLPSTSVIICFYNEH---------------PATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNG 77 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~---------------~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~ 77 (214)
.|+++.+||++-... ...+..+++.+.+. . .+|+||- ... + ++.+.+..++ +.
T Consensus 15 ~m~~~~~iIlA~G~g~R~~~~~K~l~~i~g~pli~~~l~~l~~~--~---~~i~vv~-~~~--~---~~~~~~~~~~-~~ 82 (232)
T 2xme_A 15 RIKLMKAVILAAGLGTRLGGVPKPLVRVGGCEIILRTMKLLSPH--V---SEFIIVA-SRY--A---DDIDAFLKDK-GF 82 (232)
T ss_dssp -CCCEEEEEEECC------CCCGGGCEETTEEHHHHHHHHHGGG--E---EEEEEEE-STT--H---HHHHHHHTTS-CC
T ss_pred ccccceEEEECCcCcCcCCCCCcEEeEECCEEHHHHHHHHHHHh--C---CEEEEEe-CCh--H---HHHHHHHHhc-CC
Confidence 355677777764332 14455566666544 2 3777776 322 2 2333333333 34
Q ss_pred cEEEEEcCCC-cchHHHHHhhhhhcCCCEEEEEcCCCccCcCchHHHHH
Q psy1766 78 RVHLYRTSKR-EGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLV 125 (214)
Q Consensus 78 ~v~~i~~~~~-~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~ 125 (214)
++.++..+.. .|.+.+...|++....+ ++++.+|..++++.++.+++
T Consensus 83 ~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 83 NYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp CEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEEETTEEECHHHHHHHTT
T ss_pred cEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEEcCCcccCHHHHHHHHh
Confidence 6788775433 68888999999888744 55788998777776766654
No 66
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=84.87 E-value=5.4 Score=29.62 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=42.7
Q ss_pred cEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCcc-CcCchHHHHHHHhcCCCEEEEee
Q psy1766 78 RVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEV-NTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 78 ~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
++.++..+ .|.+.+...|++.. .+.++++-+|... +++.+..+++ .+.+.+++|.
T Consensus 66 ~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~---~~~~~vv~p~ 121 (211)
T 2i5e_A 66 EARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS---TEKDVCIVPG 121 (211)
T ss_dssp SSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT---CSSSEEEEEC
T ss_pred CCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc---cCCCeEEEEe
Confidence 56677655 78999999998877 6889999999874 8888888877 4456677764
No 67
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=84.77 E-value=5.1 Score=32.41 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=49.8
Q ss_pred CCceEEEEEEeCCC-chHHHHHHHHHHhcCCCCCccEEE-EEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCC-c--
Q psy1766 14 LPSTSVIICFYNEH-PATLYRSVQTLLSRTGQSLLHEII-LVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKR-E-- 88 (214)
Q Consensus 14 ~p~vSVIIp~~n~~-~~~l~~~l~sl~~q~~~~~~~eii-vVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~-~-- 88 (214)
|.+...|+.+-|.. +..+..++.||...... ..++ +++++-+ +...+.++++ . ..+..+..-.. .
T Consensus 1 Ms~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~---~~l~vlv~~~is--~~~~~~L~~~---~--~~v~~v~~l~~~~~~ 70 (333)
T 1ll2_A 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTS---RRLAVLTTPQVS--DTMRKALEIV---F--DEVITVDILDSGDSA 70 (333)
T ss_dssp CCSEEEEEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSC--HHHHHHHHHH---C--SEEEECCTTSTTSTT
T ss_pred CCceEEEEEEeCHHHHHHHHHHHHHHHHhCCC---CCEEEEEcCCCC--HHHHHHHHHh---C--CEEEEEeecCCcchh
Confidence 33444555555554 45556667787765433 3554 4444433 3444444443 1 33444432111 0
Q ss_pred ----------chHHHHHhhhhhcCCCEEEEEcCCCccCcC
Q psy1766 89 ----------GLIRARMFGAKYATGKVLVFLDSHIEVNTH 118 (214)
Q Consensus 89 ----------G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~ 118 (214)
.....+-........+-|++||+|..+..+
T Consensus 71 ~~~~~~~~~~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 71 HLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp HHHHHHCGGGHHHHHHGGGGGCTTCSEEEEECTTEEECSC
T ss_pred hcccccccchHHHHHHHHHhHhcCCCeEEEEeCCEEeccC
Confidence 112233344444567899999999998655
No 68
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=83.46 E-value=4.2 Score=30.50 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhc---CCCE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKV 105 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a---~gd~ 105 (214)
..|..+++.+.+..... +|+||-+... .+.++++.. + ...+.+.. ...+...+...|++.+ ..++
T Consensus 42 pli~~~i~~l~~~~~~~---~ivVv~~~~~-----~~~~~~~~~-~-~~~~~~~~--gg~~~~~sv~~al~~~~~~~~~~ 109 (234)
T 1vpa_A 42 MLFEYPLSTFLKSEAID---GVVIVTRREW-----FEVVEKRVF-H-EKVLGIVE--GGDTRSQSVRSALEFLEKFSPSY 109 (234)
T ss_dssp ETTHHHHHHHHHCTTCS---EEEEEECGGG-----HHHHHTTCC-C-TTEEEEEE--CCSSHHHHHHHHHHHHGGGCCSE
T ss_pred EHHHHHHHHHHcCCCCC---eEEEEEChHH-----HHHHHHHhc-c-CCceEEeC--CCCcHHHHHHHHHHHhhhcCCCE
Confidence 56666777776543233 8888765322 122233211 1 12333322 1223555566666655 3689
Q ss_pred EEEEcCCCc-cCcCchHHHHHHHhcC
Q psy1766 106 LVFLDSHIE-VNTHWLEPLLVPIAER 130 (214)
Q Consensus 106 i~~lD~D~~-~~~~~l~~l~~~~~~~ 130 (214)
++++++|.. ++++.+..+++.+.+.
T Consensus 110 vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 110 VLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp EEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred EEEecCcccCCCHHHHHHHHHHHHhc
Confidence 999999985 6888999999877543
No 69
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=83.43 E-value=13 Score=28.42 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=44.8
Q ss_pred cEEEEEcCCCcchHHHHHhhhhhc---CCCEEEEEcCCCc-cCcCchHHHHHHHhcCCCEEEEee
Q psy1766 78 RVHLYRTSKREGLIRARMFGAKYA---TGKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 78 ~v~~i~~~~~~G~~~a~n~g~~~a---~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
.+.+.. +...|.+..++.|++.+ ..+-++++-+|.- +++..|..+++.+.. .+.+++|.
