Query psy17682
Match_columns 490
No_of_seqs 618 out of 4167
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 20:13:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-48 4.3E-53 379.1 43.9 353 113-475 37-393 (402)
2 1nr0_A Actin interacting prote 100.0 8.7E-45 3E-49 370.7 43.0 379 25-425 41-569 (611)
3 1vyh_C Platelet-activating fac 100.0 1E-43 3.6E-48 344.9 38.9 288 36-421 100-409 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 2.8E-43 9.6E-48 333.3 40.3 294 34-420 45-340 (340)
5 2ynn_A Coatomer subunit beta'; 100.0 1.2E-42 4.2E-47 323.6 38.2 291 35-423 4-302 (304)
6 3ow8_A WD repeat-containing pr 100.0 2.7E-43 9.4E-48 330.2 33.5 293 34-421 22-319 (321)
7 1nr0_A Actin interacting prote 100.0 7.6E-43 2.6E-47 356.4 39.4 339 36-421 139-609 (611)
8 2pbi_B Guanine nucleotide-bind 100.0 2.5E-42 8.4E-47 328.5 39.4 297 34-420 54-354 (354)
9 4gqb_B Methylosome protein 50; 100.0 2.1E-43 7.1E-48 333.6 30.3 304 40-382 26-333 (344)
10 3iz6_a 40S ribosomal protein R 100.0 7.7E-43 2.6E-47 335.5 33.1 312 35-382 57-377 (380)
11 3frx_A Guanine nucleotide-bind 100.0 3.2E-42 1.1E-46 323.0 36.2 298 35-424 8-318 (319)
12 4g56_B MGC81050 protein; prote 100.0 1.9E-42 6.4E-47 329.5 32.1 301 36-382 34-345 (357)
13 4ery_A WD repeat-containing pr 100.0 5.2E-41 1.8E-45 314.0 39.8 292 34-422 13-311 (312)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-41 5.8E-46 321.7 35.5 303 35-425 6-337 (345)
15 2xzm_R RACK1; ribosome, transl 100.0 1.8E-40 6E-45 314.6 39.3 299 35-424 12-341 (343)
16 2hes_X YDR267CP; beta-propelle 100.0 1.6E-40 5.5E-45 313.0 35.4 303 35-423 5-328 (330)
17 2ymu_A WD-40 repeat protein; u 100.0 9.3E-40 3.2E-44 332.0 43.0 330 26-420 246-577 (577)
18 2pm9_A Protein WEB1, protein t 100.0 4.6E-41 1.6E-45 327.3 30.3 341 43-424 11-415 (416)
19 2ymu_A WD-40 repeat protein; u 100.0 7.2E-39 2.5E-43 325.5 44.8 326 34-422 211-538 (577)
20 4g56_B MGC81050 protein; prote 100.0 6.5E-40 2.2E-44 312.0 33.0 293 109-425 41-345 (357)
21 4aow_A Guanine nucleotide-bind 100.0 3.8E-39 1.3E-43 304.9 35.3 302 36-382 30-339 (340)
22 1r5m_A SIR4-interacting protei 100.0 3.1E-39 1.1E-43 314.8 35.4 348 35-422 34-424 (425)
23 4gqb_B Methylosome protein 50; 100.0 5.6E-39 1.9E-43 303.3 36.0 294 111-425 31-333 (344)
24 1gxr_A ESG1, transducin-like e 100.0 2.5E-38 8.5E-43 298.6 40.3 326 42-422 7-336 (337)
25 1erj_A Transcriptional repress 100.0 5.8E-39 2E-43 309.9 36.4 309 37-382 57-391 (393)
26 3vl1_A 26S proteasome regulato 100.0 4.5E-39 1.5E-43 313.7 34.8 327 45-423 57-419 (420)
27 1vyh_C Platelet-activating fac 100.0 1.4E-38 4.9E-43 308.7 35.3 259 25-379 132-410 (410)
28 3ow8_A WD repeat-containing pr 100.0 9.7E-39 3.3E-43 299.3 31.8 249 36-379 72-320 (321)
29 3dm0_A Maltose-binding peripla 100.0 3.2E-38 1.1E-42 327.4 37.5 296 36-422 374-692 (694)
30 3ei3_B DNA damage-binding prot 100.0 1.5E-37 5E-42 299.3 37.8 298 34-423 63-382 (383)
31 2ynn_A Coatomer subunit beta'; 100.0 1.2E-37 4.1E-42 289.8 35.7 254 157-429 5-265 (304)
32 2pm7_B Protein transport prote 100.0 1.4E-37 4.7E-42 288.4 35.3 257 37-381 2-286 (297)
33 3iz6_a 40S ribosomal protein R 100.0 1.1E-38 3.6E-43 306.6 28.4 297 110-425 66-377 (380)
34 4e54_B DNA damage-binding prot 100.0 5.3E-39 1.8E-43 314.6 25.4 302 35-425 110-432 (435)
35 3zwl_B Eukaryotic translation 100.0 1.3E-36 4.4E-41 290.6 39.5 294 32-425 20-348 (369)
36 3frx_A Guanine nucleotide-bind 100.0 2.6E-37 8.9E-42 289.6 33.2 253 34-381 55-318 (319)
37 3k26_A Polycomb protein EED; W 100.0 1.9E-37 6.6E-42 296.0 31.4 297 38-422 12-365 (366)
38 3v7d_B Cell division control p 100.0 5.2E-36 1.8E-40 296.0 41.4 327 28-412 105-450 (464)
39 2xzm_R RACK1; ribosome, transl 100.0 1.8E-36 6.3E-41 286.9 36.2 254 35-381 67-341 (343)
40 2oaj_A Protein SNI1; WD40 repe 100.0 1.9E-36 6.3E-41 320.4 39.8 215 37-294 10-247 (902)
41 3i2n_A WD repeat-containing pr 100.0 9.6E-37 3.3E-41 290.3 34.0 305 36-382 10-355 (357)
42 1got_B GT-beta; complex (GTP-b 100.0 1.8E-36 6.1E-41 286.6 35.5 261 25-377 79-340 (340)
43 1sq9_A Antiviral protein SKI8; 100.0 4.8E-37 1.6E-41 297.0 31.9 313 35-382 7-397 (397)
44 2pm9_A Protein WEB1, protein t 100.0 1.2E-37 4.1E-42 303.1 27.9 326 25-381 47-415 (416)
45 1gxr_A ESG1, transducin-like e 100.0 5.5E-36 1.9E-40 282.5 38.1 294 36-379 43-336 (337)
46 3odt_A Protein DOA1; ubiquitin 100.0 4.6E-36 1.6E-40 280.1 37.0 295 28-425 2-298 (313)
47 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-36 1.1E-40 332.5 41.8 342 34-429 605-1080(1249)
48 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.8E-37 2.7E-41 289.6 31.4 258 39-383 56-338 (345)
49 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-37 7.3E-42 307.0 27.6 351 35-424 124-518 (524)
50 2hes_X YDR267CP; beta-propelle 100.0 1.1E-36 3.9E-41 286.6 30.8 273 25-380 36-328 (330)
51 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-35 6.2E-40 290.6 39.0 325 35-424 109-443 (445)
52 3gre_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 296.5 31.6 305 34-420 52-437 (437)
53 2oaj_A Protein SNI1; WD40 repe 100.0 7.6E-36 2.6E-40 315.7 37.5 366 25-425 81-666 (902)
54 1erj_A Transcriptional repress 100.0 3.3E-35 1.1E-39 283.6 37.7 283 110-424 64-390 (393)
55 1pgu_A Actin interacting prote 100.0 2E-35 7E-40 302.2 38.3 369 25-424 41-573 (615)
56 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-35 4.3E-40 314.0 37.4 339 35-424 4-387 (814)
57 4aez_A CDC20, WD repeat-contai 100.0 5.5E-35 1.9E-39 283.0 38.8 246 163-425 132-382 (401)
58 2pbi_B Guanine nucleotide-bind 100.0 2.1E-35 7.1E-40 280.7 35.0 265 25-377 88-354 (354)
59 1pgu_A Actin interacting prote 100.0 6.2E-35 2.1E-39 298.6 40.8 339 33-423 149-614 (615)
60 3bg1_A Protein SEC13 homolog; 100.0 7.6E-37 2.6E-41 286.0 23.4 254 38-381 7-294 (316)
61 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-35 4.1E-40 284.4 31.7 294 40-425 4-363 (372)
62 3dw8_B Serine/threonine-protei 100.0 2.5E-35 8.5E-40 289.6 33.2 305 41-420 25-443 (447)
63 2pm7_B Protein transport prote 100.0 1.4E-34 4.9E-39 268.1 35.8 254 160-425 4-287 (297)
64 3sfz_A APAF-1, apoptotic pepti 100.0 2.1E-36 7.1E-41 334.1 27.4 359 26-421 865-1247(1249)
65 3dwl_C Actin-related protein 2 100.0 4.1E-36 1.4E-40 288.5 23.3 296 39-378 6-377 (377)
66 4ery_A WD repeat-containing pr 100.0 3E-34 1E-38 268.1 34.9 254 158-427 16-272 (312)
67 4a11_B DNA excision repair pro 100.0 6.3E-34 2.2E-38 275.8 37.3 310 34-425 33-367 (408)
68 3dm0_A Maltose-binding peripla 100.0 1.9E-34 6.4E-39 299.1 33.5 254 35-379 421-692 (694)
69 3jrp_A Fusion protein of prote 100.0 2E-34 6.9E-39 276.5 31.1 258 36-382 3-289 (379)
70 1r5m_A SIR4-interacting protei 100.0 2.1E-34 7.2E-39 280.6 30.4 283 43-379 107-424 (425)
71 4h5i_A Guanine nucleotide-exch 100.0 1.4E-34 4.7E-39 276.0 28.2 306 45-381 15-344 (365)
72 4aow_A Guanine nucleotide-bind 100.0 1.1E-33 3.8E-38 267.3 34.2 292 109-425 37-339 (340)
73 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-33 5.5E-38 297.8 38.7 304 25-380 37-386 (814)
74 1sq9_A Antiviral protein SKI8; 100.0 5.8E-34 2E-38 275.4 32.1 297 109-424 15-396 (397)
75 2xyi_A Probable histone-bindin 100.0 1E-33 3.5E-38 276.5 33.6 273 37-381 121-411 (430)
76 3f3f_A Nucleoporin SEH1; struc 100.0 9.8E-34 3.3E-38 268.1 32.3 265 37-383 4-340 (351)
77 2j04_A TAU60, YPL007P, hypothe 100.0 6E-34 2.1E-38 275.4 29.4 300 40-415 11-351 (588)
78 3i2n_A WD repeat-containing pr 100.0 1.9E-33 6.5E-38 267.5 32.5 293 109-425 17-355 (357)
79 4aez_A CDC20, WD repeat-contai 100.0 2.2E-33 7.7E-38 271.7 33.0 268 24-384 114-384 (401)
80 4gga_A P55CDC, cell division c 100.0 1.3E-32 4.5E-37 268.0 38.6 245 162-425 144-397 (420)
81 1yfq_A Cell cycle arrest prote 100.0 8.6E-34 2.9E-38 268.3 29.0 276 39-415 6-313 (342)
82 3vl1_A 26S proteasome regulato 100.0 1.2E-32 4.2E-37 268.2 37.3 292 40-380 94-419 (420)
83 3bg1_A Protein SEC13 homolog; 100.0 2.8E-34 9.5E-39 268.6 24.3 252 160-425 8-295 (316)
84 1p22_A F-BOX/WD-repeat protein 100.0 7.7E-33 2.6E-37 270.9 34.6 305 34-404 123-434 (435)
85 3mmy_A MRNA export factor; mRN 100.0 6.4E-33 2.2E-37 264.7 32.6 286 31-414 26-335 (368)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 3.8E-33 1.3E-37 270.2 30.2 302 45-382 35-344 (402)
87 3f3f_A Nucleoporin SEH1; struc 100.0 3.5E-32 1.2E-36 257.4 35.7 264 159-432 5-346 (351)
88 3jrp_A Fusion protein of prote 100.0 1.2E-32 4E-37 264.1 32.3 262 158-431 4-295 (379)
89 4ggc_A P55CDC, cell division c 100.0 1.4E-31 4.6E-36 250.4 38.7 244 162-424 64-316 (318)
90 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-33 4.2E-38 280.1 25.6 265 130-409 176-458 (524)
91 3k26_A Polycomb protein EED; W 100.0 2E-33 6.8E-38 268.2 24.6 246 43-379 68-365 (366)
92 3jro_A Fusion protein of prote 100.0 1.7E-33 5.8E-38 293.7 25.7 255 37-380 2-285 (753)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.5E-32 2.2E-36 265.5 33.7 253 160-425 97-393 (450)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-31 1E-35 260.4 37.4 293 25-381 141-443 (445)
95 3dwl_C Actin-related protein 2 100.0 4.3E-33 1.5E-37 267.4 23.0 250 160-423 6-281 (377)
96 4h5i_A Guanine nucleotide-exch 100.0 4E-32 1.4E-36 259.0 28.7 298 112-424 16-344 (365)
97 3v7d_B Cell division control p 100.0 2.4E-31 8.2E-36 262.6 34.9 273 113-425 125-423 (464)
98 4e54_B DNA damage-binding prot 100.0 5.8E-32 2E-36 264.6 28.6 268 25-337 144-432 (435)
99 3zwl_B Eukaryotic translation 100.0 4.8E-31 1.6E-35 251.8 34.2 249 158-425 25-306 (369)
100 3ei3_B DNA damage-binding prot 100.0 4.5E-31 1.5E-35 253.9 33.6 257 158-426 66-342 (383)
101 4gga_A P55CDC, cell division c 100.0 2E-30 6.8E-35 252.5 37.0 268 24-338 126-398 (420)
102 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-30 5.7E-35 242.3 34.3 256 25-382 41-298 (313)
103 3vu4_A KMHSV2; beta-propeller 100.0 7.6E-31 2.6E-35 249.3 32.2 286 35-382 10-338 (355)
104 1k8k_C P40, ARP2/3 complex 41 100.0 6.5E-31 2.2E-35 251.5 31.9 249 160-423 3-274 (372)
105 4gq1_A NUP37; propeller, trans 100.0 7.1E-32 2.4E-36 260.1 24.7 250 163-423 87-389 (393)
106 3lrv_A PRE-mRNA-splicing facto 100.0 3E-31 1E-35 251.1 26.8 279 50-381 42-334 (343)
107 3bws_A Protein LP49; two-domai 100.0 3.5E-30 1.2E-34 251.9 34.7 291 37-423 116-432 (433)
108 3dw8_B Serine/threonine-protei 100.0 3.1E-31 1E-35 260.4 27.1 297 36-379 73-445 (447)
109 2xyi_A Probable histone-bindin 100.0 1.2E-30 4E-35 254.9 29.5 260 160-424 123-411 (430)
110 1yfq_A Cell cycle arrest prote 100.0 1.4E-30 4.9E-35 246.2 27.5 249 161-425 7-284 (342)
111 3gre_A Serine/threonine-protei 100.0 1.3E-30 4.3E-35 255.4 26.6 259 157-430 54-366 (437)
112 4a11_B DNA excision repair pro 100.0 1.5E-29 5.1E-34 245.0 32.4 250 41-383 96-368 (408)
113 4ggc_A P55CDC, cell division c 100.0 7.2E-29 2.5E-33 231.9 35.6 266 24-336 46-316 (318)
114 3jro_A Fusion protein of prote 100.0 1.6E-30 5.6E-35 271.2 26.6 254 159-424 3-286 (753)
115 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-29 4.2E-34 248.2 31.0 269 112-425 135-416 (435)
116 2j04_A TAU60, YPL007P, hypothe 100.0 4.5E-30 1.5E-34 248.4 26.6 260 111-422 16-296 (588)
117 1l0q_A Surface layer protein; 100.0 9.4E-29 3.2E-33 238.3 35.7 274 58-382 3-277 (391)
118 4gq1_A NUP37; propeller, trans 100.0 6.3E-31 2.1E-35 253.5 19.3 206 160-380 131-389 (393)
119 1l0q_A Surface layer protein; 100.0 1.8E-28 6E-33 236.4 35.0 271 129-429 4-281 (391)
120 3lrv_A PRE-mRNA-splicing facto 100.0 3.9E-29 1.3E-33 236.6 27.7 270 127-424 48-334 (343)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.6E-28 9E-33 239.8 34.5 256 39-381 97-392 (450)
122 3mmy_A MRNA export factor; mRN 100.0 1.7E-28 6E-33 233.9 30.1 254 155-425 29-306 (368)
123 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-27 3.6E-32 227.6 29.1 279 109-425 18-338 (355)
124 3bws_A Protein LP49; two-domai 100.0 3.3E-27 1.1E-31 230.7 32.9 252 160-425 118-392 (433)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-27 9E-32 229.5 31.6 314 43-407 61-410 (415)
126 2w18_A PALB2, fancn, partner a 100.0 1E-27 3.5E-32 218.1 25.4 182 134-333 154-355 (356)
127 2w18_A PALB2, fancn, partner a 100.0 7.2E-27 2.5E-31 212.5 29.6 197 162-379 133-356 (356)
128 1nir_A Nitrite reductase; hemo 99.9 5.9E-25 2E-29 219.6 35.4 335 51-428 144-519 (543)
129 1nir_A Nitrite reductase; hemo 99.9 1.2E-24 4E-29 217.4 34.2 310 25-382 161-516 (543)
130 2ecf_A Dipeptidyl peptidase IV 99.9 1E-24 3.5E-29 227.9 32.2 341 44-412 36-442 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 5E-24 1.7E-28 206.5 29.1 285 112-425 64-389 (415)
132 3vgz_A Uncharacterized protein 99.9 3.7E-23 1.3E-27 196.1 32.1 235 167-412 90-331 (353)
133 3u4y_A Uncharacterized protein 99.9 1.1E-22 3.7E-27 191.2 34.5 284 50-382 3-306 (331)
134 1xfd_A DIP, dipeptidyl aminope 99.9 3.9E-24 1.3E-28 223.0 26.0 332 46-412 18-427 (723)
135 1ri6_A Putative isomerase YBHE 99.9 8.4E-23 2.9E-27 192.7 32.7 277 130-423 8-308 (343)
136 1ri6_A Putative isomerase YBHE 99.9 6.1E-23 2.1E-27 193.6 30.6 310 58-407 6-335 (343)
137 3u4y_A Uncharacterized protein 99.9 3.5E-22 1.2E-26 187.7 32.0 275 129-425 12-306 (331)
138 2z3z_A Dipeptidyl aminopeptida 99.9 7.1E-23 2.4E-27 212.8 28.9 339 46-425 27-437 (706)
139 1k32_A Tricorn protease; prote 99.9 1.3E-22 4.4E-27 219.4 30.5 350 25-425 35-463 (1045)
140 1k32_A Tricorn protease; prote 99.9 8.2E-22 2.8E-26 213.1 35.1 337 35-425 236-639 (1045)
141 2ojh_A Uncharacterized protein 99.9 7.4E-22 2.5E-26 181.8 27.5 254 24-370 23-293 (297)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 3.6E-22 1.2E-26 194.1 26.5 215 163-380 90-333 (434)
143 1pby_B Quinohemoprotein amine 99.9 5.8E-22 2E-26 186.4 27.1 278 129-430 3-317 (337)
144 2ojh_A Uncharacterized protein 99.9 4.4E-22 1.5E-26 183.3 23.7 255 133-414 18-291 (297)
145 3hfq_A Uncharacterized protein 99.9 5E-21 1.7E-25 181.1 29.7 281 135-431 14-326 (347)
146 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-21 1.6E-25 200.3 31.0 282 111-423 37-413 (741)
147 1xfd_A DIP, dipeptidyl aminope 99.9 1.3E-21 4.6E-26 203.8 26.8 288 112-424 18-394 (723)
148 3o4h_A Acylamino-acid-releasin 99.9 1.6E-21 5.3E-26 198.0 26.6 230 166-424 65-314 (582)
149 2z3z_A Dipeptidyl aminopeptida 99.9 8.8E-21 3E-25 197.1 31.6 290 45-382 82-437 (706)
150 3vgz_A Uncharacterized protein 99.9 1.4E-20 4.8E-25 178.3 29.3 247 163-427 38-307 (353)
151 3hfq_A Uncharacterized protein 99.9 3.5E-20 1.2E-24 175.3 32.0 212 163-380 83-317 (347)
152 3scy_A Hypothetical bacterial 99.9 1.5E-19 5E-24 172.0 36.1 233 164-403 98-360 (361)
153 1pby_B Quinohemoprotein amine 99.9 4.2E-20 1.4E-24 173.6 29.2 268 58-382 2-312 (337)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-21 1.3E-25 186.9 21.1 209 165-381 36-279 (434)
155 3scy_A Hypothetical bacterial 99.9 2E-19 6.9E-24 171.0 30.5 273 134-423 24-337 (361)
156 1z68_A Fibroblast activation p 99.9 3.4E-20 1.1E-24 193.1 25.4 336 49-425 20-445 (719)
157 3pe7_A Oligogalacturonate lyas 99.9 8E-20 2.7E-24 175.6 24.7 243 164-422 79-381 (388)
158 1jmx_B Amine dehydrogenase; ox 99.9 8.7E-20 3E-24 172.4 24.3 237 170-428 4-330 (349)
159 1jmx_B Amine dehydrogenase; ox 99.8 2.4E-19 8.3E-24 169.3 23.5 201 167-382 44-327 (349)
160 4a5s_A Dipeptidyl peptidase 4 99.8 7.7E-18 2.6E-22 175.5 34.9 329 45-412 17-433 (740)
161 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.3E-18 1.5E-22 162.0 28.8 255 164-430 38-347 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.4E-18 2.9E-22 160.0 29.8 207 169-381 86-342 (365)
163 1z68_A Fibroblast activation p 99.8 4.6E-19 1.6E-23 184.5 21.1 279 114-423 19-391 (719)
164 3o4h_A Acylamino-acid-releasin 99.8 2.3E-18 7.9E-23 174.6 20.3 233 164-421 20-274 (582)
165 4a5s_A Dipeptidyl peptidase 4 99.8 5.2E-17 1.8E-21 169.2 25.1 252 166-425 17-355 (740)
166 3c5m_A Oligogalacturonate lyas 99.8 3.5E-17 1.2E-21 157.4 22.0 234 170-422 85-381 (396)
167 3pe7_A Oligogalacturonate lyas 99.8 2.4E-16 8.2E-21 151.2 26.6 254 160-430 25-335 (388)
168 1q7f_A NHL, brain tumor CG1071 99.8 1.8E-15 6.3E-20 138.6 30.6 251 41-382 26-282 (286)
169 3fvz_A Peptidyl-glycine alpha- 99.8 8.5E-16 2.9E-20 143.9 28.2 245 165-423 23-322 (329)
170 3azo_A Aminopeptidase; POP fam 99.7 4.2E-16 1.4E-20 160.6 27.6 238 174-425 87-371 (662)
171 1q7f_A NHL, brain tumor CG1071 99.7 4.1E-15 1.4E-19 136.3 31.2 249 163-424 27-281 (286)
172 2oiz_A Aromatic amine dehydrog 99.7 1.9E-15 6.5E-20 143.1 27.6 221 166-407 108-360 (361)
173 2dg1_A DRP35, lactonase; beta 99.7 4.6E-15 1.6E-19 139.1 29.7 232 160-410 39-295 (333)
174 3fvz_A Peptidyl-glycine alpha- 99.7 8.6E-15 3E-19 137.0 28.9 214 163-381 88-323 (329)
175 2oiz_A Aromatic amine dehydrog 99.7 5.3E-15 1.8E-19 140.1 24.3 267 135-425 29-336 (361)
176 3dsm_A Uncharacterized protein 99.7 9.8E-15 3.3E-19 136.5 25.5 273 65-382 15-303 (328)
177 3e5z_A Putative gluconolactona 99.7 3.6E-14 1.2E-18 130.6 27.0 241 158-424 20-285 (296)
178 3azo_A Aminopeptidase; POP fam 99.7 5.3E-15 1.8E-19 152.3 22.5 249 159-422 17-322 (662)
179 2z2n_A Virginiamycin B lyase; 99.7 3E-12 1E-16 117.6 38.9 237 166-423 57-295 (299)
180 3dsm_A Uncharacterized protein 99.7 8.5E-14 2.9E-18 130.1 28.4 270 135-431 15-309 (328)
181 2dg1_A DRP35, lactonase; beta 99.6 3.6E-14 1.2E-18 133.0 24.5 241 166-421 6-261 (333)
182 1qks_A Cytochrome CD1 nitrite 99.6 4.9E-12 1.7E-16 126.0 40.9 329 58-425 168-540 (567)
183 3c5m_A Oligogalacturonate lyas 99.6 2.8E-15 9.5E-20 144.0 16.6 243 164-425 34-331 (396)
184 2bkl_A Prolyl endopeptidase; m 99.6 1.3E-13 4.5E-18 142.5 28.8 247 163-425 118-399 (695)
185 2gop_A Trilobed protease; beta 99.6 1.6E-13 5.3E-18 129.4 26.9 242 136-425 42-332 (347)
186 2bkl_A Prolyl endopeptidase; m 99.6 7.3E-14 2.5E-18 144.4 25.5 202 169-382 171-399 (695)
187 3e5z_A Putative gluconolactona 99.6 3.1E-13 1.1E-17 124.4 27.1 248 34-381 17-287 (296)
188 2xdw_A Prolyl endopeptidase; a 99.6 3.6E-13 1.2E-17 139.6 29.6 206 168-382 173-416 (710)
189 2xdw_A Prolyl endopeptidase; a 99.6 2.9E-13 1E-17 140.3 28.6 247 163-425 122-416 (710)
190 1rwi_B Serine/threonine-protei 99.6 3.6E-13 1.2E-17 122.0 25.8 200 166-382 67-266 (270)
191 3no2_A Uncharacterized protein 99.6 4.1E-13 1.4E-17 121.7 25.6 226 179-425 6-253 (276)
192 1qks_A Cytochrome CD1 nitrite 99.6 1.6E-12 5.5E-17 129.4 31.2 231 179-423 168-421 (567)
193 1rwi_B Serine/threonine-protei 99.6 6.4E-13 2.2E-17 120.4 25.8 236 167-423 25-264 (270)
194 2gop_A Trilobed protease; beta 99.6 1E-12 3.6E-17 123.7 26.7 262 45-379 15-330 (347)
195 2z2n_A Virginiamycin B lyase; 99.6 1.9E-11 6.7E-16 112.1 34.3 238 163-421 12-253 (299)
196 2qc5_A Streptogramin B lactona 99.6 7E-11 2.4E-15 108.4 37.6 234 166-422 62-297 (300)
197 3no2_A Uncharacterized protein 99.5 4.1E-12 1.4E-16 115.2 26.2 183 166-367 37-230 (276)
198 1yr2_A Prolyl oligopeptidase; 99.5 8E-12 2.7E-16 130.1 27.7 245 163-425 160-443 (741)
199 2mad_H Methylamine dehydrogena 99.5 1.1E-10 3.8E-15 110.5 33.1 261 138-425 48-352 (373)
200 3hrp_A Uncharacterized protein 99.5 1.8E-11 6E-16 117.7 27.2 237 166-421 131-406 (409)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.6E-11 8.8E-16 112.3 27.4 246 161-422 13-298 (314)
202 3sjl_D Methylamine dehydrogena 99.5 1.1E-11 3.7E-16 116.0 24.1 272 136-430 58-370 (386)
203 1yr2_A Prolyl oligopeptidase; 99.5 1.1E-11 3.7E-16 129.1 26.6 183 189-382 244-443 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2E-11 6.9E-16 113.0 25.8 252 39-335 12-299 (314)
205 3sjl_D Methylamine dehydrogena 99.4 3.2E-10 1.1E-14 106.1 31.6 303 50-405 38-384 (386)
206 2qc5_A Streptogramin B lactona 99.4 8.1E-10 2.8E-14 101.3 33.2 238 164-421 18-258 (300)
207 3g4e_A Regucalcin; six bladed 99.4 1.9E-10 6.6E-15 105.6 28.9 226 163-410 10-257 (297)
208 2mad_H Methylamine dehydrogena 99.4 2.9E-09 1E-13 100.7 36.4 246 115-382 70-352 (373)
209 3c75_H MADH, methylamine dehyd 99.4 2.1E-11 7.2E-16 116.1 20.9 269 137-429 99-408 (426)
210 3iuj_A Prolyl endopeptidase; h 99.4 8.1E-11 2.8E-15 121.4 26.9 202 170-382 179-407 (693)
211 3iuj_A Prolyl endopeptidase; h 99.4 5.4E-11 1.8E-15 122.7 23.3 245 163-425 126-407 (693)
212 1xip_A Nucleoporin NUP159; bet 99.4 1.4E-11 4.8E-16 115.7 17.1 135 163-319 86-231 (388)
213 3dr2_A Exported gluconolactona 99.4 2.5E-10 8.6E-15 105.3 25.4 239 159-421 38-302 (305)
214 3g4e_A Regucalcin; six bladed 99.4 8.5E-10 2.9E-14 101.3 28.3 191 166-370 54-263 (297)
215 2ghs_A AGR_C_1268P; regucalcin 99.3 2.3E-09 7.8E-14 99.8 30.2 220 167-410 50-287 (326)
216 2ece_A 462AA long hypothetical 99.3 1.2E-10 4E-15 109.6 20.2 234 175-413 93-399 (462)
217 3hrp_A Uncharacterized protein 99.3 1.4E-09 4.6E-14 104.5 28.0 238 114-378 134-408 (409)
218 3dr2_A Exported gluconolactona 99.3 9.3E-10 3.2E-14 101.4 25.9 236 35-368 35-296 (305)
219 3c75_H MADH, methylamine dehyd 99.3 2.4E-09 8.1E-14 102.0 28.4 281 54-382 82-404 (426)
220 1xip_A Nucleoporin NUP159; bet 99.3 3.7E-11 1.3E-15 112.8 15.4 178 167-365 39-230 (388)
221 2qe8_A Uncharacterized protein 99.3 5.6E-10 1.9E-14 104.8 22.9 241 166-414 17-310 (343)
222 1fwx_A Nitrous oxide reductase 99.2 3.8E-10 1.3E-14 109.9 19.3 242 175-430 99-437 (595)
223 2qe8_A Uncharacterized protein 99.2 9.6E-10 3.3E-14 103.1 20.1 206 163-376 64-317 (343)
224 2ghs_A AGR_C_1268P; regucalcin 99.2 2E-08 6.7E-13 93.4 28.6 228 44-320 48-290 (326)
225 1mda_H Methylamine dehydrogena 99.2 5.5E-10 1.9E-14 104.6 17.8 210 168-404 126-366 (368)
226 2iwa_A Glutamine cyclotransfer 99.2 1.1E-08 3.7E-13 90.6 23.9 201 167-382 22-239 (266)
227 1yiq_A Quinohemoprotein alcoho 99.2 4.5E-08 1.5E-12 100.3 31.4 215 187-410 182-533 (689)
228 2hz6_A Endoplasmic reticulum t 99.2 2.8E-11 9.6E-16 114.7 7.0 201 179-407 10-216 (369)
229 2ece_A 462AA long hypothetical 99.1 7.7E-09 2.6E-13 97.3 21.3 196 225-424 93-353 (462)
230 1kb0_A Quinohemoprotein alcoho 99.1 1.2E-07 3.9E-12 97.1 30.7 215 187-410 189-535 (677)
231 1npe_A Nidogen, entactin; glyc 99.1 3.4E-07 1.2E-11 82.3 28.7 223 166-407 36-263 (267)
232 1mda_H Methylamine dehydrogena 99.0 9.9E-09 3.4E-13 96.1 18.4 232 179-428 33-351 (368)
233 1fwx_A Nitrous oxide reductase 99.0 4.4E-08 1.5E-12 95.6 22.8 240 180-423 17-361 (595)
234 3nol_A Glutamine cyclotransfer 99.0 5.8E-08 2E-12 84.8 19.9 183 168-367 45-243 (262)
235 1npe_A Nidogen, entactin; glyc 99.0 2.8E-06 9.7E-11 76.2 30.9 234 180-425 3-240 (267)
236 1kb0_A Quinohemoprotein alcoho 98.9 4.9E-07 1.7E-11 92.5 27.4 190 169-366 246-537 (677)
237 4a2l_A BT_4663, two-component 98.9 7.7E-06 2.6E-10 85.7 36.9 335 43-423 213-571 (795)
238 3hxj_A Pyrrolo-quinoline quino 98.9 2.6E-07 9E-12 85.7 23.1 204 179-412 108-312 (330)
239 3mbr_X Glutamine cyclotransfer 98.9 5.1E-07 1.7E-11 78.2 22.5 186 166-368 21-223 (243)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.8E-06 1.6E-10 78.9 31.8 224 129-382 105-339 (376)
241 3nok_A Glutaminyl cyclase; bet 98.9 4E-07 1.4E-11 79.5 21.5 184 167-368 56-254 (268)
242 4a2l_A BT_4663, two-component 98.9 2E-05 6.7E-10 82.6 37.2 331 44-423 262-614 (795)
243 2iwa_A Glutamine cyclotransfer 98.9 9.7E-07 3.3E-11 78.1 22.7 193 217-421 22-233 (266)
244 1yiq_A Quinohemoprotein alcoho 98.8 7.6E-07 2.6E-11 91.2 23.6 238 179-427 122-509 (689)
245 2hz6_A Endoplasmic reticulum t 98.8 1.6E-09 5.5E-14 102.6 2.5 143 229-384 10-153 (369)
246 3nol_A Glutamine cyclotransfer 98.8 1.8E-06 6E-11 75.5 20.8 195 214-421 39-252 (262)
247 2fp8_A Strictosidine synthase; 98.8 1.3E-05 4.5E-10 74.0 28.4 240 166-421 19-311 (322)
248 3hxj_A Pyrrolo-quinoline quino 98.8 2.5E-06 8.7E-11 79.0 23.6 217 129-381 109-325 (330)
249 1kv9_A Type II quinohemoprotei 98.7 2.4E-05 8.1E-10 79.9 32.0 213 187-408 177-514 (668)
250 1ijq_A LDL receptor, low-densi 98.7 6.7E-05 2.3E-09 69.0 32.2 207 165-383 29-241 (316)
251 2ad6_A Methanol dehydrogenase 98.7 1.9E-05 6.6E-10 78.9 29.4 222 180-411 162-523 (571)
252 3nok_A Glutaminyl cyclase; bet 98.7 2.3E-06 7.7E-11 74.8 19.2 189 218-421 57-262 (268)
253 2p4o_A Hypothetical protein; p 98.7 2E-05 7E-10 72.1 26.8 223 166-410 32-273 (306)
254 3q7m_A Lipoprotein YFGL, BAMB; 98.7 9.3E-06 3.2E-10 76.8 25.3 220 179-425 104-339 (376)
255 3qqz_A Putative uncharacterize 98.6 7.1E-05 2.4E-09 65.7 28.0 208 211-423 22-251 (255)
256 2xe4_A Oligopeptidase B; hydro 98.6 1.4E-05 4.9E-10 82.8 27.0 200 167-378 175-396 (751)
257 3p5b_L Low density lipoprotein 98.6 0.00014 4.8E-09 69.2 31.8 231 136-384 91-324 (400)
258 1ijq_A LDL receptor, low-densi 98.6 0.00018 6.1E-09 66.1 31.6 227 188-430 10-245 (316)
259 3v9f_A Two-component system se 98.6 0.00014 4.9E-09 75.9 33.9 341 44-422 257-610 (781)
260 3v9f_A Two-component system se 98.6 0.00029 1E-08 73.5 35.4 329 45-413 211-557 (781)
261 1k3i_A Galactose oxidase precu 98.6 6.2E-06 2.1E-10 84.3 22.0 235 167-414 244-530 (656)
262 3v64_C Agrin; beta propeller, 98.6 0.00021 7.2E-09 66.6 30.6 246 165-430 33-282 (349)
263 3v64_C Agrin; beta propeller, 98.6 0.00021 7.3E-09 66.6 30.4 205 165-383 72-278 (349)
264 3v65_B Low-density lipoprotein 98.6 0.00015 5E-09 68.8 29.5 205 165-383 115-321 (386)
265 1flg_A Protein (quinoprotein e 98.6 0.00022 7.5E-09 71.3 32.1 162 238-408 291-542 (582)
266 3mbr_X Glutamine cyclotransfer 98.5 2.7E-05 9.1E-10 67.4 21.9 194 216-422 21-232 (243)
267 2p4o_A Hypothetical protein; p 98.5 4.5E-05 1.5E-09 69.9 24.5 199 216-424 32-241 (306)
268 2fp8_A Strictosidine synthase; 98.5 7.5E-05 2.6E-09 68.9 25.7 199 217-425 20-269 (322)
269 3v65_B Low-density lipoprotein 98.5 0.00031 1.1E-08 66.5 30.4 244 168-430 79-325 (386)
270 3qqz_A Putative uncharacterize 98.5 9.8E-05 3.3E-09 64.8 24.2 202 161-377 22-250 (255)
271 1kv9_A Type II quinohemoprotei 98.5 2.4E-05 8.3E-10 79.8 23.2 235 179-427 118-492 (668)
272 2ism_A Putative oxidoreductase 98.5 0.00022 7.4E-09 66.6 27.9 235 165-413 30-333 (352)
273 3m0c_C LDL receptor, low-densi 98.5 0.00053 1.8E-08 70.8 32.5 214 163-384 421-636 (791)
274 1w6s_A Methanol dehydrogenase 98.4 0.00047 1.6E-08 68.9 29.6 215 186-408 180-529 (599)
275 2g8s_A Glucose/sorbosone dehyd 98.4 0.00042 1.4E-08 64.7 27.5 252 165-422 17-351 (353)
276 3p5b_L Low density lipoprotein 98.4 0.00081 2.8E-08 63.9 29.8 234 180-429 85-326 (400)
277 3tc9_A Hypothetical hydrolase; 98.4 8.6E-05 2.9E-09 71.4 23.1 239 166-421 137-426 (430)
278 4hw6_A Hypothetical protein, I 98.4 0.0002 6.8E-09 68.9 25.6 240 166-421 139-429 (433)
279 2xe4_A Oligopeptidase B; hydro 98.4 4.5E-05 1.5E-09 79.1 22.2 160 217-380 175-354 (751)
280 4hw6_A Hypothetical protein, I 98.4 0.00015 5E-09 69.8 24.2 202 217-425 140-374 (433)
281 2ad6_A Methanol dehydrogenase 98.3 0.00017 5.8E-09 72.0 25.2 234 179-425 116-496 (571)
282 3sov_A LRP-6, low-density lipo 98.3 0.0012 4E-08 60.6 28.9 229 136-384 12-242 (318)
283 1k3i_A Galactose oxidase precu 98.3 2.2E-05 7.6E-10 80.2 17.5 247 170-425 190-499 (656)
284 3a9g_A Putative uncharacterize 98.3 0.0012 4E-08 61.6 27.7 246 166-423 29-350 (354)
285 3s94_A LRP-6, low-density lipo 98.2 0.0057 1.9E-07 61.5 36.3 333 40-422 35-422 (619)
286 3kya_A Putative phosphatase; s 98.2 0.001 3.6E-08 64.2 26.6 159 217-380 140-341 (496)
287 3tc9_A Hypothetical hydrolase; 98.2 0.00043 1.5E-08 66.5 24.0 155 217-380 138-301 (430)
288 2p9w_A MAL S 1 allergenic prot 98.2 0.00055 1.9E-08 61.9 22.7 160 214-380 11-215 (334)
289 1w6s_A Methanol dehydrogenase 98.2 0.00048 1.6E-08 68.9 23.5 151 180-339 123-346 (599)
290 3m0c_C LDL receptor, low-densi 98.1 0.0057 2E-07 63.1 31.0 222 186-422 402-629 (791)
291 1flg_A Protein (quinoprotein e 98.1 0.0021 7.2E-08 64.2 26.9 154 179-338 118-358 (582)
292 3sov_A LRP-6, low-density lipo 98.1 0.0023 8E-08 58.6 24.9 229 187-430 12-245 (318)
293 2xbg_A YCF48-like protein; pho 98.1 0.0067 2.3E-07 55.8 31.5 193 164-378 120-320 (327)
294 1n7d_A LDL receptor, low-densi 98.0 2.9E-05 1E-09 79.5 12.7 204 166-382 406-616 (699)
295 2p9w_A MAL S 1 allergenic prot 98.0 0.001 3.5E-08 60.1 21.0 212 163-380 10-265 (334)
296 3kya_A Putative phosphatase; s 98.0 0.0016 5.3E-08 62.9 23.3 243 167-421 140-471 (496)
297 3sre_A PON1, serum paraoxonase 98.0 0.0023 7.9E-08 59.1 23.0 206 166-378 50-296 (355)
298 3amr_A 3-phytase; beta-propell 98.0 0.0025 8.6E-08 58.1 22.6 186 179-380 41-263 (355)
299 4a0p_A LRP6, LRP-6, low-densit 97.9 0.018 6.3E-07 57.9 29.4 225 180-422 8-234 (628)
300 1n7d_A LDL receptor, low-densi 97.9 0.00017 5.7E-09 73.9 14.1 222 187-422 385-611 (699)
301 2xbg_A YCF48-like protein; pho 97.8 0.017 5.9E-07 53.0 31.7 238 165-423 79-320 (327)
302 3sre_A PON1, serum paraoxonase 97.8 0.011 3.8E-07 54.6 23.6 188 217-412 51-284 (355)
303 3s94_A LRP-6, low-density lipo 97.7 0.018 6.3E-07 57.8 26.5 229 134-382 15-245 (619)
304 3ei3_A DNA damage-binding prot 97.7 0.087 3E-06 56.9 35.8 252 165-428 553-918 (1158)
305 3das_A Putative oxidoreductase 97.6 0.038 1.3E-06 50.8 28.5 243 163-413 29-326 (347)
306 3amr_A 3-phytase; beta-propell 97.6 0.011 3.6E-07 54.0 20.6 191 130-334 43-262 (355)
307 4a0p_A LRP6, LRP-6, low-densit 97.6 0.088 3E-06 53.0 43.8 320 42-412 34-407 (628)
308 3ei3_A DNA damage-binding prot 97.5 0.17 5.9E-06 54.6 36.8 172 239-420 808-994 (1158)
309 1cru_A Protein (soluble quinop 97.5 0.089 3E-06 50.6 30.6 112 165-277 26-162 (454)
310 3ii7_A Kelch-like protein 7; p 97.4 0.03 1E-06 50.7 20.5 230 179-425 13-274 (306)
311 2vpj_A Kelch-like protein 12; 97.4 0.036 1.2E-06 50.0 20.9 230 179-425 16-280 (301)
312 2ism_A Putative oxidoreductase 97.1 0.16 5.6E-06 46.9 25.6 145 217-367 32-220 (352)
313 3a9g_A Putative uncharacterize 97.0 0.2 6.9E-06 46.4 25.6 146 216-366 29-214 (354)
314 2xzh_A Clathrin heavy chain 1; 97.0 0.18 6.2E-06 45.2 32.8 232 124-384 36-294 (365)
315 3pbp_A Nucleoporin NUP82; beta 96.9 0.12 4.1E-06 48.3 19.5 151 267-423 29-210 (452)
316 2wg3_C Hedgehog-interacting pr 96.8 0.36 1.2E-05 46.3 29.0 252 166-423 14-371 (463)
317 1zgk_A Kelch-like ECH-associat 96.7 0.085 2.9E-06 47.8 17.4 230 179-425 26-289 (308)
318 1bpo_A Protein (clathrin); cla 96.7 0.42 1.4E-05 44.8 32.3 234 124-384 35-293 (494)
319 3das_A Putative oxidoreductase 96.7 0.38 1.3E-05 44.1 28.5 259 39-320 26-326 (347)
320 2vpj_A Kelch-like protein 12; 96.6 0.13 4.3E-06 46.4 17.5 190 179-382 64-280 (301)
321 2xn4_A Kelch-like protein 2; s 96.5 0.22 7.5E-06 44.8 18.4 150 226-382 61-231 (302)
322 4asc_A Kelch repeat and BTB do 96.4 0.3 1E-05 44.2 18.7 188 180-382 7-223 (315)
323 1tl2_A L10, protein (tachylect 96.4 0.14 4.8E-06 43.2 14.6 183 229-424 5-209 (236)
324 1tl2_A L10, protein (tachylect 96.3 0.17 5.8E-06 42.7 14.4 185 179-381 5-209 (236)
325 2be1_A Serine/threonine-protei 96.2 0.38 1.3E-05 43.9 18.0 192 179-383 11-234 (339)
326 3ii7_A Kelch-like protein 7; p 96.2 0.28 9.4E-06 44.2 17.5 189 179-382 57-274 (306)
327 3pbp_A Nucleoporin NUP82; beta 96.2 0.39 1.3E-05 44.9 17.8 117 167-286 67-209 (452)
328 1xi4_A Clathrin heavy chain; a 96.2 1 3.4E-05 49.0 22.8 234 124-384 35-293 (1630)
329 1cru_A Protein (soluble quinop 96.2 0.97 3.3E-05 43.3 22.5 164 216-381 27-260 (454)
330 3ott_A Two-component system se 96.0 1.7 6E-05 44.7 28.1 230 165-422 21-259 (758)
331 2g8s_A Glucose/sorbosone dehyd 96.0 0.99 3.4E-05 41.6 21.8 148 216-366 18-214 (353)
332 4asc_A Kelch repeat and BTB do 95.8 0.75 2.5E-05 41.5 18.3 105 229-336 100-222 (315)
333 2xn4_A Kelch-like protein 2; s 95.8 0.2 7E-06 45.0 14.1 190 179-382 63-278 (302)
334 2woz_A Kelch repeat and BTB do 95.7 1.1 3.7E-05 40.5 18.8 188 180-382 18-233 (318)
335 3sbq_A Nitrous-oxide reductase 95.7 1.7 5.9E-05 42.1 21.7 242 180-423 72-408 (638)
336 2uvk_A YJHT; unknown function, 95.3 1.5 5E-05 40.3 18.8 104 226-333 65-224 (357)
337 2zwa_A Leucine carboxyl methyl 95.0 1 3.4E-05 46.0 17.6 200 179-382 399-637 (695)
338 2woz_A Kelch repeat and BTB do 95.0 2 6.8E-05 38.7 21.1 108 226-337 109-233 (318)
339 2zwa_A Leucine carboxyl methyl 94.5 2.4 8E-05 43.2 18.9 152 229-382 399-579 (695)
340 1zgk_A Kelch-like ECH-associat 94.4 0.6 2.1E-05 42.0 13.1 190 179-382 72-289 (308)
341 3s25_A Hypothetical 7-bladed b 94.3 2.5 8.7E-05 37.8 16.7 180 171-381 58-256 (302)
342 2uvk_A YJHT; unknown function, 94.1 3.5 0.00012 37.7 20.5 140 238-382 168-344 (357)
343 3sbq_A Nitrous-oxide reductase 93.9 5 0.00017 39.0 22.5 74 304-380 325-408 (638)
344 3ott_A Two-component system se 93.9 6.6 0.00023 40.3 31.1 239 166-423 324-586 (758)
345 2xzh_A Clathrin heavy chain 1; 93.1 4.7 0.00016 36.3 27.3 220 136-382 86-334 (365)
346 3q6k_A 43.2 kDa salivary prote 93.0 5.6 0.00019 36.8 19.8 143 189-335 124-306 (381)
347 3s25_A Hypothetical 7-bladed b 92.6 5.4 0.00018 35.7 18.4 173 225-422 23-213 (302)
348 4gq2_M Nucleoporin NUP120; bet 91.3 11 0.00039 39.7 18.9 38 260-297 237-274 (950)
349 2be1_A Serine/threonine-protei 91.2 5.4 0.00018 36.3 14.1 107 230-339 12-134 (339)
350 1bpo_A Protein (clathrin); cla 90.6 11 0.00039 35.4 26.9 220 136-382 85-333 (494)
351 1xi4_A Clathrin heavy chain; a 90.6 23 0.00079 38.9 21.2 226 133-382 82-333 (1630)
352 2wg3_C Hedgehog-interacting pr 89.1 4 0.00014 39.1 12.0 106 304-413 16-157 (463)
353 4hvt_A Ritya.17583.B, post-pro 88.1 24 0.00084 35.8 18.8 204 218-424 131-382 (711)
354 3b7f_A Glycosyl hydrolase, BNR 84.6 25 0.00085 32.5 23.7 151 166-320 55-251 (394)
355 1sqj_A OXG-RCBH, oligoxylogluc 72.8 90 0.0031 32.1 18.7 29 44-72 14-42 (789)
356 1sqj_A OXG-RCBH, oligoxylogluc 71.4 97 0.0033 31.9 22.7 153 165-319 14-187 (789)
357 3zwu_A Alkaline phosphatase PH 71.2 16 0.00055 36.0 9.0 59 261-319 478-548 (592)
358 4fhn_B Nucleoporin NUP120; pro 66.6 78 0.0027 34.2 14.1 37 261-297 240-276 (1139)
359 4gq2_M Nucleoporin NUP120; bet 65.6 1E+02 0.0035 32.5 14.4 38 217-255 237-274 (950)
360 4hvt_A Ritya.17583.B, post-pro 65.1 1.2E+02 0.0042 30.6 20.6 230 168-407 131-408 (711)
361 4a9v_A PHOX; hydrolase, beta-p 63.5 42 0.0014 32.8 9.9 62 259-320 476-549 (592)
362 2cn3_A Xyloglucanase, beta-1,4 52.3 2E+02 0.0069 29.1 18.1 206 216-425 23-283 (737)
363 3f7f_A Nucleoporin NUP120; nuc 45.5 34 0.0012 34.4 6.3 37 260-298 223-259 (729)
364 3qhy_B Beta-lactamase inhibito 44.5 1.6E+02 0.0054 25.6 23.3 231 136-412 41-271 (282)
365 3b7f_A Glycosyl hydrolase, BNR 42.4 2E+02 0.0068 26.2 24.8 101 179-286 23-144 (394)
366 3q6k_A 43.2 kDa salivary prote 41.0 2.2E+02 0.0074 26.2 22.8 172 239-411 124-340 (381)
367 4a9v_A PHOX; hydrolase, beta-p 40.7 1.5E+02 0.0052 29.0 9.7 61 216-277 476-549 (592)
368 3zwu_A Alkaline phosphatase PH 35.4 91 0.0031 30.7 7.5 58 351-411 478-547 (592)
369 3no0_A DNA gyrase subunit A; D 33.8 2.3E+02 0.008 24.5 19.3 119 214-334 66-198 (276)
370 4fhn_B Nucleoporin NUP120; pro 33.3 22 0.00076 38.5 3.1 38 167-205 239-276 (1139)
371 3f7f_A Nucleoporin NUP120; nuc 32.5 76 0.0026 32.0 6.4 37 217-256 223-259 (729)
372 3mez_B Mannose-specific lectin 29.1 1.6E+02 0.0056 21.2 9.1 15 305-319 59-73 (113)
373 3no0_A DNA gyrase subunit A; D 28.7 2.8E+02 0.0097 23.9 17.7 119 165-288 67-195 (276)
374 3qhy_B Beta-lactamase inhibito 26.0 3.2E+02 0.011 23.6 20.5 219 166-419 24-242 (282)
375 3hx6_A Type 4 fimbrial biogene 25.2 4.8E+02 0.017 25.4 14.2 151 271-423 86-282 (570)
376 3a0f_A Xyloglucanase; beta-pro 24.1 5.8E+02 0.02 25.9 13.2 118 166-284 21-159 (763)
377 3uc1_A DNA gyrase subunit A; D 21.2 4.4E+02 0.015 23.4 20.9 120 166-288 95-227 (327)
No 1
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.3e-48 Score=379.12 Aligned_cols=353 Identities=52% Similarity=0.973 Sum_probs=312.2
Q ss_pred CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEE
Q psy17682 113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVK 191 (490)
Q Consensus 113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~ 191 (490)
...++++|++ ..++++++.+|.|.+|++. ..++.......+.+|.+.|.+++|+| ++ .+|++|+.||+|+
T Consensus 37 ~~~~~~~~~~----~~~~~~~~~~g~i~v~~~~----~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~ 107 (402)
T 2aq5_A 37 SGFCAVNPKF----MALICEASGGGAFLVLPLG----KTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVM 107 (402)
T ss_dssp SCSEEECSSE----EEEEBCCSSSCCEEEEETT----CCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEE
T ss_pred CCcEEECCCe----EEEEEEEcCCCEEEEEECc----cCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEE
Confidence 3457777764 5667778999999999997 55555556777889999999999999 55 8999999999999
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE--ecCCCcEEEEEEcCC
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI--ECHPDIVYSASWNWD 269 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~ 269 (490)
+||+.+++.......+...+.+|...|.+++|+|+++++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|+
T Consensus 108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD 187 (402)
T ss_dssp EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT
T ss_pred EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC
Confidence 999998876555555666788899999999999998669999999999999999999999999 789999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeee-eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682 270 GSKLLTTCKDKKMRIINPRTGAIEEEA-VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS 348 (490)
Q Consensus 270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~ 348 (490)
+++|++++.||.|++||+++++.+..+ ..|.+..+..+.|+|++.+|++|.....++.|++||+++...+.......+.
T Consensus 188 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 267 (402)
T 2aq5_A 188 GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS 267 (402)
T ss_dssp SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC
Confidence 999999999999999999999998888 6777766899999999999999943336999999999987776666666777
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceE
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQ 428 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~ 428 (490)
..+..++|+|++++|+++|+.||.|++||+.++++....+..+.+..++.+++|+|++.+++++++.+++|++.++. ++
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~-~~ 346 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK-CE 346 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE-EE
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCc-EE
Confidence 88999999999999977888899999999999987666777777778999999999999999999999999999987 99
Q ss_pred EEEEEEeCCCcCcccCCCCCCCCCCCccchhhhcCCCCCCCcccCCC
Q psy17682 429 VVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPD 475 (490)
Q Consensus 429 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (490)
++.+.+||+.+.|+.+++|+.....+.+++++|+.|.++.++.++..
T Consensus 347 ~i~~~~pr~~~~f~~d~~p~~~~~~~~~sa~~w~~g~~~~~~~~s~~ 393 (402)
T 2aq5_A 347 PIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLK 393 (402)
T ss_dssp EEEEECCCCCSSCCTTTCCCEECSSCSBCHHHHHTTCCCCCCEECCS
T ss_pred EEEEEcccchhhcccccCCCCCCCCcccCHHHHhCCCCCCceEEecC
Confidence 99999999999999999999999999999999999999988866554
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.7e-45 Score=370.70 Aligned_cols=379 Identities=11% Similarity=0.116 Sum_probs=280.5
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCC--CCC--cccc--ceecccccee
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPP--SEK--SKSA--LKVTKRSNVL 98 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~--~~~--~~~~--~~~~~~~~~~ 98 (490)
+..++.. .......+.||.+.|++++|+|++ .+||||+.|++|+|||+.++.... ... ...+ +.+......+
T Consensus 41 v~l~~~~-~~~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l 118 (611)
T 1nr0_A 41 VYTVPVG-SLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRI 118 (611)
T ss_dssp EEEEETT-CSSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred EEEecCC-CcccCeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEE
Confidence 3445543 245667899999999999999999 999999999999999987543110 000 0011 1111111111
Q ss_pred ecccC-----------------CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee
Q psy17682 99 DKVGG-----------------KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV 161 (490)
Q Consensus 99 ~~~~~-----------------~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~ 161 (490)
...+. ..-..+...+++++|+|+.. ..+++++.++.+++|+.. .+ +....+
T Consensus 119 ~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~----~~l~s~s~D~~v~lwd~~-----~~---~~~~~l 186 (611)
T 1nr0_A 119 AAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRP----FRIISGSDDNTVAIFEGP-----PF---KFKSTF 186 (611)
T ss_dssp EEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSS----CEEEEEETTSCEEEEETT-----TB---EEEEEE
T ss_pred EEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCC----eEEEEEeCCCeEEEEECC-----CC---eEeeee
Confidence 10000 00123445788999999851 247789999999999874 22 245678
Q ss_pred ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
.+|.+.|.+++|+|++ .+|++|+.|++|++||+.+++....+........+|...|.+++|+|++. +|++++.|++|+
T Consensus 187 ~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~ 264 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIK 264 (611)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred ccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEE
Confidence 8999999999999998 89999999999999999988776554221111226999999999999995 999999999999
Q ss_pred EEECCCCeeEEE-------------------------------------------EecCCCcEEEEEEcCCCCEEEEEeC
Q psy17682 242 IWNVGTGEIMIQ-------------------------------------------IECHPDIVYSASWNWDGSKLLTTCK 278 (490)
Q Consensus 242 iwd~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~ 278 (490)
+||+++++.+.. +.+|...|.+++|+|++++|++++.
T Consensus 265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 999988765433 3468899999999999999999999
Q ss_pred CCeEEEEeCCCCceeeeee-ec----------------------------------------------------------
Q psy17682 279 DKKMRIINPRTGAIEEEAV-CH---------------------------------------------------------- 299 (490)
Q Consensus 279 dg~i~iwd~~~~~~~~~~~-~~---------------------------------------------------------- 299 (490)
|++|++||+.+++....+. .|
T Consensus 345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 424 (611)
T 1nr0_A 345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 424 (611)
T ss_dssp TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence 9999999998765432210 00
Q ss_pred ----------------------CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682 300 ----------------------EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD 357 (490)
Q Consensus 300 ----------------------~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 357 (490)
....+.+++|+|+|++|++|+ .|+.|++||+..... .......|...|.+++|+
T Consensus 425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs---~D~~v~lwd~~~~~~-~~~~~~~h~~~v~~v~fs 500 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG---QDSKVHVYKLSGASV-SEVKTIVHPAEITSVAFS 500 (611)
T ss_dssp CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE---TTSEEEEEEEETTEE-EEEEEEECSSCEEEEEEC
T ss_pred EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC---CCCeEEEEEccCCce-eeeeccCCCCceEEEEEC
Confidence 011257889999999999999 789999999976432 112225677889999999
Q ss_pred CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
|+|++| ++++.|+.|++|++.++...... ..+. |...|.+++|+||+++++++ ++.+++|++..+.
T Consensus 501 pdg~~l-as~s~d~~v~~w~~~~~~~~~~~-~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 501 NNGAFL-VATDQSRKVIPYSVANNFELAHT-NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp TTSSEE-EEEETTSCEEEEEGGGTTEESCC-CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CCCCEE-EEEcCCCCEEEEEcCCCCceeee-eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 999998 78999999999999873212111 0123 66789999999999999987 4589999998765
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-43 Score=344.92 Aligned_cols=288 Identities=18% Similarity=0.260 Sum_probs=250.6
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
....+.||.+.|++++|+|++ .+|+||+.||+|+|||+.++..
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~------------------------------------ 142 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF------------------------------------ 142 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCC------------------------------------
T ss_pred ceEeecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE------------------------------------
Confidence 356789999999999999999 8999999999999999987541
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~ 195 (490)
...+.+|.+.|.+++|+|++ .+|++|+.|++|++||+
T Consensus 143 ------------------------------------------~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 143 ------------------------------------------ERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDF 179 (410)
T ss_dssp ------------------------------------------CEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEET
T ss_pred ------------------------------------------EEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeC
Confidence 12456899999999999988 89999999999999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT 275 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 275 (490)
.+++++.. +.+|...|.+++|+|++. +|++|+.|++|++||+++++++..+.+|...|.++.++|++++|++
T Consensus 180 ~~~~~~~~-------~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 180 QGFECIRT-------MHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp TSSCEEEC-------CCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCCceeEE-------EcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 88776554 456999999999999985 9999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC--------------------CcEEEEEeCCCceeEEEEecCCC
Q psy17682 276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS--------------------GLIFTTGFSKMSERQYSLRAPDH 335 (490)
Q Consensus 276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------~~~l~~~~~~~~~~~i~iwd~~~ 335 (490)
++.|++|++||++++++...+..|... +.+++|+|+ |.+|++|+ .|+.|++||+++
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs---~D~~i~iwd~~~ 327 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS---RDKTIKMWDVST 327 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE---TTSEEEEEETTT
T ss_pred EcCCCeEEEEECCCCceeeEecCCCce-EEEEEEcCcccccchhhhccccccccCCCCCEEEEEe---CCCeEEEEECCC
Confidence 999999999999999999988888875 999999996 66899998 789999999998
Q ss_pred CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--c
Q psy17682 336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--C 413 (490)
Q Consensus 336 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~ 413 (490)
+.....+ ..|...|.+++|+|+|++| ++|+.|+.|++||+.+++.. ..+. .|...|++++|+|++.+++++ +
T Consensus 328 ~~~~~~~--~~h~~~v~~v~~~~~g~~l-~s~s~D~~i~vwd~~~~~~~-~~~~--~h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 328 GMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCM-KTLN--AHEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp TEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCC-EEEE--CCSSCEEEEEECSSSSCEEEEETT
T ss_pred CceEEEE--ECCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceE-EEEc--CCCCcEEEEEEcCCCCEEEEEeCC
Confidence 6543322 3577789999999999998 78999999999999988733 2222 355789999999999988887 4
Q ss_pred ceeEEEEe
Q psy17682 414 EIGRFFRL 421 (490)
Q Consensus 414 ~~~~~~~~ 421 (490)
+.+++|++
T Consensus 402 ~~i~vW~~ 409 (410)
T 1vyh_C 402 QTVKVWEC 409 (410)
T ss_dssp SEEEEEC-
T ss_pred CcEEEEeC
Confidence 57888875
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-43 Score=333.33 Aligned_cols=294 Identities=15% Similarity=0.195 Sum_probs=248.6
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
.....+|.||.+.|++++|+|++ .+|+||+.||+|++||..++.
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~----------------------------------- 88 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTN----------------------------------- 88 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCC-----------------------------------
T ss_pred chhheeecCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCC-----------------------------------
Confidence 45567899999999999999999 899999999999999987643
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
....+..|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 89 -------------------------------------------~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw 124 (340)
T 1got_B 89 -------------------------------------------KVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIY 124 (340)
T ss_dssp -------------------------------------------EEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEE
T ss_pred -------------------------------------------cceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEE
Confidence 011345688899999999988 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
++.+..... .....+.+|...|.++.|++++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|
T Consensus 125 ~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 125 NLKTREGNV---RVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp ETTTCSBSC---EEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ECccCCCcc---eeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence 998764321 1233467799999999999986 58999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF 353 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 353 (490)
++++.|++|++||++++++...+.+|... +.+++|+|++.+|++|+ .|+.|++||++............+...|.+
T Consensus 200 ~sg~~d~~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 200 VSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNGNAFATGS---DDATCRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEEeCCCcEEEEECCCCeeEEEEcCCcCC-EEEEEEcCCCCEEEEEc---CCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence 99999999999999999999999888875 99999999999999998 789999999987653222222223346999
Q ss_pred eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682 354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR 420 (490)
Q Consensus 354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~ 420 (490)
++|+|+|++| ++|+.|+.|++||+.+++.. ..+ ..|..+|.+++|+|++.++++++ +.+++|+
T Consensus 276 ~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~-~~~--~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSKSGRLL-LAGYDDFNCNVWDALKADRA-GVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSEE-EEEETTSEEEEEETTTCCEE-EEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCCEE-EEECCCCeEEEEEcccCcEe-eEe--ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999998 78999999999999988732 222 24567999999999999988874 4778884
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-42 Score=323.56 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=241.9
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
....+|.+|.+.|++++|+|++ .+|+||+.||+|++||+.++.
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~------------------------------------ 46 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV------------------------------------ 46 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE------------------------------------
T ss_pred eeEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc------------------------------------
Confidence 4567899999999999999999 899999999999999987643
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
....+.+|..+|.+++|+|++ ++|++|+.|++|++||
T Consensus 47 ------------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 47 ------------------------------------------EVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFN 83 (304)
T ss_dssp ------------------------------------------EEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEE
T ss_pred ------------------------------------------eeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEE
Confidence 011345788999999999988 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEcC-CCCE
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWNW-DGSK 272 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~ 272 (490)
+.+++.+.. +.+|...|.+++|+|+++ +|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..
T Consensus 84 ~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 84 YNTGEKVVD-------FEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp TTTCCEEEE-------EECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred CCCCcEEEE-------EeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 998876554 556999999999999985 9999999999999999877 45667889999999999999 6789
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682 273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG 350 (490)
Q Consensus 273 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~ 350 (490)
|++|+.|++|++||++++.....+..+....+..+.|+| ++.+|++|+ .|+.|++||+++..+...+ ..|...
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s---~D~~i~iWd~~~~~~~~~~--~~h~~~ 230 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---DDLTIKIWDYQTKSCVATL--EGHMSN 230 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE---TTSEEEEEETTTTEEEEEE--ECCSSC
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc---CCCeEEEEeCCCCccceee--CCCCCC
Confidence 999999999999999988877666644434588888886 678999998 7999999999986543322 357788
Q ss_pred eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCce--eEEeec-ceeEEEEecC
Q psy17682 351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRG--CDVNSC-EIGRFFRLNN 423 (490)
Q Consensus 351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~--~l~~~~-~~~~~~~~~~ 423 (490)
|..++|+|++++| ++|+.||.|++||+.+++ .+..+. +...+.+++|+|++. +++++. +...+|.+..
T Consensus 231 v~~~~~~p~~~~l-~s~s~Dg~i~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 231 VSFAVFHPTLPII-ISGSEDGTLKIWNSSTYK----VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEEEECSSSSEE-EEEETTSCEEEEETTTCC----EEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEEEECCCCCEE-EEEcCCCeEEEEECCCCc----eeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999988 899999999999999987 222333 446899999999874 466664 4556777654
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=330.21 Aligned_cols=293 Identities=14% Similarity=0.179 Sum_probs=247.0
Q ss_pred CCcEEecccccceeeeEEeccCC---CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTA---QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN 110 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~---~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (490)
......+.+|.+.|++++|+|++ ..+|+|||.|++|+||++..+..
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~------------------------------- 70 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL------------------------------- 70 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------------------------------
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------------------------------
Confidence 34456688999999999999863 26899999999999999865320
Q ss_pred ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682 111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV 190 (490)
Q Consensus 111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i 190 (490)
. ....+.+|...|.+++|+|++ .++++++.|++|
T Consensus 71 -----------------~----------------------------~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i 104 (321)
T 3ow8_A 71 -----------------D----------------------------LQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHI 104 (321)
T ss_dssp -----------------E----------------------------EEEEECCCSSCEEEEEECSSS-SEEEEEETTSEE
T ss_pred -----------------e----------------------------eeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcE
Confidence 0 011346899999999999988 899999999999
Q ss_pred EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682 191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG 270 (490)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (490)
++||+.+++.+.. +..|...+.+++|+|+++ +|++|+.|+.|++||+++++....+..|...|.+++|+|++
T Consensus 105 ~lWd~~~~~~~~~-------~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 105 RLWDLENGKQIKS-------IDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp EEEETTTTEEEEE-------EECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred EEEECCCCCEEEE-------EeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence 9999998876554 345788899999999995 99999999999999999999999999899999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG 350 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~ 350 (490)
++|++++.||.|++||+++++.+..+.+|... +.+++|+|++++|++|+ .|+.|++||++..... .....|...
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s---~dg~i~iwd~~~~~~~--~~~~~h~~~ 250 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTAS---DDGYIKIYDVQHANLA--GTLSGHASW 250 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEEC---TTSCEEEEETTTCCEE--EEECCCSSC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEc---CCCeEEEEECCCccee--EEEcCCCCc
Confidence 99999999999999999999999999888775 99999999999999998 6899999999876532 223357778
Q ss_pred eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEe
Q psy17682 351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRL 421 (490)
Q Consensus 351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~ 421 (490)
|.+++|+|++++| ++|+.|+.|++||+.+++.+. .+ ..+...|.+++|+|++.++++++ +.+++|+.
T Consensus 251 v~~~~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~-~~--~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 251 VLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCVH-TF--FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEE-EE--CCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred eEEEEECCCCCEE-EEEeCCCcEEEEeCCCCEEEE-EE--cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999998 789999999999999886322 22 24567899999999999888774 47888885
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.6e-43 Score=356.35 Aligned_cols=339 Identities=12% Similarity=0.154 Sum_probs=263.5
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
....+.+|.+.|++++|+|+++..|+||+.|++|++||...++ ....+. .+...|.+
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~------------------~~~~l~-----~H~~~V~~ 195 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK------------------FKSTFG-----EHTKFVHS 195 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE------------------EEEEEC-----CCSSCEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe------------------Eeeeec-----cccCceEE
Confidence 4456899999999999999986679999999999999976532 111111 13446899
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-------ecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-------GGHKGPVLDIAWSPHDDNVIASGSEDC 188 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-------~~h~~~V~~~~~~p~~~~~l~s~~~dg 188 (490)
++|+|+. ..+++++.|+.+++|+.. .++ ....+ .+|.+.|.+++|+|++ .+|++++.|+
T Consensus 196 v~fspdg-----~~las~s~D~~i~lwd~~-----~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~ 261 (611)
T 1nr0_A 196 VRYNPDG-----SLFASTGGDGTIVLYNGV-----DGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADK 261 (611)
T ss_dssp EEECTTS-----SEEEEEETTSCEEEEETT-----TCC---EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTS
T ss_pred EEECCCC-----CEEEEEECCCcEEEEECC-----CCc---EeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCC
Confidence 9999985 367889999999999975 121 12222 2899999999999998 8999999999
Q ss_pred cEEEEECCCCCccccccc------------------------------------ceeeecccccCEEEEEEeeCCCCEEE
Q psy17682 189 VVKVWQIPDGGISRTLTE------------------------------------PVVDLLYHQRRVGLVLWHPTAQNVLL 232 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~------------------------------------~~~~~~~~~~~v~~~~~~p~~~~~l~ 232 (490)
+|++||+.+++....+.. +...+.+|...|++++|+|+++ +|+
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~ 340 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLF 340 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEE
Confidence 999999998776544321 2234568999999999999995 999
Q ss_pred EEeCCCcEEEEECCCCeeEEEE-e--------------------------------------------------------
Q psy17682 233 TAGSDNNVAIWNVGTGEIMIQI-E-------------------------------------------------------- 255 (490)
Q Consensus 233 s~~~dg~v~iwd~~~~~~~~~~-~-------------------------------------------------------- 255 (490)
+++.|+.|++||+.+++....+ .
T Consensus 341 s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s 420 (611)
T 1nr0_A 341 SADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVS 420 (611)
T ss_dssp EEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEEC
T ss_pred EEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEe
Confidence 9999999999998765432211 0
Q ss_pred -------------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEE
Q psy17682 256 -------------------------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAI 308 (490)
Q Consensus 256 -------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 308 (490)
.|...+.+++|+|+|++|++|+.|++|++||+.++.. ... ..|... +.+++
T Consensus 421 ~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~-v~~v~ 498 (611)
T 1nr0_A 421 ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAE-ITSVA 498 (611)
T ss_dssp TTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSC-EEEEE
T ss_pred CCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCc-eEEEE
Confidence 1234578899999999999999999999999987653 233 466664 99999
Q ss_pred EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee-E
Q psy17682 309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV-H 386 (490)
Q Consensus 309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~-~ 386 (490)
|+|+|++|++++ .|+.|++|++.+.......... .|...|.+++|+|||++| ++|+.|++|++|++.+++... .
T Consensus 499 fspdg~~las~s---~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~l-asgs~D~~v~lW~~~~~~~~~~~ 574 (611)
T 1nr0_A 499 FSNNGAFLVATD---QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL-ATGSLDNSVIVWNMNKPSDHPII 574 (611)
T ss_dssp ECTTSSEEEEEE---TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCTTSCCEE
T ss_pred ECCCCCEEEEEc---CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEE-EEEECCCcEEEEECCCcccccch
Confidence 999999999998 7899999999862221111112 377889999999999998 899999999999998865322 2
Q ss_pred EeeeeeC-CCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682 387 YINTFQT-PDPQRGIGMMPKRGCDVNS--CEIGRFFRL 421 (490)
Q Consensus 387 ~~~~~~~-~~~i~~~~~sp~~~~l~~~--~~~~~~~~~ 421 (490)
.+ ..| ...|.+++|+|++. ++++ ++.+++|++
T Consensus 575 ~~--~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 575 IK--GAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp ET--TSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred hh--ccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 22 234 47899999999999 6655 458899987
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-42 Score=328.48 Aligned_cols=297 Identities=16% Similarity=0.199 Sum_probs=247.8
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
......|.||.+.|++++|+|++ .+|+|||.||+|++||..++..
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~---------------------------------- 98 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNK---------------------------------- 98 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE----------------------------------
T ss_pred cEEEEEecCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCc----------------------------------
Confidence 35677899999999999999999 8999999999999999876430
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
...+..|...|.+++|+|++ .++++|+.|+.+++|
T Consensus 99 --------------------------------------------~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 99 --------------------------------------------EHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVY 133 (354)
T ss_dssp --------------------------------------------EEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEE
T ss_pred --------------------------------------------ceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEE
Confidence 01234577889999999998 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC--CCC
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW--DGS 271 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 271 (490)
++........ ......+.+|...|.+++|+|++. .|++++.|++|++||+++++.+..+.+|...|.+++|+| +++
T Consensus 134 ~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 134 PLTFDKNENM-AAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp ECCCCTTCCS-GGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEeccccccc-cccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9875432211 123345667999999999999985 899999999999999999999999999999999999988 568
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCce
Q psy17682 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV 351 (490)
Q Consensus 272 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i 351 (490)
+|++++.||+|++||+++++++..+..|... +.+++|+|++.+|++|+ .|+.|++||++............+...+
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSGDAFASGS---DDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 9999999999999999999999999888875 99999999999999998 6899999999876432222222233468
Q ss_pred eeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682 352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR 420 (490)
Q Consensus 352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~ 420 (490)
.+++|+|++++| ++|+.|+.|++||+.+++.+ ..+ ..|...|.+++|+|++.++++++ +.+++|+
T Consensus 288 ~~~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~-~~l--~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 288 SSVDFSLSGRLL-FAGYNDYTINVWDVLKGSRV-SIL--FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSSEE-EEEETTSCEEEEETTTCSEE-EEE--CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEEeCCCCEE-EEEECCCcEEEEECCCCceE-EEE--ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 899999999998 78999999999999988732 222 24667999999999999998884 4677773
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=333.58 Aligned_cols=304 Identities=12% Similarity=0.139 Sum_probs=236.7
Q ss_pred cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
...|...|.+++|+|+| .+|++++ |+++++||.....+...... ....... ........|.+++|+
T Consensus 26 ~~~~~~~v~~~~fs~dG-~~l~~~s-d~~~r~Wd~~~~~~~~~~~~------~~~~~~~------~~~~~~~~v~~~~~s 91 (344)
T 4gqb_B 26 PACMERQLEAARYRSDG-ALLLGAS-SLSGRCWAGSLWLFKDPCAA------PNEGFCS------AGVQTEAGVADLTWV 91 (344)
T ss_dssp CSSCCSEEEEEEECTTS-CEEEEEE-CCSSSCCCEEEEEESSGGGT------TCGGGCS------EEEEESSCEEEEEEE
T ss_pred cccccCCEEEEEECCCC-CEEEEEe-CCceEEeeceeeeecccccc------CCcceee------eeeccCCCEEEEEEe
Confidence 35688889999999999 7888777 78889987432110000000 0000000 001123358899999
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
|+. .+++++.+|.|++|++. ...........+.+|.+.|++++|+|+| ++|++|+.|++|++||+++++
T Consensus 92 ~d~------~l~~~s~dg~v~lWd~~----~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 92 GER------GILVASDSGAVELWELD----ENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp TTT------EEEEEETTSEEEEEEEC----TTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE
T ss_pred CCC------eEEEEECCCEEEEEecc----CCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 984 46688999999999985 2211111223456899999999999998 899999999999999999886
Q ss_pred cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCC-CCEEEEE
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWD-GSKLLTT 276 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~ 276 (490)
.+.. +.+|...|.+++|+|++..+|++++.|++|++||+++++....+. .+...+.+++|+|+ +++|++|
T Consensus 161 ~~~~-------~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 161 VLSS-------YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EEEE-------ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EEEE-------EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 6554 557999999999999987789999999999999999999888774 45667999999995 5688999
Q ss_pred eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682 277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL 355 (490)
Q Consensus 277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 355 (490)
+.||+|++||+++++++.++.+|... +.+++|+|++ ++|++|+ .|+.|++||+.+++ ......|...|.+++
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~fsp~g~~~lasgs---~D~~i~vwd~~~~~---~~~~~~H~~~V~~v~ 306 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQC-VTGLVFSPHSVPFLASLS---EDCSLAVLDSSLSE---LFRSQAHRDFVRDAT 306 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSC-EEEEEECSSSSCCEEEEE---TTSCEEEECTTCCE---EEEECCCSSCEEEEE
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCeEEEEEe---CCCeEEEEECCCCc---EEEEcCCCCCEEEEE
Confidence 99999999999999999999999876 9999999997 5788888 68999999998764 334457888899999
Q ss_pred ecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 356 YDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
|+|+++.++++|+.|++|++|++.+..
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999877899999999999998753
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.7e-43 Score=335.48 Aligned_cols=312 Identities=16% Similarity=0.188 Sum_probs=254.8
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
....+|.||.+.|++++|+|++ .+|+||+.|++|+|||+.++.. ...+. .+...+.
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~------------------~~~~~-----~h~~~v~ 112 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQK------------------THAIK-----LHCPWVM 112 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEE------------------EEEEE-----CCCTTCC
T ss_pred EEeecccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcc------------------ceEEe-----cCCCCEE
Confidence 4567799999999999999999 8999999999999999987541 11111 1233588
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
+++|+|+. ..+++++.++.+++|++.......+. ......+.+|.+.|.++.|+|+++..|++|+.|++|++||
T Consensus 113 ~~~~s~~g-----~~las~~~d~~v~iw~~~~~~~~~~~-~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd 186 (380)
T 3iz6_a 113 ECAFAPNG-----QSVACGGLDSACSIFNLSSQADRDGN-MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD 186 (380)
T ss_dssp CCEECTTS-----SEEEECCSSSCCEEEECCCCSSCCCS-STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred EEEECCCC-----CEEEEeeCCCcEEEEECCCCccccCC-ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence 99999995 46788999999999998633222221 2345567899999999999998767899999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC-CCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-TGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
+.+++.+..+... ...+|...|.+++|++.+.++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++++|
T Consensus 187 ~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 264 (380)
T 3iz6_a 187 VTTGQRISIFGSE--FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF 264 (380)
T ss_dssp TTTCCEEEEECCC--SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE
T ss_pred cCCCcEEEEeecc--cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE
Confidence 9998876544211 1246899999999988444699999999999999998 457788899999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCC------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe--c
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEG------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE--L 345 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~--~ 345 (490)
++++.||+|++||+++++.+..+..+.. ..+.+++|+|+|++|++|+ .++.|++||....+....... .
T Consensus 265 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~---~dg~i~vwd~~~~~~~~~~~~~~~ 341 (380)
T 3iz6_a 265 GTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY---SNGDCYVWDTLLAEMVLNLGTLQN 341 (380)
T ss_dssp EEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC---TTSCEEEEETTTCCEEEEECCSCS
T ss_pred EEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE---CCCCEEEEECCCCceEEEEecccC
Confidence 9999999999999999988877764322 2378999999999999998 689999999987664333321 3
Q ss_pred cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
.|...|.+++|+|+|++| ++|+.|+.|++|++...+
T Consensus 342 ~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCSSS
T ss_pred CCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCCCc
Confidence 577789999999999998 899999999999998765
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-42 Score=322.97 Aligned_cols=298 Identities=15% Similarity=0.179 Sum_probs=244.4
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
....+|.||.+.|++++|+|.+..+|+|||.|++|++|++..... .
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-----------------~----------------- 53 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-----------------K----------------- 53 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-----------------E-----------------
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-----------------c-----------------
Confidence 345679999999999999998778999999999999999864220 0
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
.......+.+|...|.+++|+|++ .+|++|+.|++|++||
T Consensus 54 ---------------------------------------~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 54 ---------------------------------------FGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWD 93 (319)
T ss_dssp ---------------------------------------EEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred ---------------------------------------ccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEE
Confidence 000123567999999999999998 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC-----
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD----- 269 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----- 269 (490)
+.+++.... +.+|...|.+++|+|++. +|++|+.|++|++||++ ++.+..+.+|...|.+++|+|.
T Consensus 94 ~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 94 VATGETYQR-------FVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp TTTTEEEEE-------EECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred CCCCCeeEE-------EccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 998866544 556999999999999985 99999999999999996 5677788899999999999985
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682 270 -GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS 348 (490)
Q Consensus 270 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~ 348 (490)
+..+++++.|+.|++||+++.+....+.+|... +.+++|+|+|++|++|+ .|+.|++||+.+.+. .....+.
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~sp~g~~l~s~~---~dg~i~iwd~~~~~~---~~~~~~~ 237 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN-INTLTASPDGTLIASAG---KDGEIMLWNLAAKKA---MYTLSAQ 237 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC-EEEEEECTTSSEEEEEE---TTCEEEEEETTTTEE---EEEEECC
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCc-EEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcE---EEEecCC
Confidence 448999999999999999999988888888875 99999999999999998 789999999997653 3333455
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-----eCCCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-----QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRL 421 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~ 421 (490)
..+.+++|+|++.++ ++++ ++.+++|++............+ .+...+.+++|+|+|++++++ ++.+++|++
T Consensus 238 ~~v~~~~~sp~~~~l-a~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 238 DEVFSLAFSPNRYWL-AAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp SCEEEEEECSSSSEE-EEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CcEEEEEEcCCCCEE-EEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 789999999999998 5555 4559999998764221111111 123568999999999999887 457899998
Q ss_pred cCC
Q psy17682 422 NNS 424 (490)
Q Consensus 422 ~~~ 424 (490)
.+.
T Consensus 316 ~t~ 318 (319)
T 3frx_A 316 MTA 318 (319)
T ss_dssp EEC
T ss_pred eec
Confidence 764
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-42 Score=329.54 Aligned_cols=301 Identities=15% Similarity=0.200 Sum_probs=233.9
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeC------CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcc
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGK------EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANR 109 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~------D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (490)
|.....+|.+.|++++|+|+| .+|+|||. |+.|++|+..++..... ..... ...
T Consensus 34 p~~~p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~~-------------~~~~~------~~~ 93 (357)
T 4g56_B 34 PVTAPACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNES-------------LCTAG------VQT 93 (357)
T ss_dssp ------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CGG-------------GCSEE------EEC
T ss_pred CCCCcccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCccee-------------Eeccc------CCC
Confidence 344557899999999999999 89999998 67899998877542110 00000 112
Q ss_pred cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682 110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189 (490)
Q Consensus 110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~ 189 (490)
...|.+++|+|+. .+++++.+|.|++|++. .............+|.+.|.+++|+|++ ++|++|+.|++
T Consensus 94 ~~~V~~~~~s~d~------~~l~~s~dg~v~lWd~~----~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~ 162 (357)
T 4g56_B 94 EAGVTDVAWVSEK------GILVASDSGAVELWEIL----EKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFS 162 (357)
T ss_dssp SSCEEEEEEETTT------EEEEEETTSCEEEC------------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSC
T ss_pred CCCEEEEEEcCCC------CEEEEECCCEEEEeecc----ccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCe
Confidence 3358899999985 34457789999999985 2222222223456899999999999998 89999999999
Q ss_pred EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEc
Q psy17682 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWN 267 (490)
Q Consensus 190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~ 267 (490)
|++||+++++.+.. +.+|...|++++|+|+++.++++++.|+.|++||+++++++..+. .+...+.+++|+
T Consensus 163 v~iwd~~~~~~~~~-------~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 163 VKVWDLSQKAVLKS-------YNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp EEEEETTTTEEEEE-------ECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred EEEEECCCCcEEEE-------EcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence 99999988866554 456999999999999987789999999999999999988766554 567789999999
Q ss_pred CCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682 268 WDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL 345 (490)
Q Consensus 268 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~ 345 (490)
|++ .+|++|+.|+.|++||+++++++..+..|... +.+++|+|++ ++|++|+ .|+.|+|||+++++ .....
T Consensus 236 p~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~~lasgs---~D~~i~iwd~~~~~---~~~~~ 308 (357)
T 4g56_B 236 PEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN-ITGLAYSYHSSPFLASIS---EDCTVAVLDADFSE---VFRDL 308 (357)
T ss_dssp TTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC-EEEEEECSSSSCCEEEEE---TTSCEEEECTTSCE---EEEEC
T ss_pred hcccceEEEeecccceeEEECCCCcEeEEEecccee-EEEEEEcCCCCCEEEEEe---CCCEEEEEECCCCc---EeEEC
Confidence 974 68899999999999999999999999888875 9999999997 5788888 68999999998764 34455
Q ss_pred cCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCC
Q psy17682 346 DTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 346 ~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
.|...|.+++|+| ++++| ++++.||.|++|++....
T Consensus 309 ~H~~~V~~vafsP~d~~~l-~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 309 SHRDFVTGVAWSPLDHSKF-TTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp CCSSCEEEEEECSSSTTEE-EEEETTSCEEEEECC---
T ss_pred CCCCCEEEEEEeCCCCCEE-EEEcCCCeEEEEECCCCC
Confidence 7888999999999 67777 899999999999997654
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.2e-41 Score=313.96 Aligned_cols=292 Identities=18% Similarity=0.310 Sum_probs=242.8
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
..+..++.||.+.|++++|+|++ .+|++|+.||.|++|++.++..
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~---------------------------------- 57 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKF---------------------------------- 57 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE----------------------------------
T ss_pred ceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCccc----------------------------------
Confidence 45567899999999999999999 8999999999999999876430
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
...+.+|...|.+++|+|++ ++|++|+.|+.|++|
T Consensus 58 --------------------------------------------~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 58 --------------------------------------------EKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIW 92 (312)
T ss_dssp --------------------------------------------EEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred --------------------------------------------chhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEE
Confidence 11345789999999999988 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
|+++++.+.. +.+|...|.+++|+|++. +|++|+.|+.|++||+++++.+..+..|...|.+++|+|++++|
T Consensus 93 d~~~~~~~~~-------~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 93 DVSSGKCLKT-------LKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp ETTTCCEEEE-------EECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ECCCCcEEEE-------EcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 9998876554 456999999999999985 99999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc--e
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG--V 351 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~--i 351 (490)
++++.||.|++||+++++.+..+..+....+..++|+|++++|++++ .++.|++||+++.+...... .+... .
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~--~~~~~~~~ 239 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKCLKTYT--GHKNEKYC 239 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEEEEEEC--SSCCSSSC
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEE--ecCCceEE
Confidence 99999999999999999888877655555699999999999999998 68999999998765332222 23222 2
Q ss_pred eeeeec-CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee----cceeEEEEec
Q psy17682 352 MFPLYD-PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS----CEIGRFFRLN 422 (490)
Q Consensus 352 ~~~~~s-~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~----~~~~~~~~~~ 422 (490)
....++ +++++| ++|+.||.|++||+.+++. ...+. .+...|.+++|+|++.+++++ ++.+++|+.+
T Consensus 240 ~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~-~~~~~--~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 240 IFANFSVTGGKWI-VSGSEDNLVYIWNLQTKEI-VQKLQ--GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCEEEECSSSCEE-EECCTTSCEEEEETTTCCE-EEEEC--CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEEeCCCcEE-EEECCCCEEEEEECCCchh-hhhhh--ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 233444 566666 8999999999999998872 22222 355789999999999988876 4578999864
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=321.71 Aligned_cols=303 Identities=17% Similarity=0.239 Sum_probs=240.8
Q ss_pred CcEEecccccc-eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 35 EPVVDLLYHQR-RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 35 ~~~~~l~gH~~-~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
..+..+.+|.+ .|.+++|+|++ .+|+|||.|++|+|||+.++.. ..
