BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17681
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5E936|TXD12_BOVIN Thioredoxin domain-containing protein 12 OS=Bos taurus GN=TXNDC12
PE=2 SV=1
Length = 172
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 1 MFYRNVLAAVCVL------CVVSCQG--DLSRGFGGHINWKSLDAGLQAAKTSGKPLMVL 52
M R L A C+L V S G L +GFG HI+W++L+ G + A SG PLMV+
Sbjct: 1 MELRPRLGATCLLGFSFLLLVTSSHGPNGLGKGFGDHIHWRTLEDGKKEAAASGLPLMVI 60
Query: 53 IHKSYCAACHELSPKFAASPEIAELAPKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGP 112
IHKS+C AC L PKFA S EI+EL+ F MVN+ D+EEP+D ++PDG Y+PRIL+ P
Sbjct: 61 IHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDP 120
Query: 113 QGEPKSQVFNAKSPQVYRHYYYDVPSIVQAMKSA 146
G+ + ++ N Y+++Y +VQ MK A
Sbjct: 121 SGKVRPEIINENGNPSYKYFYISAEQVVQGMKEA 154
>sp|O95881|TXD12_HUMAN Thioredoxin domain-containing protein 12 OS=Homo sapiens GN=TXNDC12
PE=1 SV=1
Length = 172
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 1 MFYRNVLAAVCVL------CVVSCQG--DLSRGFGGHINWKSLDAGLQAAKTSGKPLMVL 52
M R L A C+L V+S G L +GFG HI+W++L+ G + A SG PLMV+
Sbjct: 1 METRPRLGATCLLGFSFLLLVISSDGHNGLGKGFGDHIHWRTLEDGKKEAAASGLPLMVI 60
Query: 53 IHKSYCAACHELSPKFAASPEIAELAPKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGP 112
IHKS+C AC L PKFA S EI+EL+ F MVN+ D+EEP+D ++PDG Y+PRIL+ P
Sbjct: 61 IHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDP 120
Query: 113 QGEPKSQVFNAKSPQVYRHYYYDVPSIVQAMKSA 146
G+ ++ N Y+++Y +VQ MK A
Sbjct: 121 SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEA 154
>sp|Q498E0|TXD12_RAT Thioredoxin domain-containing protein 12 OS=Rattus norvegicus
GN=Txndc12 PE=2 SV=2
Length = 170
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 85/125 (68%)
Query: 22 LSRGFGGHINWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKF 81
L +GFG HI+W++L+ G + A SG PLMV+IHKS+C AC L PKFA S EI+EL+ F
Sbjct: 28 LGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNF 87
Query: 82 EMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSIVQ 141
MVN+ D+EEP+D ++PDG Y+PRIL+ P G+ + ++ N Y+++Y +VQ
Sbjct: 88 VMVNLEDEEEPRDEDFSPDGGYIPRILFLDPSGKVRPEIINESGNPSYKYFYVSAEQVVQ 147
Query: 142 AMKSA 146
MK A
Sbjct: 148 GMKEA 152
>sp|Q9CQU0|TXD12_MOUSE Thioredoxin domain-containing protein 12 OS=Mus musculus GN=Txndc12
PE=2 SV=1
Length = 170
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 85/125 (68%)
Query: 22 LSRGFGGHINWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKF 81
L +GFG HI+W++L+ G + A SG PLMV+IHKS+C AC L PKFA S EI+EL+ F
Sbjct: 28 LGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNF 87
Query: 82 EMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSIVQ 141
MVN+ D+EEP+D ++PDG Y+PRIL+ P G+ + ++ N Y+++Y +VQ
Sbjct: 88 VMVNLEDEEEPRDEDFSPDGGYIPRILFLDPSGKVRPEIINESGNPSYKYFYVSAEQVVQ 147
Query: 142 AMKSA 146
MK A
Sbjct: 148 GMKEA 152
>sp|Q8R3W7|AGR3_MOUSE Anterior gradient protein 3 homolog OS=Mus musculus GN=Agr3 PE=2
SV=1
Length = 165
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G I W ++ + GL A+ S KPLMV+ H C C L +FA + EI E+A