T Consensus 76 ~~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~-~d~VigPa 138 (242)
T 3cgx_A 76 QHMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH-YDAAIGPA 138 (242)
T ss_dssp TSEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT-CSEEEEEB
T ss_pred CcEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc-CCeEEEEc
Confidence 455554 45678999999999876 4577999999988 588999999887755 56777764
No 70
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=77.74 E-value=12 Score=30.04 Aligned_cols=94 Identities=11% Similarity=0.173 Sum_probs=53.7
Q ss_pred EEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhh
Q psy1766 21 ICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKY 100 (214)
Q Consensus 21 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~ 100 (214)
+|..++. ..|..+++.+....... +|+||-+.. ....+.+..... ....++..+...|.+.+.-.++..
T Consensus 28 l~l~g~~-pli~~~l~~l~~~~~~~---~iivvt~~~-----~~~~i~~~l~~~--~~~~ii~e~~~~gta~ai~~a~~~ 96 (336)
T 2x65_A 28 LKLFGNK-SLMRWTFERVLEEMDPK---DVIVVTHKD-----YVERTKKELPEL--PDENIIAEPMKKNTAPACFIGTKL 96 (336)
T ss_dssp CCCBTTB-CHHHHHHHHHHTTCCGG---GEEEEEEGG-----GHHHHHHHCTTS--CGGGEEEESSCCCHHHHHHHHHTT
T ss_pred EECCCCC-cHHHHHHHHHhccCCCC---cEEEEcChH-----HHHHHHHHhhcc--ccceEEeCCCCCCcHHHHHHHHHh
Confidence 4455545 78888888886643222 666665432 122333333322 122344445667877777766665
Q ss_pred cC-CCEEEEEcCCCccC-cCchHHHHH
Q psy1766 101 AT-GKVLVFLDSHIEVN-THWLEPLLV 125 (214)
Q Consensus 101 a~-gd~i~~lD~D~~~~-~~~l~~l~~ 125 (214)
.. .++++++.+|..+. ++.+..+++
T Consensus 97 ~~~~~~~lvl~~D~~~~~~~~~~~~l~ 123 (336)
T 2x65_A 97 ADDDEPVLVLPADHRIPDTKKFWKTVK 123 (336)
T ss_dssp SCTTCEEEEEETTCBCCCHHHHHHHHH
T ss_pred hCCCCEEEEEcCCceeccHHHHHHHHH
Confidence 43 57899999998874 444444433
No 71
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=77.21 E-value=13 Score=28.58 Aligned_cols=94 Identities=6% Similarity=-0.035 Sum_probs=55.9
Q ss_pred EEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcE-EEEEcCCCcchHHHHHhhhh
Q psy1766 21 ICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRV-HLYRTSKREGLIRARMFGAK 99 (214)
Q Consensus 21 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v-~~i~~~~~~G~~~a~n~g~~ 99 (214)
+|..+ . ..|..+|+++.+..... +|+||-.... + ..+.+++...++....+ .++..+...|.+.|.-.|+.
T Consensus 25 lpv~g-k-pli~~~l~~l~~~~gi~---~iivv~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~ 96 (255)
T 4evw_A 25 LEAHG-Q-TLFEHSVNSFAAYFAST---PFLFIVRNVY--D-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLE 96 (255)
T ss_dssp CEETT-E-EHHHHHHGGGGGGTTTS---CEEEEEESST--T-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHH
T ss_pred cEECC-e-EHHHHHHHHHhccCCCc---eEEEEECchh--h-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHH
Confidence 44444 3 67788888776532223 7666665443 3 55555554443311232 33444567788899888887
Q ss_pred hc------CCCEEEEEcCCCccCcCchHH
Q psy1766 100 YA------TGKVLVFLDSHIEVNTHWLEP 122 (214)
Q Consensus 100 ~a------~gd~i~~lD~D~~~~~~~l~~ 122 (214)
.. ..+-++++.+|..+.+.-+..
T Consensus 97 ~l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 97 ELAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp HHHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred HHhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 76 245688899998775444443
No 72
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=77.18 E-value=13 Score=30.84 Aligned_cols=105 Identities=15% Similarity=-0.004 Sum_probs=59.2
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEc--CCCcc-
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRT--SKREG- 89 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~--~~~~G- 89 (214)
.+++++.+|.+|+.. +.+++.++.+. .+.+ .-+|-||-.++ +...+.+.+....+ ++|.++.. .-..|
T Consensus 82 ~~~kiAflil~h~d~-~~l~rll~~ly--~p~n--~y~IHvD~ks~--~~~~~~~~~~~~~f--~NV~v~~~~~~v~WGg 152 (391)
T 2gak_A 82 VGFPIAYSIVVHHKI-EMLDRLLRAIY--MPQN--FYCIHVDRKAE--ESFLAAVQGIASCF--DNVFVASQLESVVYAS 152 (391)
T ss_dssp HTSCEEEEEEECSCH-HHHHHHHHHHC--CTTS--EEEEEECTTSC--HHHHHHHHHHHHTC--TTEEECSSCCCCCTTS
T ss_pred cCCCEEEEEEecCCH-HHHHHHHHHHh--CCCC--eEEEEEeCCCC--HHHHHHHHHHHhcC--CCEEEeccCcccccCC
Confidence 346899999999876 77777776662 1222 23344565555 34444444444444 68887632 22233
Q ss_pred --hHHHHHhhhhhc-----CCCEEEEEcCCCccC--cCchHHHHHH
Q psy1766 90 --LIRARMFGAKYA-----TGKVLVFLDSHIEVN--THWLEPLLVP 126 (214)
Q Consensus 90 --~~~a~n~g~~~a-----~gd~i~~lD~D~~~~--~~~l~~l~~~ 126 (214)
...|--.+++.| .-+|++.|-+.|.+- .+.|...+..
T Consensus 153 ~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 153 WTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp HHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 233333333332 569999998877753 3445444443
No 73
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=77.09 E-value=7.8 Score=30.26 Aligned_cols=95 Identities=9% Similarity=0.087 Sum_probs=48.9
Q ss_pred CCceEEEEEEeCCC-chHHHHHHHHHHhcCCCCCccEEEE-EECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcc--
Q psy1766 14 LPSTSVIICFYNEH-PATLYRSVQTLLSRTGQSLLHEIIL-VNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREG-- 89 (214)
Q Consensus 14 ~p~vSVIIp~~n~~-~~~l~~~l~sl~~q~~~~~~~eiiv-Vdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G-- 89 (214)
|.+...|.-+.|.. +..+..++.||...... ..++| ++++-+ +...+.++++ ...+..+..-....