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~------------------~~-------------- 52 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSW------------------IC-------------- 52 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEE------------------EE--------------
T ss_pred EEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcc------------------ee--------------
Confidence 45678899998 99999999999 8999999999999999875320 00
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
......+|.+.|.+++|+|++ ++|++|+.|++|++|
T Consensus 53 -------------------------------------------~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 53 -------------------------------------------KSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIW 88 (345)
T ss_dssp -------------------------------------------EEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred -------------------------------------------eeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEE
Confidence 000124799999999999998 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCC
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDG 270 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~ 270 (490)
++..+... ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++ .+..+.+|...|.+++|+|++
T Consensus 89 ~~~~~~~~-----~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 89 KKNQDDFE-----CVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EECCC-EE-----EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred EccCCCeE-----EEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 98766421 2334677999999999999985 99999999999999998763 456677899999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--------
Q psy17682 271 SKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-------- 340 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-------- 340 (490)
++|++++.|++|++||.++++ +..++.+|... +.+++|+|+|++|++|+ .|+.|++|+........
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~-v~~l~~sp~g~~l~s~s---~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHEST-VWSLAFDPSGQRLASCS---DDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEEEECTTCTTCCCCC---
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc-eEEEEECCCCCEEEEEe---CCCeEEEeccccCCCCccceeeccC
Confidence 999999999999999998875 34567788775 99999999999999998 78999999964322110
Q ss_pred ----EE--EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC----eeEEee-e-eeCCCceeeEEEeeCce-
Q psy17682 341 ----VM--VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP----FVHYIN-T-FQTPDPQRGIGMMPKRG- 407 (490)
Q Consensus 341 ----~~--~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~----~~~~~~-~-~~~~~~i~~~~~sp~~~- 407 (490)
.. ....|...|.+++|+|++..| ++++.|+.|++|+...... ...... . ..|...|++++|+|++.
T Consensus 239 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 239 PSWKCICTLSGFHSRTIYDIAWCQLTGAL-ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp CEEEEEEEECSSCSSCEEEEEECTTTCCE-EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred CccceeEEecCCCCCcEEEEEEecCCCEE-EEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 11 111266779999999999998 7899999999999976531 111111 1 13567899999999974
Q ss_pred eEEee--cceeEEEEecCCC
Q psy17682 408 CDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 408 ~l~~~--~~~~~~~~~~~~~ 425 (490)
+++++ ++.+++|++...+
T Consensus 318 ~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEEETTSCEEEEEECC--
T ss_pred EEEEcCCCCcEEEEEecCCC
Confidence 77766 5589999998876
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-40 Score=314.57 Aligned_cols=299 Identities=17% Similarity=0.197 Sum_probs=237.2
Q ss_pred CcEEecccccceeeeEEe-----cc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCc
Q psy17682 35 EPVVDLLYHQRRVGLVLW-----HP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGAN 108 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~-----~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (490)
.....|.||.+.|++++| +| ++ .+|+|||.|++|++||+..+....
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~--------------------------- 63 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNG--------------------------- 63 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSS---------------------------
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCccc---------------------------
Confidence 345679999999999999 77 55 899999999999999987643100
Q ss_pred ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC 188 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg 188 (490)
........+.+|...|.+++|+|++ .++++|+.|+
T Consensus 64 --------------------------------------------~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~ 98 (343)
T 2xzm_R 64 --------------------------------------------YFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDK 98 (343)
T ss_dssp --------------------------------------------BSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTS
T ss_pred --------------------------------------------ccccccchhccCCCceEEEEECCCC-CEEEEEcCCC
Confidence 0000122457899999999999988 8999999999
Q ss_pred cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEE
Q psy17682 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSAS 265 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~ 265 (490)
+|++||+++++.... +.+|...|.+++|+|++. +|++++.|+.|++||+... ...... .|...|.+++
T Consensus 99 ~v~lwd~~~~~~~~~-------~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKR-------FVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEEETTSSCEEEE-------EECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEE
T ss_pred cEEEEECCCCcEEEE-------EcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeee
Confidence 999999998876554 556999999999999995 9999999999999999743 333333 6888999999
Q ss_pred EcCCC----------CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682 266 WNWDG----------SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH 335 (490)
Q Consensus 266 ~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~ 335 (490)
|+|++ .+|++++.|++|++||. ..+....+..|... +.+++|+|+|++|++|+ .|+.|++||+..
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~-v~~~~~s~~g~~l~sgs---~dg~v~iwd~~~ 244 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN-VNHLSISPNGKYIATGG---KDKKLLIWDILN 244 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTCEEEEEESSC
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc-ceEEEECCCCCEEEEEc---CCCeEEEEECCC
Confidence 99987 78999999999999994 45666777788775 99999999999999998 799999999965
Q ss_pred CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE-Eeee---------eeCCCceeeEEEeeC
Q psy17682 336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH-YINT---------FQTPDPQRGIGMMPK 405 (490)
Q Consensus 336 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~-~~~~---------~~~~~~i~~~~~sp~ 405 (490)
...+.... .+...|.+++|+|+++++ ++| .|+.|++|++.+++.... .+.. ..+...+.+++|+|+
T Consensus 245 ~~~~~~~~--~~~~~v~~v~~sp~~~~l-a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 245 LTYPQREF--DAGSTINQIAFNPKLQWV-AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp CSSCSEEE--ECSSCEEEEEECSSSCEE-EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred Ccccceee--cCCCcEEEEEECCCCCEE-EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 44433332 234569999999999877 544 588899999988653221 1110 134467999999999
Q ss_pred ceeEEee--cceeEEEEecCC
Q psy17682 406 RGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 406 ~~~l~~~--~~~~~~~~~~~~ 424 (490)
+.+++++ ++.+++|++.++
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEcc
Confidence 9998887 458899998653
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-40 Score=312.95 Aligned_cols=303 Identities=17% Similarity=0.211 Sum_probs=226.5
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
..+..|.+|.+.|.+++|+|+ +|+||+.|++|++||+..+... .
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~----------------~----------------- 48 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT----------------L----------------- 48 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE----------------E-----------------
T ss_pred ccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE----------------E-----------------
Confidence 356789999999999999985 8999999999999998763200 0
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
+..+. ..+|.+.|.+++|+|++ .+|++|+.|++|++|+
T Consensus 49 ------------------------~~~~~-----------------~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 49 ------------------------IDVLD-----------------ETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWA 86 (330)
T ss_dssp ------------------------EEEEC-----------------TTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEE
T ss_pred ------------------------EEEEe-----------------cCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEE
Confidence 00000 01499999999999998 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEEEEEEcCCC
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVYSASWNWDG 270 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~ 270 (490)
+........-..+...+.+|...|.+++|+|++. +|++|+.|++|++||++. .+.+..+.+|...|.+++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 8643211001123345778999999999999985 999999999999999953 25677788999999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCC--ceeeeeeecCCCceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCC-----eE
Q psy17682 271 SKLLTTCKDKKMRIINPRTG--AIEEEAVCHEGSKATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEP-----IV 341 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~-----~~ 341 (490)
++|++++.|++|++||.+++ +++..+.+|... +.+++|+|+ +.+|++|+ .|+.|++||+...... ..
T Consensus 166 ~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~s---~D~~v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT-VWSSDFDKTEGVFRLCSGS---DDSTVRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCSSSSCEEEEEE---TTSCEEEEEEEEECTTSCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc-EEEEEecCCCCeeEEEEEe---CCCeEEEEEecCCCccccceeEE
Confidence 99999999999999999876 567778888875 999999999 77899998 6899999998754211 11
Q ss_pred EEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCC-ceeeEEEee--CceeEEee--c
Q psy17682 342 MVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPD-PQRGIGMMP--KRGCDVNS--C 413 (490)
Q Consensus 342 ~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~-~i~~~~~sp--~~~~l~~~--~ 413 (490)
.... .|...|.+++|++++ +| ++++.||.|++|+..+++.. ..... ..+.. .|.+++|+| ++.+++++ +
T Consensus 242 ~~~~~~~h~~~v~~v~~s~~~-~l-~s~~~dg~v~iw~~~~~~~~-~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 242 EAILPDVHKRQVYNVAWGFNG-LI-ASVGADGVLAVYEEVDGEWK-VFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEECCSCCSSCEEEEEECTTS-CE-EEEETTSCEEEEEEETTEEE-EEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred eeecccccccceEEEEEcCCC-EE-EEEeCCCEEEEEEcCCCceE-EEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 1122 266789999999765 55 78899999999999876411 11111 23444 799999999 67888876 4
Q ss_pred ceeEEEEecC
Q psy17682 414 EIGRFFRLNN 423 (490)
Q Consensus 414 ~~~~~~~~~~ 423 (490)
+.+++|++..
T Consensus 319 g~v~~W~~~~ 328 (330)
T 2hes_X 319 GIVNFWSLEK 328 (330)
T ss_dssp SEEEEEEC--
T ss_pred CcEEEEEecc
Confidence 5889999764
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.3e-40 Score=332.01 Aligned_cols=330 Identities=17% Similarity=0.304 Sum_probs=268.9
Q ss_pred eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCC
Q psy17682 26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKG 105 (490)
Q Consensus 26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (490)
..|+. ..+.+..+.+|...|++++|+|++ ..|++++.|++|++|+..... ...+.
T Consensus 246 ~~w~~--~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~~~-------------------~~~~~--- 300 (577)
T 2ymu_A 246 KLWNR--NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNGQL-------------------LQTLT--- 300 (577)
T ss_dssp EEECT--TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSCE-------------------EEEEC---
T ss_pred EEEeC--CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCcE-------------------EEEEe---
Confidence 34543 345677899999999999999999 899999999999999965421 11111
Q ss_pred CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe
Q psy17682 106 GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS 185 (490)
Q Consensus 106 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~ 185 (490)
.+...+.+++++|+. ..+++++.++.+++|+.. ......+.+|...|.+++|+|++ .+|++++
T Consensus 301 --~h~~~v~~~~~~~~~-----~~l~t~~~d~~i~~w~~~---------~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~ 363 (577)
T 2ymu_A 301 --GHSSSVWGVAFSPDG-----QTIASASDDKTVKLWNRN---------GQHLQTLTGHSSSVWGVAFSPDG-QTIASAS 363 (577)
T ss_dssp --CCSSCEEEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred --cCCCCeEEEEECCCC-----CEEEEEeCCCeEEEEeCC---------CCeeEEEeCCCCCEEEEEECCCC-CEEEEEe
Confidence 123367889999985 356778899999999975 22345678999999999999998 8999999
Q ss_pred CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682 186 EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS 265 (490)
Q Consensus 186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 265 (490)
.||.|++|+. +++.+. .+.+|...|.+++|+|+++ +|++++.|+.|++||. +++.+..+.+|...|++++
T Consensus 364 ~dg~v~~~~~-~~~~~~-------~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 364 DDKTVKLWNR-NGQLLQ-------TLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp TTSEEEEEET-TCCEEE-------EEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEE
T ss_pred CCCEEEEEcC-CCCEEE-------EecCCCCCeEEEEECCCCC-EEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEE
Confidence 9999999995 444433 3556999999999999995 8999999999999995 6778888999999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682 266 WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL 345 (490)
Q Consensus 266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~ 345 (490)
|+|++++|++++.|++|++||. +++.+..+.+|... +.+++|+|++++|++++ .|+.|++||... +.. ....
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~-v~~~~~spd~~~las~~---~d~~i~iw~~~~-~~~--~~~~ 505 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS-VRGVAFSPDGQTIASAS---DDKTVKLWNRNG-QLL--QTLT 505 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC-EEEEEECTTSCEEEEEE---TTSEEEEEETTS-CEE--EEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---CCCEEEEEcCCC-CEE--EEEe
Confidence 9999999999999999999996 46777888888775 99999999999999998 689999999643 322 2223
Q ss_pred cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682 346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR 420 (490)
Q Consensus 346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~ 420 (490)
.|...|.+++|+|+|++| ++++.||.|++||. +++ ....+ ..|..+|++++|+||++++++++ +.+++|+
T Consensus 506 ~h~~~v~~l~~s~dg~~l-~s~~~dg~v~lwd~-~~~-~~~~~--~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNR-NGQ-LLQTL--TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CCSSCEEEEEECTTSSCE-EEEETTSEEEEECT-TSC-EEEEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEEEcCCCCEE-EEEECcCEEEEEeC-CCC-EEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 577889999999999998 78999999999996 444 22222 24567999999999999988874 4678885
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-41 Score=327.29 Aligned_cols=341 Identities=14% Similarity=0.166 Sum_probs=269.1
Q ss_pred ccceeeeEEeccCCCceEEee----------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682 43 HQRRVGLVLWHPTAQNVLLTA----------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST 112 (490)
Q Consensus 43 H~~~V~~v~~~p~~~~~l~s~----------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (490)
|...|.+++|+|++..+|++| +.|+.|++||+.++.... .... ......
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~---------------~~~~------~~~~~~ 69 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK---------------PIAS------LQVDSK 69 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS---------------CSCC------CCCSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc---------------EEEE------EecCCc
Confidence 557899999999996699999 899999999998754110 0001 112346
Q ss_pred CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682 113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV 192 (490)
Q Consensus 113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i 192 (490)
+.+++|+|+. ..+++++.+|.+++|++. ...........+.+|.+.|.+++|+|+++.+|++++.||.|++
T Consensus 70 v~~~~~s~~~-----~~l~~~~~dg~v~vw~~~----~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 70 FNDLDWSHNN-----KIIAGALDNGSLELYSTN----EANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI 140 (416)
T ss_dssp EEEEEECSSS-----SCEEEEESSSCEEEECCS----STTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred eEEEEECCCC-----CeEEEEccCCeEEEeecc----cccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence 8899999985 356778889999999996 2111123566778999999999999984589999999999999
Q ss_pred EECCCCC------cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC------CCc
Q psy17682 193 WQIPDGG------ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH------PDI 260 (490)
Q Consensus 193 wd~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~ 260 (490)
||+.+++ ....+ .....|...|.+++|+|++..+|++++.|+.|++||+++++.+..+..+ ...
T Consensus 141 wd~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTP----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp CBTTTTSSCTTTCCCBCC----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred EECCCCcccccccccccc----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence 9998876 22221 1245689999999999995569999999999999999999999888866 788
Q ss_pred EEEEEEcCCC-CEEEEEeCCC---eEEEEeCCCC-ceeeeee-ecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecC
Q psy17682 261 VYSASWNWDG-SKLLTTCKDK---KMRIINPRTG-AIEEEAV-CHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAP 333 (490)
Q Consensus 261 v~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~-~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~ 333 (490)
|.+++|+|++ .++++++.|+ .|++||++++ .+...+. .|... +.+++|+| ++.+|++++ .|+.|++||+
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~---~dg~v~~wd~ 292 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG-ILSLDWCHQDEHLLLSSG---RDNTVLLWNP 292 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC-EEEEEECSSCSSCEEEEE---SSSEEEEECS
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc-eeEEEeCCCCCCeEEEEe---CCCCEEEeeC
Confidence 9999999997 6899999998 9999999986 5667776 67765 99999999 899999998 6899999999
Q ss_pred CCCCCCeEEEeccCCCceeeeeecCCC-CeEEEEecCCCeEEEEEecCCCCeeEEee--------------e--------
Q psy17682 334 DHLDEPIVMVELDTSNGVMFPLYDPDT-NLVYLCGKGDSVIRYFEITAEPPFVHYIN--------------T-------- 390 (490)
Q Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--------------~-------- 390 (490)
++.+....+ ..|...|.+++|+|++ ++| ++++.|+.|++|++.+.+....... .
T Consensus 293 ~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (416)
T 2pm9_A 293 ESAEQLSQF--PARGNWCFKTKFAPEAPDLF-ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE 369 (416)
T ss_dssp SSCCEEEEE--ECSSSCCCCEEECTTCTTEE-EECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred CCCccceee--cCCCCceEEEEECCCCCCEE-EEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence 986543222 2566789999999999 555 8999999999999987653211100 0
Q ss_pred ---------e-eCCCceeeEEEeeCceeEEeec--ceeEEEEecCC
Q psy17682 391 ---------F-QTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNS 424 (490)
Q Consensus 391 ---------~-~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~ 424 (490)
. .+..++.+++|+|+|+++++++ +.+++|++.+.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 0 0345778999999999999885 47889988764
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.2e-39 Score=325.46 Aligned_cols=326 Identities=18% Similarity=0.300 Sum_probs=268.0
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
.+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||..... ...+.. +...+
T Consensus 211 ~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~i~~w~~~~~~-------------------~~~~~~-----~~~~v 265 (577)
T 2ymu_A 211 GQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQL-------------------LQTLTG-----HSSSV 265 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCE-------------------EEEECC-----CSSCE
T ss_pred CcEEEEEecCCCCEEEEEECCCC-CEEEEEeCCCEEEEEeCCCCE-------------------EEEEec-----CCCCE
Confidence 45677899999999999999999 899999999999999864311 111111 23367
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
.+++|+|+. ..+++++.++.+++|+.. ......+.+|.+.|.+++|+|++ .++++++.|++|++|
T Consensus 266 ~~v~~~~d~-----~~l~~~~~d~~i~~w~~~---------~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w 330 (577)
T 2ymu_A 266 NGVAFRPDG-----QTIASASDDKTVKLWNRN---------GQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLW 330 (577)
T ss_dssp EEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred EEEEEcCCC-----CEEEEEeCCCEEEEEeCC---------CcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEE
Confidence 889999985 357778899999999864 22455778999999999999988 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
|+.... .. .+.+|...|.+++|+|++. ++++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|
T Consensus 331 ~~~~~~-~~-------~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 331 NRNGQH-LQ-------TLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp ETTSCE-EE-------EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred eCCCCe-eE-------EEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 975432 22 2556999999999999995 9999999999999995 677888899999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF 353 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 353 (490)
++++.|+.|++||. +++.+..+..|... +.+++|+|++++|++++ .|+.|++||... +. ......|...|.+
T Consensus 401 ~~~~~d~~v~~~~~-~~~~~~~~~~~~~~-v~~~~~s~d~~~l~~~~---~d~~v~~w~~~~-~~--~~~~~~~~~~v~~ 472 (577)
T 2ymu_A 401 ASASDDKTVKLWNR-NGQLLQTLTGHSSS-VWGVAFSPDDQTIASAS---DDKTVKLWNRNG-QL--LQTLTGHSSSVRG 472 (577)
T ss_dssp EEEETTSEEEEECT-TCCEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTS-CE--EEEEECCSSCEEE
T ss_pred EEEeCCCEEEEEeC-CCCEEEEecCCCCC-eEEEEECCCCCEEEEEc---CCCEEEEEECCC-CE--EEEEcCCCCCEEE
Confidence 99999999999995 56778888888775 99999999999999998 689999999753 22 2233367788999
Q ss_pred eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682 354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN 422 (490)
Q Consensus 354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~ 422 (490)
++|+|++++| ++++.|+.|++||. +++ ....+. .+...|++++|+|+++++++++ +.+++|+..
T Consensus 473 ~~~spd~~~l-as~~~d~~i~iw~~-~~~-~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 473 VAFSPDGQTI-ASASDDKTVKLWNR-NGQ-LLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEECTTSCEE-EEEETTSEEEEEET-TSC-EEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEcCCCCEE-EEEeCCCEEEEEcC-CCC-EEEEEe--CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 9999999998 78999999999995 444 222222 3557899999999999998874 478999864
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.5e-40 Score=312.02 Aligned_cols=293 Identities=13% Similarity=0.117 Sum_probs=226.3
Q ss_pred ccccCCeeEeccccccceEEEEEeeCC------CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKS------QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA 182 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~------~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~ 182 (490)
+...|++++||||+ ..+++++. ++.+.+|+.. .............+|...|.+++|+|++ .++
T Consensus 41 H~~~V~~v~fSpDG-----~~las~s~d~~~~wd~~v~~~~~~----~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~~l 109 (357)
T 4g56_B 41 MEVQIGAVRYRRDG-----ALLLAASSLSSRTWGGSIWVFKDP----EGAPNESLCTAGVQTEAGVTDVAWVSEK--GIL 109 (357)
T ss_dssp CCSEEEEEEECSSS-----CEEEEEECSSSSSCCEEEEEESSC----C---CGGGCSEEEECSSCEEEEEEETTT--EEE
T ss_pred ccCCEEEEEECCCC-----CEEEEEcCCCCccccCeEEEEECC----CCCcceeEecccCCCCCCEEEEEEcCCC--CEE
Confidence 34468999999996 24555554 7889999875 2222222234456899999999999976 466
Q ss_pred EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682 183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY 262 (490)
Q Consensus 183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 262 (490)
+++.||+|+|||+.+++...... ....+|...|++++|+|++. +|++|+.|+.|++||+++++.+..+.+|...|.
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~---~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNK---FAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp EEETTSCEEEC--------CCCC---EEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEECCCEEEEeeccccceeEEEe---eccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 78899999999998886544322 23456999999999999995 999999999999999999999999999999999
Q ss_pred EEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 263 SASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 263 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
+++|+|++. ++++++.|++|++||++++++...+..+ ....+.+++|+|+ +.+|++|+ .++.|++||+++.+..
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~---~d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD---ETGNVSLVNIKNPDSA 262 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE---SSSCEEEEESSCGGGC
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee---cccceeEEECCCCcEe
Confidence 999999875 7899999999999999998877665532 2334899999998 56888888 6899999999987654
Q ss_pred eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEEee--ccee
Q psy17682 340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDVNS--CEIG 416 (490)
Q Consensus 340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~--~~~~ 416 (490)
..+ ..+...|.+++|+|++..++++|+.|++|+|||+.+++ .+..+.|...|++++|+| ++.+++++ ++.+
T Consensus 263 ~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~----~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 263 QTS--AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE----VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp EEE--CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EEE--eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc----EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE
Confidence 433 35667899999999986544899999999999999876 344456778999999999 78888776 4688
Q ss_pred EEEEecCCC
Q psy17682 417 RFFRLNNSG 425 (490)
Q Consensus 417 ~~~~~~~~~ 425 (490)
++|++....
T Consensus 337 ~iW~~~~~~ 345 (357)
T 4g56_B 337 LHHHLPSEG 345 (357)
T ss_dssp EEEECC---
T ss_pred EEEECCCCC
Confidence 999987654
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.8e-39 Score=304.85 Aligned_cols=302 Identities=16% Similarity=0.157 Sum_probs=242.9
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
...+|.||.+.|++|+|+|++.++|+|||.|++|+|||+........ .....+. .+...|.+
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-------------~~~~~l~-----~h~~~V~~ 91 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-------------IPQRALR-----GHSHFVSD 91 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-------------EEEEEEC-----CCSSCEEE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-------------eeeEEEe-----CCCCCEEE
Confidence 34579999999999999998768999999999999999987542110 0011111 12346889
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~ 195 (490)
++|+|+. ..+++++.++.+++|+.. . .........+...+..+.+++++ .+|++|+.|+.+++||+
T Consensus 92 ~~~s~dg-----~~l~s~~~d~~i~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 92 VVISSDG-----QFALSGSWDGTLRLWDLT----T----GTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEECTTS-----SEEEEEETTSEEEEEETT----T----TEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECT
T ss_pred EEECCCC-----CEEEEEcccccceEEeec----c----cceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEe
Confidence 9999985 367789999999999985 1 12334556788899999999988 89999999999999998
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL 274 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 274 (490)
....... ....+|...+..++|++++. .++++++.|+.|++||+++++.+..+.+|...|++++|+|++++|+
T Consensus 158 ~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 231 (340)
T 4aow_A 158 LGVCKYT------VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 231 (340)
T ss_dssp TSCEEEE------ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCCceEE------EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEE
Confidence 6543322 22456899999999998753 3678999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-------EeccC
Q psy17682 275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-------VELDT 347 (490)
Q Consensus 275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~~~~ 347 (490)
+++.||.|++||+++.+.+..+..+. .+..+.|+|++.+++++. ++.|++||++........ ....|
T Consensus 232 s~s~Dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAAT----GPSIKIWDLEGKIIVDELKQEVISTSSKAE 305 (340)
T ss_dssp EEETTCEEEEEETTTTEEEEEEECSS--CEEEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEECCC-------CC
T ss_pred EEeCCCeEEEEEeccCceeeeecCCc--eEEeeecCCCCceeeccC----CCEEEEEECCCCeEEEeccccceeeeccCC
Confidence 99999999999999999888887554 499999999998887774 889999999865322111 12246
Q ss_pred CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
...|.+++|+|+|++| ++|+.||.|+|||+.+|+
T Consensus 306 ~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 306 PPQCTSLAWSADGQTL-FAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCEEEEEECTTSSEE-EEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEECCCCCEE-EEEeCCCEEEEEeCCCcC
Confidence 6779999999999998 789999999999999885
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-39 Score=314.84 Aligned_cols=348 Identities=12% Similarity=0.126 Sum_probs=265.2
Q ss_pred CcEEeccc--ccceeeeEEeccCCCceEEeeeCCCeEEEEeC----CCCCCCCCCCccccceeccccceeecccC-CCCC
Q psy17682 35 EPVVDLLY--HQRRVGLVLWHPTAQNVLLTAGKEAEPILISL----KDGYIPPSEKSKSALKVTKRSNVLDKVGG-KGGA 107 (490)
Q Consensus 35 ~~~~~l~g--H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 107 (490)
.....+.. |.+.|++++|+|++..+|++|+.||.|++|++ .++... ............... ....
T Consensus 34 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 34 GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY--------WKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C--------EEEEEEEEEECCCCCC----
T ss_pred hhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc--------cccccccccccccccccccc
Confidence 33444444 55999999999999439999999999999999 665410 000000000000000 0011
Q ss_pred cccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682 108 NRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED 187 (490)
Q Consensus 108 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d 187 (490)
.....+.+++|+|+. ..+++++.+|.+.+|+.. ......+.+|...|.+++|+|++ .+|++++.|
T Consensus 106 ~~~~~v~~~~~s~~~-----~~l~~~~~dg~i~i~~~~---------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 170 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDG-----NSIVTGVENGELRLWNKT---------GALLNVLNFHRAPIVSVKWNKDG-THIISMDVE 170 (425)
T ss_dssp --CBCEEEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCCSCEEEEEECTTS-SEEEEEETT
T ss_pred CCCCceEEEEEcCCC-----CEEEEEeCCCeEEEEeCC---------CCeeeeccCCCccEEEEEECCCC-CEEEEEecC
Confidence 134478999999985 367778899999999843 23455778999999999999988 899999999
Q ss_pred CcEEEEECCCCCcccccccceeeecccccC---------------EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRR---------------VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI 252 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~ 252 (490)
|.|++||+.+++....+.. +... +.++.|+|++ .+++++.|+.|++||+++++.+.
T Consensus 171 ~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFEL-------KETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp CCEEEEETTTTEEEEEECC-------C---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSE
T ss_pred CeEEEEECCCCcEEEEeec-------cccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceee
Confidence 9999999988876655432 4443 8999999985 68999999999999999999999
Q ss_pred EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682 253 QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA 332 (490)
Q Consensus 253 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd 332 (490)
.+..|...|.+++|+|++++|++++.|+.|++||+++++....+..|... +.++.|+|++ ++++++ .++.|++||
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~-~l~~~~---~d~~i~i~d 316 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-IVSASWVGDD-KVISCS---MDGSVRLWS 316 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-EEEEEEETTT-EEEEEE---TTSEEEEEE
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-EEEEEECCCC-EEEEEe---CCCcEEEEE
Confidence 99999999999999999999999999999999999999988888877765 9999999999 788887 689999999
Q ss_pred CCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe----------------eEEeeeeeCC--
Q psy17682 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF----------------VHYINTFQTP-- 394 (490)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~----------------~~~~~~~~~~-- 394 (490)
+++...... ...+...+.+++|+|++++| ++++.||.|++||+.+++.. ...+..+..+
T Consensus 317 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (425)
T 1r5m_A 317 LKQNTLLAL--SIVDGVPIFAGRISQDGQKY-AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD 393 (425)
T ss_dssp TTTTEEEEE--EECTTCCEEEEEECTTSSEE-EEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTC
T ss_pred CCCCcEeEe--cccCCccEEEEEEcCCCCEE-EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence 987653222 22456789999999999998 78889999999999876410 0022333333
Q ss_pred C-ceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682 395 D-PQRGIGMMPKRGCDVNS--CEIGRFFRLN 422 (490)
Q Consensus 395 ~-~i~~~~~sp~~~~l~~~--~~~~~~~~~~ 422 (490)
. .|++++|+|++.+++++ ++.+++|++.
T Consensus 394 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 394 NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 3 89999999999988776 4478899875
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=303.26 Aligned_cols=294 Identities=11% Similarity=0.083 Sum_probs=224.2
Q ss_pred ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCC---CCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682 111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPST---APNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED 187 (490)
Q Consensus 111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~---~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d 187 (490)
..+.+++|+|++ + .+++++ ++.+++|+.... ................|...|.+++|+|++ .|++|+.|
T Consensus 31 ~~v~~~~fs~dG--~---~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~d 102 (344)
T 4gqb_B 31 RQLEAARYRSDG--A---LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDS 102 (344)
T ss_dssp SEEEEEEECTTS--C---EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETT
T ss_pred CCEEEEEECCCC--C---EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECC
Confidence 458899999996 2 233333 444444431100 001111111222334577899999999964 78899999
Q ss_pred CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN 267 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 267 (490)
|+|+|||+.+++...... ....+|...|++++|+|+++ +|++|+.|++|++||+++++.+..+.+|...|.+++|+
T Consensus 103 g~v~lWd~~~~~~~~~~~---~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 GAVELWELDENETLIVSK---FCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp SEEEEEEECTTSSCEEEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCceeEee---ccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 999999999887655432 23557999999999999995 99999999999999999999999999999999999999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682 268 WDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE 344 (490)
Q Consensus 268 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~ 344 (490)
|++. +|++++.|++|++||++++++...+..+ ....+.+++|+|+ +++|++|+ .|+.|++||+++.+....+.
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~---~dg~v~~wd~~~~~~~~~~~- 254 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD---ENGTVSLVDTKSTSCVLSSA- 254 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE---TTSEEEEEESCC--CCEEEE-
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec---cCCcEEEEECCCCcEEEEEc-
Confidence 9884 7899999999999999999988777532 2334889999985 67888888 68999999999877654443
Q ss_pred ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee-EEee--cceeEEEEe
Q psy17682 345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC-DVNS--CEIGRFFRL 421 (490)
Q Consensus 345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~--~~~~~~~~~ 421 (490)
.|...|.+++|+|++..++++|+.|+.|+|||+.+++ .+....|...|++++|+|++.. ++++ ++.+++|++
T Consensus 255 -~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~----~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 255 -VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE----LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp -CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred -CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc----EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 5778899999999986544899999999999998875 2333456789999999999864 5454 568899999
Q ss_pred cCCC
Q psy17682 422 NNSG 425 (490)
Q Consensus 422 ~~~~ 425 (490)
.+..
T Consensus 330 ~~~~ 333 (344)
T 4gqb_B 330 PTEP 333 (344)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8765
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.5e-38 Score=298.64 Aligned_cols=326 Identities=11% Similarity=0.100 Sum_probs=261.3
Q ss_pred cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682 42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED 121 (490)
Q Consensus 42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 121 (490)
-|.+.|.+++|+|++ .++++++.++.+.+|...... ....... +...+.+++|+|+
T Consensus 7 ~~~~~v~~~~~s~dg-~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~------h~~~v~~~~~~~~ 62 (337)
T 1gxr_A 7 MGSKPAYSFHVTADG-QMQPVPFPPDALIGPGIPRHA-----------------RQINTLN------HGEVVCAVTISNP 62 (337)
T ss_dssp EEEEECCEEEECSSS-CEEECCCCTTSSSSTTCCSEE-----------------EEEEEEC------CSSCCCEEEECSS
T ss_pred ccCCceeEEEECCCC-CEEEeecCCCcEeccccCCcc-----------------ccceecc------CCCceEEEEEecC
Confidence 366789999999999 788777777766555333211 1111111 2346899999998
Q ss_pred cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee--cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG--GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
. ..+++++ +|.+++|++. .+........+. +|...|.+++|+|++ ++|++++.||.|++||+.+++
T Consensus 63 ~-----~~l~~~~-dg~i~iw~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 63 T-----RHVYTGG-KGCVKVWDIS-----HPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp S-----SEEEEEC-BSEEEEEETT-----STTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC-
T ss_pred C-----cEEEEcC-CCeEEEEECC-----CCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCC
Confidence 5 3455566 9999999986 222222333444 799999999999988 899999999999999998876
Q ss_pred cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD 279 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 279 (490)
... ...+..|...|.+++|+|++. ++++++.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus 131 ~~~-----~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 131 PRI-----KAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp -EE-----EEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cce-----eeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 321 223556899999999999985 99999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682 280 KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD 359 (490)
Q Consensus 280 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 359 (490)
|.|++||+++++.+..+. +.. .+.+++|+|++.++++++ .++.+++||+++.. ......+...+..++|+|+
T Consensus 205 g~i~~~d~~~~~~~~~~~-~~~-~v~~~~~s~~~~~l~~~~---~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHD-FTS-QIFSLGYCPTGEWLAVGM---ESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYC 276 (337)
T ss_dssp SEEEEEETTTTEEEEEEE-CSS-CEEEEEECTTSSEEEEEE---TTSCEEEEETTSSC---EEEECCCSSCEEEEEECTT
T ss_pred CcEEEEECCCCceEeeec-CCC-ceEEEEECCCCCEEEEEc---CCCcEEEEECCCCC---eEEEcCCccceeEEEECCC
Confidence 999999999998877765 333 499999999999999998 68899999998765 2334467788999999999
Q ss_pred CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682 360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN 422 (490)
Q Consensus 360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~ 422 (490)
+++| ++++.||.|++||+.+++.. ....+...+.+++|+|++.++++++ +.+++|++.
T Consensus 277 ~~~l-~~~~~dg~i~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 277 GKWF-VSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SSEE-EEEETTSEEEEEETTTCCEE----EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCEE-EEecCCCcEEEEECCCCeEE----EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9998 78889999999999998732 3345677899999999999888774 477888863
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-39 Score=309.90 Aligned_cols=309 Identities=17% Similarity=0.252 Sum_probs=236.6
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
+....+|.+.|++++|+|++ .+|++|+ |+++++|++.++............ ..................+.++
T Consensus 57 ~~~~~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAA-----NKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp EEEEEECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC----------------------CCCCBEEEE
T ss_pred eEEecCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEecCcccc-----ccccccccccccCCCceeEEEE
Confidence 33445799999999999999 7888876 689999999887521110000000 0000000000011122358899
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 196 (490)
+|+|+. ..+++++.++.|++|++. .+ +....+.+|...|.+++|+|++ .+|++|+.|++|++||++
T Consensus 130 ~~s~dg-----~~l~s~~~d~~i~iwd~~-----~~---~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 130 CFSPDG-----KFLATGAEDRLIRIWDIE-----NR---KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp EECTTS-----SEEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred EECCCC-----CEEEEEcCCCeEEEEECC-----CC---cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECC
Confidence 999985 357788999999999985 22 2455788999999999999998 899999999999999999
Q ss_pred CCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEE-------ecCCCcEEEEEEcC
Q psy17682 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQI-------ECHPDIVYSASWNW 268 (490)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~ 268 (490)
+++....+. +...+.+++|+| ++ .+|++|+.|+.|++||+++++.+..+ .+|...|.+++|+|
T Consensus 196 ~~~~~~~~~--------~~~~v~~~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 196 TGQCSLTLS--------IEDGVTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp TTEEEEEEE--------CSSCEEEEEECSTTC-CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred CCeeEEEEE--------cCCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence 887654432 667899999999 56 59999999999999999999887776 46889999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------------ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682 269 DGSKLLTTCKDKKMRIINPRTG------------AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL 336 (490)
Q Consensus 269 ~~~~l~~~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~ 336 (490)
++++|++++.|++|++||+++. .+...+.+|... +.+++|+|++.+|++|+ .|+.|++||..++
T Consensus 267 ~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sgs---~D~~v~iwd~~~~ 342 (393)
T 1erj_A 267 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF-VLSVATTQNDEYILSGS---KDRGVLFWDKKSG 342 (393)
T ss_dssp TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSC-EEEEEECGGGCEEEEEE---TTSEEEEEETTTC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc-EEEEEECCCCCEEEEEe---CCCeEEEEECCCC
Confidence 9999999999999999999763 344556677765 99999999999999998 7899999999986
Q ss_pred CCCeEEEeccCCCceeeeeecC------CCCeEEEEecCCCeEEEEEecCCC
Q psy17682 337 DEPIVMVELDTSNGVMFPLYDP------DTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 337 ~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..... ...|...|.+++|++ ++++| ++|+.||.|++|++...+
T Consensus 343 ~~~~~--l~~h~~~v~~v~~~~~~~~~p~~~~l-~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 343 NPLLM--LQGHRNSVISVAVANGSSLGPEYNVF-ATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp CEEEE--EECCSSCEEEEEECSSCTTCTTCEEE-EEEETTSEEEEEEEEEC-
T ss_pred eEEEE--ECCCCCCEEEEEecCCcCcCCCCCEE-EEECCCCcEEECcccccC
Confidence 64322 235778899999876 56676 899999999999997643
No 26
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.5e-39 Score=313.73 Aligned_cols=327 Identities=13% Similarity=0.114 Sum_probs=254.5
Q ss_pred ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK 124 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 124 (490)
..+++++|+|++ .+|++++.|+.|++||+.++....... ....+....++++.
T Consensus 57 ~~~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~~~~~~~------------------------~~~~~~~~~~~~~~-- 109 (420)
T 3vl1_A 57 DAGKGNTFEKVG-SHLYKARLDGHDFLFNTIIRDGSKMLK------------------------RADYTAVDTAKLQM-- 109 (420)
T ss_dssp BCCTTCEEEEEE-TTEEEEEETTEEEEEECCSEETTTTSC------------------------SCCEEEEEEECSSS--
T ss_pred ccccceeeeecC-CeEEEEEcCCcEEEEEecccceeeEEe------------------------cCCceEEEEEecCC--
Confidence 345589999999 899999999999999998754221100 00122334566664
Q ss_pred ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682 125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL 204 (490)
Q Consensus 125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 204 (490)
..+++++.+|.+++|++. .+ .....+.+|.+.|.+++|+|++ .+|++|+.|++|++||+.+++.+..
T Consensus 110 ---~~l~~~~~dg~i~iwd~~-----~~---~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~- 176 (420)
T 3vl1_A 110 ---RRFILGTTEGDIKVLDSN-----FN---LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRT- 176 (420)
T ss_dssp ---CEEEEEETTSCEEEECTT-----SC---EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEE-
T ss_pred ---CEEEEEECCCCEEEEeCC-----Cc---ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceE-
Confidence 357788999999999985 22 2344557999999999999988 8999999999999999998876554
Q ss_pred ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec---CCCcEEEEE----------------
Q psy17682 205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC---HPDIVYSAS---------------- 265 (490)
Q Consensus 205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~---------------- 265 (490)
+.+|...|.+++|+|++. +|++++.|+.|++||+++++.+..+.. +...+.+++
T Consensus 177 ------~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 177 ------LIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp ------EECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred ------EcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 456999999999999985 999999999999999999999888874 444455554
Q ss_pred -----EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 266 -----WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 266 -----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
|+|++++|++++.||.|++||+++++....+.......+.+++|+|++. +|++|+ .++.|++||+++...+
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~---~dg~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY---ENGMLAQWDLRSPECP 326 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE---TTSEEEEEETTCTTSC
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe---CCCeEEEEEcCCCcCc
Confidence 5788999999999999999999999888777653334599999999998 999998 6899999999987765
Q ss_pred eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE------EeeeeeCCCceeeEEEeeCce----eE
Q psy17682 340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH------YINTFQTPDPQRGIGMMPKRG----CD 409 (490)
Q Consensus 340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~------~~~~~~~~~~i~~~~~sp~~~----~l 409 (490)
......++...+..+.+ +++++| ++++.|+.|++|++........ ......+...+.+++|+|++. ++
T Consensus 327 ~~~~~~~~~~~v~~~~~-~~~~~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~ 404 (420)
T 3vl1_A 327 VGEFLINEGTPINNVYF-AAGALF-VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL 404 (420)
T ss_dssp SEEEEESTTSCEEEEEE-ETTEEE-EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE
T ss_pred hhhhhccCCCCceEEEe-CCCCEE-EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE
Confidence 55555456667888755 567776 7899999999999987432110 111223557899999999988 55
Q ss_pred Eee-cceeEEEEecC
Q psy17682 410 VNS-CEIGRFFRLNN 423 (490)
Q Consensus 410 ~~~-~~~~~~~~~~~ 423 (490)
+++ .+.+.+|++++
T Consensus 405 a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 405 EVGKNNFCALYNLSN 419 (420)
T ss_dssp EEETTTEEEEEESCC
T ss_pred EEcCCceEEEEeccC
Confidence 555 45778898764
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-38 Score=308.75 Aligned_cols=259 Identities=18% Similarity=0.251 Sum_probs=225.8
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+ ......+.+|.+.|.+++|+|++ .+|+||+.|++|++||+.++.
T Consensus 132 i~vwd~~~-~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~-------------------------- 183 (410)
T 1vyh_C 132 IKVWDYET-GDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFE-------------------------- 183 (410)
T ss_dssp EEEEETTT-CCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSC--------------------------
T ss_pred EEEEECCC-CcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc--------------------------
Confidence 44455433 34567899999999999999999 899999999999999987632
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG 184 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~ 184 (490)
.+..+.+|...|.+++|+|++ .+|++|
T Consensus 184 ----------------------------------------------------~~~~~~~h~~~V~~v~~~p~~-~~l~s~ 210 (410)
T 1vyh_C 184 ----------------------------------------------------CIRTMHGHDHNVSSVSIMPNG-DHIVSA 210 (410)
T ss_dssp ----------------------------------------------------EEECCCCCSSCEEEEEECSSS-SEEEEE
T ss_pred ----------------------------------------------------eeEEEcCCCCCEEEEEEeCCC-CEEEEE
Confidence 111345899999999999988 899999
Q ss_pred eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA 264 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~ 264 (490)
+.|++|++||++++.++.. +.+|...|.++.|+|++. +|++|+.|+.|++||+++++....+.+|...|.++
T Consensus 211 s~D~~i~~wd~~~~~~~~~-------~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKT-------FTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp ETTSEEEEEETTTCCEEEE-------EECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred eCCCeEEEEECCCCcEEEE-------EeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 9999999999998876554 456999999999999995 99999999999999999999999999999999999
Q ss_pred EEcCC--------------------CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682 265 SWNWD--------------------GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324 (490)
Q Consensus 265 ~~~~~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 324 (490)
+|+|+ +.+|++|+.|++|++||+++++++..+.+|... +.+++|+|+|++|++|+ .
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s---~ 358 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA---D 358 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE---T
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc-EEEEEEcCCCCEEEEEe---C
Confidence 99996 678999999999999999999999999988875 99999999999999998 6
Q ss_pred eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682 325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
|+.|++||+.+......+. .|...|.+++|+|++++| ++|+.||.|++|+++
T Consensus 359 D~~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 359 DKTLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWECR 410 (410)
T ss_dssp TTEEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC--
T ss_pred CCeEEEEECCCCceEEEEc--CCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEeCC
Confidence 8999999998876554443 567789999999999998 899999999999864
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=299.30 Aligned_cols=249 Identities=16% Similarity=0.190 Sum_probs=219.5
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
....+.||...|.+++|+|++ .+++|++.|++|++||+.++..
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~------------------------------------ 114 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQ------------------------------------ 114 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE------------------------------------
T ss_pred eeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCE------------------------------------
Confidence 345689999999999999999 8999999999999999987430
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~ 195 (490)
+..+..|...+.+++|+|++ .+|++|+.||.|++|++
T Consensus 115 ------------------------------------------~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 115 ------------------------------------------IKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGV 151 (321)
T ss_dssp ------------------------------------------EEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEET
T ss_pred ------------------------------------------EEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEc
Confidence 11234567788899999998 89999999999999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT 275 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 275 (490)
++++.... +..|...|.+++|+|+++ +|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++
T Consensus 152 ~~~~~~~~-------~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 152 ESGKKEYS-------LDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp TTCSEEEE-------EECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred CCCceeEE-------ecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE
Confidence 88866544 445888999999999995 9999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682 276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL 355 (490)
Q Consensus 276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 355 (490)
++.|++|++||+++++....+.+|... +.+++|+|++.+|++++ .|+.|++||+.+..+... ...|...|.+++
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~--~~~h~~~v~~v~ 297 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTLSGHASW-VLNVAFCPDDTHFVSSS---SDKSVKVWDVGTRTCVHT--FFDHQDQVWGVK 297 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred EcCCCeEEEEECCCcceeEEEcCCCCc-eEEEEECCCCCEEEEEe---CCCcEEEEeCCCCEEEEE--EcCCCCcEEEEE
Confidence 999999999999999999999888875 99999999999999998 689999999987654322 235778899999
Q ss_pred ecCCCCeEEEEecCCCeEEEEEec
Q psy17682 356 YDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 356 ~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
|+|++++| ++++.|+.|++||+.
T Consensus 298 ~s~~g~~l-~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 298 YNGNGSKI-VSVGDDQEIHIYDCP 320 (321)
T ss_dssp ECTTSSEE-EEEETTCCEEEEECC
T ss_pred ECCCCCEE-EEEeCCCeEEEEeCC
Confidence 99999998 789999999999963
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.2e-38 Score=327.38 Aligned_cols=296 Identities=14% Similarity=0.177 Sum_probs=239.2
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
....+.+|.+.|++++|+|++..+|+|||.|++|++|++.......
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---------------------------------- 419 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---------------------------------- 419 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS----------------------------------
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc----------------------------------
Confidence 3456899999999999999887899999999999999987633100
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~ 195 (490)
......+.+|.+.|.+++|+|++ .+|++|+.||+|++||+
T Consensus 420 ---------------------------------------~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 420 ---------------------------------------GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDL 459 (694)
T ss_dssp ---------------------------------------CEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred ---------------------------------------ccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEC
Confidence 00112467999999999999998 89999999999999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEcCCC--
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWNWDG-- 270 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~-- 270 (490)
.+++.... +.+|...|.+++|+|++. +|++|+.|++|++||.......... .+|...|.+++|+|++
T Consensus 460 ~~~~~~~~-------~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 460 AAGVSTRR-------FVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp TTTEEEEE-------EECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CCCcceeE-------EeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 88865544 556999999999999995 8999999999999998655433322 3688899999999987
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG 350 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~ 350 (490)
..|++++.|++|++||+++++....+.+|.+. +.+++|+|++++|++|+ .|+.|++||+++++ ......+...
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~-v~~v~~spdg~~l~sg~---~Dg~i~iwd~~~~~---~~~~~~~~~~ 604 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDGSLCASGG---KDGVVLLWDLAEGK---KLYSLEANSV 604 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSBCEEEETTTTE---EEECCBCSSC
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC-EEEEEEeCCCCEEEEEe---CCCeEEEEECCCCc---eEEEecCCCc
Confidence 58999999999999999999999999888875 99999999999999998 78999999998765 3344455677
Q ss_pred eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee----------------eCCCceeeEEEeeCceeEEee--
Q psy17682 351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF----------------QTPDPQRGIGMMPKRGCDVNS-- 412 (490)
Q Consensus 351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~----------------~~~~~i~~~~~sp~~~~l~~~-- 412 (490)
+.+++|+|++.++ +++ .|+.|++||+.+++.+....... .+...+++++|+|+|.+++++
T Consensus 605 v~~~~~sp~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 605 IHALCFSPNRYWL-CAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp EEEEEECSSSSEE-EEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEcCCCcEE-EEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 9999999999887 444 46779999999876322111000 011236899999999999988
Q ss_pred cceeEEEEec
Q psy17682 413 CEIGRFFRLN 422 (490)
Q Consensus 413 ~~~~~~~~~~ 422 (490)
++.+++|++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 4588999875
No 30
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-37 Score=299.26 Aligned_cols=298 Identities=13% Similarity=0.106 Sum_probs=235.3
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
......+.+|.+.|++++|+|+++.+|++|+.||.|++||+.++...
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--------------------------------- 109 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT--------------------------------- 109 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE---------------------------------
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc---------------------------------
Confidence 44566889999999999999998789999999999999999864410
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
..+ ...+|.+.|.+++|+|+++.+|++++.|+.|++|
T Consensus 110 --------------------------~~~-----------------~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 110 --------------------------SFI-----------------QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp --------------------------EEE-----------------CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred --------------------------eee-----------------ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 000 1237999999999999444899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-E
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-K 272 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 272 (490)
|+.+ +....+.. ...|...|.+++|+|++. +|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +
T Consensus 147 d~~~-~~~~~~~~----~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 147 DFSG-SVIQVFAK----TDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp ETTS-CEEEEEEC----CCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred ECCC-CceEEEec----cCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 9985 33332221 234568899999999995 9999999999999999 5778888999999999999999998 9
Q ss_pred EEEEeCCCeEEEEeCCC----CceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-
Q psy17682 273 LLTTCKDKKMRIINPRT----GAIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD- 346 (490)
Q Consensus 273 l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~- 346 (490)
|++++.|+.|++||+++ +..+..+ .|... +.+++|+| ++.+|++++ .|+.|++||+++......+....
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP-VNAAYFNPTDSTKLLTTD---QRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC-EEEEEECTTTSCEEEEEE---SSSEEEEEETTBTTSCSEEEECCB
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc-eEEEEEcCCCCCEEEEEc---CCCcEEEEECCCCccccccccccc
Confidence 99999999999999998 5555555 56654 99999999 999999998 68999999999877655544221
Q ss_pred ----CC----------CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682 347 ----TS----------NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 347 ----~~----------~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 412 (490)
+. ..+..++|+|++++ +|+.|+.|++||+.+++. ...+....+...+..++|+|++.+++++
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~-~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE-EEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred cccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce-eeeecCCCCCceEEEEEEecCccEEEEe
Confidence 11 23344666666666 677999999999999873 2333322234567778999999988877
Q ss_pred -cceeEEEEecC
Q psy17682 413 -CEIGRFFRLNN 423 (490)
Q Consensus 413 -~~~~~~~~~~~ 423 (490)
++.+++|++.+
T Consensus 371 sd~~i~iw~~~~ 382 (383)
T 3ei3_B 371 MGFNILIWNRED 382 (383)
T ss_dssp ETTEEEEEECC-
T ss_pred cCCcEEEEecCC
Confidence 44889999864
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-37 Score=289.82 Aligned_cols=254 Identities=14% Similarity=0.183 Sum_probs=216.6
Q ss_pred CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682 157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS 236 (490)
Q Consensus 157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 236 (490)
..+++.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++..+.. +..|...|.+++|+|++. +|++|+.
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~~~~-------~~~~~~~v~~~~~~~~~~-~l~s~s~ 75 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVEVRS-------IQVTETPVRAGKFIARKN-WIIVGSD 75 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEE-------EECCSSCEEEEEEEGGGT-EEEEEET
T ss_pred eEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCceeEE-------eeccCCcEEEEEEeCCCC-EEEEECC
Confidence 355788999999999999998 8999999999999999988866554 455899999999999985 9999999
Q ss_pred CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCceeEEEEeC-CCc
Q psy17682 237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLK-SGL 314 (490)
Q Consensus 237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~-~~~ 314 (490)
|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++. ....+.+|... +.+++|+| ++.
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~ 154 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPS 154 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC-EEEEEECTTCTT
T ss_pred CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc-EEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999999999999874 45566777765 99999999 578
Q ss_pred EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC--CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-
Q psy17682 315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP--DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF- 391 (490)
Q Consensus 315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~- 391 (490)
+|++|+ .|+.|++||++......... ..+...+..+.|+| ++++| ++|+.|+.|++||+++++. +..+
T Consensus 155 ~l~sgs---~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~~~~----~~~~~ 225 (304)
T 2ynn_A 155 TFASGC---LDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSC----VATLE 225 (304)
T ss_dssp EEEEEE---TTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEE-EEEETTSEEEEEETTTTEE----EEEEE
T ss_pred EEEEEe---CCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEE-EEEcCCCeEEEEeCCCCcc----ceeeC
Confidence 999998 79999999998766544433 34556788888887 66777 8999999999999998862 2223
Q ss_pred eCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEE
Q psy17682 392 QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQV 429 (490)
Q Consensus 392 ~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~ 429 (490)
.|...|..++|+|++.+++++ ++.+++|++.+.+....
T Consensus 226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 355789999999999988887 45889999998874443
No 32
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-37 Score=288.41 Aligned_cols=257 Identities=20% Similarity=0.239 Sum_probs=211.1
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
+..+.+|.+.|++++|+|++ .+|+||+.|++|+|||+..+..
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~------------------------------------- 43 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH------------------------------------- 43 (297)
T ss_dssp CEECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-------------------------------------
T ss_pred ceeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-------------------------------------
Confidence 45788999999999999999 8999999999999999864210
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEEC
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~ 195 (490)
....++.+|.++|.+++|+|. .+.+|++|+.|++|++||+
T Consensus 44 ---------------------------------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 44 ---------------------------------------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp ---------------------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ---------------------------------------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 012356799999999999864 2389999999999999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD-- 269 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~-- 269 (490)
++++... ...+.+|...|.+++|+|+ + .+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 85 ~~~~~~~-----~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 85 ENGRWSQ-----IAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp SSSCBCC-----CEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred CCCceEE-----EEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 8764311 2235569999999999997 6 499999999999999998763 24567789999999999997
Q ss_pred -----------CCEEEEEeCCCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCCC---cEEEEEeCCCceeEEEEe
Q psy17682 270 -----------GSKLLTTCKDKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKSG---LIFTTGFSKMSERQYSLR 331 (490)
Q Consensus 270 -----------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~~---~~l~~~~~~~~~~~i~iw 331 (490)
+++|++++.|++|++||+++++ ....+.+|... +.+++|+|++ .+|++++ .|+.|++|
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-V~~v~~sp~~~~~~~las~s---~D~~v~iW 234 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYMASVS---QDRTCIIW 234 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---TTSCEEEE
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-eEEEEECCCCCCceEEEEEE---CCCcEEEE
Confidence 5799999999999999998776 55667788775 9999999994 8999998 78999999
Q ss_pred cCCCCCCCeEEEe---ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 332 APDHLDEPIVMVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 332 d~~~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
|++....+..... ..+...|.+++|+|+|++| ++++.|+.|++|+....
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-as~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCE-EEEETTSCEEEEEECTT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCCEE-EEEcCCCcEEEEEECCC
Confidence 9987543222222 2456679999999999998 78999999999998743
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-38 Score=306.63 Aligned_cols=297 Identities=14% Similarity=0.148 Sum_probs=241.3
Q ss_pred cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682 110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189 (490)
Q Consensus 110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~ 189 (490)
...|.+++|+|+. ..+++++.|+.|++|+.. .+ .....+.+|...|.+++|+|++ .+|++|+.|+.
T Consensus 66 ~~~V~~~~~sp~~-----~~l~s~s~D~~v~iWd~~-----~~---~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~ 131 (380)
T 3iz6_a 66 SGKVYSLDWTPEK-----NWIVSASQDGRLIVWNAL-----TS---QKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSA 131 (380)
T ss_dssp SSCEEEEEECTTS-----SCEEEEETTSEEEEEETT-----TT---EEEEEEECCCTTCCCCEECTTS-SEEEECCSSSC
T ss_pred ccEEEEEEEcCCC-----CEEEEEeCCCeEEEEECC-----CC---ccceEEecCCCCEEEEEECCCC-CEEEEeeCCCc
Confidence 4468999999985 357889999999999985 22 2456778999999999999998 89999999999
Q ss_pred EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-----ecCCCcEEEE
Q psy17682 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-----ECHPDIVYSA 264 (490)
Q Consensus 190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~ 264 (490)
|++|++.+.............+.+|...|.++.|.|++...|++|+.|++|++||+++++.+..+ .+|...|.++
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 99999976432211112233467899999999999987668999999999999999999988877 5788999999
Q ss_pred EEcC-CCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682 265 SWNW-DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342 (490)
Q Consensus 265 ~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~ 342 (490)
+|++ ++++|++|+.|++|++||++ .++.+..+.+|.+. +.+++|+|++.+|++|+ .|+.|++||++++......
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD-INSVKFFPDGQRFGTGS---DDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC-CCEEEECTTSSEEEEEC---SSSCEEEEETTTTEEEEEE
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC-eEEEEEecCCCeEEEEc---CCCeEEEEECCCCcEEEEe
Confidence 9987 88999999999999999998 45777888888876 99999999999999998 7899999999986543322
Q ss_pred Eecc-----CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeEEEeeCceeEEee--cc
Q psy17682 343 VELD-----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGIGMMPKRGCDVNS--CE 414 (490)
Q Consensus 343 ~~~~-----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~--~~ 414 (490)
.... +...+.+++|+|+|++| ++|+.||.|++||+..++........ ..|...|.+++|+|++.+++++ ++
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEE-EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred cccccccccccCceEEEEECCCCCEE-EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 2111 11248899999999998 78999999999999888733222111 2356789999999999999988 45
Q ss_pred eeEEEEecCCC
Q psy17682 415 IGRFFRLNNSG 425 (490)
Q Consensus 415 ~~~~~~~~~~~ 425 (490)
.+++|++....
T Consensus 367 ~i~iW~~~~~~ 377 (380)
T 3iz6_a 367 NLKIWAFSGHR 377 (380)
T ss_dssp CEEEEECCSSS
T ss_pred CEEEEecCCCc
Confidence 88999987654
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-39 Score=314.60 Aligned_cols=302 Identities=13% Similarity=0.125 Sum_probs=226.7
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.......+|...|+||+|+|.++.+||+|+.||+|+|||+..+...
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~---------------------------------- 155 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP---------------------------------- 155 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC----------------------------------
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce----------------------------------
Confidence 3445677899999999999987789999999999999998764310
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
....+.+|.+.|++|+|+|.++.+|++|+.||+|++||
T Consensus 156 ------------------------------------------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 156 ------------------------------------------TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp ------------------------------------------EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred ------------------------------------------eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 00123489999999999996558999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-EE
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-KL 273 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 273 (490)
++++... .+. ....+...+.+++|+|++. +|++|+.||.|++||++ ++.+..+.+|...|.+++|+|+++ +|
T Consensus 194 ~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 194 FKGNILR-VFA----SSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp TTSCEEE-EEE----CCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred ccCCcee-EEe----ccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE
Confidence 9765332 111 1223445678999999995 99999999999999986 456677889999999999999876 78
Q ss_pred EEEeCCCeEEEEeCCCCceeeee---eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC---
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEA---VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT--- 347 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~--- 347 (490)
++++.|++|++||+++.+....+ .+|... +.+++|+|+|.+|++++ .|+.|++||+.+...+.......+
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~spdg~~l~s~~---~D~~i~iwd~~~~~~~~~~~~~~~~~~ 342 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHP-VNAACFSPDGARLLTTD---QKSEIRVYSASQWDCPLGLIPHPHRHF 342 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSC-EEECCBCTTSSEEEEEE---SSSCEEEEESSSSSSEEEECCCCCCCC
T ss_pred EEecCcceeeEEecccccccceEEEeeecccc-ccceeECCCCCeeEEEc---CCCEEEEEECCCCccceEEeccccccc
Confidence 89999999999999987654433 356654 99999999999999998 789999999998775544332111
Q ss_pred -CCceeeeeecCCCCeEEE-----------EecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEee-c
Q psy17682 348 -SNGVMFPLYDPDTNLVYL-----------CGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVNS-C 413 (490)
Q Consensus 348 -~~~i~~~~~s~~~~~l~~-----------~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~-~ 413 (490)
...+....|+|++..+++ ++..++.|++||..+++...... ..+...|.++ +|+|+|.+++++ +
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~--~~~~~~v~s~~~fspdg~~lasg~d 420 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY--DPESSGISSLNEFNPMGDTLASAMG 420 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC--CSSCCCCCCEEEECTTSSCEEEECS
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe--CCCCCcEEEEEEECCCCCEEEEEcC
Confidence 112334456666655532 22345689999999987332211 1344678887 699999999887 4
Q ss_pred ceeEEEEecCCC
Q psy17682 414 EIGRFFRLNNSG 425 (490)
Q Consensus 414 ~~~~~~~~~~~~ 425 (490)
+.+++|++.+++
T Consensus 421 ~~i~iW~~~~gk 432 (435)
T 4e54_B 421 YHILIWSQQEAR 432 (435)
T ss_dssp SEEEECCCC---
T ss_pred CcEEEEECCcCe
Confidence 588999998876
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=290.56 Aligned_cols=294 Identities=16% Similarity=0.240 Sum_probs=245.1
Q ss_pred CCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682 32 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS 111 (490)
Q Consensus 32 ~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (490)
........|.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~--------------------------------- 65 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE--------------------------------- 65 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC---------------------------------
T ss_pred ccccccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch---------------------------------
Confidence 3455667799999999999999998 899999999999999987643
Q ss_pred cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK 191 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~ 191 (490)
....+.+|.+.|.+++|+|++ ++|++++.||.|+
T Consensus 66 ---------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 66 ---------------------------------------------RLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIK 99 (369)
T ss_dssp ---------------------------------------------EEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEE
T ss_pred ---------------------------------------------hhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEE
Confidence 111345799999999999988 8999999999999
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCCCe-----------eEEEEe
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGTGE-----------IMIQIE 255 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~~~-----------~~~~~~ 255 (490)
+||+.+++....+. +...+.+++|+|++. ++++++.+ +.|++||+..+. .+..+.
T Consensus 100 iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 170 (369)
T 3zwl_B 100 LWDVSNGQCVATWK--------SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII 170 (369)
T ss_dssp EEETTTCCEEEEEE--------CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred EEECCCCcEEEEee--------cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence 99999887765432 788999999999995 89999998 999999987653 344455
Q ss_pred cCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682 256 CHPD--IVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA 332 (490)
Q Consensus 256 ~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd 332 (490)
.|.. .+.+++|+|++++|++++.||.|++||+++ ++....+..|... +.+++|+|++.+|++++ .++.|++||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~d~~i~v~d 246 (369)
T 3zwl_B 171 THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS-ISDMQFSPDLTYFITSS---RDTNSFLVD 246 (369)
T ss_dssp CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEE
T ss_pred CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc-eeEEEECCCCCEEEEec---CCceEEEEE
Confidence 5666 899999999999999999999999999998 6777788777765 99999999999999998 689999999
Q ss_pred CCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--------------eEEEEEecCCCCeeEEeeeeeCCCcee
Q psy17682 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--------------VIRYFEITAEPPFVHYINTFQTPDPQR 398 (490)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~i~ 398 (490)
+++... .....+...+..++|+|+++++ ++++.++ .+++||+.++++.. .+ ..+...|+
T Consensus 247 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~--~~~~~~v~ 319 (369)
T 3zwl_B 247 VSTLQV---LKKYETDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG-RV--QGHFGPLN 319 (369)
T ss_dssp TTTCCE---EEEEECSSCEEEEEECSSSSEE-EEEECCC-------------CEEEEEETTTCCEEE-EE--ECCSSCEE
T ss_pred CCCCce---eeeecCCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcceeEEEecCCCcchh-he--ecccCcEE
Confidence 998653 3333466789999999999999 5666666 89999999987332 22 23557899
Q ss_pred eEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 399 GIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 399 ~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
+++|+|++.+++++ ++.+++|++..+.
T Consensus 320 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 320 TVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 99999999998887 4588999988654
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.6e-37 Score=289.57 Aligned_cols=253 Identities=19% Similarity=0.203 Sum_probs=213.6
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
..++..+.+|...|.+++|+|++ .+|+||+.|++|++||+.+++
T Consensus 55 ~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~----------------------------------- 98 (319)
T 3frx_A 55 GVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGE----------------------------------- 98 (319)
T ss_dssp EEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-----------------------------------
T ss_pred cccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC-----------------------------------
Confidence 34677899999999999999999 899999999999999998743
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
....+.+|.+.|.+++|+|++ .+|++|+.|++|++|
T Consensus 99 -------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vw 134 (319)
T 3frx_A 99 -------------------------------------------TYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVW 134 (319)
T ss_dssp -------------------------------------------EEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEE
T ss_pred -------------------------------------------eeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEE
Confidence 111356899999999999988 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCC-----CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-----QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 268 (490)
|++. +.+ ..+.+|...|.++.|.|.. ..++++++.|+.|++||+++++....+.+|...|.+++|+|
T Consensus 135 d~~~-~~~-------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 135 TIKG-QCL-------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp ETTS-CEE-------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT
T ss_pred ECCC-CeE-------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC
Confidence 9853 222 2356799999999999853 23899999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----
Q psy17682 269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE---- 344 (490)
Q Consensus 269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~---- 344 (490)
++++|++++.||+|++||+++++.+..+..+. .+.+++|+|++.+++++. +..+++|++...........
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~la~~~----~~~i~v~~~~~~~~~~~~~~~~~~ 280 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD--EVFSLAFSPNRYWLAAAT----ATGIKVFSLDPQYLVDDLRPEFAG 280 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECCS--CEEEEEECSSSSEEEEEE----TTEEEEEEETTEEEEEEECCCCTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--cEEEEEEcCCCCEEEEEc----CCCcEEEEeCcCeeeeccCccccc
Confidence 99999999999999999999999888887543 499999999999999987 45699999876432111110
Q ss_pred --ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 345 --LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 345 --~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
..+...+.+++|+|||++| ++|+.||.|++||+.++
T Consensus 281 ~~~~~~~~v~~~~~spdg~~l-~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 281 YSKAAEPHAVSLAWSADGQTL-FAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCGGGCCCEEEEEECTTSSEE-EEEETTSCEEEEEEEEC
T ss_pred cccCcCcceeEEEECCCCCEE-EEeecCceEEEEEEeec
Confidence 1234568899999999999 78999999999999764
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-37 Score=296.04 Aligned_cols=297 Identities=13% Similarity=0.173 Sum_probs=234.8
Q ss_pred EecccccceeeeEEeccC---CCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 38 VDLLYHQRRVGLVLWHPT---AQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 38 ~~l~gH~~~V~~v~~~p~---~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
..+.+|.+.|++++|+|. +...+++++.++.|++||+.++... ..
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~------------------~~-------------- 59 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI------------------RL-------------- 59 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE------------------EE--------------
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE------------------Ee--------------
Confidence 456699999999999995 4466777777789999999864310 00
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC---CCEEEEEeCCCcEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD---DNVIASGSEDCVVK 191 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~---~~~l~s~~~dg~i~ 191 (490)
+..+ ....|...|.+++|+|++ +.+|++|+.||.|+
T Consensus 60 ------------------------~~~~-----------------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 60 ------------------------LQSY-----------------VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp ------------------------EEEE-----------------ECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred ------------------------eeec-----------------cccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 0000 011477899999999983 16999999999999
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEc
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWN 267 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~ 267 (490)
+||+.+++.+.. +.+|...|.+++|+| ++ .+|++++.||.|++||+++++.+..+ ..|...|.+++|+
T Consensus 99 v~d~~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 99 IINPITMQCIKH-------YVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EECTTTCCEEEE-------EESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred EEEchhceEeee-------ecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 999988876554 456999999999999 66 59999999999999999999998888 6799999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeeeee----------------------------cCCCceeEEEEeCCCcEEEEE
Q psy17682 268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVC----------------------------HEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------~~~~~~~~~~~s~~~~~l~~~ 319 (490)
|++++|++++.||.|++||+++++....+.. |... +.++.|+ +.+++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY-VDCVRWL--GDLILSK 247 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-CCEEEEE--TTEEEEE
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce-EEEEEEc--CCEEEEE
Confidence 9999999999999999999998765443332 5554 8999998 7788888
Q ss_pred eCCCceeEEEEecCCCCCCC------------eEEEeccCCCceeeeeecCC--CCeEEEEecCCCeEEEEEecCCCCee
Q psy17682 320 FSKMSERQYSLRAPDHLDEP------------IVMVELDTSNGVMFPLYDPD--TNLVYLCGKGDSVIRYFEITAEPPFV 385 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~------------~~~~~~~~~~~i~~~~~s~~--~~~l~~~g~~dg~i~iwd~~~~~~~~ 385 (490)
+ .++.|++||+.+.... .......+...|..++|+|+ +++| ++|+.||.|++||+.++++..
T Consensus 248 ~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 248 S---CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML-ALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp C---SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE-EEECTTSCEEEEECCSSSGGG
T ss_pred e---cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE-EEEecCCcEEEEECCCCCCcc
Confidence 8 6899999999876541 12222346667999999999 9998 789999999999999987443
Q ss_pred EEeeeeeC---CCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682 386 HYINTFQT---PDPQRGIGMMPKRGCDVNSC--EIGRFFRLN 422 (490)
Q Consensus 386 ~~~~~~~~---~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~ 422 (490)
.....+.. ..+|++++|+|++.++++++ +.+++|++.
T Consensus 324 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 324 AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 23323332 57899999999999988874 478899875
No 38
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.2e-36 Score=296.05 Aligned_cols=327 Identities=13% Similarity=0.185 Sum_probs=258.3
Q ss_pred eccCCCCCcEEeccccccee-eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCC
Q psy17682 28 FSPRTLTEPVVDLLYHQRRV-GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGG 106 (490)
Q Consensus 28 ~~~~~~~~~~~~l~gH~~~V-~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (490)
|...........+.+|...| .++.++ + .+|++|+.||+|++||+.+++. ...+.
T Consensus 105 w~~~~~~~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~~------------------~~~~~---- 159 (464)
T 3v7d_B 105 WYNPKFVPQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKKF------------------LLQLS---- 159 (464)
T ss_dssp HHCTTCCCEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEE------------------EEEEC----
T ss_pred hcCCCcCcceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCcE------------------EEEEe----
Confidence 33445556778899999885 666664 4 7899999999999999987641 11111
Q ss_pred CcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC--CCCCEEEEE
Q psy17682 107 ANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP--HDDNVIASG 184 (490)
Q Consensus 107 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--~~~~~l~s~ 184 (490)
.+...|.+++|+++. .+++++.+|.+++|++. .+ .....+.+|.+.|.+++|++ ++ .++++|
T Consensus 160 -~h~~~V~~l~~~~~~------~l~s~s~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~ 223 (464)
T 3v7d_B 160 -GHDGGVWALKYAHGG------ILVSGSTDRTVRVWDIK-----KG---CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTG 223 (464)
T ss_dssp -CCSSCEEEEEECSTT------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEEEESSSC-EEEEEE
T ss_pred -CCCcCEEEEEEcCCC------EEEEEeCCCCEEEEECC-----CC---cEEEEECCCCCccEEEEEecCCCC-CEEEEE
Confidence 134468999999874 68889999999999985 22 24567789999999999984 55 899999
Q ss_pred eCCCcEEEEECCCCCccccccc----------------ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTE----------------PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG 248 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~ 248 (490)
+.||+|++||+.++........ ....+.+|...|.++ ++++. ++++|+.|+.|++||++++
T Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM 300 (464)
T ss_dssp ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT
T ss_pred cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC
Confidence 9999999999988765432211 134567788888887 56664 9999999999999999999
Q ss_pred eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682 249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328 (490)
Q Consensus 249 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i 328 (490)
+.+..+.+|...|.+++|+|+++++++++.||.|++||+++++++..+.+|... +.++.|+ +.++++++ .|+.|
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~--~~~l~s~s---~dg~v 374 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLS--DKFLVSAA---ADGSI 374 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEC--SSEEEEEE---TTSEE
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc-EEEEEEc--CCEEEEEe---CCCcE
Confidence 999999999999999999999999999999999999999999999999888875 8999987 57888888 68999
Q ss_pred EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682 329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC 408 (490)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~ 408 (490)
++||+.+... .....+...+..++|+|+++++ ++|+ ||.|++||+.+++.+.... ..+...|.+++|+++ .+
T Consensus 375 ~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l-~~~~-dg~i~iwd~~~g~~~~~~~--~~~~~~v~~v~~~~~-~l 446 (464)
T 3v7d_B 375 RGWDANDYSR---KFSYHHTNLSAITTFYVSDNIL-VSGS-ENQFNIYNLRSGKLVHANI--LKDADQIWSVNFKGK-TL 446 (464)
T ss_dssp EEEETTTCCE---EEEEECTTCCCEEEEEECSSEE-EEEE-TTEEEEEETTTCCEEESCT--TTTCSEEEEEEEETT-EE
T ss_pred EEEECCCCce---eeeecCCCCccEEEEEeCCCEE-EEec-CCeEEEEECCCCcEEehhh--ccCCCcEEEEEecCC-EE
Confidence 9999997653 2333455667888999999988 6776 8999999999998332112 345678999999843 44
Q ss_pred EEee
Q psy17682 409 DVNS 412 (490)
Q Consensus 409 l~~~ 412 (490)
++++
T Consensus 447 ~~~~ 450 (464)
T 3v7d_B 447 VAAV 450 (464)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-36 Score=286.93 Aligned_cols=254 Identities=18% Similarity=0.190 Sum_probs=207.1
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.+...+.+|...|++++|+|++ .+|+||+.|++|++||+.++.
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~------------------------------------ 109 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGT------------------------------------ 109 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSC------------------------------------
T ss_pred cccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc------------------------------------
Confidence 4567899999999999999999 899999999999999998743
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
....+.+|.+.|.+++|+|++ .+|++|+.|++|++||
T Consensus 110 ------------------------------------------~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 110 ------------------------------------------TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWN 146 (343)
T ss_dssp ------------------------------------------EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEE
T ss_pred ------------------------------------------EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEe
Confidence 111356899999999999998 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCC---------CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ---------NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS 265 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---------~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 265 (490)
+... ...... ...+|...|.+++|+|++. .+|++++.|+.|++||. ..+....+.+|...|.+++
T Consensus 147 ~~~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 147 ILGE-CKFSSA----EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp SSSC-EEEECC----TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEE
T ss_pred ccCC-ceeeee----cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEE
Confidence 8732 211111 1235889999999999862 48999999999999994 5677788889999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682 266 WNWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE 344 (490)
Q Consensus 266 ~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~ 344 (490)
|+|++++|++++.||.|++||++.. .....+. +.. .+.+++|+|++.+++++. ++.+++||+.+.........
T Consensus 221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~-~v~~v~~sp~~~~la~~~----d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGS-TINQIAFNPKLQWVAVGT----DQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp ECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSS-CEEEEEECSSSCEEEEEE----SSCEEEEESSSCCSCSEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCC-cEEEEEECCCCCEEEEEC----CCCEEEEEeCCCCCCceEEe
Confidence 9999999999999999999999544 3444432 333 499999999999998775 77899999987654321111
Q ss_pred -----------ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 345 -----------LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 345 -----------~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
..|...+.+++|+|+|++| ++|+.||.|++|++.++
T Consensus 295 ~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 295 EAEPITKAEGQKGKNPQCTSLAWNALGKKL-FAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCCSGGGBTTBCCSCCCEEEEEECSSSCCE-EEEETTSEEEEEEEEEE
T ss_pred ecCcchhhhhhcCCCCceEEEEECCCCCeE-EEecCCceEEEEEEEcc
Confidence 1355679999999999998 78999999999999765
No 40
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-36 Score=320.40 Aligned_cols=215 Identities=12% Similarity=0.097 Sum_probs=172.0
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
.....||.+.|++++|+|++ .+||+|+.||+|+||+....+ ...... ....|.++
T Consensus 10 ~~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~------------------~~~~~~------~~~~V~~l 64 (902)
T 2oaj_A 10 ETNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVE------------------VVIKLE------DRSAIKEM 64 (902)
T ss_dssp EEEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCE------------------EEEECS------SCCCEEEE
T ss_pred cccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcE------------------EEEEcC------CCCCEEEE
Confidence 34466999999999999999 899999999999999976533 111111 12368999
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 196 (490)
+|+|. + .+++++.++.|++|++. .+ ..+..+. |.+.|++++|+|++ .+|++|+.||+|++||++
T Consensus 65 ~fspg---~---~L~S~s~D~~v~lWd~~-----~~---~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 65 RFVKG---I---YLVVINAKDTVYVLSLY-----SQ---KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp EEETT---T---EEEEEETTCEEEEEETT-----TC---SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETT
T ss_pred EEcCC---C---EEEEEECcCeEEEEECC-----CC---cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECC
Confidence 99993 1 57788999999999985 22 2334443 77899999999998 899999999999999998
Q ss_pred CCCcccccccce-----eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC--------------
Q psy17682 197 DGGISRTLTEPV-----VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-------------- 257 (490)
Q Consensus 197 ~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-------------- 257 (490)
+++.. .+..+. ..+.+|.+.|.+++|+|++...+++|+.|+.| +||+++++.+..+..|
T Consensus 129 ~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~ 206 (902)
T 2oaj_A 129 RDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKT 206 (902)
T ss_dssp TTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCT
T ss_pred CCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccc
Confidence 77642 110000 12467999999999999754589999999999 9999999988888765
Q ss_pred ----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682 258 ----PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE 294 (490)
Q Consensus 258 ----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 294 (490)
...|.+++|+|+|++|++++.||+|++||+++++++.
T Consensus 207 ~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 207 NEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp TSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred ccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 4679999999999999999999999999998776543
No 41
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=290.28 Aligned_cols=305 Identities=14% Similarity=0.128 Sum_probs=235.1
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeC---CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGK---EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST 112 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~---D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (490)
....+.+|.+.|++++|+|++..++++|+. |+.|++||+.++.... .... .....
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~----------------~~~~------~~~~~ 67 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL----------------LREI------EKAKP 67 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE----------------EEEE------EESSC
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc----------------eeee------cccCc
Confidence 344568899999999999999677777876 9999999998765210 1111 12346
Q ss_pred CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEE------CCCCCCEEEEEeC
Q psy17682 113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAW------SPHDDNVIASGSE 186 (490)
Q Consensus 113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~------~p~~~~~l~s~~~ 186 (490)
+.+++|+|+..+ ...+++++.+|.+++|++.. ++ .....+.+|.+.|.+++| +|++ .+|++++.
T Consensus 68 v~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~-----~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~ 137 (357)
T 3i2n_A 68 IKCGTFGATSLQ--QRYLATGDFGGNLHIWNLEA-----PE--MPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSR 137 (357)
T ss_dssp EEEEECTTCCTT--TCCEEEEETTSCEEEECTTS-----CS--SCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEET
T ss_pred EEEEEEcCCCCC--CceEEEecCCCeEEEEeCCC-----CC--ccEEEEEecccceEEEeeccccccCCCc-cEEEEEeC
Confidence 889999997210 13577789999999999862 11 245677899999999955 6777 89999999
Q ss_pred CCcEEEEECCCCC-cccccccceeeecc-cccCEEEEE----EeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682 187 DCVVKVWQIPDGG-ISRTLTEPVVDLLY-HQRRVGLVL----WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDI 260 (490)
Q Consensus 187 dg~i~iwd~~~~~-~~~~~~~~~~~~~~-~~~~v~~~~----~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 260 (490)
||.|++||+.+++ ....+.. ..+ +...+.+++ |+|++. ++++++.|+.|++||+++++.... ..|...
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~ 211 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEP----VQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWE-TNIKNG 211 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECC----CTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEE-EECSSC
T ss_pred CCeEEEEeCCCCCCcceeccc----cCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeee-cCCCCc
Confidence 9999999998876 3333321 111 133789998 678885 999999999999999999887554 458899
Q ss_pred EEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeeeee-----ecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEe
Q psy17682 261 VYSASWNW---DGSKLLTTCKDKKMRIINPRTGAIEEEAV-----CHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLR 331 (490)
Q Consensus 261 v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iw 331 (490)
|.+++|+| ++++|++++.||.|++||+++++....+. .|... +.+++|+|++. ++++++ .++.|++|
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~---~dg~i~iw 287 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTAG---GAGGLHLW 287 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC-EEEEEEETTEEEEEEEEE---TTSEEEEE
T ss_pred eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCC-EEEEEECCCCCcEEEEEe---CCCcEEEe
Confidence 99999999 89999999999999999999877655554 67664 99999999998 888888 68999999
Q ss_pred cCCCCCCC-----------------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 332 APDHLDEP-----------------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 332 d~~~~~~~-----------------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
|++..... .......|...|.+++|+|++++|+++++.||.|++||+.+.+
T Consensus 288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred ecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99865433 1222335677899999999999995589999999999998764
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-36 Score=286.60 Aligned_cols=261 Identities=18% Similarity=0.213 Sum_probs=219.7
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+ ...+..+.+|...|.+++|+|++ .+|++|+.|+.|++|++.+....
T Consensus 79 v~iWd~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~------------------------ 132 (340)
T 1got_B 79 LIIWDSYT-TNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGN------------------------ 132 (340)
T ss_dssp EEEEETTT-CCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBS------------------------
T ss_pred EEEEECCC-CCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCc------------------------
Confidence 44455433 34567788999999999999999 89999999999999998763200
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG 184 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~ 184 (490)
......+.+|.+.|.++.|++++ .++++
T Consensus 133 --------------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~--~l~s~ 160 (340)
T 1got_B 133 --------------------------------------------------VRVSRELAGHTGYLSCCRFLDDN--QIVTS 160 (340)
T ss_dssp --------------------------------------------------CEEEEEEECCSSCEEEEEEEETT--EEEEE
T ss_pred --------------------------------------------------ceeEEEecCCCccEEEEEECCCC--cEEEE
Confidence 00112356899999999999865 59999
Q ss_pred eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA 264 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~ 264 (490)
+.|++|++||+++++.... +.+|...|.+++|+|++. ++++|+.|+.|++||+++++.+..+.+|...|.++
T Consensus 161 s~d~~i~~wd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v 232 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTT-------FTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232 (340)
T ss_dssp ETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred ECCCcEEEEECCCCcEEEE-------EcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEE
Confidence 9999999999988865544 556999999999999985 99999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682 265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV 343 (490)
Q Consensus 265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~ 343 (490)
+|+|++++|++++.||+|++||+++++.+..+..+. ...+.+++|+|+|++|++|+ .++.|++||+.+......
T Consensus 233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~---~d~~i~vwd~~~~~~~~~-- 307 (340)
T 1got_B 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY---DDFNCNVWDALKADRAGV-- 307 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEE--
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC---CCCeEEEEEcccCcEeeE--
Confidence 999999999999999999999999988777665322 12489999999999999998 689999999987654322
Q ss_pred eccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682 344 ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE 377 (490)
Q Consensus 344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd 377 (490)
...|...|.+++|+|+|++| ++|+.|+.|++||
T Consensus 308 ~~~h~~~v~~~~~s~dg~~l-~s~s~D~~i~iWd 340 (340)
T 1got_B 308 LAGHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN 340 (340)
T ss_dssp EECCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred eecCCCcEEEEEEcCCCCEE-EEEcCCccEEecC
Confidence 23677889999999999998 8999999999996
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.8e-37 Score=297.00 Aligned_cols=313 Identities=10% Similarity=0.010 Sum_probs=243.5
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.....+.+|.+.|++++|+| .+|++|+.||+|++|++.++...... .....+. .....+.
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~------------~~~~~~~-----~h~~~v~ 66 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPK------------DKSYSHF-----VHKSGLH 66 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGG------------GGEEEEE-----CCTTCEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCC------------CcceEEe-----cCCCcEE
Confidence 34567899999999999998 68999999999999999876521100 0111111 1234688
Q ss_pred eeEeccccc--cceEEEEEeeCCCceEEEECCCCCCCCcccC--CCCcceeecc-----cCCeeEEEEC----CCCCCE-
Q psy17682 115 EITISEDYV--KEFKEEIRKLKSQQALSILPPPSTAPNTGRI--NADHALVGGH-----KGPVLDIAWS----PHDDNV- 180 (490)
Q Consensus 115 ~~~~s~~~~--~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~--~~~~~~~~~h-----~~~V~~~~~~----p~~~~~- 180 (490)
+++|+|+.. ......+++++.+|.|.+|++.. ++. ......+.+| ...|.+++|+ |++ .+
T Consensus 67 ~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~ 140 (397)
T 1sq9_A 67 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITR-----EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHR 140 (397)
T ss_dssp EEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE-----CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEE
T ss_pred EEEEecccccCCccccEEEEEcCCCCEEEEEccC-----CcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceE
Confidence 999998710 00013677888999999999852 111 0015567788 6999999999 988 78
Q ss_pred EEEEeCCCcEEEEECCC------CCcccccccceeee-------cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682 181 IASGSEDCVVKVWQIPD------GGISRTLTEPVVDL-------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT 247 (490)
Q Consensus 181 l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~ 247 (490)
|++++.||.|++||+.+ ++.+.. .+...+ ..|...|.+++|+|++ ++++++.|+.|++||+++
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNW--SPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST 216 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCC--CCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT
T ss_pred EEEEeCCCcEEEEeCCccccccccceeec--cCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC
Confidence 99999999999999988 555441 111123 3488899999999998 899999999999999999
Q ss_pred CeeEEEEec---C---CCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeeeee-------------cCCCcee
Q psy17682 248 GEIMIQIEC---H---PDIVYSASWNWDGSKLLTTCKD---KKMRIINPRTGAIEEEAVC-------------HEGSKAT 305 (490)
Q Consensus 248 ~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~~~~ 305 (490)
++.+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+.. |... +.
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~ 295 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VM 295 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EE
T ss_pred CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-EE
Confidence 999999998 8 9999999999999999999999 9999999999999988887 7665 99
Q ss_pred EEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec----cC---------------CCceeeeeecCCC------
Q psy17682 306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL----DT---------------SNGVMFPLYDPDT------ 360 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~----~~---------------~~~i~~~~~s~~~------ 360 (490)
+++|+|++.+|++++ .++.|++||+++.+....+... .+ ...|.+++|+|++
T Consensus 296 ~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 296 SLSFNDSGETLCSAG---WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp EEEECSSSSEEEEEE---TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred EEEECCCCCEEEEEe---CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 999999999999998 6899999999986543333300 33 6789999999998
Q ss_pred ----CeEEEEecCCCeEEEEEecCCC
Q psy17682 361 ----NLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 361 ----~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
++| ++|+.||.|++|++.+++
T Consensus 373 ~~~~~~l-~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 373 ADLNESL-CCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTSCEE-EEEETTTEEEEEEEEC--
T ss_pred ccccceE-EEecCCCcEEEEEcCCCC
Confidence 566 889999999999998763
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=303.08 Aligned_cols=326 Identities=13% Similarity=0.186 Sum_probs=250.5
Q ss_pred eeeeccCCCC--CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682 25 LTYFSPRTLT--EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG 102 (490)
Q Consensus 25 ~~~~~~~~~~--~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (490)
+..|+..... +++. ..+|...|++++|+|++ .+|++|+.||.|++||+....... .....+.
T Consensus 47 v~iw~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~~--------------~~~~~~~ 110 (416)
T 2pm9_A 47 LELWSLLAADSEKPIA-SLQVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAI--------------NSMARFS 110 (416)
T ss_dssp CEEEESSSGGGCSCSC-CCCCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSCC--------------CEEEECC
T ss_pred EEEEEccCCCCCcEEE-EEecCCceEEEEECCCC-CeEEEEccCCeEEEeecccccccc--------------cchhhcc
Confidence 4556654432 2333 34699999999999999 899999999999999998732100 1111111
Q ss_pred CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc-CCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682 103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR-INADHALVGGHKGPVLDIAWSPHDDNVI 181 (490)
Q Consensus 103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~p~~~~~l 181 (490)
.+...+.+++|+|+.. ..+++++.++.|++|++......... .......+.+|...|.+++|+|+++.+|
T Consensus 111 -----~h~~~v~~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 111 -----NHSSSVKTVKFNAKQD----NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp -----CSSSCCCEEEECSSST----TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred -----CCccceEEEEEcCCCC----CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 1334689999998731 25777899999999999632210000 1112233568999999999999955899
Q ss_pred EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC---cEEEEECCCC-eeEEEEe-c
Q psy17682 182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NVAIWNVGTG-EIMIQIE-C 256 (490)
Q Consensus 182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v~iwd~~~~-~~~~~~~-~ 256 (490)
++++.||.|++||+++++....+.... ...+|...|.+++|+|++..++++++.|+ .|++||++++ +++..+. +
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~ 260 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTS-PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG 260 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCC-CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccc-cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC
Confidence 999999999999999887665543210 01223789999999999867999999998 9999999986 6777777 8
Q ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCC
Q psy17682 257 HPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 257 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~ 334 (490)
|...|.+++|+| ++++|++++.|+.|++||+++++++..+..|... +.+++|+|++ .+|++++ .|+.|++||+.