Sbjct: 33 LSRGWGDDITWVQTYEEGLFHARKSNKPLMVIHHLEDCQYCQALKKEFAKNEEIQEMAQN 92
Query: 81 -FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
F M+N+ E D +PDG YVPRI++ P ++ + S ++Y + D+P +
Sbjct: 93 DFIMLNLM--HETTDKNLSPDGQYVPRIMFVDPSLTVRADITGRYSNRLYTYEPQDLPML 150
Query: 140 VQAMKSAL 147
V MK AL
Sbjct: 151 VDNMKKAL 158
>sp|Q8TD06|AGR3_HUMAN Anterior gradient protein 3 homolog OS=Homo sapiens GN=AGR3 PE=1
SV=1
Length = 166
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAP- 79
LSRG+G I W ++ + GL A+ S KPLMV+ H C L FA + EI E+A
Sbjct: 34 LSRGWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN 93
Query: 80 KFEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
KF M+N+ E D +PDG YVPRI++ P ++ + S ++Y + D+P +
Sbjct: 94 KFIMLNLM--HETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLL 151
Query: 140 VQAMKSAL 147
++ MK AL
Sbjct: 152 IENMKKAL 159
>sp|Q6DJ58|AGR3_XENTR Anterior gradient protein 3 OS=Xenopus tropicalis GN=agr3 PE=2 SV=2
Length = 164
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 9 AVCVLCVVSCQGDLSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPK 67
A+ V + LSRG+G I+W ++ + GL AK KPLMV+ H C C L
Sbjct: 19 AMSVRKEIRAPQTLSRGWGDDISWVQTYEEGLYNAKKRNKPLMVIHHLEDCQYCQALKKV 78
Query: 68 FAASPEIAELA-PKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSP 126
FA S E LA +F M+N+ E D +PDG YVPRI++ P ++ + S
Sbjct: 79 FAESDEAQTLAQEQFIMLNLM--HETTDKNLSPDGQYVPRIMFIDPTLTVRADITGRYSN 136
Query: 127 QVYRHYYYDVPSIVQAMKSALN 148
+ Y + D+P +++ M A++
Sbjct: 137 RRYTYEPQDLPLLIENMNKAIH 158
>sp|Q5R7P1|AGR2_PONAB Anterior gradient protein 2 homolog OS=Pongo abelii GN=AGR2 PE=2
SV=1
Length = 175
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G + W ++ + L +KTS KPLM++ H C L FA + EI +LA +
Sbjct: 44 LSRGWGDQLIWTQTYEEALYKSKTSNKPLMIIHHLDECPHSQALKKVFAENKEIQKLAEQ 103
Query: 81 FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSIV 140
F ++N+ E D +PDG YVPRI++ P ++ + S ++Y + D ++
Sbjct: 104 FVLLNLV--YETTDKHLSPDGQYVPRIMFVDPSLTVRADITGRYSNRLYAYEPTDTALLL 161
Query: 141 QAMKSALN 148
MK AL
Sbjct: 162 DNMKKALK 169
>sp|O95994|AGR2_HUMAN Anterior gradient protein 2 homolog OS=Homo sapiens GN=AGR2 PE=1
SV=1
Length = 175
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G + W ++ + L +KTS KPLM++ H C L FA + EI +LA +
Sbjct: 44 LSRGWGDQLIWTQTYEEALYKSKTSNKPLMIIHHLDECPHSQALKKVFAENKEIQKLAEQ 103
Query: 81 FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSIV 140
F ++N+ E D +PDG YVPRI++ P ++ + S ++Y + D ++
Sbjct: 104 FVLLNLV--YETTDKHLSPDGQYVPRIMFVDPSLTVRADITGRYSNRLYAYEPADTALLL 161
Query: 141 QAMKSALN 148
MK AL
Sbjct: 162 DNMKKALK 169
>sp|O88312|AGR2_MOUSE Anterior gradient protein 2 homolog OS=Mus musculus GN=Agr2 PE=2
SV=1
Length = 175
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G + W ++ + L +KTS +PLMV+ H C L FA EI +LA +
Sbjct: 44 LSRGWGDQLIWTQTYEEALYRSKTSNRPLMVIHHLDECPHSQALKKVFAEHKEIQKLAEQ 103
Query: 81 FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSIV 140
F ++N+ E D +PDG YVPRI++ P ++ + S ++Y + D +