T Consensus 2 ~~~~AyvTl~td~~Yl~ga~vL~~SL~~~~s~---~~lvvLvt~~vs--~~~~~~L~~~-----~~~vi~V~~l~~~~~~ 71 (263)
T 3u2u_A 2 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTT---RRLVVLATPQVS--DSMRKVLETV-----FDEVIMVDVLDSGDSA 71 (263)
T ss_dssp TTTEEEEEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSC--HHHHHHHHHH-----SSEEEECCCCCCCCHH
T ss_pred CcceEEEEEEECHHHHHHHHHHHHHHHHhCCC---CCEEEEecCCCC--HHHHHHHHHc-----CCeEEEeeecCCcchh
Confidence 44455555566654 45566677777764433 35544 444433 4455555543 23443333111111
Q ss_pred -----------hHHHHHhhhhhcCCCEEEEEcCCCccCcC
Q psy1766 90 -----------LIRARMFGAKYATGKVLVFLDSHIEVNTH 118 (214)
Q Consensus 90 -----------~~~a~n~g~~~a~gd~i~~lD~D~~~~~~ 118 (214)
....+-...+....+-|+++|+|..+-.+
T Consensus 72 ~~~~~~rp~~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 72 HLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLAN 111 (263)
T ss_dssp HHHHTTCTTGGGGGGGGGGGGCTTCSEEEEECTTEEECSC
T ss_pred hhhhhcCcchhHHhHHHHhccccCcceEEEEcCCEeeccC
Confidence 11111122333357889999999998665
No 74
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=76.45 E-value=18 Score=27.40 Aligned_cols=50 Identities=6% Similarity=-0.113 Sum_probs=34.5
Q ss_pred CCCcchHHHHHhhhhhc-CCCEEEEEcCCCccCcCchHHHHHHHhc-CCCEEE
Q psy1766 85 SKREGLIRARMFGAKYA-TGKVLVFLDSHIEVNTHWLEPLLVPIAE-RTNTVT 135 (214)
Q Consensus 85 ~~~~G~~~a~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~vv 135 (214)
....|.+.+...|+... ..+.++++.+|... +.-+..+++...+ +....+
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~t~ 154 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVA-DLDIKATIDFHKAHGKKATL 154 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEEE-CCCHHHHHHHHHHHCCSEEE
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEec-ccCHHHHHHHHHHhCCeEEE
Confidence 34578888888888776 45778888899854 5568888877643 444433
No 75
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=73.49 E-value=17 Score=29.99 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcC------CCcEEEEEcC----CC---cchHHHHHh
Q psy1766 30 TLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLN------NGRVHLYRTS----KR---EGLIRARMF 96 (214)
Q Consensus 30 ~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~------~~~v~~i~~~----~~---~G~~~a~n~ 96 (214)
.|..+|+.+.+.. . .+|+|+-+... +...+.+.+ .+. ...+.++... .. .|.+.+...
T Consensus 46 li~~~l~~l~~~g-i---~~i~vv~~~~~--~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~ 116 (420)
T 3brk_X 46 IIDFALSNALNSG-I---RRIGVATQYKA--HSLIRHLQR---GWDFFRPERNESFDILPASQRVSETQWYEGTADAVYQ 116 (420)
T ss_dssp THHHHHHHHHHTT-C---CEEEEEECTTC--HHHHHHHHH---HSCCCCGGGTCEEEEECCC-------CCCCHHHHHHT
T ss_pred HHHHHHHHHHhCC-C---CeEEEEeCCCh--HHHHHHHhh---hhccccccccCCEEEeCccccccCCccccCCHHHHHH
Confidence 5556777766543 2 37877765433 222222222 121 0135554321 12 688888888
Q ss_pred hhhhcC---CCEEEEEcCCCccCcCchHHHHHHHhc
Q psy1766 97 GAKYAT---GKVLVFLDSHIEVNTHWLEPLLVPIAE 129 (214)
Q Consensus 97 g~~~a~---gd~i~~lD~D~~~~~~~l~~l~~~~~~ 129 (214)
|+.... .+.++++.+|.... .-+..+++...+
T Consensus 117 a~~~l~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 151 (420)
T 3brk_X 117 NIDIIEPYAPEYMVILAGDHIYK-MDYEYMLQQHVD 151 (420)
T ss_dssp THHHHHHHCCSEEEEEESSCEEC-BCTHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEecccEEEc-hHHHHHHHHHHH
Confidence 887653 48899999999654 457888877754
No 76
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=70.87 E-value=30 Score=28.68 Aligned_cols=94 Identities=15% Similarity=0.082 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHh-hc----CCCcEEEEEc--C-----CCcchHHHHHh
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVK-GL----NNGRVHLYRT--S-----KREGLIRARMF 96 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~-~~----~~~~v~~i~~--~-----~~~G~~~a~n~ 96 (214)
..|..+|+.+.+.. . .+|+||-.... +...+.+.+... .. ....++++.. . ...|.+.+...
T Consensus 53 pli~~~l~~l~~~g-~---~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~ 126 (451)
T 1yp2_A 53 RLIDIPVSNCLNSN-I---SKIYVLTQFNS--ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQ 126 (451)
T ss_dssp ETTHHHHHHHHHTT-C---CEEEEEESCCC--HHHHHHHHHHCC--------CCEEEEEESCSSTTSCCCCCSHHHHHHH
T ss_pred eeHHHHHHHHHHCC-C---CEEEEEeccCH--HHHHHHHhhhhhcccccccccCcEEEecccccccccccccCcHHHHHH
Confidence 35566777766543 2 37877775443 223233322100 00 0112455531 1 13688888888
Q ss_pred hhhhcC---CCEEEEEcCCCccCcCchHHHHHHHhc
Q psy1766 97 GAKYAT---GKVLVFLDSHIEVNTHWLEPLLVPIAE 129 (214)
Q Consensus 97 g~~~a~---gd~i~~lD~D~~~~~~~l~~l~~~~~~ 129 (214)
|+.... .+.++++.+|.... .-+..+++...+
T Consensus 127 a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 161 (451)
T 1yp2_A 127 YLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRE 161 (451)
T ss_dssp THHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHH
Confidence 887664 58899999999654 457888877644
No 77
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=68.52 E-value=16 Score=27.41 Aligned_cols=85 Identities=14% Similarity=0.165 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 108 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~ 108 (214)
..|..+++.+.... .+|+||-+ . +.. ++ + .++++ ....|.+.+...|++... +.+++
T Consensus 33 pll~~~l~~l~~~~-----~~ivvv~~--~--~~i----~~----~--~~~~~---~~~~g~~~~i~~a~~~~~-~~~lv 89 (232)
T 2dpw_A 33 PMVEWVLEALYAAG-----LSPVYVGE--N--PGL----VP----A--PALTL---PDRGGLLENLEQALEHVE-GRVLV 89 (232)
T ss_dssp ETHHHHHHHHHHTT-----CEEEEESC--C--SSC----SS----C--CSEEE---CCCSSHHHHHHHHHHTCC-SEEEE
T ss_pred EHHHHHHHHHHhcC-----CEEEEEeC--h--HHH----hh----h--cCeEe---cCCCCHHHHHHHHHHHcC-CCEEE
Confidence 57777887776542 27777622 2 121 11 1 13444 456788899999998877 89999
Q ss_pred EcCCCc-cCcCchHHHHHHHhcCCCEEEEee
Q psy1766 109 LDSHIE-VNTHWLEPLLVPIAERTNTVTVPI 138 (214)
Q Consensus 109 lD~D~~-~~~~~l~~l~~~~~~~~~~vv~~~ 138 (214)
+++|.. +.+..+..+++ ...+.. ++++.