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~---~d~~i~iw~~~ 336 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-CFKTKFAPEAPDLFACAS---FDNKIEVQTLQ 336 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-CCCEEECTTCTTEEEECC---SSSEEEEEESC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-eEEEEECCCCCCEEEEEe---cCCcEEEEEcc
Confidence 999999999999 8999999999999999999999999999888775 9999999998 8999988 68999999998
Q ss_pred CCCCCeEEEe------------c---c------------------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 335 HLDEPIVMVE------------L---D------------------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 335 ~~~~~~~~~~------------~---~------------------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
.......... + . +...+..++|+|+|++| ++|+.|+.|+||++.++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l-a~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 337 NLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLV-QITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEE-CBCTTSSCBCCBCCCCC
T ss_pred CCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEE-EEeCCCCeEEEEEeccC
Confidence 7654322110 0 0 34557789999999998 88999999999999865
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.5e-36 Score=282.54 Aligned_cols=294 Identities=16% Similarity=0.163 Sum_probs=240.9
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
......+|.+.|++++|+|++ .+|++++ ||.|++||+.++..... .. ... .......+.+
T Consensus 43 ~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~--------------~~-~~~---~~~~~~~v~~ 102 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSP--------------VS-QLD---CLNRDNYIRS 102 (337)
T ss_dssp EEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSC--------------SE-EEE---CSCTTSBEEE
T ss_pred ccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceee--------------ee-ccc---ccCCCCcEEE
Confidence 344556899999999999999 8899888 99999999987642110 00 000 0012346889
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~ 195 (490)
++|+|+. ..+++++.++.+.+|++.. ++ ......+.+|...|.+++|+|++ .++++++.||.|++||+
T Consensus 103 ~~~~~~~-----~~l~~~~~d~~i~~~d~~~-----~~-~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 103 CKLLPDG-----CTLIVGGEASTLSIWDLAA-----PT-PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp EEECTTS-----SEEEEEESSSEEEEEECCC-----C---EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred EEEcCCC-----CEEEEEcCCCcEEEEECCC-----CC-cceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeC
Confidence 9999985 3567788999999999862 11 11345677899999999999988 89999999999999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT 275 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 275 (490)
++++.... +..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++
T Consensus 171 ~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 171 HNQTLVRQ-------FQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp TTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred CCCceeee-------eecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE
Confidence 88765544 445899999999999985 99999999999999999999888876 7888999999999999999
Q ss_pred EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682 276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL 355 (490)
Q Consensus 276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 355 (490)
++.++.|++||+++++.. .+..|... +..++|+|++++|++++ .++.|++||+.+.+.. ....+...+.+++
T Consensus 242 ~~~~~~i~~~~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~---~dg~i~~~~~~~~~~~---~~~~~~~~v~~~~ 313 (337)
T 1gxr_A 242 GMESSNVEVLHVNKPDKY-QLHLHESC-VLSLKFAYCGKWFVSTG---KDNLLNAWRTPYGASI---FQSKESSSVLSCD 313 (337)
T ss_dssp EETTSCEEEEETTSSCEE-EECCCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEE---EEEECSSCEEEEE
T ss_pred EcCCCcEEEEECCCCCeE-EEcCCccc-eeEEEECCCCCEEEEec---CCCcEEEEECCCCeEE---EEecCCCcEEEEE
Confidence 999999999999988754 45566654 99999999999999998 6899999999986532 3345678899999
Q ss_pred ecCCCCeEEEEecCCCeEEEEEec
Q psy17682 356 YDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 356 ~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
|+|++++| ++++.||.|++|++.
T Consensus 314 ~s~~~~~l-~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 314 ISVDDKYI-VTGSGDKKATVYEVI 336 (337)
T ss_dssp ECTTSCEE-EEEETTSCEEEEEEE
T ss_pred ECCCCCEE-EEecCCCeEEEEEEe
Confidence 99999998 788899999999974
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=280.13 Aligned_cols=295 Identities=15% Similarity=0.165 Sum_probs=238.0
Q ss_pred eccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCC
Q psy17682 28 FSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGA 107 (490)
Q Consensus 28 ~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (490)
+++....++...+.+|.+.|++++| |++ .+|++|+.||.|++||+.++.
T Consensus 2 ~d~~~~~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~----------------------------- 50 (313)
T 3odt_A 2 IDPFTGYQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW----------------------------- 50 (313)
T ss_dssp ---CCCCEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE-----------------------------
T ss_pred CCccccHHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE-----------------------------
Confidence 4566666788899999999999999 888 889999999999999986532
Q ss_pred cccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682 108 NRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED 187 (490)
Q Consensus 108 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d 187 (490)
....+..|.+.|.+++|+|++ .+|++++.|
T Consensus 51 -------------------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 80 (313)
T 3odt_A 51 -------------------------------------------------LGTVVYTGQGFLNSVCYDSEK-ELLLFGGKD 80 (313)
T ss_dssp -------------------------------------------------EEEEEEECSSCEEEEEEETTT-TEEEEEETT
T ss_pred -------------------------------------------------EEEEeecCCccEEEEEECCCC-CEEEEecCC
Confidence 011345788999999999988 899999999
Q ss_pred CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN 267 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 267 (490)
|.|++|++....... +...+.+|...|.++.| ++ .++++++.|+.|++|| .++.+..+..|...+.+++|+
T Consensus 81 g~i~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 81 TMINGVPLFATSGED----PLYTLIGHQGNVCSLSF--QD-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp SCEEEEETTCCTTSC----C-CEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred CeEEEEEeeecCCCC----cccchhhcccCEEEEEe--cC-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence 999999987654322 22346679999999999 34 4899999999999999 677888888999999999999
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 268 W-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 268 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
| +++.+++++.||.|++|| ..+....+.......+.+++|+|++. +++++ .++.|++||+++.+....+ ..
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~---~dg~i~i~d~~~~~~~~~~--~~ 223 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS---NDGLIKLVDMHTGDVLRTY--EG 223 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEE---TTSEEEEEETTTCCEEEEE--EC
T ss_pred cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEcc---CCCeEEEEECCchhhhhhh--hc
Confidence 8 899999999999999999 44566666663334599999999999 66776 6899999999986533222 25
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCC
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSG 425 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~ 425 (490)
|...+.+++|+|++ .+ ++++.||.|++||+.+++.. ..+. .+..+|.+++|+|++.+++++ ++.+++|++.++.
T Consensus 224 ~~~~i~~~~~~~~~-~l-~~~~~dg~v~iwd~~~~~~~-~~~~--~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DI-VSCGEDRTVRIWSKENGSLK-QVIT--LPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CSSCEEEEEECTTS-CE-EEEETTSEEEEECTTTCCEE-EEEE--CSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred CCceEEEEEEecCC-CE-EEEecCCEEEEEECCCCcee-EEEe--ccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 67789999999999 45 68889999999999998732 2222 344689999999999876655 5588999998876
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.2e-36 Score=332.54 Aligned_cols=342 Identities=12% Similarity=0.154 Sum_probs=276.7
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
......+.+|.+.|++++|+|++ .+|++|+.||+|++||+.++.. ...+. .+...|
T Consensus 605 ~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~------------------~~~~~-----~h~~~v 660 (1249)
T 3sfz_A 605 NLSRLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEK------------------LLDIK-----AHEDEV 660 (1249)
T ss_dssp CCCSEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE------------------EEEEC-----CCSSCE
T ss_pred ccceEEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCE------------------EEEec-----cCCCCE
Confidence 44556789999999999999999 8999999999999999988651 11111 133468
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC-CCEEEEEeCCCcEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD-DNVIASGSEDCVVKV 192 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-~~~l~s~~~dg~i~i 192 (490)
.+++|+|+. ..+++++.++.|++|++. . ......+.+|.+.|.+++|+|++ ..++++|+.||.|++
T Consensus 661 ~~~~~s~~~-----~~l~s~~~d~~v~vwd~~-----~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 661 LCCAFSSDD-----SYIATCSADKKVKIWDSA-----T---GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp EEEEECTTS-----SEEEEEETTSEEEEEETT-----T---CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred EEEEEecCC-----CEEEEEeCCCeEEEEECC-----C---CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 899999985 367788899999999985 2 23566788999999999999953 268999999999999
Q ss_pred EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----------------
Q psy17682 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE----------------- 255 (490)
Q Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----------------- 255 (490)
||+.+++.... +.+|...|.+++|+|++. ++++++.||.|++||+++++....+.
T Consensus 728 wd~~~~~~~~~-------~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 728 WDLNQKECRNT-------MFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp EETTSSSEEEE-------ECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred EECCCcchhhe-------ecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 99998876554 456999999999999995 99999999999999987765433321
Q ss_pred --------------------------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682 256 --------------------------------------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV 297 (490)
Q Consensus 256 --------------------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 297 (490)
+|...|.+++|+|+++++++++.||.|++||+.++..+..+.
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 567789999999999999999999999999999999999888
Q ss_pred ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----------------------------------------
Q psy17682 298 CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD---------------------------------------- 337 (490)
Q Consensus 298 ~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~---------------------------------------- 337 (490)
+|... +.+++|+|+|..+++++ .|+.+++|++....
T Consensus 880 ~h~~~-v~~v~~spdg~~l~s~s---~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 880 GHLSW-VHGVMFSPDGSSFLTAS---DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp CCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred CCccc-eEEEEECCCCCEEEEEe---CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 88875 99999999999999988 67888888753200
Q ss_pred -------------------------------------CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 338 -------------------------------------EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 338 -------------------------------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
.........|...|.+++|+|+|+++ ++++.||.|++||+.+
T Consensus 956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTL-ISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp EEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCE-EEECSSSBEEEEETTT
T ss_pred EEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEE-EEEcCCCEEEEEECCC
Confidence 00011112456678999999999998 7899999999999998
Q ss_pred CCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCCceEE
Q psy17682 381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSGLCQV 429 (490)
Q Consensus 381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~ 429 (490)
++ ......+...+.+++|+|++.+++.+ ++.+++|++.++.....
T Consensus 1035 ~~----~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1035 GD----YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp TE----EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEE
T ss_pred Cc----eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEE
Confidence 86 33344566789999999998876665 56899999988774443
No 48
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=289.64 Aligned_cols=258 Identities=21% Similarity=0.302 Sum_probs=208.1
Q ss_pred ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI 118 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (490)
...+|.+.|.+++|+|++ .+|++|+.|++|++|+...+..
T Consensus 56 ~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~--------------------------------------- 95 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDF--------------------------------------- 95 (345)
T ss_dssp ECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-E---------------------------------------
T ss_pred eccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCe---------------------------------------
Confidence 457999999999999999 8999999999999999865320
Q ss_pred ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
.....+.+|.+.|.+++|+|++ ++|++|+.|++|++||+.++
T Consensus 96 -------------------------------------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 96 -------------------------------------ECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp -------------------------------------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTT
T ss_pred -------------------------------------EEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCC
Confidence 0112456899999999999988 89999999999999999876
Q ss_pred CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWDGSKLLTT 276 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~ 276 (490)
.... ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++++|+++
T Consensus 138 ~~~~----~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 138 DEYE----CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp SCEE----EEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCeE----EEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 5422 1234667999999999999995 89999999999999998875 446788999999999999999999999
Q ss_pred eCCCeEEEEeCCCC---------------ceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC-
Q psy17682 277 CKDKKMRIINPRTG---------------AIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP- 339 (490)
Q Consensus 277 ~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~- 339 (490)
+.|++|++||.... +++..+.+ |.. .+..++|+|++..|++++ .|+.|++|+......+
T Consensus 213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~---~d~~i~vw~~~~~~~~~ 288 (345)
T 3fm0_A 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSR-TIYDIAWCQLTGALATAC---GDDAIRVFQEDPNSDPQ 288 (345)
T ss_dssp ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSS-CEEEEEECTTTCCEEEEE---TTSCEEEEEECTTSCTT
T ss_pred eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCC-cEEEEEEecCCCEEEEEe---CCCeEEEEEeCCCCCcc
Confidence 99999999996432 12333444 444 599999999999999998 6889999998754321
Q ss_pred ---eEE--E-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 340 ---IVM--V-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 340 ---~~~--~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
... . ...|...|.+++|+|++..++++|+.||.|++|++.++++
T Consensus 289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 111 1 1256778999999999864458999999999999998873
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-37 Score=307.03 Aligned_cols=351 Identities=8% Similarity=-0.013 Sum_probs=242.2
Q ss_pred CcEEecccccceeeeEEeccCCC--------ceE-------------------EeeeCCCeEEEEeCCCCCCCCCCCccc
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQ--------NVL-------------------LTAGKEAEPILISLKDGYIPPSEKSKS 87 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~--------~~l-------------------~s~~~D~~v~iWd~~~~~~~~~~~~~~ 87 (490)
........+.+.|.+|+|+|++. .+| +|++.|++|+||++.++....
T Consensus 124 ~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~------ 197 (524)
T 2j04_B 124 KRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHC------ 197 (524)
T ss_dssp CSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCE------
T ss_pred CcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCc------
Confidence 33343444788999999999861 344 446688999999987654210
Q ss_pred cceeccccceeecccCCCCCcccccCCeeEecccccc-ceEEEEEeeCCCceEEEECCCCCCCCcc---cCCCCcceeec
Q psy17682 88 ALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK-EFKEEIRKLKSQQALSILPPPSTAPNTG---RINADHALVGG 163 (490)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~~~~~~~~~~~g~i~v~~~~~~~~~~~---~~~~~~~~~~~ 163 (490)
.....+.+ ....+..++|+|+... .....+++++.||.|++|++........ ........+.+
T Consensus 198 --------~~~~~l~~-----~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 198 --------VKVQTIVH-----SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp --------EEEEEEEE-----CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred --------eEEEEEEe-----cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 00010111 1225788999997210 0124688899999999999963221100 11223456789
Q ss_pred ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEE--EEeeCCCCEEEEEeCCCcEE
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLV--LWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~l~s~~~dg~v~ 241 (490)
|...|++++|+|+ ..|++|+.||+|++||++++.. +...+.+|...|.++ .|+|++.++|++|+.|++|+
T Consensus 265 h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~------~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 265 ADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEV------PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp TTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSS------CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred CCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCC------ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 9999999999984 4899999999999999987632 223356799999999 56777635999999999999
Q ss_pred EEECCCCeeEEEEecCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 242 IWNVGTGEIMIQIECHPD--IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 242 iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
|||+++++.+..+.+|.. .|.+++|+|+++.+++++.|++|++||++++.++.++.+|.+. +.+++|+|+|.+|++|
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~-V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT-ITAIGVSRLHPMVLAG 415 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC-EEEEECCSSCCBCEEE
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc-eEEEEeCCCCCeEEEE
Confidence 999998887766766643 5889999999999999999999999999999988888888876 9999999999999999
Q ss_pred eCCCceeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec-CCCCeeEEeeeeeCCC
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT-AEPPFVHYINTFQTPD 395 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~~~ 395 (490)
+ .|++|++||+.... ..... .......+..++|+|+++.+ . ...+ +.+|+.. ++. . ......+..
T Consensus 416 s---~Dgtv~lwd~~~~~-~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~-~~~~--~~~~~~~~~g~-~--~~~l~gh~~ 484 (524)
T 2j04_B 416 S---ADGSLIITNAARRL-LHGIKNSSATQKSLRLWKWDYSIKDDKY-R-IDSS--YEVYPLTVNDV-S--KAKIDAHGI 484 (524)
T ss_dssp E---TTTEEECCBSCSST-TTCC------CCCCEEEECBCCSSSCEE-E-ECCC--CCCCC----------------CCC
T ss_pred E---CCCEEEEEechHhh-ccccccCccceeeeEEEEeccCCCCCeE-E-ccCC--ceecccccCCc-c--eeeecCCCc
Confidence 8 79999999987532 11111 01122247799999999855 2 2222 3344333 222 1 122234567
Q ss_pred ceeeEEEeeCce---eEEee--cceeEEEEecCC
Q psy17682 396 PQRGIGMMPKRG---CDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 396 ~i~~~~~sp~~~---~l~~~--~~~~~~~~~~~~ 424 (490)
+|.+|+|+|++. +++++ ++.+|+|++...
T Consensus 485 ~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 485 NITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp SCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 999999999964 77777 458999998754
No 50
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=286.61 Aligned_cols=273 Identities=17% Similarity=0.258 Sum_probs=199.8
Q ss_pred eeeeccCCCC-CcEEec-cc-ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682 25 LTYFSPRTLT-EPVVDL-LY-HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV 101 (490)
Q Consensus 25 ~~~~~~~~~~-~~~~~l-~g-H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (490)
+..|+..... .....+ .+ |.+.|.+++|+|++ .+|++|+.|++|+|||+.......
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~-------------------- 94 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRT-------------------- 94 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------------------
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCcc--------------------
Confidence 4445554322 233344 44 99999999999999 899999999999999986422000
Q ss_pred cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682 102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI 181 (490)
Q Consensus 102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l 181 (490)
. .......+.+|.+.|.+++|+|++ ++|
T Consensus 95 ------------------------------------------------~---~~~~~~~~~~h~~~V~~v~~sp~g-~~l 122 (330)
T 2hes_X 95 ------------------------------------------------F---EMDLLAIIEGHENEVKGVAWSNDG-YYL 122 (330)
T ss_dssp ------------------------------------------------C---CCEEEEEEC----CEEEEEECTTS-CEE
T ss_pred ------------------------------------------------c---cceeEEEEcCCCCcEEEEEECCCC-CEE
Confidence 0 000123467899999999999998 899
Q ss_pred EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC--eeEEEEecCCC
Q psy17682 182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG--EIMIQIECHPD 259 (490)
Q Consensus 182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~ 259 (490)
++|+.|++|++||+....... .....+.+|...|.+++|+|++. +|++|+.|++|++||..++ +++..+.+|..
T Consensus 123 as~s~D~~v~iwd~~~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~ 198 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEY---ECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEG 198 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCC---EEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred EEEeCCCEEEEEeccCCCCCe---EEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCC
Confidence 999999999999995432111 12334667999999999999985 9999999999999998776 57788899999
Q ss_pred cEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCC--------ceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682 260 IVYSASWNWD--GSKLLTTCKDKKMRIINPRTG--------AIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQY 328 (490)
Q Consensus 260 ~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i 328 (490)
.|.+++|+|+ +..|++++.|++|++||++.+ .+...+.. |.. .+.+++|++++ +|++++ .|+.|
T Consensus 199 ~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~~-~l~s~~---~dg~v 273 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKR-QVYNVAWGFNG-LIASVG---ADGVL 273 (330)
T ss_dssp CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSS-CEEEEEECTTS-CEEEEE---TTSCE
T ss_pred cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccccc-ceEEEEEcCCC-EEEEEe---CCCEE
Confidence 9999999998 678999999999999998754 23333433 555 49999999776 566676 68999
Q ss_pred EEecCCCCCCCeEE-EeccCCC-ceeeeeecC--CCCeEEEEecCCCeEEEEEecC
Q psy17682 329 SLRAPDHLDEPIVM-VELDTSN-GVMFPLYDP--DTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 329 ~iwd~~~~~~~~~~-~~~~~~~-~i~~~~~s~--~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
++||...+...... ....|.. .|.+++|+| ++++| ++|+.||.|++|++..
T Consensus 274 ~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l-as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL-ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE-EEEETTSEEEEEEC--
T ss_pred EEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE-EEecCCCcEEEEEecc
Confidence 99998764311111 2234554 799999999 67777 8999999999999865
No 51
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-35 Score=290.55 Aligned_cols=325 Identities=15% Similarity=0.190 Sum_probs=257.2
Q ss_pred CcEEeccccccee-eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 35 EPVVDLLYHQRRV-GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 35 ~~~~~l~gH~~~V-~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
.+...+.||.+.| .++. +++ .+|++|+.||+|++||+.++.. ...+. .+...+
T Consensus 109 ~~~~~l~~h~~~v~~~~~--~~g-~~l~sg~~dg~i~vwd~~~~~~------------------~~~~~-----~h~~~v 162 (445)
T 2ovr_B 109 KSPKVLKGHDDHVITCLQ--FCG-NRIVSGSDDNTLKVWSAVTGKC------------------LRTLV-----GHTGGV 162 (445)
T ss_dssp CCCEEEECSTTSCEEEEE--EET-TEEEEEETTSCEEEEETTTCCE------------------EEECC-----CCSSCE
T ss_pred ceeEEecccCCCcEEEEE--EcC-CEEEEEECCCcEEEEECCCCcE------------------EEEEc-----CCCCCE
Confidence 4557799999975 5544 456 8999999999999999987651 11111 123357
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
.+++++++ .+++++.+|.+++|++. .+ .....+.+|...|.+++|++ ..+++|+.||+|++|
T Consensus 163 ~~~~~~~~-------~l~s~~~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~w 224 (445)
T 2ovr_B 163 WSSQMRDN-------IIISGSTDRTLKVWNAE-----TG---ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVW 224 (445)
T ss_dssp EEEEEETT-------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEE
T ss_pred EEEEecCC-------EEEEEeCCCeEEEEECC-----cC---cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEE
Confidence 78888754 68889999999999985 22 24567789999999999963 689999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
|+.+++.... +.+|...|.+++| ++ .++++|+.||.|++||+++++.+..+.+|...|.+++| ++.++
T Consensus 225 d~~~~~~~~~-------~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 225 DIETGQCLHV-------LMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp ESSSCCEEEE-------EECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEE
T ss_pred ECCCCcEEEE-------EcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEE
Confidence 9998876554 4569999999999 45 48999999999999999999999999999999999999 78999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCcee
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVM 352 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~ 352 (490)
++++.||.|++||+++++.+..+..|... +.++.+ ++.++++|+ .++.|++||+++++....+... .+...|.
T Consensus 293 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~--~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 293 VSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMEL--KDNILVSGN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCCEEEEECSTTSCSSCEE
T ss_pred EEEeCCCeEEEEECCCCCEEEEEcCCccc-EEEEEE--eCCEEEEEe---CCCeEEEEECCCCcEEEEEccCCCCCCCEE
Confidence 99999999999999999999998887764 666666 467888888 6899999999876643333221 2667799
Q ss_pred eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee--eeeCCCceeeEEEeeCceeEEeecce------eEEEEecCC
Q psy17682 353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN--TFQTPDPQRGIGMMPKRGCDVNSCEI------GRFFRLNNS 424 (490)
Q Consensus 353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~~~------~~~~~~~~~ 424 (490)
+++|+ ++++ ++|+.||.|++||+.+++....... ...+...|.+++|+|++.++++++.+ +.+|++...
T Consensus 367 ~~~~~--~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 367 CLQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEC--CCEE-EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99996 5676 7899999999999999873322211 12455789999999999998887542 567776653
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=296.47 Aligned_cols=305 Identities=13% Similarity=0.079 Sum_probs=233.1
Q ss_pred CCcEEec-ccccceeeeEEecc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682 34 TEPVVDL-LYHQRRVGLVLWHP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS 111 (490)
Q Consensus 34 ~~~~~~l-~gH~~~V~~v~~~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (490)
.+++..+ .+|.+.|++++|+| ++ .+|+||+.||+|+|||+.+....
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~------------------------------- 99 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVG------------------------------- 99 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTT-------------------------------
T ss_pred ceEEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccC-------------------------------
Confidence 4567777 99999999999999 77 89999999999999998652100
Q ss_pred cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK 191 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~ 191 (490)
........ .+|.+.|.+++|+|++ .+|++|+.||+|+
T Consensus 100 -----------------------------------------~~~~~~~~-~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~ 136 (437)
T 3gre_A 100 -----------------------------------------EVYSSSLT-YDCSSTVTQITMIPNF-DAFAVSSKDGQII 136 (437)
T ss_dssp -----------------------------------------CCCSCSEE-EECSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred -----------------------------------------cccceeee-ccCCCCEEEEEEeCCC-CEEEEEeCCCEEE
Confidence 00000111 2589999999999987 8999999999999
Q ss_pred EEECC---CCCccccccc-ceeeec--c--cccCEEEEE--EeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--CCC
Q psy17682 192 VWQIP---DGGISRTLTE-PVVDLL--Y--HQRRVGLVL--WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--HPD 259 (490)
Q Consensus 192 iwd~~---~~~~~~~~~~-~~~~~~--~--~~~~v~~~~--~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~ 259 (490)
+||+. +++....... +...+. . +...+.++. +++++ .+|++|+.|+.|++||+++++.+..+.. |..
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 99995 5544432221 111111 1 556777777 45777 4999999999999999999999999987 889
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEe----CCCcEEEEEeCCCceeEEEEecCC
Q psy17682 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYL----KSGLIFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~~i~iwd~~ 334 (490)
.|++++|+|++++|++++.||.|++||+++++++..+. .|.. .+.+++|+ +++.+|++|+ .|+.|++||++
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~s~~~~~l~s~~---~dg~i~iwd~~ 291 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA-PITHVEVCQFYGKNSVIVVGGS---SKTFLTIWNFV 291 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE-EEEEEEECTTTCTTEEEEEEES---TTEEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC-ceEEEEeccccCCCccEEEEEc---CCCcEEEEEcC
Confidence 99999999999999999999999999999999888876 4444 58999665 4688999998 79999999999
Q ss_pred CCCCCeEEEec------------------------cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682 335 HLDEPIVMVEL------------------------DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT 390 (490)
Q Consensus 335 ~~~~~~~~~~~------------------------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~ 390 (490)
++.....+... .+...|.+++|+ ++++| ++|+.|+.|++||+.+++........
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL-LTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE-EEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE-EecCCCCeEEEEECCCcccceEEecc
Confidence 76644333311 144558888999 67776 89999999999999987643222110
Q ss_pred ----------------------------------eeCCCceeeEEEeeC--ceeEEeec--ceeEEEE
Q psy17682 391 ----------------------------------FQTPDPQRGIGMMPK--RGCDVNSC--EIGRFFR 420 (490)
Q Consensus 391 ----------------------------------~~~~~~i~~~~~sp~--~~~l~~~~--~~~~~~~ 420 (490)
..|...|++++|+++ +.++++++ +.+++|+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 015678999999998 77888885 4677774
No 53
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-36 Score=315.73 Aligned_cols=366 Identities=10% Similarity=0.041 Sum_probs=243.0
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+. +.+..+. |.+.|++++|+|++ .+|++|+.||+|++||+.++.... ..+. ...... .
T Consensus 81 v~lWd~~~~-~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~-------~~i~---~~~~~~--~ 145 (902)
T 2oaj_A 81 VYVLSLYSQ-KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSS-------FKLD---NLQKSS--F 145 (902)
T ss_dssp EEEEETTTC-SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEE-------EEEC---CHHHHH--T
T ss_pred EEEEECCCC-cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcccc-------ceec---cccccc--c
Confidence 445555432 3444454 77899999999999 899999999999999998754210 0000 000000 0
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee------------------ecccC
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV------------------GGHKG 166 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~------------------~~h~~ 166 (490)
....+...|.+++|+|+. ...++++..+|.+ +|++.. ++ ....+ .+|..
T Consensus 146 ~~~~h~~~V~sl~~sp~~----~~~l~~g~~dg~v-lWd~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRD----IGTVLISYEYVTL-TYSLVE-----NE---IKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp CSSSCCCCCCEEEEETTE----EEEEEEECSSCEE-EEETTT-----TE---EEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred ccccCCCCeEEEEEccCC----CCEEEEEeCCCcE-EEECCC-----Cc---eEEEEecccCCcCCCcccccccccccCC
Confidence 111234579999999963 3467789999999 999852 11 12222 34578
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc--cc-----cceee-ec---ccccCEEEEEEee----CCCCEE
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT--LT-----EPVVD-LL---YHQRRVGLVLWHP----TAQNVL 231 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~-----~~~~~-~~---~~~~~v~~~~~~p----~~~~~l 231 (490)
.|.+++|+|+| .+|++|+.||+|++||+++++.+.. +. .+... .. .|...|.+++|++ ++..++
T Consensus 213 ~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll 291 (902)
T 2oaj_A 213 KVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLL 291 (902)
T ss_dssp CEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEE
T ss_pred CeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEE
Confidence 89999999998 8999999999999999988876432 10 00000 00 1234566666643 211244
Q ss_pred EEE----------------------------------------------------------------------------e
Q psy17682 232 LTA----------------------------------------------------------------------------G 235 (490)
Q Consensus 232 ~s~----------------------------------------------------------------------------~ 235 (490)
++| +
T Consensus 292 ~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s 371 (902)
T 2oaj_A 292 ISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL 371 (902)
T ss_dssp EEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE
T ss_pred EeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEc
Confidence 444 3
Q ss_pred CCCcEEEEECCCCeeEEE-----------------------------------------EecCCCcEEEEEEcCCCCEEE
Q psy17682 236 SDNNVAIWNVGTGEIMIQ-----------------------------------------IECHPDIVYSASWNWDGSKLL 274 (490)
Q Consensus 236 ~dg~v~iwd~~~~~~~~~-----------------------------------------~~~~~~~v~~~~~~~~~~~l~ 274 (490)
.|+.|++||+.++..... +.+|...+.+++|+|++++|+
T Consensus 372 ~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la 451 (902)
T 2oaj_A 372 GNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI 451 (902)
T ss_dssp TTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE
T ss_pred CCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE
Confidence 445555565544422111 112223333445578899999
Q ss_pred EEeCCCeEEEEeCCCCcee--eeee---------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC----
Q psy17682 275 TTCKDKKMRIINPRTGAIE--EEAV---------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP---- 339 (490)
Q Consensus 275 ~~~~dg~i~iwd~~~~~~~--~~~~---------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~---- 339 (490)
+|+.|++|++||+.++... ..+. +|... +.+++|+|+|++||+|+ .|++|++||+.+.+..
T Consensus 452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~-V~svafspdg~~LAsgs---~DgtV~lwd~~~~~~~~~~~ 527 (902)
T 2oaj_A 452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA-VDKISFAAETLELAVSI---ETGDVVLFKYEVNQFYSVEN 527 (902)
T ss_dssp EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC-EEEEEEETTTTEEEEEE---TTSCEEEEEEEECCC-----
T ss_pred EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc-eeEEEecCCCCeEEEEe---cCcEEEEEEecCccccCccc
Confidence 9999999999999887532 1111 45554 99999999999999999 7999999999765210
Q ss_pred --------------------------------------eEEE-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 340 --------------------------------------IVMV-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 340 --------------------------------------~~~~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
.... ...|...|++++||||| +| |+|+.|++|++||+.+
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~l-Asgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 528 RPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FV-GIAYAAGSLMLIDRRG 605 (902)
T ss_dssp ----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EE-EEEETTSEEEEEETTT
T ss_pred cCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EE-EEEeCCCcEEEEECCC
Confidence 0111 22477889999999999 77 8999999999999877
Q ss_pred CCCeeE-Eeeee--eCCCceeeEEEe-----eCc---eeEEee--cceeEEEEe---cCCC
Q psy17682 381 EPPFVH-YINTF--QTPDPQRGIGMM-----PKR---GCDVNS--CEIGRFFRL---NNSG 425 (490)
Q Consensus 381 ~~~~~~-~~~~~--~~~~~i~~~~~s-----p~~---~~l~~~--~~~~~~~~~---~~~~ 425 (490)
...+.. .+..+ .|...|++++|+ ||| .+++++ ++.+++|++ .+++
T Consensus 606 ~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 606 PAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp TEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred CeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 652111 12223 455789999999 885 788877 558999999 6666
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-35 Score=283.60 Aligned_cols=283 Identities=16% Similarity=0.281 Sum_probs=224.6
Q ss_pred cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec------------------ccCCeeEE
Q psy17682 110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG------------------HKGPVLDI 171 (490)
Q Consensus 110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~------------------h~~~V~~~ 171 (490)
...|.+++|+|++ + .++++ .++.+.+|+... ++ ....+.+ +...|.++
T Consensus 64 ~~~V~~v~fspdg--~---~la~g-~~~~v~i~~~~~-----g~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 64 TSVVCCVKFSNDG--E---YLATG-CNKTTQVYRVSD-----GS---LVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp SSCCCEEEECTTS--S---EEEEE-CBSCEEEEETTT-----CC---EEEEECC-----------------CCCCBEEEE
T ss_pred CCEEEEEEECCCC--C---EEEEE-cCCcEEEEEecC-----CC---EEEEecCccccccccccccccccCCCceeEEEE
Confidence 4468999999995 2 33444 478999998852 11 1222222 23359999
Q ss_pred EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE
Q psy17682 172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM 251 (490)
Q Consensus 172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 251 (490)
+|+|++ .+|++|+.|++|++||+.+++.... +.+|...|.+++|+|++. +|++++.|++|++||+++++..
T Consensus 130 ~~s~dg-~~l~s~~~d~~i~iwd~~~~~~~~~-------~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 130 CFSPDG-KFLATGAEDRLIRIWDIENRKIVMI-------LQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EECTTS-SEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEE
T ss_pred EECCCC-CEEEEEcCCCeEEEEECCCCcEEEE-------EccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeE
Confidence 999998 8999999999999999988765443 556999999999999995 9999999999999999999988
Q ss_pred EEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeee-------eecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682 252 IQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEA-------VCHEGSKATRAIYLKSGLIFTTGFSKM 323 (490)
Q Consensus 252 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~s~~~~~l~~~~~~~ 323 (490)
..+. +...+.+++|+| ++++|++++.|+.|++||+++++.+..+ .+|... +.+++|+|+|++|++|+
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s--- 275 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQSVVSGS--- 275 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC-EEEEEECTTSSEEEEEE---
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC-EEEEEECCCCCEEEEEe---
Confidence 8777 667899999999 8999999999999999999999887766 355554 99999999999999998
Q ss_pred ceeEEEEecCCCCCCC----------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682 324 SERQYSLRAPDHLDEP----------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT 393 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~----------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 393 (490)
.|+.|++||+++.... .......|...|.+++|+|++++| ++|+.|+.|++||+.+++++ ..+. .|
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~-~~l~--~h 351 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPL-LMLQ--GH 351 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEE-EEEE--CC
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEE-EEEC--CC
Confidence 7999999999864321 112233577789999999999998 79999999999999998743 2222 35
Q ss_pred CCceeeEEEee------CceeEEee--cceeEEEEecCC
Q psy17682 394 PDPQRGIGMMP------KRGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 394 ~~~i~~~~~sp------~~~~l~~~--~~~~~~~~~~~~ 424 (490)
...|.+++|++ ++.+++++ ++.+++|++...
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 57899999986 67788877 458899998654
No 55
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2e-35 Score=302.17 Aligned_cols=369 Identities=11% Similarity=0.121 Sum_probs=265.4
Q ss_pred eeeeccCCC---CCcEEecccccce-eeeEEecc--CCCceEEeeeCCCeEEEEeCCCC--------CCCCC----CCcc
Q psy17682 25 LTYFSPRTL---TEPVVDLLYHQRR-VGLVLWHP--TAQNVLLTAGKEAEPILISLKDG--------YIPPS----EKSK 86 (490)
Q Consensus 25 ~~~~~~~~~---~~~~~~l~gH~~~-V~~v~~~p--~~~~~l~s~~~D~~v~iWd~~~~--------~~~~~----~~~~ 86 (490)
+..|+..+. ..+...+.+|.+. |++++|+| ++ .+|++|+.||+|++||+.++ ..... ....
T Consensus 41 v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred EEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccE
Confidence 556666532 1688899999999 99999999 88 89999999999999999643 11000 0000
Q ss_pred ccceeccccceeecccCC------------C-----CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCC
Q psy17682 87 SALKVTKRSNVLDKVGGK------------G-----GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAP 149 (490)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~ 149 (490)
..+.+......+...... + ...+...+.+++|+|+.. ..+++++.++.+++|+..
T Consensus 120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~~~d~~v~vwd~~---- 191 (615)
T 1pgu_A 120 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP----MRSMTVGDDGSVVFYQGP---- 191 (615)
T ss_dssp EEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSS----CEEEEEETTTEEEEEETT----
T ss_pred EEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCC----cEEEEEeCCCcEEEEeCC----
Confidence 011111111111100000 0 012334678899998851 257778999999999975
Q ss_pred CcccCCCCcceeecccC---CeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee
Q psy17682 150 NTGRINADHALVGGHKG---PVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP 225 (490)
Q Consensus 150 ~~~~~~~~~~~~~~h~~---~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 225 (490)
.+ .....+.+|.+ .|.+++|+|+ + .+|++++.||.|++||+.+++.+..+..+ ...|...|.+++|+
T Consensus 192 -~~---~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~~v~~~~~~- 262 (615)
T 1pgu_A 192 -PF---KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDD---QEPVQGGIFALSWL- 262 (615)
T ss_dssp -TB---EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBT---TBCCCSCEEEEEES-
T ss_pred -Cc---ceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEeccc---ccccCCceEEEEEc-
Confidence 22 24556788999 9999999999 6 89999999999999999988776654110 01599999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEecC----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC
Q psy17682 226 TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH----PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG 301 (490)
Q Consensus 226 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 301 (490)
++. +|++++.|+.|++||+++++.+..+..+ ...+.++.|. +++++++++.||.|++||+++++.+..+..|..
T Consensus 263 ~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 340 (615)
T 1pgu_A 263 DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNK 340 (615)
T ss_dssp SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSS
T ss_pred CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCC
Confidence 774 9999999999999999999999988866 3678888886 889999999999999999998877777765544
Q ss_pred CceeEEEEeCC---------------------------------CcEEEEEeCCCceeEEEEecCC--------------
Q psy17682 302 SKATRAIYLKS---------------------------------GLIFTTGFSKMSERQYSLRAPD-------------- 334 (490)
Q Consensus 302 ~~~~~~~~s~~---------------------------------~~~l~~~~~~~~~~~i~iwd~~-------------- 334 (490)
. +.+++| |+ +..+++++ .++.+++||+.
T Consensus 341 ~-v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~---~d~~i~~~~~~~~~~~~~~~~~~~s 415 (615)
T 1pgu_A 341 G-ITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS---WDDTLKVNGITKHEFGSQPKVASAN 415 (615)
T ss_dssp C-EEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEE---TTTEEEETTEEEEECSSCEEEEEEC
T ss_pred C-EEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEe---CCCCEEEEEcccCcccCCceEEEEc
Confidence 3 444443 32 44444444 34455555443
Q ss_pred ------------------------------------------------------------CCCCCeEEEeccCCCceeee
Q psy17682 335 ------------------------------------------------------------HLDEPIVMVELDTSNGVMFP 354 (490)
Q Consensus 335 ------------------------------------------------------------~~~~~~~~~~~~~~~~i~~~ 354 (490)
...... .....|...|.++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~ 494 (615)
T 1pgu_A 416 NDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYI 494 (615)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEE
T ss_pred CCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEE
Confidence 211000 1122456679999
Q ss_pred eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEee----------CceeEEeec--ceeEEEE
Q psy17682 355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMP----------KRGCDVNSC--EIGRFFR 420 (490)
Q Consensus 355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp----------~~~~l~~~~--~~~~~~~ 420 (490)
+|+|++++| ++|+.||.|++||+.+++. +..+. +...|++++|+| ++.++++++ +.+++|+
T Consensus 495 ~~s~~g~~l-~~~~~dg~i~iw~~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 495 SISPSETYI-AAGDVMGKILLYDLQSREV----KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp EECTTSSEE-EEEETTSCEEEEETTTTEE----EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred EECCCCCEE-EEcCCCCeEEEeeCCCCcc----eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 999999998 7899999999999998863 22222 567899999999 999988884 5889999
Q ss_pred ecCC
Q psy17682 421 LNNS 424 (490)
Q Consensus 421 ~~~~ 424 (490)
+.++
T Consensus 570 ~~~~ 573 (615)
T 1pgu_A 570 VKRP 573 (615)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 9886
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-35 Score=313.97 Aligned_cols=339 Identities=13% Similarity=0.091 Sum_probs=268.2
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.....+.+|.+.|++++|+|++ .+|++|+.||.|+|||+.++.. ...+.. +...+.
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~------------------~~~~~~-----~~~~v~ 59 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVE------------------VRSIQV-----TETPVR 59 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE------------------EEEEEC-----CSSCEE
T ss_pred ccceeeecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCce------------------EEEEec-----CCCcEE
Confidence 3567789999999999999999 8999999999999999987541 111111 233688
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
+++|+|+. ..+++++.+|.|.+|++. . ......+.+|.+.|.+++|+|++ .+|++++.||.|++||
T Consensus 60 ~~~~s~~~-----~~l~~~~~dg~i~vw~~~-----~---~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 60 AGKFIARK-----NWIIVGSDDFRIRVFNYN-----T---GEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEGGG-----TEEEEEETTSEEEEEETT-----T---CCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEE
T ss_pred EEEEeCCC-----CEEEEEeCCCeEEEEECC-----C---CcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEE
Confidence 99999985 357778889999999985 2 23456778999999999999998 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC-CcEEEEEEcC--CC
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP-DIVYSASWNW--DG 270 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~ 270 (490)
+.++... ...+.+|...|.+++|+| ++ ..+++++.||.|++||+.+++....+..+. ..+.+++|+| ++
T Consensus 126 ~~~~~~~------~~~~~~~~~~v~~~~~~p~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 126 WENNWAL------EQTFEGHEHFVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp GGGTSEE------EEEEECCSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred CCCCceE------EEEEcCCCCcEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 9766321 223556999999999999 66 599999999999999999888777776554 8899999999 99
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG 350 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~ 350 (490)
++|++++.||.|++||+++++.+..+..|... +.+++|+|++.++++++ .++.|++||+.+...... ...+...
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~dg~v~vwd~~~~~~~~~--~~~~~~~ 272 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSN-VSFAVFHPTLPIIISGS---EDGTLKIWNSSTYKVEKT--LNVGLER 272 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSEEEEEE---TTSCEEEEETTTCSEEEE--ECCSSSS
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcEEEE--eecCCCc
Confidence 99999999999999999999999988888775 99999999999999998 689999999987653222 2245578
Q ss_pred eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE------ee---------------------------------e-
Q psy17682 351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY------IN---------------------------------T- 390 (490)
Q Consensus 351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~------~~---------------------------------~- 390 (490)
+.+++|+|+++.++++.+.++.+.+|++....+.... +. .
T Consensus 273 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (814)
T 3mkq_A 273 SWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKEL 352 (814)
T ss_dssp EEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEE
T ss_pred EEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecC
Confidence 9999999999854234445777889987654322111 00 0
Q ss_pred eeCCCceeeEEEeeCceeEEee-cceeEEEEecCC
Q psy17682 391 FQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNS 424 (490)
Q Consensus 391 ~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~ 424 (490)
..+...+.+++|+|+|.+++++ ++.+.+|++...
T Consensus 353 ~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~ 387 (814)
T 3mkq_A 353 GSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAW 387 (814)
T ss_dssp CCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTT
T ss_pred CCCccCCceeEECCCCCEEEEecCCEEEEEECccc
Confidence 0122357899999999887765 557788886543
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-35 Score=283.02 Aligned_cols=246 Identities=15% Similarity=0.244 Sum_probs=204.0
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.|.+.|.+++|+|++ .+|++|+.||.|++||+.+++.+.. +.+|...|.+++|+ + +++++++.||.|++
T Consensus 132 ~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-------~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i 200 (401)
T 4aez_A 132 DESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKLRT-------MAGHQARVGCLSWN--R-HVLSSGSRSGAIHH 200 (401)
T ss_dssp CTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEE-------ECCCSSCEEEEEEE--T-TEEEEEETTSEEEE
T ss_pred CCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEEEE-------ecCCCCceEEEEEC--C-CEEEEEcCCCCEEE
Confidence 378899999999988 8999999999999999998876554 44699999999995 3 48999999999999
Q ss_pred EECC-CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEe
Q psy17682 243 WNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGF 320 (490)
Q Consensus 243 wd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~ 320 (490)
||++ .+..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..|... +.+++|+|++. ++++++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA-VKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC-CCEEEECTTSTTEEEEEC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce-EEEEEECCCCCCEEEEec
Confidence 9998 56678888899999999999999999999999999999999999998888877765 99999999764 555543
Q ss_pred CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682 321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG 399 (490)
Q Consensus 321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 399 (490)
. ..++.|++||+.++.. .....+...+.+++|+|++++++++ |+.||.|++||+.+++. ........+...|.+
T Consensus 280 g-s~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 280 G-TMDKQIHFWNAATGAR---VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-TKQVDIPAHDTRVLY 354 (401)
T ss_dssp C-TTTCEEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-EEEEEEECCSSCCCE
T ss_pred C-CCCCEEEEEECCCCCE---EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-eeEEEecCCCCCEEE
Confidence 1 1489999999998653 3334566789999999999999544 55899999999998752 222222345678999
Q ss_pred EEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 400 IGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 400 ~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
++|+|++.+++++ ++.+++|++.+++
T Consensus 355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 355 SALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999988877 4588999998876
No 58
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-35 Score=280.70 Aligned_cols=265 Identities=16% Similarity=0.199 Sum_probs=220.0
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+ ......+..|...|.+++|+|++ .+|++|+.|+.+++|++.......
T Consensus 88 v~vWd~~~-~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~----------------------- 142 (354)
T 2pbi_B 88 VIVWDSFT-TNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNEN----------------------- 142 (354)
T ss_dssp EEEEETTT-CCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCC-----------------------
T ss_pred EEEEECCC-CCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEecccccc-----------------------
Confidence 34455432 34456678899999999999999 899999999999999986532100
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG 184 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~ 184 (490)
.......+.+|.+.|.+++|+|++ ..|+++
T Consensus 143 -------------------------------------------------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~ 172 (354)
T 2pbi_B 143 -------------------------------------------------MAAKKKSVAMHTNYLSACSFTNSD-MQILTA 172 (354)
T ss_dssp -------------------------------------------------SGGGCEEEEECSSCEEEEEECSSS-SEEEEE
T ss_pred -------------------------------------------------ccccceeeeccCCcEEEEEEeCCC-CEEEEE
Confidence 000122456899999999999988 899999
Q ss_pred eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS 263 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~ 263 (490)
+.|++|++||+++++.+.. +.+|...|.+++|+|+. .++|++|+.||.|++||+++++++..+..|...|.+
T Consensus 173 s~D~~v~lwd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 173 SGDGTCALWDVESGQLLQS-------FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp ETTSEEEEEETTTCCEEEE-------EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred eCCCcEEEEeCCCCeEEEE-------EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 9999999999998876554 55699999999998852 259999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682 264 ASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342 (490)
Q Consensus 264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~ 342 (490)
++|+|++++|++++.|++|++||+++++.+..+..+. ...+.+++|+|+|.+|++|+ .|+.|++||+.++... .
T Consensus 246 v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~---~d~~i~vwd~~~~~~~--~ 320 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY---NDYTINVWDVLKGSRV--S 320 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCSEE--E
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE---CCCcEEEEECCCCceE--E
Confidence 9999999999999999999999999987776665332 12478999999999999998 6899999999876532 2
Q ss_pred EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682 343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE 377 (490)
Q Consensus 343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd 377 (490)
....|...|.+++|+|+|++| ++|+.|+.|++|+
T Consensus 321 ~l~~h~~~v~~l~~spdg~~l-~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 ILFGHENRVSTLRVSPDGTAF-CSGSWDHTLRVWA 354 (354)
T ss_dssp EECCCSSCEEEEEECTTSSCE-EEEETTSEEEEEC
T ss_pred EEECCCCcEEEEEECCCCCEE-EEEcCCCCEEecC
Confidence 234677889999999999998 8999999999996
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.2e-35 Score=298.61 Aligned_cols=339 Identities=12% Similarity=0.117 Sum_probs=252.0
Q ss_pred CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682 33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST 112 (490)
Q Consensus 33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (490)
...+...+.+|...|++++|+|+++.+|++++.|+.|++||+.++.. ...+... ......
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~------------------~~~~~~~--~~~~~~ 208 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF------------------SASDRTH--HKQGSF 208 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE------------------EEEECSS--SCTTCC
T ss_pred CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce------------------eeeeccc--CCCCce
Confidence 44677889999999999999999966899999999999999876441 1111110 001125
Q ss_pred CCeeEeccc-cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-e---cccCCeeEEEECCCCCCEEEEEeCC
Q psy17682 113 ANEITISED-YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-G---GHKGPVLDIAWSPHDDNVIASGSED 187 (490)
Q Consensus 113 v~~~~~s~~-~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~---~h~~~V~~~~~~p~~~~~l~s~~~d 187 (490)
+.+++|+|+ . ..+++++.+|.+++|++. .+ +....+ . +|...|.+++|+ ++ .+|++++.|
T Consensus 209 v~~~~~~~~~~-----~~l~~~~~dg~i~vwd~~-----~~---~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d 273 (615)
T 1pgu_A 209 VRDVEFSPDSG-----EFVITVGSDRKISCFDGK-----SG---EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGAD 273 (615)
T ss_dssp EEEEEECSTTC-----CEEEEEETTCCEEEEETT-----TC---CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETT
T ss_pred EEEEEECCCCC-----CEEEEEeCCCeEEEEECC-----CC---CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCC
Confidence 889999998 5 367778899999999985 22 234455 5 899999999999 77 899999999
Q ss_pred CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN 267 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 267 (490)
+.|++||+++++....+..+. ..+...+.++.|. ++ .++++++.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 274 ~~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~- 347 (615)
T 1pgu_A 274 ATIRVWDVTTSKCVQKWTLDK---QQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV- 347 (615)
T ss_dssp SEEEEEETTTTEEEEEEECCT---TCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-
T ss_pred CcEEEEECCCCcEEEEEcCCC---CcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-
Confidence 999999999887665543210 1134678888886 55 48999999999999999988888887776666665555
Q ss_pred CC---------------------------------CCEEEEEeCCCe---------------------------------
Q psy17682 268 WD---------------------------------GSKLLTTCKDKK--------------------------------- 281 (490)
Q Consensus 268 ~~---------------------------------~~~l~~~~~dg~--------------------------------- 281 (490)
|+ +..|++++.|+.
T Consensus 348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 427 (615)
T 1pgu_A 348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 427 (615)
T ss_dssp TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence 33 444444444444
Q ss_pred -----------------------------------------EEEEeCCCCcee-eeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 282 -----------------------------------------MRIINPRTGAIE-EEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 282 -----------------------------------------i~iwd~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
|++||+.+++.. ..+..|.. .+.+++|+|++++|+++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 428 DLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA-KPSYISISPSETYIAAG 506 (615)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS-CEEEEEECTTSSEEEEE
T ss_pred ceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccC-ceEEEEECCCCCEEEEc
Confidence 444444433322 33334555 49999999999999999
Q ss_pred eCCCceeEEEEecCCCCCCCeEEEec-c-CCCceeeeeecC----------CCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMVEL-D-TSNGVMFPLYDP----------DTNLVYLCGKGDSVIRYFEITAEPPFVHY 387 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~-~~~~i~~~~~s~----------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~ 387 (490)
+ .++.|++||+.+.+. .... . |...|.+++|+| ++++| ++++.||.|++||+.++......
T Consensus 507 ~---~dg~i~iw~~~~~~~---~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 507 D---VMGKILLYDLQSREV---KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV-ATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp E---TTSCEEEEETTTTEE---EECCSCCCSSCEEEEEECCCC------CCSCCEE-EEEETTSCEEEEESSCTTCCEEE
T ss_pred C---CCCeEEEeeCCCCcc---eeEeecCCCCceeEEEEcCccccccccccCCCEE-EEEcCCCcEEEEECCCCceechh
Confidence 8 689999999987653 2222 3 778899999999 99998 78999999999999987433333
Q ss_pred eeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682 388 INTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNN 423 (490)
Q Consensus 388 ~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~ 423 (490)
+. .+...|++++|+|++. ++++ ++.+++|++..
T Consensus 580 ~~--~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 580 LN--AHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TT--SSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred hh--cCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 32 3567899999999999 7776 45789999864
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.6e-37 Score=286.01 Aligned_cols=254 Identities=16% Similarity=0.201 Sum_probs=201.3
Q ss_pred EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682 38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT 117 (490)
Q Consensus 38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 117 (490)
..+.+|.+.|++++|+|++ .+|+||+.|++|+|||+.++..
T Consensus 7 ~~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~-------------------------------------- 47 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQ-------------------------------------- 47 (316)
T ss_dssp -------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEE--------------------------------------
T ss_pred eecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCc--------------------------------------
Confidence 4578999999999999999 8999999999999999875320
Q ss_pred eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEECC
Q psy17682 118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIP 196 (490)
Q Consensus 118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~ 196 (490)
.....+.+|.+.|.+++|+|. .+++|++|+.|++|++||++
T Consensus 48 --------------------------------------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 48 --------------------------------------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp --------------------------------------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred --------------------------------------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 001245689999999999863 23899999999999999998
Q ss_pred CCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCee---EEEEecCCCcEEEEEEcCC--
Q psy17682 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEI---MIQIECHPDIVYSASWNWD-- 269 (490)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~-- 269 (490)
+++.. ....+.+|...|.+++|+|+ + .+|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 90 ~~~~~-----~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 90 NGTWE-----KSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp SSCCC-----EEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred CCcce-----EEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 76432 12235679999999999998 5 4899999999999999987632 3345578899999999997
Q ss_pred ---------------CCEEEEEeCCCeEEEEeCCCC---ceeeeeeecCCCceeEEEEeCCC----cEEEEEeCCCceeE
Q psy17682 270 ---------------GSKLLTTCKDKKMRIINPRTG---AIEEEAVCHEGSKATRAIYLKSG----LIFTTGFSKMSERQ 327 (490)
Q Consensus 270 ---------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~s~~~----~~l~~~~~~~~~~~ 327 (490)
+++|++++.|++|++||++.. ++...+.+|... +.+++|+|++ .+|++++ .|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~-V~~v~~sp~~~~~~~~las~s---~D~~ 239 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS---QDGR 239 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC-EEEEECCCCSSCSCCEEEEEE---TTCE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc-eEEEEecCCCCCCCceEEEEc---CCCe
Confidence 478999999999999999765 356667788775 9999999986 7899998 7999
Q ss_pred EEEecCCCCCC----CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 328 YSLRAPDHLDE----PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 328 i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
|++|++..... ...+ ..+...|.+++|+|++++| ++++.|+.|++|+....
T Consensus 240 v~iw~~~~~~~~~~~~~~~--~~~~~~v~~v~~sp~g~~l-as~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLL--HKFNDVVWHVSWSITANIL-AVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEEECSSTTCCCCBCCEE--EECSSCEEEEEECTTTCCE-EEEESSSCEEEEEECTT
T ss_pred EEEEEccCccccchhhhhh--hcCCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEECCC
Confidence 99999876321 1122 2456789999999999998 78999999999998743
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-35 Score=284.45 Aligned_cols=294 Identities=14% Similarity=0.158 Sum_probs=234.3
Q ss_pred cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
+..|.+.|++++|+|++ .+|++|+.|+.|++||+.++..
T Consensus 4 ~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~---------------------------------------- 42 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW---------------------------------------- 42 (372)
T ss_dssp EESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE----------------------------------------
T ss_pred ecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcE----------------------------------------
Confidence 45599999999999999 8999999999999999876320
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
.....+.+|...|.+++|+|++ .+|++++.||.|++||+.+++
T Consensus 43 ------------------------------------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 43 ------------------------------------VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp ------------------------------------EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTE
T ss_pred ------------------------------------EeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCe
Confidence 0112456899999999999988 899999999999999997775
Q ss_pred cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee---EEEE-ecCCCcEEEEEEcCCCCEEEE
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI---MIQI-ECHPDIVYSASWNWDGSKLLT 275 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~ 275 (490)
..... .+..|...|.+++|+|++. +|++++.|+.|++||++.++. ...+ ..|...|.+++|+|++++|++
T Consensus 86 ~~~~~-----~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 86 WKPTL-----VILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEEEE-----ECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred eeeeE-----EeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 43222 2455889999999999985 999999999999999988763 3333 468899999999999999999
Q ss_pred EeCCCeEEEEeCC------------------CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682 276 TCKDKKMRIINPR------------------TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD 337 (490)
Q Consensus 276 ~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~ 337 (490)
++.||.|++||++ .++.+..+..|... +.+++|+|++.+|++++ .++.|++||+++.+
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-VHGVCFSANGSRVAWVS---HDSTVCLADADKKM 235 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSSSSEEEEEE---TTTEEEEEEGGGTT
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe-EEEEEECCCCCEEEEEe---CCCEEEEEECCCCc
Confidence 9999999999954 56777777777765 99999999999999998 68999999999766
Q ss_pred CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC--CCC-e---------------------------eEE
Q psy17682 338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA--EPP-F---------------------------VHY 387 (490)
Q Consensus 338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~--~~~-~---------------------------~~~ 387 (490)
....+ ..+...+.+++|+|+++++ ++| .|+.|++|++.+ ++- + ...
T Consensus 236 ~~~~~--~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
T 1k8k_C 236 AVATL--ASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS 311 (372)
T ss_dssp EEEEE--ECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred eeEEE--ccCCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccc
Confidence 43332 2456689999999999887 666 899999999988 310 0 000
Q ss_pred -------eee-eeCCCceeeEEEe-eCc---eeEEee--cceeEEEEecCCC
Q psy17682 388 -------INT-FQTPDPQRGIGMM-PKR---GCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 388 -------~~~-~~~~~~i~~~~~s-p~~---~~l~~~--~~~~~~~~~~~~~ 425 (490)
... ..|..+|++++|+ ++| .+++++ ++.+++|++.+.+
T Consensus 312 ~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 312 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 111 1456789999977 555 777777 4588999987643
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=289.62 Aligned_cols=305 Identities=12% Similarity=0.162 Sum_probs=223.0
Q ss_pred ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682 41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE 120 (490)
Q Consensus 41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 120 (490)
..|.+.|++++|+|++ .+|++|+.||.|+|||+.++.....
T Consensus 25 ~~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~-------------------------------------- 65 (447)
T 3dw8_B 25 VAEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQS-------------------------------------- 65 (447)
T ss_dssp CCGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----C--------------------------------------
T ss_pred ccccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCc--------------------------------------
Confidence 4578999999999999 8999999999999999987541100
Q ss_pred ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeeccc------------CCeeEEEECCCCC-CEEEEEeCC
Q psy17682 121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHK------------GPVLDIAWSPHDD-NVIASGSED 187 (490)
Q Consensus 121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~~~~~p~~~-~~l~s~~~d 187 (490)
...+. ......+.+|. +.|.+++|+|++. .+|++++.|
T Consensus 66 -------------~~~~~----------------~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 66 -------------HSRGE----------------YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp -------------CCCCC----------------EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred -------------ccccc----------------eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 00000 00122345666 8899999999864 589999999
Q ss_pred CcEEEEECCCCCcccc-------------------ccc-------------ceee-ecccccCEEEEEEeeCCCCEEEEE
Q psy17682 188 CVVKVWQIPDGGISRT-------------------LTE-------------PVVD-LLYHQRRVGLVLWHPTAQNVLLTA 234 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~-------------------~~~-------------~~~~-~~~~~~~v~~~~~~p~~~~~l~s~ 234 (490)
++|++||+.+++.... +.. +... ..+|...|.+++|+|++. +|++|
T Consensus 117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 195 (447)
T 3dw8_B 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA 195 (447)
T ss_dssp SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE
T ss_pred CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe
Confidence 9999999876432100 000 0111 357999999999999985 88888
Q ss_pred eCCCcEEEEECCC-CeeEEE-------EecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCce----eeeeeecCC
Q psy17682 235 GSDNNVAIWNVGT-GEIMIQ-------IECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAI----EEEAVCHEG 301 (490)
Q Consensus 235 ~~dg~v~iwd~~~-~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~ 301 (490)
.|+.|++||+++ ++.+.. +.+|...|.+++|+|++ ++|++++.||.|++||+++++. ...+..|..
T Consensus 196 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 274 (447)
T 3dw8_B 196 -DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPED 274 (447)
T ss_dssp -CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC--
T ss_pred -CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCC
Confidence 799999999984 444442 45799999999999998 9999999999999999999886 677777664
Q ss_pred -----------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCC----------C---ceeeeee
Q psy17682 302 -----------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTS----------N---GVMFPLY 356 (490)
Q Consensus 302 -----------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~----------~---~i~~~~~ 356 (490)
..+.+++|+|+|++|++++ . +.|++||++. ......+...... . .+..++|
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 275 PSNRSFFSEIISSISDVKFSHSGRYMMTRD---Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp ---CCHHHHHTTCEEEEEECTTSSEEEEEE---S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred ccccccccccCceEEEEEECCCCCEEEEee---C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 1599999999999999997 4 9999999987 4433333321100 0 1334899
Q ss_pred cCCCCeEEEEecCCCeEEEEEecCCCCeeEEe-----------------------------eeeeCCCceeeEEEeeCce
Q psy17682 357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI-----------------------------NTFQTPDPQRGIGMMPKRG 407 (490)
Q Consensus 357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~i~~~~~sp~~~ 407 (490)
+|++++| ++|+.||.|++||+.+++.+.-.. ........|..++|+|++.
T Consensus 351 s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 429 (447)
T 3dw8_B 351 NGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN 429 (447)
T ss_dssp CTTSSEE-EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS
T ss_pred CCCCCEE-EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCC
Confidence 9999998 899999999999999886321000 0112235688999999999
Q ss_pred eEEeecc-eeEEEE
Q psy17682 408 CDVNSCE-IGRFFR 420 (490)
Q Consensus 408 ~l~~~~~-~~~~~~ 420 (490)
++++++. .+.+|.
T Consensus 430 ~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 430 IIAVATTNNLYIFQ 443 (447)
T ss_dssp EEEEECSSCEEEEE
T ss_pred EEEEEecceeeeec
Confidence 9887754 445554
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-34 Score=268.10 Aligned_cols=254 Identities=17% Similarity=0.164 Sum_probs=203.6
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCC
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSD 237 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d 237 (490)
++.+|.+.|.+++|+|+| ++|++|+.|++|+|||+..... .....+.+|...|.+++|+|. + .+|++|+.|
T Consensus 4 ~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-----~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D 76 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 76 (297)
T ss_dssp ECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-----CCCEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred eccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-----EEEEEEccccCCeEEEEecCCCcC-CEEEEEcCC
Confidence 567999999999999998 8999999999999999875321 123346789999999999864 5 599999999
Q ss_pred CcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeC
Q psy17682 238 NNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLK 311 (490)
Q Consensus 238 g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~ 311 (490)
++|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|++||++++.. ...+.+|... +.+++|+|
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~-v~~~~~~p 155 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWAP 155 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC-EEEEEECC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc-cceEeecC
Confidence 999999998774 56677889999999999997 88999999999999999987642 3455677765 99999999
Q ss_pred C-------------CcEEEEEeCCCceeEEEEecCCCCCCCeE--EEeccCCCceeeeeecCCC---CeEEEEecCCCeE
Q psy17682 312 S-------------GLIFTTGFSKMSERQYSLRAPDHLDEPIV--MVELDTSNGVMFPLYDPDT---NLVYLCGKGDSVI 373 (490)
Q Consensus 312 ~-------------~~~l~~~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~~---~~l~~~g~~dg~i 373 (490)
+ +++|++|+ .|+.|++||+++...... .....|...|.+++|+|++ ++| ++++.|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs---~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l-as~s~D~~v 231 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM-ASVSQDRTC 231 (297)
T ss_dssp CC------------CCEEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEETTSCE
T ss_pred CcccccccCCCCCCcceEEEEc---CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEE-EEEECCCcE
Confidence 7 56899998 789999999987553221 1223577889999999996 555 899999999
Q ss_pred EEEEecCCCCe--eEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 374 RYFEITAEPPF--VHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 374 ~iwd~~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
++||+...... ...+....+...|.+++|+|++.+++++ ++.+++|+....+
T Consensus 232 ~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred EEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 99999875321 1222212345789999999999998877 4578999987443
No 64
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.1e-36 Score=334.07 Aligned_cols=359 Identities=20% Similarity=0.224 Sum_probs=277.4
Q ss_pred eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceecc--ccc-------
Q psy17682 26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTK--RSN------- 96 (490)
Q Consensus 26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~--~~~------- 96 (490)
..|+..+ ......+.+|.+.|++++|+|++ ..|++++.||+|++|++................... ...
T Consensus 865 ~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1249)
T 3sfz_A 865 ELWNIDS-RLKVADCRGHLSWVHGVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDN 942 (1249)
T ss_dssp EEEETTT-TEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEES
T ss_pred EEEEcCC-CceeeecCCCccceEEEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecC
Confidence 3444432 45667789999999999999999 899999999999999976432111111110000000 000
Q ss_pred ---eeecccCCC--CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEE
Q psy17682 97 ---VLDKVGGKG--GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDI 171 (490)
Q Consensus 97 ---~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~ 171 (490)
........+ .......+.+++++|+. ..++++..+|.+.+|++. . ......+.+|.+.|.++
T Consensus 943 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-----~~l~~g~~~g~i~i~d~~-----~---~~~~~~~~~h~~~v~~l 1009 (1249)
T 3sfz_A 943 IRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL-----EYVAFGDEDGAIKIIELP-----N---NRVFSSGVGHKKAVRHI 1009 (1249)
T ss_dssp SSSEEEEEESSCCEEEECCSCEEEEEECTTS-----SEEEEEETTSCCEEEETT-----T---TSCEEECCCCSSCCCCE
T ss_pred CcceEEEecCcceEEEcccCcEEEEEEcCCC-----CEEEEEcCCCCEEEEEcC-----C---CceeeecccCCCceEEE
Confidence 000000000 01113357889999985 367788999999999985 2 22455677999999999
Q ss_pred EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE
Q psy17682 172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM 251 (490)
Q Consensus 172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 251 (490)
+|+|++ .++++++.||.|++||+.+++... ...|...|.++.|+|++ .+++++.|+.|++||+.+++.+
T Consensus 1010 ~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~~--------~~~~~~~v~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1010 QFTADG-KTLISSSEDSVIQVWNWQTGDYVF--------LQAHQETVKDFRLLQDS--RLLSWSFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp EECSSS-SCEEEECSSSBEEEEETTTTEEEC--------CBCCSSCEEEEEECSSS--EEEEEESSSEEEEEETTTTCCC
T ss_pred EECCCC-CEEEEEcCCCEEEEEECCCCceEE--------EecCCCcEEEEEEcCCC--cEEEEECCCcEEEEECCCCcee
Confidence 999998 899999999999999998876543 33589999999999976 6889999999999999999999
Q ss_pred EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682 252 IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331 (490)
Q Consensus 252 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw 331 (490)
..+.+|...|.+++|+|+++++++++.|++|++||+.+++++..+.+|.+. +.+++|+|+|++|++|+ .|+.|++|
T Consensus 1079 ~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~-v~~~~~s~dg~~lat~~---~dg~i~vw 1154 (1249)
T 3sfz_A 1079 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGC-VRCSAFSLDGILLATGD---DNGEIRIW 1154 (1249)
T ss_dssp EEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSC-EEEEEECSSSSEEEEEE---TTSCCCEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCc-EEEEEECCCCCEEEEEe---CCCEEEEE
Confidence 999999999999999999999999999999999999999999888888875 99999999999999998 68899999
Q ss_pred cCCCCCCCeEE-------EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEEe
Q psy17682 332 APDHLDEPIVM-------VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGMM 403 (490)
Q Consensus 332 d~~~~~~~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~s 403 (490)
|+.+++..... ....|...|.+++|+|+|++| ++++ |.|++||+.+++.. ..+ .+...|.+++|+
T Consensus 1155 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l-~s~~--g~v~vwd~~~g~~~----~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A 1155 NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTL-VSAG--GYLKWWNVATGDSS----QTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCE-EEES--SSEEEBCSSSCBCC----CCCCCSSCCCCCCEEC
T ss_pred ECCCCceEEEeccccccccccccCceEEEEEECCCCCEE-EECC--CeEEEEECCCCcee----eeeeccCCcccEEEEC
Confidence 99987643322 112466779999999999999 5663 89999999998732 223 355689999999
Q ss_pred eCceeEEeecc--eeEEEEe
Q psy17682 404 PKRGCDVNSCE--IGRFFRL 421 (490)
Q Consensus 404 p~~~~l~~~~~--~~~~~~~ 421 (490)
|++.++++++. .+.+|++
T Consensus 1228 ~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1228 PDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp SSSCCEEEECTTCCEEEECC
T ss_pred CCCCEEEEecCCcEEEEEee
Confidence 99998888754 6667765
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-36 Score=288.50 Aligned_cols=296 Identities=10% Similarity=0.061 Sum_probs=220.3
Q ss_pred ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI 118 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (490)
.+..|.+.|++++|+|++ .+|++|+.|+.|++||+.++... ....+. .+...+.+++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~----------------~~~~~~-----~h~~~v~~~~~ 63 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWK----------------HARTFS-----DHDKIVTCVDW 63 (377)
T ss_dssp EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEE----------------ECCCBC-----CCSSCEEEEEE
T ss_pred eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceE----------------EEEEEe-----cCCceEEEEEE
Confidence 345577899999999999 89999999999999999875200 000111 13346889999
Q ss_pred ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
+|+. ..+++++.++.+++|++. .++.......+.+|...|.+++|+|++ .+|++|+.|+.|++||++++
T Consensus 64 s~~~-----~~l~s~s~d~~v~vwd~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 64 APKS-----NRIVTCSQDRNAYVYEKR-----PDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp CTTT-----CCEEEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC---
T ss_pred eCCC-----CEEEEEeCCCeEEEEEcC-----CCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCc
Confidence 9985 357788899999999985 222223455677899999999999988 89999999999999999877
Q ss_pred Ccccccccceeeecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC------------------CCeeEEEEecCCC
Q psy17682 199 GISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG------------------TGEIMIQIECHPD 259 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~------------------~~~~~~~~~~~~~ 259 (490)
+.... ...+.+ |...|.+++|+|++. +|++++.|+.|++||++ .++.+..+ .|..
T Consensus 133 ~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 206 (377)
T 3dwl_C 133 NDWWV----SKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG 206 (377)
T ss_dssp --CCC----CEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS
T ss_pred cccee----eeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc
Confidence 63111 122445 899999999999985 99999999999999985 34566666 7999
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH 335 (490)
Q Consensus 260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~ 335 (490)
.|.+++|+|++++|++++.||.|++||+++++. +..+..|... +.+++|+|++++|++|+ .++.+ +|+...
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~---~~~~~-~~~~~~ 281 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP-LRSLLWANESAIVAAGY---NYSPI-LLQGNE 281 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC-EEEEEEEETTEEEEEES---SSSEE-EECCCC
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc-eEEEEEcCCCCEEEEEc---CCcEE-EEEeCC
Confidence 999999999999999999999999999999987 7778788775 99999999999999997 34555 666542
Q ss_pred CCC---------------------------C---------eEEE--------------eccCCCceeeeeecCCCCe---
Q psy17682 336 LDE---------------------------P---------IVMV--------------ELDTSNGVMFPLYDPDTNL--- 362 (490)
Q Consensus 336 ~~~---------------------------~---------~~~~--------------~~~~~~~i~~~~~s~~~~~--- 362 (490)
... . ..+. ...|...|.++.+.+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~ 361 (377)
T 3dwl_C 282 SGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNIT 361 (377)
T ss_dssp ---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEE
T ss_pred CceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceE
Confidence 110 0 0000 0126677999987654433
Q ss_pred EEEEecCCCeEEEEEe
Q psy17682 363 VYLCGKGDSVIRYFEI 378 (490)
Q Consensus 363 l~~~g~~dg~i~iwd~ 378 (490)
.+++|+.||.|++||+
T Consensus 362 ~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 362 AFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEETTSEEEEECC
T ss_pred EEEeecCCCcEEEecC
Confidence 3489999999999985
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-34 Score=268.09 Aligned_cols=254 Identities=17% Similarity=0.306 Sum_probs=211.2
Q ss_pred cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
...+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.+++.... +.+|...|.+++|+|++. +|++++.|
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~~~d 86 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSN-LLVSASDD 86 (312)
T ss_dssp EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcccchh-------hccCCCceEEEEEcCCCC-EEEEECCC
Confidence 44678999999999999988 8999999999999999988876544 456999999999999985 99999999
Q ss_pred CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682 238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 317 (490)
+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... +.++.|+|++.+|+
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGSLIV 165 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEE
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999888888765 99999999999999
Q ss_pred EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682 318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ 397 (490)
Q Consensus 318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 397 (490)
+++ .++.|++||+++.+..... ...+...+..++|+|++++| ++++.|+.|++||+.+++.. ..+.........
T Consensus 166 ~~~---~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~ 239 (312)
T 4ery_A 166 SSS---YDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSKGKCL-KTYTGHKNEKYC 239 (312)
T ss_dssp EEE---TTSCEEEEETTTCCEEEEE-CCSSCCCEEEEEECTTSSEE-EEEETTTEEEEEETTTTEEE-EEECSSCCSSSC
T ss_pred EEe---CCCcEEEEECCCCceeeEE-eccCCCceEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEE-EEEEecCCceEE
Confidence 998 6899999999976533222 22445678999999999998 78899999999999988632 222222221222
Q ss_pred eeEEEe-eCceeEEeec--ceeEEEEecCCCce
Q psy17682 398 RGIGMM-PKRGCDVNSC--EIGRFFRLNNSGLC 427 (490)
Q Consensus 398 ~~~~~s-p~~~~l~~~~--~~~~~~~~~~~~~~ 427 (490)
....++ +++.++++++ +.+++|++.++..+
T Consensus 240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp CCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 333444 6677888774 47899999888733
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=275.83 Aligned_cols=310 Identities=14% Similarity=0.139 Sum_probs=233.9
Q ss_pred CCcEEecccccceeeeEEecc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST 112 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (490)
......+.+|.+.|++++|+| ++ .+|++|+.||.|++||+.++..... .
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~--------------~--------------- 82 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSY--------------Y--------------- 82 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSC--------------E---------------
T ss_pred CcceeeeeccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccce--------------E---------------
Confidence 456778899999999999999 77 8999999999999999987652110 0
Q ss_pred CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682 113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV 192 (490)
Q Consensus 113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i 192 (490)
... . . ... ......+|...|.+++|+|++..+|++++.||.|++
T Consensus 83 ----~~~--------~-~---------~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 126 (408)
T 4a11_B 83 ----TCK--------A-V---------CSI--------------GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKV 126 (408)
T ss_dssp ----EEC--------E-E---------EEE--------------CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEE
T ss_pred ----ecc--------c-c---------ccc--------------cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEE
Confidence 000 0 0 000 001124799999999999955589999999999999
Q ss_pred EECCCCCcccccccceeeecccccCEEEEEEeeCCC--CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ--NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG 270 (490)
Q Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (490)
||+.+++....+. +...+.++.|+|.+. .++++++.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus 127 wd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 127 WDTNTLQTADVFN--------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp EETTTTEEEEEEE--------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred eeCCCCccceecc--------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 9999877655432 778899999998642 389999999999999999999999999999999999999999
Q ss_pred C-EEEEEeCCCeEEEEeCCCCc-eeeee---------------eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682 271 S-KLLTTCKDKKMRIINPRTGA-IEEEA---------------VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP 333 (490)
Q Consensus 271 ~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~ 333 (490)
+ +|++++.||.|++||++++. ....+ ..|.. .+.+++|+|++.+|++++ .++.|++||+
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~---~dg~i~vwd~ 274 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG-KVNGLCFTSDGLHLLTVG---TDNRMRLWNS 274 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS-CEEEEEECTTSSEEEEEE---TTSCEEEEET
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC-ceeEEEEcCCCCEEEEec---CCCeEEEEEC
Confidence 8 58999999999999998765 33333 34444 499999999999999998 6889999999
Q ss_pred CCCCCCeEEEecc---CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEE
Q psy17682 334 DHLDEPIVMVELD---TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDV 410 (490)
Q Consensus 334 ~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~ 410 (490)
.+........... ....+........+..+ ++++.|+.|++||+.+++++ ..+. .+...|++++|+|++.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~d~~~~~~~-~~~~--~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF-VFVPYGSTIAVYTVYSGEQI-TMLK--GHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE-EEEEETTEEEEEETTTCCEE-EEEC--CCSSCEEEEEEETTTTEEE
T ss_pred CCCccceeccccccccccccceeEEecCCCceE-EEEecCCEEEEEECcCCcce-eeec--cCCCeEEEEEEcCCCCEEE
Confidence 9876433222111 11112222222333444 45677999999999998732 2222 3557899999999999888
Q ss_pred ee--cceeEEEEecCCC
Q psy17682 411 NS--CEIGRFFRLNNSG 425 (490)
Q Consensus 411 ~~--~~~~~~~~~~~~~ 425 (490)
++ ++.+++|++...+
T Consensus 351 s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 351 SGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEETTSCEEEEEECC--
T ss_pred EECCCCeEEEEeCCCCC
Confidence 87 4588999999876
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-34 Score=299.11 Aligned_cols=254 Identities=18% Similarity=0.170 Sum_probs=209.6
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.....+.+|...|++++|+|++ .+|+||+.|++|+|||+.++.
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~------------------------------------ 463 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV------------------------------------ 463 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE------------------------------------
T ss_pred cccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc------------------------------------
Confidence 3456799999999999999999 899999999999999997643
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
....+.+|.+.|.+++|+|++ .+|++|+.|++|++||
T Consensus 464 ------------------------------------------~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 464 ------------------------------------------STRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWN 500 (694)
T ss_dssp ------------------------------------------EEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEEC
T ss_pred ------------------------------------------ceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEE
Confidence 011346899999999999988 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
+....... +. ....+|...|.+++|+|++. ..+++++.|+.|++||+++++....+.+|...|++++|+|++++|
T Consensus 501 ~~~~~~~~-~~---~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l 576 (694)
T 3dm0_A 501 TLGECKYT-IS---EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 576 (694)
T ss_dssp TTSCEEEE-EC---SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCCccee-ec---cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence 75432211 11 11246889999999999862 489999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--------
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-------- 345 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-------- 345 (490)
++++.||+|++||+++++.+..+..+. .+.+++|+|++.+++++. ++.|++||+++......+...
T Consensus 577 ~sg~~Dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~----~~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 650 (694)
T 3dm0_A 577 ASGGKDGVVLLWDLAEGKKLYSLEANS--VIHALCFSPNRYWLCAAT----EHGIKIWDLESKSIVEDLKVDLKAEAEKA 650 (694)
T ss_dssp EEEETTSBCEEEETTTTEEEECCBCSS--CEEEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEECCCCC------
T ss_pred EEEeCCCeEEEEECCCCceEEEecCCC--cEEEEEEcCCCcEEEEEc----CCCEEEEECCCCCChhhhccccccccccc
Confidence 999999999999999999887776443 499999999999999886 567999999876432221100
Q ss_pred ---------cCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682 346 ---------DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 346 ---------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
.+...+.+++|+|+|++| ++|+.||.|++|++.
T Consensus 651 ~~~~~~~~~~~~~~~~~l~~spdg~~l-~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 651 DNSGPAATKRKVIYCTSLNWSADGSTL-FSGYTDGVIRVWGIG 692 (694)
T ss_dssp ----------CCCCEEEEEECTTSSEE-EEEETTSEEEEEEC-
T ss_pred cccccccCCceeEEeeeEEEcCCCCEE-EEEcCCCeEEEEecc
Confidence 011136789999999999 799999999999985
No 69
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=276.47 Aligned_cols=258 Identities=21% Similarity=0.253 Sum_probs=212.6
Q ss_pred cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682 36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE 115 (490)
Q Consensus 36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 115 (490)
++..+.+|.+.|++++|+|++ .+|++|+.||.|++||+..+..
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~------------------------------------ 45 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH------------------------------------ 45 (379)
T ss_dssp --CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE------------------------------------
T ss_pred ccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc------------------------------------
Confidence 456789999999999999999 8999999999999999864210
Q ss_pred eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEE
Q psy17682 116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVW 193 (490)
Q Consensus 116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iw 193 (490)
.....+.+|.+.|.+++|+|+ + .+|++|+.||.|++|
T Consensus 46 ----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 46 ----------------------------------------KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIW 84 (379)
T ss_dssp ----------------------------------------EEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEE
T ss_pred ----------------------------------------eeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEE
Confidence 011245689999999999986 6 899999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcC-
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNW- 268 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~- 268 (490)
|+.+++.. ....+..|...|.+++|+|+ + .+|++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 85 d~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 85 KEENGRWS-----QIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEETTEEE-----EEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EcCCCcee-----EeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 99877521 22235569999999999999 7 499999999999999998873 4455678999999999999
Q ss_pred ------------CCCEEEEEeCCCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEE
Q psy17682 269 ------------DGSKLLTTCKDKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYS 329 (490)
Q Consensus 269 ------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~ 329 (490)
++.+|++++.||.|++||++++. ....+..|... +.+++|+|+ +.+|++++ .|+.|+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~~~~l~s~~---~dg~i~ 234 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYLASVS---QDRTCI 234 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---TTSCEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc-EeEEEECCCCCCCCeEEEEe---CCCEEE
Confidence 69999999999999999998765 33455567665 999999999 89999998 689999
Q ss_pred EecCCCCCCCeEEEec---cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 330 LRAPDHLDEPIVMVEL---DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 330 iwd~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+||++....+...... .+...+.+++|+|++++| ++++.||.|++|++..+.
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCE-EEEESSSSEEEEEEEETT
T ss_pred EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEE-EEecCCCcEEEEeCCCCC
Confidence 9999986544333322 366779999999999998 678889999999999754
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=280.64 Aligned_cols=283 Identities=15% Similarity=0.210 Sum_probs=230.7
Q ss_pred ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682 43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY 122 (490)
Q Consensus 43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 122 (490)
|.+.|++++|+|++ .+|++|+.||.|++||.. +. ....+.. +...+.+++|+|+.
T Consensus 107 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~~-~~------------------~~~~~~~-----~~~~v~~~~~~~~~ 161 (425)
T 1r5m_A 107 TTNQVTCLAWSHDG-NSIVTGVENGELRLWNKT-GA------------------LLNVLNF-----HRAPIVSVKWNKDG 161 (425)
T ss_dssp -CBCEEEEEECTTS-SEEEEEETTSCEEEEETT-SC------------------EEEEECC-----CCSCEEEEEECTTS
T ss_pred CCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCC-CC------------------eeeeccC-----CCccEEEEEECCCC
Confidence 78899999999998 899999999999999933 22 1111111 23468899999985
Q ss_pred ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCC---------------eeEEEECCCCCCEEEEEeCC
Q psy17682 123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGP---------------VLDIAWSPHDDNVIASGSED 187 (490)
Q Consensus 123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~---------------V~~~~~~p~~~~~l~s~~~d 187 (490)
..+++++.++.+.+|++. .+ .....+..|... +.+++|+|++ .+++++.|
T Consensus 162 -----~~l~~~~~d~~i~iwd~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 226 (425)
T 1r5m_A 162 -----THIISMDVENVTILWNVI-----SG---TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPK 226 (425)
T ss_dssp -----SEEEEEETTCCEEEEETT-----TT---EEEEEECCC---------------CCCBSCCEEEETT--EEEEECGG
T ss_pred -----CEEEEEecCCeEEEEECC-----CC---cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCC
Confidence 356678899999999985 22 233445556655 9999999864 68999999
Q ss_pred CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN 267 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 267 (490)
|.|++||+.+++.... +..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus 227 g~i~~~d~~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 298 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGK-------LIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV 298 (425)
T ss_dssp GCEEEEETTCSSCSEE-------ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE
T ss_pred CeEEEEEcCCCceeee-------eccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC
Confidence 9999999988766544 445999999999999985 99999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC--------
Q psy17682 268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP-------- 339 (490)
Q Consensus 268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~-------- 339 (490)
|++ .+++++.|+.|++||+++++.+..+..|... +.+++|+|++.+|++++ .++.|++||+.+...+
T Consensus 299 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~---~dg~i~i~~~~~~~~~~~~~~~~~ 373 (425)
T 1r5m_A 299 GDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGRISQDGQKYAVAF---MDGQVNVYDLKKLNSKSRSLYGNR 373 (425)
T ss_dssp TTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEEECTTSSEEEEEE---TTSCEEEEECHHHHC---------
T ss_pred CCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEEEcCCCCEEEEEE---CCCeEEEEECCCCccceeeeeccc
Confidence 999 9999999999999999999999888877765 99999999999999998 6889999999865410
Q ss_pred ----------eEEEeccCCC--ceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682 340 ----------IVMVELDTSN--GVMFPLYDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 340 ----------~~~~~~~~~~--~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
.......+.. .|.+++|+|++++| ++++.||.|++|++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 374 DGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI-SVAYSLQEGSVVAIP 424 (425)
T ss_dssp -----CEECCEEEEECCTTCCCCEEEEEECTTSSEE-EEEESSSCCEEEECC
T ss_pred ccccCcccchhhhhhcCcccCCceEEEEccCCCceE-EEEecCceEEEEeec
Confidence 1112223433 89999999999998 788999999999985
No 71
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-34 Score=276.05 Aligned_cols=306 Identities=10% Similarity=0.058 Sum_probs=213.1
Q ss_pred ceeeeEEeccCCCceEEeeeCCC-------eEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEA-------EPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT 117 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~-------~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 117 (490)
-+|.+++|+|++ .+|++||.|. .|++|++..+..... ........ ..+. .....+.+++
T Consensus 15 ~PV~sv~fs~dg-~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~------~~~~~~~~--~~l~-----~~~~~v~s~~ 80 (365)
T 4h5i_A 15 YPAYGAKFLNND-TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEK------EQFHILSE--FALE-----DNDDSPTAID 80 (365)
T ss_dssp SCEEEEEEEETT-EEEEEEECCSSSSSCCEEEEEEEECTTSSSHH------HHEEEEEE--EECC-----TTSCCCCEEE
T ss_pred CCEEEEEEeCCC-cEEEEECCCccccCCCCEEEEEEEcCCCccee------eeeeeeeE--EEcc-----CCCCceEEEE
Confidence 379999999999 8999987643 599999876542110 00000000 0011 1122456666
Q ss_pred eccccc----cceEEEEEeeCCCceEEEECCCCCCCCcccC-CCCcceeecccCCeeEEEECCCCCCEEEE--EeCCCcE
Q psy17682 118 ISEDYV----KEFKEEIRKLKSQQALSILPPPSTAPNTGRI-NADHALVGGHKGPVLDIAWSPHDDNVIAS--GSEDCVV 190 (490)
Q Consensus 118 ~s~~~~----~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s--~~~dg~i 190 (490)
++++.. ......++.+..++.+++|++.......... .........+...+.+++|+||| +++++ ++.|++|
T Consensus 81 ~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i 159 (365)
T 4h5i_A 81 ASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIM 159 (365)
T ss_dssp EETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEE
T ss_pred eCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEE
Confidence 655420 0000113345667889999875221110000 00111223456679999999999 66654 4578999
Q ss_pred EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE--EecCCCcEEEEEEcC
Q psy17682 191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ--IECHPDIVYSASWNW 268 (490)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~ 268 (490)
+|||+++++.+..+. |...|.+++|+|++. ++++++. +.+++|+..+++.+.. ...|...|.+++|+|
T Consensus 160 ~iwd~~~~~~~~~~~--------~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 160 RIIDPSDLTEKFEIE--------TRGEVKDLHFSTDGK-VVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EEEETTTTEEEEEEE--------CSSCCCEEEECTTSS-EEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred EEeECCCCcEEEEeC--------CCCceEEEEEccCCc-eEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence 999999887655432 778899999999995 8888875 5577777777765543 346888899999999
Q ss_pred CCCEEEEEeCCC----eEEEEeCCCCce----eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682 269 DGSKLLTTCKDK----KMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340 (490)
Q Consensus 269 ~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~ 340 (490)
+++.+++++.|+ .+++||+..... ...+..|... +++++|+|+|++|++|+ .|+.|+|||+++++...