Sbjct: 104 FVLLNLV--YETTDKHLSPDGQYVPRIVFVDPSLTVRADITGRYSNRLYAYEPSDTALLY 161
Query: 141 QAMKSALN 148
MK AL
Sbjct: 162 DNMKKALK 169
>sp|Q7ZZH4|AGR2B_XENLA Anterior gradient protein 2-B OS=Xenopus laevis GN=agr2-b PE=2 SV=1
Length = 164
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 16 VSCQGDLSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEI 74
VS LSRG+G ++ W ++ + GL AK KPLM++ H++ C L FA I
Sbjct: 27 VSKPQTLSRGWGDNLEWVQTYEEGLYKAKAENKPLMLINHRNDCPHSLALKKAFAEHQGI 86
Query: 75 AELAPKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYY 134
+LA +F ++N+ D P D DG YVP+I++ P S V A P Y ++ Y
Sbjct: 87 QKLAEEFILLNVVYD--PTDKNLQLDGQYVPKIIFVDP-----SLVVRADLPGKYSNHQY 139
Query: 135 -----DVPSIVQAMKSAL 147
D+ + + MK AL
Sbjct: 140 TYEPADIDHLFENMKKAL 157
>sp|Q28ID5|AGR2_XENTR Anterior gradient protein 2 OS=Xenopus tropicalis GN=agr2 PE=2 SV=1
Length = 164
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G ++ W ++ + GL AKT KPL+++ H++ C L FA I +LA +
Sbjct: 33 LSRGWGDNLEWVQTYEEGLYKAKTENKPLILINHRNDCPHSLALKKAFAEHQGIQKLAEE 92
Query: 81 FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYY-----D 135
F ++N+ D P D DG YVP++++ P S V A P Y ++ Y D
Sbjct: 93 FVLLNVVYD--PTDKNLQLDGQYVPKVVFVDP-----SLVVRADLPGKYSNHQYTYEPAD 145
Query: 136 VPSIVQAMKSAL 147
+ + + MK AL
Sbjct: 146 IDLLFENMKKAL 157
>sp|Q90Y05|AGR2A_XENLA Anterior gradient protein 2-A OS=Xenopus laevis GN=agr2-a PE=2 SV=1
Length = 159
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G ++ W ++ + GL AK+ KPL+++ H++ C L FA I +LA +
Sbjct: 28 LSRGWGDNLEWVQTYEEGLFKAKSENKPLLLINHRNDCPHSQALKKAFAEHQGIQKLAEE 87
Query: 81 FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYY-----D 135
F ++N+ D P D DG YVP++++ P S V A P Y ++ Y D
Sbjct: 88 FILLNVVYD--PTDKNLQLDGQYVPKVVFVDP-----SLVVRADLPGKYSNHQYTYEPAD 140
Query: 136 VPSIVQAMKSAL 147
+ + + MK AL
Sbjct: 141 IDHLFENMKKAL 152
>sp|Q5RZ65|AGR2_DANRE Anterior gradient protein 2 homolog OS=Danio rerio GN=agr2 PE=2
SV=1
Length = 171
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
LSRG+G + W ++ + L +++ KPLMV+ H C L FA EI +LA +
Sbjct: 39 LSRGWGDQLIWAQTYEEALFWSRSKNKPLMVIFHLEDCPHSQALKKAFAEDKEIQKLADE 98
Query: 81 -FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
F ++N+ E D +PDG YVPRI++ P ++ + S ++Y + D+ +
Sbjct: 99 DFVILNLV--YETTDKHLSPDGQYVPRIIFVDPSMTVRADITGRYSNRMYAYEPADMKLL 156
Query: 140 VQAMKSALN 148
+ M+ AL
Sbjct: 157 LSNMQRALK 165
>sp|Q6NVS9|AG1_XENTR Anterior gradient protein 1 OS=Xenopus tropicalis GN=ag1 PE=2 SV=1
Length = 187
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
L RG+G I W ++ + GL A+ + KPLMV+ H C L F A +LA +
Sbjct: 55 LDRGWGEEIEWVQTYEEGLAKARENNKPLMVIHHLEDCPYSIALKKAFVADRLAQKLARE 114
Query: 81 -FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
F M+N+ D APDG YVPR+++ P +S + ++Y + D+P +
Sbjct: 115 DFIMLNLV--HPVADENQAPDGHYVPRVIFVDPSLTVRSDLKGRYGNKMYAYDADDIPEL 172
Query: 140 VQAMKSA 146
V MK A
Sbjct: 173 VTNMKKA 179
>sp|P55869|AG2_XENLA Anterior gradient protein 2 OS=Xenopus laevis GN=ag2 PE=2 SV=3
Length = 185
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