T Consensus 90 ~~~D~P~~~~~~i~~l~~-~~~~~~-~~~~~ 118 (232)
T 2dpw_A 90 ATGDIPHLTEEAVRFVLD-KAPEAA-LVYPI 118 (232)
T ss_dssp EETTCTTCCHHHHHHHHH-HCCSCS-EEEEE
T ss_pred EeCCcccCCHHHHHHHHh-cCCCCC-EEEEE
Confidence 999996 58888999988 433333 44443
No 78
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=66.55 E-value=19 Score=27.52 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCC--CcchHHHHHhhhhhcCCCEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSK--REGLIRARMFGAKYATGKVL 106 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~--~~G~~~a~n~g~~~a~gd~i 106 (214)
..|..+|+.+.+.. . .+|+||-+... +...+.. ..+ +++++..+. ..|.+.+...|+.... + +
T Consensus 57 pli~~~l~~l~~~g-~---~~i~vv~~~~~--~~i~~~~----~~~---~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~ 121 (254)
T 1jyk_A 57 PLIEYQIEFLKEKG-I---NDIIIIVGYLK--EQFDYLK----EKY---GVRLVFNDKYADYNNFYSLYLVKEELA-N-S 121 (254)
T ss_dssp EHHHHHHHHHHHTT-C---CCEEEEECTTG--GGGTHHH----HHH---CCEEEECTTTTTSCTHHHHHTTGGGCT-T-E
T ss_pred EHHHHHHHHHHHCC-C---CeEEEEeCCcH--HHHHHHH----HhC---CcEEEECCCccCCCcHHHHHHHHHHCC-C-E
Confidence 45556777766543 2 26776665433 3333333 232 466666543 3577777777777664 4 5
Q ss_pred EEEcCCCccCcCchHHHH
Q psy1766 107 VFLDSHIEVNTHWLEPLL 124 (214)
Q Consensus 107 ~~lD~D~~~~~~~l~~l~ 124 (214)
+++.+|..+..+.+..++
T Consensus 122 lv~~~D~~~~~~~~~~~~ 139 (254)
T 1jyk_A 122 YVIDADNYLFKNMFRNDL 139 (254)
T ss_dssp EEEETTEEESSCCCCSCC
T ss_pred EEEeCCcccCHHHHHHHH
Confidence 678999887667665543
No 79
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=58.05 E-value=11 Score=28.41 Aligned_cols=52 Identities=8% Similarity=-0.075 Sum_probs=39.1
Q ss_pred cEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCc-cCcCchHHHHHHHhcCC
Q psy1766 78 RVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE-VNTHWLEPLLVPIAERT 131 (214)
Q Consensus 78 ~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 131 (214)
.+.++.. ..|...+...|++....++++++++|.. ++++.+..+++.+.+..
T Consensus 83 ~v~~~~~--~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 83 GAVFLEG--GATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp SCEEEEC--CSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred CcEEEeC--CCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 4555542 3467777788888877899999999975 58899999998875543
No 80
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=55.87 E-value=69 Score=24.77 Aligned_cols=79 Identities=10% Similarity=0.129 Sum_probs=46.1
Q ss_pred EEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCC-ccCcCchHHHHHHH
Q psy1766 49 EIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI-EVNTHWLEPLLVPI 127 (214)
Q Consensus 49 eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~-~~~~~~l~~l~~~~ 127 (214)
.+++|++... ......+.+..++. +..|.++.... ... ...+..+.|.|++.|... .+.++.++.+.+..
T Consensus 6 ~vLiV~g~~~--~~~a~~l~~aL~~~-g~~V~~i~~~~-~~~-----~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV 76 (259)
T 3rht_A 6 RVLYCGDTSL--ETAAGYLAGLMTSW-QWEFDYIPSHV-GLD-----VGELLAKQDLVILSDYPAERMTAQAIDQLVTMV 76 (259)
T ss_dssp CEEEEESSCT--TTTHHHHHHHHHHT-TCCCEEECTTS-CBC-----SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHH
T ss_pred eEEEECCCCc--hhHHHHHHHHHHhC-CceEEEecccc-ccc-----ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHH
Confidence 6777754433 34444444444433 35676666432 111 123456788888887654 46777778888877
Q ss_pred hcCCCEEEE
Q psy1766 128 AERTNTVTV 136 (214)
Q Consensus 128 ~~~~~~vv~ 136 (214)
+++...+++
T Consensus 77 ~~GGgLi~~ 85 (259)
T 3rht_A 77 KAGCGLVML 85 (259)
T ss_dssp HTTCEEEEE
T ss_pred HhCCeEEEe
Confidence 776666555
No 81
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=52.29 E-value=33 Score=27.90 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=46.5
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEE
Q psy1766 14 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYR 83 (214)
Q Consensus 14 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~ 83 (214)
.++.++|+-++|+++..+.++++++-..--....|..|+++|..-+ ++..+.+.++. ...+++..
T Consensus 26 r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFt-eeFk~~~~~~~----sg~v~Fg~ 90 (348)
T 1s4n_A 26 KPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFT-EEFKEAVTKAV----SSEVKFGI 90 (348)
T ss_dssp CCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCC-HHHHHHHHHHC----SSCEEEEE
T ss_pred CCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCC-HHHHHHHHHhc----CcceEEEE
Confidence 4689999999999989999999998765444444799999998764 34444455443 24666654
No 82
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=49.72 E-value=45 Score=22.70 Aligned_cols=71 Identities=14% Similarity=0.038 Sum_probs=41.0
Q ss_pred EEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhh----------hhcCCCEEEEEcCCCccCcC
Q psy1766 49 EIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGA----------KYATGKVLVFLDSHIEVNTH 118 (214)
Q Consensus 49 eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~----------~~a~gd~i~~lD~D~~~~~~ 118 (214)
-+|+..|.++ ..+...+..++..+ +.++.++ +.+.-.+.+ .|. +....-.+++.|....-+..