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-V~~~~~Spdg~~lasgs---~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG-ITSMDVDMKGELAVLAS---NDNSIALVKLKDLSMSK 305 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC-EEEEEECTTSCEEEEEE---TTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC-eEeEEECCCCCceEEEc---CCCEEEEEECCCCcEEE
Confidence 999999999887 688999887653 2344466654 99999999999999999 68999999999865322
Q ss_pred EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
. ....|...|++++|+|||++| ++|+.|++|+|||+...
T Consensus 306 ~-~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 306 I-FKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPLN 344 (365)
T ss_dssp E-ETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCTT
T ss_pred E-ecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCCC
Confidence 2 223578889999999999999 89999999999999754
No 72
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-33 Score=267.26 Aligned_cols=292 Identities=14% Similarity=0.227 Sum_probs=232.8
Q ss_pred ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC 188 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg 188 (490)
+...|++++|+|+.. ..+++++.|+.|++|++....... ......+.+|.+.|.+++|+|++ .+|++|+.|+
T Consensus 37 H~~~V~~v~~sp~~~----~~l~S~s~D~~i~vWd~~~~~~~~---~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~ 108 (340)
T 4aow_A 37 HNGWVTQIATTPQFP----DMILSASRDKTIIMWKLTRDETNY---GIPQRALRGHSHFVSDVVISSDG-QFALSGSWDG 108 (340)
T ss_dssp CSSCEEEEEECTTCT----TEEEEEETTSCEEEEEECCSSSCS---EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ccCCEEEEEEeCCCC----CEEEEEcCCCeEEEEECCCCCccc---ceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccc
Confidence 445799999999741 367889999999999986322111 12456788999999999999998 8999999999
Q ss_pred cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE-EEEecCCCcEEEEEEc
Q psy17682 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM-IQIECHPDIVYSASWN 267 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~ 267 (490)
.|++|+......... ...+...+..+.+++++. +|++++.|+.+++||+...... ....+|...+..++|+
T Consensus 109 ~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 180 (340)
T 4aow_A 109 TLRLWDLTTGTTTRR-------FVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS 180 (340)
T ss_dssp EEEEEETTTTEEEEE-------EECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEEC
T ss_pred cceEEeecccceeee-------ecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEc
Confidence 999999877655433 334778889999999985 8999999999999999766543 3345789999999999
Q ss_pred CCC--CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682 268 WDG--SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL 345 (490)
Q Consensus 268 ~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~ 345 (490)
+++ .++++++.|+.|++||+++++....+.+|.+. +.+++|+|++++|++|+ .|+.|++||+++... ....
T Consensus 181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s---~Dg~i~iwd~~~~~~---~~~~ 253 (340)
T 4aow_A 181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDGSLCASGG---KDGQAMLWDLNEGKH---LYTL 253 (340)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTCEEEEEETTTTEE---EEEE
T ss_pred cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc-EEEEEECCCCCEEEEEe---CCCeEEEEEeccCce---eeee
Confidence 865 57889999999999999999999999888875 99999999999999998 789999999987653 3344
Q ss_pred cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe------eeeeCCCceeeEEEeeCceeEEee--cceeE
Q psy17682 346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI------NTFQTPDPQRGIGMMPKRGCDVNS--CEIGR 417 (490)
Q Consensus 346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~ 417 (490)
.+...+..+.|+|++.++ +++.|+.|++||++.+....... ....+...|++++|+|++.+++++ ++.++
T Consensus 254 ~~~~~v~~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 254 DGGDIINALCFSPNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp ECSSCEEEEEECSSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCCceEEeeecCCCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 556789999999988665 45679999999998765221111 112345689999999999998887 45889
Q ss_pred EEEecCCC
Q psy17682 418 FFRLNNSG 425 (490)
Q Consensus 418 ~~~~~~~~ 425 (490)
+|++.+++
T Consensus 332 iW~~~tGt 339 (340)
T 4aow_A 332 VWQVTIGT 339 (340)
T ss_dssp EEEEEC--
T ss_pred EEeCCCcC
Confidence 99999875
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-33 Score=297.82 Aligned_cols=304 Identities=16% Similarity=0.168 Sum_probs=242.4
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+ ...+..+.+|...|++++|+|++ .+|++|+.||.|++||+.++.. ......
T Consensus 37 v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~------------------~~~~~~- 95 (814)
T 3mkq_A 37 VEIWNYET-QVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEK------------------VVDFEA- 95 (814)
T ss_dssp EEEEETTT-TEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCE------------------EEEEEC-
T ss_pred EEEEECCC-CceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE------------------EEEEec-
Confidence 45566543 45677888999999999999999 8999999999999999987651 111111
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIAS 183 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s 183 (490)
+...+.+++|+|+. ..+++++.+|.+.+|++. . + ......+.+|...|.+++|+| ++ ..+++
T Consensus 96 ----~~~~v~~~~~s~~~-----~~l~~~~~dg~i~vw~~~----~-~--~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~ 158 (814)
T 3mkq_A 96 ----HPDYIRSIAVHPTK-----PYVLSGSDDLTVKLWNWE----N-N--WALEQTFEGHEHFVMCVAFNPKDP-STFAS 158 (814)
T ss_dssp ----CSSCEEEEEECSSS-----SEEEEEETTSEEEEEEGG----G-T--SEEEEEEECCSSCEEEEEEETTEE-EEEEE
T ss_pred ----CCCCEEEEEEeCCC-----CEEEEEcCCCEEEEEECC----C-C--ceEEEEEcCCCCcEEEEEEEcCCC-CEEEE
Confidence 23468899999985 256788999999999985 1 1 124456789999999999999 55 89999
Q ss_pred EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE
Q psy17682 184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV 261 (490)
Q Consensus 184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v 261 (490)
++.||+|++||+.++.....+. ..+...+.+++|+| ++. ++++++.||.|++||+++++.+..+.+|...|
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v 231 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLT------TGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEE------CCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EeCCCeEEEEECCCCcceeEEe------cCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 9999999999998776544432 22448899999999 775 99999999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc--EEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL--IFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
.+++|+|++++|++++.||.|++||+.+++....+..+... +.+++|+|++. +++++. ++.+.+|++......
T Consensus 232 ~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 306 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-SWCIATHPTGRKNYIASGF----DNGFTVLSLGNDEPT 306 (814)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-EEEEEECTTCGGGEEEEEE----TTEEEEEECSCCSCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-EEEEEEccCCCceEEEEEe----CCCEEEEEcCCCCce
Confidence 99999999999999999999999999999999888877664 99999999987 577775 666788887653322
Q ss_pred eEEE-----------------------------------------eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682 340 IVMV-----------------------------------------ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI 378 (490)
Q Consensus 340 ~~~~-----------------------------------------~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~ 378 (490)
.... ...+...+..++|+|+|+++ ++++ |+.+.+|++
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-a~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 307 LSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV-TVVG-DGEYVIYTA 384 (814)
T ss_dssp EEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEE-EEEE-TTEEEEEET
T ss_pred eEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEE-EEec-CCEEEEEEC
Confidence 1110 01122347889999999998 5555 899999997
Q ss_pred cC
Q psy17682 379 TA 380 (490)
Q Consensus 379 ~~ 380 (490)
..
T Consensus 385 ~~ 386 (814)
T 3mkq_A 385 LA 386 (814)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.8e-34 Score=275.36 Aligned_cols=297 Identities=10% Similarity=0.061 Sum_probs=231.5
Q ss_pred ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC---CC---CEEE
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH---DD---NVIA 182 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~---~~---~~l~ 182 (490)
+...|.+++|+|. .+++++.+|.|++|++..... .........+.+|...|.+++|+|+ ++ .+|+
T Consensus 15 h~~~i~~~~~~~~-------~l~s~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 15 HDADIFSVSACNS-------FTVSCSGDGYLKVWDNKLLDN--ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp SSSCEEEEEECSS-------EEEEEETTSEEEEEESBCCTT--CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhcCeEEEEecCC-------eEEEEcCCCEEEEEECCCccc--ccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3457899999984 688899999999999862211 0111245677899999999999996 24 5899
Q ss_pred EEeCCCcEEEEECCCCCcccccccceeeeccc-----ccCEEEEEEe----eCCCCE-EEEEeCCCcEEEEECCC-----
Q psy17682 183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYH-----QRRVGLVLWH----PTAQNV-LLTAGSDNNVAIWNVGT----- 247 (490)
Q Consensus 183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----p~~~~~-l~s~~~dg~v~iwd~~~----- 247 (490)
+++.||.|++|++.+++.... .....+..| ...|.+++|+ |++. + |++++.||.|++||+++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKK--VIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCC--EEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEcCCCCEEEEEccCCccccc--ccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCcccccc
Confidence 999999999999988765110 112234457 5899999999 9986 7 99999999999999988
Q ss_pred -CeeEE-----EEe-------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee---c---CCCceeEEE
Q psy17682 248 -GEIMI-----QIE-------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC---H---EGSKATRAI 308 (490)
Q Consensus 248 -~~~~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~~~~~~~ 308 (490)
++.+. .+. .|...|.+++|+|++ +|++++.||.|++||+++++.+..+.. | ... +.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~-i~~i~ 240 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVK 240 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc-cceEE
Confidence 66555 663 488899999999999 999999999999999999999988887 6 554 99999
Q ss_pred EeCCCcEEEEEeCCCce---eEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682 309 YLKSGLIFTTGFSKMSE---RQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGKGDSVIR 374 (490)
Q Consensus 309 ~s~~~~~l~~~~~~~~~---~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~ 374 (490)
|+|++.+|++++ .+ +.|++||+++.+....+... .|...|.+++|+|++++| ++++.||.|+
T Consensus 241 ~~~~~~~l~~~~---~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~ 316 (397)
T 1sq9_A 241 FSPQGSLLAIAH---DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLR 316 (397)
T ss_dssp ECSSTTEEEEEE---EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEE
T ss_pred ECCCCCEEEEEe---cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE-EEEeCCCeEE
Confidence 999999999998 67 99999999976533322210 067789999999999998 7889999999
Q ss_pred EEEecCCCCeeEEeee----eeC---------------CCceeeEEEeeCc----------eeEEee--cceeEEEEecC
Q psy17682 375 YFEITAEPPFVHYINT----FQT---------------PDPQRGIGMMPKR----------GCDVNS--CEIGRFFRLNN 423 (490)
Q Consensus 375 iwd~~~~~~~~~~~~~----~~~---------------~~~i~~~~~sp~~----------~~l~~~--~~~~~~~~~~~ 423 (490)
+||+.+++... .+.. ..+ ..+|++++|+|++ .+++++ ++.+++|++.+
T Consensus 317 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 317 FWDVKTKERIT-TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEETTTTEEEE-EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEcCCCceeE-EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 99999886332 2220 023 6789999999998 577766 55889999987
Q ss_pred C
Q psy17682 424 S 424 (490)
Q Consensus 424 ~ 424 (490)
+
T Consensus 396 g 396 (397)
T 1sq9_A 396 G 396 (397)
T ss_dssp -
T ss_pred C
Confidence 5
No 75
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1e-33 Score=276.55 Aligned_cols=273 Identities=14% Similarity=0.243 Sum_probs=220.9
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
...+.+|.+.|++++|+|++..+|++++.||.|++|++....... .
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~--------------------~-------------- 166 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP--------------------E-------------- 166 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC--------------------C--------------
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc--------------------C--------------
Confidence 456789999999999999855899999999999999997632100 0
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 196 (490)
..+ .......+.+|...|.+++|+|++..+|++|+.||.|++|++.
T Consensus 167 ---------------------------------~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 212 (430)
T 2xyi_A 167 ---------------------------------PSG-ECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDIN 212 (430)
T ss_dssp ---------------------------------TTC-CCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETT
T ss_pred ---------------------------------ccc-cCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCC
Confidence 000 0123446679999999999999985599999999999999998
Q ss_pred CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC---eeEEEEecCCCcEEEEEEcCCCC-E
Q psy17682 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG---EIMIQIECHPDIVYSASWNWDGS-K 272 (490)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~ 272 (490)
.+........+...+.+|...|.+++|+|++.++|++++.|+.|++||++++ +.+..+..|...|++++|+|+++ +
T Consensus 213 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 292 (430)
T 2xyi_A 213 ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 292 (430)
T ss_dssp SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCE
Confidence 7654333223344566799999999999966679999999999999999987 57778888999999999999887 6
Q ss_pred EEEEeCCCeEEEEeCCC-CceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCC------------
Q psy17682 273 LLTTCKDKKMRIINPRT-GAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDE------------ 338 (490)
Q Consensus 273 l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~------------ 338 (490)
|++|+.||.|++||+++ ..++..+..|... +.++.|+|++. +|++++ .++.|++||+.....
T Consensus 293 l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-v~~i~~sp~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~ 368 (430)
T 2xyi_A 293 LATGSADKTVALWDLRNLKLKLHSFESHKDE-IFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDAEDGPP 368 (430)
T ss_dssp EEEEETTSEEEEEETTCTTSCSEEEECCSSC-EEEEEECSSCTTEEEEEE---TTSCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred EEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-EEEEEECCCCCCEEEEEe---CCCcEEEEeCCCCccccCccccccCCc
Confidence 88999999999999998 5667788878775 99999999985 688887 689999999987332
Q ss_pred CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
........|...|..++|+|++++++++++.||.|++|++...
T Consensus 369 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 369 ELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 2233333566779999999999965689999999999999753
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.8e-34 Score=268.06 Aligned_cols=265 Identities=14% Similarity=0.138 Sum_probs=213.1
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
...+.||.+.|++++|+|++ .+|++|+.||.|++||+.++...
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~------------------------------------ 46 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN------------------------------------ 46 (351)
T ss_dssp CCEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC------------------------------------
T ss_pred cccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc------------------------------------
Confidence 34578999999999999998 89999999999999999864310
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEEE
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd 194 (490)
......+.+|...|.+++|+|. + .+|++|+.||.|++||
T Consensus 47 --------------------------------------~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 47 --------------------------------------WELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWE 87 (351)
T ss_dssp --------------------------------------EEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEE
T ss_pred --------------------------------------ceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEe
Confidence 0012245689999999999994 6 8999999999999999
Q ss_pred CCCCCcccccc--cceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCeeEEEEe-------------cC
Q psy17682 195 IPDGGISRTLT--EPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEIMIQIE-------------CH 257 (490)
Q Consensus 195 ~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~ 257 (490)
+.+++...... .+...+..|...|.+++|+|+ +. +|++++.||.|++||+++++.+..+. .|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 98775322111 224456679999999999999 74 99999999999999998876443322 57
Q ss_pred CCcEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeCCC----cEEEEEeCCCceeEE
Q psy17682 258 PDIVYSASWNWD---GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLKSG----LIFTTGFSKMSERQY 328 (490)
Q Consensus 258 ~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~~~----~~l~~~~~~~~~~~i 328 (490)
...+.+++|+|+ +..+++++.++.+.+|+...++. ...+.+|... +.+++|+|++ .+|++|+ .|+.|
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~~p~~~~~~~~l~s~~---~dg~i 242 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL-IRSISWAPSIGRWYQLIATGC---KDGRI 242 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC-EEEEEECCCSSCSSEEEEEEE---TTSCE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc-eeEEEECCCCCCcceEEEEEc---CCCeE
Confidence 788999999997 89999999999999888887765 5556677665 9999999998 8999998 68999
Q ss_pred EEecCCCCCCC--------------------------------------------eEEEeccCCCceeeeeecCCCCeEE
Q psy17682 329 SLRAPDHLDEP--------------------------------------------IVMVELDTSNGVMFPLYDPDTNLVY 364 (490)
Q Consensus 329 ~iwd~~~~~~~--------------------------------------------~~~~~~~~~~~i~~~~~s~~~~~l~ 364 (490)
++||++..... .......|...|.+++|+|++++|
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l- 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL- 321 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE-
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE-
Confidence 99999864211 111122466789999999999998
Q ss_pred EEecCCCeEEEEEecCCCC
Q psy17682 365 LCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 365 ~~g~~dg~i~iwd~~~~~~ 383 (490)
++|+.||.|++|++.+++.
T Consensus 322 ~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEETTSCEEEEEECTTSC
T ss_pred EEecCCCcEEEEecCcCcc
Confidence 7899999999999998863
No 77
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=275.41 Aligned_cols=300 Identities=11% Similarity=0.054 Sum_probs=222.7
Q ss_pred cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
-+.-...|.+++|+|+| .++||+|.|++|+ |.+.+. .+ .++...+..++|+
T Consensus 11 ~~~~~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~-----------------~l---------~gh~~~v~~V~Fs 61 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDG-TLYLTTFPDISIG--QPKYAK-----------------DI---------NCNSKNLFHVKEF 61 (588)
T ss_dssp SCCCSSSSCCEEECTTS-CEEEECSSSEEEE--EECCCS-----------------CC---------SSBGGGTEEEEEE
T ss_pred HhHhhccEEEEEECCCC-CEEEEEcCCceee--cccccc-----------------ee---------cCCCccEEEEEEC
Confidence 34456889999999999 9999999999999 644332 00 1245578999999
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
|++ .++.+.+|... .. ....+ +|...|.+++|+|+| .+||+++.||.|++||.+.
T Consensus 62 Pdg------------~~~~~~~~~~~--------~~-~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~-- 116 (588)
T 2j04_A 62 PLE------------FENKLDFELAQ--------QN-GLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK-- 116 (588)
T ss_dssp CCC------------CCCTTTTSCCC--------SS-CSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--
T ss_pred CCC------------CcceEEEEeCC--------Cc-eEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--
Confidence 984 23333333221 11 11111 568899999999998 8999999999999999533
Q ss_pred cccccccceeeeccccc-----CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-------eEEEE----ecCCCcEEE
Q psy17682 200 ISRTLTEPVVDLLYHQR-----RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-------IMIQI----ECHPDIVYS 263 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~----~~~~~~v~~ 263 (490)
++. .+. |.. .|.+++|+|+|+ +|++|+.||+|++||+.+++ .+.++ .+|...|.+
T Consensus 117 ~l~-------~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 117 MLT-------NLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp EEE-------ECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred eee-------ecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 222 233 444 599999999996 99999999999999999875 35666 567789999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 264 ASWNWDGSKLLTTCKDKKMRIINPRTGAI---EEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
++|+|+| +++++.|++|++||+.+++. ..++. +|.. .+.+++|+ |..+++++ ++.|++||+.+...
T Consensus 188 VawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~-~V~svaFs--g~~LASa~----~~tIkLWd~~~~~~- 257 (588)
T 2j04_A 188 IVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR-KITDLKIV--DYKVVLTC----PGYVHKIDLKNYSI- 257 (588)
T ss_dssp EEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS-CCCCEEEE--TTEEEEEC----SSEEEEEETTTTEE-
T ss_pred EEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC-cEEEEEEE--CCEEEEEe----CCeEEEEECCCCeE-
Confidence 9999999 88899999999999988774 24554 5554 49999999 68888886 68999999987542
Q ss_pred eEEEeccCCCceeeeee--cCCCCeEEEEecCCCeEEEEEecC-----CCCee--------------EEeeeeeCCCcee
Q psy17682 340 IVMVELDTSNGVMFPLY--DPDTNLVYLCGKGDSVIRYFEITA-----EPPFV--------------HYINTFQTPDPQR 398 (490)
Q Consensus 340 ~~~~~~~~~~~i~~~~~--s~~~~~l~~~g~~dg~i~iwd~~~-----~~~~~--------------~~~~~~~~~~~i~ 398 (490)
.....+|...+..++| +|++..+ ++++.||+ ++|.... ...+. ..+..+.+...|.
T Consensus 258 -~~~~~gh~~~V~~va~~~s~d~~~L-a~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~ 334 (588)
T 2j04_A 258 -SSLKTGSLENFHIIPLNHEKESTIL-LMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIH 334 (588)
T ss_dssp -EEEECSCCSCCCEEEETTCSSCEEE-EECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEE
T ss_pred -EEEEcCCCceEEEEEeeeCCCCCEE-EEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEE
Confidence 1333378888999999 9999888 78889999 9998631 11000 0111222233589
Q ss_pred eEEEeeCceeEEeecce
Q psy17682 399 GIGMMPKRGCDVNSCEI 415 (490)
Q Consensus 399 ~~~~sp~~~~l~~~~~~ 415 (490)
+++|||||.++|++.+.
T Consensus 335 ~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 335 GISLSPDGYSIAIVYDM 351 (588)
T ss_dssp EEEECTTSSEEEEEEEE
T ss_pred EEEECCCCCEEEEEEec
Confidence 99999999998887654
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=267.48 Aligned_cols=293 Identities=10% Similarity=0.084 Sum_probs=226.6
Q ss_pred ccccCCeeEeccccccceEEEEEeeCC---CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC--CCEEEE
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKS---QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD--DNVIAS 183 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~---~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s 183 (490)
+...|.+++|+|+. ..++++++. ++.+++|++. .++. ......+|...|.+++|+|++ +.+|++
T Consensus 17 h~~~v~~~~~~p~~----~~l~~~~s~~~~d~~v~iw~~~-----~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 17 FNYTVFDCKWVPCS----AKFVTMGNFARGTGVIQLYEIQ-----HGDL--KLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CSSCEEEEEECTTS----SEEEEEEC--CCCEEEEEEEEC-----SSSE--EEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred CCCceEEEEEcCCC----ceEEEecCccCCCcEEEEEeCC-----CCcc--cceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 34478999999985 234555655 9999999985 2221 112234899999999999983 389999
Q ss_pred EeCCCcEEEEECCCCC-cccccccceeeecccccCEEEEEE------eeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe
Q psy17682 184 GSEDCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLW------HPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE 255 (490)
Q Consensus 184 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~------~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~ 255 (490)
|+.||.|++||+.+++ ... .+.+|...|.++.| +|++. +|++++.|+.|++||+++++ .+..+.
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVY-------SVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp EETTSCEEEECTTSCSSCSE-------EECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred ecCCCeEEEEeCCCCCccEE-------EEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceecc
Confidence 9999999999998876 333 35569999999965 57774 99999999999999999887 777776
Q ss_pred cCCC----cEEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC---CCcEEEEEeCCCc
Q psy17682 256 CHPD----IVYSAS----WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK---SGLIFTTGFSKMS 324 (490)
Q Consensus 256 ~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~~~~~~~ 324 (490)
.|.+ .+.+++ |+|++++|++++.||.|++||+++++.... ..|.. .+.+++|+| ++.++++++ .
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~-~v~~~~~~~~~~~~~~l~~~~---~ 232 (357)
T 3i2n_A 158 PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKN-GVCSLEFDRKDISMNKLVATS---L 232 (357)
T ss_dssp CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSS-CEEEEEESCSSSSCCEEEEEE---S
T ss_pred ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCC-ceEEEEcCCCCCCCCEEEEEC---C
Confidence 5554 799998 788999999999999999999999887544 44555 499999999 899999998 6
Q ss_pred eeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee---------------E
Q psy17682 325 ERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV---------------H 386 (490)
Q Consensus 325 ~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---------------~ 386 (490)
++.|++||+++........ ...|...|.+++|+|+++.++++|+.||.|++||+..+.... .
T Consensus 233 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~ 312 (357)
T 3i2n_A 233 EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVS 312 (357)
T ss_dssp TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEE
T ss_pred CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccc
Confidence 8999999998765443332 125778899999999999555899999999999999764321 2
Q ss_pred Eeeee-eCCCceeeEEEeeCceeEE-ee--cceeEEEEecCCC
Q psy17682 387 YINTF-QTPDPQRGIGMMPKRGCDV-NS--CEIGRFFRLNNSG 425 (490)
Q Consensus 387 ~~~~~-~~~~~i~~~~~sp~~~~l~-~~--~~~~~~~~~~~~~ 425 (490)
.+..+ .+..+|++++|+|++.+++ ++ ++.+++|++.+..
T Consensus 313 ~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 313 LLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 23333 3557899999999998887 45 4588999998754
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-33 Score=271.70 Aligned_cols=268 Identities=16% Similarity=0.200 Sum_probs=216.2
Q ss_pred eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682 24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG 103 (490)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (490)
.+..|+..+.........+|...|++++|+|++ .+|++|+.||.|++||+.++.
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~------------------------- 167 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQT------------------------- 167 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------------------------
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCe-------------------------
Confidence 366677665554444445599999999999988 899999999999999987643
Q ss_pred CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682 104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS 183 (490)
Q Consensus 104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s 183 (490)
....+.+|...|.+++|+ + .++++
T Consensus 168 -----------------------------------------------------~~~~~~~~~~~v~~~~~~--~-~~l~~ 191 (401)
T 4aez_A 168 -----------------------------------------------------KLRTMAGHQARVGCLSWN--R-HVLSS 191 (401)
T ss_dssp -----------------------------------------------------EEEEECCCSSCEEEEEEE--T-TEEEE
T ss_pred -----------------------------------------------------EEEEecCCCCceEEEEEC--C-CEEEE
Confidence 011345789999999995 3 79999
Q ss_pred EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682 184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS 263 (490)
Q Consensus 184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~ 263 (490)
|+.||.|++||++.... ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++.+..+..|...|.+
T Consensus 192 ~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANH------QIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp EETTSEEEEEETTSSSC------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred EcCCCCEEEEecccCcc------eeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 99999999999984432 2233567999999999999985 9999999999999999999999999999999999
Q ss_pred EEEcCCCC-EEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682 264 ASWNWDGS-KLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340 (490)
Q Consensus 264 ~~~~~~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~ 340 (490)
++|+|++. ++++++ .|+.|++||+++++.+..+..+ . .+.+++|+|++.++++++.. .++.|++||+.+.....
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~~~g~-~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-S-QVTSLIWSPHSKEIMSTHGF-PDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-S-CEEEEEECSSSSEEEEEECT-TTCEEEEEEEETTEEEE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-C-cEEEEEECCCCCeEEEEeec-CCCcEEEEecCCcccee
Confidence 99999775 555554 6999999999999988888643 3 49999999999999884210 58999999998754433
Q ss_pred EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
......|...|.+++|+|++++| ++++.||.|++|++.+++..
T Consensus 342 ~~~~~~h~~~v~~~~~s~dg~~l-~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 342 QVDIPAHDTRVLYSALSPDGRIL-STAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEECCSSCCCEEEECTTSSEE-EEECTTSEEEEEECCC----
T ss_pred EEEecCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCccc
Confidence 33334677889999999999998 78999999999999998744
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-32 Score=267.96 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=199.7
Q ss_pred ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
.+|...|++|+|+|+| .+|++|+.||+|++||+++++.+.. +.+|...+.++.|+ + .+|++|+.|+.++
T Consensus 144 ~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~-------~~~h~~~v~~~s~~--~-~~l~sgs~d~~i~ 212 (420)
T 4gga_A 144 EQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRN-------MTSHSARVGSLSWN--S-YILSSGSRSGHIH 212 (420)
T ss_dssp CSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEEE--T-TEEEEEETTSEEE
T ss_pred cCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEE-------EeCCCCceEEEeeC--C-CEEEEEeCCCcee
Confidence 4788899999999998 8999999999999999998876554 45699999998886 3 4899999999999
Q ss_pred EEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eeeeeecCCCceeEEEEeCCC-cE
Q psy17682 242 IWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSG-LI 315 (490)
Q Consensus 242 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~-~~ 315 (490)
+||.... ..+..+.+|...+..+.|+|+++++++++.|+.+++||..+++. +.....|... +..++|+|.+ .+
T Consensus 213 ~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~-V~~~~~~p~~~~~ 291 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNV 291 (420)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC-EEEEEECTTCTTE
T ss_pred EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc-eeeeeeCCCcccE
Confidence 9998864 46677889999999999999999999999999999999987753 3445556654 9999999974 45
Q ss_pred EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682 316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTP 394 (490)
Q Consensus 316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~ 394 (490)
+++++. ..|+.|++||+.++.. .........+.++.|+|+++.++++ |+.|+.|+|||+.+++++ ..+. .|.
T Consensus 292 la~~~g-s~D~~I~iwd~~t~~~---~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v-~~l~--gH~ 364 (420)
T 4gga_A 292 LATGGG-TSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-AELK--GHT 364 (420)
T ss_dssp EEEEEC-TTTCEEEEEETTTTEE---EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-EEEC--CCS
T ss_pred EEEEee-cCCCEEEEEeCCcccc---ceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE-EEEc--CCC
Confidence 555432 1589999999998753 3334456789999999999998554 347999999999998733 2222 356
Q ss_pred CceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 395 DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 395 ~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
..|++++|+|+|.+++++ ++.+++|++....
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 789999999999999887 4589999987654
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.6e-34 Score=268.32 Aligned_cols=276 Identities=9% Similarity=0.030 Sum_probs=222.0
Q ss_pred ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI 118 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (490)
...+|.+.|++++|+|++ .+|++++.|+.|++|++..+... .
T Consensus 6 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~-----------------~-------------------- 47 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKN-----------------V-------------------- 47 (342)
T ss_dssp CSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTE-----------------E--------------------
T ss_pred cccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcc-----------------c--------------------
Confidence 456899999999999998 89999999999999998764300 0
Q ss_pred ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCC-EEEEEeCCCcEEEEEC-C
Q psy17682 119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDN-VIASGSEDCVVKVWQI-P 196 (490)
Q Consensus 119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~~~dg~i~iwd~-~ 196 (490)
....+.+|...|.+++|+|++ . +|++|+.||.|++||+ .
T Consensus 48 --------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 48 --------------------------------------DLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp --------------------------------------EEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSS
T ss_pred --------------------------------------cceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEecc
Confidence 011234789999999999987 8 9999999999999999 7
Q ss_pred CCCcccccccceeeecc--cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC---------CeeEEEEecCCCcEEEEE
Q psy17682 197 DGGISRTLTEPVVDLLY--HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT---------GEIMIQIECHPDIVYSAS 265 (490)
Q Consensus 197 ~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~---------~~~~~~~~~~~~~v~~~~ 265 (490)
+++. ..+.+ |...|.+++|+| + .+|++++.|+.|++||+++ ++++..+. |...|.+++
T Consensus 89 ~~~~--------~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 89 SPSF--------QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp SSSE--------EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred CCce--------EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 7643 23556 999999999999 6 4999999999999999987 76666666 889999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCC-Ccee-e-eeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCC-----
Q psy17682 266 WNWDGSKLLTTCKDKKMRIINPRT-GAIE-E-EAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHL----- 336 (490)
Q Consensus 266 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~-~-~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~----- 336 (490)
|+|++ +++++.|+.|++||+++ +... . ....+.. .+.+++|+| ++.++++++ .++.+++|+++..
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~l~~~~---~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY-QIRDVALLPKEQEGYACSS---IDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSS-CEEEEEECSGGGCEEEEEE---TTSEEEEEECCTTCCSTT
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCC-ceeEEEECCCCCCEEEEEe---cCCcEEEEEEcCCCcccc
Confidence 99887 99999999999999998 5432 2 2223444 499999999 999999998 6899999999876
Q ss_pred -CCCeEEEecc-------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-C-CCceeeEEEeeCc
Q psy17682 337 -DEPIVMVELD-------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-T-PDPQRGIGMMPKR 406 (490)
Q Consensus 337 -~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~-~~~i~~~~~sp~~ 406 (490)
.....+.... +...|.+++|+|++++| ++|+.||.|++||+.+++. +..+. + ..+|.+++ |++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~--~~~ 304 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKK----IKNFAKFNEDSVVKIA--CSD 304 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEE----EEECCCCSSSEEEEEE--ECS
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEE-EEecCCceEEEEcCccHhH----hhhhhcccCCCceEec--CCC
Confidence 3333332211 13389999999999998 7899999999999998863 22233 3 57899999 999
Q ss_pred eeEEeecce
Q psy17682 407 GCDVNSCEI 415 (490)
Q Consensus 407 ~~l~~~~~~ 415 (490)
.++++++.+
T Consensus 305 ~~l~s~s~D 313 (342)
T 1yfq_A 305 NILCLATSD 313 (342)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEecC
Confidence 998888654
No 82
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-32 Score=268.17 Aligned_cols=292 Identities=12% Similarity=0.115 Sum_probs=228.1
Q ss_pred cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
+.+| ..+....|+|++ .+|++|+.||.|++||+.++.. ..... .+...+.+++|+
T Consensus 94 ~~~~-~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~------------------~~~~~-----~h~~~v~~~~~~ 148 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQ------------------REIDQ-----AHVSEITKLKFF 148 (420)
T ss_dssp SCSC-CEEEEEEECSSS-CEEEEEETTSCEEEECTTSCEE------------------EEETT-----SSSSCEEEEEEC
T ss_pred EecC-CceEEEEEecCC-CEEEEEECCCCEEEEeCCCcce------------------eeecc-----cccCccEEEEEC
Confidence 4455 555666788888 8999999999999999886531 11111 133468999999
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
|+. ..+++++.++.+++|++. . ......+.+|.+.|.+++|+|++ .+|++++.||+|++||+++++
T Consensus 149 ~~~-----~~l~s~s~d~~i~iwd~~-----~---~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 149 PSG-----EALISSSQDMQLKIWSVK-----D---GSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTS-----SEEEEEETTSEEEEEETT-----T---CCCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE
T ss_pred CCC-----CEEEEEeCCCeEEEEeCC-----C---CcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCc
Confidence 985 367788999999999985 2 22456778999999999999988 899999999999999999887
Q ss_pred cccccccceeeecccccCEEE---------------------EEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cC
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGL---------------------VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CH 257 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~---------------------~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~ 257 (490)
....+.. ...|...+.+ ++|+|++. +|++|+.||.|++||+++++.+..+. .|
T Consensus 215 ~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 215 TIHTFNR----KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKF 289 (420)
T ss_dssp EEEEECB----TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred eeEEeec----CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEccccc
Confidence 7665542 1123444444 45567774 89999999999999999998777765 57
Q ss_pred CCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682 258 PDIVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH 335 (490)
Q Consensus 258 ~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~ 335 (490)
...|.+++|+|+++ +|++++.||.|++||+++++. +..+..|....+.++.+ +++.+|++++ .|+.|++|++..
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~---~d~~v~iw~~~~ 365 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG---FDTSIKLDIISD 365 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET---TTEEEEEEEECC
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec---CCccEEEEeccC
Confidence 88999999999998 999999999999999998754 77777766666777755 5788999988 799999999987
Q ss_pred CCCCeEE-------EeccCCCceeeeeecCCCC---eEEEEecCCCeEEEEEecC
Q psy17682 336 LDEPIVM-------VELDTSNGVMFPLYDPDTN---LVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 336 ~~~~~~~-------~~~~~~~~i~~~~~s~~~~---~l~~~g~~dg~i~iwd~~~ 380 (490)
...+... ....+...+..++|+|+++ .++++ +.+|.+.+|++.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~-g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 366 PESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV-GKNNFCALYNLSN 419 (420)
T ss_dssp TTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE-ETTTEEEEEESCC
T ss_pred CCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE-cCCceEEEEeccC
Confidence 5433222 2235567799999999999 67454 5689999999865
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-34 Score=268.61 Aligned_cols=252 Identities=16% Similarity=0.141 Sum_probs=195.7
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCC
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSD 237 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d 237 (490)
.+.+|.+.|++++|+|+| ++|++|+.|++|++||+.+++.. ....+.+|...|.+++|+|. + ++|++|+.|
T Consensus 8 ~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~-----~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D 80 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQI-----LIADLRGHEGPVWQVAWAHPMYG-NILASCSYD 80 (316)
T ss_dssp ------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEE-----EEEEEECCSSCEEEEEECCGGGS-SCEEEEETT
T ss_pred ecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcE-----EEEEEcCCCccEEEEEeCCCCCC-CEEEEEECC
Confidence 457999999999999998 89999999999999999766421 22346789999999999863 5 489999999
Q ss_pred CcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eeeeeecCCCceeEEEEe
Q psy17682 238 NNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI---EEEAVCHEGSKATRAIYL 310 (490)
Q Consensus 238 g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~s 310 (490)
++|++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||++.+.. ...+..|... +.++.|+
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~-v~~~~~~ 159 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG-CNAVSWA 159 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC-BCCCEEC
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC-cceEEEc
Confidence 999999998873 56677889999999999997 78999999999999999987632 2334466654 8889999
Q ss_pred CC-----------------CcEEEEEeCCCceeEEEEecCCCCCCCeEEE-eccCCCceeeeeecCCC----CeEEEEec
Q psy17682 311 KS-----------------GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-ELDTSNGVMFPLYDPDT----NLVYLCGK 368 (490)
Q Consensus 311 ~~-----------------~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~----~~l~~~g~ 368 (490)
|+ +.+|++|+ .|+.|++||++......... ...|...|.+++|+|++ ++| ++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs---~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l-as~s 235 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGG---CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI-ASCS 235 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCB---TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE-EEEE
T ss_pred cccCCccccccccccCccccceEEEec---CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE-EEEc
Confidence 87 46888888 68999999997543222222 23577789999999987 566 8999
Q ss_pred CCCeEEEEEecCCC---CeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 369 GDSVIRYFEITAEP---PFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 369 ~dg~i~iwd~~~~~---~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
.|++|++|++.+.. .....+. .+...|.+++|+|++.+++++ ++.+++|+.....
T Consensus 236 ~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g 295 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295 (316)
T ss_dssp TTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTS
T ss_pred CCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCC
Confidence 99999999998732 1111222 345689999999999988876 4588999987443
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.7e-33 Score=270.93 Aligned_cols=305 Identities=13% Similarity=0.163 Sum_probs=229.0
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
...+....+|...|.++.| ++ .+|++|+.||+|++||+.+++.. ..+. .+...+
T Consensus 123 ~~~~~~~~~~~~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~~~~------------------~~~~-----~h~~~v 176 (435)
T 1p22_A 123 LQRIHCRSETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLECK------------------RILT-----GHTGSV 176 (435)
T ss_dssp CCCEECCCSSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSCCEE------------------EEEC-----CCSSCE
T ss_pred ceEEecccCCCCcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCCeEE------------------EEEc-----CCCCcE
Confidence 3445566778889999988 45 88999999999999999876511 1111 123356
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
.++++... .+++++.+|.|++|++. .+ .....+.+|.+.|.+++|++ .++++|+.||.|++|
T Consensus 177 ~~l~~~~~-------~l~sg~~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 177 LCLQYDER-------VIITGSSDSTVRVWDVN-----TG---EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVW 238 (435)
T ss_dssp EEEECCSS-------EEEEEETTSCEEEEESS-----SC---CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEE
T ss_pred EEEEECCC-------EEEEEcCCCeEEEEECC-----CC---cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEE
Confidence 77777433 68889999999999985 22 34567789999999999974 589999999999999
Q ss_pred ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 273 (490)
|+.+++.... ...+.+|...|.+++| ++ .++++|+.||.|++||+++++.+..+.+|...|.+++++ ++++
T Consensus 239 d~~~~~~~~~----~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l 309 (435)
T 1p22_A 239 DMASPTDITL----RRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV 309 (435)
T ss_dssp ECSSSSCCEE----EEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEE
T ss_pred eCCCCCCcee----eeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEE
Confidence 9988765421 1235679999999999 45 489999999999999999999999999999999999994 7899
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC-------eEEEecc
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP-------IVMVELD 346 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~-------~~~~~~~ 346 (490)
++|+.||.|++||+++++++..+.+|... +.++.| ++.++++|+ .|+.|++||+.....+ .......
T Consensus 310 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~--~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 383 (435)
T 1p22_A 310 VSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCIRF--DNKRIVSGA---YDGKIKVWDLVAALDPRAPAGTLCLRTLVE 383 (435)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEC--CSSEEEEEE---TTSCEEEEEHHHHTSTTSCTTTTEEEEECC
T ss_pred EEEeCCCeEEEEECCCCCEEEEEeCCcCc-EEEEEe--cCCEEEEEe---CCCcEEEEECCCCCCccccccchheeeccC
Confidence 99999999999999999999999888775 888888 788999998 6899999998754421 2233346
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP 404 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 404 (490)
|...|.+++| ++++| ++|+.||.|++||+.+.... .......+...+.|.+
T Consensus 384 h~~~v~~l~~--~~~~l-~s~s~Dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 384 HSGRVFRLQF--DEFQI-VSSSHDDTILIWDFLNDPAA----QAEPPRSPSRTYTYIS 434 (435)
T ss_dssp CSSCCCCEEE--CSSCE-EECCSSSEEEEEC---------------------------
T ss_pred CCCCeEEEEe--CCCEE-EEEeCCCEEEEEECCCCCCc----ccCCCCCCccceeeec
Confidence 7778999999 67777 78999999999999887522 1122223555555543
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.4e-33 Score=264.74 Aligned_cols=286 Identities=13% Similarity=0.191 Sum_probs=223.3
Q ss_pred CCCCCcEEecccccceeeeEEeccCC--CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCc
Q psy17682 31 RTLTEPVVDLLYHQRRVGLVLWHPTA--QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGAN 108 (490)
Q Consensus 31 ~~~~~~~~~l~gH~~~V~~v~~~p~~--~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (490)
....+++..+.+|.+.|++++|+|++ ..+|++|+.||.|++||+.+... .
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-----------------~----------- 77 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-----------------T----------- 77 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-----------------E-----------
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-----------------e-----------
Confidence 44556788899999999999999994 48999999999999999976220 0
Q ss_pred ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC 188 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg 188 (490)
....+.+|.+.|.+++|+|++ .+|++++.||
T Consensus 78 ------------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 108 (368)
T 3mmy_A 78 ------------------------------------------------IPKAQQMHTGPVLDVCWSDDG-SKVFTASCDK 108 (368)
T ss_dssp ------------------------------------------------EEEEEEECSSCEEEEEECTTS-SEEEEEETTS
T ss_pred ------------------------------------------------eEEEeccccCCEEEEEECcCC-CEEEEEcCCC
Confidence 011356799999999999988 8999999999
Q ss_pred cEEEEECCCCCcccccccceeeecccccCEEEEEE--eeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW--HPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW 266 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 266 (490)
.|++||+.+++... ...|...|.+++| +|++. +|++++.|+.|++||+++++.+..+..+ ..+.++.+
T Consensus 109 ~v~iwd~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~ 178 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ--------IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADV 178 (368)
T ss_dssp EEEEEETTTTEEEE--------EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEE
T ss_pred cEEEEEcCCCCcee--------eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEe
Confidence 99999998876543 3349999999999 78874 8999999999999999999999988855 46777777
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcE----EEEEeCCCceeEEEEecCCCCCC---
Q psy17682 267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLI----FTTGFSKMSERQYSLRAPDHLDE--- 338 (490)
Q Consensus 267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~----l~~~~~~~~~~~i~iwd~~~~~~--- 338 (490)
. +..+++++.++.+++||++......... ........++.+.+++.. +++++ .++.+++||++....
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS---IEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE---TTSEEEEEESSCSCHHHH
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec---CCCcEEEEecCCCCcccc
Confidence 6 4588899999999999998765433322 222223666666655443 78887 689999999987632
Q ss_pred CeEEEeccCCC------------ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682 339 PIVMVELDTSN------------GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR 406 (490)
Q Consensus 339 ~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~ 406 (490)
...+. .+.. .|.+++|+|++++| ++|+.||.|++||+.+++.+ ..+. .+..+|++++|+|++
T Consensus 254 ~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~-~~~~--~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 254 NFTFK--CHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDARTKL-KTSE--QLDQPISACCFNHNG 327 (368)
T ss_dssp SEEEE--CSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEE-EECC--CCSSCEEEEEECTTS
T ss_pred ceeee--eeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCCCcEE-EEec--CCCCCceEEEECCCC
Confidence 11221 2222 69999999999998 78999999999999988632 2222 345789999999999
Q ss_pred eeEEeecc
Q psy17682 407 GCDVNSCE 414 (490)
Q Consensus 407 ~~l~~~~~ 414 (490)
.+++++++
T Consensus 328 ~~l~~~s~ 335 (368)
T 3mmy_A 328 NIFAYASS 335 (368)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEec
Confidence 99888854
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.8e-33 Score=270.22 Aligned_cols=302 Identities=14% Similarity=0.133 Sum_probs=232.9
Q ss_pred ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc-ccc
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE-DYV 123 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~ 123 (490)
.....++++|+...++++++.||.|+||++....... ..... -..+...|.+++|+| +.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~--------------~~~~~-----~~~h~~~V~~~~~~p~~~- 94 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD--------------KNVPL-----VCGHTAPVLDIAWCPHND- 94 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC--------------TTCCC-----BCCCSSCEEEEEECTTCT-
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC--------------CCCce-----EecCCCCEEEEEeCCCCC-
Confidence 3456799999886677788999999999986532000 00000 112344789999999 53
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT 203 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 203 (490)
..+++++.+|.|++|++..... ..........+.+|...|.+++|+|++.++|++++.||.|++||+.+++....
T Consensus 95 ----~~l~s~s~dg~v~vw~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 95 ----NVIASGSEDCTVMVWEIPDGGL-VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp ----TEEEEEETTSEEEEEECCTTCC-SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ----CEEEEEeCCCeEEEEEccCCCC-ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 3677889999999999862211 01112456778899999999999999867999999999999999998866554
Q ss_pred cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecCCCc-EEEEEEcCCCCEEEEE---eC
Q psy17682 204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECHPDI-VYSASWNWDGSKLLTT---CK 278 (490)
Q Consensus 204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~ 278 (490)
+. ..+|...|.+++|+|++. +|++++.|+.|++||+++++.+..+ ..|.+. +.+++|+|++++|+++ +.
T Consensus 170 ~~-----~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 170 LG-----PDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS 243 (402)
T ss_dssp EC-----TTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC
T ss_pred Ee-----cCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC
Confidence 31 045999999999999985 8999999999999999999999888 677765 8999999999999999 78
Q ss_pred CCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEeccCCCceeeeee
Q psy17682 279 DKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVELDTSNGVMFPLY 356 (490)
Q Consensus 279 dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~ 356 (490)
|+.|++||+++++. ...........+..++|+|++.++++++. .|+.|++||+.+.+. ...+....+...+.+++|
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~--~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK--GDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGY 321 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET--TCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEE
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc--CCCeEEEEEecCCCcceEeecccccCCcccceEE
Confidence 99999999998764 33333222334899999999998864431 589999999998764 334444456678999999
Q ss_pred cCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 357 DPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 357 s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+|++.++ ++ .++.+++|++.+++
T Consensus 322 sp~~~~~-~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 322 MPKRGLE-VN--KCEIARFYKLHERK 344 (402)
T ss_dssp CCGGGSC-GG--GTEEEEEEEEETTE
T ss_pred ecccccc-ee--cceeEEEEEcCCCc
Confidence 9999887 43 46799999999864
No 87
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.5e-32 Score=257.38 Aligned_cols=264 Identities=14% Similarity=0.139 Sum_probs=210.9
Q ss_pred ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeC
Q psy17682 159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGS 236 (490)
Q Consensus 159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~ 236 (490)
..+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++..... ....+.+|...|.+++|+| ++ .+|++++.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~ 79 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWE---LSDSWRAHDSSIVAIDWASPEYG-RIIASASY 79 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEE---EEEEEECCSSCEEEEEECCGGGC-SEEEEEET
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcce---ecceeccCCCcEEEEEEcCCCCC-CEEEEEcC
Confidence 4567999999999999988 8999999999999999987643321 2334667999999999999 46 59999999
Q ss_pred CCcEEEEECCCC---------eeEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeeeee--------
Q psy17682 237 DNNVAIWNVGTG---------EIMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAIEEEAV-------- 297 (490)
Q Consensus 237 dg~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------- 297 (490)
||.|++||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 999999999877 567788889999999999999 9999999999999999999887654433
Q ss_pred -----ecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC----CeEEE
Q psy17682 298 -----CHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT----NLVYL 365 (490)
Q Consensus 298 -----~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~ 365 (490)
.+.. .+.++.|+|+ +.++++++ .++.+.+|+..............|...|.+++|+|++ ++| +
T Consensus 160 ~~~~~~~~~-~~~~~~~~p~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l-~ 234 (351)
T 3f3f_A 160 SIPPANHLQ-SDFCLSWCPSRFSPEKLAVSA---LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI-A 234 (351)
T ss_dssp SCCCSSCSC-CCEEEEECCCSSSCCEEEEEE---TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE-E
T ss_pred ccccCCccc-ceeEEEeccCCCCCcEEEEec---CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE-E
Confidence 2333 4899999997 88999998 6788877777654432233333577889999999998 566 8
Q ss_pred EecCCCeEEEEEecCCCCe------------------------------------------eEEeeeee-CCCceeeEEE
Q psy17682 366 CGKGDSVIRYFEITAEPPF------------------------------------------VHYINTFQ-TPDPQRGIGM 402 (490)
Q Consensus 366 ~g~~dg~i~iwd~~~~~~~------------------------------------------~~~~~~~~-~~~~i~~~~~ 402 (490)
+|+.||.|++||+..+... ...+..+. +...|++++|
T Consensus 235 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 314 (351)
T 3f3f_A 235 TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW 314 (351)
T ss_dssp EEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEE
T ss_pred EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEE
Confidence 9999999999999875210 12233333 4578999999
Q ss_pred eeCceeEEee--cceeEEEEecCCCceEEEEE
Q psy17682 403 MPKRGCDVNS--CEIGRFFRLNNSGLCQVVSM 432 (490)
Q Consensus 403 sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~~ 432 (490)
+|++.+++++ ++.+++|++..++.++.+..
T Consensus 315 s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 315 NLTGTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp CSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred cCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence 9999988887 45889999998875665543
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=264.13 Aligned_cols=262 Identities=16% Similarity=0.155 Sum_probs=211.4
Q ss_pred cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEe
Q psy17682 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAG 235 (490)
Q Consensus 158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~ 235 (490)
..++.+|.+.|.+++|+|++ .+|++|+.||.|++|++..... .....+.+|...|++++|+|+ + .+|++++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~ 76 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCS 76 (379)
T ss_dssp -CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCGGGC-SEEEEEE
T ss_pred cEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc-----eeeeEecCCCCcEEEEEeCCCCCC-CEEEEec
Confidence 45778999999999999998 8999999999999999874321 222346679999999999877 6 4999999
Q ss_pred CCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEE
Q psy17682 236 SDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIY 309 (490)
Q Consensus 236 ~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~ 309 (490)
.||.|++||+++++ .+..+..|...|.+++|+|+ +++|++++.|+.|++||++++.. ...+..|... +.+++|
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-v~~~~~ 155 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASW 155 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC-EEEEEE
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc-eEEEEE
Confidence 99999999999987 67777889999999999999 99999999999999999998743 3344466654 999999
Q ss_pred eC-------------CCcEEEEEeCCCceeEEEEecCCCCCCCeEE--EeccCCCceeeeeecCC---CCeEEEEecCCC
Q psy17682 310 LK-------------SGLIFTTGFSKMSERQYSLRAPDHLDEPIVM--VELDTSNGVMFPLYDPD---TNLVYLCGKGDS 371 (490)
Q Consensus 310 s~-------------~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~---~~~l~~~g~~dg 371 (490)
+| ++.++++++ .++.|++||++........ ....|...|.+++|+|+ +++| ++++.||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~dg 231 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDR 231 (379)
T ss_dssp CCCC----------CTTCEEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEETTS
T ss_pred cCccccccccccCCCCCCEEEEEe---CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE-EEEeCCC
Confidence 99 689999998 6889999999876543222 22356778999999999 6776 8899999
Q ss_pred eEEEEEecCCCCee--EEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEE
Q psy17682 372 VIRYFEITAEPPFV--HYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVS 431 (490)
Q Consensus 372 ~i~iwd~~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~ 431 (490)
.|++||+.+++... .......+...|.+++|+|++.+++++ ++.+++|++......+++.
T Consensus 232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 232 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 99999999874321 222223356789999999999988876 4588999998665344443
No 89
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=250.43 Aligned_cols=244 Identities=16% Similarity=0.245 Sum_probs=193.9
Q ss_pred ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
.+|...|.+++|+|++ ++|++|+.||+|++|++++++.+.. +.+|...+.++.+. + .++++++.++.++
T Consensus 64 ~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~-------~~~h~~~~~~~~~~--~-~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRN-------MTSHSARVGSLSWN--S-YILSSGSRSGHIH 132 (318)
T ss_dssp CSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEE-------EECCSSCEEEEEEE--T-TEEEEEETTSEEE
T ss_pred cCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEE-------ecCccceEEEeecC--C-CEEEEEecCCceE
Confidence 4788999999999998 8999999999999999998876554 45688888876654 4 4899999999999
Q ss_pred EEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee----eeeeecCCCceeEEEEeCCCc-E
Q psy17682 242 IWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE----EEAVCHEGSKATRAIYLKSGL-I 315 (490)
Q Consensus 242 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~s~~~~-~ 315 (490)
+|+.... ..+..+.+|...+..+.+++++++|++++.|++|++||+++++.. .....+.+ .+..+.++|++. +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQSNV 211 (318)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS-CEEEEEECTTSTTE
T ss_pred eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC-ceEEEEecCCCCcE
Confidence 9998865 456677889999999999999999999999999999999987532 22334444 488999998854 3
Q ss_pred EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682 316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTP 394 (490)
Q Consensus 316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~ 394 (490)
+..++. ..++.|++||...... .....+...+..+.|+|+++.++++ |+.|+.|++||+.+++++ ..+. .|.
T Consensus 212 ~~~~~~-~~~~~i~lwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~-~~l~--gH~ 284 (318)
T 4ggc_A 212 LATGGG-TSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-AELK--GHT 284 (318)
T ss_dssp EEEEEC-TTTCEEEEEETTTCCE---EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-EEEC--CCS
T ss_pred EEEEec-CCCCEEEEEecccccc---cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE-EEEc--CCC
Confidence 333221 2689999999987653 3334566779999999999988543 458999999999998733 2222 356
Q ss_pred CceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682 395 DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 395 ~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~ 424 (490)
.+|++++|+|++.+++++ ++.+++|++.+.
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 799999999999999887 458999998764
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=280.09 Aligned_cols=265 Identities=13% Similarity=0.080 Sum_probs=203.1
Q ss_pred EEeeCCCceEEEECCCCCCCCcccCC-CCcceeecccCCeeEEEECCCC-----CCEEEEEeCCCcEEEEECCCCCccc-
Q psy17682 130 IRKLKSQQALSILPPPSTAPNTGRIN-ADHALVGGHKGPVLDIAWSPHD-----DNVIASGSEDCVVKVWQIPDGGISR- 202 (490)
Q Consensus 130 ~~~~~~~g~i~v~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~~~dg~i~iwd~~~~~~~~- 202 (490)
+++++.++.|++|++.. ++.. ....++.+|.+.|.+++|+|++ ..+||+++.||+|++||+.++....
T Consensus 176 laS~s~D~tI~iWd~~~-----~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNT-----STLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp ------CEEEEEEEEET-----TTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred hccCCCCceEEEEEccC-----CCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 45577899999999852 2211 0123467888999999999961 2699999999999999998765321
Q ss_pred ---ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEE--EEcCCC-CEEEE
Q psy17682 203 ---TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSA--SWNWDG-SKLLT 275 (490)
Q Consensus 203 ---~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~~ 275 (490)
....|...+.+|...|++++|++++ .|++|+.||+|++||++++ .+...+.+|...|.++ +|+|++ .+|++
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred cceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 1234455678899999999999864 7999999999999999876 4556688999999999 578887 89999
Q ss_pred EeCCCeEEEEeCCCCceeeeeeecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682 276 TCKDKKMRIINPRTGAIEEEAVCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP 354 (490)
Q Consensus 276 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 354 (490)
++.|++|+|||++++++...+.+|.. ..+.+++|+|++..+++++ .++.|++||++...+...+. .|...|.++
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~---~d~tv~lwd~~~~~~~~~l~--gH~~~V~sv 403 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD---GASSLRAVPSRAAFAVHPLV--SRETTITAI 403 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC---SSSEEEEEETTCTTCCEEEE--ECSSCEEEE
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeC---CCCcEEEEECcccccceeee--cCCCceEEE
Confidence 99999999999999888777776653 2378899999999999887 58899999999877655443 577899999
Q ss_pred eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee---eeCCCceeeEEEeeCceeE
Q psy17682 355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT---FQTPDPQRGIGMMPKRGCD 409 (490)
Q Consensus 355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l 409 (490)
+|+|+|++| ++|+.||+|++||+.... ...... ......+.+++|+|++..+
T Consensus 404 a~Sp~g~~l-~Sgs~Dgtv~lwd~~~~~--~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 404 GVSRLHPMV-LAGSADGSLIITNAARRL--LHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp ECCSSCCBC-EEEETTTEEECCBSCSST--TTCC------CCCCEEEECBCCSSSCEE
T ss_pred EeCCCCCeE-EEEECCCEEEEEechHhh--ccccccCccceeeeEEEEeccCCCCCeE
Confidence 999999998 799999999999986542 111110 1111246799999999854
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-33 Score=268.17 Aligned_cols=246 Identities=13% Similarity=0.187 Sum_probs=202.4
Q ss_pred ccceeeeEEeccCCC---ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 43 HQRRVGLVLWHPTAQ---NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 43 H~~~V~~v~~~p~~~---~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
|...|++++|+|++. .+|++|+.||.|++||+.+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----------------------------------------- 106 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ----------------------------------------- 106 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-----------------------------------------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-----------------------------------------
Confidence 668899999999942 699999999999999987643
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEECCCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
....+.+|.+.|.+++|+| ++ .+|++|+.||.|++||++++
T Consensus 107 -------------------------------------~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 107 -------------------------------------CIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp -------------------------------------EEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTT
T ss_pred -------------------------------------EeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecC
Confidence 0113457999999999999 55 89999999999999999888
Q ss_pred CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----------------------
Q psy17682 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE----------------------- 255 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----------------------- 255 (490)
+....+.. +.+|...|.+++|+|++. +|++++.||.|++||+++++.+..+.
T Consensus 149 ~~~~~~~~----~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 149 TLVAIFGG----VEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp EEEEEECS----TTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred eEEEEecc----cccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 76554321 246999999999999985 99999999999999998776443333
Q ss_pred -----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------eeeeeecCCCceeEEEEeCC--Cc
Q psy17682 256 -----CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--------------EEEAVCHEGSKATRAIYLKS--GL 314 (490)
Q Consensus 256 -----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~s~~--~~ 314 (490)
.|...|.+++|+ +++|++++.|+.|++||++++.. +..+..|... +.+++|+|+ ++
T Consensus 224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~ 300 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD-IWYMRFSMDFWQK 300 (366)
T ss_dssp EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC-SSCCCCEECTTSS
T ss_pred cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc-EEEEEEcCCCCCc
Confidence 389999999998 77999999999999999987754 5666677665 899999999 99
Q ss_pred EEEEEeCCCceeEEEEecCCCCCCCe-EE-EeccC--CCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682 315 IFTTGFSKMSERQYSLRAPDHLDEPI-VM-VELDT--SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 315 ~l~~~~~~~~~~~i~iwd~~~~~~~~-~~-~~~~~--~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
+|++|+ .++.|++||+.+.+... .. ....+ ...|.+++|+|++++| ++++.||.|++||+.
T Consensus 301 ~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 301 MLALGN---QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-IAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEEC---TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-EEEETTSEEEEEEC-
T ss_pred EEEEEe---cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-EEEeCCCEEEEEEec
Confidence 999998 68999999999865432 11 22223 5789999999999998 789999999999985
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=293.65 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=207.3
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
...+.||.+.|++++|+|++ .+|++|+.||+|++||+..+..
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~------------------------------------- 43 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH------------------------------------- 43 (753)
T ss_dssp ------CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-------------------------------------
T ss_pred eeecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-------------------------------------
Confidence 35689999999999999999 8999999999999999864210
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEEE
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd 194 (490)
.....+.+|.++|.+++|+|+ + ++|++|+.||.|++||
T Consensus 44 ---------------------------------------~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 44 ---------------------------------------KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWK 83 (753)
T ss_dssp ---------------------------------------EEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEE
T ss_pred ---------------------------------------ccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEE
Confidence 011245689999999999987 6 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcC--
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNW-- 268 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~-- 268 (490)
+.+++.. ....+.+|...|.+++|+|+ + .++++|+.||.|++||++++. ....+.+|...|.+++|+|
T Consensus 84 ~~~~~~~-----~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 84 EENGRWS-----QIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EETTEEE-----EEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred CCCCccc-----ccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 9876521 22335669999999999999 7 499999999999999998773 4456678999999999999
Q ss_pred -----------CCCEEEEEeCCCeEEEEeCCCC----ceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEE
Q psy17682 269 -----------DGSKLLTTCKDKKMRIINPRTG----AIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSL 330 (490)
Q Consensus 269 -----------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~i 330 (490)
++..+++++.||.|++||++++ .....+.+|... +.+++|+|+ +.++++|+ .|+.|++
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-V~~l~~sp~~~~~~~l~s~s---~Dg~I~i 233 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYLASVS---QDRTCII 233 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---SSSCEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-EEEEEeccCCCCCCEEEEEe---cCCEEEE
Confidence 5899999999999999999887 345566677765 999999999 89999998 6899999
Q ss_pred ecCCCCCCCeE---EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 331 RAPDHLDEPIV---MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 331 wd~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
||+++...... .....+...|.+++|+|+|+++ ++|+.||.|++|++..
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCE-EEECSSSCEECCBCCS
T ss_pred ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEE-EEEcCCCEEEEEecCC
Confidence 99987643221 1122466779999999999998 7889999999999984
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-32 Score=265.53 Aligned_cols=253 Identities=9% Similarity=0.004 Sum_probs=199.5
Q ss_pred eeecccCCeeEEEECCCCCCE-EEEEeCCCcEEEEECC--CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNV-IASGSEDCVVKVWQIP--DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS 236 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~-l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 236 (490)
...+|.+.|.+++|+|++ .+ +++|+.||.|++||+. +++....+. ...|...|.+++|+|++. +|++|+.
T Consensus 97 ~~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~v~~~~~sp~~~-~l~~~~~ 169 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRK-----RFCFSKRPNAISIAEDDT-TVIIADK 169 (450)
T ss_dssp ---CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEE-----EEECSSCEEEEEECTTSS-EEEEEET
T ss_pred CCCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeee-----cccCCCCceEEEEcCCCC-EEEEEeC
Confidence 345788899999999998 56 5999999999999998 776655432 124778999999999995 9999999
Q ss_pred CCcEEEEECCCCeeEE----EEecCCCcEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeeee-eecCCCceeEEE
Q psy17682 237 DNNVAIWNVGTGEIMI----QIECHPDIVYSASWNWD---GSKLLTTCKDKKMRIINPRTGAIEEEA-VCHEGSKATRAI 308 (490)
Q Consensus 237 dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 308 (490)
+|.|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ .+|... +.+++
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~ 248 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSIC 248 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEE
Confidence 9999999998876543 67789999999999999 999999999999999999999888774 467664 99999
Q ss_pred EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-----------------------cCCCceeeeeecCCCCeEEE
Q psy17682 309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-----------------------DTSNGVMFPLYDPDTNLVYL 365 (490)
Q Consensus 309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~~~~~l~~ 365 (490)
|+ ++.+|++++ .|+.|++||+++++....+... .....+..++|+|++++|++
T Consensus 249 ~s-d~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 249 CG-KDYLLLSAG---GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp EC-STTEEEEEE---SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred EC-CCCEEEEEe---CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 99 999999998 6899999999987644333211 12345889999999999955
Q ss_pred EecCCCeEEEEEe--cCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--------eeEEEEecCCC
Q psy17682 366 CGKGDSVIRYFEI--TAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--------IGRFFRLNNSG 425 (490)
Q Consensus 366 ~g~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--------~~~~~~~~~~~ 425 (490)
++..|+.|++|++ ..+. ....+..+..+..+.+++|+|++.+++.++. .+++|.+....
T Consensus 325 ~~~~d~~i~iw~~~~~~~~-~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 325 FVEATKCIIILEMSEKQKG-DLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp EETTCSEEEEEEECSSSTT-CEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred EECCCCeEEEEEeccCCCC-ceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 5448999999999 4442 2234444555578999999997655554432 36888877543
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-31 Score=260.44 Aligned_cols=293 Identities=16% Similarity=0.184 Sum_probs=237.3
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+..+ .+.+..+.+|.+.|.+++|++ .+|++|+.||+|++||+.+++. ...+.
T Consensus 141 i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~------------------~~~~~-- 196 (445)
T 2ovr_B 141 LKVWSAVT-GKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGEC------------------IHTLY-- 196 (445)
T ss_dssp EEEEETTT-CCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEE------------------EEEEC--
T ss_pred EEEEECCC-CcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcE------------------EEEEC--
Confidence 34455432 356778999999999999983 6899999999999999987641 11111
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG 184 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~ 184 (490)
.+...+.++++++. .+++++.+|.+.+|++. . ......+.+|...|.+++| ++ .++++|
T Consensus 197 ---~h~~~v~~~~~~~~-------~l~s~s~dg~i~~wd~~-----~---~~~~~~~~~~~~~v~~~~~--~~-~~l~~~ 255 (445)
T 2ovr_B 197 ---GHTSTVRCMHLHEK-------RVVSGSRDATLRVWDIE-----T---GQCLHVLMGHVAAVRCVQY--DG-RRVVSG 255 (445)
T ss_dssp ---CCSSCEEEEEEETT-------EEEEEETTSEEEEEESS-----S---CCEEEEEECCSSCEEEEEE--CS-SCEEEE
T ss_pred ---CCCCcEEEEEecCC-------EEEEEeCCCEEEEEECC-----C---CcEEEEEcCCcccEEEEEE--CC-CEEEEE
Confidence 12335778888655 47889999999999985 2 2345677899999999999 35 789999
Q ss_pred eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA 264 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~ 264 (490)
+.||.|++||+++++.+.. +.+|...|.++.| ++ ..+++++.|+.|++||+++++.+..+.+|...+.++
T Consensus 256 ~~dg~i~iwd~~~~~~~~~-------~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHT-------LQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEE-------ECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred cCCCEEEEEECCCCcEeEE-------ecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence 9999999999988765544 4569999999999 55 489999999999999999999999999999999988
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682 265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV 341 (490)
Q Consensus 265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~ 341 (490)
.++ ++++++++.||.|++||+++++.+..+.. |.. .+.+++|+ +.++++|+ .|+.|++||+.+++....
T Consensus 326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~--~~~l~s~~---~dg~v~iwd~~~~~~~~~ 397 (445)
T 2ovr_B 326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFN--KNFVITSS---DDGTVKLWDLKTGEFIRN 397 (445)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS-CEEEEEEC--SSEEEEEE---TTSEEEEEETTTCCEEEE
T ss_pred EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC-CEEEEEEC--CCEEEEEe---CCCeEEEEECCCCceeee
Confidence 885 67999999999999999999999888875 444 48888885 67888888 689999999998764433
Q ss_pred EEe---ccCCCceeeeeecCCCCeEEEEecCCCe----EEEEEecCC
Q psy17682 342 MVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSV----IRYFEITAE 381 (490)
Q Consensus 342 ~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~----i~iwd~~~~ 381 (490)
+.. ..+...|.+++|+|++.++ ++|+.||. |.+||+...
T Consensus 398 ~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 398 LVTLESGGSGGVVWRIRASNTKLVC-AVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEECTTGGGTCEEEEEEECSSEEEE-EEECSSSSSCCEEEEEECCCC
T ss_pred eeccccCCCCceEEEEEecCCEEEE-EEcccCCCCccEEEEEECCCC
Confidence 322 2456679999999999888 78999997 999999764
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.3e-33 Score=267.42 Aligned_cols=250 Identities=12% Similarity=0.126 Sum_probs=196.3
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC--CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG--GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
....|.++|++++|+|++ ++|++|+.|+.|++||+.++ +.... +.+|...|.+++|+|++. +|++++.|
T Consensus 6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~-------~~~h~~~v~~~~~s~~~~-~l~s~s~d 76 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWKHART-------FSDHDKIVTCVDWAPKSN-RIVTCSQD 76 (377)
T ss_dssp EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEEECCC-------BCCCSSCEEEEEECTTTC-CEEEEETT
T ss_pred eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceEEEEE-------EecCCceEEEEEEeCCCC-EEEEEeCC
Confidence 345577899999999988 89999999999999999876 33333 556999999999999985 89999999
Q ss_pred CcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeeeeee-cCCCceeEEEEe
Q psy17682 238 NNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA---IEEEAVC-HEGSKATRAIYL 310 (490)
Q Consensus 238 g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~~~~~~~~s 310 (490)
+.|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |... +.+++|+
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~-v~~~~~~ 155 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST-ILSLDWH 155 (377)
T ss_dssp SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC-EEEEEEC
T ss_pred CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC-eEEEEEc
Confidence 999999999877 667777899999999999999999999999999999999887 3666666 6654 9999999
Q ss_pred CCCcEEEEEeCCCceeEEEEecCCCCCC---------------CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682 311 KSGLIFTTGFSKMSERQYSLRAPDHLDE---------------PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY 375 (490)
Q Consensus 311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~---------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i 375 (490)
|++++|++++ .|+.|++||+..... ......+.|...|.+++|+|++++| ++++.||.|++
T Consensus 156 ~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i 231 (377)
T 3dwl_C 156 PNNVLLAAGC---ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-AYAGHDSSVTI 231 (377)
T ss_dssp TTSSEEEEEE---SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE-EEEETTTEEC-
T ss_pred CCCCEEEEEe---CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEE-EEEeCCCcEEE
Confidence 9999999998 689999999863220 1122333677789999999999998 78999999999
Q ss_pred EEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeecc-eeEEEEecC
Q psy17682 376 FEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNN 423 (490)
Q Consensus 376 wd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~ 423 (490)
||+.+++.....+..+. +..+|.+++|+|++.+++++++ ...+|....
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 232 AYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred EECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 99999875333233333 4568999999999999888854 445666554
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4e-32 Score=258.95 Aligned_cols=298 Identities=10% Similarity=0.033 Sum_probs=212.7
Q ss_pred cCCeeEeccccccceEEEEEeeCC-------CceEEEECCCCCCCCcccCC--CCcceeecccCCeeEEEECCCCCCEEE
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKS-------QQALSILPPPSTAPNTGRIN--ADHALVGGHKGPVLDIAWSPHDDNVIA 182 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~-------~g~i~v~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~p~~~~~l~ 182 (490)
.|.+++|+|+. .+++++++ ++.|++|++........... .....+.+|...|.++++++ ..++
T Consensus 16 PV~sv~fs~dg-----~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~ 87 (365)
T 4h5i_A 16 PAYGAKFLNND-----TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIIL 87 (365)
T ss_dssp CEEEEEEEETT-----EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEE
T ss_pred CEEEEEEeCCC-----cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEE
Confidence 68999999996 45555543 33699998863221111000 01124678999999998864 4566
Q ss_pred EE-----------eCCCcEEEEECCCCCcccccccce--eeecccccCEEEEEEeeCCCCEEE--EEeCCCcEEEEECCC
Q psy17682 183 SG-----------SEDCVVKVWQIPDGGISRTLTEPV--VDLLYHQRRVGLVLWHPTAQNVLL--TAGSDNNVAIWNVGT 247 (490)
Q Consensus 183 s~-----------~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~--s~~~dg~v~iwd~~~ 247 (490)
+| +.|+.+++|++............. .....+...+.+++|+|+|+ +++ +++.|++|+|||+++
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~ 166 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT-VAAIASSKVPAIMRIIDPSD 166 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-CEEEEESCSSCEEEEEETTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCC
Confidence 55 457789999987654322211110 11223556789999999996 554 444789999999999
Q ss_pred CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCceeEEEEeCCCcEEEEEeCCC-c
Q psy17682 248 GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKATRAIYLKSGLIFTTGFSKM-S 324 (490)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~-~ 324 (490)
++.+..+. |...|.+++|+|+|+++++++. +.+++|+..+++.+.... .|.. .+.+++|+|++.++++++.++ .
T Consensus 167 ~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 167 LTEKFEIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNW-SLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp TEEEEEEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTE-EEEEEEEEETTEEEEEEEESSSC
T ss_pred CcEEEEeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCC-CEEEEEEcCCCCEEEEEecCCcc
Confidence 99998887 7788999999999999999885 456677777776554332 4444 489999999999999887432 2
Q ss_pred eeEEEEecCCCCCCCeE--EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682 325 ERQYSLRAPDHLDEPIV--MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM 402 (490)
Q Consensus 325 ~~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 402 (490)
...+++|++........ .....+...|.+++|+|||++| ++|+.|+.|+|||+.+++++...+. .|..+|++++|
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l-asgs~D~~V~iwd~~~~~~~~~~~~--gH~~~V~~v~f 320 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA-VLASNDNSIALVKLKDLSMSKIFKQ--AHSFAITEVTI 320 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE-EEEETTSCEEEEETTTTEEEEEETT--SSSSCEEEEEE
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce-EEEcCCCEEEEEECCCCcEEEEecC--cccCCEEEEEE
Confidence 23688899876543221 1223567789999999999998 8999999999999999874322222 35679999999
Q ss_pred eeCceeEEee--cceeEEEEecCC
Q psy17682 403 MPKRGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 403 sp~~~~l~~~--~~~~~~~~~~~~ 424 (490)
+|||.+|+++ ++.+|+|++..+
T Consensus 321 Spdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 321 SPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999987 569999998654
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-31 Score=262.64 Aligned_cols=273 Identities=12% Similarity=0.131 Sum_probs=226.0
Q ss_pred CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682 113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV 192 (490)
Q Consensus 113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i 192 (490)
+.++.++++ .+++++.+|.|++|++. .+ +....+.+|.+.|.+++|+|++ ++++|+.||+|++
T Consensus 125 ~~~~~~~~~-------~l~sgs~dg~i~vwd~~-----~~---~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~v 187 (464)
T 3v7d_B 125 ITCLQFEDN-------YVITGADDKMIRVYDSI-----NK---KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRV 187 (464)
T ss_dssp EEEEEEETT-------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEE
T ss_pred EEEEEECCC-------EEEEEcCCCcEEEEECC-----CC---cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEE
Confidence 345666544 68889999999999985 22 2456778999999999999865 8999999999999
Q ss_pred EECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCee--------------------
Q psy17682 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEI-------------------- 250 (490)
Q Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~-------------------- 250 (490)
||+++++.... +.+|...|.+++|++ ++ .++++|+.|+.|++||+++++.
T Consensus 188 wd~~~~~~~~~-------~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 188 WDIKKGCCTHV-------FEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp EETTTTEEEEE-------ECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred EECCCCcEEEE-------ECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 99998866554 456999999999996 44 5899999999999999987652
Q ss_pred ---EEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682 251 ---MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327 (490)
Q Consensus 251 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~ 327 (490)
+..+.+|...+.++ +++++++++++.||.|++||+++++++..+.+|... +.+++|+|++.++++|+ .|+.
T Consensus 260 ~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~---~dg~ 333 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISAS---MDTT 333 (464)
T ss_dssp TTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEE---TTSC
T ss_pred eEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEe---CCCc
Confidence 45567888888887 567899999999999999999999999999888775 99999999999999998 6899
Q ss_pred EEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce
Q psy17682 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG 407 (490)
Q Consensus 328 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~ 407 (490)
|++||+++++.... ...|...|.++.|+ ++++ ++|+.||.|++||+.+++. .....+...+..++|+|++.
T Consensus 334 i~vwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 334 IRIWDLENGELMYT--LQGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDN 404 (464)
T ss_dssp EEEEETTTTEEEEE--ECCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSS
T ss_pred EEEEECCCCcEEEE--EeCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCC
Confidence 99999988653222 23567789999997 4676 7899999999999998762 23334556788899999999
Q ss_pred eEEee-cceeEEEEecCCC
Q psy17682 408 CDVNS-CEIGRFFRLNNSG 425 (490)
Q Consensus 408 ~l~~~-~~~~~~~~~~~~~ 425 (490)
+++++ ++.+++|++.+++
T Consensus 405 ~l~~~~dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 405 ILVSGSENQFNIYNLRSGK 423 (464)
T ss_dssp EEEEEETTEEEEEETTTCC
T ss_pred EEEEecCCeEEEEECCCCc
Confidence 88877 5589999999887
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.8e-32 Score=264.62 Aligned_cols=268 Identities=13% Similarity=0.162 Sum_probs=206.5
Q ss_pred eeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682 25 LTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG 103 (490)
Q Consensus 25 ~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (490)
+..|+..... .....+.||.+.|++|+|+|.+..+|+|||.||+|++||++.+.. .... .
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~----------------~~~~---~ 204 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL----------------RVFA---S 204 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE----------------EEEE---C
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce----------------eEEe---c
Confidence 5667765443 345568899999999999996558999999999999999976431 0000 0
Q ss_pred CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682 104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS 183 (490)
Q Consensus 104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s 183 (490)
.......+.+++|+|+. ..+++++.+|.|.+|++. ...+..+.+|.+.|.+++|+|++..+|++
T Consensus 205 --~~~~~~~~~~~~~~~~~-----~~l~~g~~dg~i~~wd~~---------~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 205 --SDTINIWFCSLDVSASS-----RMVVTGDNVGNVILLNMD---------GKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp --CSSCSCCCCCEEEETTT-----TEEEEECSSSBEEEEESS---------SCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred --cCCCCccEEEEEECCCC-----CEEEEEeCCCcEeeeccC---------cceeEEEecccceEEeeeecCCCceEEEE
Confidence 11122356788999885 367889999999999985 12345678999999999999998779999
Q ss_pred EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC----
Q psy17682 184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD---- 259 (490)
Q Consensus 184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---- 259 (490)
|+.|++|++||+++.+....+.. ..+|...|++++|+|++. +|++++.||.|++||+++++....+..|..
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred ecCcceeeEEecccccccceEEE----eeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 99999999999988765544322 456999999999999995 999999999999999999887777765543
Q ss_pred --cEEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeeeeee-cCCCceeEE-EEeCCCcEEEEEeCCC
Q psy17682 260 --IVYSASWNWDGSKLLTTC------------KDKKMRIINPRTGAIEEEAVC-HEGSKATRA-IYLKSGLIFTTGFSKM 323 (490)
Q Consensus 260 --~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~-~~s~~~~~l~~~~~~~ 323 (490)
.+....|+|++..+++++ .++.|++||..+++.+..+.. |... +.++ +|+|+|.+|++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-v~s~~~fspdg~~lasg~--- 419 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-ISSLNEFNPMGDTLASAM--- 419 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-CCCEEEECTTSSCEEEEC---
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-EEEEEEECCCCCEEEEEc---
Confidence 234567888877777764 235799999999998888764 4444 6655 7999999999885
Q ss_pred ceeEEEEecCCCCC
Q psy17682 324 SERQYSLRAPDHLD 337 (490)
Q Consensus 324 ~~~~i~iwd~~~~~ 337 (490)
++.|+||+++.++
T Consensus 420 -d~~i~iW~~~~gk 432 (435)
T 4e54_B 420 -GYHILIWSQQEAR 432 (435)
T ss_dssp -SSEEEECCCC---
T ss_pred -CCcEEEEECCcCe
Confidence 6789999998764
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-31 Score=251.82 Aligned_cols=249 Identities=16% Similarity=0.209 Sum_probs=209.2
Q ss_pred cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
...+.+|.+.|++++|+|++ .+|++|+.||.|++||+.+++.+.. +.+|...|.+++|+|++. +|++++.|
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~~~d 95 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGERLGT-------LDGHTGTIWSIDVDCFTK-YCVTGSAD 95 (369)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCCEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCchhhhh-------hhhcCCcEEEEEEcCCCC-EEEEEeCC
Confidence 34578999999999999988 8999999999999999998876554 456999999999999985 99999999
Q ss_pred CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce-----------eeeeeecCC
Q psy17682 238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAI-----------EEEAVCHEG 301 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~-----------~~~~~~~~~ 301 (490)
|.|++||+.+++.+..+. +...+.+++|+|+++++++++.+ +.|++||++.... ...+..+..
T Consensus 96 g~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp TEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred CeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 999999999999998888 88999999999999999999998 9999999987643 223333333
Q ss_pred -CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 302 -SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 302 -~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
..+.+++|+|++++|++++ .++.|++||+++...... ....+...|.+++|+|++++| ++++.|+.|++||+.+
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGH---KDGKISKYDVSNNYEYVD-SIDLHEKSISDMQFSPDLTYF-ITSSRDTNSFLVDVST 249 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEE---TTSEEEEEETTTTTEEEE-EEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred ccceeEEEEcCCCCEEEEEc---CCCEEEEEECCCCcEeEE-EEecCCCceeEEEECCCCCEE-EEecCCceEEEEECCC
Confidence 1499999999999999998 689999999987433222 223466789999999999998 7888999999999999
Q ss_pred CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc----------------eeEEEEecCCC
Q psy17682 381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE----------------IGRFFRLNNSG 425 (490)
Q Consensus 381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----------------~~~~~~~~~~~ 425 (490)
++ .+..+.+..++..++|+|++.++++++. .+++|++..+.
T Consensus 250 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 250 LQ----VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp CC----EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred Cc----eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 87 3444456778999999999999887743 56788887776
No 100
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.5e-31 Score=253.93 Aligned_cols=257 Identities=13% Similarity=0.124 Sum_probs=203.1
Q ss_pred cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
...+.+|.+.|.+++|+|++..+|++|+.||.|++||+.+++....+. ..+|...|.+++|+|++..+|++++.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ-----GMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC-----CCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee-----cCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 446679999999999999876899999999999999998877654332 346999999999999433599999999
Q ss_pred CcEEEEECCCCeeEEEEecC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682 238 NNVAIWNVGTGEIMIQIECH---PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL 314 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 314 (490)
+.|++||++. +.+..+..+ ...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|... +.+++|+|++.
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~-v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAK-VTHAEFNPRCD 217 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSC-EEEEEECSSCT
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCc-EEEEEECCCCC
Confidence 9999999985 555555543 478999999999999999999999999999 57778888888875 99999999998
Q ss_pred -EEEEEeCCCceeEEEEecCCCCCCC-eEEEeccCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682 315 -IFTTGFSKMSERQYSLRAPDHLDEP-IVMVELDTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391 (490)
Q Consensus 315 -~l~~~~~~~~~~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~ 391 (490)
++++++ .|+.|++||+++.... .......|...|.+++|+| ++++| ++++.|+.|++||+.+++.........
T Consensus 218 ~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 218 WLMATSS---VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL-LTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp TEEEEEE---TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE-EEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CEEEEEe---CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEE-EEEcCCCcEEEEECCCCcccccccccc
Confidence 899988 6899999999974321 2333346778899999999 99998 788999999999999877433222110
Q ss_pred ----eCC----------CceeeEEEeeCceeEEeecceeEEEEecCCCc
Q psy17682 392 ----QTP----------DPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGL 426 (490)
Q Consensus 392 ----~~~----------~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~ 426 (490)
.+. ..+..++|+|++.+..+.++.+++|++.+++.
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCE
T ss_pred ccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCce
Confidence 111 23444666677666112256889999998873
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2e-30 Score=252.54 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=217.4
Q ss_pred eeeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682 24 RLTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG 102 (490)
Q Consensus 24 ~~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (490)
.+..|+..+.. ..+..+.+|...|++|+|+|++ .+|++|+.||+|+|||+.++.. .....+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~-----------------~~~~~~ 187 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR-----------------LRNMTS 187 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE-----------------EEEECC
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcE-----------------EEEEeC
Confidence 46677776543 2344567899999999999999 8999999999999999988641 111111
Q ss_pred CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682 103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA 182 (490)
Q Consensus 103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~ 182 (490)
+...+.++++++. .+++++.++.+.+|+.. . .......+.+|...+.++.|+|++ .+++
T Consensus 188 ------h~~~v~~~s~~~~-------~l~sgs~d~~i~~~d~~----~---~~~~~~~~~~h~~~~~~~~~~~~g-~~l~ 246 (420)
T 4gga_A 188 ------HSARVGSLSWNSY-------ILSSGSRSGHIHHHDVR----V---AEHHVATLSGHSQEVCGLRWAPDG-RHLA 246 (420)
T ss_dssp ------CSSCEEEEEEETT-------EEEEEETTSEEEEEETT----S---SSCEEEEEECCSSCEEEEEECTTS-SEEE
T ss_pred ------CCCceEEEeeCCC-------EEEEEeCCCceeEeeec----c---cceeeEEecccccceeeeeecCCC-Ceee
Confidence 1224556666554 67889999999999875 1 122456788999999999999998 8999
Q ss_pred EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE--eCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682 183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA--GSDNNVAIWNVGTGEIMIQIECHPDI 260 (490)
Q Consensus 183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~ 260 (490)
+++.|+.+++|+..+++... .+......|...|.+++|+|.+.++++++ +.|++|++||+.+++.+..+.. ...
T Consensus 247 s~~~D~~v~i~~~~~~~~~~---~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~~~ 322 (420)
T 4gga_A 247 SGGNDNLVNVWPSAPGEGGW---VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQ 322 (420)
T ss_dssp EEETTSCEEEEESSCCSSCS---CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-SSC
T ss_pred eeeccccceEEeeccccccc---eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-ccc
Confidence 99999999999998776432 22334566999999999999988788765 4799999999999999988884 567
Q ss_pred EEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682 261 VYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE 338 (490)
Q Consensus 261 v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~ 338 (490)
+.++.|+|+++.+++++ .|+.|++||+++++++.++.+|.+. |.+++|+|+|.+|++|+ .|++|++||+.....
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-V~~l~~spdg~~l~S~s---~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAA---ADETLRLWRCFELDP 398 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEE---TTTEEEEECCSCSSC
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---cCCeEEEEECCCCCc
Confidence 99999999999888876 6899999999999999999999885 99999999999999998 799999999986543
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-30 Score=242.33 Aligned_cols=256 Identities=20% Similarity=0.250 Sum_probs=210.3
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK 104 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (490)
+..|+.. .......+.+|...|.+++|+|++ .+|++++.|+.|++|++.....
T Consensus 41 v~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~------------------------- 93 (313)
T 3odt_A 41 VRLWSKD-DQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSG------------------------- 93 (313)
T ss_dssp EEEEEES-SSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTT-------------------------
T ss_pred EEEEECC-CCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCC-------------------------
Confidence 5556653 345667788999999999999999 8999999999999999876330
Q ss_pred CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682 105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG 184 (490)
Q Consensus 105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~ 184 (490)
......+.+|...|.+++|. + .+++++
T Consensus 94 --------------------------------------------------~~~~~~~~~~~~~i~~~~~~--~-~~l~~~ 120 (313)
T 3odt_A 94 --------------------------------------------------EDPLYTLIGHQGNVCSLSFQ--D-GVVISG 120 (313)
T ss_dssp --------------------------------------------------SCC-CEECCCSSCEEEEEEE--T-TEEEEE
T ss_pred --------------------------------------------------CCcccchhhcccCEEEEEec--C-CEEEEE
Confidence 00122456899999999994 4 799999
Q ss_pred eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEE
Q psy17682 185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVY 262 (490)
Q Consensus 185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~ 262 (490)
+.||.|++|| .++. ...+..|...+.++.|.| ++ .++++++.|+.|++|| .++....+.. |...+.
T Consensus 121 ~~d~~i~~~d--~~~~-------~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~ 188 (313)
T 3odt_A 121 SWDKTAKVWK--EGSL-------VYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVR 188 (313)
T ss_dssp ETTSEEEEEE--TTEE-------EEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEE
T ss_pred eCCCCEEEEc--CCcE-------EEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEe--cCceEEEEeccCcccEE
Confidence 9999999999 3322 233556999999999999 55 5999999999999999 4566777776 899999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682 263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342 (490)
Q Consensus 263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~ 342 (490)
+++|+|++. +++++.||.|++||+++++.+..+..|... +.+++|+|++. +++++ .++.|++||+++.+....+
T Consensus 189 ~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~-l~~~~---~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 189 HLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF-VYCIKLLPNGD-IVSCG---EDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp EEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTSC-EEEEE---TTSEEEEECTTTCCEEEEE
T ss_pred EEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce-EEEEEEecCCC-EEEEe---cCCEEEEEECCCCceeEEE
Confidence 999999988 999999999999999999999999888775 99999999995 66666 6899999999987643332
Q ss_pred EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..+...+.+++|+|++++ ++++.||.|++||+.+++
T Consensus 263 --~~~~~~i~~~~~~~~~~~--~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 263 --TLPAISIWSVDCMSNGDI--IVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp --ECSSSCEEEEEECTTSCE--EEEETTSCEEEEESCGGG
T ss_pred --eccCceEEEEEEccCCCE--EEEeCCCcEEEEeCCCCc
Confidence 245568999999999984 468899999999999876
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.6e-31 Score=249.32 Aligned_cols=286 Identities=10% Similarity=0.069 Sum_probs=203.9
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.++..+.+|.+.|++++|+|++ .+|++|+.|+ ++||++..+.. .... .. ..+.