L RG+G I W ++ + GL A+ + KPLMV+ H C L F A +LA +
Sbjct: 53 LDRGWGEDIEWAQTYEEGLAKARENNKPLMVIHHLEDCPYSIALKKAFVADKMAQKLAQE 112
Query: 81 -FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
F M+N+ D +PDG YVPR+++ P +S + ++Y + D+P +
Sbjct: 113 DFIMLNLV--HPVADENQSPDGHYVPRVIFIDPSLTVRSDLKGRYGNKLYAYDADDIPEL 170
Query: 140 VQAMKSA 146
+ MK A
Sbjct: 171 ITNMKKA 177
>sp|P55868|AG1_XENLA Anterior gradient protein 1 OS=Xenopus laevis GN=ag1 PE=1 SV=1
Length = 183
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 22 LSRGFGGHINW-KSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPK 80
L RG+G I W ++ + GL A+ + KPLMV+ H C L F A +LA +
Sbjct: 51 LDRGWGESIEWVQTYEEGLAKARENNKPLMVIHHLEDCPYSIALKKAFVADRMAQKLAQE 110
Query: 81 -FEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYDVPSI 139
F M+N+ D +PDG YVPR+++ P +S + ++Y + D+P +
Sbjct: 111 DFIMLNLV--HPVADENQSPDGHYVPRVIFIDPSLTVRSDLKGRYGNKMYAYDADDIPEL 168
Query: 140 VQAMKSA 146
+ MK A
Sbjct: 169 ITNMKKA 175
>sp|P35088|TXLA_SYNE7 Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus
(strain PCC 7942) GN=txlA PE=3 SV=1
Length = 191
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 40 QAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNISDDEE-PQDPKYA 98
+ A + +P+++ + +C +C ++ + AA + F M+NI +D+ P+ Y
Sbjct: 51 EVAIANDRPMLLEFYADWCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYN 110
Query: 99 PDGDYVPRILYFGPQGEPK 117
DG +P+ +Y QG+P+
Sbjct: 111 VDG--IPQFVYLNGQGQPQ 127
>sp|P73920|TXLA_SYNY3 Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=txlA PE=3 SV=1
Length = 180
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 4 RNVLAAVCVLCVVSCQGDLSRGFGGHINWKSLDAGLQ------AAKTSGKPLMVLIHKSY 57
RN L AV + + + + GF SL+A Q A +G+P +V + +
Sbjct: 7 RNALLAVVAIALSAA---VYLGFQTQTQGISLEAQAQRAIPLATALDNGRPTLVEFYADW 63
Query: 58 CAACHELSPKFAASPEIAELAPKFEMVNISDDEE-PQDPKYAPDGDYVPRILYFGPQG 114
C +C ++P A + + F M+N+ +++ P+ +Y DG +P +Y G
Sbjct: 64 CTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVDG--IPHFVYLDDTG 119
>sp|O23166|TR164_ARATH Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis
thaliana GN=HCF164 PE=2 SV=2
Length = 261
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 7 LAAVCVLCVVSCQGDLSRGFGGHINWKSLDAGL---QAAKTSGKPLMVLIHKSYCAACHE 63
+AAV V+ +S FG I+ K L A + A ++GKP +V + +C C E
Sbjct: 98 VAAVTVIAALSLFVSTRLDFG--ISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRE 155
Query: 64 LSPKFAASPEIAELAPKFEMVNISDDEEPQD-PKYAPDGDYVPRILYFGPQGEPKSQV 120
L+P + + F M+N+ + + Q+ ++ +G +P + +G + V
Sbjct: 156 LAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEG--IPHFAFLDREGNEEGNV 211
>sp|A6TH46|DSBD_KLEP7 Thiol:disulfide interchange protein DsbD OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=dsbD PE=3 SV=1
Length = 598
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 35 LDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNIS-DDEEPQ 93
LD L AK G+P+M+ ++ +C AC E +SP++ + ++ + PQ
Sbjct: 492 LDQALAQAK--GQPVMLDLYADWCVACKEFEKYTFSSPDVQQALKGTVLLQVDVTKNSPQ 549
Query: 94 DPKYAPDGDY--VPRILYFGPQGEPKSQ 119
D +P IL+F +G+ +S+