T Consensus 43 LViiA~D~~p--~~~~~~i~~lc~~~-~Ip~~~v--~sk~~LG~a--~G~~k~d~~g~~rk~v~~s~vaI~d~g~~~~~~ 115 (126)
T 2xzm_U 43 FVCVAEDCDQ--GNYVKLVKALCAKN-EIKYVSV--PKRASLGEY--LGHFTANAKGEIKKVKGCSSLAIRKYAPEITED 115 (126)
T ss_dssp EEEEESSCCS--TTHHHHHHHHHHHT-TCCEEEE--SCSHHHHHH--HTCCCBCTTCCBSCCCCCCEEEESSCCTTCCHH
T ss_pred EEEEeCCCCh--HHHHHHHHHHHHHh-CCCEEEE--CCHHHHHHH--HCCCccccccCcCceeeEEEEEEEecCcccCHH
Confidence 5666677766 68888999998886 3344443 334334443 333 22235567888776543443
Q ss_pred chHHHHHH
Q psy1766 119 WLEPLLVP 126 (214)
Q Consensus 119 ~l~~l~~~ 126 (214)
.+..+++.
T Consensus 116 ~~~~l~~~ 123 (126)
T 2xzm_U 116 EKKIIEGA 123 (126)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHHH
Confidence 55555443
No 83
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=36.81 E-value=43 Score=27.15 Aligned_cols=80 Identities=6% Similarity=0.003 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCC-CcchHHHHHhhhhhcCCCEEE
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSK-REGLIRARMFGAKYATGKVLV 107 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~-~~G~~~a~n~g~~~a~gd~i~ 107 (214)
..|..+|+.+.+.. - .+|+|+-+. . ..+.+.. . ...+.++..+. ..|.+.+...+.+ .+.++
T Consensus 32 pli~~~l~~l~~~~-~---~~i~vv~~~----~-i~~~~~~---~--~~~i~~~~~~~~~~g~~~~l~~~~~---~~~~l 94 (401)
T 2ggo_A 32 PLIEYQIEYLRKCG-I---RDITVIVSS----K-NKEYFEK---K--LKEISIVTQKDDIKGTGAAILSAKF---NDEAL 94 (401)
T ss_dssp EHHHHHHHHHHHTT-C---CEEEEEECG----G-GHHHHHH---H--CTTCEEEECCTTCCBSTTTGGGCCC---SSEEE
T ss_pred eHHHHHHHHHHHCC-C---CEEEEEeCH----H-HHHHhhc---c--CCcEEEEeCCCCCCChHHHHHHhcc---CCCEE
Confidence 67888888876653 2 377777532 2 2222322 1 12577777554 4566554444433 67888
Q ss_pred EEcCCCccC-cCchHHHHH
Q psy1766 108 FLDSHIEVN-THWLEPLLV 125 (214)
Q Consensus 108 ~lD~D~~~~-~~~l~~l~~ 125 (214)
++.+|..+. +..++.+++
T Consensus 95 v~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 95 IIYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp EEETTEEESCSHHHHHHTT
T ss_pred EEeCccccccHHHHHHHHH
Confidence 999998765 566666655
No 84
>3hgt_A HDA1 complex subunit 3; RECA-like domain, SWI2/SNF2 helical domain, chromatin regulator, coiled coil, nucleus, repressor, transcription; 2.20A {Saccharomyces cerevisiae} PDB: 3hgq_A
Probab=35.06 E-value=1.1e+02 Score=24.58 Aligned_cols=108 Identities=17% Similarity=0.187 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHH----------------
Q psy1766 29 ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIR---------------- 92 (214)
Q Consensus 29 ~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~---------------- 92 (214)
..|.+.|..+.++. ..|+|+-... .+.++++.+... .++.+.+.+.+.+...
T Consensus 112 ~~L~~LL~~l~~~~-----~kVLIfsq~t----~~LDilE~~l~~---~~~~y~RlDG~~~~~~~k~~~~~~~i~Lltsa 179 (328)
T 3hgt_A 112 SVLRDLINLVQEYE-----TETAIVCRPG----RTMDLLEALLLG---NKVHIKRYDGHSIKSAAAANDFSCTVHLFSSE 179 (328)
T ss_dssp HHHHHHHHHHTTSC-----EEEEEEECST----HHHHHHHHHHTT---SSCEEEESSSCCC-------CCSEEEEEEESS
T ss_pred HHHHHHHHHHHhCC-----CEEEEEECCh----hHHHHHHHHHhc---CCCceEeCCCCchhhhhhcccCCceEEEEECC
Confidence 44555555553321 3666666532 477777777764 2455554443322111
Q ss_pred ---HHHh-hhhhcCCCEEEEEcCCCccCcCchHHHHHHHhcC-CCEEEEeeeeeecCCcce
Q psy1766 93 ---ARMF-GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAER-TNTVTVPIIDIINADTFQ 148 (214)
Q Consensus 93 ---a~n~-g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~vv~~~~~~~~~~~~~ 148 (214)
+.|. +...+..|.|+.+|+|--+..+.++.+.++.... ...--+|++..+..++.+
T Consensus 180 g~~gin~~~~nl~~aD~VI~~DsdwNp~~d~iQa~~r~~R~~~gq~k~v~V~RLvt~~TiE 240 (328)
T 3hgt_A 180 GINFTKYPIKSKARFDMLICLDTTVDTSQKDIQYLLQYKRERKGLERYAPIVRLVAINSID 240 (328)
T ss_dssp CCCTTTSCCCCCSCCSEEEECSTTCCTTSHHHHHHHCCC---------CCEEEEEETTSHH
T ss_pred CCCCcCcccccCCCCCEEEEECCCCCCCChHHHHHHHHhhhccCCCCcceEEEEeCCCCHH
Confidence 1111 2235778999999999877777788776643221 112234555555555443
No 85
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=31.52 E-value=1.3e+02 Score=21.84 Aligned_cols=61 Identities=15% Similarity=-0.026 Sum_probs=34.3
Q ss_pred cEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCCc
Q psy1766 48 HEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE 114 (214)
Q Consensus 48 ~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~~ 114 (214)
-.||||||.-+. ..|...+.+...+.....|.+.. ......++.. +.... +++++--.+..