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~-----------------~~~~-~~-------~~~~ 62 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAH-----------------IMSQ-EM-------RHLS 62 (355)
T ss_dssp ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEE-----------------EEEE-EC-------SCCC
T ss_pred CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcce-----------------eeee-ec-------CCeE
Confidence 4555679999999999999999 7888888765 68999876431 0000 00 0244
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
.+++.++. ...+.+++.++.+++|+.. .++ .+..+. |...|.+++|+++ .++++. |+.|++||
T Consensus 63 ~~~~~~~~----~~~~~~~~~d~~v~iWd~~-----~~~---~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~i~i~d 125 (355)
T 3vu4_A 63 KVRMLHRT----NYVAFVTGVKEVVHIWDDV-----KKQ---DVSRIK-VDAPVKDLFLSRE---FIVVSY-GDVISVFK 125 (355)
T ss_dssp EEEECTTS----SEEEEECSSTTEEEEEETT-----TTE---EEEEEE-CSSCEEEEEECSS---EEEEEE-TTEEEEEE
T ss_pred EEEEcCCC----CEEEEEECCccEEEEEECC-----CCc---EEEEEE-CCCceEEEEEcCC---EEEEEE-cCEEEEEE
Confidence 55665543 1234567778999999985 222 233443 6779999999974 344443 78999999
Q ss_pred CCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEE--EeCCCcEEEEECCCCe---------------e-EEEEe
Q psy17682 195 IPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT--AGSDNNVAIWNVGTGE---------------I-MIQIE 255 (490)
Q Consensus 195 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s--~~~dg~v~iwd~~~~~---------------~-~~~~~ 255 (490)
+.++ +.+..+.. ....+++++ . +++. |+.||.|++||+++++ + +..+.
T Consensus 126 ~~~~~~~~~~~~~----------~~~~~~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~ 192 (355)
T 3vu4_A 126 FGNPWKRITDDIR----------FGGVCEFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK 192 (355)
T ss_dssp SSTTCCBSSCCEE----------EEEEEEEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEEC
T ss_pred CCCCceeeEEecc----------CCceEEEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE
Confidence 9887 55554321 344556666 2 5555 5889999999998765 2 67788
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCceeeeee-e-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682 256 CHPDIVYSASWNWDGSKLLTTCKDKK-MRIINPRTGAIEEEAV-C-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA 332 (490)
Q Consensus 256 ~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd 332 (490)
+|...|.+++|+|++++|++++.|++ |++||+++++++.++. + |.. .+.+++|+|+|++|++++ .|+.|++||
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s---~d~~v~iw~ 268 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVS---DKWTLHVFE 268 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEE---TTCEEEEEE
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEE---CCCEEEEEE
Confidence 99999999999999999999999998 9999999999999998 4 665 499999999999999998 689999999
Q ss_pred CCCCCCCeEEE-------------------ecc--CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 333 PDHLDEPIVMV-------------------ELD--TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 333 ~~~~~~~~~~~-------------------~~~--~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
++......... ... .......++|+++++.| ++++.||.+++|++..++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l-~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 269 IFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV-VVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE-EEETTTTEEEEEEEEEET
T ss_pred ccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE-EEEeCCCeEEEEEEEcCC
Confidence 97643211100 011 11223678999999998 788899999999998754
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.5e-31 Score=251.46 Aligned_cols=249 Identities=11% Similarity=0.107 Sum_probs=202.2
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN 239 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 239 (490)
.+..|.++|.+++|+|++ ++|++|+.|+.|++||+.+++. .....+.+|...|.+++|+|++. +|++++.|+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~ 75 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRN 75 (372)
T ss_dssp EEESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred eecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCe
Confidence 345699999999999998 8999999999999999987651 12233557999999999999985 9999999999
Q ss_pred EEEEECCCCeeEEEE--ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeee-eecCCCceeEEEEeCCC
Q psy17682 240 VAIWNVGTGEIMIQI--ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI---EEEA-VCHEGSKATRAIYLKSG 313 (490)
Q Consensus 240 v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~-~~~~~~~~~~~~~s~~~ 313 (490)
|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ ..|.. .+.+++|+|++
T Consensus 76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 154 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNS 154 (372)
T ss_dssp EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTS
T ss_pred EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEEEcCCC
Confidence 999999888755444 56889999999999999999999999999999998763 2333 24444 49999999999
Q ss_pred cEEEEEeCCCceeEEEEecCCCC----------------CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682 314 LIFTTGFSKMSERQYSLRAPDHL----------------DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE 377 (490)
Q Consensus 314 ~~l~~~~~~~~~~~i~iwd~~~~----------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd 377 (490)
.+|++++ .++.|++||++.. ..........|...+.+++|+|++++| ++++.|+.|++||
T Consensus 155 ~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d 230 (372)
T 1k8k_C 155 VLLAAGS---CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV-AWVSHDSTVCLAD 230 (372)
T ss_dssp SEEEEEE---TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE-EEEETTTEEEEEE
T ss_pred CEEEEEc---CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEE-EEEeCCCEEEEEE
Confidence 9999998 6899999997521 111122222566789999999999988 7889999999999
Q ss_pred ecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecC
Q psy17682 378 ITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNN 423 (490)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~ 423 (490)
+.+++.. ..+. .+..++.+++|+|++.+++++ ++.+++|++..
T Consensus 231 ~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 231 ADKKMAV-ATLA--SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp GGGTTEE-EEEE--CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCCCcee-EEEc--cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 9998732 2222 344689999999999988887 45889999988
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=7.1e-32 Score=260.12 Aligned_cols=250 Identities=10% Similarity=-0.000 Sum_probs=175.4
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--------CCCCEEEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--------TAQNVLLTA 234 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--------~~~~~l~s~ 234 (490)
.|...+....+.+++ .+|++|+.|++|+|||+++++.... .+...+.+|.+.|.+++|+| ++ ++|++|
T Consensus 87 ~~~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~~--~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~ 162 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETIITQ--HVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASV 162 (393)
T ss_dssp ----------CCEEE-EEEEEEETTSCEEEEEEETTEEEEE--EEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEE
T ss_pred ccCCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCcccee--eeecccCCCCCceEEEEEccccccccCCCC-CEEEEE
Confidence 455555555566655 8999999999999999987754332 22334678999999999998 66 499999
Q ss_pred eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeee----------------
Q psy17682 235 GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAV---------------- 297 (490)
Q Consensus 235 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------- 297 (490)
+.|++|+|||++++.++..+..|...+.+++|+|++ .+|++++.|++|++||+++++......
T Consensus 163 s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 163 GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 999999999999888888888899999999999987 489999999999999999876443221
Q ss_pred ---------ecCCCceeEEEEe-CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----------------ccCCCce
Q psy17682 298 ---------CHEGSKATRAIYL-KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE----------------LDTSNGV 351 (490)
Q Consensus 298 ---------~~~~~~~~~~~~s-~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~----------------~~~~~~i 351 (490)
+|.. .+.++.|+ ++++.+++++ .++.+++||+........+.. .......
T Consensus 243 ~~~~~~~~~~~~~-~v~~v~~~~~dg~~l~s~s---~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 243 PLVNTCHSSGIAS-SLANVRWIGSDGSGILAMC---KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp GGC------CCSS-SCSEEEEETTTTCEEEEEC---TTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred cceeeeecccccc-cceeeeeecCCCCEEEEEe---CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence 2333 36777776 7899999998 789999999986543222111 0111112
Q ss_pred eeeeec-CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc-eeEEEEecC
Q psy17682 352 MFPLYD-PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNN 423 (490)
Q Consensus 352 ~~~~~s-~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~ 423 (490)
....|+ +.++.++++|+.||.|++||+.+++..... ..+..+|++++|+|||++|+++++ .+.+|++..
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~---~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP---IQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE---EECSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe---cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 223333 345555588999999999999998754332 356679999999999999888854 556777654
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-31 Score=251.09 Aligned_cols=279 Identities=10% Similarity=0.003 Sum_probs=206.3
Q ss_pred EEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682 50 VLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE 129 (490)
Q Consensus 50 v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 129 (490)
..+.+++ .+|+||+.||+|++||+.++.... .+. ...+..+.++|.
T Consensus 42 ~~~~~d~-~~l~sg~~Dg~v~iwd~~~~~~~~------------------~~~-------~~~v~~~~~~~~-------- 87 (343)
T 3lrv_A 42 KSMYYDK-WVCMCRCEDGALHFTQLKDSKTIT------------------TIT-------TPNPRTGGEHPA-------- 87 (343)
T ss_dssp SSSSEEE-EEEEEEEETTEEEEEEESSSSCEE------------------EEE-------EECCCTTCCCCS--------
T ss_pred hhhcCCC-CEEEEECCCCcEEEEECCCCcEEE------------------EEe-------cCCceeeeeCCc--------
Confidence 3445566 899999999999999998865211 000 124566677765
Q ss_pred EEeeCCCceEEEECCCCCCCC-cccCCCCccee-ecccCCeeEEEECC--CCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682 130 IRKLKSQQALSILPPPSTAPN-TGRINADHALV-GGHKGPVLDIAWSP--HDDNVIASGSEDCVVKVWQIPDGGISRTLT 205 (490)
Q Consensus 130 ~~~~~~~g~i~v~~~~~~~~~-~~~~~~~~~~~-~~h~~~V~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 205 (490)
+++++.++.+++|+....... .......+..+ .+|.+.|.+++|+| ++ .++++|+.||+|++||+++++......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~ 166 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHS 166 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 677899999999977521000 00011112222 36778999999999 88 899999999999999999887644321
Q ss_pred cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE-EEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy17682 206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM-IQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMR 283 (490)
Q Consensus 206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~ 283 (490)
..|...+.+++|+|++. +|++|+.||.|++||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|+
T Consensus 167 ------~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~ 238 (343)
T 3lrv_A 167 ------AKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVV 238 (343)
T ss_dssp ------CCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEE
T ss_pred ------cCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEE
Confidence 22566799999999995 9999999999999999999877 78887 999999999999999999999 55999
Q ss_pred EEeCCCCceeeeeee---cCCCce--eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682 284 IINPRTGAIEEEAVC---HEGSKA--TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP 358 (490)
Q Consensus 284 iwd~~~~~~~~~~~~---~~~~~~--~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 358 (490)
+||+++++....+.. +.. .+ .+++|+|+|++|++++. .++.+++|++......... ..+..+.|++
T Consensus 239 iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~s~--~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~ 309 (343)
T 3lrv_A 239 CFDLRKDVGTLAYPTYTIPEF-KTGTVTYDIDDSGKNMIAYSN--ESNSLTIYKFDKKTKNWTK------DEESALCLQS 309 (343)
T ss_dssp EEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCSEEE------EEEEECCC--
T ss_pred EEEcCCCCcceeecccccccc-cccceEEEECCCCCEEEEecC--CCCcEEEEEEcccccceEe------cCceeEecCc
Confidence 999999877655543 222 12 36999999999999872 2788999999765543322 4567888888
Q ss_pred ---CCCeEEEEecCCCeEEEEEecCC
Q psy17682 359 ---DTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 359 ---~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
+.+.+ ++++.|+.+.++-....
T Consensus 310 ~~~~~~~l-~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 310 DTADFTDM-DVVCGDGGIAAILKTND 334 (343)
T ss_dssp --CCCCEE-EEEEETTEEEEEEECSS
T ss_pred ccccccee-EEEecCCceEEEEecCC
Confidence 88888 67888999988765443
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.5e-30 Score=251.85 Aligned_cols=291 Identities=10% Similarity=0.096 Sum_probs=224.5
Q ss_pred EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
+..+..| ..+.+++|+|++ .++++++.|+.|++||+.+++.. .
T Consensus 116 ~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~------------------~----------------- 158 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTV------------------R----------------- 158 (433)
T ss_dssp EEEEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEE------------------E-----------------
T ss_pred EEEEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEe------------------e-----------------
Confidence 3334444 456689999944 88888888999999998875410 0
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 196 (490)
.. ....+.+|.+.|.+++|+|++ .++++++.|+.|++||++
T Consensus 159 ------------------------~~--------------~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 159 ------------------------LS--------------PPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp ------------------------EC--------------CCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETT
T ss_pred ------------------------ec--------------CcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECC
Confidence 00 011245789999999999987 899999999999999998
Q ss_pred CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT 276 (490)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 276 (490)
+++....+ ..|...+.+++|+|+++.++++++.|+.|++||+++++.+..+.. ...+.+++|+|+++.++++
T Consensus 200 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 200 TLAYKATV-------DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp TCCEEEEE-------ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEE
T ss_pred CceEEEEE-------cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEE
Confidence 87765543 358889999999999974446666899999999999998888774 4569999999999999988
Q ss_pred e--------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682 277 C--------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDT 347 (490)
Q Consensus 277 ~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~ 347 (490)
+ .|+.|++||+++++....+. +.. .+..++|+|+++.+ ++++ .++.+++||+.+.+. .....+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~g~~l~~~~~---~~~~v~v~d~~~~~~---~~~~~~ 343 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG-NKRHIVSGNTENKIYVSDM---CCSKIEVYDLKEKKV---QKSIPV 343 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE-CEEEEEECSSTTEEEEEET---TTTEEEEEETTTTEE---EEEEEC
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeecc-CCC-CcceEEECCCCCEEEEEec---CCCEEEEEECCCCcE---EEEecC
Confidence 8 48899999999988776654 333 38899999999754 5555 688999999987542 333445
Q ss_pred CCceeeeeecCCCCeEEEEecC--------------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-
Q psy17682 348 SNGVMFPLYDPDTNLVYLCGKG--------------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS- 412 (490)
Q Consensus 348 ~~~i~~~~~s~~~~~l~~~g~~--------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~- 412 (490)
...+..++|+|+|+++++++.. ||.|++||+.+++ .+..+.....+.+++|+|++.+++++
T Consensus 344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT----VKEFWEAGNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE----EEEEEECSSSEEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc----EEEEecCCCCCceEEEcCCCCEEEEEE
Confidence 6779999999999998655443 5799999999876 33344455689999999999887654
Q ss_pred --cceeEEEEecC
Q psy17682 413 --CEIGRFFRLNN 423 (490)
Q Consensus 413 --~~~~~~~~~~~ 423 (490)
++.+++|++..
T Consensus 420 ~~d~~i~v~~~~~ 432 (433)
T 3bws_A 420 FLDHQIRVYRRDG 432 (433)
T ss_dssp TTTTEEEEEEETT
T ss_pred CCCCeEEEEEecC
Confidence 45888998763
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-31 Score=260.44 Aligned_cols=297 Identities=11% Similarity=0.193 Sum_probs=205.7
Q ss_pred cEEeccccc------------ceeeeEEeccCCC-ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682 36 PVVDLLYHQ------------RRVGLVLWHPTAQ-NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG 102 (490)
Q Consensus 36 ~~~~l~gH~------------~~V~~v~~~p~~~-~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (490)
....+.+|. +.|++++|+|+++ .+|++++.|++|++||+..+..... .... ..
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~-----~~~~---------~~ 138 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPE-----GYNL---------KE 138 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEE-----CCSC---------C-
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcc-----eecc---------cC
Confidence 577899998 8899999999975 5899999999999999876431000 0000 00
Q ss_pred CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682 103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA 182 (490)
Q Consensus 103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~ 182 (490)
..+.......+..+.+..- .. .+ .. ... ........+|...|.+++|+|++ .+|+
T Consensus 139 ~~g~~~~~~~~~~~~~~~~-----~~-------~~-~~-~~~----------~~~~~~~~~h~~~v~~~~~~~~~-~~l~ 193 (447)
T 3dw8_B 139 EDGRYRDPTTVTTLRVPVF-----RP-------MD-LM-VEA----------SPRRIFANAHTYHINSISINSDY-ETYL 193 (447)
T ss_dssp -------CCCCCSCCCCEE-----EE-------EE-EE-EEE----------EEEEEECSCCSSCCCEEEECTTS-SEEE
T ss_pred ccccccCcccccceEeccc-----cc-------hh-ee-eec----------cceEEeccCCCcceEEEEEcCCC-CEEE
Confidence 0000000001111111100 00 00 00 000 00011235899999999999988 8999
Q ss_pred EEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee----EEEEecC
Q psy17682 183 SGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI----MIQIECH 257 (490)
Q Consensus 183 s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~~ 257 (490)
+| .|+.|++||+++ ++....+......+.+|...|.+++|+|++.++|++|+.||.|++||+++++. +..+..|
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 98 799999999984 33322221111135579999999999999845999999999999999999886 7888877
Q ss_pred CC------------cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeeeeecCCCc--------------eeEEEEe
Q psy17682 258 PD------------IVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAIEEEAVCHEGSK--------------ATRAIYL 310 (490)
Q Consensus 258 ~~------------~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~--------------~~~~~~s 310 (490)
.. .|.+++|+|++++|++++. +.|++||+++ ++++..+..|.... +..++|+
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s 351 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWN 351 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEEC
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEEC
Confidence 75 8999999999999999999 9999999997 88888888775310 2248999
Q ss_pred CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-------------------------------eccCCCceeeeeecCC
Q psy17682 311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-------------------------------ELDTSNGVMFPLYDPD 359 (490)
Q Consensus 311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-------------------------------~~~~~~~i~~~~~s~~ 359 (490)
|++.+|++|+ .|+.|++||+.+++.. .+. .......|..++|+|+
T Consensus 352 ~~~~~l~s~s---~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 427 (447)
T 3dw8_B 352 GSDSVVMTGS---YNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPK 427 (447)
T ss_dssp TTSSEEEEEC---STTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSS
T ss_pred CCCCEEEEec---cCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCC
Confidence 9999999998 7899999999876532 111 1123346888999999
Q ss_pred CCeEEEEecCCCeEEEEEec
Q psy17682 360 TNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 360 ~~~l~~~g~~dg~i~iwd~~ 379 (490)
+++| ++++.++ +++|..+
T Consensus 428 ~~~l-a~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 428 ENII-AVATTNN-LYIFQDK 445 (447)
T ss_dssp SSEE-EEECSSC-EEEEECC
T ss_pred CCEE-EEEecce-eeeeccc
Confidence 9998 6676665 7788643
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-30 Score=254.92 Aligned_cols=260 Identities=15% Similarity=0.233 Sum_probs=206.0
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc---cccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT---LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS 236 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 236 (490)
...+|.+.|++++|+|+++.+|++++.||.|++|++.+...... ...+...+.+|...|.+++|+|++..+|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 44689999999999998558999999999999999975211000 013344567799999999999998669999999
Q ss_pred CCcEEEEECCCCee-------EEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeeeeeecCCCcee
Q psy17682 237 DNNVAIWNVGTGEI-------MIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTG---AIEEEAVCHEGSKAT 305 (490)
Q Consensus 237 dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~ 305 (490)
||.|++||+..+.. ...+..|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|... +.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-v~ 281 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE-VN 281 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC-EE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC-eE
Confidence 99999999987321 456678999999999999 6789999999999999999987 566677777765 99
Q ss_pred EEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 306 RAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 306 ~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
+++|+|++. ++++|+ .++.|++||++....+..... .|...|.+++|+|+++.++++++.|+.|++||+......
T Consensus 282 ~i~~~p~~~~~l~tg~---~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 282 CLSFNPYSEFILATGS---ADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEECSSCTTEEEEEE---TTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred EEEeCCCCCCEEEEEe---CCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 999999987 688888 689999999998555444333 467889999999999877689999999999999873210
Q ss_pred ----------eEEeeee-eCCCceeeEEEeeCce-eEEee--cceeEEEEecCC
Q psy17682 385 ----------VHYINTF-QTPDPQRGIGMMPKRG-CDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 385 ----------~~~~~~~-~~~~~i~~~~~sp~~~-~l~~~--~~~~~~~~~~~~ 424 (490)
...+..+ .+...|++++|+|++. +++++ ++.+++|++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 0122222 3456899999999998 66665 457899998764
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=1.4e-30 Score=246.17 Aligned_cols=249 Identities=12% Similarity=0.062 Sum_probs=203.9
Q ss_pred eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCC-EEEEEeCCCc
Q psy17682 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN-VLLTAGSDNN 239 (490)
Q Consensus 161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~ 239 (490)
..+|.+.|.+++|+|++ .+|++++.||.|++|++.+++.... .....+|...|.+++|+|++ . +|++|+.||.
T Consensus 7 ~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 80 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVD----LLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGE 80 (342)
T ss_dssp SSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEE----EEEEEECSSCEEEEEEEESS-SEEEEEEETTSC
T ss_pred ccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcccc----ceeeeecCCceEEEEECCCC-CcEEEEEcCCCe
Confidence 45899999999999988 8999999999999999987762111 12244699999999999997 6 8999999999
Q ss_pred EEEEEC-CCCeeEEEEec--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeeeeeecCCCceeEE
Q psy17682 240 VAIWNV-GTGEIMIQIEC--HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT---------GAIEEEAVCHEGSKATRA 307 (490)
Q Consensus 240 v~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~ 307 (490)
|++||+ .+++. ..+.. |...|.+++|+| ++.|++++.|+.|++||+++ ++++..+. +.. .+.++
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~ 156 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-KIFTM 156 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-CEEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-ceEEE
Confidence 999999 77754 67778 999999999999 99999999999999999987 76666665 544 49999
Q ss_pred EEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCC----
Q psy17682 308 IYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAE---- 381 (490)
Q Consensus 308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~---- 381 (490)
+|+|++ +++++ .++.|++||++. ...........+...+.+++|+| +++++ ++++.||.|++|++...
T Consensus 157 ~~~~~~--l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 157 DTNSSR--LIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSIDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp EECSSE--EEEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEETTSEEEEEECCTTCCST
T ss_pred EecCCc--EEEEe---CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEE-EEEecCCcEEEEEEcCCCccc
Confidence 999988 66666 688999999998 66555556667778899999999 99988 78889999999999876
Q ss_pred -CCeeEEeeeee-------CCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682 382 -PPFVHYINTFQ-------TPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG 425 (490)
Q Consensus 382 -~~~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~ 425 (490)
......+.... +..+|.+++|+|++.++++++ +.+++|++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 12222332221 123899999999999888774 478999998876
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-30 Score=255.43 Aligned_cols=259 Identities=12% Similarity=0.125 Sum_probs=200.1
Q ss_pred Cccee-ecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEECCC---CCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682 157 DHALV-GGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPD---GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231 (490)
Q Consensus 157 ~~~~~-~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 231 (490)
.+..+ .+|.+.|++++|+| ++ .+|++|+.||+|++||+.+ +.... +...+ .|...|.+++|+|++. +|
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~-~h~~~v~~~~~~~~~~-~l 126 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVYS----SSLTY-DCSSTVTQITMIPNFD-AF 126 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCCS----CSEEE-ECSSCEEEEEECTTSS-EE
T ss_pred EEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCcccc----eeeec-cCCCCEEEEEEeCCCC-EE
Confidence 34456 78999999999999 77 8999999999999999876 33211 11112 4899999999999985 99
Q ss_pred EEEeCCCcEEEEECC---CCeeEEEEe----------c--CCCcEEEEE--EcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682 232 LTAGSDNNVAIWNVG---TGEIMIQIE----------C--HPDIVYSAS--WNWDGSKLLTTCKDKKMRIINPRTGAIEE 294 (490)
Q Consensus 232 ~s~~~dg~v~iwd~~---~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 294 (490)
++|+.||.|++||+. +++.+..+. . +...+.++. +++++++|++++.|+.|++||+++++++.
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 999999999999994 454443332 1 456677776 56789999999999999999999999999
Q ss_pred eeee--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee----ecCCCCeEEEEec
Q psy17682 295 EAVC--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL----YDPDTNLVYLCGK 368 (490)
Q Consensus 295 ~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~----~s~~~~~l~~~g~ 368 (490)
.+.. |... +.+++|+|++.+|++|+ .|+.|++||++.... .......+...|.+++ |+|++++| ++|+
T Consensus 207 ~~~~~~h~~~-v~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~s~~~~~l-~s~~ 280 (437)
T 3gre_A 207 IIENSPRHGA-VSSICIDEECCVLILGT---TRGIIDIWDIRFNVL-IRSWSFGDHAPITHVEVCQFYGKNSVIV-VGGS 280 (437)
T ss_dssp EEECCGGGCC-EEEEEECTTSCEEEEEE---TTSCEEEEETTTTEE-EEEEBCTTCEEEEEEEECTTTCTTEEEE-EEES
T ss_pred EEccCCCCCc-eEEEEECCCCCEEEEEc---CCCeEEEEEcCCccE-EEEEecCCCCceEEEEeccccCCCccEE-EEEc
Confidence 9987 6664 99999999999999998 689999999997542 2222335667899994 45567777 8999
Q ss_pred CCCeEEEEEecCCCCeeEEeeee------------------------eCCCceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682 369 GDSVIRYFEITAEPPFVHYINTF------------------------QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLN 422 (490)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~ 422 (490)
.||.|++||+.+++.... +... .+...|++++|+ ++.+++++ ++.+++|++.
T Consensus 281 ~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYA-FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp TTEEEEEEETTTTEEEEE-EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred CCCcEEEEEcCCCcEEEE-EEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence 999999999998763222 2111 134568999999 77777777 4588999998
Q ss_pred CCCceEEE
Q psy17682 423 NSGLCQVV 430 (490)
Q Consensus 423 ~~~~~~~i 430 (490)
+++....+
T Consensus 359 ~~~~~~~~ 366 (437)
T 3gre_A 359 ELSSSKAV 366 (437)
T ss_dssp CGGGCEEE
T ss_pred CcccceEE
Confidence 87744443
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=245.01 Aligned_cols=250 Identities=18% Similarity=0.197 Sum_probs=194.5
Q ss_pred ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682 41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE 120 (490)
Q Consensus 41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 120 (490)
.+|...|.+++|+|++..+|++++.||.|++||+.++.. .
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------------~---------------------- 135 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT------------------A---------------------- 135 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE------------------E----------------------
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc------------------c----------------------
Confidence 469999999999996658999999999999999987430 0
Q ss_pred ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCC--CEEEEEeCCCcEEEEECCCC
Q psy17682 121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDD--NVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~ 198 (490)
.. ..|...+.++.|+|.+. .++++++.||.|++||++++
T Consensus 136 --------------------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 136 --------------------------------------DV-FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp --------------------------------------EE-EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred --------------------------------------ee-ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 01 12556788899988542 49999999999999999888
Q ss_pred CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEE---------------ecCCCcEE
Q psy17682 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQI---------------ECHPDIVY 262 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------------~~~~~~v~ 262 (490)
+.... +.+|...|.+++|+|+++.+|++++.||.|++||+++++ .+..+ ..|...|.
T Consensus 177 ~~~~~-------~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (408)
T 4a11_B 177 SCSHI-------LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN 249 (408)
T ss_dssp CCCEE-------ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred ceeee-------ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence 76554 445999999999999997679999999999999998765 44444 46888999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682 263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD 337 (490)
Q Consensus 263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~ 337 (490)
+++|+|++++|++++.||.|++||+++++.......+. ............+.+++++ .++.|++||+.+..
T Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~v~d~~~~~ 325 (408)
T 4a11_B 250 GLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP----YGSTIAVYTVYSGE 325 (408)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE----ETTEEEEEETTTCC
T ss_pred EEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe----cCCEEEEEECcCCc
Confidence 99999999999999999999999999987655443221 1112222233334555554 48899999999866
Q ss_pred CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
.... ...|...|.+++|+|++++| ++|+.||.|++||+.++++
T Consensus 326 ~~~~--~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 326 QITM--LKGHYKTVDCCVFQSNFQEL-YSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEE--ECCCSSCEEEEEEETTTTEE-EEEETTSCEEEEEECC---
T ss_pred ceee--eccCCCeEEEEEEcCCCCEE-EEECCCCeEEEEeCCCCCc
Confidence 4322 23577889999999999998 7899999999999999874
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=7.2e-29 Score=231.86 Aligned_cols=266 Identities=19% Similarity=0.236 Sum_probs=209.5
Q ss_pred eeeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682 24 RLTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG 102 (490)
Q Consensus 24 ~~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (490)
.+..||..+.. .....+.+|...|++++|+|++ ++|+||+.||+|++||+.+++.. ....+
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~-----------------~~~~~ 107 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRL-----------------RNMTS 107 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE-----------------EEEEC
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeE-----------------EEecC
Confidence 36677765533 2334567899999999999999 89999999999999999886511 11111
Q ss_pred CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682 103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA 182 (490)
Q Consensus 103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~ 182 (490)
+ ...+.++...+. .+++++.++.+.+|... . .......+.+|...+.++.+++++ .+++
T Consensus 108 h------~~~~~~~~~~~~-------~l~s~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 166 (318)
T 4ggc_A 108 H------SARVGSLSWNSY-------ILSSGSRSGHIHHHDVR----V---AEHHVATLSGHSQEVCGLRWAPDG-RHLA 166 (318)
T ss_dssp C------SSCEEEEEEETT-------EEEEEETTSEEEEEETT----S---SSCEEEEEECCSSCEEEEEECTTS-SEEE
T ss_pred c------cceEEEeecCCC-------EEEEEecCCceEeeecC----C---CceeEEEEcCccCceEEEEEcCCC-CEEE
Confidence 1 112233333332 57788999999999875 1 122455678999999999999988 8999
Q ss_pred EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEE--EEeCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682 183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL--TAGSDNNVAIWNVGTGEIMIQIECHPDI 260 (490)
Q Consensus 183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 260 (490)
+++.||+|++||+++++..... ......+...|.++.++|.+..++. +++.++.|++||.+......... +...
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~ 242 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVP---LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQ 242 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCC---SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSC
T ss_pred EEecCcceeEEECCCCcccccc---eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceee
Confidence 9999999999999887654322 2234558889999999998876654 55678999999999888776655 7788
Q ss_pred EEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682 261 VYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL 336 (490)
Q Consensus 261 v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~ 336 (490)
+..+.|+|+++.+++++ .|+.|++||+++++++.++.+|.+. |.+++|+|+|++|++|+ .|+.|++||+...
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-V~~l~~spdg~~l~S~s---~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAA---ADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEE---TTTEEEEECCSCC
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---cCCeEEEEECCCC
Confidence 99999999999887765 7899999999999999999999876 99999999999999998 7999999998764
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-30 Score=271.17 Aligned_cols=254 Identities=16% Similarity=0.156 Sum_probs=203.5
Q ss_pred ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeC
Q psy17682 159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGS 236 (490)
Q Consensus 159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~ 236 (490)
.++.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.. .....+.+|...|++++|+|+ + ++|++|+.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~-----~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~ 75 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSY 75 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCTTSC-SEEEEEET
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-----ccceeccCCcCceEEEEecCCCCC-CEEEEEeC
Confidence 3568999999999999998 7999999999999999874322 223346679999999999988 6 59999999
Q ss_pred CCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEe
Q psy17682 237 DNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYL 310 (490)
Q Consensus 237 dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s 310 (490)
||.|++||+++++ .+..+..|...|.+++|+|+ ++.+++++.||.|++||++++. ....+..|... +.++.|+
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~-v~~l~~~ 154 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWA 154 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC-EEEEEEC
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc-eEEEEec
Confidence 9999999999887 67777889999999999999 9999999999999999999874 33444566654 9999999
Q ss_pred C-------------CCcEEEEEeCCCceeEEEEecCCCCCCCeEE--EeccCCCceeeeeecCC---CCeEEEEecCCCe
Q psy17682 311 K-------------SGLIFTTGFSKMSERQYSLRAPDHLDEPIVM--VELDTSNGVMFPLYDPD---TNLVYLCGKGDSV 372 (490)
Q Consensus 311 ~-------------~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~---~~~l~~~g~~dg~ 372 (490)
| ++.++++|+ .++.|++||+++....... ....|...|.+++|+|+ ++++ ++|+.||.
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs---~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l-~s~s~Dg~ 230 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDRT 230 (753)
T ss_dssp CCC---------CGGGCCEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEESSSC
T ss_pred CcccccccccccCCCCCEEEEEE---CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE-EEEecCCE
Confidence 9 588999998 6899999999876543222 22357788999999999 7777 88999999
Q ss_pred EEEEEecCCCCee--EEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682 373 IRYFEITAEPPFV--HYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 373 i~iwd~~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~ 424 (490)
|++||+.+++... .......+...|++++|+|++.+++++ ++.+++|++...
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 9999999864211 122223355789999999999988877 447889998753
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.2e-29 Score=248.16 Aligned_cols=269 Identities=17% Similarity=0.246 Sum_probs=213.6
Q ss_pred cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK 191 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~ 191 (490)
.+.++++... .+++++.+|.|++|++. . ......+.+|.+.|.+++| ++ .+|++|+.||+|+
T Consensus 135 ~v~~~~~d~~-------~l~~g~~dg~i~iwd~~-----~---~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~ 196 (435)
T 1p22_A 135 GVYCLQYDDQ-------KIVSGLRDNTIKIWDKN-----T---LECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVR 196 (435)
T ss_dssp CEEEEECCSS-------EEEEEESSSCEEEEESS-----S---CCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEE
T ss_pred cEEEEEECCC-------EEEEEeCCCeEEEEeCC-----C---CeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEE
Confidence 4566666433 67889999999999985 2 2345678899999999999 45 7999999999999
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE---EEEecCCCcEEEEEEcC
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM---IQIECHPDIVYSASWNW 268 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~ 268 (490)
+||+.+++.+.. +.+|...|.+++|++ ..+++|+.||.|++||+++++.+ ..+.+|...|.+++|
T Consensus 197 vwd~~~~~~~~~-------~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-- 264 (435)
T 1p22_A 197 VWDVNTGEMLNT-------LIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 264 (435)
T ss_dssp EEESSSCCEEEE-------ECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--
T ss_pred EEECCCCcEEEE-------EcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--
Confidence 999998876554 446999999999974 38999999999999999987755 567789999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682 269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS 348 (490)
Q Consensus 269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~ 348 (490)
+++++++++.||.|++||+++++.+..+..|... +.++.+ ++.++++|+ .|+.|++||++++..... ...|.
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~~~~--~~~~l~~g~---~dg~i~iwd~~~~~~~~~--~~~h~ 336 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRV--LEGHE 336 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCCEEEE--ECCCS
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc-EEEEEe--CCCEEEEEe---CCCeEEEEECCCCCEEEE--EeCCc
Confidence 6889999999999999999999999999988775 888888 467888888 689999999998654322 23566
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC--------eeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEE
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP--------FVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRF 418 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~ 418 (490)
..|.+++| ++++| ++|+.||.|++||+.+++. ....+ ..+..+|.+++| ++.+++++ ++.+++
T Consensus 337 ~~v~~~~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~--~~~~l~s~s~Dg~i~i 409 (435)
T 1p22_A 337 ELVRCIRF--DNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL--VEHSGRVFRLQF--DEFQIVSSSHDDTILI 409 (435)
T ss_dssp SCEEEEEC--CSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE--CCCSSCCCCEEE--CSSCEEECCSSSEEEE
T ss_pred CcEEEEEe--cCCEE-EEEeCCCcEEEEECCCCCCccccccchheeec--cCCCCCeEEEEe--CCCEEEEEeCCCEEEE
Confidence 78999988 67777 8899999999999986541 12222 245578999999 56666666 458899
Q ss_pred EEecCCC
Q psy17682 419 FRLNNSG 425 (490)
Q Consensus 419 ~~~~~~~ 425 (490)
|++.+..
T Consensus 410 wd~~~~~ 416 (435)
T 1p22_A 410 WDFLNDP 416 (435)
T ss_dssp EC-----
T ss_pred EECCCCC
Confidence 9998765
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-30 Score=248.44 Aligned_cols=260 Identities=8% Similarity=0.029 Sum_probs=198.9
Q ss_pred ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682 111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV 190 (490)
Q Consensus 111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i 190 (490)
..+.+++||||+ ..+++++.|++++ +. ..+ ..+.+|...|.+++|+|+| .++.+
T Consensus 16 ~~v~sv~~SpDG-----~~iASas~D~TV~--d~-----~~~------~~l~gh~~~v~~V~FsPdg--------~~~~~ 69 (588)
T 2j04_A 16 DWKNNLTWARDG-----TLYLTTFPDISIG--QP-----KYA------KDINCNSKNLFHVKEFPLE--------FENKL 69 (588)
T ss_dssp SSSCCEEECTTS-----CEEEECSSSEEEE--EE-----CCC------SCCSSBGGGTEEEEEECCC--------CCCTT
T ss_pred ccEEEEEECCCC-----CEEEEEcCCceee--cc-----ccc------ceecCCCccEEEEEECCCC--------CcceE
Confidence 468999999996 5788999999999 32 222 2336999999999999987 46666
Q ss_pred EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC-----cEEEEE
Q psy17682 191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD-----IVYSAS 265 (490)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~ 265 (490)
.+|+.+.. ..+. + .|...|.+++|+|+|. +|++++.||.|++||... .+..+. |.. .+.+++
T Consensus 70 ~~~~~~~~---~~~~-----~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 70 DFELAQQN---GLLN-----S-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp TTSCCCSS---CSST-----T-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEE
T ss_pred EEEeCCCc---eEee-----c-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEE
Confidence 56554322 2221 1 2678999999999996 899999999999999543 666666 665 499999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce-------eeee----eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682 266 WNWDGSKLLTTCKDKKMRIINPRTGAI-------EEEA----VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~----~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~ 334 (490)
|||+|++|++|+.||+|++||+.++.. +.++ .+|.. .+.+++|+|+| +++++ .|+.+++||+.
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~-~V~sVawSPdg--Laass---~D~tVrlWd~~ 210 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKD-WVTHIVWYEDV--LVAAL---SNNSVFSMTVS 210 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC-CEEEEEEETTE--EEEEE---TTCCEEEECCC
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccc-cEEEEEEcCCc--EEEEe---CCCeEEEEECC
Confidence 999999999999999999999998753 5665 34444 49999999999 55555 59999999998
Q ss_pred CCCCCe--EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE--eeCceeEE
Q psy17682 335 HLDEPI--VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM--MPKRGCDV 410 (490)
Q Consensus 335 ~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~--sp~~~~l~ 410 (490)
...... ......|...|.+++|+ |+.| ++++ ++.|++||+.+++. ....+.+...+.+++| +|++..++
T Consensus 211 ~~~~~~~~~tL~~~h~~~V~svaFs--g~~L-ASa~-~~tIkLWd~~~~~~---~~~~~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 211 ASSHQPVSRMIQNASRRKITDLKIV--DYKV-VLTC-PGYVHKIDLKNYSI---SSLKTGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp SSSSCCCEEEEECCCSSCCCCEEEE--TTEE-EEEC-SSEEEEEETTTTEE---EEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred CCccccceeeecccccCcEEEEEEE--CCEE-EEEe-CCeEEEEECCCCeE---EEEEcCCCceEEEEEeeeCCCCCEEE
Confidence 766321 11212466789999999 6777 5665 69999999998762 1222357788999999 99998888
Q ss_pred eeccee-EEEEec
Q psy17682 411 NSCEIG-RFFRLN 422 (490)
Q Consensus 411 ~~~~~~-~~~~~~ 422 (490)
++++.. ++|...
T Consensus 284 ~a~edG~klw~~d 296 (588)
T 2j04_A 284 MSNKTSYKVLLED 296 (588)
T ss_dssp ECSSCEEEEEESS
T ss_pred EEcCCCCEEEeec
Confidence 886533 588876
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=9.4e-29 Score=238.34 Aligned_cols=274 Identities=12% Similarity=0.098 Sum_probs=211.3
Q ss_pred ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682 58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ 137 (490)
Q Consensus 58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g 137 (490)
.++++++.|+.|++||+.+++. ...+.. ...+.+++|+|+.. .+++++..++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~------------------~~~~~~------~~~~~~~~~s~dg~----~l~~~~~~d~ 54 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV------------------TATIPV------GSNPMGAVISPDGT----KVYVANAHSN 54 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE------------------EEEEEC------SSSEEEEEECTTSS----EEEEEEGGGT
T ss_pred EEEEEcCCCCEEEEEECCCCeE------------------EEEeec------CCCcceEEECCCCC----EEEEECCCCC
Confidence 6789999999999999987641 111111 11367899999862 2345677899
Q ss_pred eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccC
Q psy17682 138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRR 217 (490)
Q Consensus 138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 217 (490)
.|++|++. .++ ....+..|. .+.+++|+|++..++++++.|+.|++||+.+++....+. +...
T Consensus 55 ~i~v~d~~-----~~~---~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~ 117 (391)
T 1l0q_A 55 DVSIIDTA-----TNN---VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--------TGKS 117 (391)
T ss_dssp EEEEEETT-----TTE---EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSS
T ss_pred eEEEEECC-----CCe---EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--------CCCC
Confidence 99999985 222 233444444 999999999984344566678999999999887655432 4557
Q ss_pred EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeee
Q psy17682 218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL-LTTCKDKKMRIINPRTGAIEEEA 296 (490)
Q Consensus 218 v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~ 296 (490)
+.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++....+
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 196 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV 196 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 8999999999745578888999999999999988888754 567999999999877 56778899999999999887776
Q ss_pred eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682 297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF 376 (490)
Q Consensus 297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw 376 (490)
..+. .+..++|+|+|+++++++.+..++.|++||+.+.+. ...+.....+..++|+|++++++++++.|+.|++|
T Consensus 197 ~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 197 KVEA--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI---TARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp ECSS--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE---EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCC--CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE---EEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 5433 488999999999888886433478999999987643 22333345688999999999998888999999999
Q ss_pred EecCCC
Q psy17682 377 EITAEP 382 (490)
Q Consensus 377 d~~~~~ 382 (490)
|+.+++
T Consensus 272 d~~~~~ 277 (391)
T 1l0q_A 272 DTATNT 277 (391)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 999876
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.3e-31 Score=253.51 Aligned_cols=206 Identities=17% Similarity=0.138 Sum_probs=149.2
Q ss_pred eeecccCCeeEEEECC--------CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682 160 LVGGHKGPVLDIAWSP--------HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p--------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 231 (490)
.+.||.+.|++++|+| ++ ++|++|+.|++|+|||+.++..... +..|...|.+++|+|++.++|
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~-------~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILA-------GYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEE-------EEECSSCEEEEEEETTEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeee-------ecCCCCCcEEEEECCCCCceE
Confidence 4569999999999987 56 8999999999999999977654433 445889999999999986689
Q ss_pred EEEeCCCcEEEEECCCCeeEEEE-------------------------ecCCCcEEEEEEc-CCCCEEEEEeCCCeEEEE
Q psy17682 232 LTAGSDNNVAIWNVGTGEIMIQI-------------------------ECHPDIVYSASWN-WDGSKLLTTCKDKKMRII 285 (490)
Q Consensus 232 ~s~~~dg~v~iwd~~~~~~~~~~-------------------------~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iw 285 (490)
++|+.|++|++||+++++..... .+|...+.++.|+ |+++.|++++.|+++++|
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vw 282 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRW 282 (393)
T ss_dssp EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEE
T ss_pred EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEE
Confidence 99999999999999877543221 3567778899987 799999999999999999
Q ss_pred eCCCCceeeeeeecCCC-----------------ceeEEEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 286 NPRTGAIEEEAVCHEGS-----------------KATRAIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 286 d~~~~~~~~~~~~~~~~-----------------~~~~~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
|+..++....+..+... ......++| ++.++++|+ .|+.|++||..++....... .
T Consensus 283 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs---~Dg~V~lwd~~~~~~~~~~~--~ 357 (393)
T 4gq1_A 283 NLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS---QHGLIQLINTYEKDSNSIPI--Q 357 (393)
T ss_dssp EC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET---TTTEEEEEETTCTTCCEEEE--E
T ss_pred ECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC---CCCEEEEEECCCCcEEEEec--C
Confidence 99887655544433221 012223333 345666776 68999999999877654433 5
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
+...|.+++|+|||++| |+++.+| +.+|.+..
T Consensus 358 ~~~~V~svafspdG~~L-A~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 358 LGMPIVDFCWHQDGSHL-AIATEGS-VLLTRLMG 389 (393)
T ss_dssp CSSCEEEEEECTTSSEE-EEEESSE-EEEEEEGG
T ss_pred CCCcEEEEEEcCCCCEE-EEEeCCC-eEEEEEeC
Confidence 66789999999999999 7777655 67777653
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.8e-28 Score=236.42 Aligned_cols=271 Identities=11% Similarity=0.105 Sum_probs=211.9
Q ss_pred EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682 129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV 208 (490)
Q Consensus 129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 208 (490)
++++++.++.|++|++. .++ ....+.+|. .+.+++|+|++..++++++.|+.|++||+.+++....+.
T Consensus 4 l~vs~~~d~~v~v~d~~-----~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--- 71 (391)
T 1l0q_A 4 AYIANSESDNISVIDVT-----SNK---VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--- 71 (391)
T ss_dssp EEEEETTTTEEEEEETT-----TTE---EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---
T ss_pred EEEEcCCCCEEEEEECC-----CCe---EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---
Confidence 56778899999999985 222 344556664 589999999984445788899999999998887665443
Q ss_pred eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeC
Q psy17682 209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL-LTTCKDKKMRIINP 287 (490)
Q Consensus 209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~ 287 (490)
+...+.+++|+|+++.++++++.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++.++.|++||+
T Consensus 72 -----~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 72 -----AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp -----CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred -----CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 3348999999999974445666779999999999998888874 4578999999999977 67778999999999
Q ss_pred CCCceeeeeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682 288 RTGAIEEEAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
++++.+..+..+.. +..++|+|+++.+ +++. .++.|++||+++... .....+...+..++|+|++++++++
T Consensus 146 ~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~~---~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 146 VTKAVINTVSVGRS--PKGIAVTPDGTKVYVANF---DSMSISVIDTVTNSV---IDTVKVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp TTTEEEEEEECCSS--EEEEEECTTSSEEEEEET---TTTEEEEEETTTTEE---EEEEECSSEEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEecCCC--cceEEECCCCCEEEEEeC---CCCEEEEEECCCCeE---EEEEecCCCccceEECCCCCEEEEE
Confidence 99998887776543 7999999999877 4555 578999999987642 3333455678999999999999665
Q ss_pred ec--CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeE-Eee--cceeEEEEecCCCceEE
Q psy17682 367 GK--GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCD-VNS--CEIGRFFRLNNSGLCQV 429 (490)
Q Consensus 367 g~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~--~~~~~~~~~~~~~~~~~ 429 (490)
+. .++.|++||+.+++ .+..+..+..+.+++|+|++..+ +++ ++.+++|++.+++.+..
T Consensus 218 ~~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTNK----ITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EECSSCCEEEEEETTTTE----EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ecCcCCCcEEEEECCCCe----EEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 54 78999999999876 33344445568999999999766 443 45889999988764433
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.9e-29 Score=236.60 Aligned_cols=270 Identities=7% Similarity=-0.090 Sum_probs=195.3
Q ss_pred EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682 127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE 206 (490)
Q Consensus 127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 206 (490)
...+++++.+|.|++|++. .++ ....+. ...|.++.|+|. +++++.|++|++|+......+..+..
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~-----~~~---~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLK-----DSK---TITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp EEEEEEEEETTEEEEEEES-----SSS---CEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred CCEEEEECCCCcEEEEECC-----CCc---EEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCC
Confidence 3578899999999999985 222 223333 577889999985 99999999999998763211111100
Q ss_pred c--e-eeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682 207 P--V-VDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDK 280 (490)
Q Consensus 207 ~--~-~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg 280 (490)
. . ....+|...|.+++|+| ++. ++++++.||.|++||+++++.+.... .+...+.+++|+|++.+|++|+.||
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 0 1 11224678899999999 885 99999999999999999998876664 4556799999999999999999999
Q ss_pred eEEEEeCCCCcee-eeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCce--eeee
Q psy17682 281 KMRIINPRTGAIE-EEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGV--MFPL 355 (490)
Q Consensus 281 ~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i--~~~~ 355 (490)
.|++||+++++.. ..+.. |.+. +.+++|+|+|.+|++++ ++.|++||+++......+.... +...+ .+++
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~fs~~g~~l~s~~----~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAK-IKEVKFADNGYWMVVEC----DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSC-EEEEEECTTSSEEEEEE----SSBEEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred EEEEEECCCCCCCccEEeccCCCC-EEEEEEeCCCCEEEEEe----CCeEEEEEcCCCCcceeecccccccccccceEEE
Confidence 9999999999887 77776 7764 99999999999999997 3499999999876543322111 11223 4699
Q ss_pred ecCCCCeEEEEecC-CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee---CceeEEee--cceeEEEEecCC
Q psy17682 356 YDPDTNLVYLCGKG-DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP---KRGCDVNS--CEIGRFFRLNNS 424 (490)
Q Consensus 356 ~s~~~~~l~~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp---~~~~l~~~--~~~~~~~~~~~~ 424 (490)
|+|+|++| ++++. |+.|++|++......... .++..++|+| +...++++ ++.++++.....
T Consensus 268 ~~~~g~~l-~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 268 IDDSGKNM-IAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp ECTTSSEE-EEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred ECCCCCEE-EEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 99999999 56655 999999999776532222 3567778887 66555544 334444444433
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-28 Score=239.77 Aligned_cols=256 Identities=11% Similarity=0.005 Sum_probs=200.3
Q ss_pred ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCC--CCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLK--DGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
...+|.+.|++++|+|++..++++|+.||+|++||+. ++..
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~------------------------------------- 139 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV------------------------------------- 139 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-------------------------------------
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-------------------------------------
Confidence 4457888999999999994445999999999999987 4320
Q ss_pred EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee--ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV--GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
...+ ..|...|.+++|+|++ .+|++|+.||.|++|+
T Consensus 140 -----------------------------------------~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 140 -----------------------------------------LKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSID 177 (450)
T ss_dssp -----------------------------------------EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred -----------------------------------------eeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEe
Confidence 0011 2567899999999988 8999999999999999
Q ss_pred CCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCCCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC
Q psy17682 195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSDNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG 270 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~ 270 (490)
+.+++.... +...+.+|...|++++|+|+ +. +|++|+.|+.|++||+++++.+.. +.+|...|.+++|+ ++
T Consensus 178 ~~~~~~~~~---~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 178 INSIPEEKF---TQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp TTSCCCSSC---CCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred cCCcccccc---cceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC
Confidence 988765430 11235569999999999999 74 999999999999999999988877 55899999999999 99
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeeec------------------------CCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCH------------------------EGSKATRAIYLKSGLIFTTGFSKMSER 326 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~~~l~~~~~~~~~~ 326 (490)
++|++++.|++|++||+++++++..+..+ ....+..++|+|+++++++++. .++
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--~d~ 330 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE--ATK 330 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET--TCS
T ss_pred CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC--CCC
Confidence 99999999999999999999988877632 1234889999999999988873 478
Q ss_pred EEEEecC--CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC------CCeEEEEEecCC
Q psy17682 327 QYSLRAP--DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG------DSVIRYFEITAE 381 (490)
Q Consensus 327 ~i~iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~------dg~i~iwd~~~~ 381 (490)
.|++|++ ...........+.....+.+++|+|++ .++++++. +..|.+|.+...
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred eEEEEEeccCCCCceeeccEeccCCceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence 9999999 443322333333344789999999954 44344443 556899988754
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.7e-28 Score=233.94 Aligned_cols=254 Identities=17% Similarity=0.179 Sum_probs=197.9
Q ss_pred CCCcceeecccCCeeEEEECCCC--CCEEEEEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682 155 NADHALVGGHKGPVLDIAWSPHD--DNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231 (490)
Q Consensus 155 ~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 231 (490)
...+..+.+|.+.|++++|+|++ +.+|++|+.||.|++||+.+ +... ...+.+|...|.+++|+|+++ +|
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~-~l 101 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI------PKAQQMHTGPVLDVCWSDDGS-KV 101 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE------EEEEEECSSCEEEEEECTTSS-EE
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee------EEEeccccCCEEEEEECcCCC-EE
Confidence 34566788999999999999984 48999999999999999987 3322 123566999999999999985 99
Q ss_pred EEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682 232 LTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW--NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY 309 (490)
Q Consensus 232 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 309 (490)
++++.||.|++||+++++.+. +..|...|.+++| +|++++|++++.||.|++||+++++.+..+..+.. +.++.+
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~ 178 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER--CYCADV 178 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC--EEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC--ceEEEe
Confidence 999999999999999988776 4559999999999 89999999999999999999999998888876653 666666
Q ss_pred eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCe----EEEEecCCCeEEEEEecCCCCee
Q psy17682 310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL----VYLCGKGDSVIRYFEITAEPPFV 385 (490)
Q Consensus 310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~~g~~dg~i~iwd~~~~~~~~ 385 (490)
.++ .+++++ .++.+.+|+++................+..+.+.++... + ++++.||.|++|++......
T Consensus 179 ~~~--~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dg~i~i~~~~~~~~~- 251 (368)
T 3mmy_A 179 IYP--MAVVAT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF-ALGSIEGRVAIHYINPPNPA- 251 (368)
T ss_dssp ETT--EEEEEE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE-EEEETTSEEEEEESSCSCHH-
T ss_pred cCC--eeEEEe---CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE-EEecCCCcEEEEecCCCCcc-
Confidence 644 555555 588999999987654433333333445566666555443 5 78999999999999987421
Q ss_pred EEeeeeeCC-------------CceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 386 HYINTFQTP-------------DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 386 ~~~~~~~~~-------------~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
..+..+..+ .+|++++|+|++.+++++ ++.+++|++.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence 011122221 169999999999888887 4578999998876
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.1e-27 Score=227.64 Aligned_cols=279 Identities=8% Similarity=0.002 Sum_probs=201.4
Q ss_pred ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682 109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC 188 (490)
Q Consensus 109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg 188 (490)
+...|.+++|+|++ ..++++..+ .+++|+.. ..+ .....+...+..+++.++++.++++++.|+
T Consensus 18 h~~~V~~v~fs~dg-----~~la~g~~~-~~~iw~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQ-----SCLILSTLK-SFEIYNVH-----PVA-----HIMSQEMRHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp -CCCCCEEEECTTS-----SEEEEECSS-EEEEEEET-----TEE-----EEEEEECSCCCEEEECTTSSEEEEECSSTT
T ss_pred CCCceEEEEECCCC-----CEEEEEcCC-EEEEEecC-----Ccc-----eeeeeecCCeEEEEEcCCCCEEEEEECCcc
Confidence 34579999999996 245555555 57899874 111 122233346888899988744446788899
Q ss_pred cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEc
Q psy17682 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWN 267 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~ 267 (490)
+|++||+.+++.+..+. +...|.++.|+++. ++++ .|+.|++||+.++ +.+..+.. ....++++
T Consensus 82 ~v~iWd~~~~~~~~~~~--------~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s 146 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK--------VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFS 146 (355)
T ss_dssp EEEEEETTTTEEEEEEE--------CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEE
T ss_pred EEEEEECCCCcEEEEEE--------CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEE
Confidence 99999999887765443 66789999998763 4444 4789999999988 66666554 44556677
Q ss_pred CCCCEEEE--EeCCCeEEEEeCCCCc----------------eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE-E
Q psy17682 268 WDGSKLLT--TCKDKKMRIINPRTGA----------------IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ-Y 328 (490)
Q Consensus 268 ~~~~~l~~--~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~-i 328 (490)
+ .++++ |+.||.|++||+++++ .+..+.+|... +.+++|+|+|++|++|+ .|++ |
T Consensus 147 ~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-v~~~~~s~~g~~l~s~s---~d~~~v 220 (355)
T 3vu4_A 147 N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-IKMVRLNRKSDMVATCS---QDGTII 220 (355)
T ss_dssp T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC-EEEEEECTTSSEEEEEE---TTCSEE
T ss_pred c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc-eEEEEECCCCCEEEEEe---CCCCEE
Confidence 6 56666 5789999999999865 26777788875 99999999999999999 6887 9
Q ss_pred EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee-EEeee-----------------
Q psy17682 329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV-HYINT----------------- 390 (490)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~-~~~~~----------------- 390 (490)
++||+++++....+....|...|.+++|+|++++| ++++.|+.|++||+..+.... ..+..
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 99999987654333322277889999999999998 789999999999998653110 01000
Q ss_pred ee--CCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682 391 FQ--TPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG 425 (490)
Q Consensus 391 ~~--~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~ 425 (490)
+. ...+...++|+|++..+++++ +.+++|++..+.
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 00 112347799999999888874 466788876644
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.3e-27 Score=230.74 Aligned_cols=252 Identities=10% Similarity=0.025 Sum_probs=201.2
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN 239 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 239 (490)
.+..+ ..+.+++|+|++ .++++++.|+.|++||+.+++...... ...+.+|...|.+++|+|++. ++++++.|+.
T Consensus 118 ~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~ 192 (433)
T 3bws_A 118 RFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSP--PEKYKKKLGFVETISIPEHNE-LWVSQMQANA 192 (433)
T ss_dssp EEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECC--CHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTE
T ss_pred EEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecC--cccccccCCceeEEEEcCCCE-EEEEECCCCE
Confidence 34444 456699999944 788888889999999999887765322 112456888999999999984 9999999999
Q ss_pred EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682 240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 318 (490)
|++||+++++.+..+..|...+.+++|+|+++.+++++ .|+.|++||+++++.+..+..+. .+..++|+|+|+.+++
T Consensus 193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG--LPRGLLLSKDGKELYI 270 (433)
T ss_dssp EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS--EEEEEEECTTSSEEEE
T ss_pred EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC--CceEEEEcCCCCEEEE
Confidence 99999999999999988999999999999999885554 79999999999998877776543 3899999999988887
Q ss_pred EeCCC-----ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682 319 GFSKM-----SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT 393 (490)
Q Consensus 319 ~~~~~-----~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~ 393 (490)
++... .++.|++||+.+++. .....+...+..++|+|+++.++++++.|+.|++||+.+++ .+..+..
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~----~~~~~~~ 343 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKL---IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK----VQKSIPV 343 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEE---EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE----EEEEEEC
T ss_pred EECCCCccccCCCeEEEEECCCCcE---EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc----EEEEecC
Confidence 76211 278999999987642 22233345788999999999888888999999999999876 3344456
Q ss_pred CCceeeEEEeeCceeEEeecc-----------------eeEEEEecCCC
Q psy17682 394 PDPQRGIGMMPKRGCDVNSCE-----------------IGRFFRLNNSG 425 (490)
Q Consensus 394 ~~~i~~~~~sp~~~~l~~~~~-----------------~~~~~~~~~~~ 425 (490)
...+.+++|+|++.++++++. .+++|++.+++
T Consensus 344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 678999999999987766643 67888887765
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=2.6e-27 Score=229.55 Aligned_cols=314 Identities=11% Similarity=0.125 Sum_probs=218.8
Q ss_pred ccceeeeEEeccCCCceEEeee----CCC----eEEEEeC--CCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682 43 HQRRVGLVLWHPTAQNVLLTAG----KEA----EPILISL--KDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST 112 (490)
Q Consensus 43 H~~~V~~v~~~p~~~~~l~s~~----~D~----~v~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (490)
+...|+...|.+.+..++++|+ .|| +++|||+ .+++.... ..+.. ....
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~----------------~~~~~-----~~~~ 119 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ----------------NSYKV-----NKQW 119 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE----------------EEEEE-----CGGG
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee----------------eEEEc-----ChhH
Confidence 4578999999999988888886 467 9999999 77651100 00000 0001
Q ss_pred CCeeEeccc------------cccceEEEEEeeCCC---ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC
Q psy17682 113 ANEITISED------------YVKEFKEEIRKLKSQ---QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD 177 (490)
Q Consensus 113 v~~~~~s~~------------~~~~~~~~~~~~~~~---g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~ 177 (490)
+..+++++. ........+.....+ +.|.+|++.. ...+.+.+|...|.+++|+|+|
T Consensus 120 ~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g---------~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 120 LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG---------YNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS---------CSCEEEEEESSCEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC---------CCCEEEeCCCCcceeeEEcCCC
Confidence 111222110 001112222222223 7999999851 2345678899999999999998
Q ss_pred CCEEEEEeCCC---cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc--EEEEECCCCeeEE
Q psy17682 178 DNVIASGSEDC---VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN--VAIWNVGTGEIMI 252 (490)
Q Consensus 178 ~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~--v~iwd~~~~~~~~ 252 (490)
++|++++.|+ .|++||+.+++... +..|...+.+++|+|+|+.++++++.++. |++||+.+++. .
T Consensus 191 -~~la~~s~~~~~~~i~~~d~~tg~~~~--------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~ 260 (415)
T 2hqs_A 191 -SKLAYVTFESGRSALVIQTLANGAVRQ--------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-R 260 (415)
T ss_dssp -SEEEEEECTTSSCEEEEEETTTCCEEE--------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E
T ss_pred -CEEEEEEecCCCcEEEEEECCCCcEEE--------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-E
Confidence 7899988875 99999999876532 33477889999999999634447766655 99999988775 5
Q ss_pred EEecCCCcEEEEEEcCCCCEEEEEeC-CC--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682 253 QIECHPDIVYSASWNWDGSKLLTTCK-DK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS 329 (490)
Q Consensus 253 ~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~ 329 (490)
.+..|...+.+++|+|+|+.|++++. ++ .|++||+.+++.. .+..+.. .+..++|+|+|++|++++.+..+..|+
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIA 338 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCC-cccCeEECCCCCEEEEEECcCCceEEE
Confidence 66678889999999999999998886 44 6888899887643 3333433 488899999999998887433357999
Q ss_pred EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC---eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682 330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS---VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR 406 (490)
Q Consensus 330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~ 406 (490)
+||+.++.. ..+.....+..++|+|+|++|++ ++.++ .|++||+..+. ...+ ..+...|.+++|+|..
T Consensus 339 ~~d~~~~~~----~~l~~~~~~~~~~~spdg~~l~~-~s~~~~~~~l~~~d~~g~~--~~~l--~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 339 KQDLATGGV----QVLSSTFLDETPSLAPNGTMVIY-SSSQGMGSVLNLVSTDGRF--KARL--PATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEETTTCCE----EECCCSSSCEEEEECTTSSEEEE-EEEETTEEEEEEEETTSCC--EEEC--CCSSSEEEEEEECCCC
T ss_pred EEECCCCCE----EEecCCCCcCCeEEcCCCCEEEE-EEcCCCccEEEEEECCCCc--EEEe--eCCCCCCcCCcccccc
Confidence 999997653 12222237899999999999854 44444 79999987553 2223 2345689999999975
Q ss_pred e
Q psy17682 407 G 407 (490)
Q Consensus 407 ~ 407 (490)
.
T Consensus 410 ~ 410 (415)
T 2hqs_A 410 H 410 (415)
T ss_dssp C
T ss_pred c
Confidence 4
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1e-27 Score=218.08 Aligned_cols=182 Identities=7% Similarity=-0.029 Sum_probs=142.9
Q ss_pred CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC---CCCCEEEEEeCCCcEEEEECCCCCcccccccceee
Q psy17682 134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP---HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210 (490)
Q Consensus 134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 210 (490)
+.++.|++|.+. ..++ ....+.+|...+..++|+| ++ .+|++|+.|++|+|||++++++++.+...
T Consensus 154 g~d~~V~~~~~s----~dG~---~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--- 222 (356)
T 2w18_A 154 LSDQQVEVMTFA----EDGG---GKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHID--- 222 (356)
T ss_dssp STTCEEEEEEEC----TTSC---EEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECC---
T ss_pred CCCCcEEEEEEC----CCCc---eeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCC---
Confidence 368899999885 3333 3445678999999999998 55 89999999999999999999987775320
Q ss_pred ecccccCEEEEEEeeCCCCEE------------EEEeCCCcEEEEECCCCeeEEEE-----ecCCCcEEEEEEcCCCCEE
Q psy17682 211 LLYHQRRVGLVLWHPTAQNVL------------LTAGSDNNVAIWNVGTGEIMIQI-----ECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 211 ~~~~~~~v~~~~~~p~~~~~l------------~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l 273 (490)
..+...+.+++|+|++. ++ ++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++
T Consensus 223 -~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~l 298 (356)
T 2w18_A 223 -DSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCA 298 (356)
T ss_dssp -C---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEE
T ss_pred -CcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEE
Confidence 01234678889999985 54 67889999999999999987765 3566665555554 8899
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP 333 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~ 333 (490)
++++.|++|+|||+.+++++.++.+|....+..++|+|+|++|++|+ .|++|+|||+
T Consensus 299 ASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS---~D~TIklWd~ 355 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ---KDGNIFVYHY 355 (356)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC---TTSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE---CCCcEEEecC
Confidence 99999999999999999999999988876566799999999999998 7999999985
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=7.2e-27 Score=212.51 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=146.3
Q ss_pred ecccCCeeEEEECCCCCCEEEEEe--CCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEee---CCCCEEEEEe
Q psy17682 162 GGHKGPVLDIAWSPHDDNVIASGS--EDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHP---TAQNVLLTAG 235 (490)
Q Consensus 162 ~~h~~~V~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~~ 235 (490)
.+|...|+++ +++ +++.+++ .|+.|++|++.. ++.+.. +.+|...++.++|+| +++ +|++++
T Consensus 133 ~g~~~~v~~l---~~g-~lv~ss~~g~d~~V~~~~~s~dG~~~~s-------~~~~~~~v~~l~fs~~~g~~~-~LaSgS 200 (356)
T 2w18_A 133 SGNIKAVLGL---TKR-RLVSSSGTLSDQQVEVMTFAEDGGGKEN-------QFLMPPEETILTFAEVQGMQE-ALLGTT 200 (356)
T ss_dssp EEEEEEEEEE---TTT-EEEEEESSSTTCEEEEEEECTTSCEEEE-------EEECCCSSCEEEEEEEETSTT-EEEEEE
T ss_pred CCCeEEEEec---CCC-cEEEecccCCCCcEEEEEECCCCceeee-------eccCCCceeeEEeeccCCCCc-eEEEec
Confidence 4566666665 444 5555543 599999999944 554443 446888899999998 554 999999
Q ss_pred CCCcEEEEECCCCeeEEEEecCC---CcEEEEEEcCCCCEE------------EEEeCCCeEEEEeCCCCceeeeee---
Q psy17682 236 SDNNVAIWNVGTGEIMIQIECHP---DIVYSASWNWDGSKL------------LTTCKDKKMRIINPRTGAIEEEAV--- 297 (490)
Q Consensus 236 ~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~--- 297 (490)
.|++|+|||+++++.+.++.+|. ..+.+++|+|+|+++ ++|+.|++|++||..+++.+..+.
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 99999999999999999998654 357788999999876 567889999999999998876652
Q ss_pred --ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee-eeeecCCCCeEEEEecCCCeEE
Q psy17682 298 --CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM-FPLYDPDTNLVYLCGKGDSVIR 374 (490)
Q Consensus 298 --~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~g~~dg~i~ 374 (490)
+|... +....+ ++.++++|+ .|++|+|||+.+++....+. +|...+. .++|+|||++| ++|+.|++|+
T Consensus 281 p~Gh~~~-~lsg~~--sg~~lASgS---~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPDG~~L-aSGS~D~TIk 351 (356)
T 2w18_A 281 PPGQAGR-FLEGDV--KDHCAAAIL---TSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGTDSHL-LAGQKDGNIF 351 (356)
T ss_dssp CTTCCCC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSSSSEE-EEECTTSCEE
T ss_pred cCCCcce-eEcccc--CCCEEEEEc---CCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCCCCEE-EEEECCCcEE
Confidence 34333 333333 378899998 68999999999877433322 3444444 58999999999 8999999999
Q ss_pred EEEec
Q psy17682 375 YFEIT 379 (490)
Q Consensus 375 iwd~~ 379 (490)
|||+.
T Consensus 352 lWd~~ 356 (356)
T 2w18_A 352 VYHYS 356 (356)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 99963
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=5.9e-25 Score=219.57 Aligned_cols=335 Identities=11% Similarity=0.080 Sum_probs=236.0
Q ss_pred EeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEE
Q psy17682 51 LWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEI 130 (490)
Q Consensus 51 ~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~ 130 (490)
.|+|++ .++++++.|++|.+||..+++. ...+.. + ..+..++++|+. ..+
T Consensus 144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~------------------~~~i~~--g----~~~~~v~~spdg-----~~l 193 (543)
T 1nir_A 144 DLDLPN-LFSVTLRDAGQIALVDGDSKKI------------------VKVIDT--G----YAVHISRMSASG-----RYL 193 (543)
T ss_dssp CCCGGG-EEEEEEGGGTEEEEEETTTCCE------------------EEEEEC--S----TTEEEEEECTTS-----CEE
T ss_pred ccCCCC-EEEEEEcCCCeEEEEECCCceE------------------EEEEec--C----cccceEEECCCC-----CEE
Confidence 388988 8999999999999999988652 111110 0 125688999996 345
Q ss_pred EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC----CCCCEEEEEe-CCCcEEEEECCCCCcccccc
Q psy17682 131 RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP----HDDNVIASGS-EDCVVKVWQIPDGGISRTLT 205 (490)
Q Consensus 131 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p----~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~ 205 (490)
++++.++.|.+|++.. .+ ...+..+. +...+..++|+| +| +++++++ .+++|.+||..+++.+..+.
T Consensus 194 ~v~~~d~~V~v~D~~~---~t---~~~~~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 194 LVIGRDARIDMIDLWA---KE---PTKVAEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp EEEETTSEEEEEETTS---SS---CEEEEEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred EEECCCCeEEEEECcC---CC---CcEEEEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeec
Confidence 5566779999999830 01 12334454 445689999999 99 6777776 58999999999988877654
Q ss_pred cceeeec---ccc-cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEe-C
Q psy17682 206 EPVVDLL---YHQ-RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTC-K 278 (490)
Q Consensus 206 ~~~~~~~---~~~-~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~ 278 (490)
....... .|. ..+..+.++|+++.++++...++.|.+||+.+.+.+. .+. +...+..++|+|+|+++++++ .
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~ 344 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANN 344 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGG
T ss_pred ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecC
Confidence 3211111 133 3789999999887778888889999999998766443 443 566788999999999877655 5
Q ss_pred CCeEEEEeCCCCceeeeeee----cCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCC----CeEEEec-cCC
Q psy17682 279 DKKMRIINPRTGAIEEEAVC----HEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DTS 348 (490)
Q Consensus 279 dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~~ 348 (490)
+++|.+||+.+++++..+.. |.+. ... .++|+ +.+++++.. .+++|.+||..+... ...+..+ .+.
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~-~~~p~~g~~~~s~~~--~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g 420 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKTPHPGR-GAN-FVHPKYGPVWSTSHL--GDGSISLIGTDPKNHPQYAWKKVAELQGQG 420 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSBCCTT-CEE-EEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred CCeEEEEECCCCeEEEeeccCCCCCCCC-Ccc-cCCCCCccEEEeccC--CCceEEEEEeCCCCCchhcCeEEEEEEcCC
Confidence 89999999999998888774 3322 222 25787 666666631 368999999987211 1223333 344
Q ss_pred CceeeeeecCCCCeEEEEe--c----CCCeEEEEEecCCCCeeEEeee------eeCCCceeeEEEeeCceeEEee----
Q psy17682 349 NGVMFPLYDPDTNLVYLCG--K----GDSVIRYFEITAEPPFVHYINT------FQTPDPQRGIGMMPKRGCDVNS---- 412 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g--~----~dg~i~iwd~~~~~~~~~~~~~------~~~~~~i~~~~~sp~~~~l~~~---- 412 (490)
.++..++++|++++|++.. . .++.|.+||+.+.+...+.+.. -.+...+.+++|+|+|..++.+
T Consensus 421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 5678899999999996433 1 2679999999998744333311 1235679999999999887744
Q ss_pred ---cceeEEEEecCCCceE
Q psy17682 413 ---CEIGRFFRLNNSGLCQ 428 (490)
Q Consensus 413 ---~~~~~~~~~~~~~~~~ 428 (490)
++.+.+|+..+++++.
T Consensus 501 ~~~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 501 KNDSSALVVVDDKTLKLKA 519 (543)
T ss_dssp TTSCCEEEEEETTTTEEEE
T ss_pred CCCCCeEEEEECCCceEEE
Confidence 3678899988887443
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.2e-24 Score=217.39 Aligned_cols=310 Identities=14% Similarity=0.096 Sum_probs=223.7
Q ss_pred eeeeccCCCCCcEEecc-cccceeeeEEeccCCCceEEeeeCCCeEEEEeC--CCCCCCCCCCccccceeccccceeecc
Q psy17682 25 LTYFSPRTLTEPVVDLL-YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISL--KDGYIPPSEKSKSALKVTKRSNVLDKV 101 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~-gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (490)
+..|+..+. +.+.++. ||. +.+++|+|++ ++|++++.|++|++||+ .++. ....+
T Consensus 161 V~v~D~~t~-~~~~~i~~g~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~------------------~~~~i 218 (543)
T 1nir_A 161 IALVDGDSK-KIVKVIDTGYA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT------------------KVAEI 218 (543)
T ss_dssp EEEEETTTC-CEEEEEECSTT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE------------------EEEEE
T ss_pred EEEEECCCc-eEEEEEecCcc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCc------------------EEEEE
Confidence 555665443 3455565 554 8999999999 89999999999999999 4432 11111
Q ss_pred cCCCCCcccccCCeeEecc----ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec----------cc-C
Q psy17682 102 GGKGGANRNSTANEITISE----DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG----------HK-G 166 (490)
Q Consensus 102 ~~~~~~~~~~~v~~~~~s~----~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~----------h~-~ 166 (490)
.. ......++|+| ++ ++ +.++...++.+.+|+.. +.+ .+.++.. |. .
T Consensus 219 ~~------g~~p~~va~sp~~~~dg--~~--l~v~~~~~~~v~v~D~~-----t~~---~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 219 KI------GIEARSVESSKFKGYED--RY--TIAGAYWPPQFAIMDGE-----TLE---PKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp EC------CSEEEEEEECCSTTCTT--TE--EEEEEEESSEEEEEETT-----TCC---EEEEEECCEECSSSCCEESCC
T ss_pred ec------CCCcceEEeCCCcCCCC--CE--EEEEEccCCeEEEEecc-----ccc---cceeecccCcccCccccccCC
Confidence 11 11357889999 75 22 22333458999999874 222 2233322 33 3
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~ 246 (490)
.+.++.++|++..++++...+++|.+||+.+.+.+... .+ .+...+.++.|+|+++.+++++..+++|.+||+.
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~-----~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT-----SI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE-----EE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeE-----Ee-ccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 79999999988788888999999999999877654311 12 2556788999999997445555568999999999
Q ss_pred CCeeEEEEec----CCCcEEEEEEcCC-CCEEEEEe-CCCeEEEEeCCC-------CceeeeeeecCCCceeEEEEeCCC
Q psy17682 247 TGEIMIQIEC----HPDIVYSASWNWD-GSKLLTTC-KDKKMRIINPRT-------GAIEEEAVCHEGSKATRAIYLKSG 313 (490)
Q Consensus 247 ~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~s~~~ 313 (490)
+++++..+.. |.+....+ ++|+ +..++++. .|++|.+||+.+ .++++++..+.+. ...+.++|+|
T Consensus 355 tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-~~~v~~~pdg 432 (543)
T 1nir_A 355 DRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKS 432 (543)
T ss_dssp TTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTC
T ss_pred CCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-ceEEEcCCCC
Confidence 9999888873 54433333 4777 56666665 589999999998 8889999887664 7889999999
Q ss_pred cEEEEEeCCC----ceeEEEEecCCCCCCCeEEEec-------cCCCceeeeeecCCCCeEEEEe----cCCCeEEEEEe
Q psy17682 314 LIFTTGFSKM----SERQYSLRAPDHLDEPIVMVEL-------DTSNGVMFPLYDPDTNLVYLCG----KGDSVIRYFEI 378 (490)
Q Consensus 314 ~~l~~~~~~~----~~~~i~iwd~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~g----~~dg~i~iwd~ 378 (490)
+.|++++... .++.|.+||+.+.+........ .+...+..+.|+|+|+.++++. +.|+.|.|||.
T Consensus 433 ~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 433 SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp CEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred CcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 9999886211 2679999999998866343321 3356799999999999997663 25799999999
Q ss_pred cCCC
Q psy17682 379 TAEP 382 (490)
Q Consensus 379 ~~~~ 382 (490)
.+++
T Consensus 513 ~t~~ 516 (543)
T 1nir_A 513 KTLK 516 (543)
T ss_dssp TTTE
T ss_pred CCce
Confidence 9987
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1e-24 Score=227.94 Aligned_cols=341 Identities=11% Similarity=0.007 Sum_probs=219.6
Q ss_pred cceeeeEEeccCCCceEEeeeC-CC-----eEEEEeCCCCCCCCCCCccccc----eeccccceeecccCCCCCcccccC
Q psy17682 44 QRRVGLVLWHPTAQNVLLTAGK-EA-----EPILISLKDGYIPPSEKSKSAL----KVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 44 ~~~V~~v~~~p~~~~~l~s~~~-D~-----~v~iWd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
...|.+++|+|+| +.|++++. |+ .|++||+.+++........... .+........... .......+
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQ---RIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------CCEES
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhh---hhccccCc
Confidence 4579999999999 78888887 88 9999999887521100000000 0000000000000 00001247
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
..++|||++ +. ++.+.. +.+.+|++.. +. ......+..|...+.+++|+|+| ++|+.++. +.|++|
T Consensus 112 ~~~~~SpDg--~~---l~~~~~-~~i~~~d~~~-----~~-~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~~-~~i~~~ 177 (741)
T 2ecf_A 112 VDYQWSPDA--QR---LLFPLG-GELYLYDLKQ-----EG-KAAVRQLTHGEGFATDAKLSPKG-GFVSFIRG-RNLWVI 177 (741)
T ss_dssp CCCEECTTS--SE---EEEEET-TEEEEEESSS-----CS-TTSCCBCCCSSSCEEEEEECTTS-SEEEEEET-TEEEEE
T ss_pred ceeEECCCC--CE---EEEEeC-CcEEEEECCC-----CC-cceEEEcccCCcccccccCCCCC-CEEEEEeC-CcEEEE
Confidence 899999996 22 222222 8999999852 20 00233456788899999999999 78888874 599999
Q ss_pred ECCCCCccccccccee-eeccc--------ccCEEEEEEeeCCCCEEEEEeCCC--------------------------
Q psy17682 194 QIPDGGISRTLTEPVV-DLLYH--------QRRVGLVLWHPTAQNVLLTAGSDN-------------------------- 238 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~-~~~~~--------~~~v~~~~~~p~~~~~l~s~~~dg-------------------------- 238 (490)
|+.+++.......... ...++ ...+.+++|+|+|+ .|++++.|+
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 9988765432211000 00000 01247899999996 677776554
Q ss_pred -------cEEEEECCC-CeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCceeeeeeecCCC-
Q psy17682 239 -------NVAIWNVGT-GEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK-----DKKMRIINPRTGAIEEEAVCHEGS- 302 (490)
Q Consensus 239 -------~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~- 302 (490)
.|.+||+.+ ++...... .|...+..++| |||+.|++++. +..|++||+.+++....+..+...
T Consensus 257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 789999988 77654432 36778999999 99999987764 567999999999887766655432
Q ss_pred --ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee-eecCCCCeEEEEecCCC--eEEEEE
Q psy17682 303 --KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP-LYDPDTNLVYLCGKGDS--VIRYFE 377 (490)
Q Consensus 303 --~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~g~~dg--~i~iwd 377 (490)
.+..++|+|+|++++++. .++.++||..+.... ......+...+..+ .|+|+|+.|+++++.++ .++||+
T Consensus 336 ~~~~~~~~~spdg~~~~~~~---~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSE---RTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp CCCCSCCEECTTSCEEEEEC---TTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred CCcCCceEECCCCeEEEEec---CCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 246789999999888776 455555555442222 22222344567776 59999999877787776 899999
Q ss_pred ecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682 378 ITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 412 (490)
+.........+ .....+..++|+||+..++..
T Consensus 411 ~~~~g~~~~~l---~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 411 VPLQGGQPQRL---SKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp EETTCCCCEEC---CCSCSEEEEEECTTSSEEEEE
T ss_pred EEcCCCCeeec---ccCCCceEEEECCCCCEEEEE
Confidence 97532222233 234568899999999887765
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=5e-24 Score=206.46 Aligned_cols=285 Identities=10% Similarity=0.033 Sum_probs=201.0
Q ss_pred cCCeeEeccccccceEEEEEeeCCCc----eEEEECC--CCCCCCcccCCCCc--ceeecccCCeeEEEECC--------
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKSQQ----ALSILPP--PSTAPNTGRINADH--ALVGGHKGPVLDIAWSP-------- 175 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~~g----~i~v~~~--~~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p-------- 175 (490)
.++...|++........--.....+| .+++|++ .. + +.+ ..+.+|...+..+++++
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 135 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAP-----G---TVLAQNSYKVNKQWLRYAGHTASDEVFEKL 135 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSST-----T---CEEEEEEEEECGGGHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCC-----C---CEEeeeEEEcChhHHHHHHHHHHHHHHHHH
Confidence 45666777665332222222234567 8999998 41 1 122 35778888888887764
Q ss_pred ------CCCCEEEEEeCC------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC---cE
Q psy17682 176 ------HDDNVIASGSED------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NV 240 (490)
Q Consensus 176 ------~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v 240 (490)
.+ ..++.++.+ +.|++||+..+ .... +.+|...+.+++|+|+|+ .|++++.++ .|
T Consensus 136 ~g~~~~~~-~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~-------l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i 205 (415)
T 2hqs_A 136 TGIKGAFR-TRIAYVVQTNGGQFPYELRVSDYDGY-NQFV-------VHRSPQPLMSPAWSPDGS-KLAYVTFESGRSAL 205 (415)
T ss_dssp HSSCCCTT-CEEEEEEECSSSSCCEEEEEEETTSC-SCEE-------EEEESSCEEEEEECTTSS-EEEEEECTTSSCEE
T ss_pred cCCCCcCC-CEEEEEEecCCCCccceEEEEcCCCC-CCEE-------EeCCCCcceeeEEcCCCC-EEEEEEecCCCcEE
Confidence 14 455555543 79999998643 3332 445889999999999996 888888875 99
Q ss_pred EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682 241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317 (490)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 317 (490)
++||+.+++.. .+..|...+.+++|+|+|+.|+ +++.++. |++||+++++. ..+..+.. .+..++|+|+|+.|+
T Consensus 206 ~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~-~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 206 VIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS-NNTEPTWFPDSQNLA 282 (415)
T ss_dssp EEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS-CEEEEEECTTSSEEE
T ss_pred EEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC-cccceEECCCCCEEE
Confidence 99999988875 4666888999999999999888 5665554 99999998876 44555554 489999999999888
Q ss_pred EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCCCeeEEeeeeeCCC
Q psy17682 318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEPPFVHYINTFQTPD 395 (490)
Q Consensus 318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~~~~~~~~~~~~~~ 395 (490)
+++.+.....|.+||+.++.. . ....+...+..++|+|+|++|++++.. +..|++||+.+++. ..+ ..+.
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~-~--~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l---~~~~ 354 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAP-Q--RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVL---SSTF 354 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCC-E--ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EEC---CCSS
T ss_pred EEECCCCCcEEEEEECCCCCE-E--EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEe---cCCC
Confidence 887432334788899887652 1 112344568899999999999655544 35899999998862 222 2223
Q ss_pred ceeeEEEeeCceeEEeecc-----eeEEEEecCCC
Q psy17682 396 PQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSG 425 (490)
Q Consensus 396 ~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~ 425 (490)
.+.+++|+|+|.+++.++. .+.+|++..+.
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 7899999999998776643 35566665443
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=3.7e-23 Score=196.08 Aligned_cols=235 Identities=10% Similarity=0.069 Sum_probs=175.8
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeee--cccccCEEEEEEeeCCCCEEEEEe--CCCcEEE
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL--LYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAI 242 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~s~~--~dg~v~i 242 (490)
.+.+++|+|+|..+++++..++.|.+||..+++....+....... ......+.+++|+|+++ .+++++ .++.|.+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWV 168 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEE
Confidence 356789999985466666778999999999888766543210000 00011278999999996 555544 4789999
Q ss_pred EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec---CCCceeEEEEeCCCcEEEEE
Q psy17682 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH---EGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~~ 319 (490)
||+.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.+++....+... ....+..++|+|+|+.++++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred EcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 999999998888756666889999999999999999999999999999888776641 12237789999999977666
Q ss_pred eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG 399 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 399 (490)
.. .++.|.+||..+++...... .. . ...++|+|+|++++++...++.|.+||..+++ .+..+..+..+.+
T Consensus 249 ~~--~~~~v~~~d~~~~~~~~~~~-~~--~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~ 318 (353)
T 3vgz_A 249 DS--KAAEVLVVDTRNGNILAKVA-AP--E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK----VVKTFDTPTHPNS 318 (353)
T ss_dssp ES--SSSEEEEEETTTCCEEEEEE-CS--S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE----EEEEEECCSEEEE
T ss_pred eC--CCCEEEEEECCCCcEEEEEE-cC--C-CceEEECCCCCEEEEEECCCCeEEEEECCCCe----EEEEEecCCCCCe
Confidence 52 45899999998765432222 22 2 35789999999888888789999999999886 3344455567899
Q ss_pred EEEeeCceeEEee
Q psy17682 400 IGMMPKRGCDVNS 412 (490)
Q Consensus 400 ~~~sp~~~~l~~~ 412 (490)
++|+|++++++.+
T Consensus 319 ~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 319 LALSADGKTLYVS 331 (353)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEE
Confidence 9999999865544
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.1e-22 Score=191.20 Aligned_cols=284 Identities=9% Similarity=0.071 Sum_probs=197.7
Q ss_pred EEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682 50 VLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE 129 (490)
Q Consensus 50 v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 129 (490)
..|.+++..++++++.++.|.+||..+++... .... + .... .++|+|+.. .+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~------------------~~~~-~----~~~~-~~~~s~dg~----~l 54 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILN------------------QITL-G----YDFV-DTAITSDCS----NV 54 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEE------------------EEEC-C----CCEE-EEEECSSSC----EE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceee------------------eEEc-c----CCcc-eEEEcCCCC----EE
Confidence 35667776789999999999999998865211 1110 0 1123 789999862 24
Q ss_pred EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC---cEEEEECCCCCccccccc
Q psy17682 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC---VVKVWQIPDGGISRTLTE 206 (490)
Q Consensus 130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~ 206 (490)
+++...++.+.+|++. .++. ....+..+..+..+++|+|+| ++++++..++ .|.+||+.+++.+..+.
T Consensus 55 ~~~~~~~~~i~~~d~~-----~~~~--~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~- 125 (331)
T 3u4y_A 55 VVTSDFCQTLVQIETQ-----LEPP--KVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIP- 125 (331)
T ss_dssp EEEESTTCEEEEEECS-----SSSC--EEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEE-
T ss_pred EEEeCCCCeEEEEECC-----CCce--eEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEE-
Confidence 4556668899999985 2221 144556677777669999998 7777555553 89999998887655432
Q ss_pred ceeeecccccCEEEEEEeeCCCCEEEEEeCCCc-EEEEECCCCeeE----EEEecCCCcEEEEEEcCCCCEEEEEe-CCC
Q psy17682 207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN-VAIWNVGTGEIM----IQIECHPDIVYSASWNWDGSKLLTTC-KDK 280 (490)
Q Consensus 207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-v~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg 280 (490)
+.....+++|+|+++.++++...++. |.+|++.....+ ............++|+|+|+++++++ .++
T Consensus 126 -------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 126 -------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp -------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred -------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 34457899999999766677677788 999998754332 11223456689999999999665554 689
Q ss_pred eEEEEeCCCCce---eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-C----CC---
Q psy17682 281 KMRIINPRTGAI---EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-T----SN--- 349 (490)
Q Consensus 281 ~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~----~~--- 349 (490)
.|++||+.+++. +..+... ..+..++|+|+|++++++.. .++.|.+||+.+++... ..... . ..