Sbjct: 550 DVALLKHLQVLGLPTILFFNAEGQEQSE 577
>sp|Q9HUW5|DSBD1_PSEAE Thiol:disulfide interchange protein DsbD 1 OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=dsbD1 PE=3 SV=1
Length = 591
Score = 36.2 bits (82), Expect = 0.072, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 35 LDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMV--NISDDEEP 92
LDA L A+ +GKP+++ + +C +C + + P + P + ++ +I++
Sbjct: 481 LDAALAEARQAGKPVLLDWYADWCISCKVIERQVLTDPTVQARLPAYRLLRFDITESNPA 540
Query: 93 QD---PKYAPDGDYVPRILYFGPQGEPKSQV 120
Q +Y G P IL+F P G+ S +
Sbjct: 541 QRGLLDRYNLFGP--PAILFFAPGGDEWSDL 569
>sp|A8AMR4|DSBD_CITK8 Thiol:disulfide interchange protein DsbD OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=dsbD
PE=3 SV=1
Length = 569
Score = 34.7 bits (78), Expect = 0.22, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 28 GHINWK---SLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE 76
H+N+K ++DA QA A+ GKP+M+ ++ +C AC E + P++ +
Sbjct: 450 AHLNFKPITTVDALNQALAEAKGKPIMLDLYADWCVACKEFEKYTFSDPQVQQ 502
>sp|Q9KNN1|DSBD_VIBCH Thiol:disulfide interchange protein DsbD OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=dsbD PE=3 SV=1
Length = 600
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 31 NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNIS-DD 89
N L + L AK GK +M+ + +C AC E + ++ F ++
Sbjct: 488 NLSELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFHAKQVENKLSGFVLLQADVTK 547
Query: 90 EEPQDPKY--APDGDYVPRILYFGPQGEP 116
+PQD + A + +P I ++ QGEP
Sbjct: 548 NQPQDIELLKALNVLGLPTIEFWNAQGEP 576
>sp|Q7Y0D4|TR164_ORYSJ Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa
subsp. japonica GN=Os03g0767500 PE=2 SV=1
Length = 262
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 26 FGGHINWKSLDAGL---QAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFE 82
FGG ++ K L A + A ++GKP +V + +C C EL+P + + F
Sbjct: 117 FGG-VSLKDLAANATPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFV 175
Query: 83 MVNISDDEEPQD-PKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYRHYYYD 135
M+N+ + + Q+ ++ +G +P + +G + V ++ + Y+ D
Sbjct: 176 MLNVDNTKWEQELDEFGVEG--IPHFAFLDKEGNEEGNVVG----RLPKQYFLD 223
>sp|O77404|TYPX_TRYBB Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1
Length = 144
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 30/73 (41%)
Query: 22 LSRGFGGHINWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKF 81
L++ G N S + GK + + S+C C +P A E +A F
Sbjct: 4 LAKYLPGATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNF 63
Query: 82 EMVNISDDEEPQD 94
E+V IS DE D
Sbjct: 64 EVVLISWDENESD 76
>sp|Q0SXE3|DSBD_SHIF8 Thiol:disulfide interchange protein DsbD OS=Shigella flexneri
serotype 5b (strain 8401) GN=dsbD PE=3 SV=1
Length = 565
Score = 32.7 bits (73), Expect = 0.89, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|P58162|DSBD_ECO57 Thiol:disulfide interchange protein DsbD OS=Escherichia coli
O157:H7 GN=dsbD PE=1 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|Q9AS75|TRH41_ORYSJ Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200