T Consensus 121 k~VllVDDvi~T-G~Tl~~a~~~L~~~ga~~V~v~~---~v~~~~~~~~-l~~~~-~~v~~~~~~~f 181 (208)
T 1wd5_A 121 RDVVLVDDGVAT-GASMEAALSVVFQEGPRRVVVAV---PVASPEAVER-LKARA-EVVALSVPQDF 181 (208)
T ss_dssp SEEEEECSCBSS-CHHHHHHHHHHHTTCCSEEEEEE---EEBCHHHHHH-HHTTS-EEEEEECCTTC
T ss_pred CEEEEECCCccH-HHHHHHHHHHHHHcCCCEEEEEE---EEcCHHHHHH-hcccC-cEEEEecCcch
Confidence 489999999774 56776666666554233454443 1122333332 22333 88877655543
No 86
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=30.00 E-value=1.8e+02 Score=26.25 Aligned_cols=77 Identities=13% Similarity=0.170 Sum_probs=46.4
Q ss_pred EEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhh
Q psy1766 19 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGA 98 (214)
Q Consensus 19 VIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~ 98 (214)
|||+-+-.. +.+...|..++.........+|||+++...+ .+....++.+ ..++.++..+ ..-...-..+++
T Consensus 6 IIVcG~~~~-~sV~~FL~Ef~h~d~~~~~~~VVIL~~~~P~-~ELe~lL~~~-----~~~V~fI~Gd-at~~edL~RA~I 77 (726)
T 3mt5_A 6 IVVCGHITL-ESVSNFLKDFLHKDRDDVNVEIVFLHNISPN-LELEALFKRH-----FTQVEFYQGS-VLNPHDLARVKI 77 (726)
T ss_dssp EEEEESCCH-HHHHHHHHHHHHHCTTTTTCEEEEECSSCCC-HHHHTTHHHH-----CSSEEEECCC-TTSHHHHHHTTG
T ss_pred EEEECCCcH-HHHHHHHHHHHhccccccCCcEEEEeCCCCC-HHHHHHHHhh-----cCceEEEEeC-CCCHHHHHhcCh
Confidence 567676655 8888888888877665444588888876541 1233333332 3578888744 333444455666
Q ss_pred hhcCC
Q psy1766 99 KYATG 103 (214)
Q Consensus 99 ~~a~g 103 (214)
+.|++
T Consensus 78 ~~A~a 82 (726)
T 3mt5_A 78 ESADA 82 (726)
T ss_dssp GGCSE
T ss_pred hhcCE
Confidence 66653
No 87
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=26.22 E-value=2.1e+02 Score=22.72 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=48.7
Q ss_pred EEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhh-
Q psy1766 21 ICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAK- 99 (214)
Q Consensus 21 Ip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~- 99 (214)
+|..++. ..|..+++.+...... .+|+||-+... ...+.+ ......+ ++. +...|.+.+.-.+..
T Consensus 29 l~l~G~~-pli~~~l~~l~~~~~~---~~iiVvt~~~~-----~~~i~~---~l~~~~~-i~e-~~~~gta~ai~~a~~l 94 (337)
T 2cu2_A 29 LPLFEGK-TLLEATLERLAPLVPP---ERTLLAVRRDQ-----EAVARP---YADGIRL-LLE-PLGRDTAGAVLLGVAE 94 (337)
T ss_dssp CBCGGGC-BHHHHHHHHHTTTSCG---GGEEEEEEGGG-----HHHHGG---GCSSSEE-EEE-SSCCHHHHHHHHHHHH
T ss_pred EEcCCCC-hHHHHHHHHHhCcCCC---CCEEEEcChHH-----HHHHHH---HhccCce-Eec-CCCCCcHHHHHHHHHH
Confidence 3444434 6777888887654222 26666654321 122222 2211122 333 445566665555544
Q ss_pred -hc-CCCEEEEEcCCCccC-cCchHHHHHH
Q psy1766 100 -YA-TGKVLVFLDSHIEVN-THWLEPLLVP 126 (214)
Q Consensus 100 -~a-~gd~i~~lD~D~~~~-~~~l~~l~~~ 126 (214)
.. ..+.++++.+|..+. ++.+..+++.
T Consensus 95 ~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~ 124 (337)
T 2cu2_A 95 ALKEGAERLLVLPADHYVGDDEAYREALAT 124 (337)
T ss_dssp HHHHTCSEEEEEESSCEESCHHHHHHHHHH
T ss_pred hccCCCCEEEEEECCccCCCHHHHHHHHHH
Confidence 21 357899999998864 4556555554
No 88
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=25.61 E-value=89 Score=24.48 Aligned_cols=78 Identities=12% Similarity=0.087 Sum_probs=37.3
Q ss_pred CCccccCCcCC--CCCCceEEEEEEeCCCchH----HHHHHHHHHhcCC--CCCccEEEEEECCCCCCCChHHHHHHHHh
Q psy1766 1 MSIICANQTFP--STLPSTSVIICFYNEHPAT----LYRSVQTLLSRTG--QSLLHEIILVNDFSEYPSNLHGEVETFVK 72 (214)
Q Consensus 1 ~~~~~~~~~~~--~~~p~vSVIIp~~n~~~~~----l~~~l~sl~~q~~--~~~~~eiivVdd~s~~~d~t~~~~~~~~~ 72 (214)
|.+.|...+-+ ..-.+|.++.|.=... .. +.+.++..+++.- ....+++++.|++++. +...+.++++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~iG~~~plsG~~-a~~g~~~~~g~~~a~~~in~i~G~~i~l~~~D~~~~~-~~~~~~~~~l~~ 78 (366)
T 3td9_A 1 MGSDKIHHHHHHMRKVVKIAVILPMTGGI-SAFGRMVWEGIQIAHEEKPTVLGEEVELVLLDTRSEK-TEAANAAARAID 78 (366)
T ss_dssp ---------------CEEEEEEECCSSTT-HHHHHHHHHHHHHHHHHCCEETTEEEEEEEEECTTCH-HHHHHHHHHHHH
T ss_pred CCccccchhhhhhcceEEEEEEECCcCcc-hhcCHHHHHHHHHHHHHhhhcCCeEEEEEEecCCCCH-HHHHHHHHHHhc
Confidence 44455533322 2334788899987665 32 2333333333221 1223799999998763 445667777776
Q ss_pred hcCCCcEEEEE
Q psy1766 73 GLNNGRVHLYR 83 (214)
Q Consensus 73 ~~~~~~v~~i~ 83 (214)
+ .++..+-
T Consensus 79 ~---~~v~~ii 86 (366)
T 3td9_A 79 K---EKVLAII 86 (366)
T ss_dssp T---SCCSEEE
T ss_pred c---CCeEEEE
Confidence 5 2454544
No 89
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=25.28 E-value=1.2e+02 Score=23.53 Aligned_cols=86 Identities=17% Similarity=0.160 Sum_probs=49.3
Q ss_pred HHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEc
Q psy1766 31 LYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLD 110 (214)
Q Consensus 31 l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD 110 (214)
+..++..|.+... --|||..|.+. ......+..++.++ +|-++......-.|.+ .|.. ..-.++++|
T Consensus 136 ~keV~KaIekgKA----kLVVIA~DadP--~eivk~LpaLC~k~---gVPy~~V~sK~eLG~A--~Gkk--~~s~VAItD 202 (256)
T 3izc_H 136 LNHVVALIENKKA----KLVLIANDVDP--IELVVFLPALCKKM---GVPYAIVKGKARLGTL--VNQK--TSAVAALTE 202 (256)
T ss_dssp HHHHHHHHHHTCC----SEEEEESCCSS--GGGTTHHHHHHHHH---TCCEEEESCHHHHHHH--TTCS--SCCSEEEES
T ss_pred HHHHHHHHHhCcc----eEEEEeCCCCh--HHHHHHHHHHHHhc---CCCEEEECCHHHHHHH--hCCC--CcEEEEeec
Confidence 3455555544332 26666777765 45666677777776 4444433333333332 2333 456788998