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSF-VKSFGHGLLIDPRPLF 273 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEE-EEEEECCCCCCCGGGT
T ss_pred eEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceee-ecccccccccCCCCcc
Confidence 999999999887 6666543 23788999999997766542 47889999998754311 11111 1 11
Q ss_pred ceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 350 GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 350 ~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
....++|+|+|++|++++..++.|.+||+....
T Consensus 274 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 124589999999998888888899999998753
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.9e-24 Score=222.98 Aligned_cols=332 Identities=10% Similarity=0.029 Sum_probs=212.3
Q ss_pred eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682 46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE 125 (490)
Q Consensus 46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 125 (490)
.+.+++|+|++ .++++ +.||+|++||+.+++... .. ..... ....+..++|||++ +
T Consensus 18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~~----------------~~--~~~~~--~~~~v~~~~~SpDg--~ 73 (723)
T 1xfd_A 18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTSTV----------------LI--EGKKI--ESLRAIRYEISPDR--E 73 (723)
T ss_dssp CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCEE----------------EE--CTTTT--TTTTCSEEEECTTS--S
T ss_pred cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEEE----------------Ee--ccccc--cccccceEEECCCC--C
Confidence 47789999999 56666 789999999998875211 11 11000 01147899999996 3
Q ss_pred eEEEEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 126 FKEEIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 126 ~~~~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
++...... ..++.+.+|++. .++. ..+....+|...+..++|+|+| +.|+.++. +.|++||+.+++
T Consensus 74 ~l~~~~~~~~~~~~~~~~~i~~~d~~-----~~~~-~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 74 YALFSYNVEPIYQHSYTGYYVLSKIP-----HGDP-QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp EEEEEESCCCCSSSCCCSEEEEEESS-----SCCC-EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSC
T ss_pred EEEEEecCccceeecceeeEEEEECC-----CCce-EeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCc
Confidence 22222111 113789999985 2221 1122234566679999999999 77888775 799999998876
Q ss_pred ccccccccee--eecccc---------cCEEEEEEeeCCCCEEEEEeCCC------------------------------
Q psy17682 200 ISRTLTEPVV--DLLYHQ---------RRVGLVLWHPTAQNVLLTAGSDN------------------------------ 238 (490)
Q Consensus 200 ~~~~~~~~~~--~~~~~~---------~~v~~~~~~p~~~~~l~s~~~dg------------------------------ 238 (490)
.......... .+.++. ..+.+++|+|+|+ .|++++.|+
T Consensus 146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 224 (723)
T 1xfd_A 146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE 224 (723)
T ss_dssp CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC
T ss_pred eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC
Confidence 6443221000 000010 1337899999996 777776543
Q ss_pred ----cEEEEECCCCeeEEEEecC------CCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCceeeeeeecCCCce
Q psy17682 239 ----NVAIWNVGTGEIMIQIECH------PDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGAIEEEAVCHEGSKA 304 (490)
Q Consensus 239 ----~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~ 304 (490)
.|++||+.+++....+..+ ...+..++|+|||+++++.+. +..|++||+.+++....+..+....+
T Consensus 225 ~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 225 NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (723)
T ss_dssp CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence 7999999988765666543 567899999999998877653 35799999999987766554322222
Q ss_pred ----eEEEEeCCCcEEEEE-eCCCc----eeEEEEec-CCCCCC--CeEEEeccCCCceee-eeecCCCCeEEEEecCC-
Q psy17682 305 ----TRAIYLKSGLIFTTG-FSKMS----ERQYSLRA-PDHLDE--PIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGD- 370 (490)
Q Consensus 305 ----~~~~~s~~~~~l~~~-~~~~~----~~~i~iwd-~~~~~~--~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~d- 370 (490)
..++|+|||+.|+.. ++... ...|.+|| ...... ...+. .+...+.. ++|+|||+.|++++..+
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~ 382 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDL 382 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSC
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCC
Confidence 378999999977654 32111 23678888 343320 22211 12233444 68999999997777666
Q ss_pred -CeEEEEEecCCCC-eeEEeee-eeCCCceeeEEEeeCceeEEee
Q psy17682 371 -SVIRYFEITAEPP-FVHYINT-FQTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 371 -g~i~iwd~~~~~~-~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~ 412 (490)
+.+++|++..... ....+.. +.+...+..++|+|||+.++..
T Consensus 383 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 383 PRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp TTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred CcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 8899999975431 1112211 1134568899999999887765
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=8.4e-23 Score=192.66 Aligned_cols=277 Identities=13% Similarity=0.133 Sum_probs=190.3
Q ss_pred EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC-CcEEEEECC--CCCccccccc
Q psy17682 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED-CVVKVWQIP--DGGISRTLTE 206 (490)
Q Consensus 130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d-g~i~iwd~~--~~~~~~~~~~ 206 (490)
+++...++.|.+|++. ..+.. ..... ..|...+.+++|+|++ .+|++++.+ +.|++|++. +++...
T Consensus 8 ~~~~~~~~~v~~~~~~----~~~~~-~~~~~-~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~---- 76 (343)
T 1ri6_A 8 YIASPESQQIHVWNLN----HEGAL-TLTQV-VDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTF---- 76 (343)
T ss_dssp EEEEGGGTEEEEEEEC----TTSCE-EEEEE-EECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEE----
T ss_pred EEeCCCCCeEEEEEEC----CCCcE-EEeee-EecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceee----
Confidence 4444779999999885 22221 11222 3577889999999998 677777766 999999997 444221
Q ss_pred ceeeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECC---CCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCe
Q psy17682 207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVG---TGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKK 281 (490)
Q Consensus 207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~ 281 (490)
...+..+ ..+.+++|+|+++ .+++++ .++.|.+||+. ..+.+..+. ....+.+++|+|+++++++++ .++.
T Consensus 77 -~~~~~~~-~~~~~~~~s~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~ 152 (343)
T 1ri6_A 77 -AAESALP-GSLTHISTDHQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDR 152 (343)
T ss_dssp -EEEEECS-SCCSEEEECTTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred -ccccccC-CCCcEEEEcCCCC-EEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCE
Confidence 1112223 3788999999996 555544 58899999994 344555555 344688999999999888887 8999
Q ss_pred EEEEeCCC-Cceee----eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEe---ccC----C
Q psy17682 282 MRIINPRT-GAIEE----EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVE---LDT----S 348 (490)
Q Consensus 282 i~iwd~~~-~~~~~----~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~---~~~----~ 348 (490)
|++||+.+ ++... ....+.+..+..++|+|+|++++++.. .++.+.+|++..... ...... ... .
T Consensus 153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 99999987 55432 233333445888999999996655442 478999999964221 111111 111 2
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec---ceeEEEEecC
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC---EIGRFFRLNN 423 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~~ 423 (490)
..+..++|+|+|++|++++..++.|.+||+.........+........+.+++|+|++.++++++ +.+.+|+++.
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 34667999999999987888899999999984221233444444444589999999998766654 4788997663
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=6.1e-23 Score=193.59 Aligned_cols=310 Identities=10% Similarity=0.046 Sum_probs=197.5
Q ss_pred ceEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCC
Q psy17682 58 NVLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQ 136 (490)
Q Consensus 58 ~~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~ 136 (490)
.++++++.|+.|++|++.. +.. ....... ....+..++|+|+. ++ +++....+
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~----------------~~~~~~~------~~~~~~~~~~spdg--~~--l~~~~~~~ 59 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL----------------TLTQVVD------VPGQVQPMVVSPDK--RY--LYVGVRPE 59 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE----------------EEEEEEE------CSSCCCCEEECTTS--SE--EEEEETTT
T ss_pred EEEEeCCCCCeEEEEEECCCCcE----------------EEeeeEe------cCCCCceEEECCCC--CE--EEEeecCC
Confidence 4566668899999999863 220 0111111 12247789999985 21 23334445
Q ss_pred ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682 137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ 215 (490)
Q Consensus 137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (490)
+.+.+|++... .++ ......+..+. .+.+++|+|++ ++++++ ..++.|.+||+.++.... ....+. ..
T Consensus 60 ~~v~~~~~~~~---~~~-~~~~~~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~----~~~~~~-~~ 128 (343)
T 1ri6_A 60 FRVLAYRIAPD---DGA-LTFAAESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVG----VVDVVE-GL 128 (343)
T ss_dssp TEEEEEEECTT---TCC-EEEEEEEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEE----EEEEEC-CC
T ss_pred CeEEEEEecCC---CCc-eeeccccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcccc----cccccc-CC
Confidence 99999988511 111 11223333333 78999999998 555554 458899999985332111 111122 33
Q ss_pred cCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-CeeEE----EEec-CCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeC
Q psy17682 216 RRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-GEIMI----QIEC-HPDIVYSASWNWDGSKLLTTC-KDKKMRIINP 287 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~ 287 (490)
..+.+++|+|+++ .+++++ .++.|.+||+.+ ++... .+.. ....+..++|+|+++++++++ .++.|++||+
T Consensus 129 ~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 129 DGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp TTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4588999999996 566665 889999999987 65432 2232 345788999999999776555 7899999999
Q ss_pred CC--Cce--eeeeeec----C-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CCeEEEeccCCCceeeeeec
Q psy17682 288 RT--GAI--EEEAVCH----E-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYD 357 (490)
Q Consensus 288 ~~--~~~--~~~~~~~----~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s 357 (490)
.. ++. ....... . ...+..++|+|+|++|+++.. .++.|.+||+.... .............+..++|+
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD 285 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecCCCccceEEEC
Confidence 54 432 2222211 1 123668999999987765442 47899999998422 12222233333448899999
Q ss_pred CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce
Q psy17682 358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG 407 (490)
Q Consensus 358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~ 407 (490)
|+|++|++++..++.|.+|++.......+.+..+..+....+++|.|+..
T Consensus 286 ~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 286 HSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp TTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred CCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 99999977666889999997764322234455555555678888888643
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=3.5e-22 Score=187.65 Aligned_cols=275 Identities=12% Similarity=0.068 Sum_probs=191.4
Q ss_pred EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc-ccccccc
Q psy17682 129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI-SRTLTEP 207 (490)
Q Consensus 129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~ 207 (490)
.+++...++.|.+|+.. .++ ....+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...
T Consensus 12 ~~v~~~~~~~v~~~d~~-----~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~---- 78 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTD-----TLE---ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA---- 78 (331)
T ss_dssp EEEEEGGGTEEEEEETT-----TCC---EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE----
T ss_pred EEEEecCCCeEEEEeCc-----ccc---eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe----
Confidence 45667788999999985 222 233444555666 9999999843445555589999999988875 332
Q ss_pred eeeecccccCEEEEEEeeCCCCEEEEEeCCC---cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE-eCCCe-E
Q psy17682 208 VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT-CKDKK-M 282 (490)
Q Consensus 208 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i 282 (490)
+..+..+..+++|+|+++ +++++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++++ ..++. |
T Consensus 79 ---~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 79 ---IQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp ---EEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ---cccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceE
Confidence 223455555599999996 677554442 899999999998888774 4567999999999865555 55578 9
Q ss_pred EEEeCCCCceeeee---eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682 283 RIINPRTGAIEEEA---VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD 359 (490)
Q Consensus 283 ~iwd~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 359 (490)
.+|++.....+... ....+..+..++|+|+|++++++.. .++.|.+||+.+++.............+..++|+|+
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd 231 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD 231 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCceEEECCC
Confidence 99999864433111 1122334889999999986655442 478999999987665222334445567889999999
Q ss_pred CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-----CCc---eeeEEEeeCceeEEee---cceeEEEEecCCC
Q psy17682 360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-----PDP---QRGIGMMPKRGCDVNS---CEIGRFFRLNNSG 425 (490)
Q Consensus 360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~---i~~~~~sp~~~~l~~~---~~~~~~~~~~~~~ 425 (490)
|++++++...++.|.+||+.+++. ..+..+.. ..+ ..+++|+|+++.++.+ ++.+.+|++....
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSGTL--SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTTEE--EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCEEEEEEcCCCEEEEEECCCCce--eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 999877777788999999998762 11222211 112 3558999999876544 3378899987654
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=7.1e-23 Score=212.82 Aligned_cols=339 Identities=10% Similarity=0.050 Sum_probs=212.4
Q ss_pred eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCC-CCCCccccceeccccceeecccCCC--CCcccccCCeeEecccc
Q psy17682 46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIP-PSEKSKSALKVTKRSNVLDKVGGKG--GANRNSTANEITISEDY 122 (490)
Q Consensus 46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~ 122 (490)
.+..+.|. + ..+++++.|+ | +||+.+++.. ... .........+.... .......+..++|||+.
T Consensus 27 ~~~~~~w~--g-~~~~~~~~~~-i-~~d~~tg~~~~~~l--------~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~ 93 (706)
T 2z3z_A 27 YVVGLQWM--G-DNYVFIEGDD-L-VFNKANGKSAQTTR--------FSAADLNALMPEGCKFQTTDAFPSFRTLDAGRG 93 (706)
T ss_dssp -CTTCEEE--T-TEEEEEETTE-E-EEEC-------CEE--------EEHHHHHTTC-----------CCCEEEEETTTT
T ss_pred cCCCCcCc--C-CeEEEEeCCc-E-EEECCCCcEeeEEe--------echhHhhhhccchhccccccccCceeEEECCCC
Confidence 46778888 5 4566677777 8 9999987631 100 00000000000000 00111358899999982
Q ss_pred ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-----
Q psy17682 123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD----- 197 (490)
Q Consensus 123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~----- 197 (490)
. ++.+ .++.+.+|++. .++ ...+..|...+.+++|+|+| +.|+++ .|+.|++|++.+
T Consensus 94 --~---~~~~--~~~~i~~~d~~-----~~~----~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 94 --L---VVLF--TQGGLVGFDML-----ARK----VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp --E---EEEE--ETTEEEEEETT-----TTE----EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCC
T ss_pred --e---EEEE--ECCEEEEEECC-----CCc----eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccC
Confidence 2 2222 34999999985 222 23445677889999999999 778775 679999999988
Q ss_pred CCccccccccee-------eecccccCEEEEEEeeCCCCEEEEEe---------------------------------CC
Q psy17682 198 GGISRTLTEPVV-------DLLYHQRRVGLVLWHPTAQNVLLTAG---------------------------------SD 237 (490)
Q Consensus 198 ~~~~~~~~~~~~-------~~~~~~~~v~~~~~~p~~~~~l~s~~---------------------------------~d 237 (490)
++.......... ....+...+.++.|+|+|+ .|++++ .+
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 665432211000 0000112258999999996 777776 44
Q ss_pred CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeeeee-ecCCC---ceeE
Q psy17682 238 NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIEEEAV-CHEGS---KATR 306 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~-~~~~~---~~~~ 306 (490)
..|.+||+.+++...... .|...+.+++|+|||+.|++++.++ .|++||+.+++....+. ..... .+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999999887654432 4667799999999999999988775 89999999984444333 22211 1357
Q ss_pred EEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee-eeecCCCCeEEEEecCCC----eEEEEEec
Q psy17682 307 AIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGDS----VIRYFEIT 379 (490)
Q Consensus 307 ~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~dg----~i~iwd~~ 379 (490)
+.|+| +|++++++. .++.+++|+++....... ....+...+.. ++|+|+|+.|+++++.++ .|+.||+.
T Consensus 315 ~~~sp~~dg~~l~~~~---~~g~~~l~~~~~~~~~~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSR---RDGWNHLYLYDTTGRLIR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp CEECTTCSSEEEEEEC---TTSSCEEEEEETTSCEEE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred ceeecCCCCEEEEEEc---cCCccEEEEEECCCCEEE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 89999 999888886 456677776652221111 11233445665 799999999977777765 66666666
Q ss_pred CCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc------eeEEEEecCCC
Q psy17682 380 AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE------IGRFFRLNNSG 425 (490)
Q Consensus 380 ~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------~~~~~~~~~~~ 425 (490)
+++ ...+ .+...+.+++|+|||++++..+. .+.+|++.++.
T Consensus 391 ~~~--~~~l---~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 391 GGK--TKDL---TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CCC--CEES---CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCC--ceec---cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 654 2222 34557899999999987775522 36788877654
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.3e-22 Score=219.43 Aligned_cols=350 Identities=10% Similarity=0.024 Sum_probs=234.1
Q ss_pred eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCC------CeEEEEeCCCCCCCCCCCccccceecccccee
Q psy17682 25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKE------AEPILISLKDGYIPPSEKSKSALKVTKRSNVL 98 (490)
Q Consensus 25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D------~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (490)
+..++.. ......+.+|...|.+++|||+| +.|++++.+ ..|.+|++.++... .+.......
T Consensus 35 l~~~~~~--gg~~~~lt~~~~~v~~~~~SPDG-~~la~~s~~~~~~~~~~i~~~d~~~g~~~---------~lt~~~~~~ 102 (1045)
T 1k32_A 35 LWEHDLK--SGSTRKIVSNLGVINNARFFPDG-RKIAIRVMRGSSLNTADLYFYNGENGEIK---------RITYFSGKS 102 (1045)
T ss_dssp EEEEETT--TCCEEEEECSSSEEEEEEECTTS-SEEEEEEEESTTCCEEEEEEEETTTTEEE---------ECCCCCEEE
T ss_pred EEEEECC--CCcEEEeeeCCCcccCeEECCCC-CEEEEEEeeccCCCCCeEEEEECCCCCeE---------EcccCCCcc
Confidence 4445543 34567788999999999999999 777766543 48999998875410 000000000
Q ss_pred ecccCCCCCcccccCCeeEeccccccceEEEEEeeCC------CceEEEECCCCCCCCc---c-----------------
Q psy17682 99 DKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKS------QQALSILPPPSTAPNT---G----------------- 152 (490)
Q Consensus 99 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~------~g~i~v~~~~~~~~~~---~----------------- 152 (490)
..+...+..++|||++ + +++++.. ...+.+|++....... .
T Consensus 103 --------~~~~~~~~~~~~SpDg--~---ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~ 169 (1045)
T 1k32_A 103 --------TGRRMFTDVAGFDPDG--N---LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRN 169 (1045)
T ss_dssp --------ETTEECSEEEEECTTC--C---EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEES
T ss_pred --------cccccccccccCCCCC--E---EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEecc
Confidence 0011234678888886 2 3333332 2345555543211000 0
Q ss_pred ----------------c-----CCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceee
Q psy17682 153 ----------------R-----INADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVD 210 (490)
Q Consensus 153 ----------------~-----~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 210 (490)
+ .......+.+|.+.+.++.|+++ .++++++.|+.++||.+.. +.....
T Consensus 170 ~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~------- 240 (1045)
T 1k32_A 170 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRK------- 240 (1045)
T ss_dssp CSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEE-------
T ss_pred CCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceE-------
Confidence 0 00122344689999999999985 5778888899999998753 322222
Q ss_pred ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-----------CCCcEEEEEEc-CCCCEEEEEeC
Q psy17682 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-----------HPDIVYSASWN-WDGSKLLTTCK 278 (490)
Q Consensus 211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~ 278 (490)
+..|. .+..++|+|+|+ .++.+ .++.|.+||+...+ +..+.. |...+.+++|+ |+|+.|++++
T Consensus 241 l~~~~-~~~~~~~SpDG~-~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 241 HTSFT-DYYPRHLNTDGR-RILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp CCCCC-SSCEEEEEESSS-CEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred ecCCC-CcceeeEcCCCC-EEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 22243 456779999996 56666 48999999995443 345543 23368899999 9999999888
Q ss_pred CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE-EecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682 279 DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS-LRAPDHLDEPIVMVELDTSNGVMFPLYD 357 (490)
Q Consensus 279 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~-iwd~~~~~~~~~~~~~~~~~~i~~~~~s 357 (490)
++.+++|++..++... +..+....+..++|+ +|+.++.+++ +..+. +|++..... . .. ..+...+..++|+
T Consensus 316 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~---~~~l~~~~d~~~~~~-~-~l-~~~~~~~~~~~~S 387 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTR---EGDFLGIYDYRTGKA-E-KF-EENLGNVFAMGVD 387 (1045)
T ss_dssp TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEET---TEEEEEEEETTTCCE-E-EC-CCCCCSEEEEEEC
T ss_pred cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEEC---CCceEEEEECCCCCc-e-Ee-cCCccceeeeEEC
Confidence 7899999998876543 444544248899999 9999998873 66788 999886542 1 11 2455678999999
Q ss_pred CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc------------eeEEEEecCCC
Q psy17682 358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE------------IGRFFRLNNSG 425 (490)
Q Consensus 358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------------~~~~~~~~~~~ 425 (490)
|||++| ++++.++.|++||+.+++. ..... .+...+.+++|||||++++.+.. .+++|++.++.
T Consensus 388 pDG~~l-a~~~~~~~v~~~d~~tg~~-~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 388 RNGKFA-VVANDRFEIMTVDLETGKP-TVIER--SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TTSSEE-EEEETTSEEEEEETTTCCE-EEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCCEE-EEECCCCeEEEEECCCCce-EEecc--CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 999999 6778899999999998872 22221 35567899999999998776532 67888887654
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=8.2e-22 Score=213.14 Aligned_cols=337 Identities=7% Similarity=-0.055 Sum_probs=231.0
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
.....+.+|. .+...+|+|++ ..|+.+ .++.|.+|++...... .+.... .............+.
T Consensus 236 ~~~~~l~~~~-~~~~~~~SpDG-~~la~~-~~~~i~~~d~~~~~l~---------~l~~~~----~~~~~~~~~~~~~v~ 299 (1045)
T 1k32_A 236 KDLRKHTSFT-DYYPRHLNTDG-RRILFS-KGGSIYIFNPDTEKIE---------KIEIGD----LESPEDRIISIPSKF 299 (1045)
T ss_dssp CSCEECCCCC-SSCEEEEEESS-SCEEEE-ETTEEEEECTTTCCEE---------ECCCCC----CCBCCSEEEECGGGG
T ss_pred CcceEecCCC-CcceeeEcCCC-CEEEEE-eCCEEEEecCCceEee---------eeccCc----ccccccccccccccc
Confidence 3445566665 46788999999 666666 4899999998432210 000000 000000011223578
Q ss_pred eeEec-cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC-CeeEEEECCCCCCEEEEEeCCCcEE-
Q psy17682 115 EITIS-EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG-PVLDIAWSPHDDNVIASGSEDCVVK- 191 (490)
Q Consensus 115 ~~~~s-~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~~~dg~i~- 191 (490)
.++|| |++ +..... . ++.+.+|+.. .+. ...+..|.+ .+.+++|+ +| ..|+.++.++.+.
T Consensus 300 ~~~~S~pdG--~~la~~---~-~~~i~~~~~~-----~~~----~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~ 362 (1045)
T 1k32_A 300 AEDFSPLDG--DLIAFV---S-RGQAFIQDVS-----GTY----VLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLG 362 (1045)
T ss_dssp EEEEEECGG--GCEEEE---E-TTEEEEECTT-----SSB----EEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEE
T ss_pred eeeecCCCC--CEEEEE---E-cCEEEEEcCC-----CCc----eEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEE
Confidence 99999 995 222222 2 7889999875 121 223456777 89999999 88 7888888888888
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 271 (490)
+|++.+++... +.+|...+..++|+|+|+ .|++++.++.|++||+.+++....+..|...+.+++|+|||+
T Consensus 363 ~~d~~~~~~~~--------l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 363 IYDYRTGKAEK--------FEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp EEETTTCCEEE--------CCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred EEECCCCCceE--------ecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC
Confidence 89987664322 224778899999999996 899999999999999999988877778888999999999999
Q ss_pred EEEEEeCCC----------eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----
Q psy17682 272 KLLTTCKDK----------KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD---- 337 (490)
Q Consensus 272 ~l~~~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~---- 337 (490)
+|++++.++ .|++||+.+++ ...+..+... +..++|+|+|+.|+.++. ++...+|+.....
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~-~~~~~~spdG~~l~~~s~---~~~~~~~~~~~~~~~~~ 508 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH-DYAPAFDADSKNLYYLSY---RSLDPSPDRVVLNFSFE 508 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB-EEEEEECTTSCEEEEEES---CCCCCEECSSSSCEECC
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc-cCCceEcCCCCEEEEEec---ccCCcCcchhccccccc
Confidence 999887654 89999999877 5555555543 788999999999988874 2233333322110
Q ss_pred ---------------CC----------------------eEEEeccCCCceeeeeecCCCCeEEE------------Eec
Q psy17682 338 ---------------EP----------------------IVMVELDTSNGVMFPLYDPDTNLVYL------------CGK 368 (490)
Q Consensus 338 ---------------~~----------------------~~~~~~~~~~~i~~~~~s~~~~~l~~------------~g~ 368 (490)
.+ .......+...+..++++|||+.+++ ...
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~ 588 (1045)
T 1k32_A 509 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 588 (1045)
T ss_dssp SCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCC
T ss_pred cCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccC
Confidence 00 00111123356788999999987743 112
Q ss_pred CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCC
Q psy17682 369 GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSG 425 (490)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~ 425 (490)
....|++||+.+++. ..+. ..+.+++|||||+.++++ .+.+++|++.++.
T Consensus 589 ~~~~l~~~d~~~~~~--~~l~-----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 589 EKGVLLKYDVKTRKV--TEVK-----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp CCEEEEEEETTTCCE--EEEE-----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred CCceEEEEECCCCcE--EEee-----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 355788888888761 2222 468899999999877766 4578999997765
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=7.4e-22 Score=181.79 Aligned_cols=254 Identities=14% Similarity=0.075 Sum_probs=179.6
Q ss_pred eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeeccc
Q psy17682 24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVG 102 (490)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (490)
.+..|+..+ .....+.+|...|.+++|+|++ .+|++++ ++.|.+||+.+ +....
T Consensus 23 ~i~~~d~~~--~~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~--------------------- 77 (297)
T 2ojh_A 23 SIEIFNIRT--RKMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEK--------------------- 77 (297)
T ss_dssp EEEEEETTT--TEEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEE---------------------
T ss_pred eEEEEeCCC--CceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceE---------------------
Confidence 355566543 4455678899999999999999 7777776 78999999877 44100
Q ss_pred CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec-ccCCeeEEEECCCCCCEE
Q psy17682 103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG-HKGPVLDIAWSPHDDNVI 181 (490)
Q Consensus 103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l 181 (490)
...+ +...|.+++|+|++ .+|
T Consensus 78 ---------------------------------------------------------~~~~~~~~~~~~~~~spdg-~~l 99 (297)
T 2ojh_A 78 ---------------------------------------------------------VDTGFATICNNDHGISPDG-ALY 99 (297)
T ss_dssp ---------------------------------------------------------CCCTTCCCBCSCCEECTTS-SEE
T ss_pred ---------------------------------------------------------eccccccccccceEECCCC-CEE
Confidence 0112 23578889999998 788
Q ss_pred EEEe--CCCcEEEEEC--CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEec
Q psy17682 182 ASGS--EDCVVKVWQI--PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIEC 256 (490)
Q Consensus 182 ~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~ 256 (490)
++++ .++..+||.+ .++.. .. +. +...+..++|+|+++.++++++.++.+++|+++. +.....+..
T Consensus 100 ~~~~~~~~~~~~l~~~~~~~~~~-~~-------~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 100 AISDKVEFGKSAIYLLPSTGGTP-RL-------MT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp EEEECTTTSSCEEEEEETTCCCC-EE-------CC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred EEEEeCCCCcceEEEEECCCCce-EE-------ee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence 8888 3345555554 44432 22 22 3335899999999974455888899999998632 233455666
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC--------cee
Q psy17682 257 HPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--------SER 326 (490)
Q Consensus 257 ~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--------~~~ 326 (490)
+...+.+++|+|+++.|++++ .++.+++|++. .+.....+..+.. .+..+.|+|+|++|++++.++ ...
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY-GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE-EEEEEEECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc-ccCCeEECCCCCEEEEEEcCCCCCcccccCce
Confidence 788899999999999888766 58899999886 4455555655544 488899999999988876322 237
Q ss_pred EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682 327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370 (490)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d 370 (490)
.|.+||+.+.+.........+...+..++|+|++++|++++..+
T Consensus 250 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 250 RVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 79999998765433333335566789999999999996655444
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.6e-22 Score=194.11 Aligned_cols=215 Identities=13% Similarity=0.128 Sum_probs=156.2
Q ss_pred cccCCeeEEEECCCCCCEEE----EEeCCCcEEEEECCCC-----CcccccccceeeecccccCEEEEEEeeCCCCEEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIA----SGSEDCVVKVWQIPDG-----GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT 233 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~----s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 233 (490)
.|.+.|.+++|+|++ ++|+ +|+.|++|++||+.++ +..+.+ .....+.+|...|.+++|+|++.++|++
T Consensus 90 ~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 90 PMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPF-AYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp CCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCS-EEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred cCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCccee-eeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 467889999999998 7888 7889999999998654 110000 1123356799999999999985469999
Q ss_pred EeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC------CceeEE
Q psy17682 234 AGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG------SKATRA 307 (490)
Q Consensus 234 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~ 307 (490)
++.||+|++||+++++.+....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..+.. ..+.++
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred EECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 9999999999999987776677788999999999999999999999999999998 555555544322 158899
Q ss_pred EEeCCCcEEEEEeC-CC---ceeEEEEecCCCCCC--CeEEEec-c-------CCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682 308 IYLKSGLIFTTGFS-KM---SERQYSLRAPDHLDE--PIVMVEL-D-------TSNGVMFPLYDPDTNLVYLCGKGDSVI 373 (490)
Q Consensus 308 ~~s~~~~~l~~~~~-~~---~~~~i~iwd~~~~~~--~~~~~~~-~-------~~~~i~~~~~s~~~~~l~~~g~~dg~i 373 (490)
.|++++.++++... ++ ....+++|++++... +...... . .......+.+-++.++++++.+..+.|
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv 326 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEV 326 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBC
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCce
Confidence 99999888765431 11 123599999986532 2222221 1 111122333347788887887777777
Q ss_pred EEEEecC
Q psy17682 374 RYFEITA 380 (490)
Q Consensus 374 ~iwd~~~ 380 (490)
.+.....
T Consensus 327 ~vl~~~~ 333 (434)
T 2oit_A 327 SILARQS 333 (434)
T ss_dssp EEEEECT
T ss_pred eEEEecC
Confidence 7777544
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=5.8e-22 Score=186.40 Aligned_cols=278 Identities=10% Similarity=0.057 Sum_probs=196.3
Q ss_pred EEEeeCCCceEEEECCCCCCCCcccCCCCcceee-cccC-CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682 129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVG-GHKG-PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE 206 (490)
Q Consensus 129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h~~-~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 206 (490)
.++++..++.|.+|+.. .++ ....+. ++.. .+.+++|+|++..++++++.++.|.+||+.+++.+..+..
T Consensus 3 ~~v~~~~~~~v~~~d~~-----~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 3 YILAPARPDKLVVIDTE-----KMA---VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEETTTEEEEEETT-----TTE---EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEcCCCCeEEEEECC-----CCc---EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 56677889999999985 222 222332 2222 5889999999855566777789999999998877654432
Q ss_pred ceeeecccccCEEEEEEeeCCCCEEEEEe------------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682 207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAG------------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL 274 (490)
Q Consensus 207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 274 (490)
+. ...|...+.+++|+|+++ .++++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+
T Consensus 75 ~~--~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 75 ST--PEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLY 150 (337)
T ss_dssp CB--TTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEE
T ss_pred CC--cccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEE
Confidence 10 000223567899999996 677665 579999999999988877764 55678899999999888
Q ss_pred EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce---------------------eEEEEecC
Q psy17682 275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE---------------------RQYSLRAP 333 (490)
Q Consensus 275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~---------------------~~i~iwd~ 333 (490)
++ ++.|++||+.+++....+..+... ..+.|+|+|..++........ ..|.+||+
T Consensus 151 ~~--~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 151 GL--GRDLHVMDPEAGTLVEDKPIQSWE--AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EE--SSSEEEEETTTTEEEEEECSTTTT--TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred Ee--CCeEEEEECCCCcEeeeeeccccC--CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 87 689999999999887766643311 122688998866554322111 15789999
Q ss_pred CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-
Q psy17682 334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS- 412 (490)
Q Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~- 412 (490)
.+.+.. ......+...+..++|+|+|++++++ ++.|++||+.+++ .+..+..+..+.+++|+|++.+++++
T Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 227 ETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNA----SIKRVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp TTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTE----EEEEEECSSCCCEEEECTTSCEEEEES
T ss_pred CCCCce-EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCc----CcceecCCCceeeEEECCCCCEEEEEc
Confidence 886543 22222344567889999999998544 7999999998876 33334445578999999999876655
Q ss_pred -cceeEEEEecCCCceEEE
Q psy17682 413 -CEIGRFFRLNNSGLCQVV 430 (490)
Q Consensus 413 -~~~~~~~~~~~~~~~~~i 430 (490)
++.+.+|++.+++.+..+
T Consensus 299 ~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 299 ALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp BSSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEECcCCcEEEEE
Confidence 347889999888744433
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=4.4e-22 Score=183.30 Aligned_cols=255 Identities=13% Similarity=0.090 Sum_probs=177.7
Q ss_pred eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceeee
Q psy17682 133 LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDL 211 (490)
Q Consensus 133 ~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~ 211 (490)
.+.++.|.+|++. .+ ....+..|...|.+++|+|++ .+|++++ ++.|++||+.+ ++.....
T Consensus 18 ~~~~~~i~~~d~~-----~~----~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~------- 79 (297)
T 2ojh_A 18 GSMRSSIEIFNIR-----TR----KMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVD------- 79 (297)
T ss_dssp CCCCEEEEEEETT-----TT----EEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECC-------
T ss_pred CCcceeEEEEeCC-----CC----ceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEec-------
Confidence 4678899999985 22 233456789999999999998 7888876 78999999988 6654332
Q ss_pred ccc-ccCEEEEEEeeCCCCEEEEEeC--CCcEEE--EECCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCeEEEE
Q psy17682 212 LYH-QRRVGLVLWHPTAQNVLLTAGS--DNNVAI--WNVGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKKMRII 285 (490)
Q Consensus 212 ~~~-~~~v~~~~~~p~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw 285 (490)
..+ ...+.+++|+|+++ .|++++. ++...| +++.+++ ...+..+ ..+..++|+|+++.|+ +++.++.+++|
T Consensus 80 ~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 80 TGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp CTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred cccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEE
Confidence 123 46788999999996 7888873 344455 4555554 3445433 4589999999999877 77789999999
Q ss_pred eCC--CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682 286 NPR--TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV 363 (490)
Q Consensus 286 d~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 363 (490)
+++ +++ ...+..+.. .+..+.|+|+|+.++.++. .++.+++|+++...... .....+...+..++|+|+|++|
T Consensus 157 ~~~~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l 231 (297)
T 2ojh_A 157 SMDIDSGV-ETRLTHGEG-RNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVDGSSV-ERITDSAYGDWFPHPSPSGDKV 231 (297)
T ss_dssp EEETTTCC-EEECCCSSS-CEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCE-EECCCCSEEEEEEEECTTSSEE
T ss_pred EEECCCCc-ceEcccCCC-ccccceECCCCCEEEEEec--CCCCccEEEECCCCCCc-EEEecCCcccCCeEECCCCCEE
Confidence 854 333 334444444 4899999999998876653 25667777765322222 2222344568889999999998
Q ss_pred EEEecC----------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682 364 YLCGKG----------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE 414 (490)
Q Consensus 364 ~~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 414 (490)
++++.. ++.|++||+.+++. ........+...+..++|+|++..++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 232 VFVSYDADVFDHPRDLDVRVQLMDMDGGNV-ETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEEEEETTCCSCCSSEEEEEEEEETTSCSC-EEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EEEEcCCCCCcccccCceEEEEEecCCCCc-eeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 554432 26799999988763 222222245568999999999998776643
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=5e-21 Score=181.13 Aligned_cols=281 Identities=12% Similarity=0.145 Sum_probs=184.0
Q ss_pred CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccccccceeeec
Q psy17682 135 SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLL 212 (490)
Q Consensus 135 ~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~ 212 (490)
.++.+.+|.++. ..+++. ......+...+..++|+|+| ++++++.. ++.|.+|++.+++.. . ...+.
T Consensus 14 ~~~~i~v~~~d~---~tg~~~--~~~~~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~-~----~~~~~ 82 (347)
T 3hfq_A 14 TSQGIYQGTLDT---TAKTLT--NDGLLAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAH-K----LNTVV 82 (347)
T ss_dssp SCCEEEEEEEET---TTTEEE--EEEEEEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEE-E----EEEEE
T ss_pred CCCCEEEEEEcC---CCCeEE--EeeeeeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEE-E----eeeee
Confidence 456677877751 122211 11223556778899999998 54444432 689999999665431 1 11233
Q ss_pred ccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-C--eeEEEEecC---------CCcEEEEEEcCCCCEEEEEeCC
Q psy17682 213 YHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-G--EIMIQIECH---------PDIVYSASWNWDGSKLLTTCKD 279 (490)
Q Consensus 213 ~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d 279 (490)
.+...+..++|+|+++ +|++++ .++.|.+|++.. + +.+..+... ...+.+++|+|+|+++++...+
T Consensus 83 ~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred cCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 4667788999999996 666666 689999999963 3 233333311 2248899999999966666678
Q ss_pred CeEEEEeCC-CCceee--eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-EEEec---cC----C
Q psy17682 280 KKMRIINPR-TGAIEE--EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-VMVEL---DT----S 348 (490)
Q Consensus 280 g~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-~~~~~---~~----~ 348 (490)
+.|++||+. +++... .+..+.+..+..++|+|+|+++++... .++.+.+|++....... ..... .. .
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 899999998 454332 223333434788999999996666542 46789999987522111 11111 11 1
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEeeCceeEEeec---ceeEEEEec--
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMPKRGCDVNSC---EIGRFFRLN-- 422 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~-- 422 (490)
..+..++|+|||++|+++...++.|.+|++..... ...+..... ...+.+++|+|||+++++++ +.+.+|+++
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH-LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 34788999999999988888899999999974321 223333333 45688999999998766653 478899665
Q ss_pred CCCceEEEE
Q psy17682 423 NSGLCQVVS 431 (490)
Q Consensus 423 ~~~~~~~i~ 431 (490)
++. +..+.
T Consensus 319 tg~-l~~~~ 326 (347)
T 3hfq_A 319 SGK-LSLLQ 326 (347)
T ss_dssp TCC-EEEEE
T ss_pred CCe-EEecc
Confidence 455 55443
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4.7e-21 Score=200.27 Aligned_cols=282 Identities=11% Similarity=0.100 Sum_probs=196.9
Q ss_pred ccCCeeEeccccccceEEEEEeeCC-Cc-----eEEEECCCCCCCCcccCCCCcceeeccc-------------------
Q psy17682 111 STANEITISEDYVKEFKEEIRKLKS-QQ-----ALSILPPPSTAPNTGRINADHALVGGHK------------------- 165 (490)
Q Consensus 111 ~~v~~~~~s~~~~~~~~~~~~~~~~-~g-----~i~v~~~~~~~~~~~~~~~~~~~~~~h~------------------- 165 (490)
..+..++|||++ + .++.+.. ++ .|.+|++. .++ ....+..|.
T Consensus 37 ~~~~~~~~SpdG--~---~la~~~~~d~~~~~~~i~~~d~~-----~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (741)
T 2ecf_A 37 PTLMKPKVAPDG--S---RVTFLRGKDSDRNQLDLWSYDIG-----SGQ---TRLLVDSKVVLPGTETLSDEEKARRERQ 103 (741)
T ss_dssp CCCEEEEECTTS--S---EEEEEECCSSCTTEEEEEEEETT-----TCC---EEEEECGGGTC-----------------
T ss_pred CCCCCceEecCC--C---EEEEEeccCCCCcccEEEEEECC-----CCc---eeEccchhhcccccccccchhhhhhhhh
Confidence 357899999996 2 3344444 66 89999985 222 122333332
Q ss_pred -----CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC--cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682 166 -----GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG--ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN 238 (490)
Q Consensus 166 -----~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 238 (490)
..|.+++|+||| ++|++++. +.|++||+.++. .... +..|...+.+++|+|+|+ .|+.++ ++
T Consensus 104 ~~~~~~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~-------l~~~~~~~~~~~~SPDG~-~la~~~-~~ 172 (741)
T 2ecf_A 104 RIAAMTGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQ-------LTHGEGFATDAKLSPKGG-FVSFIR-GR 172 (741)
T ss_dssp ---CCEESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCB-------CCCSSSCEEEEEECTTSS-EEEEEE-TT
T ss_pred hhccccCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEE-------cccCCcccccccCCCCCC-EEEEEe-CC
Confidence 238899999999 78888876 899999998872 2222 334778899999999996 777776 46
Q ss_pred cEEEEECCCCeeEEEEecCCCc----------------EEEEEEcCCCCEEEEEeCCC----------------------
Q psy17682 239 NVAIWNVGTGEIMIQIECHPDI----------------VYSASWNWDGSKLLTTCKDK---------------------- 280 (490)
Q Consensus 239 ~v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg---------------------- 280 (490)
.|++||+.+++.......+... +..++|+|||++|++++.|+
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 8999999988766544433332 47799999999999988765
Q ss_pred -----------eEEEEeCCC-Cceeeeeee--cCCCceeEEEEeCCCcEEEEEeC--CCceeEEEEecCCCCCCCeEEEe
Q psy17682 281 -----------KMRIINPRT-GAIEEEAVC--HEGSKATRAIYLKSGLIFTTGFS--KMSERQYSLRAPDHLDEPIVMVE 344 (490)
Q Consensus 281 -----------~i~iwd~~~-~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~~~--~~~~~~i~iwd~~~~~~~~~~~~ 344 (490)
.|++||+.+ ++....... +.. .+..++| |||+.|+++.. ...+..|.+||+.++........
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDI-YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSE-EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcce-EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 899999998 775543322 333 4889999 99998887652 22478899999998764333322
Q ss_pred ccCCC---ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEe-ec-c---e
Q psy17682 345 LDTSN---GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVN-SC-E---I 415 (490)
Q Consensus 345 ~~~~~---~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~-~~-~---~ 415 (490)
.... .+..++|+|||+++ ++++.||.++||.+..... ...+. .+...+..+ +|+|++..++. +. + .
T Consensus 331 -~~~~~~~~~~~~~~spdg~~~-~~~~~~g~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~ 405 (741)
T 2ecf_A 331 -TSPTWVPLHNSLRFLDDGSIL-WSSERTGFQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEKAGLAYFRAGIESARE 405 (741)
T ss_dssp -ECSSCCCCCSCCEECTTSCEE-EEECTTSSCEEEEECSSSC-EEESC--CSSSCEEEEEEEETTTTEEEEEECSSCTTC
T ss_pred -CCCCcCCcCCceEECCCCeEE-EEecCCCccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCCCCEEEEEEeCCCCce
Confidence 2212 35689999999965 7788899888888874322 33332 234567777 69999976543 32 2 6
Q ss_pred eEEEEecC
Q psy17682 416 GRFFRLNN 423 (490)
Q Consensus 416 ~~~~~~~~ 423 (490)
.++|.+..
T Consensus 406 ~~l~~~~~ 413 (741)
T 2ecf_A 406 SQIYAVPL 413 (741)
T ss_dssp BEEEEEET
T ss_pred EEEEEEEc
Confidence 78999864
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.3e-21 Score=203.81 Aligned_cols=288 Identities=13% Similarity=0.079 Sum_probs=196.9
Q ss_pred cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC---CeeEEEECCCCCCEEEEEeCC-
Q psy17682 112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG---PVLDIAWSPHDDNVIASGSED- 187 (490)
Q Consensus 112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~~~d- 187 (490)
....++|+|++. .++ .+.+|.+.+|+.. .++ ....+.+|.. .|.+++|+||| ++|++++.+
T Consensus 18 ~~~~~~~spdg~-----~~~-~~~dg~i~~~d~~-----~g~---~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWISDTE-----FIY-REQKGTVRLWNVE-----TNT---STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSSSSC-----BCC-CCSSSCEEEBCGG-----GCC---CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCC
T ss_pred cccccEEcCCCc-----EEE-EeCCCCEEEEECC-----CCc---EEEEeccccccccccceEEECCCC-CEEEEEecCc
Confidence 367889999962 222 3678899999985 222 3345556654 49999999998 788888764
Q ss_pred --------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682 188 --------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD 259 (490)
Q Consensus 188 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 259 (490)
+.|.+||+.+++. ..+.. ..+|...+..++|+|+|+ .|+.++. +.|++||+.+++.......+..
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~----~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP-QSLDP----PEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC-EECCC----TTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSCCEEEECCCBT
T ss_pred cceeecceeeEEEEECCCCce-EeccC----CccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCceEEEecCCCC
Confidence 7888999988875 22221 233555688999999996 6777765 7999999998887665554333
Q ss_pred cE------------------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeC
Q psy17682 260 IV------------------YSASWNWDGSKLLTTCKDK----------------------------------KMRIINP 287 (490)
Q Consensus 260 ~v------------------~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~ 287 (490)
.+ .+++|+|||+.|++++.++ .|++||+
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence 33 7899999999999987553 7999999
Q ss_pred CCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeCC-CceeEEEEecCCCCCCCeEEEeccCCCce----eeeeec
Q psy17682 288 RTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDEPIVMVELDTSNGV----MFPLYD 357 (490)
Q Consensus 288 ~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~i----~~~~~s 357 (490)
.+++....+..+. ...+..++|+|||+++++.... ..+..|++||+.+++....... .+...+ ..++|+
T Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~s 314 (723)
T 1xfd_A 236 NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFS 314 (723)
T ss_dssp SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEEC
T ss_pred CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEc
Confidence 9887655555431 2347889999999988766432 2467899999988664332222 222223 378999
Q ss_pred CCCCeEEEE-ecCCC------eEEEEEecCCCCe--eEEeeeeeCCCceee-EEEeeCceeEEee-c----ceeEEEEec
Q psy17682 358 PDTNLVYLC-GKGDS------VIRYFEITAEPPF--VHYINTFQTPDPQRG-IGMMPKRGCDVNS-C----EIGRFFRLN 422 (490)
Q Consensus 358 ~~~~~l~~~-g~~dg------~i~iwd~~~~~~~--~~~~~~~~~~~~i~~-~~~sp~~~~l~~~-~----~~~~~~~~~ 422 (490)
|||+.|++. +..++ .|++||+..+... ...+. .+...+.. ++|+|||+.++.. . ...++|.+.
T Consensus 315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 999988665 55677 4666663233210 11221 12234444 6999999877643 2 457899986
Q ss_pred CC
Q psy17682 423 NS 424 (490)
Q Consensus 423 ~~ 424 (490)
..
T Consensus 393 ~~ 394 (723)
T 1xfd_A 393 TV 394 (723)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=1.6e-21 Score=197.96 Aligned_cols=230 Identities=13% Similarity=0.064 Sum_probs=160.6
Q ss_pred CCeeEEEECCCCCCEEEEEeC---CCcEEEEECCC--CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSE---DCVVKVWQIPD--GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV 240 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v 240 (490)
..|.+++|+|+ .++++++. +...++|.+.. ......+. ....+...+|+|+++.++++.+.++.+
T Consensus 65 ~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~--------~~~~~~~~~~s~dg~~~~~~s~~~~~~ 134 (582)
T 3o4h_A 65 NSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLE--------AVKPMRILSGVDTGEAVVFTGATEDRV 134 (582)
T ss_dssp SEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECT--------TSCSBEEEEEEECSSCEEEEEECSSCE
T ss_pred cccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCcccccc--------CCCCceeeeeCCCCCeEEEEecCCCCc
Confidence 57889999996 57777765 45567766543 22111211 122344678999987666666666667
Q ss_pred EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682 241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF 316 (490)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 316 (490)
.+||+.+++.......+. .+++|+|||++|++++.+ +.|++||+.+++.. .+..+.+. +..++|+|||+.|
T Consensus 135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~-~~~~~~SpDG~~l 209 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGS-FSSASISPGMKVT 209 (582)
T ss_dssp EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCE-EEEEEECTTSCEE
T ss_pred eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCc-cccceECCCCCEE
Confidence 799999887665554333 789999999999988877 78999999988764 45555554 7999999999999
Q ss_pred EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee--------ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe
Q psy17682 317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL--------YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388 (490)
Q Consensus 317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~--------~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~ 388 (490)
+++..+ ....|++||+.+++.. ....+...+..++ |+||| .++++++.|+.+++|++ ++ ..
T Consensus 210 ~~~~~~-~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~----~~ 278 (582)
T 3o4h_A 210 AGLETA-REARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GE----RV 278 (582)
T ss_dssp EEEECS-SCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TE----EE
T ss_pred EEccCC-CeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CC----ee
Confidence 966521 1238999999876532 2234445566777 99999 55588899999999999 53 22
Q ss_pred eeeeCCCceeeEEEeeCceeEEeecc---eeEEEEecCC
Q psy17682 389 NTFQTPDPQRGIGMMPKRGCDVNSCE---IGRFFRLNNS 424 (490)
Q Consensus 389 ~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~~~~~~~~ 424 (490)
. .....+.+++|+ ++.++++.+. ..++|.++..
T Consensus 279 ~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 279 E--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp C--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred c--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 2 122578899999 9988776543 2456665543
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=8.8e-21 Score=197.06 Aligned_cols=290 Identities=13% Similarity=0.073 Sum_probs=196.2
Q ss_pred ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK 124 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 124 (490)
..|.+++|+|+ ..++++ .|+.|++||+.++.. ...... ...+..++|||++
T Consensus 82 ~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~~~~------------------~~l~~~------~~~~~~~~~SpdG-- 132 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF--TQGGLVGFDMLARKV------------------TYLFDT------NEETASLDFSPVG-- 132 (706)
T ss_dssp CCCEEEEETTT-TEEEEE--ETTEEEEEETTTTEE------------------EEEECC------TTCCTTCEECTTS--
T ss_pred cCceeEEECCC-CeEEEE--ECCEEEEEECCCCce------------------EEccCC------cccccCCcCCCCC--
Confidence 56999999999 466665 359999999987541 000111 1246789999996
Q ss_pred ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC--------------CeeEEEECCCCCCEEEEEe-----
Q psy17682 125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG--------------PVLDIAWSPHDDNVIASGS----- 185 (490)
Q Consensus 125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~--------------~V~~~~~~p~~~~~l~s~~----- 185 (490)
+.+. . ..++.|.+|++.......++ ..+....+.. .+.+++|+||| ++|++++
T Consensus 133 ~~la---~-~~~~~i~v~~~~~~~~~~g~---~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~ 204 (706)
T 2z3z_A 133 DRVA---Y-VRNHNLYIARGGKLGEGMSR---AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSM 204 (706)
T ss_dssp SEEE---E-EETTEEEEEECBCTTSCCCC---CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTT
T ss_pred CEEE---E-EECCeEEEEecCcccccCCC---cEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCC
Confidence 2222 2 25689999998620000011 1111222222 25899999999 7888876
Q ss_pred ----------------------------CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 186 ----------------------------EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 186 ----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
.+..|.+||+.+++...... ...|...+.+++|+|+++ .|++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~spdg~-~l~~~~~~ 278 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-----GEPKEKFLTNLSWSPDEN-ILYVAEVN 278 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-----CSCTTCEEEEEEECTTSS-EEEEEEEC
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-----CCCCceeEeeEEEECCCC-EEEEEEeC
Confidence 45689999998776433211 123667899999999996 77777666
Q ss_pred C-----cEEEEECCCCeeEEEEe--cCCC---cEEEEEEcC--CCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCce
Q psy17682 238 N-----NVAIWNVGTGEIMIQIE--CHPD---IVYSASWNW--DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKA 304 (490)
Q Consensus 238 g-----~v~iwd~~~~~~~~~~~--~~~~---~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~ 304 (490)
+ .|.+||+.+++....+. .+.. .+..++|+| +|+++++++.|+.++||++. ++..+..+..+... +
T Consensus 279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~-v 357 (706)
T 2z3z_A 279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE-V 357 (706)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC-E
T ss_pred CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE-E
Confidence 5 89999999984333332 2222 246789999 99999999999999999876 56666666655543 5
Q ss_pred eE-EEEeCCCcEEEEEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC---CeEEEEEe
Q psy17682 305 TR-AIYLKSGLIFTTGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD---SVIRYFEI 378 (490)
Q Consensus 305 ~~-~~~s~~~~~l~~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d---g~i~iwd~ 378 (490)
.. ++|+|+|+.|+.++.+.. ...|..||+.++. ...+.+...+..++|+|||++++++++.+ +.|++||+
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK----TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC----CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC----ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 54 799999987766553211 2478888887654 12234556789999999999986655444 57999999
Q ss_pred cCCC
Q psy17682 379 TAEP 382 (490)
Q Consensus 379 ~~~~ 382 (490)
.+++
T Consensus 434 ~~~~ 437 (706)
T 2z3z_A 434 GKGS 437 (706)
T ss_dssp SSCE
T ss_pred CCCe
Confidence 8775
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.4e-20 Score=178.25 Aligned_cols=247 Identities=8% Similarity=0.013 Sum_probs=184.9
Q ss_pred cccCCeeEEEECCCCCCEEEEEeC-------CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSE-------DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG 235 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 235 (490)
.....+..++|+|++ +++++++. ++.|.+||..+++....+. ....+..++|+|+++.++++..
T Consensus 38 ~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--------NDLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp EEESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--------ESSCCCSEEEETTTTEEEEEET
T ss_pred hhccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--------cCCCcceEEECCCCCEEEEEec
Confidence 345678899999998 56666653 5689999999887766543 2345778999999975666666
Q ss_pred CCCcEEEEECCCCeeEEEEecCCC---------cEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCce
Q psy17682 236 SDNNVAIWNVGTGEIMIQIECHPD---------IVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKA 304 (490)
Q Consensus 236 ~dg~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~ 304 (490)
.++.|.+||+.+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++....+..+.. .+
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~ 187 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-MS 187 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-TC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-cc
Confidence 689999999999998888875432 278999999999887776 478899999999988877763433 37
Q ss_pred eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 305 TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 305 ~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..++|+|+|+.++++. .++.+.+||..+.+........ .+...+..++|+|+|++++++...++.|.+||..+++
T Consensus 188 ~~~~~s~dg~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTN---ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCCEEETTTTEEEEEC---TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred ceEEECCCCCEEEEEc---CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 8899999999888887 5789999999876533222211 1234577899999999998877777999999999887
Q ss_pred CeeEEeeeeeCCCceeeEEEeeCceeEE-ee--cceeEEEEecCCCce
Q psy17682 383 PFVHYINTFQTPDPQRGIGMMPKRGCDV-NS--CEIGRFFRLNNSGLC 427 (490)
Q Consensus 383 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~--~~~~~~~~~~~~~~~ 427 (490)
. +..+..+.+ .+++|+|++..++ +. ++.+.+|++.+++.+
T Consensus 265 ~----~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 265 I----LAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp E----EEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred E----EEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 2 222333333 6799999997544 33 357788888777633
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=3.5e-20 Score=175.27 Aligned_cols=212 Identities=11% Similarity=0.058 Sum_probs=143.3
Q ss_pred cccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceeeec-------ccccCEEEEEEeeCCCCEEEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVDLL-------YHQRRVGLVLWHPTAQNVLLTA 234 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~l~s~ 234 (490)
.|...+..++|+|+| ++|++++ .++.|.+|++........+.. .... .+...+.+++|+|+++ ++++.
T Consensus 83 ~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 83 APGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDT--VQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp EESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEE--EECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred cCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecce--eecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 455678899999998 6677666 789999999964322222111 0001 1223588999999997 78877
Q ss_pred eCCCcEEEEECC-CCeeEE--EEec-CCCcEEEEEEcCCCCEEEE-EeCCCeEEEEeCCC--Cce--eeeeeecCC----
Q psy17682 235 GSDNNVAIWNVG-TGEIMI--QIEC-HPDIVYSASWNWDGSKLLT-TCKDKKMRIINPRT--GAI--EEEAVCHEG---- 301 (490)
Q Consensus 235 ~~dg~v~iwd~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~---- 301 (490)
..++.|.+|++. +++... .+.. ....+..++|+|+|+++++ ...++.+.+|++.. ++. ...+.....
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 778999999998 554322 2222 2346788999999996665 45688999999874 432 222221111
Q ss_pred -CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682 302 -SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT 379 (490)
Q Consensus 302 -~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~ 379 (490)
..+..++|+|+|++|+++.. .++.|.+|++............. +...+..++|+|||++|++++..++.|.+|++.
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 23788999999997754431 47889999987432222232222 234578999999999997777777999999665
Q ss_pred C
Q psy17682 380 A 380 (490)
Q Consensus 380 ~ 380 (490)
.
T Consensus 317 ~ 317 (347)
T 3hfq_A 317 L 317 (347)
T ss_dssp T
T ss_pred C
Confidence 3
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.5e-19 Score=171.98 Aligned_cols=233 Identities=9% Similarity=0.021 Sum_probs=148.6
Q ss_pred ccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceee-------ecccccCEEEEEEeeCCCCEEEEEe
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVD-------LLYHQRRVGLVLWHPTAQNVLLTAG 235 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~p~~~~~l~s~~ 235 (490)
+......+++ ++ .+|++++ .++.|.+|++.....+..+...... ...+...+.+++|+|+++.++++..
T Consensus 98 ~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 174 (361)
T 3scy_A 98 MGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL 174 (361)
T ss_dssp SSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET
T ss_pred CCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC
Confidence 3345666777 56 5555554 6889999999765443322110000 0112334688999999964455555
Q ss_pred CCCcEEEEECCCCee------E------EE-EecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcee--eeeeec
Q psy17682 236 SDNNVAIWNVGTGEI------M------IQ-IECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIE--EEAVCH 299 (490)
Q Consensus 236 ~dg~v~iwd~~~~~~------~------~~-~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~ 299 (490)
.++.|.+|++..... + .. ...+...+..++|+|+|+++++++ .++.|.+||+.+++.. ..+...
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 588999998875431 1 11 223456688999999999887777 6899999999877542 222211
Q ss_pred C--CCceeEEEEeCCCcEEEEEeCCCc-eeEEEEecCCCC-CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682 300 E--GSKATRAIYLKSGLIFTTGFSKMS-ERQYSLRAPDHL-DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY 375 (490)
Q Consensus 300 ~--~~~~~~~~~s~~~~~l~~~~~~~~-~~~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i 375 (490)
. ......++|+|+|++|+++.. . ++.|.+|++... ..............+..++|+|+|++|++++..++.|.+
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v 332 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQI 332 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEE
T ss_pred CCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEE
Confidence 1 123679999999998876652 2 478999998632 222222222334467889999999999777768899999
Q ss_pred EEec--CCCCeeEEeeeeeCCCceeeEEEe
Q psy17682 376 FEIT--AEPPFVHYINTFQTPDPQRGIGMM 403 (490)
Q Consensus 376 wd~~--~~~~~~~~~~~~~~~~~i~~~~~s 403 (490)
|++. +++ ...+........+.++.|.
T Consensus 333 ~~~d~~~g~--~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 333 FERDQATGL--LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEECTTTCC--EEECSCCEECSSEEEEEEE
T ss_pred EEEECCCCc--EeecceeeeCCCCeEEEEc
Confidence 8765 443 2222211122357778775
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=4.2e-20 Score=173.64 Aligned_cols=268 Identities=8% Similarity=0.041 Sum_probs=187.5
Q ss_pred ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc-cCCeeEeccccccceEEEEEeeCCC
Q psy17682 58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS-TANEITISEDYVKEFKEEIRKLKSQ 136 (490)
Q Consensus 58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~ 136 (490)
.+|++++.++.|.+||+.+++. ...+.... .. .+..++|+|+.. .++++...+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~------------------~~~~~~~~----~~~~~~~~~~s~dg~----~l~v~~~~~ 55 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV------------------DKVITIAD----AGPTPMVPMVAPGGR----IAYATVNKS 55 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE------------------EEEEECTT----CTTCCCCEEECTTSS----EEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcE------------------EEEEEcCC----CCCCccceEEcCCCC----EEEEEeCCC
Confidence 5789999999999999987541 11111000 00 256789999852 234556778
Q ss_pred ceEEEECCCCCCCCcccCCCCcceee-c----ccCCeeEEEECCCCCCEEEEEe------------CCCcEEEEECCCCC
Q psy17682 137 QALSILPPPSTAPNTGRINADHALVG-G----HKGPVLDIAWSPHDDNVIASGS------------EDCVVKVWQIPDGG 199 (490)
Q Consensus 137 g~i~v~~~~~~~~~~~~~~~~~~~~~-~----h~~~V~~~~~~p~~~~~l~s~~------------~dg~i~iwd~~~~~ 199 (490)
+.|.+|++. .++ ....+. + |...+.+++|+|+| .++++++ .++.|.+||+.+++
T Consensus 56 ~~v~~~d~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 56 ESLVKIDLV-----TGE---TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp TEEEEEETT-----TCC---EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred CeEEEEECC-----CCC---eEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc
Confidence 899999985 222 122222 1 23367899999998 6777775 57999999998776
Q ss_pred cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD 279 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 279 (490)
....+. ....+.+++|+|+++ .++++ ++.|.+||+.+++.+..+..+.. ...+.|+|+++.++..+..
T Consensus 127 ~~~~~~--------~~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 127 RRKAFE--------APRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEEEEE--------CCSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTT
T ss_pred EEEEEe--------CCCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccC
Confidence 554332 234578899999996 55555 68899999999998877764331 1133789998866554432
Q ss_pred -C-----------------------eEEEEeCCCCceeee-eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682 280 -K-----------------------KMRIINPRTGAIEEE-AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 280 -g-----------------------~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~ 334 (490)
+ .|.+||+.+++.... +..+.. .+..++|+|+|++++++ ++.|.+||+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-----~~~v~~~d~~ 268 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV-FYFSTAVNPAKTRAFGA-----YNVLESFDLE 268 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS-CEEEEEECTTSSEEEEE-----ESEEEEEETT
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC-ceeeEEECCCCCEEEEe-----CCeEEEEECC
Confidence 2 478999999887521 223333 47889999999998877 5789999998
Q ss_pred CCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+.+.. ........+..++|+|+|++|++ ++.++.|++||+.+++
T Consensus 269 ~~~~~---~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 269 KNASI---KRVPLPHSYYSVNVSTDGSTVWL-GGALGDLAAYDAETLE 312 (337)
T ss_dssp TTEEE---EEEECSSCCCEEEECTTSCEEEE-ESBSSEEEEEETTTCC
T ss_pred CCcCc---ceecCCCceeeEEECCCCCEEEE-EcCCCcEEEEECcCCc
Confidence 75432 22233456789999999999855 5779999999999987
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=3.7e-21 Score=186.94 Aligned_cols=209 Identities=12% Similarity=0.070 Sum_probs=154.5
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc--------cccccceeeecccccCEEEEEEeeCCCCEEE----
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS--------RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL---- 232 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~---- 232 (490)
...++.+++++++ .++++++.|+ +++|+....... ............+...|.+++|+|++. +|+
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEe
Confidence 4468899999987 7899999887 899875321100 000000001123567899999999996 777
Q ss_pred EEeCCCcEEEEECCCC--------ee---EEEEecCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecC
Q psy17682 233 TAGSDNNVAIWNVGTG--------EI---MIQIECHPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHE 300 (490)
Q Consensus 233 s~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 300 (490)
+|+.|+.|++||++++ +. +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++........|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7888999999998654 22 3445578999999999997 7899999999999999999987665566666
Q ss_pred CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-----cCCCceeeeeecCCCCeEEEEecCCCe---
Q psy17682 301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-----DTSNGVMFPLYDPDTNLVYLCGKGDSV--- 372 (490)
Q Consensus 301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~g~~dg~--- 372 (490)
.. +.+++|+|+|++|++|+ .|+.|++||.+ +.....+... .|...+.++.|++++.++++..+.||.
T Consensus 193 ~~-v~~v~wspdg~~lasgs---~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 193 VA-VTSVCWSPKGKQLAVGK---QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp GC-EEEEEECTTSSCEEEEE---TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred Cc-eeEEEEcCCCCEEEEEc---CCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 54 99999999999999998 68999999998 3321111111 112368999999999888666656643
Q ss_pred ---EEEEEecCC
Q psy17682 373 ---IRYFEITAE 381 (490)
Q Consensus 373 ---i~iwd~~~~ 381 (490)
+++|++...
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 899999865
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=2e-19 Score=171.04 Aligned_cols=273 Identities=13% Similarity=0.060 Sum_probs=177.1
Q ss_pred CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC----CcEEEEECCCC-Ccccccccce
Q psy17682 134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED----CVVKVWQIPDG-GISRTLTEPV 208 (490)
Q Consensus 134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~-~~~~~~~~~~ 208 (490)
+.++.|.+|.++. ..+++. ..... |...+..++|+|+| ++|++++.+ +.|.+|++... .....+
T Consensus 24 ~~~~~i~~~~~d~---~~g~~~-~~~~~--~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~---- 92 (361)
T 3scy_A 24 GNSKGIYTFRFNE---ETGESL-PLSDA--EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL---- 92 (361)
T ss_dssp SSCCEEEEEEEET---TTCCEE-EEEEE--ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEE----
T ss_pred CCCCCEEEEEEeC---CCCCEE-Eeecc--cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEe----
Confidence 4567888887752 112211 12222 77888899999998 788888775 79999998653 222211
Q ss_pred eeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEE----EEe--c--------CCCcEEEEEEcCCCCEE
Q psy17682 209 VDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMI----QIE--C--------HPDIVYSASWNWDGSKL 273 (490)
Q Consensus 209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~----~~~--~--------~~~~v~~~~~~~~~~~l 273 (490)
.....+......+++ +++ +|++++ .++.|.+|++.....+. .+. + +...+.+++|+|+|+++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eEeccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 122334556777777 665 555554 68899999997543221 111 1 12345889999999977
Q ss_pred EEEe-CCCeEEEEeCCCCce------e------eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682 274 LTTC-KDKKMRIINPRTGAI------E------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340 (490)
Q Consensus 274 ~~~~-~dg~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~ 340 (490)
++++ .++.|++|++..... + .......+..+..++|+|+|++++++.. .++.|.+|++.++.. .
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~-~ 246 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGML-D 246 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEE-E
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCce-E
Confidence 6655 478999998875431 1 1222233334789999999997776653 478899999985432 1
Q ss_pred EEEec----cCCCceeeeeecCCCCeEEEEecC-CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--
Q psy17682 341 VMVEL----DTSNGVMFPLYDPDTNLVYLCGKG-DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-- 413 (490)
Q Consensus 341 ~~~~~----~~~~~i~~~~~s~~~~~l~~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-- 413 (490)
..... .+......++|+|||++|+++... ++.|.+|++.........+........+.+++|+|+|+++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 11111 122446799999999999777766 78999999973211223333334355788999999998776663
Q ss_pred -ceeEEEEecC
Q psy17682 414 -EIGRFFRLNN 423 (490)
Q Consensus 414 -~~~~~~~~~~ 423 (490)
+.+.+|.++.
T Consensus 327 ~~~v~v~~~d~ 337 (361)
T 3scy_A 327 TNVIQIFERDQ 337 (361)
T ss_dssp TTEEEEEEECT
T ss_pred CCCEEEEEEEC
Confidence 4678877663
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.4e-20 Score=193.06 Aligned_cols=336 Identities=11% Similarity=0.086 Sum_probs=209.2
Q ss_pred eEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEE
Q psy17682 49 LVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKE 128 (490)
Q Consensus 49 ~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 128 (490)
.+.|+|++ .+++++ .|++|++||+.++.... .. .+. ......+..++|||++ +.+.
T Consensus 20 ~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~----------------~~--~~~--~~~~~~~~~~~~SpDg--~~la 75 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYT----------------IL--SNR--TMKSVNASNYGLSPDR--QFVY 75 (719)
T ss_dssp CCEESSSS-EEEEEC-TTSCEEEEESSSCCEEE----------------EE--CHH--HHHTTTCSEEEECTTS--SEEE
T ss_pred ccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEE----------------EE--ccc--cccccceeeEEECCCC--CeEE
Confidence 77999999 666655 58999999998875211 00 000 0001137899999996 3332
Q ss_pred EEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682 129 EIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR 202 (490)
Q Consensus 129 ~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 202 (490)
..... +.++.+.+|++. .++.... ..+ ...+..++|+||| +.|+.+. |+.|++|++.+++...
T Consensus 76 ~~~~~~~~~~~s~~~~i~~~d~~-----~g~~~~~-~~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 76 LESDYSKLWRYSYTATYYIYDLS-----NGEFVRG-NEL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EEEEEEECSSSCEEEEEEEEETT-----TTEECCS-SCC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEE
T ss_pred EEecCceeEEeecceEEEEEECC-----CCccccc-eec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEE
Confidence 22211 126899999985 2222000 111 2568899999999 6777775 7899999998877643
Q ss_pred ccccc--eeeeccccc---------CEEEEEEeeCCCCEEEEEeCCC---------------------------------
Q psy17682 203 TLTEP--VVDLLYHQR---------RVGLVLWHPTAQNVLLTAGSDN--------------------------------- 238 (490)
Q Consensus 203 ~~~~~--~~~~~~~~~---------~v~~~~~~p~~~~~l~s~~~dg--------------------------------- 238 (490)
..... ...+.++.. ...+++|+|+|+ .|++++.|.
T Consensus 145 l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 145 ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 21110 001112211 124899999996 787776542
Q ss_pred -cEEEEECCCCeeE--EE------EecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEe----CCCCceeeee----e
Q psy17682 239 -NVAIWNVGTGEIM--IQ------IECHPDIVYSASWNWDGSKLLTTCKD----KKMRIIN----PRTGAIEEEA----V 297 (490)
Q Consensus 239 -~v~iwd~~~~~~~--~~------~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~----~ 297 (490)
.|++||+.+++.. .. +.+|...+..++|+||++++++.... ..|++|| +.+++....+ .
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~ 303 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE 303 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccc
Confidence 7889999887642 12 23577789999999998777664432 2489999 8777665544 2
Q ss_pred ecCCCcee-----EEEEeCCCcEEEE-EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--
Q psy17682 298 CHEGSKAT-----RAIYLKSGLIFTT-GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG-- 369 (490)
Q Consensus 298 ~~~~~~~~-----~~~~s~~~~~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~-- 369 (490)
.+... +. .+.|+|+|+.++. .++......|.+||+.+.. ...+ ..+...+..+.++ +++.|++++..
T Consensus 304 ~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l--t~~~~~v~~~~~~-d~~~i~~~~~~~~ 378 (719)
T 1z68_A 304 SRTGW-AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI--TSGKWEAINIFRV-TQDSLFYSSNEFE 378 (719)
T ss_dssp CSSSC-SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC--SCSSSCEEEEEEE-CSSEEEEEESCGG
T ss_pred cCCce-EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec--ccCceEEEEEEEE-eCCEEEEEEecCC
Confidence 44443 44 7889999985544 3322235678999987654 2211 1333457777777 88888777765
Q ss_pred --CCeEEEEEecC--CCCeeEEeee-ee-CCCceeeEEEeeCceeEEeecc-----eeEEEEecCCC
Q psy17682 370 --DSVIRYFEITA--EPPFVHYINT-FQ-TPDPQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSG 425 (490)
Q Consensus 370 --dg~i~iwd~~~--~~~~~~~~~~-~~-~~~~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~ 425 (490)
++.+++|.+.. +....+.+.. +. +...+..+.|+|++..++..+. ...+|++.+++
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 58899999875 3211122221 11 2345778999999987664321 34567665555
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=8e-20 Score=175.55 Aligned_cols=243 Identities=11% Similarity=0.078 Sum_probs=156.3
Q ss_pred ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEE--EeeCCCCEEEEE-------
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL--WHPTAQNVLLTA------- 234 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~p~~~~~l~s~------- 234 (490)
|...+..+.|+|+| ..|+.++.++.|++||+.+++...... .+...+.... ++|++. +++..
T Consensus 79 ~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~-------~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~ 149 (388)
T 3pe7_A 79 RGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQ-------VPAEWVGYGTWVANSDCT-KLVGIEIRREDW 149 (388)
T ss_dssp SCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-------CCTTEEEEEEEEECTTSS-EEEEEEEEGGGC
T ss_pred CCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeee-------chhhcccccceeECCCCC-eeccccccCccc
Confidence 44444467899998 789999989999999999887544322 2334443333 478885 55532
Q ss_pred ---------------eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCce
Q psy17682 235 ---------------GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTGAI 292 (490)
Q Consensus 235 ---------------~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~ 292 (490)
..+..|.+||+.+++..... .+...+..++|+| +|+.|+....+ ..|.++|+..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 23467999999988755443 4667789999999 99988887753 3788888876554
Q ss_pred eeeeeecC-CCceeEEEEeCCCcEEEEEeCC-C-ceeEEEEecCCCCCCCeEEEeccCCC----ceeeeeecCCCCeEEE
Q psy17682 293 EEEAVCHE-GSKATRAIYLKSGLIFTTGFSK-M-SERQYSLRAPDHLDEPIVMVELDTSN----GVMFPLYDPDTNLVYL 365 (490)
Q Consensus 293 ~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~-~-~~~~i~iwd~~~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~ 365 (490)
.. +..+. ...+....|+|||+.|+..+.. + ....|++||+.+++.... ....... ....+.|+|||+.|++
T Consensus 229 ~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 229 RK-VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL-TSMPACSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp EE-SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE-EEECCEEEEEECTTSSEEEEEECCC--
T ss_pred EE-eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE-EcCCCceeeeecCCCCeEccCCCccee
Confidence 33 33222 2236788999999977654421 1 134699999998653222 1111100 0223479999999855
Q ss_pred Ee--------cCCCeEEEEEecCCCCeeEEeeeeeCCC-----------ceeeEEEeeCceeEEeec---ceeEEEEec
Q psy17682 366 CG--------KGDSVIRYFEITAEPPFVHYINTFQTPD-----------PQRGIGMMPKRGCDVNSC---EIGRFFRLN 422 (490)
Q Consensus 366 ~g--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------~i~~~~~sp~~~~l~~~~---~~~~~~~~~ 422 (490)
+. ..+..|++||+.+++. ..+. .+.. .+..++|+|||+.++..+ +..++|.+.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~--~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQ--HRVA--RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ----------CCCCEEEEEETTTTEE--EEEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EeeeccccccCCCCEEEEEeccCCce--EEec--cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 43 4567899999988751 2222 2222 478899999998766543 244555543
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=8.7e-20 Score=172.43 Aligned_cols=237 Identities=8% Similarity=0.036 Sum_probs=167.9
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682 170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249 (490)
Q Consensus 170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 249 (490)
++++++++ .++++++.+++|.+||+.+++....+.. +....+..++|+|+++.+++++..++.|.+||+.+++
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYKSCVM------PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEEEEEC------SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEEEEEec------CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 45677766 8999999999999999988876554431 1112577899999996455666678999999999998
Q ss_pred eEEEEecCC------CcEEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCcee---eeeeecCCCceeEEE
Q psy17682 250 IMIQIECHP------DIVYSASWNWDGSKLLTTCKD------------KKMRIINPRTGAIE---EEAVCHEGSKATRAI 308 (490)
Q Consensus 250 ~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~---~~~~~~~~~~~~~~~ 308 (490)
.+..+.... ..+..++|+|+|+++++++.+ +.|.+||+.+++.. .....+. .+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~ 154 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--QVYLMR 154 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS--SCCCEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC--ccccee
Confidence 887776322 236789999999999998865 89999999885433 3333322 378899
Q ss_pred EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc------------------------------------------
Q psy17682 309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD------------------------------------------ 346 (490)
Q Consensus 309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~------------------------------------------ 346 (490)
|+|+|+ +++++ .+ |.+||..+++....+....
T Consensus 155 ~s~dg~-l~~~~---~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 155 AADDGS-LYVAG---PD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp ECTTSC-EEEES---SS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred ECCCCc-EEEcc---Cc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 999999 44443 22 9999988755322111000
Q ss_pred ------------------------CCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEE
Q psy17682 347 ------------------------TSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIG 401 (490)
Q Consensus 347 ------------------------~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 401 (490)
....+..++|+| ++++++++ ++.|.+||+.+++ .+..+..+..+.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~----~~~~~~~~~~~~~~~ 301 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK----LIKAANLDHTYYCVA 301 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTE----EEEEEECSSCCCEEE
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCe----EEEEEcCCCCccceE
Confidence 001345667889 99998544 8899999999876 333334445678999
Q ss_pred EeeCceeEEee--cceeEEEEecCCCceE
Q psy17682 402 MMPKRGCDVNS--CEIGRFFRLNNSGLCQ 428 (490)
Q Consensus 402 ~sp~~~~l~~~--~~~~~~~~~~~~~~~~ 428 (490)
|+|++..++++ ++.+.+|++.+.+.+.
T Consensus 302 ~s~dg~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 302 FDKKGDKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp ECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEecCCCeEEEEeccccceee
Confidence 99998766655 3478889988776333
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=2.4e-19 Score=169.34 Aligned_cols=201 Identities=9% Similarity=0.006 Sum_probs=142.3
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---------
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--------- 237 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--------- 237 (490)
.+..++|+|++..+++++..++.|.+||+.+++....+..+.. -..+...+.+++|+|+++ ++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV-PGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYV 121 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS-TTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc-cccccccccceEECCCCC-EEEEEcccccccccccc
Confidence 4568899999844556667789999999988876544321000 000023477899999996 77777654
Q ss_pred ---CcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-----------
Q psy17682 238 ---NNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE----------- 300 (490)
Q Consensus 238 ---g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------- 300 (490)
+.|.+||+.+++ .+..+. +...+.+++|+|+|+ +++++ +.|++||+.+++....+..+.
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred cCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccc
Confidence 899999998743 334444 344688999999999 55554 449999999888766554221
Q ss_pred --------------------------------------------------------CCceeEEEEeC-CCcEEEEEeCCC
Q psy17682 301 --------------------------------------------------------GSKATRAIYLK-SGLIFTTGFSKM 323 (490)
Q Consensus 301 --------------------------------------------------------~~~~~~~~~s~-~~~~l~~~~~~~ 323 (490)
+..+..++++| +|++++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---- 273 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---- 273 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE----
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE----
Confidence 00244567789 99988877
Q ss_pred ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
++.|.+||+.+.+. .........+..++|+|+|++|++ ++.++.|++||+.+++
T Consensus 274 -~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKL---IKAANLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTLE 327 (349)
T ss_dssp -ESEEEEEETTTTEE---EEEEECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTTE
T ss_pred -cCeEEEEECccCeE---EEEEcCCCCccceEECCCCCEEEE-ecCCCeEEEEeccccc
Confidence 56899999987542 222233345788999999999955 6778999999998876
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=7.7e-18 Score=175.46 Aligned_cols=329 Identities=12% Similarity=0.043 Sum_probs=198.6
Q ss_pred ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK 124 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 124 (490)
.....+.|+|++ .+++++ |++|++||+.++... .. +..............++||||+
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~Spdg-- 73 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSS-----------------VF-LENSTFDEFGHSINDYSISPDG-- 73 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEE-----------------EE-ECTTTTTTCCSCCCEEEECTTS--
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCCCceE-----------------EE-EechhhhhhcccccceEECCCC--
Confidence 346689999999 788876 899999999987610 00 1110000111123458899996
Q ss_pred ceEEEEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 125 EFKEEIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 125 ~~~~~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
+........ +..+.+.+|++. .++. ..+..|.+.+..++||||| +.||.+. |+.|++|++.++
T Consensus 74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~-----~~~~----~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 74 QFILLEYNYVKQWRHSYTASYDIYDLN-----KRQL----ITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETT-----TTEE----CCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTS
T ss_pred CEEEEEECCeeeEEEccceEEEEEECC-----CCcE----EEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCC
Confidence 222211110 112677899985 3322 2355678899999999999 6777764 689999999887
Q ss_pred Ccccccccc--eeeecccc---------cCEEEEEEeeCCCCEEEEEeCCC-----------------------------
Q psy17682 199 GISRTLTEP--VVDLLYHQ---------RRVGLVLWHPTAQNVLLTAGSDN----------------------------- 238 (490)
Q Consensus 199 ~~~~~~~~~--~~~~~~~~---------~~v~~~~~~p~~~~~l~s~~~dg----------------------------- 238 (490)
+..+..... ...+.++. +....+.|+|||+ .|+.++.|.
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 654321110 00111121 1223589999996 677664321
Q ss_pred -------cEEEEECCC---Ce--eEEEEe------cCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc----e
Q psy17682 239 -------NVAIWNVGT---GE--IMIQIE------CHPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGA----I 292 (490)
Q Consensus 239 -------~v~iwd~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~ 292 (490)
.|++||+.+ ++ ....+. +|...+..++|+|||+.++.... +..|++||+.+++ +
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 488899988 73 233343 26777999999999997666543 3379999999887 2
Q ss_pred e--eee--eecCCCc----eeEEEEeCCCcEEE-EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682 293 E--EEA--VCHEGSK----ATRAIYLKSGLIFT-TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV 363 (490)
Q Consensus 293 ~--~~~--~~~~~~~----~~~~~~s~~~~~l~-~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 363 (490)
. ..+ ..+.... .....|+|||+.++ ..+++.....|++||...+... .+. .....+..+. .+|++.|
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT--~g~~~v~~~~-~~d~~~i 377 (740)
T 4a5s_A 302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FIT--KGTWEVIGIE-ALTSDYL 377 (740)
T ss_dssp CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESC--CSSSCEEEEE-EECSSEE
T ss_pred eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecc--cCCEEEEEEE-EEeCCEE
Confidence 2 222 2333321 23678999999877 6665445678999999865432 111 2223344443 3558888
Q ss_pred EEEecC----CCeEEEEEecCCCCeeE-Eeeee--eCCCceeeEEEeeCceeEEee
Q psy17682 364 YLCGKG----DSVIRYFEITAEPPFVH-YINTF--QTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 364 ~~~g~~----dg~i~iwd~~~~~~~~~-~~~~~--~~~~~i~~~~~sp~~~~l~~~ 412 (490)
++++.. .+...||.+........ .+... ........+.|||++.+++..
T Consensus 378 ~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 378 YYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp EEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred EEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 777765 34556666554321111 22110 112467889999999876644
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=4.3e-18 Score=162.04 Aligned_cols=255 Identities=8% Similarity=0.028 Sum_probs=169.7
Q ss_pred ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCC-EEEEEe------
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN-VLLTAG------ 235 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~------ 235 (490)
+...+..++|+|+| ++|++++.+ .|.+|++. +++...... ...+ +.+.+++|+|+++. +++++.
T Consensus 38 ~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~-----~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 38 QDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEAS-----HPIG-GHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp TTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEE-----EECC-SSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeE-----eecC-CCCccEEECCCCCEEEEEEecCCccee
Confidence 33568899999998 788888887 99999987 665432111 1111 22456899999953 244442
Q ss_pred -------CCCcEEEEECC-CCeeEEEEe----cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCcee--eeeeec
Q psy17682 236 -------SDNNVAIWNVG-TGEIMIQIE----CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPR-TGAIE--EEAVCH 299 (490)
Q Consensus 236 -------~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~--~~~~~~ 299 (490)
.++.+.+|++. +++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++.. ..+...
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 68999999997 465544443 24567999999999998887764 6899999998 67643 223221
Q ss_pred C-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC--CCCCe---EEEeccCC----C-------ceeeee-ecCCCC
Q psy17682 300 E-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH--LDEPI---VMVELDTS----N-------GVMFPL-YDPDTN 361 (490)
Q Consensus 300 ~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~--~~~~~---~~~~~~~~----~-------~i~~~~-~s~~~~ 361 (490)
. +..+..++|+|+|++++++.. .++.+.+|+++. +.... .+...... . .+..++ |+|||+
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCCCCCCEeEECCCCCEEEEEEC--CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence 1 334889999999998877753 357889987653 32111 11112111 1 478899 999999
Q ss_pred eEEEEecCCC-----eEEEEEec-CCCCeeEEeeeee-CCCceeeEEEee---CceeEEeec---ceeEEEEecCCCceE
Q psy17682 362 LVYLCGKGDS-----VIRYFEIT-AEPPFVHYINTFQ-TPDPQRGIGMMP---KRGCDVNSC---EIGRFFRLNNSGLCQ 428 (490)
Q Consensus 362 ~l~~~g~~dg-----~i~iwd~~-~~~~~~~~~~~~~-~~~~i~~~~~sp---~~~~l~~~~---~~~~~~~~~~~~~~~ 428 (490)
+|+++...+. .|.+|++. +++ +........ .......++|+| ||+++++++ +.+++|++.... +.
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~-l~ 345 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF-LH 345 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE-EE
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh-Cc
Confidence 9976554333 89999997 444 222111122 234567899999 788877663 478999998764 55
Q ss_pred EE
Q psy17682 429 VV 430 (490)
Q Consensus 429 ~i 430 (490)
.+
T Consensus 346 ~~ 347 (365)
T 1jof_A 346 RV 347 (365)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=8.4e-18 Score=160.02 Aligned_cols=207 Identities=9% Similarity=0.022 Sum_probs=136.4
Q ss_pred eEEEECCCCCC-EEEEEe-------------CCCcEEEEECCC-CCcccccccceeee-cccccCEEEEEEeeCCCCEEE
Q psy17682 169 LDIAWSPHDDN-VIASGS-------------EDCVVKVWQIPD-GGISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLL 232 (490)
Q Consensus 169 ~~~~~~p~~~~-~l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~ 232 (490)
.+++|+|+|.. +++++. .+|++.+|++.. ++....+. .+ ..+...+.+++|+|+|+ +++
T Consensus 86 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~spdG~-~l~ 160 (365)
T 1jof_A 86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ----NYEYQENTGIHGMVFDPTET-YLY 160 (365)
T ss_dssp GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE----EEECCTTCCEEEEEECTTSS-EEE
T ss_pred ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe----eEEeCCCCcceEEEECCCCC-EEE
Confidence 34678887722 344442 689999999974 54332211 11 12456789999999996 666
Q ss_pred EEe-CCCcEEEEECC-CCeeE--EEEe--cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCceee---eeeec-
Q psy17682 233 TAG-SDNNVAIWNVG-TGEIM--IQIE--CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPR--TGAIEE---EAVCH- 299 (490)
Q Consensus 233 s~~-~dg~v~iwd~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~~~~- 299 (490)
++. .++.|++||+. +++.. ..+. .+...+..++|+|+|+++++++. ++.|.+|++. +++... .+...
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 655 46899999998 67643 3343 24567999999999999888775 6899999765 455421 22211
Q ss_pred ---CC-C-------ceeEEE-EeCCCcEEEEEeCCCce----eEEEEecCCCCCCCeEEE-ecc-CCCceeeeeecC---
Q psy17682 300 ---EG-S-------KATRAI-YLKSGLIFTTGFSKMSE----RQYSLRAPDHLDEPIVMV-ELD-TSNGVMFPLYDP--- 358 (490)
Q Consensus 300 ---~~-~-------~~~~~~-~s~~~~~l~~~~~~~~~----~~i~iwd~~~~~~~~~~~-~~~-~~~~i~~~~~s~--- 358 (490)
.+ . .+..++ |+|+|++|+++... .+ +.|.+|++.......... ... +......++|+|
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence 01 1 378899 99999988766521 11 289999986322222211 122 334567889999
Q ss_pred CCCeEEEEecCCCeEEEEEecCC
Q psy17682 359 DTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 359 ~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
||++|++++..++.|.+|++...
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCEEEEEEcCCCeEEEEEEchh
Confidence 89999665555699999999876
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=4.6e-19 Score=184.49 Aligned_cols=279 Identities=14% Similarity=0.122 Sum_probs=183.4
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC---CeeEEEECCCCCCEEEEEeC----
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG---PVLDIAWSPHDDNVIASGSE---- 186 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~~~---- 186 (490)
..++|+|+. + +.....++.+.+|+.. .++ ....+.+|.. .|.+++|+||| ++|++++.