PE=2 SV=1
Length = 131
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 27 GGHI----NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFE 82
GG++ N ++ D + A GK ++ ++C C ++P +A E+++ P+F
Sbjct: 20 GGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYA---EMSQTYPQFM 76
Query: 83 MVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKSQVFNAKSPQVYR 130
+ I D +E D + D P +F GE ++ A P++ +
Sbjct: 77 FLTI-DVDELMDFSSSWDIRATP-TFFFLKNGEQVDKLVGANKPELEK 122
>sp|Q1R3C4|DSBD_ECOUT Thiol:disulfide interchange protein DsbD OS=Escherichia coli
(strain UTI89 / UPEC) GN=dsbD PE=3 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|Q0T9Q5|DSBD_ECOL5 Thiol:disulfide interchange protein DsbD OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=dsbD PE=3 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|Q328D2|DSBD_SHIDS Thiol:disulfide interchange protein DsbD OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=dsbD PE=3 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|P36655|DSBD_ECOLI Thiol:disulfide interchange protein DsbD OS=Escherichia coli
(strain K12) GN=dsbD PE=1 SV=4
Length = 565
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|Q8CVH5|DSBD_ECOL6 Thiol:disulfide interchange protein DsbD OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=dsbD PE=3 SV=1
Length = 565
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC E + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDMALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 /
A3(2) / M145) GN=trxA PE=1 SV=4
Length = 110
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 47 KPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNISDDEEP 92
KP++V ++C C +++P A AE K E+V ++ DE P
Sbjct: 22 KPVLVDFWAAWCGPCRQIAPSLEAIA--AEYGDKIEIVKLNIDENP 65
>sp|A7MMC7|DSBD_CROS8 Thiol:disulfide interchange protein DsbD OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=dsbD PE=3 SV=1
Length = 574
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 35 LDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEI 74
LD L AK GKP+M+ ++ +C AC E ++PE+
Sbjct: 468 LDRALAQAK--GKPVMLDLYADWCVACKEFEKYTFSAPEV 505
>sp|Q87KW0|DSBD_VIBPA Thiol:disulfide interchange protein DsbD OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=dsbD PE=3 SV=1
Length = 613
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 31 NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEI 74
N L+ L AK +GKP+M+ + +C AC E P++
Sbjct: 503 NVAELEEQLALAKAAGKPVMLDFYADWCVACKEFEKYTFHDPKV 546
>sp|Q92249|ERP38_NEUCR Protein disulfide-isomerase erp38 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erp38 PE=2 SV=2
Length = 369
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 13/84 (15%)
Query: 45 SGKPLMVLIHKSYCAACHELSPKFAASPEIAELAP-KFEMVNISDDEEPQDPKYAPDGDY 103
SGKP +V +C C L+P + E A K ++ + D E K
Sbjct: 37 SGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGK------- 89
Query: 104 VPRILYFGPQGEPKSQVFNAKSPQ 127
FG QG P + F+ KS Q
Sbjct: 90 -----RFGVQGFPTLKFFDGKSEQ 108