Q ss_pred CCCccCcCchHHHHHHHhcC
Q psy1766 111 SHIEVNTHWLEPLLVPIAER 130 (214)
Q Consensus 111 ~D~~~~~~~l~~l~~~~~~~ 130 (214)
....- .+.+..+++.+..+
T Consensus 203 ~g~eD-k~al~kLve~iktn 221 (256)
T 3izc_H 203 VRAED-EAALAKLVSTIDAN 221 (256)
T ss_dssp SCCSC-CHHHHHHHHHHHHH
T ss_pred CChhh-HHHHHHHHHHHHhh
Confidence 87533 36688888888653
No 90
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.47 E-value=2.2e+02 Score=21.09 Aligned_cols=98 Identities=8% Similarity=0.008 Sum_probs=52.8
Q ss_pred CCCceEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcC-CCcc-h
Q psy1766 13 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTS-KREG-L 90 (214)
Q Consensus 13 ~~p~vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~-~~~G-~ 90 (214)
+|.+.-|.|-+-... ..+...++.+.+...+ .||+.|--...+ .... +.+.++ ++-++..+ +++. .
T Consensus 4 ~m~~~ri~vl~SG~g-snl~all~~~~~~~l~---~~I~~Visn~~~-a~~l----~~A~~~---gIp~~~~~~~~~~~r 71 (209)
T 4ds3_A 4 SMKRNRVVIFISGGG-SNMEALIRAAQAPGFP---AEIVAVFSDKAE-AGGL----AKAEAA---GIATQVFKRKDFASK 71 (209)
T ss_dssp --CCEEEEEEESSCC-HHHHHHHHHHTSTTCS---EEEEEEEESCTT-CTHH----HHHHHT---TCCEEECCGGGSSSH
T ss_pred cCCCccEEEEEECCc-HHHHHHHHHHHcCCCC---cEEEEEEECCcc-cHHH----HHHHHc---CCCEEEeCccccCCH
Confidence 466677778787888 8888888877554332 477655443331 2222 334443 44444322 1221 1
Q ss_pred ---HHHHHhhhhhcCCCEEEEEcCCCccCcCchHH
Q psy1766 91 ---IRARMFGAKYATGKVLVFLDSHIEVNTHWLEP 122 (214)
Q Consensus 91 ---~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~ 122 (214)
-.+.-..++..+-|+++..-=--.+++.+++.
T Consensus 72 ~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~ 106 (209)
T 4ds3_A 72 EAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAP 106 (209)
T ss_dssp HHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhh
Confidence 13344455666788887776555566665544
No 91
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=23.98 E-value=2.7e+02 Score=25.38 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=44.9
Q ss_pred eEEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHh
Q psy1766 17 TSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMF 96 (214)
Q Consensus 17 vSVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~ 96 (214)
==|||+-+... +.+...|..++.+.......+|||+++...+ .+....++ .+ ..++.++..+. .-...-..+
T Consensus 54 ~HIIIcG~~~~-~~v~~fL~El~~~~~~~~~~~IVIL~~~~p~-~eLe~lL~----~~-~~~V~fI~Gda-t~~e~L~RA 125 (798)
T 3naf_A 54 KHIVVCGHITL-ESVSNFLKDFLHKDRDDVNVEIVFLHNISPN-LELEALFK----RH-FTQVEFYQGSV-LNPHDLARV 125 (798)
T ss_dssp EEEEEESCCCH-HHHHHHHHHHTCTTSCCCCEEEEEEESSCCC-HHHHHHHH----HT-TTTEEEEECCS-SSHHHHHHT
T ss_pred CeEEEEcCCCH-HHHHHHHHHHHhhcccccCCcEEEEeCCCCc-HHHHHHhh----cc-cCceEEEEcCC-CCHHHHHhc
Confidence 34566665544 7777788888776654323588888875431 22233333 22 35788888542 334444556
Q ss_pred hhhhcC
Q psy1766 97 GAKYAT 102 (214)
Q Consensus 97 g~~~a~ 102 (214)
+++.|+
T Consensus 126 gI~~A~ 131 (798)
T 3naf_A 126 KIESAD 131 (798)
T ss_dssp TGGGCS
T ss_pred CHhhCC
Confidence 666665
No 92
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=23.97 E-value=2.4e+02 Score=21.95 Aligned_cols=86 Identities=12% Similarity=0.117 Sum_probs=48.3
Q ss_pred HHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEc
Q psy1766 31 LYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLD 110 (214)
Q Consensus 31 l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD 110 (214)
+.+++.+|..... .-|||..|.+. ......+..++..+ +|-++....+.-.+.+ .|.. +.-.|+++|
T Consensus 140 ~keV~KaIekgkA----kLVIIA~DasP--~ei~~~Lp~LC~~~---~VPyi~v~sk~eLG~A--~Gkk--~~s~VAItD 206 (266)
T 2zkr_f 140 VNTVTTLVENKKA----QLVVIAHDVDP--IELVVFLPALCRKM---GVPYCIIKGKARLGHL--VHRK--TCTTVAFTQ 206 (266)
T ss_dssp HHHHHHHHHTTCC----SEEEEESCCSS--STTTTHHHHHHHHH---TCCEEEESCHHHHHHH--HTSS--CCSEEEETT
T ss_pred hHHHHHHHHhCCc----eEEEEecCCCH--HHHHHHHHHHHHhc---CCCEEEECCHHHHHHH--hCCC--CceEEEEee
Confidence 3455555543322 26666677766 46666777777775 4444433333333333 3333 556778887
Q ss_pred CCCccCcCchHHHHHHHhcC
Q psy1766 111 SHIEVNTHWLEPLLVPIAER 130 (214)
Q Consensus 111 ~D~~~~~~~l~~l~~~~~~~ 130 (214)
... -+...+..+++.+..+
T Consensus 207 ~G~-eD~~al~klve~ik~~ 225 (266)
T 2zkr_f 207 VNS-EDKGALAKLVEAIRTN 225 (266)
T ss_dssp CSS-TTTTHHHHHHHHHC--
T ss_pred cCc-chHHHHHHHHHHHHHh
Confidence 754 2356788888888543
No 93
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=23.18 E-value=33 Score=26.76 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=27.0
Q ss_pred cCCCEEEEEcCCCccCcCchHHHHHHHhcCCCEEEE
Q psy1766 101 ATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTV 136 (214)
Q Consensus 101 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~vv~ 136 (214)
...+|+++.|+|+.+..+-|.+++..+......-++
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG 127 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVG 127 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEE
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEE
Confidence 478999999999999887787777766544444433
No 94
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=22.78 E-value=1.6e+02 Score=20.47 Aligned_cols=8 Identities=0% Similarity=0.160 Sum_probs=4.1
Q ss_pred CCEEEEEc
Q psy1766 103 GKVLVFLD 110 (214)
Q Consensus 103 gd~i~~lD 110 (214)
.|.++++.