T Consensus 19 ~~~~~s~dg--~----~~~~~~d~~i~~~~~~-----~g~---~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQ--E----YLHQSADNNIVLYNIE-----TGQ---SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSS--E----EEEECTTSCEEEEESS-----SCC---EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEEC
T ss_pred CccEECCCC--e----EEEEcCCCCEEEEEcC-----CCc---EEEEEccccccccceeeEEECCCC-CeEEEEecCcee
Confidence 478899986 2 2334468999999985 222 2334445543 49999999999 78888766
Q ss_pred -----CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecCCCc
Q psy17682 187 -----DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECHPDI 260 (490)
Q Consensus 187 -----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~ 260 (490)
++.|++||+.+++.+.... ....+..++|+|+|+ .|+.+. ++.|++||+.+++..... .++...
T Consensus 84 ~~~s~~~~i~~~d~~~g~~~~~~~--------l~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~ 153 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEFVRGNE--------LPRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGRENK 153 (719)
T ss_dssp SSSCEEEEEEEEETTTTEECCSSC--------CCSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred EEeecceEEEEEECCCCcccccee--------cCcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC
Confidence 7899999998886521111 124588899999996 677665 789999999888765432 222222
Q ss_pred E-----------------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCC
Q psy17682 261 V-----------------YSASWNWDGSKLLTTCKDK----------------------------------KMRIINPRT 289 (490)
Q Consensus 261 v-----------------~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~ 289 (490)
+ .+++|+|||+.|++++.|. .|++||+.+
T Consensus 154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~ 233 (719)
T 1z68_A 154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY 233 (719)
T ss_dssp EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC
T ss_pred eEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC
Confidence 2 4899999999999988652 789999998
Q ss_pred Ccee--ee------eeecCCCceeEEEEeCCCcEEEEEeC-CCceeEEEEec----CCCCCCCeEEE--eccCCCcee--
Q psy17682 290 GAIE--EE------AVCHEGSKATRAIYLKSGLIFTTGFS-KMSERQYSLRA----PDHLDEPIVMV--ELDTSNGVM-- 352 (490)
Q Consensus 290 ~~~~--~~------~~~~~~~~~~~~~~s~~~~~l~~~~~-~~~~~~i~iwd----~~~~~~~~~~~--~~~~~~~i~-- 352 (490)
++.. .. +..+.. .+..++|+||++++++... ......|.+|| ..+++...... ...+...+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (719)
T 1z68_A 234 PAYVGPQEVPVPAMIASSDY-YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGF 312 (719)
T ss_dssp HHHHCCEECCCCHHHHTSCE-EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSS
T ss_pred CCccceeEccCCccCCCCcc-eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccc
Confidence 7653 11 112333 3789999999988777542 12345789999 76654332221 013334455
Q ss_pred ---eeeecCCCCeEEE-EecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec-------ceeEEE
Q psy17682 353 ---FPLYDPDTNLVYL-CGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-------EIGRFF 419 (490)
Q Consensus 353 ---~~~~s~~~~~l~~-~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~ 419 (490)
.+.|+|||+.+++ ++..+| .|++||+.+++ ...+. .+...+..+.++ ++..++... ...++|
T Consensus 313 ~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt--~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 313 FVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQIT--SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY 387 (719)
T ss_dssp SCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECS--CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred cCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEecc--cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence 7899999997654 344555 56667776655 22332 233357777777 665544332 346888
Q ss_pred EecC
Q psy17682 420 RLNN 423 (490)
Q Consensus 420 ~~~~ 423 (490)
.+..
T Consensus 388 ~~~~ 391 (719)
T 1z68_A 388 RISI 391 (719)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8764
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=2.3e-18 Score=174.61 Aligned_cols=233 Identities=10% Similarity=-0.036 Sum_probs=161.8
Q ss_pred ccCCeeEEEECCCCCCEEEEEeC-CCcEEEEECCCCCcccccccceeeecccc-cCEEEEEEeeCCCCEEEEEeC---CC
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSE-DCVVKVWQIPDGGISRTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGS---DN 238 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~---dg 238 (490)
+..+|++++|+||| +.||+++. ||+++||++.+++.. . +..|. ..+..++|+|+ + ++++++. +.
T Consensus 20 ~~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~~-~-------lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~ 88 (582)
T 3o4h_A 20 IAVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGETV-K-------LNREPINSVLDPHYGVG-R-VILVRDVSKGAE 88 (582)
T ss_dssp HHSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEEE-E-------CCSSCCSEECEECTTCS-E-EEEEEECSTTSC
T ss_pred hccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCcE-e-------eecccccccccccCCCC-e-EEEEeccCCCCc
Confidence 46789999999999 77887776 999999998555432 2 22344 58999999998 4 7777765 45
Q ss_pred cEEEEECCC---CeeEEEEecCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682 239 NVAIWNVGT---GEIMIQIECHPDIVYSASWNWDGSK-LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL 314 (490)
Q Consensus 239 ~v~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 314 (490)
..++|.+.. +... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++.......+. ..++|+|||+
T Consensus 89 ~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~ 162 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGD 162 (582)
T ss_dssp CEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETT
T ss_pred ceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCC
Confidence 556655432 2222 3432 223456788888853 3444445556699999887655443322 7889999999
Q ss_pred EEEEEeCC-CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeee
Q psy17682 315 IFTTGFSK-MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTF 391 (490)
Q Consensus 315 ~l~~~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~ 391 (490)
++++++.+ +....|++||+.+++.. . ...+...+..++|||||+.|+ ++..++ .|++||+.+++.. .+.
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~--l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~~~--~~~-- 234 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLR-V--FDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGSVE--DLE-- 234 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCE-E--ECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCCEE--ECC--
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCce-E--eecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCcEE--Ecc--
Confidence 99977632 11278999999876532 2 234556689999999999995 777788 8999999988732 222
Q ss_pred eCCCceeeEE--------EeeCceeEEee--cceeEEEEe
Q psy17682 392 QTPDPQRGIG--------MMPKRGCDVNS--CEIGRFFRL 421 (490)
Q Consensus 392 ~~~~~i~~~~--------~sp~~~~l~~~--~~~~~~~~~ 421 (490)
.+...+.+++ |+|||.+++++ ++..++|.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 2334566667 99999776665 457889987
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=5.2e-17 Score=169.19 Aligned_cols=252 Identities=9% Similarity=0.037 Sum_probs=164.9
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--------
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-------- 237 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-------- 237 (490)
....++.|+|+| .+++++ |++|++||+.+++....+.... ...+......++|+|||+ .|+.++.+
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFLENST--FDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEECTTT--TTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCE
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEEechh--hhhhcccccceEECCCCC-EEEEEECCeeeEEEcc
Confidence 346689999998 788886 8999999999987644332100 001112234589999996 77777765
Q ss_pred -CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCC-------------
Q psy17682 238 -NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGS------------- 302 (490)
Q Consensus 238 -g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~------------- 302 (490)
+.+.+||+.+++.. .+..+...+...+|||||+.|+.+. ++.|++||+.+++..+... ++...
T Consensus 91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred ceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 56779999998754 3566778899999999999999885 6899999998877544222 22211
Q ss_pred ---ceeEEEEeCCCcEEEEEeCCC---------------------------------ceeEEEEecCCC---CCCCeEEE
Q psy17682 303 ---KATRAIYLKSGLIFTTGFSKM---------------------------------SERQYSLRAPDH---LDEPIVMV 343 (490)
Q Consensus 303 ---~~~~~~~s~~~~~l~~~~~~~---------------------------------~~~~i~iwd~~~---~~~~~~~~ 343 (490)
....+.|||||+.|+..+.+. ....|++||+.+ +.......
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 123588999999998764211 123688899987 53211211
Q ss_pred ec------cCCCceeeeeecCCCCeEEEEe---cCCCeEEEEEecCCCC----e-eEEeeeeeCCCce-----eeEEEee
Q psy17682 344 EL------DTSNGVMFPLYDPDTNLVYLCG---KGDSVIRYFEITAEPP----F-VHYINTFQTPDPQ-----RGIGMMP 404 (490)
Q Consensus 344 ~~------~~~~~i~~~~~s~~~~~l~~~g---~~dg~i~iwd~~~~~~----~-~~~~~~~~~~~~i-----~~~~~sp 404 (490)
.. .+...+..++|+|||+.++... +.+..|++||+.++++ . ...+....+...+ ..++|+|
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 11 1455688999999999664433 2345799999998862 0 1111111233333 3789999
Q ss_pred CceeEE-ee---cc--eeEEEEecCCC
Q psy17682 405 KRGCDV-NS---CE--IGRFFRLNNSG 425 (490)
Q Consensus 405 ~~~~l~-~~---~~--~~~~~~~~~~~ 425 (490)
||+.++ .. ++ .+.+|++..+.
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 998655 33 22 44555555443
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=3.5e-17 Score=157.38 Aligned_cols=234 Identities=12% Similarity=0.102 Sum_probs=148.4
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-------------------EEEeeCCCCE
Q psy17682 170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-------------------VLWHPTAQNV 230 (490)
Q Consensus 170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~p~~~~~ 230 (490)
.+.|+|+| +.|+.++.++.|.+|++.+++....... +...... +.|+|+++ .
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~-------~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~ 155 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTV-------DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-W 155 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-H
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEec-------ccccCCCCCEEEeccCCccccccccccccCCCCc-c
Confidence 36899988 7888888888999999887764332211 1111111 34567764 3
Q ss_pred EEEE-----eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceeeeeee
Q psy17682 231 LLTA-----GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTGAIEEEAVC 298 (490)
Q Consensus 231 l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~ 298 (490)
++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++.......
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH 234 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC
T ss_pred eeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc
Confidence 3332 35678999999988765544 4667789999999 78877776643 3689999876653332221
Q ss_pred cCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC-CCCeEEEEec-------
Q psy17682 299 HEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-DTNLVYLCGK------- 368 (490)
Q Consensus 299 ~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~------- 368 (490)
.....+..+.|+|+|+.|+..+.+. ..+.|++||+.++... .+.... ... +.|+| ||++++++++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-EVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVA 309 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEEECC---SEE-EEEECSSSSEEEEEECCC-----
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-EeeeCC---CCC-CCccCCCCceEEEecCCcceeec
Confidence 1122377889999999776664211 1256999999876532 222211 233 89999 9998754331
Q ss_pred --------CCCeEEEEEecCCCCeeEEeeeeeCCC-----------ceeeEEEeeCceeEEeec---ceeEEEEec
Q psy17682 369 --------GDSVIRYFEITAEPPFVHYINTFQTPD-----------PQRGIGMMPKRGCDVNSC---EIGRFFRLN 422 (490)
Q Consensus 369 --------~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------~i~~~~~sp~~~~l~~~~---~~~~~~~~~ 422 (490)
.+..|++||+.+++. ..+. .+.. .+..++|+|||..++... +...+|.+.
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~--~~l~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAKSA--QKLC--KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp -----CCCCCCEEEEEETTTTBC--CEEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccccccCCCCcEEEEecccCce--EEcc--CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 347899999987752 1222 1211 256789999998766543 244566554
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=2.4e-16 Score=151.21 Aligned_cols=254 Identities=10% Similarity=0.002 Sum_probs=166.3
Q ss_pred eeecccCCeeE-----EEECCCCCCEEEEEeC-CCc--EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682 160 LVGGHKGPVLD-----IAWSPHDDNVIASGSE-DCV--VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231 (490)
Q Consensus 160 ~~~~h~~~V~~-----~~~~p~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 231 (490)
.+..|...... .+|+||| ++|+.++. ++. |.+||+.+++..... .++...+..+.|+|+++ .|
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------~~~~~~~~~~~~spdg~-~l 95 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVATQLT-------EGRGDNTFGGFLSPDDD-AL 95 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTCEEEECC-------CSSCBCSSSCEECTTSS-EE
T ss_pred EecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCCCceEEee-------eCCCCCccceEEcCCCC-EE
Confidence 33445544444 7899999 66777666 674 888898877654322 22444455678999996 88
Q ss_pred EEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE--EcCCCCEEEEEe----------------------CCCeEEEEeC
Q psy17682 232 LTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS--WNWDGSKLLTTC----------------------KDKKMRIINP 287 (490)
Q Consensus 232 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~iwd~ 287 (490)
+.++.++.|++||+.+++....+..+...+.... ++|++++++... .+..|++||+
T Consensus 96 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 175 (388)
T 3pe7_A 96 FYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL 175 (388)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred EEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence 8888889999999999987776665665554444 489999887532 3467999999
Q ss_pred CCCceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCc---eeEEEEecCCCCCCCeEEEeccCC--CceeeeeecCCCC
Q psy17682 288 RTGAIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMS---ERQYSLRAPDHLDEPIVMVELDTS--NGVMFPLYDPDTN 361 (490)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~---~~~i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~ 361 (490)
.+++..... .+.. .+..+.|+| +|+.|+....... ...|.++|...... ..+. .+. ..+..+.|+|||+
T Consensus 176 ~~g~~~~l~-~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 176 KTGESTVIL-QENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVK--THAEGESCTHEFWVPDGS 250 (388)
T ss_dssp TTCCEEEEE-EESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESC--CCCTTEEEEEEEECTTSS
T ss_pred CCCceEEee-cCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEee--eCCCCcccccceECCCCC
Confidence 988754443 3333 388999999 9998887764211 34688888765432 2221 222 2477889999999
Q ss_pred eEEEEecCCC----eEEEEEecCCCCeeEEeeeeeCC----CceeeEEEeeCceeEEee-----------cceeEEEEec
Q psy17682 362 LVYLCGKGDS----VIRYFEITAEPPFVHYINTFQTP----DPQRGIGMMPKRGCDVNS-----------CEIGRFFRLN 422 (490)
Q Consensus 362 ~l~~~g~~dg----~i~iwd~~~~~~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~-----------~~~~~~~~~~ 422 (490)
.|++++..++ .|++||+.+++. +.+..+... .....++|+|||+.++.. ...+.+|++.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLEN--RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCE--EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred EEEEEecCCCCCcceEEEEecCCCce--EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 8855443322 399999998862 222222210 012345899999877732 3366778877
Q ss_pred CCCceEEE
Q psy17682 423 NSGLCQVV 430 (490)
Q Consensus 423 ~~~~~~~i 430 (490)
++. +..+
T Consensus 329 ~~~-~~~l 335 (388)
T 3pe7_A 329 NGT-QHRV 335 (388)
T ss_dssp TTE-EEEE
T ss_pred CCc-eEEe
Confidence 765 4443
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=1.8e-15 Score=138.59 Aligned_cols=251 Identities=8% Similarity=0.041 Sum_probs=175.2
Q ss_pred ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682 41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE 120 (490)
Q Consensus 41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 120 (490)
.+|-..+.+++++|++ .++++...++.|.+||... . ....
T Consensus 26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g-~------------------~~~~-------------------- 65 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG-R------------------FKFQ-------------------- 65 (286)
T ss_dssp TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS-C------------------EEEE--------------------
T ss_pred CCccCCCceEEECCCC-CEEEEECCCCEEEEECCCC-c------------------EEEE--------------------
Confidence 4677889999999998 7888888889999998763 2 0000
Q ss_pred ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEE-CCCCCCEEEEEeC-CCcEEEEECCCC
Q psy17682 121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAW-SPHDDNVIASGSE-DCVVKVWQIPDG 198 (490)
Q Consensus 121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~p~~~~~l~s~~~-dg~i~iwd~~~~ 198 (490)
+.. .+ ...+|...+.++++ .+++ .++++... ++.|.+|+ .++
T Consensus 66 ---------------------~~~------~~-------~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g 109 (286)
T 1q7f_A 66 ---------------------FGE------CG-------KRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYG 109 (286)
T ss_dssp ---------------------ECC------BS-------SSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTS
T ss_pred ---------------------ecc------cC-------CCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCC
Confidence 000 00 00135567889999 4655 56666543 78999999 566
Q ss_pred CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEE
Q psy17682 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTT 276 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 276 (490)
+.+..+.. .+...+.+++++|++. ++++...++.|.+||. +++.+..+. .+...+..++++++|+++++.
T Consensus 110 ~~~~~~~~------~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 110 QFVRKFGA------TILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp CEEEEECT------TTCSCEEEEEECTTSC-EEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred cEEEEecC------ccCCCceEEEEeCCCC-EEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 55443321 2445689999999985 7887777899999996 466666664 345578999999999988887
Q ss_pred eCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCcee-EEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682 277 CKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSER-QYSLRAPDHLDEPIVMVELDTSNGVMFP 354 (490)
Q Consensus 277 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 354 (490)
..++.|++||.. ++.+..+..+. ...+..++++++|+++++.. .++ .|.+||... +....+........+..+
T Consensus 182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~---~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADN---HNNFNLTIFTQDG-QLISALESKVKHAQCFDV 256 (286)
T ss_dssp GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEEC---SSSCEEEEECTTS-CEEEEEEESSCCSCEEEE
T ss_pred CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeC---CCCEEEEEECCCC-CEEEEEcccCCCCcceeE
Confidence 888999999974 55555554332 13488999999999888876 354 899999653 322222222222347789
Q ss_pred eecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 355 LYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+++|+|+.+ ++ +.|+.|++|++....
T Consensus 257 ~~~~~g~l~-vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 257 ALMDDGSVV-LA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEETTTEEE-EE-ETTTEEEEEECSCCC
T ss_pred EECCCCcEE-EE-CCCCeEEEEEccccc
Confidence 999999755 66 468999999987654
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=8.5e-16 Score=143.86 Aligned_cols=245 Identities=9% Similarity=-0.002 Sum_probs=172.8
Q ss_pred cCCeeEEEECCCCCCEEEEEeCC------------------------CcEEEEECCCCCcccccccceeeecccccCEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSED------------------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 220 (490)
-+.+.+++++|+| +++++...+ ++|.+||..+++....+. .++-.....
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG------KNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC------TTTCSSEEE
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC------CCccCCceE
Confidence 4679999999998 788887777 479999988887654322 124457899
Q ss_pred EEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe---------cCCCcEEEEEEcC-CCCEEEEEe-CCCeEEEEeCC
Q psy17682 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE---------CHPDIVYSASWNW-DGSKLLTTC-KDKKMRIINPR 288 (490)
Q Consensus 221 ~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~ 288 (490)
++++|++. ++++...++.|++||..... .+..+. .+......++++| +++++++.+ .++.|++|| .
T Consensus 96 ia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~ 173 (329)
T 3fvz_A 96 LSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-P 173 (329)
T ss_dssp EEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-T
T ss_pred EEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-C
Confidence 99999995 88888888999999986442 455552 3445689999999 788888876 689999999 5
Q ss_pred CCceeeeeeecCC---------CceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682 289 TGAIEEEAVCHEG---------SKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP 358 (490)
Q Consensus 289 ~~~~~~~~~~~~~---------~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 358 (490)
+++.+..+..... ..+..++++|+ +.++++.. .++.|++|+..+++....+........+..++|+|
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~---~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR---ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 6776666542211 12789999998 77777766 57899999998655333332223445678889999
Q ss_pred ------CCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeEEEeeCceeEEeecc--eeEEEEecC
Q psy17682 359 ------DTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNN 423 (490)
Q Consensus 359 ------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~ 423 (490)
+|+.. ++...+..|++|+..+++ +...+.. ..+.....+++++|+|.++++... .+++|++..
T Consensus 251 g~~~~~~g~~~-v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 251 GFLFAVNGKPY-FGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TEEEEEECCCC-TTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEEEeCCCEE-eccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33322 333445689999999887 2222211 123346899999999988777744 455555543
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=4.2e-16 Score=160.58 Aligned_cols=238 Identities=9% Similarity=-0.010 Sum_probs=144.5
Q ss_pred CCCCCCEEEEE-eCCCcEEEEECC--C-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----------Cc
Q psy17682 174 SPHDDNVIASG-SEDCVVKVWQIP--D-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----------NN 239 (490)
Q Consensus 174 ~p~~~~~l~s~-~~dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----------g~ 239 (490)
||||+.+|+.+ ..+..|.++++. . ++ ...+... ....|...+.+++|+|+|+ .|+.++.+ ..
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~--~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPV--SAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCC--CCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCC--ccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeE
Confidence 49985414444 345667777765 2 33 2222210 0001566789999999996 77777766 58
Q ss_pred EEEEECCC------CeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEeCC-CCc--eeeeee-ecC
Q psy17682 240 VAIWNVGT------GEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKD--------KKMRIINPR-TGA--IEEEAV-CHE 300 (490)
Q Consensus 240 v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~-~~~ 300 (490)
|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. +++ ....+. .+.
T Consensus 163 i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred EEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 99999987 554 4454 566778889999999999988755 379999998 562 333333 333
Q ss_pred CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc---------eeeeeecCCCCeEEEEecCCC
Q psy17682 301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG---------VMFPLYDPDTNLVYLCGKGDS 371 (490)
Q Consensus 301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~---------i~~~~~s~~~~~l~~~g~~dg 371 (490)
. .+..+.|+|||++++++..+ ....|.+||+.+++. .....+... +..++|+|+++++ ++++. +
T Consensus 242 ~-~~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~~~~~---~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~-~~~~~-~ 314 (662)
T 3azo_A 242 E-AIAQAEWAPDGSLIVATDRT-GWWNLHRVDPATGAA---TQLCRREEEFAGPLWTPGMRWFAPLANGLIA-VVHGK-G 314 (662)
T ss_dssp B-CEEEEEECTTSCEEEEECTT-SSCEEEEECTTTCCE---EESSCCSSBSSCCCCSTTCCSEEECTTSCEE-EEEBS-S
T ss_pred c-eEcceEECCCCeEEEEECCC-CCeEEEEEECCCCce---eecccccccccCccccccCceEeEeCCCEEE-EEEEc-C
Confidence 3 48899999999977666532 123788888755431 111111111 4578888999877 66777 9
Q ss_pred eEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEeec--ceeEEEEec--CCC
Q psy17682 372 VIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVNSC--EIGRFFRLN--NSG 425 (490)
Q Consensus 372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~~--~~~~~~~~~--~~~ 425 (490)
.++||.+.......+.+. .+...+..+ +++++..++++++ ....+|.++ +++
T Consensus 315 ~~~l~~~d~~~~~~~~l~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 315 AAVLGILDPESGELVDAA--GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SCEEEEEETTTTEEEECC--SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ccEEEEEECCCCcEEEec--CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 999996653211122332 223456666 4444444444433 234566554 554
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=4.1e-15 Score=136.27 Aligned_cols=249 Identities=10% Similarity=0.094 Sum_probs=171.5
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe-eCCCCEEEEEeC-CCcE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH-PTAQNVLLTAGS-DNNV 240 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~-dg~v 240 (490)
+|-..+.+++++|++ +++++...++.|.+||.. ++....+.... ...++...+.++++. +++ +++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~-~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECG-KRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBS-SSTTCBSSEEEEEEETTTT-EEEEEECGGGCEE
T ss_pred CccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccC-CCcccccCceEEEEEcCCC-eEEEEcCCCCCEE
Confidence 566789999999988 788888889999999976 54444332100 012344678999995 565 35555533 7899
Q ss_pred EEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEEEE
Q psy17682 241 AIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 241 ~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 318 (490)
.+|| .+++.+..+. .+...+.+++++|+|+++++...++.|++||.. ++.+..+.. .....+..++++++|+++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5677776664 334578999999999988887788999999964 555555542 12224889999999998887
Q ss_pred EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682 319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEPPFVHYINTFQTPDPQ 397 (490)
Q Consensus 319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~i 397 (490)
.. .++.|++||... .....+....+...+..++++++|+++ ++...++ .|.+|+.. ++ ....+........+
T Consensus 181 ~~---~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~-v~~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 181 DN---RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFNLTIFTQD-GQ-LISALESKVKHAQC 253 (286)
T ss_dssp EG---GGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCEEEEECTT-SC-EEEEEEESSCCSCE
T ss_pred EC---CCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEE-EEeCCCCEEEEEECCC-CC-EEEEEcccCCCCcc
Confidence 76 578999999753 211111111112467899999999766 6666665 99999954 44 23333222222347
Q ss_pred eeEEEeeCceeEEee-cceeEEEEecCC
Q psy17682 398 RGIGMMPKRGCDVNS-CEIGRFFRLNNS 424 (490)
Q Consensus 398 ~~~~~sp~~~~l~~~-~~~~~~~~~~~~ 424 (490)
.+++++|+|.++++. +..+++|++...
T Consensus 254 ~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 254 FDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred eeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 799999999887775 447788887654
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=1.9e-15 Score=143.15 Aligned_cols=221 Identities=10% Similarity=0.062 Sum_probs=147.7
Q ss_pred CCeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccc-cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRT-LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.....++++|+| ++|+++.. +++|.+||+.+++.+.. +. . .....+.+.|++...+++.+.||.+.+
T Consensus 108 ~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--------~-~~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 108 NYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYVEDVTA--------A-AGCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp CCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEEEEEGG--------G-TTEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred CCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEEEEEec--------C-CCcceeEEcCCCCeeEEEECCCCcEEE
Confidence 456678999999 67777653 68999999998876554 33 1 122346678887668889999999999
Q ss_pred EECCC-CeeEEEE------ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--eeeee------cCCC---ce
Q psy17682 243 WNVGT-GEIMIQI------ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE--EEAVC------HEGS---KA 304 (490)
Q Consensus 243 wd~~~-~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~------~~~~---~~ 304 (490)
|++.. ++..... .....++ .+.+++++..++..+.++.+.++|+...... ..+.. +... ..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 256 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGY 256 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCS
T ss_pred EEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCe
Confidence 99865 5544221 1122222 3344677777888888999999999765422 22110 0010 02
Q ss_pred eEEEEeCCCcEEEEEeC-CC-------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682 305 TRAIYLKSGLIFTTGFS-KM-------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF 376 (490)
Q Consensus 305 ~~~~~s~~~~~l~~~~~-~~-------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw 376 (490)
..++++|++..+.++.. ++ ....|.+||+.+.+. +..+.... ...++|+|||++|++++ . +.|.+|
T Consensus 257 ~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~---v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~ 330 (361)
T 2oiz_A 257 NLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR---VARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVY 330 (361)
T ss_dssp SCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE---EEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEE
T ss_pred eEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE---EEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEE
Confidence 23789999776665532 11 135899999988653 33333334 89999999999996554 4 999999
Q ss_pred EecCC--CCeeEEeeee-eCCCceeeEEEeeCce
Q psy17682 377 EITAE--PPFVHYINTF-QTPDPQRGIGMMPKRG 407 (490)
Q Consensus 377 d~~~~--~~~~~~~~~~-~~~~~i~~~~~sp~~~ 407 (490)
|..++ + .+..+ ..+.....++++|+|.
T Consensus 331 D~~t~~l~----~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPK----LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCE----EEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcce----eeEEeccCCCCcEEEEecCCCC
Confidence 99998 5 44443 4456778999999985
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=4.6e-15 Score=139.11 Aligned_cols=232 Identities=10% Similarity=0.048 Sum_probs=157.4
Q ss_pred eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--
Q psy17682 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-- 237 (490)
Q Consensus 160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-- 237 (490)
.+.++...+.+++|+|+| ++++++..++.|.+||..+++..... ..+...+.+++++|++. ++++...+
T Consensus 39 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~-------~~~~~~~~~i~~~~dg~-l~v~~~~~~~ 109 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPF-------VSHKANPAAIKIHKDGR-LFVCYLGDFK 109 (333)
T ss_dssp EEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEE-------ECSSSSEEEEEECTTSC-EEEEECTTSS
T ss_pred EEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEe-------eCCCCCcceEEECCCCc-EEEEeCCCCC
Confidence 344566678999999988 67888888999999998877643321 12557799999999985 77776655
Q ss_pred --CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCCCceeEE
Q psy17682 238 --NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEGSKATRA 307 (490)
Q Consensus 238 --g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 307 (490)
+.|.+||..+++....+. .+...+.+++++|+|+++++... .+.|..+|..+++...... ... .+..+
T Consensus 110 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~i 187 (333)
T 2dg1_A 110 STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NIS-VANGI 187 (333)
T ss_dssp SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EES-SEEEE
T ss_pred CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCC-cccce
Confidence 689999998776543333 24457899999999987776654 3667888876655433222 222 37889
Q ss_pred EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE-E-----EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV-M-----VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~-~-----~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
+|+|+|+.+..+.. .++.|.+||......... . ........+..++++++|+++ ++...++.|.+||.. +
T Consensus 188 ~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~v~~~d~~-g 263 (333)
T 2dg1_A 188 ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNKR-G 263 (333)
T ss_dssp EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECTT-S
T ss_pred EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEE-EEEcCCCEEEEECCC-C
Confidence 99999985544431 467899999864222111 1 111112357789999999866 666667899999984 4
Q ss_pred CCeeEEeeeeeCCC-------ceeeEEEeeCceeEE
Q psy17682 382 PPFVHYINTFQTPD-------PQRGIGMMPKRGCDV 410 (490)
Q Consensus 382 ~~~~~~~~~~~~~~-------~i~~~~~sp~~~~l~ 410 (490)
+ . +..+..+. .+.+++|+||+..++
T Consensus 264 ~-~---~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~ 295 (333)
T 2dg1_A 264 Y-P---IGQILIPGRDEGHMLRSTHPQFIPGTNQLI 295 (333)
T ss_dssp C-E---EEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred C-E---EEEEEcCCCccccccCcceEEECCCCCEEE
Confidence 4 2 22222221 578999999975444
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=8.6e-15 Score=136.98 Aligned_cols=214 Identities=12% Similarity=0.031 Sum_probs=150.3
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC-ccccccccee--eecccccCEEEEEEee-CCCCEEEEEe-CC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG-ISRTLTEPVV--DLLYHQRRVGLVLWHP-TAQNVLLTAG-SD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~p-~~~~~l~s~~-~d 237 (490)
++-....+++++|+| +++++...++.|++|+..... .+..+..... .-.++-....+++++| ++ +++++.+ .+
T Consensus 88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCN 165 (329)
T ss_dssp TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSC
T ss_pred CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCC
Confidence 445678999999988 688888889999999975432 3333211000 0023445789999999 66 4777776 68
Q ss_pred CcEEEEECCCCeeEEEEecCC----------CcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeec-CCCcee
Q psy17682 238 NNVAIWNVGTGEIMIQIECHP----------DIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKAT 305 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~ 305 (490)
+.|++|+ .+++.+..+.... .....++++|+ ++++++...++.|++||..+++.+..+... .+..+.
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 9999999 5677777664222 33889999998 777777778899999999988888777522 223478
Q ss_pred EEEEeCCCcEEEEEeC----CCceeEEEEecCCCCCCCeEEEe-ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 306 RAIYLKSGLIFTTGFS----KMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~----~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
.++++| +..+++.+. +.....+++|+..+++....+.. ..+......++++|+| .|+++...++.|++|++..
T Consensus 245 ~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 245 AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 899999 555444321 11345899999887653222210 1344568899999999 6668888999999999875
Q ss_pred C
Q psy17682 381 E 381 (490)
Q Consensus 381 ~ 381 (490)
.
T Consensus 323 ~ 323 (329)
T 3fvz_A 323 K 323 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=5.3e-15 Score=140.08 Aligned_cols=267 Identities=10% Similarity=0.062 Sum_probs=175.7
Q ss_pred CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccc
Q psy17682 135 SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTL 204 (490)
Q Consensus 135 ~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~ 204 (490)
.++.+.+|+.. +++ ....+..+..+ .++|+|+| ++++++. .++.|.+||..+++.+..+
T Consensus 29 ~d~~v~v~D~~-----t~~---~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i 97 (361)
T 2oiz_A 29 TESRVHVYDYT-----NGK---FLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEI 97 (361)
T ss_dssp GGCEEEEEETT-----TCC---EEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEE
T ss_pred ccCeEEEEECC-----CCe---EEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEE
Confidence 46789999874 232 23345555555 89999998 6777765 3678999999888776654
Q ss_pred ccceeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC-CEEEEEeCCC
Q psy17682 205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG-SKLLTTCKDK 280 (490)
Q Consensus 205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg 280 (490)
..+.... .+......++++|+|+ +|+++.. ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||
T Consensus 98 ~~~~~~~-~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 98 SLPPKRV-QGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp EECTTBC-CBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTS
T ss_pred EcCcccc-ccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCC
Confidence 3210000 0234567899999996 6666653 68999999999998887 552 2 23346677866 6788889999
Q ss_pred eEEEEeCCC-Cceeeeee----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc--------C
Q psy17682 281 KMRIINPRT-GAIEEEAV----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD--------T 347 (490)
Q Consensus 281 ~i~iwd~~~-~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~--------~ 347 (490)
.+.+|++.. ++...... .+.......+.+++++..++..+ .++.+.++|+...... ...... .
T Consensus 174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 174 GLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS---YYGNVYSADFSGDEVK-VDGPWSLLNDEDKAK 249 (361)
T ss_dssp SEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB---TTSEEEEEECSSSSCE-EEEEEESCCHHHHHT
T ss_pred cEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe---CCCeEEEEEecCCCce-ecccccccCcccccc
Confidence 999999865 44432211 01111122333466666665555 4678999998754321 111100 0
Q ss_pred ---CCceeeeeecCCCCeEEEEec----------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec-
Q psy17682 348 ---SNGVMFPLYDPDTNLVYLCGK----------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC- 413 (490)
Q Consensus 348 ---~~~i~~~~~s~~~~~l~~~g~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~- 413 (490)
..+...++|+|+++.+|++.. ..+.|.+||+.+.+ .+..+..+. ..+++|+|||+++++++
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~----~v~~i~~~~-p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ----RVARIPGRD-ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE----EEEEEECTT-CCEEEEETTTTEEEEECS
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc----EEEEEecCC-eeEEEECCCCCEEEEeCC
Confidence 112234789999999987654 13589999999986 444455555 99999999998877664
Q ss_pred ceeEEEEecCCC
Q psy17682 414 EIGRFFRLNNSG 425 (490)
Q Consensus 414 ~~~~~~~~~~~~ 425 (490)
+.+.+|++.++.
T Consensus 325 ~~v~v~D~~t~~ 336 (361)
T 2oiz_A 325 GNVNVYDISQPE 336 (361)
T ss_dssp SCEEEEECSSSS
T ss_pred CeEEEEECCCCc
Confidence 578889888873
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=9.8e-15 Score=136.45 Aligned_cols=273 Identities=9% Similarity=-0.006 Sum_probs=179.3
Q ss_pred CCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECC
Q psy17682 65 KEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPP 144 (490)
Q Consensus 65 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~ 144 (490)
.+++|.++|..+++.... +...... .........+.+..+. +.++...++.+.+++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~--------------i~~~~n~---~~lg~~~~~i~~~~~~------lyv~~~~~~~v~viD~ 71 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENE--------------VFYRANG---FKLGDVAQSMVIRDGI------GWIVVNNSHVIFAIDI 71 (328)
T ss_dssp CCBEEEEEETTTTEEECS--------------HHHHHHS---SCCBSCEEEEEEETTE------EEEEEGGGTEEEEEET
T ss_pred CCceEEEEECCCCEEhhh--------------hHhhhcC---cccCccceEEEEECCE------EEEEEcCCCEEEEEEC
Confidence 389999999998763221 0000000 0001123445554432 3444556789999988
Q ss_pred CCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe
Q psy17682 145 PSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH 224 (490)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 224 (490)
. +++ .+..+. .......+++++++ .++++...++.|.+||..+++....+.... ..+.......+++
T Consensus 72 ~-----t~~---~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~--~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 72 N-----TFK---EVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPD--MDMESGSTEQMVQ- 138 (328)
T ss_dssp T-----TCC---EEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTT--CCTTTCBCCCEEE-
T ss_pred c-----ccE---EEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCC--ccccCCCcceEEE-
Confidence 4 222 223333 34678899998877 555555578999999998887655443210 0011114456667
Q ss_pred eCCCCEEEEEe-CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----------CeEEEEeCCCCcee
Q psy17682 225 PTAQNVLLTAG-SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----------KKMRIINPRTGAIE 293 (490)
Q Consensus 225 p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~ 293 (490)
.++ .++++.. .++.|.++|+.+++.+..+.. ......++++|+|++++++..+ +.|.++|..+++..
T Consensus 139 ~~~-~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 139 YGK-YVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp ETT-EEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred ECC-EEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 343 3445443 488999999999998888774 3445789999999877776654 78999999999887
Q ss_pred eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEe----c
Q psy17682 294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCG----K 368 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g----~ 368 (490)
..+....+..+..++++|+++.+.++. . .|.+||..+.+.... .... .......++++|++..|+++. .
T Consensus 217 ~~~~~~~g~~p~~la~~~d~~~lyv~~---~--~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 217 KQFKFKLGDWPSEVQLNGTRDTLYWIN---N--DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp EEEECCTTCCCEEEEECTTSCEEEEES---S--SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred EEEecCCCCCceeEEEecCCCEEEEEc---c--EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 777644333589999999998888774 2 788999987653211 1111 134578899999777777887 6
Q ss_pred CCCeEEEEEecCCC
Q psy17682 369 GDSVIRYFEITAEP 382 (490)
Q Consensus 369 ~dg~i~iwd~~~~~ 382 (490)
.++.|.+||.. ++
T Consensus 291 ~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 291 QQGIVYRYSPQ-GK 303 (328)
T ss_dssp SEEEEEEECTT-CC
T ss_pred cCCEEEEECCC-CC
Confidence 78999999998 66
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=3.6e-14 Score=130.64 Aligned_cols=241 Identities=10% Similarity=0.035 Sum_probs=163.5
Q ss_pred cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
...+..+.....+++|+|++..+++++..++.|..|+..++ ...+ ..+...+.+++++|++. ++++...+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-------~~~~~~~~~l~~~~dg~-l~v~~~~~ 89 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-------MHPSHHQNGHCLNKQGH-LIACSHGL 89 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-------ESSCSSEEEEEECTTCC-EEEEETTT
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-------ECCCCCcceeeECCCCc-EEEEecCC
Confidence 34555667788999999998448888889999999998766 3332 23567789999999995 77766667
Q ss_pred CcEEEEECCCCeeEEEEecC----CCcEEEEEEcCCCCEEEEE----e-------------CCCeEEEEeCCCCceeeee
Q psy17682 238 NNVAIWNVGTGEIMIQIECH----PDIVYSASWNWDGSKLLTT----C-------------KDKKMRIINPRTGAIEEEA 296 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~ 296 (490)
+.|.+||..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++. ..+
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~ 167 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAP 167 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEe
Confidence 89999999888754433211 2345689999999988873 2 13467777765 443 333
Q ss_pred eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC---eEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682 297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP---IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI 373 (490)
Q Consensus 297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i 373 (490)
..+.. ....++|+|+|+.+++.+ .++.|.+|++...... .... ......+..++++++|+++ ++. ++.|
T Consensus 168 ~~~~~-~~~gi~~s~dg~~lv~~~---~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~-v~~--~~~v 239 (296)
T 3e5z_A 168 IRDRV-KPNGLAFLPSGNLLVSDT---GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIW-ASA--GDGV 239 (296)
T ss_dssp ECCCS-SEEEEEECTTSCEEEEET---TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEE-EEE--TTEE
T ss_pred ecCCC-CCccEEECCCCCEEEEeC---CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEE-EEc--CCeE
Confidence 33333 378999999999885554 4678999998732222 1111 1233456789999999866 544 7889
Q ss_pred EEEEecCCCCeeEEeeeeeCCCceeeEEE-eeCceeEEeecceeEEEEecCC
Q psy17682 374 RYFEITAEPPFVHYINTFQTPDPQRGIGM-MPKRGCDVNSCEIGRFFRLNNS 424 (490)
Q Consensus 374 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~-sp~~~~l~~~~~~~~~~~~~~~ 424 (490)
.+|+.. ++ .+..+..+..+.+++| +|++..|..++.. .+|++...
T Consensus 240 ~~~~~~-g~----~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~ 285 (296)
T 3e5z_A 240 HVLTPD-GD----ELGRVLTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETN 285 (296)
T ss_dssp EEECTT-SC----EEEEEECSSCCCEEEEESTTSCEEEEEETT-EEEEEECS
T ss_pred EEECCC-CC----EEEEEECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcc
Confidence 999986 44 2333333333899999 5888766655443 56665543
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=5.3e-15 Score=152.35 Aligned_cols=249 Identities=8% Similarity=-0.035 Sum_probs=163.6
Q ss_pred ceeecccCCeeEEEECCCCCCEEEEE--eCCCcEEEEECCCCCcccccccceeeecccccCEE---------EEEEe--e
Q psy17682 159 ALVGGHKGPVLDIAWSPHDDNVIASG--SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVG---------LVLWH--P 225 (490)
Q Consensus 159 ~~~~~h~~~V~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--p 225 (490)
..+.+|...+..++|++++ .++++. +.++...||....+..... +..+...+. ...|+ |
T Consensus 17 ~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~SP 88 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRADGAEES-------ALPAPWNVRNRVFEYSGFPWAGVPRP 88 (662)
T ss_dssp HHHHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTTSCEEE-------SSCTTCCBCCCGGGTCCCCEEEECCS
T ss_pred HHHhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCCCCcce-------eCCCCccccccccccCCccceeeeec
Confidence 3567899999999999865 566666 5688999999644433333 223444444 56666 9
Q ss_pred CCCCEEEEEe-CCCcEEEEECC--C-CeeEEEEec-----CCCcEEEEEEcCCCCEEEEEeCC----------CeEEEEe
Q psy17682 226 TAQNVLLTAG-SDNNVAIWNVG--T-GEIMIQIEC-----HPDIVYSASWNWDGSKLLTTCKD----------KKMRIIN 286 (490)
Q Consensus 226 ~~~~~l~s~~-~dg~v~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd 286 (490)
+|+.+|+.++ .+..|.++++. . ++ ...+.. |...+..++|+|||+.|++++.+ ..|++||
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 9974144443 35677777765 2 43 445554 56678999999999999998876 5899999
Q ss_pred CCC------Cceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCC-----ceeEEEEecCC-CCC--CCeEEEeccCCCce
Q psy17682 287 PRT------GAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKM-----SERQYSLRAPD-HLD--EPIVMVELDTSNGV 351 (490)
Q Consensus 287 ~~~------~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~-----~~~~i~iwd~~-~~~--~~~~~~~~~~~~~i 351 (490)
+.+ ++.. .+. .+.. .+..+.|+|||+.|+.++.+. ....|++||+. ++. ....+. ..+...+
T Consensus 168 ~~~~~~~~~~~~~-~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~ 244 (662)
T 3azo_A 168 LDGSAAADRSAVR-ELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAI 244 (662)
T ss_dssp TTSTTTTCGGGSE-ESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCE
T ss_pred CCCCccccCCcee-EEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceE
Confidence 988 5443 333 3333 477889999999998776322 12689999998 441 222222 2335678
Q ss_pred eeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCC--C-----ceeeEEEeeCceeEEeec-ceeEEEEe
Q psy17682 352 MFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTP--D-----PQRGIGMMPKRGCDVNSC-EIGRFFRL 421 (490)
Q Consensus 352 ~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~--~-----~i~~~~~sp~~~~l~~~~-~~~~~~~~ 421 (490)
..+.|+|||+ +++++..++ .|++||+.+++ . ..+...... . .+..++|+|++.+++++. +..++|.+
T Consensus 245 ~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~-~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (662)
T 3azo_A 245 AQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA-A-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGIL 321 (662)
T ss_dssp EEEEECTTSC-EEEEECTTSSCEEEEECTTTCC-E-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEE
T ss_pred cceEECCCCe-EEEEECCCCCeEEEEEECCCCc-e-eecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEE
Confidence 9999999999 447777788 55555554554 2 222211110 0 156789999998877664 45577755
Q ss_pred c
Q psy17682 422 N 422 (490)
Q Consensus 422 ~ 422 (490)
+
T Consensus 322 d 322 (662)
T 3azo_A 322 D 322 (662)
T ss_dssp E
T ss_pred E
Confidence 4
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=3e-12 Score=117.61 Aligned_cols=237 Identities=11% Similarity=0.009 Sum_probs=158.4
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..+.++++.++| .++++...++.|..|+.. ++. ..+. +......+.++++.+++. ++++...++.|.+||.
T Consensus 57 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 57 AKVMCLTISSDG-EVWFTENAANKIGRITKK-GII-KEYT-----LPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD 127 (299)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-EEEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT
T ss_pred CceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE-EEEe-----CCCcCCCceeeEECCCCC-EEEEecCCceEEEECC
Confidence 568889999987 677777668889999975 332 2221 112445789999999884 7777767789999998
Q ss_pred CCCeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682 246 GTGEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324 (490)
Q Consensus 246 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 324 (490)
+++.... .......+..+++.++++.+++...++.|..||. +++............+..++++++|.++++.. .
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~ 202 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEI---I 202 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET---T
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEcc---C
Confidence 5554322 2234567899999999988887777789999998 66554321112223478999999999777664 4
Q ss_pred eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682 325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP 404 (490)
Q Consensus 325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 404 (490)
.+.|.+||. ++. ............+..++++++|+.+ ++...++.|..||. +++ + ...........+.++++ +
T Consensus 203 ~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~d~-~g~-~-~~~~~~~~~~~~~~i~~-~ 275 (299)
T 2z2n_A 203 GNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLW-FTEWGANKIGRLTS-NNI-I-EEYPIQIKSAEPHGICF-D 275 (299)
T ss_dssp TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTTEEEEEET-TTE-E-EEEECSSSSCCEEEEEE-C
T ss_pred CceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEE-EeccCCceEEEECC-CCc-e-EEEeCCCCCCccceEEe-c
Confidence 678999998 443 2222222234568899999999854 66656788999998 332 2 22211122356889999 8
Q ss_pred CceeEEee-cceeEEEEecC
Q psy17682 405 KRGCDVNS-CEIGRFFRLNN 423 (490)
Q Consensus 405 ~~~~l~~~-~~~~~~~~~~~ 423 (490)
++.+.++. .+.+..++..+
T Consensus 276 ~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 276 GETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp SSCEEEEETTTEEEEEEEC-
T ss_pred CCCEEEEecCCcEEEEEcCc
Confidence 88877765 33334444443
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=8.5e-14 Score=130.06 Aligned_cols=270 Identities=13% Similarity=0.049 Sum_probs=179.1
Q ss_pred CCceEEEECCCCCCCCcccCCCCcce-e--ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeee
Q psy17682 135 SQQALSILPPPSTAPNTGRINADHAL-V--GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211 (490)
Q Consensus 135 ~~g~i~v~~~~~~~~~~~~~~~~~~~-~--~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 211 (490)
.++.|.+++.. +++....+.. . .........+.+.. +.++++...++.|.+||..+++.+..+.
T Consensus 15 ~~~~l~~~d~~-----t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~------ 81 (328)
T 3dsm_A 15 SNATLSYYDPA-----TCEVENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT------ 81 (328)
T ss_dssp CCBEEEEEETT-----TTEEECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE------
T ss_pred CCceEEEEECC-----CCEEhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC------
Confidence 47889999884 3332221110 0 01224467787753 3677777778999999999998776652
Q ss_pred cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC-----CcEEEEEEcCCCCEEEEEe--CCCeEEE
Q psy17682 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP-----DIVYSASWNWDGSKLLTTC--KDKKMRI 284 (490)
Q Consensus 212 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~i 284 (490)
.......+++++++ .++++...++.|.+||..+++....+.... .....+++ . +..++++. .++.|.+
T Consensus 82 --~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 82 --GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILK 156 (328)
T ss_dssp --CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEE
T ss_pred --CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEE
Confidence 34568899999998 465555578999999999998887776322 14567777 3 44455444 4889999
Q ss_pred EeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc-------eeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682 285 INPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS-------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD 357 (490)
Q Consensus 285 wd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~-------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 357 (490)
+|+.+++...++.... ....++++|+|++++++..+.. .+.|.++|..+.+... ............++|+
T Consensus 157 iD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~-~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 157 IDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK-QFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE-EEECCTTCCCEEEEEC
T ss_pred EECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE-EEecCCCCCceeEEEe
Confidence 9999998887776432 3678899999998777652100 2689999998754221 2222223467899999
Q ss_pred CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEee-CceeEEee------cceeEEEEecCCCceEE
Q psy17682 358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMP-KRGCDVNS------CEIGRFFRLNNSGLCQV 429 (490)
Q Consensus 358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp-~~~~l~~~------~~~~~~~~~~~~~~~~~ 429 (490)
|+++.|+++.+ .|.+||..+++... ...... .....+++++| ++.+.++. .+.+.+|+.. ++.+..
T Consensus 234 ~d~~~lyv~~~---~v~~~d~~t~~~~~--~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 234 GTRDTLYWINN---DIWRMPVEADRVPV--RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE 307 (328)
T ss_dssp TTSCEEEEESS---SEEEEETTCSSCCS--SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred cCCCEEEEEcc---EEEEEECCCCceee--eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence 99999976543 89999998876211 111111 34678999999 56666665 3355666666 554554
Q ss_pred EE
Q psy17682 430 VS 431 (490)
Q Consensus 430 i~ 431 (490)
+.
T Consensus 308 i~ 309 (328)
T 3dsm_A 308 FY 309 (328)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=3.6e-14 Score=133.00 Aligned_cols=241 Identities=9% Similarity=0.013 Sum_probs=165.9
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..|.++.|++++ ..++..+.++.++.|. ++... .+..+...+.+++|+|++. +++++..++.|.+||.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~ 73 (333)
T 2dg1_A 6 QDLPTLFYSGKS-NSAVPIISESELQTIT---AEPWL-------EISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINP 73 (333)
T ss_dssp CCCCBCCSCGGG-GCSSCCCCGGGSCEEE---CEEEE-------EEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECT
T ss_pred cccceeeecCCc-cceeEEeecccCcccc---cceeE-------EEeccCccccCcEECCCCC-EEEEECCCCEEEEEeC
Confidence 457788899876 5666667788889983 22212 2344666789999999985 7778888899999999
Q ss_pred CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEe
Q psy17682 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~ 320 (490)
.+++.......+...+.+++++|+|+++++...+ +.|.+||..++.....+. ......+..++++|+|+++++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 74 ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp TTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred CCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 8887655444466789999999999988877666 689999998876543332 11233488999999999887664
Q ss_pred CC---CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC-CCCeeE----Eeeeee
Q psy17682 321 SK---MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA-EPPFVH----YINTFQ 392 (490)
Q Consensus 321 ~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~-~~~~~~----~~~~~~ 392 (490)
.. ...+.|..+|..+... .... .....+..++|+|+|+.|+++.+.++.|++|++.+ +..+.. ....+.
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~ 230 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTV-TPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT 230 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCE-EEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC
T ss_pred cccccCCCceEEEEeCCCCEE-EEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC
Confidence 11 0135677777664332 1111 12234788999999998877777789999999974 332211 111111
Q ss_pred CCCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682 393 TPDPQRGIGMMPKRGCDVNS--CEIGRFFRL 421 (490)
Q Consensus 393 ~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~ 421 (490)
....+.+++++++|.+.++. .+.+.+|+.
T Consensus 231 ~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 231 GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 12367889999999887776 345666666
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=4.9e-12 Score=125.99 Aligned_cols=329 Identities=11% Similarity=0.032 Sum_probs=209.9
Q ss_pred ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682 58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ 137 (490)
Q Consensus 58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g 137 (490)
.++++...+++|.++|..+++. ...+.. ......+.+||+. + .+.+++.++
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v------------------~~~i~~------g~~p~~v~~SpDG--r---~lyv~~~dg 218 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEI------------------KTVLDT------GYAVHISRLSASG--R---YLFVIGRDG 218 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCE------------------EEEEEC------SSCEEEEEECTTS--C---EEEEEETTS
T ss_pred eEEEEeCCCCeEEEEECCCCeE------------------EEEEeC------CCCccceEECCCC--C---EEEEEcCCC
Confidence 6778888899999999988652 111111 0134578999996 2 333456788
Q ss_pred eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEEC----CCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec-
Q psy17682 138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWS----PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL- 212 (490)
Q Consensus 138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~----p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~- 212 (490)
.|.+|++.. .+.+ ....+... .....++|+ |+|+..+++...+++|.++|..+.+.+..+........
T Consensus 219 ~V~viD~~~---~t~~---~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 219 KVNMIDLWM---KEPT---TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp EEEEEETTS---SSCC---EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred eEEEEECCC---CCCc---EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 999999830 0111 22333332 235789999 69854455556669999999998887766543211111
Q ss_pred --cccc-CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy17682 213 --YHQR-RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIIN 286 (490)
Q Consensus 213 --~~~~-~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd 286 (490)
.|.. .+..+..++++..++++...+|.|.++|..+.+. +..+. .......+.|+|++++++++. .++.|.++|
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 1223 6888999998775677777789999999876543 22332 445677899999999887766 578999999
Q ss_pred CCCCceeeeeee-cCCCce-eEE-EEeCC-CcEEEEEeCCCceeEEEEecCCCCCC----CeEEEeccCC-Cceeeeeec
Q psy17682 287 PRTGAIEEEAVC-HEGSKA-TRA-IYLKS-GLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVELDTS-NGVMFPLYD 357 (490)
Q Consensus 287 ~~~~~~~~~~~~-~~~~~~-~~~-~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~~~~-~~i~~~~~s 357 (490)
+.+++.+..+.. ...... ... .++|+ +.+++++.- .++.|.++|..+... ...+..+... .+-..+..+
T Consensus 371 ~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~ 448 (567)
T 1qks_A 371 TKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH 448 (567)
T ss_dssp TTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred CCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeC
Confidence 999987776654 211111 122 26887 445454421 357899999887321 1223333222 333557789
Q ss_pred CCCCeEEEEecC------CCeEEEEEecCC-----CCeeEEeee-----e-eCCCceeeEEEeeCceeEEee-------c
Q psy17682 358 PDTNLVYLCGKG------DSVIRYFEITAE-----PPFVHYINT-----F-QTPDPQRGIGMMPKRGCDVNS-------C 413 (490)
Q Consensus 358 ~~~~~l~~~g~~------dg~i~iwd~~~~-----~~~~~~~~~-----~-~~~~~i~~~~~sp~~~~l~~~-------~ 413 (490)
|+++++++.... ...|.++|+.+. ......+.. + ..+..+..+.|+|+|..+..+ .
T Consensus 449 p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~ 528 (567)
T 1qks_A 449 PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQE 528 (567)
T ss_dssp TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSC
T ss_pred CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCC
Confidence 999999875521 358999999977 322223321 1 124578999999999766554 2
Q ss_pred ceeEEEEecCCC
Q psy17682 414 EIGRFFRLNNSG 425 (490)
Q Consensus 414 ~~~~~~~~~~~~ 425 (490)
+.+.+++..+.+
T Consensus 529 ~~i~v~D~~t~~ 540 (567)
T 1qks_A 529 SALVVVDDKTLE 540 (567)
T ss_dssp CEEEEEETTTTE
T ss_pred CcEEEEECCCce
Confidence 466666666655
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=2.8e-15 Score=144.04 Aligned_cols=243 Identities=9% Similarity=-0.016 Sum_probs=156.0
Q ss_pred ccCCeeEEEECCCCCCEEEEEeC-C--CcEEEEECCCCCcccccccceeeecccccC-EEEEEEeeCCCCEEEEEeCCCc
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSE-D--CVVKVWQIPDGGISRTLTEPVVDLLYHQRR-VGLVLWHPTAQNVLLTAGSDNN 239 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~s~~~dg~ 239 (490)
|...+.+++|+|+| ++|+.... + ..|.+||+.+++.... ..+... ...+.|+|+++ .|+.++.++.
T Consensus 34 ~~~~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~~l--------~~~~~~~~~~~~~spdg~-~l~~~~~~~~ 103 (396)
T 3c5m_A 34 HRNYFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAVQL--------TEGKGDNTFGGFISTDER-AFFYVKNELN 103 (396)
T ss_dssp ECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEEEC--------CCSSCBCTTTCEECTTSS-EEEEEETTTE
T ss_pred cceeeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEEEe--------ecCCCCccccceECCCCC-EEEEEEcCCc
Confidence 34457888999999 56555543 3 3688889877654322 112222 23378999996 8888888889
Q ss_pred EEEEECCCCeeEEEEecCCCcEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEeCCCCceeee
Q psy17682 240 VAIWNVGTGEIMIQIECHPDIVYS-------------------ASWNWDGSKLLTT-----CKDKKMRIINPRTGAIEEE 295 (490)
Q Consensus 240 v~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~ 295 (490)
|++||+.+++.......+...... +.|+|+++.++.. ..+..|++||+.+++....
T Consensus 104 l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 104 LMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee
Confidence 999999988766555544432222 3567777766654 3567899999998876554
Q ss_pred eeecCCCceeEEEEeC-CCcEEEEEeCCCce---eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-
Q psy17682 296 AVCHEGSKATRAIYLK-SGLIFTTGFSKMSE---RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD- 370 (490)
Q Consensus 296 ~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d- 370 (490)
.. +.. .+..+.|+| ++..|+..+....+ ..|.+||+..... ..+........+..+.|+|||++|++++..+
T Consensus 184 ~~-~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (396)
T 3c5m_A 184 HQ-DTA-WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG 260 (396)
T ss_dssp EE-ESS-CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred cc-CCc-ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCC
Confidence 43 333 388999999 78877666532111 5788898875432 1111101123477899999999885554322
Q ss_pred ---CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEEeec------------------ceeEEEEecCCC
Q psy17682 371 ---SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDVNSC------------------EIGRFFRLNNSG 425 (490)
Q Consensus 371 ---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~------------------~~~~~~~~~~~~ 425 (490)
+.|++||+.+++. ..+.... ... +.|+| ||.+++.+. ..+.+|++.++.
T Consensus 261 ~~~~~l~~~d~~~g~~--~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 261 QTDRVIYKANPETLEN--EEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp TCCEEEEEECTTTCCE--EEEEECC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred CccceEEEEECCCCCe--EEeeeCC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 4599999988762 2222221 233 89999 998877632 456667776665
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=1.3e-13 Score=142.49 Aligned_cols=247 Identities=11% Similarity=0.020 Sum_probs=159.6
Q ss_pred cccCCeeEEEECCCCCCEEE-----EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIA-----SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~-----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
+|...+.+++||||| ++|+ .|+.+..|++||+.+++.+.... +. ......++|+|+|+ .|+.++.|
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~-----~~--~~~~~~~~wspDg~-~l~~~~~d 188 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV-----IE--GGKYATPKWTPDSK-GFYYEWLP 188 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCSSCC-----BS--CCTTCCCEECTTSS-EEEEEECC
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcCCcc-----cC--cccccceEEecCCC-EEEEEEec
Confidence 566679999999999 6666 33445689999999987641100 11 11126789999996 78888777
Q ss_pred Cc-------------EEEEECCCCe----eEEEEecCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCceeeee
Q psy17682 238 NN-------------VAIWNVGTGE----IMIQIECHPDIVYSASWNWDGSKLLTTCKDK----KMRIINPRTGAIEEEA 296 (490)
Q Consensus 238 g~-------------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~ 296 (490)
.. |++|++.+++ .+.....+...+..+.|+|||++|+.++.++ .|+++|..+++. ..+
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l 267 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLL 267 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEe
Confidence 65 9999998776 3333334556789999999999998887666 788887765543 344
Q ss_pred eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682 297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR 374 (490)
Q Consensus 297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~ 374 (490)
..+... .....+ ++|.+++.+..+..++.|.+||+.+... ...+........+..++|+ ++ .++++...|+..+
T Consensus 268 ~~~~~~-~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 268 VKGVGA-KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSE 343 (695)
T ss_dssp EECSSC-CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEE
T ss_pred ecCCCc-eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEE
Confidence 444443 444555 5666444433233468999999987542 1222221223457778887 44 5558888999988
Q ss_pred EEEec-CCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682 375 YFEIT-AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG 425 (490)
Q Consensus 375 iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~ 425 (490)
||.+. +++ ..+.+. +.....+..++++|++..++.. . ..+.+|++.+++
T Consensus 344 l~~~~~~g~-~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 344 VRVATLKGK-PVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEETTCC-EEEECC-CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEeCCCC-eeEEec-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88876 343 222221 2223567888999988655522 1 256677777666
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=1.6e-13 Score=129.39 Aligned_cols=242 Identities=12% Similarity=0.106 Sum_probs=153.4
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC---C--cEEEEECCCCCcccccccceee
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED---C--VVKVWQIPDGGISRTLTEPVVD 210 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~~~~ 210 (490)
.+.|.++++. .++ ...+ ..+..++|+|+| +.|+.++.+ + .|.+|++.+++....
T Consensus 42 ~~~l~~~d~~-----~~~----~~~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l------- 100 (347)
T 2gop_A 42 ENTIVIENLK-----NNA----RRFI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKI------- 100 (347)
T ss_dssp EEEEEEEETT-----TCC----EEEE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEE-------
T ss_pred cceEEEEeCC-----CCc----eEEc----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEE-------
Confidence 4567778774 121 1222 568899999999 677766543 3 377788876654322
Q ss_pred ecccccCEEEEEEeeCCCCEEEEEeC---------------------------CCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682 211 LLYHQRRVGLVLWHPTAQNVLLTAGS---------------------------DNNVAIWNVGTGEIMIQIECHPDIVYS 263 (490)
Q Consensus 211 ~~~~~~~v~~~~~~p~~~~~l~s~~~---------------------------dg~v~iwd~~~~~~~~~~~~~~~~v~~ 263 (490)
..+.. +..++|+|+++ .|+.++. ...|.+||+.+++.+..+.. . .+..
T Consensus 101 -~~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~ 175 (347)
T 2gop_A 101 -LEAKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSS 175 (347)
T ss_dssp -EEESE-EEEEEECTTSS-EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCE
T ss_pred -EcCCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Cccc
Confidence 11333 89999999996 5665542 25799999998887455554 3 7889
Q ss_pred EEEcCCCCEEEEEeCCC---------eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC-----ceeEEE
Q psy17682 264 ASWNWDGSKLLTTCKDK---------KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM-----SERQYS 329 (490)
Q Consensus 264 ~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~-----~~~~i~ 329 (490)
++|+|+| +++++..++ .|+++| +++. ..+..+ . .+..+ +|+|+.|+.++.+. ....|.
T Consensus 176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~-~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~ 247 (347)
T 2gop_A 176 GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-V-SFYAV--DSDGERILLYGKPEKKYMSEHNKLY 247 (347)
T ss_dssp EEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-E-SEEEE--EECSSCEEEEECCSSSCCCSSCEEE
T ss_pred ccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEeccC-c-ceeeE--CCCCCEEEEEEccccCCccccceEE
Confidence 9999999 777776542 455555 4443 334333 2 24443 99999887766432 135788
Q ss_pred EecCCCCCCCeEEEeccCCCceee-eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682 330 LRAPDHLDEPIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC 408 (490)
Q Consensus 330 iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~ 408 (490)
+|| +++ .......+...+.. +.|+ ++ . +++++.++.++|| +.+++ .. .+ ..+...+.+++|+| +.+
T Consensus 248 ~~d--~~~--~~~l~~~~~~~~~~~~~~s-dg-~-~~~~~~~~~~~l~-~~~g~-~~-~~--~~~~~~v~~~~~s~-~~~ 314 (347)
T 2gop_A 248 IYD--GKE--VMGILDEVDRGVGQAKIKD-GK-V-YFTLFEEGSVNLY-IWDGE-IK-PI--AKGRHWIMGFDVDE-IVV 314 (347)
T ss_dssp EEC--SSC--EEESSTTCCSEEEEEEEET-TE-E-EEEEEETTEEEEE-EESSS-EE-EE--ECSSSEEEEEEESS-SEE
T ss_pred EEC--CCc--eEeccccCCcccCCccEEc-Cc-E-EEEEecCCcEEEE-EcCCc-eE-EE--ecCCCeEEeeeeeC-cEE
Confidence 888 322 11112233456775 8999 88 4 4788889999999 88544 22 22 23456789999999 533
Q ss_pred EEeec-ce-eEEEEecCCC
Q psy17682 409 DVNSC-EI-GRFFRLNNSG 425 (490)
Q Consensus 409 l~~~~-~~-~~~~~~~~~~ 425 (490)
++.+. .. .++|.+. ++
T Consensus 315 ~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 315 YLKETATRLRELFTWD-GE 332 (347)
T ss_dssp EEEECSSSCCEEEEES-SS
T ss_pred EEEcCCCChHHheEeC-Cc
Confidence 33332 22 3788887 44
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=7.3e-14 Score=144.41 Aligned_cols=202 Identities=10% Similarity=0.016 Sum_probs=127.8
Q ss_pred eEEEECCCCCCEEEEEeCCCc-------------EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682 169 LDIAWSPHDDNVIASGSEDCV-------------VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG 235 (490)
Q Consensus 169 ~~~~~~p~~~~~l~s~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 235 (490)
..++|+||| +.|+.++.|.. |++|++.++..... .+.....+...+.++.|+|+|+ +|+.++
T Consensus 171 ~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~---lv~~~~~~~~~~~~~~~SpDG~-~l~~~~ 245 (695)
T 2bkl_A 171 ATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT---VVHERTGDPTTFLQSDLSRDGK-YLFVYI 245 (695)
T ss_dssp CCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE---EEECCCCCTTCEEEEEECTTSC-CEEEEE
T ss_pred cceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce---EEEecCCCCEEEEEEEECCCCC-EEEEEE
Confidence 467899988 67777777765 99999987753211 1111223556789999999997 555554
Q ss_pred CCC----cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCce--eeeeeecC-CCcee
Q psy17682 236 SDN----NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC---KDKKMRIINPRTGAI--EEEAVCHE-GSKAT 305 (490)
Q Consensus 236 ~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~-~~~~~ 305 (490)
.++ .|.+|+..+++. ..+..+...+....+ ++|.+++.+. .++.|.+||+.+++. ...+..+. ...+.
T Consensus 246 ~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL 323 (695)
T ss_dssp EETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred eCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence 444 677777655543 444445556666666 5666444433 257899999987753 23343332 44477
Q ss_pred EEEEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCCCceeeeeecCCCCeEEEEec---CCCeEEEEEecCC
Q psy17682 306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---GDSVIRYFEITAE 381 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~dg~i~iwd~~~~ 381 (490)
.+.++ ++.++++.. .++..++|.+.. +.. ......+....+..+.++|+++.++++.+ ..+.|++||+.++
T Consensus 324 ~~~~~-~~~lv~~~~---~dg~~~l~~~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 324 SVSIV-GGHLSLEYL---KDATSEVRVATLKGKP-VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EEEEE-TTEEEEEEE---ETTEEEEEEEETTCCE-EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEEEE-CCEEEEEEE---ECCEEEEEEEeCCCCe-eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 78888 677777776 455555554331 221 11122233456788899999988765543 3478999999887
Q ss_pred C
Q psy17682 382 P 382 (490)
Q Consensus 382 ~ 382 (490)
+
T Consensus 399 ~ 399 (695)
T 2bkl_A 399 K 399 (695)
T ss_dssp C
T ss_pred c
Confidence 6
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=3.1e-13 Score=124.38 Aligned_cols=248 Identities=12% Similarity=0.038 Sum_probs=165.8
Q ss_pred CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682 34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA 113 (490)
Q Consensus 34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 113 (490)
...+..+..+.....+++|+|+++.+++++..++.|..|+..++ .
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---------------------------------- 61 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---------------------------------- 61 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----------------------------------
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----------------------------------
Confidence 34455666778889999999999448888888899999987652 1
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw 193 (490)
. .+..+...+.+++++|+| +++++...++.|.+|
T Consensus 62 --------------------------~-------------------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 62 --------------------------S-------------------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQ 95 (296)
T ss_dssp --------------------------E-------------------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEE
T ss_pred --------------------------E-------------------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEE
Confidence 0 111234568899999988 677777777899999
Q ss_pred ECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEE----e-------------CCCcEEEEECCCCeeEEEEe
Q psy17682 194 QIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTA----G-------------SDNNVAIWNVGTGEIMIQIE 255 (490)
Q Consensus 194 d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~----~-------------~dg~v~iwd~~~~~~~~~~~ 255 (490)
|..+++....... ..+ ....+..++++|+|. ++++. + ..+.|..++.. ++ +..+.
T Consensus 96 d~~~g~~~~~~~~----~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~ 168 (296)
T 3e5z_A 96 REPGGEWESIADS----FEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI 168 (296)
T ss_dssp CSTTCCEEEEECE----ETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE
T ss_pred cCCCCcEEEEeec----cCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee
Confidence 9877764322110 111 123467899999995 77763 2 12456666654 44 34445
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce---eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682 256 CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAI---EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331 (490)
Q Consensus 256 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw 331 (490)
.+......++|+|+++.+++.+.++.|++||+. +++. ...+.. ....+..++++++|+++++. ++.|.+|
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~-----~~~v~~~ 242 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA-----GDGVHVL 242 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE-----TTEEEEE
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc-----CCeEEEE
Confidence 566778999999999988777778999999987 4544 223322 22236789999999977665 4579999
Q ss_pred cCCCCCCCeEEEeccCCCceeeeee-cCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 332 APDHLDEPIVMVELDTSNGVMFPLY-DPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 332 d~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
|.. ++. ..... .+.. +.+++| +|+++.|+++. .+ .+.-++..+.
T Consensus 243 ~~~-g~~-~~~~~-~~~~-~~~~~f~~~d~~~L~v~t-~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 243 TPD-GDE-LGRVL-TPQT-TSNLCFGGPEGRTLYMTV-ST-EFWSIETNVR 287 (296)
T ss_dssp CTT-SCE-EEEEE-CSSC-CCEEEEESTTSCEEEEEE-TT-EEEEEECSCC
T ss_pred CCC-CCE-EEEEE-CCCC-ceeEEEECCCCCEEEEEc-CC-eEEEEEcccc
Confidence 986 332 22222 2223 888999 68999986554 44 3444555444
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=3.6e-13 Score=139.59 Aligned_cols=206 Identities=9% Similarity=0.012 Sum_probs=136.4
Q ss_pred eeEEEECCCCCCEEEEEeCCCc----------------EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682 168 VLDIAWSPHDDNVIASGSEDCV----------------VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231 (490)
Q Consensus 168 V~~~~~~p~~~~~l~s~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 231 (490)
+.+++|+||| +.|+.++.++. |++|++.+++....+ +.....|...+..+.|+|+|+ .|
T Consensus 173 ~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~---v~~~~~~~~~~~~~~~SpDg~-~l 247 (710)
T 2xdw_A 173 FSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL---CAEFPDEPKWMGGAELSDDGR-YV 247 (710)
T ss_dssp SCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE---EECCTTCTTCEEEEEECTTSC-EE
T ss_pred cceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE---EeccCCCCeEEEEEEEcCCCC-EE
Confidence 4567888887 66666666654 999999876532111 111222455688999999997 55
Q ss_pred EEEeC-----CCcEEEEECCC------Ce-eEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCce--e
Q psy17682 232 LTAGS-----DNNVAIWNVGT------GE-IMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAI--E 293 (490)
Q Consensus 232 ~s~~~-----dg~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~ 293 (490)
+.++. +..|.+||+.+ ++ ....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. .
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 326 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW 326 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 55543 56899999976 43 35556656655554 488899887776653 3699999987742 3
Q ss_pred eeeeecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec---C
Q psy17682 294 EEAVCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---G 369 (490)
Q Consensus 294 ~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~ 369 (490)
..+..+.. ..+..+.|++++.++++...++ ...|.+|++.++..... ... +...+..+.++|+++.++++.+ .
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g-~~~l~~~~~~~g~~~~~-l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~ 403 (710)
T 2xdw_A 327 KVLVPEHEKDVLEWVACVRSNFLVLCYLHDV-KNTLQLHDLATGALLKI-FPL-EVGSVVGYSGQKKDTEIFYQFTSFLS 403 (710)
T ss_dssp EEEECCCSSCEEEEEEEETTTEEEEEEEETT-EEEEEEEETTTCCEEEE-ECC-CSSEEEEEECCTTCSEEEEEEECSSC
T ss_pred eeccCCCCCCeEEEEEEEcCCEEEEEEEECC-EEEEEEEECCCCCEEEe-cCC-CCceEEEEecCCCCCEEEEEEeCCCC
Confidence 44444433 3477888998888888776432 34677888755542222 222 3456788999999987765543 3
Q ss_pred CCeEEEEEecCCC
Q psy17682 370 DSVIRYFEITAEP 382 (490)
Q Consensus 370 dg~i~iwd~~~~~ 382 (490)
.+.|++||+.+++
T Consensus 404 P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 404 PGIIYHCDLTKEE 416 (710)
T ss_dssp CCEEEEEETTSSS
T ss_pred CCEEEEEECCCCc
Confidence 4789999998876
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=2.9e-13 Score=140.30 Aligned_cols=247 Identities=12% Similarity=0.088 Sum_probs=159.9
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCC-C----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSED-C----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
+|...+..++||||| ++|+.+..+ | .|++||+.+++..... + ....+.+++|+|+|+ .|+.++.+
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~------~--~~~~~~~~~wspDg~-~l~~~~~~ 191 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDV------L--ERVKFSCMAWTHDGK-GMFYNAYP 191 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEE------E--EEECSCCEEECTTSS-EEEEEECC
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCccc------c--cCcccceEEEEeCCC-EEEEEEEC
Confidence 455578899999999 666655443 3 8999999988764321 1 122366899999996 77777776
Q ss_pred Cc----------------EEEEECCCCee--EEEEe--cCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEeCCC---
Q psy17682 238 NN----------------VAIWNVGTGEI--MIQIE--CHPDIVYSASWNWDGSKLLTTCK-----DKKMRIINPRT--- 289 (490)
Q Consensus 238 g~----------------v~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~--- 289 (490)
+. |++|++.+++. ...+. .+...+..+.|+|||++|+.++. +..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 55 99999987752 22233 34556889999999999888765 56899999986
Q ss_pred ---Cc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCC-CceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCe
Q psy17682 290 ---GA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNL 362 (490)
Q Consensus 290 ---~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~ 362 (490)
+. ....+..+... .. ..|+++|..|+..+.. .....|.+||+.+... ...+........+..+.|++++.+
T Consensus 272 ~~~~~~~~~~l~~~~~~-~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 349 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEG-EY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL 349 (710)
T ss_dssp SSCSSCCCEEEECSSSS-CE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred ccCCccceEEeeCCCCc-EE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE
Confidence 43 34555555443 33 3588888877665532 2356899999987542 122222111125778888865554
Q ss_pred EEEEecCCCe--EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682 363 VYLCGKGDSV--IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG 425 (490)
Q Consensus 363 l~~~g~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~ 425 (490)
+++...|+. |++|++.+++. .+.+.. +...+.+++++|++..++.. . ..+..|++.+++
T Consensus 350 -v~~~~~~g~~~l~~~~~~~g~~-~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 350 -VLCYLHDVKNTLQLHDLATGAL-LKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -EEEEEETTEEEEEEEETTTCCE-EEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -EEEEEECCEEEEEEEECCCCCE-EEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 477878875 45556656652 223321 24568889999988544422 2 255666666554
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=3.6e-13 Score=122.01 Aligned_cols=200 Identities=10% Similarity=0.039 Sum_probs=140.9
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..+.+++++++| +++++.. ++.|.+||...... ..+. ......+.++++.+++. ++++...++.|.+|+.
T Consensus 67 ~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~-~~~~------~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~ 136 (270)
T 1rwi_B 67 YQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ-TVLP------FDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAA 136 (270)
T ss_dssp CSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC-EECC------CCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred CCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE-eeee------cCCcCCCcceEECCCCC-EEEEECCCCEEEEEEC
Confidence 346788999987 5666555 88999999765433 2111 11235689999999985 7777777889999986
Q ss_pred CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE 325 (490)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 325 (490)
.+.............+.+++++++|+++++...++.|.+||.............. ..+..++++++|.++++.. .+
T Consensus 137 ~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~---~~ 212 (270)
T 1rwi_B 137 GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH---NT 212 (270)
T ss_dssp TCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET---TT
T ss_pred CCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC---CC
Confidence 6554333222233467889999999977777778899999988766443322222 3488999999998777765 46
Q ss_pred eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+.|.+|+...... ......+...+..++++++|+ |+++...++.|+++++...+
T Consensus 213 ~~v~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 213 NQVVKLLAGSTTS--TVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp SCEEEECTTCSCC--EECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGG
T ss_pred CcEEEEcCCCCcc--eeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCcc
Confidence 7899999875432 122222335688999999997 55788889999999998765
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=4.1e-13 Score=121.74 Aligned_cols=226 Identities=11% Similarity=0.083 Sum_probs=168.0
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccc-cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH 257 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 257 (490)
++|++++.|+.|.+||.++++.+..+.. +. ..+.++.+.|+|. +++ +.++.|..||. +++.+.++..+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~-------~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPL-------EKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEEC-------CTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCC-------CccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 7999999999999999989988776542 33 4678999999995 777 45788999999 89999998864
Q ss_pred -CCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeeeecCC-----CceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682 258 -PDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGAIEEEAVCHEG-----SKATRAIYLKSGLIFTTGFSKMSERQYSL 330 (490)
Q Consensus 258 -~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~~~~~~~~~~i~i 330 (490)
...+.++.+.++|+.+++.+. ++.+..+|. +++.+.++..... .....+...++|.++++.. .++.|..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~v~~ 150 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---ATSEVRE 150 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---TTTEEEE
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec---CCCEEEE
Confidence 357889999999999999887 888988886 6777766652211 1245567889999999887 5789999
Q ss_pred ecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--C--CCceeeEEEeeCc
Q psy17682 331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--T--PDPQRGIGMMPKR 406 (490)
Q Consensus 331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~--~~~i~~~~~sp~~ 406 (490)
||.. ++.... .........+.+.++|+.+ +++..++.|..+|..+++.+.+ +.... . -..+.+++..++|
T Consensus 151 ~d~~-G~~~w~---~~~~~~~~~~~~~~~g~~~-v~~~~~~~v~~~d~~tG~~~w~-~~~~~~~~~~l~~~~~~~~~~~G 224 (276)
T 3no2_A 151 IAPN-GQLLNS---VKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRR-VNANDIEGVQLFFVAQLFPLQNG 224 (276)
T ss_dssp ECTT-SCEEEE---EECSSCCCEEEECTTSCEE-EECBTTSEEEEECTTTCCEEEE-EEGGGSBSCCCSEEEEEEECTTS
T ss_pred ECCC-CCEEEE---EECCCCccceeEcCCCCEE-EEeCCCCeEEEEeCcCCcEEEE-ecCCCCCCccccccccceEcCCC
Confidence 9988 653322 2333456677888999988 6677778999999998883322 22111 1 1236888899999
Q ss_pred eeEEeec----------ceeEEEEecCCC
Q psy17682 407 GCDVNSC----------EIGRFFRLNNSG 425 (490)
Q Consensus 407 ~~l~~~~----------~~~~~~~~~~~~ 425 (490)
.++++.. +..+++.++..+
T Consensus 225 ~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 225 GLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp CEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CEEEEeccCccccccccCCceEEEECCCC
Confidence 8888762 245788886544
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=1.6e-12 Score=129.44 Aligned_cols=231 Identities=12% Similarity=0.086 Sum_probs=167.8
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC--CCeeEEEEec
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG--TGEIMIQIEC 256 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~ 256 (490)
.++++...+++|.++|..+++.+..+. ....+..+.|+|+++ ++++++.|+.|.+||+. +++.+.++..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~--------~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLD--------TGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEE--------CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEe--------CCCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 677777889999999999998776653 334567999999996 78888899999999995 7888888874
Q ss_pred CCCcEEEEEEc----CCCCEEEEEeC-CCeEEEEeCCCCceeeeeee----------cCCCceeEEEEeCCCcEEEEEeC
Q psy17682 257 HPDIVYSASWN----WDGSKLLTTCK-DKKMRIINPRTGAIEEEAVC----------HEGSKATRAIYLKSGLIFTTGFS 321 (490)
Q Consensus 257 ~~~~v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~s~~~~~l~~~~~ 321 (490)
......++|+ |+|+++++++. ++++.++|..+.+.+.++.. |....+..+..++++..++....
T Consensus 239 -G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 239 -GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 4457899999 69998887764 58999999999998887652 12334778888888665555442
Q ss_pred CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeE
Q psy17682 322 KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGI 400 (490)
Q Consensus 322 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~ 400 (490)
..+.|.++|....... ....+........+.|+|+|++++++...++.|.++|+.+++ +...+.. -..+.+-+++
T Consensus 318 --~~g~v~~vd~~~~~~~-~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 318 --ETGKILLVDYTDLNNL-KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp --TTTEEEEEETTCSSEE-EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE-EEEEEECSSSSBCCTTCE
T ss_pred --CCCeEEEEecCCCccc-eeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc-EEEEEeccCcCCCCccce
Confidence 4789999998765422 233334445577889999999998888788999999999986 3333322 1112222444
Q ss_pred E-EeeC-ceeEEee---cceeEEEEecC
Q psy17682 401 G-MMPK-RGCDVNS---CEIGRFFRLNN 423 (490)
Q Consensus 401 ~-~sp~-~~~l~~~---~~~~~~~~~~~ 423 (490)
. ++|+ +.+.+++ ++.+.+++..+
T Consensus 394 ~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 394 NFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred eeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 4 4787 4444443 35788888876
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=6.4e-13 Score=120.37 Aligned_cols=236 Identities=10% Similarity=0.019 Sum_probs=158.1
Q ss_pred CeeEEEECCCCCCEEE-EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 167 PVLDIAWSPHDDNVIA-SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
...+++++++| ++++ +...++.|.+|+..+..... +. ..+...+.++++.+++. ++++.. ++.|.+||.
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~-~~------~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTV-LP------FNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAA 94 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EE-CC------CCSCCSCCCEEECTTCC-EEEEET-TTEEEEECT
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccce-Ee------eCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeC
Confidence 77899999988 6666 54778899999875543221 11 11334678899999985 666655 889999998
Q ss_pred CCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682 246 GTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324 (490)
Q Consensus 246 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 324 (490)
..... ..+. .....+..++++++|+++++...++.|.+|+..+........... ..+..++++++|+++++.. .
T Consensus 95 ~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~---~ 169 (270)
T 1rwi_B 95 GSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT---D 169 (270)
T ss_dssp TCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG---G
T ss_pred CCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC---C
Confidence 76543 3333 233578999999999988777778899999876554332222221 2378899999999777765 4
Q ss_pred eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682 325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP 404 (490)
Q Consensus 325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp 404 (490)
.+.|.+||...... ..........+..++++++|. |+++...++.|.+|+....... .. ...+...+.+++++|
T Consensus 170 ~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~--~~-~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 170 NNRVVKLEAESNNQ--VVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTST--VL-PFTGLNTPLAVAVDS 243 (270)
T ss_dssp GTEEEEECTTTCCE--EECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCE--EC-CCCSCSCEEEEEECT
T ss_pred CCEEEEEecCCCce--EeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcce--ee-ccCCCCCceeEEECC
Confidence 67899999876431 111122235678999999995 4477777889999998765421 11 112224689999999
Q ss_pred CceeEEeecc--eeEEEEecC
Q psy17682 405 KRGCDVNSCE--IGRFFRLNN 423 (490)
Q Consensus 405 ~~~~l~~~~~--~~~~~~~~~ 423 (490)
+|.+.++... .++++++..
T Consensus 244 ~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 244 DRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TCCEEEEEGGGTEEEEECCCG
T ss_pred CCCEEEEECCCCEEEEEcCCC
Confidence 9987777644 455555443
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.58 E-value=1e-12 Score=123.67 Aligned_cols=262 Identities=13% Similarity=0.058 Sum_probs=158.2
Q ss_pred ceeeeEEeccCCCceEEee--------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682 45 RRVGLVLWHPTAQNVLLTA--------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI 116 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~--------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 116 (490)
..+....+ +|..++++. +.++.|.+||+.++.. ..+ ..+..+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~----------------~~l------------~~~~~~ 64 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR----------------RFI------------ENATMP 64 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE----------------EEE------------ESCEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce----------------EEc------------ccCCCe
Confidence 44566666 663333332 2367899999887541 000 136678
Q ss_pred EeccccccceEEEEEeeC--CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--------
Q psy17682 117 TISEDYVKEFKEEIRKLK--SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE-------- 186 (490)
Q Consensus 117 ~~s~~~~~~~~~~~~~~~--~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~-------- 186 (490)
+|||++ +.+....... ....|.++++. .++ ...+..+.. +..++|+|+| +.|+.++.
T Consensus 65 ~~SpDg--~~la~~~~~~~~~~~~l~~~~~~-----~g~----~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 65 RISPDG--KKIAFMRANEEKKVSEIWVADLE-----TLS----SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDF 131 (347)
T ss_dssp EECTTS--SEEEEEEEETTTTEEEEEEEETT-----TTE----EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC----
T ss_pred EECCCC--CEEEEEEeccCCCcceEEEEECC-----CCc----eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCc
Confidence 999995 4444433333 23346677764 222 122223334 9999999998 66666553
Q ss_pred -------------------CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-------cE
Q psy17682 187 -------------------DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-------NV 240 (490)
Q Consensus 187 -------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-------~v 240 (490)
...|.+||+.+++.+..+ .. . .+..+.|+|++ +++++..++ ..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l-------~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF-------EK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEE-------EE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeee-------cC-C-CcccccCCCCe--EEEEEecccccccccccc
Confidence 257899998877542322 12 2 67889999998 677665542 34
Q ss_pred EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeeeeecCCCceeE-EEEeC
Q psy17682 241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--------KKMRIINPRTGAIEEEAVCHEGSKATR-AIYLK 311 (490)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~s~ 311 (490)
.+|.+.+++. ..+..+ ..+..+ +|+|+.|+.++.+ ..|++|| +++.......+.. .+.. +.|+
T Consensus 201 ~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~-~~~~~~~~s- 272 (347)
T 2gop_A 201 DIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDR-GVGQAKIKD- 272 (347)
T ss_dssp EEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCS-EEEEEEEET-
T ss_pred cEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCc-ccCCccEEc-
Confidence 4544445554 334334 455544 9999988887754 3688888 5554333333333 3665 8899
Q ss_pred CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE-EEEEec
Q psy17682 312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI-RYFEIT 379 (490)
Q Consensus 312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i-~iwd~~ 379 (490)
++ +++++. .++.+++| +.++ ... ....+...+..++|+| ..+ ++++.++.. .+|.+.
T Consensus 273 dg-~~~~~~---~~~~~~l~-~~~g-~~~--~~~~~~~~v~~~~~s~--~~~-~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 273 GK-VYFTLF---EEGSVNLY-IWDG-EIK--PIAKGRHWIMGFDVDE--IVV-YLKETATRLRELFTWD 330 (347)
T ss_dssp TE-EEEEEE---ETTEEEEE-EESS-SEE--EEECSSSEEEEEEESS--SEE-EEEECSSSCCEEEEES
T ss_pred Cc-EEEEEe---cCCcEEEE-EcCC-ceE--EEecCCCeEEeeeeeC--cEE-EEEcCCCChHHheEeC
Confidence 88 777776 46788888 7733 222 2223456788999999 555 555556554 777776
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=1.9e-11 Score=112.14 Aligned_cols=238 Identities=12% Similarity=0.029 Sum_probs=162.9
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.+...+.++++.++| +++++...++.|.+||.. ++. ..+. ...+...+.++++.+++. ++++...++.|..
T Consensus 12 ~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 12 NQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKI-TEYP-----LPTPDAKVMCLTISSDGE-VWFTENAANKIGR 82 (299)
T ss_dssp SSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCE-EEEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred CcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCe-EEec-----CCcccCceeeEEECCCCC-EEEeCCCCCeEEE
Confidence 455689999999988 677766667899999977 443 2221 112446789999999985 7777666788999
Q ss_pred EECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682 243 WNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 243 wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 320 (490)
||.. ++. ..+. .....+.++++.++++++++...++.|..||. +++............+..++++++|+++++..