>sp|Q8DCZ0|DSBD_VIBVU Thiol:disulfide interchange protein DsbD OS=Vibrio vulnificus
(strain CMCP6) GN=dsbD PE=3 SV=1
Length = 593
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 31 NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNIS-DD 89
N + L L AK + KP+M+ + +C AC E P +A +F ++
Sbjct: 481 NVEELQQQLALAKQAKKPVMLDFYADWCVACKEFEKYTFHDPAVAAQLKQFVLLQADVTR 540
Query: 90 EEPQDPKY--APDGDYVPRILYFGPQGEPKS 118
+ QD + A +P I ++ QG P S
Sbjct: 541 NQAQDIELLQAQQVLGLPTIDFWDAQGNPVS 571
>sp|P37512|YYAL_BACSU Uncharacterized protein YyaL OS=Bacillus subtilis (strain 168)
GN=yyaL PE=4 SV=1
Length = 689
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 36 DAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELA-PKFEMVNISDDEEP 92
+ + AK KP++V I S C CH ++ + EIA L +F + + +E P
Sbjct: 33 EEAFEKAKRENKPVLVSIGYSTCHWCHVMAHESFEDEEIARLLNERFVAIKVDREERP 90
>sp|Q7MZX2|DSBD_PHOLL Thiol:disulfide interchange protein DsbD OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=dsbD PE=3
SV=1
Length = 575
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 16 VSCQGDLSRGFGGHINWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIA 75
V+ Q S F NW+ L+ + + S K +M+ + +C AC E + P++
Sbjct: 450 VTQQSQHSLNFRQINNWQELEQIM--TQNSHKTVMLDFYADWCTACKEFEKYTFSDPQVQ 507
Query: 76 E-----LAPKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGE--PKSQV 120
L + + N S ++ K + G +P IL+F QG+ P S+V
Sbjct: 508 SQLGDTLLLQANVTNNSPQQKQLLEKLSVRG--LPTILFFDSQGKEIPDSRV 557
>sp|Q7MGV6|DSBD_VIBVY Thiol:disulfide interchange protein DsbD OS=Vibrio vulnificus
(strain YJ016) GN=dsbD PE=3 SV=1
Length = 598
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 31 NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNIS-DD 89
N + L L AK + KP+M+ + +C AC E P +A +F ++
Sbjct: 486 NVEELQQQLALAKQAKKPVMLDFYADWCVACKEFEKYTFHDPAVAAQLKQFVLLQADVTR 545
Query: 90 EEPQDPKY--APDGDYVPRILYFGPQGEPKS 118
+ QD + A +P I ++ QG P S
Sbjct: 546 NQAQDIELLQAQQVLGLPTIDFWDAQGNPVS 576
>sp|Q9I104|DSBD2_PSEAE Thiol:disulfide interchange protein DsbD 2 OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=dsbD2 PE=3 SV=1
Length = 587
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 35 LDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNI---SDDEE 91
LD L AAK G+ +++ + +C +C + + A P++ ++ + +D+
Sbjct: 477 LDRQLAAAKAEGQWVLLDYYADWCVSCRIMEKQVFAKPDVLAALQGVRLLRLDVTADNAA 536
Query: 92 PQDPKYAPDGDYVPRILYFGPQGEPK 117
++ + P +++ GP+GE +
Sbjct: 537 SRELLHRYQVPGPPSLIWIGPEGEER 562
>sp|B4JDU5|KRR1_DROGR KRR1 small subunit processome component homolog OS=Drosophila
grimshawi GN=dbe PE=3 SV=1
Length = 341
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 6 VLAAVCVL--CVVSCQGDLSRGFGGHINWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHE 63
L ++ +L C V QG+ G + GLQ + M +H Y
Sbjct: 154 TLKSIELLTDCYVLVQGNTVAALGPY-------KGLQQVRDIVLETMNNVHPIYNIKALM 206
Query: 64 LSPKFAASPEIA-----ELAPKFEMVNISDDEEPQDPKYAPDGDYVPRILYFGPQGEPKS 118
+ + P++A PKF+ NIS ++P+ K P G+Y P P +P+S
Sbjct: 207 IKRELMKDPQLANEDWSRFLPKFKNKNISKRKQPKSRK--PKGEYTP-----FPPAQPES 259
Query: 119 QV 120
++
Sbjct: 260 KI 261