T Consensus 93 aD~vi~~~ 100 (163)
T 3mvn_A 93 ADSVFIYQ 100 (163)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEEC
Confidence 45555554
No 95
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=22.01 E-value=1.8e+02 Score=19.40 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=30.7
Q ss_pred EEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEcCCCcchHHHHHhhhhhcCCCEEEEEcCCC
Q psy1766 49 EIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 113 (214)
Q Consensus 49 eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~~~~~G~~~a~n~g~~~a~gd~i~~lD~D~ 113 (214)
-||+..|.+. ......+..++..+ +|-++....+.-.+.+ .|.. .+.-.+.++|.++
T Consensus 50 lViiA~D~~p--~~~~~~l~~lc~~~---~VP~~~v~sk~eLG~a--~Gk~-~~vs~vaI~d~~~ 106 (122)
T 3o85_A 50 LVIIAADADP--IEIVLHLPLACEDK---GVPYVFIGSKNALGRA--CNVS-VPTIVASIGKHDA 106 (122)
T ss_dssp EEEEETTCSS--GGGGTTHHHHHHTT---TCCEEEESCHHHHHHH--TTCS-SCCSEEEECCCTT
T ss_pred EEEEeCCCCh--HHHHHHHHHHHHHh---CCCEEEECCHHHHHHH--hCCC-CCEEEEEEEcccc
Confidence 5666677765 34456777777765 4444443332222222 1221 1235678889887
No 96
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=21.94 E-value=1.4e+02 Score=20.39 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=40.4
Q ss_pred EEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEECCCCCCCChHHHHHHHHhhcCCCcEEEEEc----CCCcchHHH
Q psy1766 18 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNNGRVHLYRT----SKREGLIRA 93 (214)
Q Consensus 18 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVdd~s~~~d~t~~~~~~~~~~~~~~~v~~i~~----~~~~G~~~a 93 (214)
.+..+.-+.....+.++|..++.+...+ ++|..|+|+. -+....+++...+ +|+.... +...|....
T Consensus 41 i~~~~~~~~~~~~v~~~l~~~~~~~g~p---~~i~sDnG~~---f~s~~~~~~~~~~---gi~~~~~~p~~p~~ng~~Er 111 (162)
T 1cxq_A 41 IVVTQHGRVTSVAAQHHWATAIAVLGRP---KAIKTDNGSC---FTSKSTREWLARW---GIAHTTGIPGNSQGQAMVER 111 (162)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHHHCCC---SEEECCSCHH---HHSHHHHHHHHHH---TCEEECCCCC----CHHHHH
T ss_pred EEEEECCCccHHHHHHHHHHHHHHHCCC---eEEEeCCchh---hhhHHHHHHHHHC---CCeEeeCCCCCCccCCEEeh
Confidence 3344444444355566777766655444 6889999984 4445566666654 4555432 223456666
Q ss_pred HHhhhh
Q psy1766 94 RMFGAK 99 (214)
Q Consensus 94 ~n~g~~ 99 (214)
.|.-++
T Consensus 112 ~~~tlk 117 (162)
T 1cxq_A 112 ANRLLK 117 (162)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 97
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=20.53 E-value=1.2e+02 Score=24.62 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=21.5
Q ss_pred EEEEEEeCCCchHHHHHHHHHHhcCCCCCccEEEEEE
Q psy1766 18 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVN 54 (214)
Q Consensus 18 SVIIp~~n~~~~~l~~~l~sl~~q~~~~~~~eiivVd 54 (214)
.||+|.|+.. . -+....++++.+|. .|||-||
T Consensus 295 ~VivP~fgd~-~--D~~A~~~L~~~fP~--r~Vi~v~ 326 (355)
T 1xkn_A 295 VVLVPTYRCP-R--DQQAIDILQQCFPK--REVVGID 326 (355)
T ss_dssp EEEEEECSST-H--HHHHHHHHHHHCTT--SEEEEEE
T ss_pred EEEEeeCCCc-c--cHHHHHHHHHHCCC--CEEEEee
Confidence 5788999876 3 33344455666676 5888887
No 98
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=20.27 E-value=2.2e+02 Score=19.57 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=21.4
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHhc
Q psy1766 14 LPSTSVIICFYNEHPATLYRSVQTLLSR 41 (214)
Q Consensus 14 ~p~vSVIIp~~n~~~~~l~~~l~sl~~q 41 (214)
|.++.|||.+|..-.+.+.++++-++..
T Consensus 1 M~~igiii~sHG~~A~gl~~~~~~i~G~ 28 (144)
T 3lfh_A 1 MKEKFVLIITHGDFGKGLLSGAEVIIGK 28 (144)
T ss_dssp CCCEEEEEEEETTHHHHHHHHHHHHHCC
T ss_pred CCcceEEEEeCcHHHHHHHHHHHHHcCC
Confidence 5569999999987557777777777644
Done!