>sp|O51088|THIO_BORBU Thioredoxin OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=trxA PE=3 SV=1
Length = 117
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 47 KPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEMVNISDDEEPQDPKYAPDGDYVPR 106
+P ++ + ++C C LSP F + E + F V D ++ QD A +P
Sbjct: 29 RPAIIDFYANWCGPCKMLSPIFEKLSKKYENSIDFYKV---DTDKEQDISSAIGVQSLPT 85
Query: 107 ILYFGPQGEPKSQV 120
IL+ G+PK V
Sbjct: 86 ILFIPVDGKPKVSV 99
>sp|Q8Z1A8|DSBD_SALTI Thiol:disulfide interchange protein DsbD OS=Salmonella typhi
GN=dsbD PE=3 SV=1
Length = 567
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 28 GHINWKSL---DAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEM 83
H+N+ ++ D QA A+ GKP+M+ + +C AC E + P + ++ +
Sbjct: 448 AHLNFTAISTVDELNQALAQAKGKPVMLDFYADWCVACKEFEKYTFSDPRVQQVLGDTVL 507
Query: 84 V--NISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ N++ + QD +P IL+F QG+ + Q
Sbjct: 508 LQANVTAN-NAQDVALLKHLQVLGLPTILFFDAQGQEQPQ 546
>sp|Q3YUK4|DSBD_SHISS Thiol:disulfide interchange protein DsbD OS=Shigella sonnei (strain
Ss046) GN=dsbD PE=3 SV=1
Length = 565
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 29 HINW---KSLDAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAE-LAPKFEM 83
H+N+ K++D QA + GKP+M+ ++ +C AC + + P++ + LA +
Sbjct: 447 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKKFEKYTFSDPQVQKALADTVLL 506
Query: 84 VNISDDEEPQDPKYAPDGDY--VPRILYFGPQGEPKSQ 119
+ QD + +P IL+F QG+ Q
Sbjct: 507 QANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQ 544
>sp|Q8ZKC3|DSBD_SALTY Thiol:disulfide interchange protein DsbD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=dsbD PE=3 SV=1
Length = 567
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 28 GHINWKSL---DAGLQA-AKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKFEM 83
H+N+ ++ D QA A+ GKP+M+ + +C AC E + P + + +
Sbjct: 448 AHLNFTAISTVDELNQALAQAKGKPVMLDFYADWCVACKEFEKYTFSDPRVQQALGDTVL 507
Query: 84 V--NISDDEEPQDPKYAPDGDY--VPRILYFGPQG--EPKSQVFNAKSPQVYRHYYYD 135
+ N++ + QD +P IL+F QG +P+S+V + + +D
Sbjct: 508 LQANVTAN-NAQDVALLKHLQVLGLPTILFFNTQGQEQPQSRVTGFMDAATFSAHLHD 564
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 45 SGKPLMVLIHKSYCAACHELSPKFAASPEIA-ELAPKFEMVNISDDEEPQD-PKYAPDGD 102
S KP++V +C C ++P EIA E A + + + DE P P+YA G
Sbjct: 20 SSKPVLVDFWAEWCGPCKMIAPILE---EIADEYADRLRVAKFNIDENPNTPPQYAIRG- 75
Query: 103 YVPRILYF 110
+P +L F
Sbjct: 76 -IPTLLLF 82
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1
SV=1
Length = 122
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 31 NWKSLDAGLQAAKTSGKPLMVLIHKSYCAACHELSPKFAASPEIAELAPKF 81
N DA + AK +GK +++ S+C C ++P F AE A KF
Sbjct: 13 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVF------AEYAKKF 57
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,723,380
Number of Sequences: 539616
Number of extensions: 2530574
Number of successful extensions: 5671
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 5620
Number of HSP's gapped (non-prelim): 71
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)