T Consensus 83 ~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 83 ITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp ECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred ECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 9986 432 3332 24567899999999988887777889999998 55543322221233488999999998887765
Q ss_pred CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682 321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI 400 (490)
Q Consensus 321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 400 (490)
..+.|..||. ++. ............+..++++++|+.. ++...++.|.+||. +++ +. ..........+.++
T Consensus 160 ---~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~~~-~g~-~~-~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 160 ---QNNAIGRITE-SGD-ITEFKIPTPASGPVGITKGNDDALW-FVEIIGNKIGRITT-SGE-IT-EFKIPTPNARPHAI 230 (299)
T ss_dssp ---TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCC-EE-EEECSSTTCCEEEE
T ss_pred ---CCCEEEEEcC-CCc-EEEeeCCCCCCcceeEEECCCCCEE-EEccCCceEEEECC-CCc-EE-EEECCCCCCCceeE
Confidence 4578999998 433 1222122233457889999998855 66666789999998 654 22 22111233568899
Q ss_pred EEeeCceeEEeec--ceeEEEEe
Q psy17682 401 GMMPKRGCDVNSC--EIGRFFRL 421 (490)
Q Consensus 401 ~~sp~~~~l~~~~--~~~~~~~~ 421 (490)
+++++|.+.++.. +.+..|+.
T Consensus 231 ~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EECSTTCEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEeccCCceEEEECC
Confidence 9999998777753 34555555
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=7e-11 Score=108.44 Aligned_cols=234 Identities=9% Similarity=0.004 Sum_probs=157.8
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..+.++++.++| +++++...++.|..||.. ++. ..+. .......+.++++.+++. ++++...++.|..+|.
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGF-TEYP-----LPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-EEEE-----CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred CcceeEEECCCC-CEEEEecCCCeEEEECCC-CCe-EEec-----CCCCCCCCccceECCCCC-EEEEccCCCeEEEECC
Confidence 467889999987 677776667889999976 543 2221 122346689999999885 7777666789999998
Q ss_pred CCCeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682 246 GTGEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKM 323 (490)
Q Consensus 246 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~ 323 (490)
. ++.... +......+..+++.++++++++...++.|..+|. +++... +.. .....+..++++++|.++++..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~--- 206 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEI--- 206 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET---
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEcc---
Confidence 7 554422 2334567899999999997776666789999998 555443 321 2223488999999998877664
Q ss_pred ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682 324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM 403 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 403 (490)
..+.|.+++.. +. ............+..++++++|+.. ++...++.|..|+. +++ +. ..........+.+++++
T Consensus 207 ~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~-~~-~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 207 MGNKIGRITTT-GE-ISEYDIPTPNARPHAITAGKNSEIW-FTEWGANQIGRITN-DNT-IQ-EYQLQTENAEPHGITFG 280 (300)
T ss_dssp TTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTTEEEEECT-TSC-EE-EEECCSTTCCCCCEEEC
T ss_pred CCCEEEEEcCC-Cc-EEEEECCCCCCCceEEEECCCCCEE-EeccCCCeEEEECC-CCc-EE-EEECCccCCccceeEeC
Confidence 35678999883 22 1222122234557899999999854 66666789999998 443 22 12111123567899999
Q ss_pred eCceeEEeecceeEEEEec
Q psy17682 404 PKRGCDVNSCEIGRFFRLN 422 (490)
Q Consensus 404 p~~~~l~~~~~~~~~~~~~ 422 (490)
++|.+.++.. . +++.++
T Consensus 281 ~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 281 KDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp TTSCEEEECS-S-EEEEEE
T ss_pred CCCCEEEEcc-C-ceEEeC
Confidence 9998777665 3 665543
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=4.1e-12 Score=115.17 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=134.0
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CCcEEEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVAIWN 244 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~v~iwd 244 (490)
..+.++.++|+| ++++ +.++.|..||. +++.+..+.. .....+.++.+.++|. ++++.+. ++.|..+|
T Consensus 37 ~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~------~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 37 WECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAA------PAGCEMQTARILPDGN-ALVAWCGHPSTILEVN 105 (276)
T ss_dssp CCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEEC------CTTCEEEEEEECTTSC-EEEEEESTTEEEEEEC
T ss_pred CCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcC------CCCccccccEECCCCC-EEEEecCCCCEEEEEe
Confidence 357788999988 7777 35778999998 7887776543 1234678899999995 7777776 77888888
Q ss_pred CCCCeeEEEEecC------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682 245 VGTGEIMIQIECH------PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 245 ~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 318 (490)
. +++.+.++... ......++..++|+++++...++.|..||.. ++.+.++.... .+..+...++|.++++
T Consensus 106 ~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~~~~~~~g~~~v~ 181 (276)
T 3no2_A 106 M-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG--TPFSSAFLDNGDCLVA 181 (276)
T ss_dssp T-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS--CCCEEEECTTSCEEEE
T ss_pred C-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC--CccceeEcCCCCEEEE
Confidence 6 78877776521 1234456788999999999999999999998 99888887543 2566788899999988
Q ss_pred EeCCCceeEEEEecCCCCCCCeEEEecc----CCCceeeeeecCCCCeEEEEe
Q psy17682 319 GFSKMSERQYSLRAPDHLDEPIVMVELD----TSNGVMFPLYDPDTNLVYLCG 367 (490)
Q Consensus 319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~g 367 (490)
+. .++.|..+|..+++....+.... ....+..+...++|+.+ ++.
T Consensus 182 ~~---~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~-v~~ 230 (276)
T 3no2_A 182 CG---DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY-ICN 230 (276)
T ss_dssp CB---TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE-EEE
T ss_pred eC---CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE-EEe
Confidence 87 45689999999776443333211 11226777888888887 444
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.50 E-value=8e-12 Score=130.09 Aligned_cols=245 Identities=12% Similarity=0.001 Sum_probs=152.8
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
+|...+..++||||| ++|+.++.+ ..|++||+.+++.+... . +...+..++|+|+ + .|+.++.+
T Consensus 160 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~------~--~~~~~~~~~wspD-~-~l~~~~~~ 228 (741)
T 1yr2_A 160 DGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADE------L--KWVKFSGLAWLGN-D-ALLYSRFA 228 (741)
T ss_dssp ---EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEE------E--EEEESCCCEESTT-S-EEEEEECC
T ss_pred CCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCcc------C--CCceeccEEEECC-C-EEEEEEec
Confidence 454578899999999 666665433 35999999988764320 0 1222357899999 6 56665555
Q ss_pred Cc--------------EEEEECCCCee--EEEEe--cCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC--ce
Q psy17682 238 NN--------------VAIWNVGTGEI--MIQIE--CHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTG--AI 292 (490)
Q Consensus 238 g~--------------v~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~ 292 (490)
+. |++|++.+++. ...+. .+...+..+.|+|||++|+..+.++ .|++||+.++ +.
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred CcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 43 89999977652 22333 2334588999999999988877544 8999999877 31
Q ss_pred eeeeeecCCCceeEEEEeCCCcEEEEEeCCC-ceeEEEEecCCCCC-CCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682 293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKM-SERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~-~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d 370 (490)
...+..+... .... ++|+|..|+..+... ..+.|.+||+.+.. ....+. ..+...+..+.++ +..++++...|
T Consensus 309 ~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~--~~~lv~~~~~d 383 (741)
T 1yr2_A 309 VTALIPDLKA-QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA--GNRLFASYIHD 383 (741)
T ss_dssp CEEEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE--BTEEEEEEEET
T ss_pred cEEecCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE--CCEEEEEEEEC
Confidence 4445444443 3333 358888777666432 36779999987642 212222 2233345566776 45566888889
Q ss_pred CeEEEEEec-CCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682 371 SVIRYFEIT-AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG 425 (490)
Q Consensus 371 g~i~iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~ 425 (490)
+..+||.+. +++ ..+.+. +.....+..++++|++..++.. . ..+.+|++.+++
T Consensus 384 g~~~l~~~~~~g~-~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 384 AKSQVLAFDLDGK-PAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEETTSC-EEEECB-CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CEEEEEEEeCCCC-ceeecc-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 988888776 343 222222 2234568899999998654422 1 255666665544
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=1.1e-10 Score=110.51 Aligned_cols=261 Identities=11% Similarity=0.014 Sum_probs=164.4
Q ss_pred eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCcccccccc
Q psy17682 138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLTEP 207 (490)
Q Consensus 138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~ 207 (490)
.+.+++.. +++. +..+.....+ .++++|+| ++++.+. .++.|.+||..+.+.+..+..+
T Consensus 48 ~v~v~D~~-----t~~~---~~~i~~g~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~ 116 (373)
T 2mad_H 48 QQWVLDAG-----SGSI---LGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP 116 (373)
T ss_pred EEEEEECC-----CCeE---EEEecCCCCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC
Confidence 77888874 2222 2233322333 99999999 6666664 3678999999888776654321
Q ss_pred -eeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC-CEEEEEeCCCeE
Q psy17682 208 -VVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG-SKLLTTCKDKKM 282 (490)
Q Consensus 208 -~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i 282 (490)
..... +......+.|+|+|+ +|+++.. ++.|.++| .+++.+.. +.. .. ++.+.|++ +.+++.+.||.+
T Consensus 117 ~~~~~~-~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~ 189 (373)
T 2mad_H 117 DAPRFD-VGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGL 189 (373)
T ss_pred Cccccc-cCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCE
Confidence 00000 112346899999997 6666553 57899999 99998877 652 22 24455655 466677789999
Q ss_pred EEEeCCCCceeeeee-----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----------
Q psy17682 283 RIINPRTGAIEEEAV-----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD----------- 346 (490)
Q Consensus 283 ~iwd~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~----------- 346 (490)
.++|. +++...... ...........+.+++..++..+ ..+.+.+.|+....... ...+.
T Consensus 190 ~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 190 AKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV---YSGKILQADISAAGATN-KAPIDALSGGRKADTW 264 (373)
T ss_pred EEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc---CCceEEEEeccCCcceE-eeeeeecCCcccccce
Confidence 99999 877663322 11111123345666644333333 35688888886543211 11111
Q ss_pred CCCceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---c
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---C 413 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~ 413 (490)
...+...+.++|+++.+|++.. .++.|.++|+.+.+ .+..+..+....+++|+|||+ +++++ +
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----TSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE----EEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 1123445789999999977653 24689999999886 444445555789999999998 55554 3
Q ss_pred ceeEEEEecCCC
Q psy17682 414 EIGRFFRLNNSG 425 (490)
Q Consensus 414 ~~~~~~~~~~~~ 425 (490)
+.+.++++.+.+
T Consensus 341 ~~V~ViD~~t~~ 352 (373)
T 2mad_H 341 EVLHIYDAGAGD 352 (373)
T ss_pred CeEEEEECCCCC
Confidence 477888888776
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=1.8e-11 Score=117.67 Aligned_cols=237 Identities=13% Similarity=0.028 Sum_probs=155.9
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC--cEEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN--NVAIW 243 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg--~v~iw 243 (490)
.....|+|+|++ +++++...++.|++||..++....... ...... ++|+|++. .|+++..++ .|.++
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~--------~~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHP--------GFKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVY 199 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEE--------TCCBCB-CEECTTSS-EEEEEBSSTTCEEEEE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeec--------cCCCCc-eeEecCCC-cEEEEecCCCceEEEE
Confidence 468899999988 677777778999999987765433211 122233 89999996 777777755 78889
Q ss_pred ECCCCeeEEEE----ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eeecCCCcee-EEEEeCC-C
Q psy17682 244 NVGTGEIMIQI----ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE----AVCHEGSKAT-RAIYLKS-G 313 (490)
Q Consensus 244 d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~-~~~~s~~-~ 313 (490)
+...+.....+ ......+.+++++|++..|+.+..++.|+.||..++..... ..+....... .++|+|+ +
T Consensus 200 d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 200 MKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp EGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred EcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 88765543344 21456678999999555555577788999999987763322 1122222123 8999995 6
Q ss_pred cEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-------------CCCceeeeeecCCCCeEEEEec-CCCeEEEEEec
Q psy17682 314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-------------TSNGVMFPLYDPDTNLVYLCGK-GDSVIRYFEIT 379 (490)
Q Consensus 314 ~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~g~-~dg~i~iwd~~ 379 (490)
.++++.. ..+.|+.|+.... ...+.... .-.....++++|+|+ |+++-+ .++.|+.|++.
T Consensus 280 ~lyv~d~---~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 280 NFYMSDQ---NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp EEEEEET---TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETT
T ss_pred EEEEEeC---CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECC
Confidence 6666554 5678999987743 11111111 013467899999998 557777 88999999987
Q ss_pred CCCCeeEEeeeee-------------CCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682 380 AEPPFVHYINTFQ-------------TPDPQRGIGMMPKRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 380 ~~~~~~~~~~~~~-------------~~~~i~~~~~sp~~~~l~~~~~~~~~~~~ 421 (490)
++. +. .+.... .-....+++++|++.+.++.....++.++
T Consensus 354 ~G~-v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 354 DGY-VS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TTE-EE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCE-EE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 764 22 221110 01347899999999888877654455443
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.49 E-value=2.6e-11 Score=112.32 Aligned_cols=246 Identities=10% Similarity=0.041 Sum_probs=156.3
Q ss_pred eecccCCeeEEEECCCCCCEEEE-------EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC-CCCEEE
Q psy17682 161 VGGHKGPVLDIAWSPHDDNVIAS-------GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLL 232 (490)
Q Consensus 161 ~~~h~~~V~~~~~~p~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~ 232 (490)
+...-....+++|++++ .++++ +..++.|.+||..+++... +..+ ...++...+.+++++++ +. +++
T Consensus 13 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~--~~~~~~~~~~~i~~~~~~g~-l~v 87 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKP--EVNGYGGIPAGCQCDRDANQ-LFV 87 (314)
T ss_dssp EECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE-EECC--EETTEECCEEEEEECSSSSE-EEE
T ss_pred hhccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEec--ccCCCCCCCceEEEecCCCc-EEE
Confidence 34444567899999887 67777 5678899999987776432 1111 01224567899999999 63 444
Q ss_pred EEeCCCcEEEEECCCCeeEEE-Eec----CCCcEEEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCce
Q psy17682 233 TAGSDNNVAIWNVGTGEIMIQ-IEC----HPDIVYSASWNWDGSKLLTTCKD---------------KKMRIINPRTGAI 292 (490)
Q Consensus 233 s~~~dg~v~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~ 292 (490)
+ +..+.|.+||.. ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++.
T Consensus 88 ~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 A-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp E-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred E-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 4 444579999988 665432 221 12347899999999888777655 578888876 554
Q ss_pred eeeeeecCCCceeEEEEe----CCCcEEEEEeCCCceeEEEEecCC-CCCC--CeEEEeccCC--CceeeeeecCCCCeE
Q psy17682 293 EEEAVCHEGSKATRAIYL----KSGLIFTTGFSKMSERQYSLRAPD-HLDE--PIVMVELDTS--NGVMFPLYDPDTNLV 363 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~~i~iwd~~-~~~~--~~~~~~~~~~--~~i~~~~~s~~~~~l 363 (490)
..... +.. ....++++ ++++.+.++.. .++.|.+||.. .+.. .......... .....++++++|+.+
T Consensus 165 ~~~~~-~~~-~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 165 IQVDT-AFQ-FPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp EEEEE-EES-SEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred EEecc-CCC-CcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence 33222 222 26788999 99975544431 36789999876 2211 0111222222 457789999999776
Q ss_pred EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEeecc--eeEEEEec
Q psy17682 364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNSCE--IGRFFRLN 422 (490)
Q Consensus 364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~--~~~~~~~~ 422 (490)
++...++.|.+||..+++.. ..+. .....+.+++|+|++. +.++... .+..|++.
T Consensus 241 -v~~~~~~~i~~~d~~~g~~~-~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 241 -VANWGSSHIEVFGPDGGQPK-MRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp -EEEETTTEEEEECTTCBSCS-EEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred -EEEcCCCEEEEEcCCCCcEe-EEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 66666889999998866522 2221 1225789999999998 4455544 34444443
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.48 E-value=1.1e-11 Score=115.98 Aligned_cols=272 Identities=12% Similarity=0.073 Sum_probs=172.3
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCcccccc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLT 205 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~ 205 (490)
++.+.+++.. +.+ .+..+..-..+ .++++|+| ++++++. .++.|.+||..+++.+..+.
T Consensus 58 ~~~V~ViD~~-----t~~---v~~~I~vG~~P--~va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~ 126 (386)
T 3sjl_D 58 VTQQFVIDGE-----AGR---VIGMIDGGFLP--NPVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE 126 (386)
T ss_dssp SEEEEEEETT-----TTE---EEEEEEECSSC--EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECC-----CCe---EEEEEECCCCC--cEEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence 6789999884 222 22333333344 49999999 5554443 36789999999988777654
Q ss_pred cceeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy17682 206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMR 283 (490)
Q Consensus 206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 283 (490)
.+...-.........+.++|+|+ +++++.. ++.|.++|+.+++.+.++... + + ...+....+.+++.+.||++.
T Consensus 127 v~~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~ 202 (386)
T 3sjl_D 127 LPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLA 202 (386)
T ss_dssp ETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEE
T ss_pred CCCccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEE
Confidence 21100000112456789999997 5665543 689999999999999988632 2 2 223333446777888999999
Q ss_pred EEeCCC-CceeeeeeecC----CCceeEEEEe-CCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEecc--------C
Q psy17682 284 IINPRT-GAIEEEAVCHE----GSKATRAIYL-KSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELD--------T 347 (490)
Q Consensus 284 iwd~~~-~~~~~~~~~~~----~~~~~~~~~s-~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~--------~ 347 (490)
+.++.+ ++...+..... ........|. ++|+++.+.. ++.+++.|+....... ....+. .
T Consensus 203 ~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~----~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 203 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY----TGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT----TSEEEEEECTTSSCEECCCEESSCHHHHHTTEE
T ss_pred EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC----CCEEEEEECCCCcceeecceecccccccccccc
Confidence 999976 55432221111 1111224554 6887766553 6789999987643211 111000 1
Q ss_pred CCceeeeeecCCCCeEEEEecC---------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---cc
Q psy17682 348 SNGVMFPLYDPDTNLVYLCGKG---------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---CE 414 (490)
Q Consensus 348 ~~~i~~~~~s~~~~~l~~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~~ 414 (490)
..+...++++++++.+|++-.. .+.|.+.|+.+.+ .+..+..+..+.+++++||++ .++++ ++
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k----v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE----RLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECSSSSCEEEEEETTTT
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe----EEEEEECCCCcceEEECCCCCeEEEEEcCCCC
Confidence 1234567889999999876431 3579999999988 344444445789999999986 54443 45
Q ss_pred eeEEEEecCCCceEEE
Q psy17682 415 IGRFFRLNNSGLCQVV 430 (490)
Q Consensus 415 ~~~~~~~~~~~~~~~i 430 (490)
.+.+++..+++.+..+
T Consensus 355 ~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 355 TLYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEe
Confidence 7889999888755444
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.48 E-value=1.1e-11 Score=129.06 Aligned_cols=183 Identities=11% Similarity=0.023 Sum_probs=112.8
Q ss_pred cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCCC--eeEEEEecCCCcE
Q psy17682 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGTG--EIMIQIECHPDIV 261 (490)
Q Consensus 189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~~--~~~~~~~~~~~~v 261 (490)
.|++|++.++.....+ +.....+...+.++.|+|+|+ .|+..+.+ ..|.+||+.++ +....+..+...+
T Consensus 244 ~v~~~~lgt~~~~~~l---v~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQP---VFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp EEEEEETTSCGGGCEE---EECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred EEEEEECCCCchhCEE---EeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 4889998766432111 111122334588999999997 55555543 38999999877 3145555455555
Q ss_pred EEEEEcCCCCEEEEEeCC----CeEEEEeCCCCc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE--EEEecCC
Q psy17682 262 YSASWNWDGSKLLTTCKD----KKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ--YSLRAPD 334 (490)
Q Consensus 262 ~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~--i~iwd~~ 334 (490)
.... +|+|+.|+..+.+ +.|.+||+.++. ....+..+....+..+.++ ++.++++.. .++. |.++++.
T Consensus 320 ~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~---~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 320 WDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI---HDAKSQVLAFDLD 394 (741)
T ss_dssp EEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE---ETTEEEEEEEETT
T ss_pred EEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE---ECCEEEEEEEeCC
Confidence 5553 4889888887753 459999998752 3334433333346667777 566677666 3444 4445543
Q ss_pred CCCCCeEEEeccCCCceeeeeecCCCCeEEEEec---CCCeEEEEEecCCC
Q psy17682 335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---GDSVIRYFEITAEP 382 (490)
Q Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~dg~i~iwd~~~~~ 382 (490)
. .. ......+....+..+.++|+++.++++.+ ..+.|++||+.+++
T Consensus 395 g-~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 395 G-KP-AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp S-CE-EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred C-Cc-eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 2 21 11122223456888999999987755443 45789999998775
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=2e-11 Score=113.01 Aligned_cols=252 Identities=8% Similarity=0.040 Sum_probs=158.9
Q ss_pred ecccccceeeeEEeccCCCceEEe-------eeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLT-------AGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS 111 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s-------~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (490)
.+.+.-....+++|++++ .++++ +..++.|.+||..++.... ... . .......
T Consensus 12 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------------~~~-~--~~~~~~~ 71 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------------ICK-P--EVNGYGG 71 (314)
T ss_dssp EEECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE----------------EEC-C--EETTEEC
T ss_pred hhhccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------------EEe-c--ccCCCCC
Confidence 345555677899999888 77777 6778999999987765211 000 0 0000112
Q ss_pred cCCeeEeccc-cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCC-cceee-cccCCeeEEEECCCCCCEEEEEeCC-
Q psy17682 112 TANEITISED-YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINAD-HALVG-GHKGPVLDIAWSPHDDNVIASGSED- 187 (490)
Q Consensus 112 ~v~~~~~s~~-~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~~~~-~h~~~V~~~~~~p~~~~~l~s~~~d- 187 (490)
.+..++++++ . .+..+...+.+.+|+.. ++.... ..... .+...+.+++++|+| +++++...+
T Consensus 72 ~~~~i~~~~~~g------~l~v~~~~~~l~~~d~~------g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~ 138 (314)
T 1pjx_A 72 IPAGCQCDRDAN------QLFVADMRLGLLVVQTD------GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGE 138 (314)
T ss_dssp CEEEEEECSSSS------EEEEEETTTEEEEEETT------SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCB
T ss_pred CCceEEEecCCC------cEEEEECCCCEEEEeCC------CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcc
Confidence 4567888877 4 22333334467788763 211100 00001 123468899999988 676666544
Q ss_pred --------------CcEEEEECCCCCcccccccceeeecccccCEEEEEEe----eCCCCEEEEEeCCCcEEEEECC-CC
Q psy17682 188 --------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH----PTAQNVLLTAGSDNNVAIWNVG-TG 248 (490)
Q Consensus 188 --------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~~l~s~~~dg~v~iwd~~-~~ 248 (490)
+.|..|+.. ++... +..+......++|+ |+++.++++...++.|.+||+. ++
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~--------~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g 209 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-GQMIQ--------VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA 209 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-SCEEE--------EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT
T ss_pred cccccccccccCCCCeEEEECCC-CCEEE--------eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC
Confidence 456666654 33221 11133456889999 9985345555567899999986 44
Q ss_pred e-----eEEEEecCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682 249 E-----IMIQIECHP-DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 249 ~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 322 (490)
+ ....+..+. ..+..++++++|+++++...++.|.+||..+++....+..+.. .+.+++++++|+.|.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~dg~~l~v~~~- 287 (314)
T 1pjx_A 210 KIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKPQTKTIFVTEH- 287 (314)
T ss_dssp EEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-CEEEEEECTTSSEEEEEET-
T ss_pred ccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-CceeEEECCCCCEEEEEeC-
Confidence 4 222233333 5688999999999888887889999999987777666665543 4899999999985554442
Q ss_pred CceeEEEEecCCC
Q psy17682 323 MSERQYSLRAPDH 335 (490)
Q Consensus 323 ~~~~~i~iwd~~~ 335 (490)
.++.|..+++..
T Consensus 288 -~~~~l~~~~~~~ 299 (314)
T 1pjx_A 288 -ENNAVWKFEWQR 299 (314)
T ss_dssp -TTTEEEEEECSS
T ss_pred -CCCeEEEEeCCC
Confidence 346788888764
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=3.2e-10 Score=106.05 Aligned_cols=303 Identities=13% Similarity=0.087 Sum_probs=186.7
Q ss_pred EEeccCCCceEEeeeC----CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682 50 VLWHPTAQNVLLTAGK----EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE 125 (490)
Q Consensus 50 v~~~p~~~~~l~s~~~----D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 125 (490)
....|++..++++-.. ++.|.+.|..+++. ...+.. + . .- .+++||++..-
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v------------------~~~I~v-G---~--~P-~va~spDG~~l 92 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV------------------IGMIDG-G---F--LP-NPVVADDGSFI 92 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE------------------EEEEEE-C---S--SC-EEEECTTSSCE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE------------------EEEEEC-C---C--CC-cEEECCCCCEE
Confidence 4456888556665544 78999999988651 111111 0 0 11 38999997443
Q ss_pred eEEEEEe-----eCCCceEEEECCCCCCCCcccCCCCcceee-cc------cCCeeEEEECCCCCCEEEEEeC--CCcEE
Q psy17682 126 FKEEIRK-----LKSQQALSILPPPSTAPNTGRINADHALVG-GH------KGPVLDIAWSPHDDNVIASGSE--DCVVK 191 (490)
Q Consensus 126 ~~~~~~~-----~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h------~~~V~~~~~~p~~~~~l~s~~~--dg~i~ 191 (490)
|.+.... +..++.+.+|+.. +.+ ....+. +. ...-..++|+|+| ++++++.. ++.|.
T Consensus 93 yVan~~~~r~~~G~~~~~VsviD~~-----t~~---v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 93 AHASTVFSRIARGERTDYVEVFDPV-----TLL---PTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVG 163 (386)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECTT-----TCC---EEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEE
T ss_pred EEEcccccccccCCCCCEEEEEECC-----CCe---EEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEE
Confidence 3332111 1245789999985 222 122221 10 1245678999999 66666653 68999
Q ss_pred EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEE-EEE
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVY-SAS 265 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~-~~~ 265 (490)
++|+.+++.+..+..+ + + ....|.+...+++.+.||++.+.++.+ ++.......+ ...+. ...
T Consensus 164 VID~~t~~vv~tI~v~-----g----~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 164 VVDLEGKAFKRMLDVP-----D----C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp EEETTTTEEEEEEECC-----S----E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred EEECCCCcEEEEEECC-----C----c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence 9999999887766421 1 1 123355545778888899999999876 5543322111 11221 235
Q ss_pred Ec-CCCCEEEEEeCCCeEEEEeCCCCc--eeeeee---------ecCCCceeEEEEeCCCcEEEEEeC-------CCcee
Q psy17682 266 WN-WDGSKLLTTCKDKKMRIINPRTGA--IEEEAV---------CHEGSKATRAIYLKSGLIFTTGFS-------KMSER 326 (490)
Q Consensus 266 ~~-~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~---------~~~~~~~~~~~~s~~~~~l~~~~~-------~~~~~ 326 (490)
|. ++|++++ .+.+|++++.|+.+.. ....+. +-.......+++++++..+.+... +....
T Consensus 233 ~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 233 YSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp EETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred eEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 54 5775555 5668999999997664 222221 000011345777998777666531 11246
Q ss_pred EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682 327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK 405 (490)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 405 (490)
.|.+.|+.+.+....+ .....+..+++++|++ .||++...++.|.++|..+++ .+........-+.+.+++|
T Consensus 312 ~V~viD~~t~kv~~~i---~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k----~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKF---EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE----ELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEEETTTCCEEEEE---EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC----EEEEECCCCSSCCEEEECC
T ss_pred EEEEEECCCCeEEEEE---ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc----EEEEecCCCCCceeEECCc
Confidence 8999999987643322 2234688999999997 676666779999999999998 4555555556677888877
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=8.1e-10 Score=101.28 Aligned_cols=238 Identities=9% Similarity=-0.009 Sum_probs=160.3
Q ss_pred ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
....+.++++.++| ++.++...++.|.+|+.. ++.. .+. +..+...+.++++.+++. ++++...++.|..+
T Consensus 18 ~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~-~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 18 PDSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK-EFE-----VPTPDAKVMCLIVSSLGD-IWFTENGANKIGKL 88 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE-EEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEEE
T ss_pred CCCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE-EEE-----CCCCCCcceeEEECCCCC-EEEEecCCCeEEEE
Confidence 34678899999988 677777678999999976 4432 221 222346789999999985 77766667889999
Q ss_pred ECCCCeeEE-EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682 244 NVGTGEIMI-QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 244 d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 322 (490)
|.. ++... .+......+.++++.++++++++...++.|..+|.. ++............+..+++.++|+++++..
T Consensus 89 d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~-- 164 (300)
T 2qc5_A 89 SKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN-- 164 (300)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred CCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec--
Confidence 987 55432 222234678999999999988877778899999987 5544221121233488999999999776664
Q ss_pred CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM 402 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 402 (490)
..+.|..+|. .+. ............+..++++++|+.. ++....+.|.+|+. +++ +.. .........+.++++
T Consensus 165 -~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~-~~~-~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 165 -QNNSIGRITN-TGK-LEEYPLPTNAAAPVGITSGNDGALW-FVEIMGNKIGRITT-TGE-ISE-YDIPTPNARPHAITA 237 (300)
T ss_dssp -TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCC-EEE-EECSSTTCCEEEEEE
T ss_pred -CCCeEEEECC-CCc-EEEeeCCCCCCCcceEEECCCCCEE-EEccCCCEEEEEcC-CCc-EEE-EECCCCCCCceEEEE
Confidence 3567888988 333 1222211233457889999998765 66666778999998 443 221 111122356789999
Q ss_pred eeCceeEEeecc--eeEEEEe
Q psy17682 403 MPKRGCDVNSCE--IGRFFRL 421 (490)
Q Consensus 403 sp~~~~l~~~~~--~~~~~~~ 421 (490)
+++|.+.++... .+..|+.
T Consensus 238 d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCEEEeccCCCeEEEECC
Confidence 999987777643 4444444
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.43 E-value=1.9e-10 Score=105.59 Aligned_cols=226 Identities=9% Similarity=-0.017 Sum_probs=147.7
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.+..-..+..|+|+++.++++...++.|..||..+++. ..+. ....+.++++++++. ++++ . ++.|.+
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--------~~~~~~~i~~~~dG~-l~v~-~-~~~l~~ 77 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT--------MDAPVSSVALRQSGG-YVAT-I-GTKFCA 77 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE--------CSSCEEEEEEBTTSS-EEEE-E-TTEEEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe--------CCCceEEEEECCCCC-EEEE-E-CCeEEE
Confidence 34455678899997657888888889999999877654 2211 456789999999996 5544 3 567999
Q ss_pred EECCCCeeEEEEec----CCCcEEEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeeeeeecCCCceeEE
Q psy17682 243 WNVGTGEIMIQIEC----HPDIVYSASWNWDGSKLLTTCK-----------DKKMRIINPRTGAIEEEAVCHEGSKATRA 307 (490)
Q Consensus 243 wd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 307 (490)
||..+++....... ....+..++++|+|+++++... .+.|+.+|.. ++... +..... ....+
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~-~pngi 154 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVD-ISNGL 154 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEES-BEEEE
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-Eeeccc-cccce
Confidence 99988765433221 1235789999999997665432 2345555543 33322 222222 37889
Q ss_pred EEeCCCcEEEEEeCCCceeEEEEecCC--CCCCC--eEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 308 IYLKSGLIFTTGFSKMSERQYSLRAPD--HLDEP--IVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~--~~~~~--~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+|+|+++.|..... ..+.|.+|++. ++... ..+.... .......++++++|++. ++...++.|.+||..+++
T Consensus 155 ~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw-va~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 155 DWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW-VACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE-EEEETTTEEEEECTTTCC
T ss_pred EEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE-EEEcCCCEEEEEcCCCce
Confidence 99999986654431 46789999874 33210 1112211 22356789999999765 666677889999998887
Q ss_pred CeeEEeeeeeCC-CceeeEEEe-eCceeEE
Q psy17682 383 PFVHYINTFQTP-DPQRGIGMM-PKRGCDV 410 (490)
Q Consensus 383 ~~~~~~~~~~~~-~~i~~~~~s-p~~~~l~ 410 (490)
.+..+..+ ..+++++|. |++..|.
T Consensus 232 ----~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 232 ----RLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp ----EEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred ----EEEEEECCCCCceEEEEeCCCCCEEE
Confidence 23333333 578999999 8876544
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.42 E-value=2.9e-09 Score=100.71 Aligned_cols=246 Identities=11% Similarity=-0.016 Sum_probs=150.7
Q ss_pred eeEeccccccceEEEEE-----eeCCCceEEEECCCCCCCCcccCCCCccee-ec---ccCCeeEEEECCCCCCEEEEEe
Q psy17682 115 EITISEDYVKEFKEEIR-----KLKSQQALSILPPPSTAPNTGRINADHALV-GG---HKGPVLDIAWSPHDDNVIASGS 185 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~-----~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~---h~~~V~~~~~~p~~~~~l~s~~ 185 (490)
.+++||+...-|...-. -+..++.+.+++... .+....+..- .. +...-..++|+|+| ++|+++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-----~~~~~~i~~~~~~~~~~g~~p~~~~~spDG-~~l~v~n 143 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-----FLPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQ 143 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC-----CcEEEEEECCCccccccCCCccceEECCCC-CEEEEEe
Confidence 78999996222111100 012467899998751 1111111100 00 11234588999999 6777665
Q ss_pred C--CCcEEEEECCCCCcccc-cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----cC
Q psy17682 186 E--DCVVKVWQIPDGGISRT-LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----CH 257 (490)
Q Consensus 186 ~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~ 257 (490)
. ++.|.++| .+++.+.. +.. . .++.+.|.+...+++.+.||.+.++|. +++.+.... ..
T Consensus 144 ~~~~~~v~viD-~t~~~~~~~i~~--------~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSSDDQLLSS--------P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTA 210 (373)
T ss_pred cCCCCeEEEEE-CCCCEEeEEcCC--------C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccC
Confidence 3 57899999 98877655 432 1 125566777667888889999999999 887664322 11
Q ss_pred CCc-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeeecC---------CCceeEEEEeCCCcEEEEEeCCC--
Q psy17682 258 PDI-VYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVCHE---------GSKATRAIYLKSGLIFTTGFSKM-- 323 (490)
Q Consensus 258 ~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~---------~~~~~~~~~s~~~~~l~~~~~~~-- 323 (490)
..+ .....+.+++..++..+..+.+.+.|+.... .+..+.... ......+.++|++..+.+....+
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 122 1234566666655555578899999997653 222221110 11133477899988776654211
Q ss_pred -----ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCC
Q psy17682 324 -----SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 324 -----~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..+.|.++|..+.+.. ..+........++|+|||+ .++++...++.|.++|+.+++
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv---~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTS---SQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ccccCCCCeEEEEECCCCEEE---EEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 1357999999876532 3333344688999999999 665444468999999999987
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=2.1e-11 Score=116.11 Aligned_cols=269 Identities=10% Similarity=0.029 Sum_probs=170.5
Q ss_pred ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccccc
Q psy17682 137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLTE 206 (490)
Q Consensus 137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~ 206 (490)
+.+.+++.. +.+ .+..+.--..+ .+.++|+++ +++++. .++.|.++|..+++.+..+..
T Consensus 99 ~~VsVID~~-----t~~---vv~~I~vG~~P--gia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v 167 (426)
T 3c75_H 99 TQQFVIDGS-----TGR---ILGMTDGGFLP--HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL 167 (426)
T ss_dssp EEEEEEETT-----TTE---EEEEEEECSSC--EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred CeEEEEECC-----CCE---EEEEEECCCCC--ceEECCCCC-EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC
Confidence 799999985 222 22333322344 899999994 454443 467899999999987766542
Q ss_pred c-eeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeE
Q psy17682 207 P-VVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKM 282 (490)
Q Consensus 207 ~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i 282 (490)
+ .... ........+.++|+|+ +++++.. ++.|.+.|+.+++.+.++... + . ....|++ +.+++.+.||++
T Consensus 168 ~g~~r~-~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-g-~--~~~~p~g~~~~v~~~~dG~~ 241 (426)
T 3c75_H 168 PDAPRF-LVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-D-C--YHIFPASPTVFYMNCRDGSL 241 (426)
T ss_dssp TTCCCC-CBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E--EEEEEEETTEEEEEETTSSE
T ss_pred CCcccc-ccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEcC-C-c--eeeccCCCcEEEEEcCCCCE
Confidence 1 0000 0112345789999996 6666653 578999999999998888732 2 1 3334443 566777888988
Q ss_pred EEEeCCCCceeee----eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEec-----c---CC
Q psy17682 283 RIINPRTGAIEEE----AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVEL-----D---TS 348 (490)
Q Consensus 283 ~iwd~~~~~~~~~----~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~-----~---~~ 348 (490)
.+.+..+++.... +..........+.+.+++..++... ..+.+.+.|........ ..... . ..
T Consensus 242 ~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 242 ARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT---YTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp EEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB---TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred EEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe---CCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 8888866655432 1111111123456788877666555 35688998886533100 00000 0 01
Q ss_pred CceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---cce
Q psy17682 349 NGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---CEI 415 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~~~ 415 (490)
.+...++++|+++.+|++.. .++.|.+.|+.+.+ .+..+..+....+++|+||++ ++++. ++.
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k----vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE----RINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe----EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 12234789999999877643 24579999999987 334444334689999999998 66655 358
Q ss_pred eEEEEecCCCceEE
Q psy17682 416 GRFFRLNNSGLCQV 429 (490)
Q Consensus 416 ~~~~~~~~~~~~~~ 429 (490)
+.++++.+.+.+..
T Consensus 395 VsVID~~t~kvv~t 408 (426)
T 3c75_H 395 LHIYDAATGEELRS 408 (426)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEEE
Confidence 88899888874443
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=8.1e-11 Score=121.39 Aligned_cols=202 Identities=11% Similarity=0.065 Sum_probs=127.3
Q ss_pred EEEECCCCCCEEEEEeCC-------------CcEEEEECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEEe
Q psy17682 170 DIAWSPHDDNVIASGSED-------------CVVKVWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAG 235 (490)
Q Consensus 170 ~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~ 235 (490)
.++|+ || +.|+.++.+ ..|++|++.++..... .+..... |...+.++.|+|+|+.++++.+
T Consensus 179 ~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~---~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 179 GISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR---LVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE---EEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred cEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccce---EEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 45677 66 455555544 3499999877643211 1111222 3445788999999975555554
Q ss_pred C---CCcEEEEECCCCe-eEEEEecCCCcEEEEEEcCCCCEEEEEe-CC---CeEEEEeCCCCce--eeeeeecCCCcee
Q psy17682 236 S---DNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGSKLLTTC-KD---KKMRIINPRTGAI--EEEAVCHEGSKAT 305 (490)
Q Consensus 236 ~---dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~ 305 (490)
. +..|.++|+.+++ ....+..+....... ++++|..|+..+ .+ +.|..+|+.++.. ...+..+... +.
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~ 331 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL 331 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE
Confidence 3 2589999998763 345555565555555 666666555444 33 6799999988754 3445555544 33
Q ss_pred EEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC---CCeEEEEEecCCC
Q psy17682 306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG---DSVIRYFEITAEP 382 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~---dg~i~iwd~~~~~ 382 (490)
.|++++..|+....+.....|++|++.... ...........+..+.++++++.++++.+. -+.++.||+.+++
T Consensus 332 --~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 332 --TVHSGSGYLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp --EEEEETTEEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred --EEEEECCEEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 889998887776633234579999987432 122223344557788889999888665433 2789999988775
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=5.4e-11 Score=122.71 Aligned_cols=245 Identities=9% Similarity=0.036 Sum_probs=150.0
Q ss_pred cccCCeeEEEECCCCCCEEE-EEe----CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIA-SGS----EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~-s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 237 (490)
+|...+.+++||||| ++|| +.+ ....|++||+.+++.+... + +......++|+ |++ .|+.++.+
T Consensus 126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~------~--~~~k~~~~~Ws-Dg~-~l~y~~~~ 194 (693)
T 3iuj_A 126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPLETP------L--KDVKFSGISWL-GNE-GFFYSSYD 194 (693)
T ss_dssp TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEEEEE------E--EEEESCCCEEE-TTT-EEEEEESS
T ss_pred CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCCccc------c--CCceeccEEEe-CCC-EEEEEEec
Confidence 466678899999999 5555 333 2357999999998754320 1 11113567899 986 66666665
Q ss_pred C-------------cEEEEECCCCee--EEEEe--c-CCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc-eee
Q psy17682 238 N-------------NVAIWNVGTGEI--MIQIE--C-HPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGA-IEE 294 (490)
Q Consensus 238 g-------------~v~iwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~ 294 (490)
. .|++|++.++.. ...+. . |......+.|+|||++|+.... .+.|+++|+.++. ...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 3 399999987642 22232 3 4455788999999998866543 2489999998764 344
Q ss_pred eeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--
Q psy17682 295 EAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-- 371 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-- 371 (490)
.+..+... .... ++++|..| +....+...+.|..+|+.+...........+...+. .|+++++.|+++...++
T Consensus 275 ~l~~~~~~-~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~ 350 (693)
T 3iuj_A 275 TVQGDLDA-DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATA 350 (693)
T ss_dssp EEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEE
T ss_pred EEeCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCee
Confidence 45544443 3333 56665544 444433335789999998754311111123333444 89999999977766665
Q ss_pred eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--c----ceeEEEEecCCC
Q psy17682 372 VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--C----EIGRFFRLNNSG 425 (490)
Q Consensus 372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~----~~~~~~~~~~~~ 425 (490)
.|++|++..+. .+.+. +.....+..+.++|++..++.. + ..+..|++.++.
T Consensus 351 ~l~~~d~~g~~--~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 351 RVEQFDYEGKR--VREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEECTTSCE--EEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEEECCCCe--eEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 67888877542 22221 2233457777888887654433 2 244555555554
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.4e-11 Score=115.67 Aligned_cols=135 Identities=14% Similarity=0.069 Sum_probs=105.0
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.+.+ |+.++| ++ ++|+++ .++.|++||+.+...... ...|...+.++.+.+. -++++..||.|.+
T Consensus 86 ~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~~~~-------~~~~~~~v~~i~~~~p---~~av~~~dG~L~v 150 (388)
T 1xip_A 86 EIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSEFRT-------VTSFEKPVFQLKNVNN---TLVILNSVNDLSA 150 (388)
T ss_dssp ECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTCEEE-------EEECSSCEEEEEECSS---EEEEEETTSEEEE
T ss_pred eCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhccCc-------cceeecceeeEEecCC---CEEEEECCCCEEE
Confidence 3556 999999 66 788888 889999999977653322 2336677888777654 3888899999999
Q ss_pred EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeeee---------ecCCCceeEEEEeC
Q psy17682 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--EEEAV---------CHEGSKATRAIYLK 311 (490)
Q Consensus 243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---------~~~~~~~~~~~~s~ 311 (490)
||+.+++... +...|++++|+|+| ++.|..||++++|+...++. ..++. +|. ..+.++.|.+
T Consensus 151 ~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~-~~V~sI~wl~ 223 (388)
T 1xip_A 151 LDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE-YSPLSVTILS 223 (388)
T ss_dssp EETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT-SEEEEEEESS
T ss_pred EEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCC-eeEEEEEEec
Confidence 9999877643 34579999999999 78899999999999887775 55552 133 4599999999
Q ss_pred CCcEEEEE
Q psy17682 312 SGLIFTTG 319 (490)
Q Consensus 312 ~~~~l~~~ 319 (490)
++.++++=
T Consensus 224 ~~~flv~y 231 (388)
T 1xip_A 224 PQDFLAVF 231 (388)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 99988763
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=2.5e-10 Score=105.28 Aligned_cols=239 Identities=10% Similarity=-0.009 Sum_probs=151.8
Q ss_pred ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682 159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN 238 (490)
Q Consensus 159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 238 (490)
..+..+.....+..|+|++..++++...++.|..|+. +++. .. +..+...+.+++++++|. ++++...++
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~-------~~~~~~~~~gl~~d~dG~-l~v~~~~~~ 107 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DV-------LLDATAFTNGNAVDAQQR-LVHCEHGRR 107 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EE-------EEESCSCEEEEEECTTSC-EEEEETTTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EE-------EeCCCCccceeeECCCCC-EEEEECCCC
Confidence 3445556678899999998557888888899999997 4432 22 222556789999999985 666555567
Q ss_pred cEEEEECCCCeeEEEEec----CCCcEEEEEEcCCCCEEEE----EeC-------------CCeEEEEeCCCCceeeeee
Q psy17682 239 NVAIWNVGTGEIMIQIEC----HPDIVYSASWNWDGSKLLT----TCK-------------DKKMRIINPRTGAIEEEAV 297 (490)
Q Consensus 239 ~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~ 297 (490)
.|.+|+.. ++....... ....+..++++|+|+++++ |.. .+.|+.+|..+++.....
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 89999986 553222211 1234668999999998886 332 356888888777654433
Q ss_pred ecCCCceeEEEEeCCCcEEEEEeCCC---ceeEEEEecCCCCCCCeEEEec--cCCCceeeeeecCCCCeEEEEecCCCe
Q psy17682 298 CHEGSKATRAIYLKSGLIFTTGFSKM---SERQYSLRAPDHLDEPIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSV 372 (490)
Q Consensus 298 ~~~~~~~~~~~~s~~~~~l~~~~~~~---~~~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~ 372 (490)
. .. ....++|+|+++.|..+.... ..+.|.+|++.... ......+ ........++++++|++. ++. .+ .
T Consensus 186 ~-~~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~-~~-g 259 (305)
T 3dr2_A 186 D-LD-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSS-GT-G 259 (305)
T ss_dssp E-ES-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECC-SS-E
T ss_pred c-CC-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-Eec-CC-c
Confidence 2 22 378899999999776665210 02689999887543 1111111 112335678899999954 443 44 4
Q ss_pred EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682 373 IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 373 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~ 421 (490)
|.+|+.. ++ .+..+..+..+.+++|+|++..|..+... .+|.+
T Consensus 260 v~~~~~~-g~----~~~~~~~~~~~~~~~f~~d~~~L~it~~~-~l~~~ 302 (305)
T 3dr2_A 260 VCVFDSD-GQ----LLGHIPTPGTASNCTFDQAQQRLFITGGP-CLWML 302 (305)
T ss_dssp EEEECTT-SC----EEEEEECSSCCCEEEECTTSCEEEEEETT-EEEEE
T ss_pred EEEECCC-CC----EEEEEECCCceeEEEEeCCCCEEEEEcCC-eEEEE
Confidence 8999874 44 23333334468899999988655544332 44443
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=8.5e-10 Score=101.26 Aligned_cols=191 Identities=10% Similarity=0.052 Sum_probs=121.2
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC---------
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--------- 236 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--------- 236 (490)
..+.+++++|+| +++++ . ++.|.+||.++++........ .......+.++++.|+|. ++++...
T Consensus 54 ~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~---~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 54 APVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVD---NDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLE 126 (297)
T ss_dssp SCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECC---TTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCC
T ss_pred CceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecC---CCCCCCCCCCEEECCCCC-EEEecCCccccccccc
Confidence 468899999998 55444 4 568999998776542211100 001234578999999996 5554322
Q ss_pred CCcEEEEECCC-CeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEeC--CCCcee--eeee---ecCCCceeEE
Q psy17682 237 DNNVAIWNVGT-GEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKKMRIINP--RTGAIE--EEAV---CHEGSKATRA 307 (490)
Q Consensus 237 dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~~~--~~~~---~~~~~~~~~~ 307 (490)
...-.+|.+.. ++... +..+......++|+|+++.|+ +.+.++.|.+||+ .++... ..+. ...+ .+..+
T Consensus 127 ~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~ 204 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGM 204 (297)
T ss_dssp TTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEE
T ss_pred CCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCee
Confidence 12234555442 33332 333445578999999998665 4556789999987 455432 1121 1222 47889
Q ss_pred EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec-CCCCeEEEEecCC
Q psy17682 308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD-PDTNLVYLCGKGD 370 (490)
Q Consensus 308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~g~~d 370 (490)
+++++|++.++.. ..+.|.+||..+++....+. .+...+++++|. |+++.|+++...+
T Consensus 205 ~~d~~G~lwva~~---~~~~v~~~d~~tG~~~~~i~--~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 205 CIDAEGKLWVACY---NGGRVIRLDPVTGKRLQTVK--LPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEBTTSCEEEEEE---TTTEEEEECTTTCCEEEEEE--CSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EECCCCCEEEEEc---CCCEEEEEcCCCceEEEEEE--CCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 9999998887776 46779999998665322222 223568999998 8999998877554
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=2.3e-09 Score=99.77 Aligned_cols=220 Identities=8% Similarity=0.054 Sum_probs=142.7
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~ 246 (490)
...+..|+|+++.++++...++.|..||..+++. ..+. ....+.++.|.|++. ++++ +.+ .|.+||..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--------~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA--------LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE--------CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE--------CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECC
Confidence 4567899998657788887889999999876643 2111 345789999999985 5554 444 49999998
Q ss_pred CCeeEEEEec----CCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682 247 TGEIMIQIEC----HPDIVYSASWNWDGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF 316 (490)
Q Consensus 247 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 316 (490)
+++....... ....+..++++|+|+++++... .+.|+.++ +++.. .+..... ....++|+|+|+.+
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~-~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADIS-IPNSICFSPDGTTG 193 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEES-SEEEEEECTTSCEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCc-ccCCeEEcCCCCEE
Confidence 8775432221 1235889999999997765542 25677777 45433 2222222 36789999999866
Q ss_pred EEEeCCCceeEEEEecCC--CC-CC--CeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682 317 TTGFSKMSERQYSLRAPD--HL-DE--PIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT 390 (490)
Q Consensus 317 ~~~~~~~~~~~i~iwd~~--~~-~~--~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~ 390 (490)
..+.. ..+.|.+|+.. ++ .. ...+.... .......++++++|++. ++...++.|.+|+. +++ .. ..
T Consensus 194 yv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw-va~~~~~~v~~~d~-~g~-~~---~~ 265 (326)
T 2ghs_A 194 YFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGN-HI---AR 265 (326)
T ss_dssp EEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCC-EE---EE
T ss_pred EEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE-EEEeCCCEEEEECC-CCC-EE---EE
Confidence 55432 36789999986 33 21 12222222 22346788999999766 55555678999998 454 22 22
Q ss_pred eeC-CCceeeEEEe-eCceeEE
Q psy17682 391 FQT-PDPQRGIGMM-PKRGCDV 410 (490)
Q Consensus 391 ~~~-~~~i~~~~~s-p~~~~l~ 410 (490)
+.. ...+.+++|+ |++..+.
T Consensus 266 i~~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp EECSCSBEEEEEEESTTSCEEE
T ss_pred EECCCCCcEEEEEecCCCCEEE
Confidence 232 2368999998 8875443
No 216
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.33 E-value=1.2e-10 Score=109.65 Aligned_cols=234 Identities=12% Similarity=0.030 Sum_probs=152.4
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCC----Ccccccccceeee-cccccCEEEEEEeeCCCCEEEEEeCC------CcEEEE
Q psy17682 175 PHDDNVIASGSEDCVVKVWQIPDG----GISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIW 243 (490)
Q Consensus 175 p~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iw 243 (490)
++.+.+++++..++.|.++|+.+. +..+.+. |.... .........+...|+| +++++..+ +.|.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie-~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIE-PEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEEC-HHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeec-hhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 777667777888899999998755 2222221 00000 0011245677888998 66666555 789999
Q ss_pred ECCCCeeEEEEecCC---CcEEEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceeeeeeec-C
Q psy17682 244 NVGTGEIMIQIECHP---DIVYSASWNWDGSKLLTTC-------------------KDKKMRIINPRTGAIEEEAVCH-E 300 (490)
Q Consensus 244 d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~-~ 300 (490)
|..+++.+.++.... .--+.+.|+|+++.+++.. .+.+|.+||+.+++.+.++... .
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 999999998886221 2234688899999888874 3689999999998888877642 2
Q ss_pred CCceeEEEE--eCCCcEEEEEeC---CCceeEEEEecCCCCCCCeEEEe--ccC-----------------CCceeeeee
Q psy17682 301 GSKATRAIY--LKSGLIFTTGFS---KMSERQYSLRAPDHLDEPIVMVE--LDT-----------------SNGVMFPLY 356 (490)
Q Consensus 301 ~~~~~~~~~--s~~~~~l~~~~~---~~~~~~i~iwd~~~~~~~~~~~~--~~~-----------------~~~i~~~~~ 356 (490)
+.....+.| +|+++++.++.. ...++.|.+|..+.+. ...... ... ......+.+
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 223555655 999998877763 0014566655544321 000110 000 234678899
Q ss_pred cCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC---------------CceeeEEEeeCceeEEeec
Q psy17682 357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP---------------DPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------~~i~~~~~sp~~~~l~~~~ 413 (490)
|+||++||++.-..+.|.+||+..... .+.+.....+ ..-..++++|||+++.++.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999988889999999974321 1233333322 1358899999998888776
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.32 E-value=1.4e-09 Score=104.49 Aligned_cols=238 Identities=12% Similarity=0.006 Sum_probs=143.0
Q ss_pred CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC--cEE
Q psy17682 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC--VVK 191 (490)
Q Consensus 114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg--~i~ 191 (490)
..++++++. .+.++...++.|++|+.. .+. +..+........ ++|+|++ ..|+++..++ .|.
T Consensus 134 ~~la~d~~g-----~lyv~d~~~~~I~~id~~-----~g~----~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~ 197 (409)
T 3hrp_A 134 WGIAAVGNN-----TVLAYQRDDPRVRLISVD-----DNK----VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVY 197 (409)
T ss_dssp EEEEECSTT-----EEEEEETTTTEEEEEETT-----TTE----EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEE
T ss_pred eEEEEeCCC-----CEEEEecCCCcEEEEECC-----CCE----EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEE
Confidence 455665553 233444455677777663 111 111111122233 8999988 6777777765 788
Q ss_pred EEECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE----EecCCCcE-E-EE
Q psy17682 192 VWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ----IECHPDIV-Y-SA 264 (490)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~-~~ 264 (490)
+++...+.....+. .... ....+.+++++|++. .|+.+..++.|+.||..++..... ..++...- . .+
T Consensus 198 ~~d~~~~~~~~~~g----~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i 272 (409)
T 3hrp_A 198 VYMKASGWAPTRIG----QLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL 272 (409)
T ss_dssp EEEGGGTTCEEEEE----ECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE
T ss_pred EEEcCCCceeEEee----eccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccE
Confidence 88876554322220 0111 345678899999543 455567788999999987753322 11222222 2 89
Q ss_pred EEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecC--------------CCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682 265 SWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHE--------------GSKATRAIYLKSGLIFTTGFSKMSERQYS 329 (490)
Q Consensus 265 ~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~ 329 (490)
+|+|+ +.++++-..++.|+.|+.... ...+.++. -.....++++++|+++++-.. ..+.|+
T Consensus 273 a~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~--~~~~I~ 348 (409)
T 3hrp_A 273 IYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF--KGYCLR 348 (409)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT--TTCEEE
T ss_pred EEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC--CCCEEE
Confidence 99995 566666667889999997643 33333322 123788999999996665430 267899
Q ss_pred EecCCCCCCCeEEEecc-------------CCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682 330 LRAPDHLDEPIVMVELD-------------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI 378 (490)
Q Consensus 330 iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~ 378 (490)
.|++.++. ...+.... .-.....++++++|.+ +++-..++.|+.+++
T Consensus 349 ~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l-yVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 349 KLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY-WIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE-EEEESTTCEEEEEEE
T ss_pred EEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE-EEEECCCCeEEEEEe
Confidence 99966543 11111110 0134678999999655 477778888888775
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=9.3e-10 Score=101.43 Aligned_cols=236 Identities=8% Similarity=0.048 Sum_probs=151.1
Q ss_pred CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682 35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN 114 (490)
Q Consensus 35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (490)
..+..+..+........|+|+++.++++...++.|..|+. ++..
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~----------------------------------- 78 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV----------------------------------- 78 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-----------------------------------
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-----------------------------------
Confidence 4555666677788899999998557888878888888876 3220
Q ss_pred eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194 (490)
Q Consensus 115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd 194 (490)
. .+..+...+.+++++++| +++++...++.|.+|+
T Consensus 79 -------------------------~-------------------~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 79 -------------------------D-------------------VLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp -------------------------E-------------------EEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred -------------------------E-------------------EEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 0 111233457889999988 6666655667899999
Q ss_pred CCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEE----EeC-------------CCcEEEEECCCCeeEEEEec
Q psy17682 195 IPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLT----AGS-------------DNNVAIWNVGTGEIMIQIEC 256 (490)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s----~~~-------------dg~v~iwd~~~~~~~~~~~~ 256 (490)
.. ++. ..+.. ...+ ....+.++++.|+|. ++++ |.. .+.|..+|..+++.....
T Consensus 114 ~~-g~~-~~~~~---~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-- 185 (305)
T 3dr2_A 114 AD-GQA-HLLVG---RYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-- 185 (305)
T ss_dssp TT-SCE-EEEEC---EETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred CC-CCE-EEEEe---ccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence 75 443 22111 0111 123467899999995 6665 322 246777887666644332
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCcee--eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682 257 HPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIE--EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328 (490)
Q Consensus 257 ~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i 328 (490)
.......++|+|+++.|+.+... +.|++||+..+... ..+.......+..++++++|++.++. .+ .|
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~----~~-gv 260 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS----GT-GV 260 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC----SS-EE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec----CC-cE
Confidence 33457889999999987777665 78999998765411 11111111225678899999965544 23 48
Q ss_pred EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682 329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
.+|+... +. ...+.....+..++|+++++.|++++.
T Consensus 261 ~~~~~~g-~~---~~~~~~~~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 261 CVFDSDG-QL---LGHIPTPGTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEECTTS-CE---EEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred EEECCCC-CE---EEEEECCCceeEEEEeCCCCEEEEEcC
Confidence 9999853 32 222222336889999999999976653
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.31 E-value=2.4e-09 Score=102.00 Aligned_cols=281 Identities=13% Similarity=0.100 Sum_probs=173.5
Q ss_pred cCCCceEEeeeCC----CeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682 54 PTAQNVLLTAGKE----AEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE 129 (490)
Q Consensus 54 p~~~~~l~s~~~D----~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 129 (490)
|++..++++...+ +.|.+.|..+++. ...+.. + . .- .++++|+...-|...
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v------------------v~~I~v-G----~-~P-gia~SpDgk~lyVan 136 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI------------------LGMTDG-G----F-LP-HPVAAEDGSFFAQAS 136 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE------------------EEEEEE-C----S-SC-EEEECTTSSCEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE------------------EEEEEC-C----C-CC-ceEECCCCCEEEEEe
Confidence 3443455555544 7999999988652 111111 0 0 12 789999974333332
Q ss_pred EEe-----eCCCceEEEECCCCCCCCcccCCCCcceee-c------ccCCeeEEEECCCCCCEEEEEeC--CCcEEEEEC
Q psy17682 130 IRK-----LKSQQALSILPPPSTAPNTGRINADHALVG-G------HKGPVLDIAWSPHDDNVIASGSE--DCVVKVWQI 195 (490)
Q Consensus 130 ~~~-----~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~------h~~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~ 195 (490)
... +..++.|.+++.. +.+. ...+. + .......+.|+|+| ++++++.. ++.|.+.|+
T Consensus 137 ~~~~~~~~G~~~~~VsviD~~-----t~~v---v~~I~v~g~~r~~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 137 TVFERIARGKRTDYVEVFDPV-----TFLP---IADIELPDAPRFLVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EEEEETTEEEEEEEEEEECTT-----TCCE---EEEEEETTCCCCCBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEET
T ss_pred ccccccccCCCCCEEEEEECC-----CCcE---EEEEECCCccccccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEEC
Confidence 111 1246789999885 2221 12221 1 11235678999999 67777653 578999999
Q ss_pred CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE----ecCCCcE-EEEEEcCCC
Q psy17682 196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----ECHPDIV-YSASWNWDG 270 (490)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~v-~~~~~~~~~ 270 (490)
.+++.+..+..+ . +....|++...+++.+.||.+.+.+..+++..... .....++ ..+.+.+++
T Consensus 208 ~t~kvv~~I~v~--------g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 208 EGKTFDRMLDVP--------D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp TTTEEEEEEECC--------S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred CCCeEEEEEEcC--------C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 999877765421 1 13345655567778888888888888666554321 1111111 235678998
Q ss_pred CEEEEEeCCCeEEEEeCCCCcee--eeeeec------CC---CceeEEEEeCCCcEEEEEeCC-------CceeEEEEec
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIE--EEAVCH------EG---SKATRAIYLKSGLIFTTGFSK-------MSERQYSLRA 332 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~------~~---~~~~~~~~s~~~~~l~~~~~~-------~~~~~i~iwd 332 (490)
..++..+..+.+.+.|....... ..+... .+ .....++++|++..+.+.... ...+.|.+.|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 88888888899999998765422 111100 00 012236899997766554311 1256899999
Q ss_pred CCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCC
Q psy17682 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..+.+....+ ........+.|+|||+ .+|++...++.|.++|+.+.+
T Consensus 357 ~~T~kvv~~I---~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 357 AETGERINKI---ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp TTTCCEEEEE---EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCeEEEEE---ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 9987643332 2233578999999999 786666579999999999998
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=3.7e-11 Score=112.84 Aligned_cols=178 Identities=9% Similarity=-0.001 Sum_probs=128.6
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc-----ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR-----TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
+++.+++++.. .++++|+.+ .+.+|++++.+... .+ .+.... .+.. |+.++| ++ +.|+++ .++.|+
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~-~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPL-TFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCC-CCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccc-cceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEE
Confidence 78999999987 789999988 56679875432100 01 121112 2556 999999 66 488888 889999
Q ss_pred EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeC
Q psy17682 242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFS 321 (490)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 321 (490)
+||+++.........|...+.++.+.+. .+++++.||.|.+||+.++.... + .. .+++++|+|+| ++.|.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~---~~-~Vs~v~WSpkG--~~vg~- 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L---AQ-NVTSFDVTNSQ--LAVLL- 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E---EE-SEEEEEECSSE--EEEEE-
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c---cC-CceEEEEcCCc--eEEEE-
Confidence 9999877666666677888888887754 38889999999999999887643 1 12 39999999999 45565
Q ss_pred CCceeEEEEecCCCCCC--CeEEE-------eccCCCceeeeeecCCCCeEEE
Q psy17682 322 KMSERQYSLRAPDHLDE--PIVMV-------ELDTSNGVMFPLYDPDTNLVYL 365 (490)
Q Consensus 322 ~~~~~~i~iwd~~~~~~--~~~~~-------~~~~~~~i~~~~~s~~~~~l~~ 365 (490)
.++.+++|+...... ...+. ...+...|.++.|.+++.++++
T Consensus 180 --~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 --KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp --TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred --cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 588999998876542 11120 0125677999999999998844
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=5.6e-10 Score=104.79 Aligned_cols=241 Identities=8% Similarity=-0.035 Sum_probs=150.2
Q ss_pred CCeeEEEECCCCCCEEEEEe--CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-----CC
Q psy17682 166 GPVLDIAWSPHDDNVIASGS--EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----DN 238 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----dg 238 (490)
..+..++++|+| +++++.. .++.++||.+.+++ +..+.........+-..+.++++.+++. ++++-.. ++
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 689999999988 7777753 23435666665443 2222110011223556899999999984 5554432 57
Q ss_pred cEEEEECCCCeeEEEEecC------CCcEEEEEEcCCCCE-EEEEe---CCCeEEEEeCCCCceeeeeeecC--------
Q psy17682 239 NVAIWNVGTGEIMIQIECH------PDIVYSASWNWDGSK-LLTTC---KDKKMRIINPRTGAIEEEAVCHE-------- 300 (490)
Q Consensus 239 ~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-l~~~~---~dg~i~iwd~~~~~~~~~~~~~~-------- 300 (490)
.|.+||+.+++.+..+... ...+..+++++++.. +++.. .++.|.+||+.+++..+.+..|.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 8999999999877766532 234689999986544 45544 57899999998877655442210
Q ss_pred --------------------CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC---CCCC-----eEEEeccCCCcee
Q psy17682 301 --------------------GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH---LDEP-----IVMVELDTSNGVM 352 (490)
Q Consensus 301 --------------------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~---~~~~-----~~~~~~~~~~~i~ 352 (490)
...+..++++|+|+.|..+.. ....+..++... .... ..+....+.....
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 012577999999987777653 223555554321 1000 0001111223456
Q ss_pred eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682 353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE 414 (490)
Q Consensus 353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 414 (490)
.++++++|+.+ ++...++.|.+||..+++ + ..+..........+++|.+++.+.++...
T Consensus 252 gia~d~~G~l~-va~~~~~~V~~~d~~~G~-~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 252 GISIDKDHNIY-VGDLAHSAIGVITSADRA-Y-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp CEEECTTCCEE-EEEGGGTEEEEEETTTTE-E-EEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred eEEECCCCCEE-EEccCCCeEEEEECCCCC-E-EEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 78999998765 778888999999985554 2 22222122345789999999988777654
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=3.8e-10 Score=109.91 Aligned_cols=242 Identities=10% Similarity=0.052 Sum_probs=165.1
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE-e-eCCCCEEEEEe-----------------
Q psy17682 175 PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW-H-PTAQNVLLTAG----------------- 235 (490)
Q Consensus 175 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-p~~~~~l~s~~----------------- 235 (490)
+||+.++++...++.|.+.|+.+.++.+.+..| .......+++ . |+++ ++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip------~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC------CCCCCcceeeeecCCCc-EEEEecccccccCCCCccccccc
Confidence 367444454555667999999999876644322 3345788888 4 8986 566653
Q ss_pred -CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC----------------------------------
Q psy17682 236 -SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK---------------------------------- 280 (490)
Q Consensus 236 -~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------------------------- 280 (490)
.++.+.+.|..+.+.+.++.-.. ....++++|+|+++++.+.+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred ccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 34579999999999888887322 456788999999999888543
Q ss_pred ----eEEEEeCCC--Cce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC---------CeEEEe
Q psy17682 281 ----KMRIINPRT--GAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE---------PIVMVE 344 (490)
Q Consensus 281 ----~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~---------~~~~~~ 344 (490)
.|.+.|.++ ++. +..+.... ...++.++|||++++++.. ....|.++|+.+.+. ......
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred eEECcEEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEEEEeCC--CCCeEEEEECcccccccccccCcccceEEE
Confidence 477788877 444 44554333 2788999999998887763 578899999985421 112334
Q ss_pred ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC------CCeeEEeeeeeCCCce------eeEEEeeCceeEEee
Q psy17682 345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE------PPFVHYINTFQTPDPQ------RGIGMMPKRGCDVNS 412 (490)
Q Consensus 345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~i------~~~~~sp~~~~l~~~ 412 (490)
.....+...++|+|+| ++|++.-.|+.|.+||+... +.....+....-+... .++.++|||++|++.
T Consensus 327 v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 327 PELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred cCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 4555678999999999 88889999999999999872 1111233333322111 334668999999988
Q ss_pred cc----ee-----------EEEEecCCCceEEE
Q psy17682 413 CE----IG-----------RFFRLNNSGLCQVV 430 (490)
Q Consensus 413 ~~----~~-----------~~~~~~~~~~~~~i 430 (490)
+. .+ .++++..++ ++.+
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~-m~lv 437 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDK-MVLV 437 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSS-CEEE
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCc-EEEE
Confidence 54 22 788887666 4433
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=9.6e-10 Score=103.15 Aligned_cols=206 Identities=11% Similarity=-0.022 Sum_probs=131.9
Q ss_pred cccCCeeEEEECCCCCCEEEEEeC-----CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSE-----DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-- 235 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-- 235 (490)
+|-..+.++++++++ +++++-.. ++.|.+||+.+++.+..+..+.. ...+...+..+++++++..++++..
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCcc
Confidence 466789999999987 55555433 57899999988876554432110 1123345789999987544556655
Q ss_pred -CCCcEEEEECCCCeeEEEEecC-----------------------------CCcEEEEEEcCCCCEEEEEeCCC-eEEE
Q psy17682 236 -SDNNVAIWNVGTGEIMIQIECH-----------------------------PDIVYSASWNWDGSKLLTTCKDK-KMRI 284 (490)
Q Consensus 236 -~dg~v~iwd~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~dg-~i~i 284 (490)
.++.|.+||+.+++....+..| ...+..++|+|+++.|+.+..++ .++.
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 5789999999888766555332 12368899999999888887665 5555
Q ss_pred EeCC---CCc-----eee--eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682 285 INPR---TGA-----IEE--EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP 354 (490)
Q Consensus 285 wd~~---~~~-----~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 354 (490)
++.. .+. ... ...++.+ ....++++++|.++++.. ..+.|.+||..+++ ...+...........+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgia~d~~G~l~va~~---~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~v 296 (343)
T 2qe8_A 222 IKSADLSNLQLTDAELGSKIERYSEKP-ICDGISIDKDHNIYVGDL---AHSAIGVITSADRA-YKLLVTDEKLSWTDSF 296 (343)
T ss_dssp EEHHHHTCTTCCHHHHHTTCEEEEECC-SCSCEEECTTCCEEEEEG---GGTEEEEEETTTTE-EEEEEECGGGSCEEEE
T ss_pred EEHHHhcCCCCChhhhhcceEecccCC-CCceEEECCCCCEEEEcc---CCCeEEEEECCCCC-EEEEEECCceecCCee
Confidence 5532 111 001 1112333 367789999999888876 67899999984433 1222222223457899
Q ss_pred eecCCCCeEEEEecCCCeEEEE
Q psy17682 355 LYDPDTNLVYLCGKGDSVIRYF 376 (490)
Q Consensus 355 ~~s~~~~~l~~~g~~dg~i~iw 376 (490)
+|+++++++ ++.+..+.+.+|
T Consensus 297 a~~~~g~l~-v~~~~~~~~~~f 317 (343)
T 2qe8_A 297 NFGSDGYLY-FDCNQLHHSAPL 317 (343)
T ss_dssp EECTTSCEE-EEECCGGGSGGG
T ss_pred EECCCCcEE-EEeCcccccccc
Confidence 999998765 565544444333
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.21 E-value=2e-08 Score=93.43 Aligned_cols=228 Identities=11% Similarity=0.055 Sum_probs=140.0
Q ss_pred cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682 44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV 123 (490)
Q Consensus 44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 123 (490)
..-..+..|+|++..++++...++.|..||..++... .. .. ...+.+++++++.
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~----------------~~-~~--------~~~v~~i~~~~dg- 101 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT----------------VH-AL--------PFMGSALAKISDS- 101 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE----------------EE-EC--------SSCEEEEEEEETT-
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE----------------EE-EC--------CCcceEEEEeCCC-
Confidence 3446788999987678888878899999998875410 00 00 1146677888774
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee-c-ccCCeeEEEECCCCCCEEEEEeCC----CcEEEEECCC
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG-G-HKGPVLDIAWSPHDDNVIASGSED----CVVKVWQIPD 197 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~-h~~~V~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~ 197 (490)
.+++ +.. ..+.+|+.. .++.. .+.... + ....+.+++++|+| +++++...+ +...||.+.+
T Consensus 102 ----~l~v-~~~-~gl~~~d~~-----~g~~~-~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~~ 168 (326)
T 2ghs_A 102 ----KQLI-ASD-DGLFLRDTA-----TGVLT-LHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAK 168 (326)
T ss_dssp ----EEEE-EET-TEEEEEETT-----TCCEE-EEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEET
T ss_pred ----eEEE-EEC-CCEEEEECC-----CCcEE-EEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEeC
Confidence 1222 223 347788763 22211 000010 1 12458899999998 565554321 2234444433
Q ss_pred CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC--CC-e-----eEEEEecCCCcEEEEEEcCC
Q psy17682 198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG--TG-E-----IMIQIECHPDIVYSASWNWD 269 (490)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~~~~ 269 (490)
++. ..+ ..+......++|+|+++.++++.+.++.|.+||+. ++ + ....+.........+++.++
T Consensus 169 g~~-~~~-------~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~ 240 (326)
T 2ghs_A 169 GKV-TKL-------FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE 240 (326)
T ss_dssp TEE-EEE-------EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT
T ss_pred CcE-EEe-------eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC
Confidence 322 211 11334567899999996444555567899999986 55 3 12223233456788999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEe-CCCcEEEEEe
Q psy17682 270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL-KSGLIFTTGF 320 (490)
Q Consensus 270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~~~ 320 (490)
|+++++...++.|.+||. +++.+..+..+.. .+.+++|+ +++..|.+++
T Consensus 241 G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~-~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 241 GHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEEESTTSCEEEEEE
T ss_pred CCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-CcEEEEEecCCCCEEEEEe
Confidence 988777777789999998 5676666665443 48999998 8876655443
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=5.5e-10 Score=104.62 Aligned_cols=210 Identities=9% Similarity=-0.006 Sum_probs=129.6
Q ss_pred eeEEEECCCCCCEEEEEeC--CCcEEE--EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 168 VLDIAWSPHDDNVIASGSE--DCVVKV--WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 168 V~~~~~~p~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
...++++|+| ++++++.. +..+.+ +|+.+ +..+.. .+ + ....|+++..+++.+.|+.+.+.
T Consensus 126 P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~t---v~~i~v--------~~-~--~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 126 VHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASD---DQLTKS--------AS-C--FHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp TTSEEECTTS-SCEEEEECSSSCEEEEEETTTEE---EEEEEC--------SS-C--CCCEEEETTEEECCCCTTSCEEE
T ss_pred cceEEEcCCC-CEEEEEccCCCCeEEEEEEchhh---ceEEEC--------CC-c--eEEccCCCeEEEEEcCCCCEEEE
Confidence 4468999999 56666653 457888 88866 233221 11 1 22356666677777888999888
Q ss_pred ECCC-----CeeEEE----EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeee------cCCCc---
Q psy17682 244 NVGT-----GEIMIQ----IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVC------HEGSK--- 303 (490)
Q Consensus 244 d~~~-----~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~------~~~~~--- 303 (490)
|+.+ ++.... +.....+. . .+++..++..+. +.+.+.|+.+.. .+..+.. ..+..
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 9876 433211 11122333 3 666666666666 999999997543 2222211 01100
Q ss_pred eeEEEEeCCCcEEEEEeC-C-Cc----eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec-CCCeEEEE
Q psy17682 304 ATRAIYLKSGLIFTTGFS-K-MS----ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK-GDSVIRYF 376 (490)
Q Consensus 304 ~~~~~~s~~~~~l~~~~~-~-~~----~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~-~dg~i~iw 376 (490)
...++++|+++.+.++.. . +. ...+.++|+.+.+. +..+........++|+|||++++++.. .++.|.++
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v---v~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE---EEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEE
Confidence 122689999887776542 1 10 23455999998753 233332336889999999998777777 69999999
Q ss_pred EecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682 377 EITAEPPFVHYINTFQTPDPQRGIGMMP 404 (490)
Q Consensus 377 d~~~~~~~~~~~~~~~~~~~i~~~~~sp 404 (490)
|+.+.+ .+..+.-+....++++.+
T Consensus 343 D~~t~k----vv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 343 DAASDQ----DQSSVELDKGPESLSVQN 366 (368)
T ss_dssp ESSSCE----EEEECCCCSCCCEEECCC
T ss_pred ECCCCc----EEEEEECCCCCCEEEeec
Confidence 999987 444445445556666654
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.18 E-value=1.1e-08 Score=90.60 Aligned_cols=201 Identities=9% Similarity=0.005 Sum_probs=141.9
Q ss_pred CeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 167 PVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
....+.|+|++ .++++.+. ++.|++.|+.+++.+..+.. . .......+++. ++.+.++.-.++.+.++|
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-----~-~~~fgeGi~~~--g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKM-----D-DSYFGEGLTLL--NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEEC-----C-TTCCEEEEEEE--TTEEEEEETTCSEEEEEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEec-----C-CCcceEEEEEe--CCEEEEEEecCCEEEEEE
Confidence 36799999986 55555543 57999999999998776542 1 11222345554 444566666689999999
Q ss_pred CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEEe
Q psy17682 245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~ 320 (490)
..+.+.+.++...... ...+++||+.++++..++.|.++|..+.+....+..... ..+..+.|. +|++++...
T Consensus 93 ~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp TTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 9999999988633121 233556788777777889999999999988887763221 125677888 787666654
Q ss_pred CCCceeEEEEecCCCCCCCeEEEecc-----------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 321 SKMSERQYSLRAPDHLDEPIVMVELD-----------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 321 ~~~~~~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
..+.|.+.|..+++....+.... .......++|+|+++.+|+++...+.+.+.++....
T Consensus 170 ---~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 170 ---QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp ---TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred ---CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 46789999999876433332211 012458999999999999999999999999987653
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.17 E-value=4.5e-08 Score=100.30 Aligned_cols=215 Identities=12% Similarity=0.024 Sum_probs=136.3
Q ss_pred CCcEEEEECCCCCccccccc-c---eeee--------------------cccccCEEEEEEeeCCCCEEEEEeCCCc---
Q psy17682 187 DCVVKVWQIPDGGISRTLTE-P---VVDL--------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNN--- 239 (490)
Q Consensus 187 dg~i~iwd~~~~~~~~~~~~-~---~~~~--------------------~~~~~~v~~~~~~p~~~~~l~s~~~dg~--- 239 (490)
+|.|..||.++|+.+..+.. + .... .++......+++.|+.. +++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccc
Confidence 78999999999998765532 1 0000 01111123578888874 7888877753
Q ss_pred ----------------EEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCc
Q psy17682 240 ----------------VAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDGS---KLLTTCKDKKMRIINPRTGA 291 (490)
Q Consensus 240 ----------------v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~ 291 (490)
|..+|.++|+.+..++. |. .+........+|+ .++.++.+|.++++|.++++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999999988874 21 1222222223564 78889999999999999999
Q ss_pred eeeeeeecC--------------------------------------CCceeEEEEeCCCcEEEEEeCC-----------
Q psy17682 292 IEEEAVCHE--------------------------------------GSKATRAIYLKSGLIFTTGFSK----------- 322 (490)
Q Consensus 292 ~~~~~~~~~--------------------------------------~~~~~~~~~s~~~~~l~~~~~~----------- 322 (490)
.+....... +.....++++|+..++.+...+
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 874332110 0011237889887777665311
Q ss_pred ------------C-------------------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682 323 ------------M-------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS 371 (490)
Q Consensus 323 ------------~-------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg 371 (490)
+ .++.|..||+.+++...... .........+...+..+ +.|+.||
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~g~~~tagglv-f~gt~dg 496 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP---YVTIFNGGTLSTAGNLV-FEGSADG 496 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE---ESSSCCCCEEEETTTEE-EEECTTS
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc---CCCCccCccceECCCEE-EEECCCC
Confidence 0 14889999999876433322 22333334556677777 5688999
Q ss_pred eEEEEEecCCCCeeEEeeeeeCC--CceeeEEEeeCceeEE
Q psy17682 372 VIRYFEITAEPPFVHYINTFQTP--DPQRGIGMMPKRGCDV 410 (490)
Q Consensus 372 ~i~iwd~~~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~ 410 (490)
.++.||.++++. +..+..+ ....-+.|..+|+..+
T Consensus 497 ~l~a~D~~tG~~----lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 497 RVIAYAADTGEK----LWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEEETTTCCE----EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEECCCCcc----ceeeeCCCCcccCceEEEECCEEEE
Confidence 999999999983 3333322 2234577888886433
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=2.8e-11 Score=114.69 Aligned_cols=201 Identities=13% Similarity=0.054 Sum_probs=110.1
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP 258 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 258 (490)
..+++++.||.|..||..+|+.+..+.. ..+.+..+..++. ++++++.|+.|+.||..+++.+..+..+.
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE---------DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC---------CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC---------CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 6899999999999999999988765431 2333444455664 67777899999999999998777665321
Q ss_pred Cc-EE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682 259 DI-VY-SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL 336 (490)
Q Consensus 259 ~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~ 336 (490)
.. +. +..+. .+..+++++.++.++.||.++++.+..+..+.. ..++|++..+++++ .++.|+.||.+++
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~---~dg~v~a~d~~tG 150 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGR---TEYTITMYDTKTR 150 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEE---EEEEEECCCSSSS
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEe---cCCEEEEEECCCC
Confidence 10 10 00111 345677888899999999999998877764431 23456777777776 6899999999987
Q ss_pred CCCeEEEeccCCCceeeeeecCCC---CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee-EEEeeCce
Q psy17682 337 DEPIVMVELDTSNGVMFPLYDPDT---NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG-IGMMPKRG 407 (490)
Q Consensus 337 ~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~-~~~sp~~~ 407 (490)
+........ ....++++++. ..+ ++++.||.|+.||..+++. +..+....++.. ..+++++.
T Consensus 151 ~~~W~~~~~----~~~~~~~~~~~~~~~~v-~~~~~dg~v~a~d~~tG~~----~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 151 ELRWNATYF----DYAASLPEDDVDYKMSH-FVSNGDGLVVTVDSESGDV----LWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp SCCCEEEEE----EECCBCCCCCTTCCCCE-EEEETSCEEEEECTTTCCE----EEEEECSSCEEEEEECTTSSC
T ss_pred CEEEeEecc----cccCccccCCccccceE-EEECCCCEEEEEECCCCcE----EEEecCCCceEEEEEecCCce
Confidence 755443321 12334444432 455 4577899999999999873 333333445433 45556664
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.13 E-value=7.7e-09 Score=97.34 Aligned_cols=196 Identities=10% Similarity=0.010 Sum_probs=133.1
Q ss_pred eCCCCEEEEEeCCCcEEEEECCCC----eeEEEEe-------cCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeC
Q psy17682 225 PTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIE-------CHPDIVYSASWNWDGSKLLTTCKD------KKMRIINP 287 (490)
Q Consensus 225 p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~ 287 (490)
++++.+++++..++.|.++|+.+. +....++ ........+...|+| .++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777767777888899999998755 5666662 112245678889999 77766555 78999999
Q ss_pred CCCceeeeeeecCC--CceeEEEEeCCCcEEEEEeC-------C---------CceeEEEEecCCCCCCCeEEEecc-CC
Q psy17682 288 RTGAIEEEAVCHEG--SKATRAIYLKSGLIFTTGFS-------K---------MSERQYSLRAPDHLDEPIVMVELD-TS 348 (490)
Q Consensus 288 ~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~-------~---------~~~~~i~iwd~~~~~~~~~~~~~~-~~ 348 (490)
.+.+.+.++..... ...+.+.|+|+++.+++..- . .....|.+||+.+.+ .......+ ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCCCC
Confidence 99999988873322 22456888999998887730 0 136889999999753 22222222 11
Q ss_pred Cceeee--eecCCCCeEEEEec-----CCCeEEEEEecCCCCeeEEeeee--eC-----------------CCceeeEEE
Q psy17682 349 NGVMFP--LYDPDTNLVYLCGK-----GDSVIRYFEITAEPPFVHYINTF--QT-----------------PDPQRGIGM 402 (490)
Q Consensus 349 ~~i~~~--~~s~~~~~l~~~g~-----~dg~i~iwd~~~~~~~~~~~~~~--~~-----------------~~~i~~~~~ 402 (490)
.....+ +|+|+++++|+++- .+++|.+|....++ + ...... .. ......+.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~-~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-W-NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-E-EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-e-eEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 234445 45999999988877 78899888876542 1 111110 00 235788999
Q ss_pred eeCceeEEeec---ceeEEEEecCC
Q psy17682 403 MPKRGCDVNSC---EIGRFFRLNNS 424 (490)
Q Consensus 403 sp~~~~l~~~~---~~~~~~~~~~~ 424 (490)
||||++|..++ +.+.+|++.+.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSST
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCC
Confidence 99999888773 48889998643
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=1.2e-07 Score=97.09 Aligned_cols=215 Identities=8% Similarity=-0.018 Sum_probs=138.7
Q ss_pred CCcEEEEECCCCCcccccccceeee----------------c---------ccccCEEEEEEeeCCCCEEEEEeCCC---
Q psy17682 187 DCVVKVWQIPDGGISRTLTEPVVDL----------------L---------YHQRRVGLVLWHPTAQNVLLTAGSDN--- 238 (490)
Q Consensus 187 dg~i~iwd~~~~~~~~~~~~~~~~~----------------~---------~~~~~v~~~~~~p~~~~~l~s~~~dg--- 238 (490)
+|.|+.+|..+++.+..+....... . +.......++++|++. +++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w 267 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPW 267 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESS
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccc
Confidence 7899999999998876553211000 0 1111223578888875 777776653
Q ss_pred ----------------cEEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCC
Q psy17682 239 ----------------NVAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDG---SKLLTTCKDKKMRIINPRTG 290 (490)
Q Consensus 239 ----------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~ 290 (490)
.|..+|.++|+.+..++. |. ....-+....+| ..++.++.+|.++++|.+++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence 599999999999988763 21 112223333467 68899999999999999999
Q ss_pred ceeeeeeecC----------CCc------------------------eeEEEEeCCCcEEEEEeCC-------------C
Q psy17682 291 AIEEEAVCHE----------GSK------------------------ATRAIYLKSGLIFTTGFSK-------------M 323 (490)
Q Consensus 291 ~~~~~~~~~~----------~~~------------------------~~~~~~s~~~~~l~~~~~~-------------~ 323 (490)
+.+....... +.+ ...++++|++.++.+...+ +
T Consensus 348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence 9887664211 000 1256889987777665321 0
Q ss_pred ---------------------------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682 324 ---------------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF 376 (490)
Q Consensus 324 ---------------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw 376 (490)
..+.|..||+.+++..... .+...+....+..++..+ +.++.||.+++|
T Consensus 428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~---~~~~~~~~g~~~~~g~~v-~~g~~dg~l~a~ 503 (677)
T 1kb0_A 428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV---EHVSPWNGGTLTTAGNVV-FQGTADGRLVAY 503 (677)
T ss_dssp CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE---EESSSCCCCEEEETTTEE-EEECTTSEEEEE
T ss_pred cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec---CCCCCCcCcceEeCCCEE-EEECCCCcEEEE
Confidence 1388999999987643322 233344555566778887 457899999999
Q ss_pred EecCCCCeeEEeeeeeCC--CceeeEEEeeCceeEE
Q psy17682 377 EITAEPPFVHYINTFQTP--DPQRGIGMMPKRGCDV 410 (490)
Q Consensus 377 d~~~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~ 410 (490)
|..+++. +..+..+ ....-+.+..+|+..+
T Consensus 504 D~~tG~~----lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 504 HAATGEK----LWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp ETTTCCE----EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ECCCCce----eeeeeCCCCcccCCEEEEeCCEEEE
Confidence 9999983 3333322 2334566778886433
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.06 E-value=3.4e-07 Score=82.29 Aligned_cols=223 Identities=6% Similarity=-0.041 Sum_probs=140.4
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..+.+++|+++++.++++-...+.|..++......... .........++++++++.+++++-...+.|.++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~-------~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI-------IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE-------ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE-------EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 45789999997656666666788999999865543211 11122467899999976556666666789999998
Q ss_pred CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 322 (490)
..................++++|++..|..+.. .+.|..+++.... ...+..........+++++++..|..+..
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~- 186 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDA- 186 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEET-
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEEC-
Confidence 643322222222356789999997665555543 3688888876432 23332112224789999998665544432
Q ss_pred CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC--CceeeE
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP--DPQRGI 400 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~i~~~ 400 (490)
..+.|..+|...... .... ........++. ++..|+++....+.|.++|..+++ .+..+..+ ....++
T Consensus 187 -~~~~I~~~~~~g~~~-~~~~--~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~----~~~~i~~g~~~~p~gi 256 (267)
T 1npe_A 187 -GTHRAECLNPAQPGR-RKVL--EGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISK----EMDTFHPHKQTRLYGI 256 (267)
T ss_dssp -TTTEEEEEETTEEEE-EEEE--ECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTE----EEEEECCSSCCCCCCE
T ss_pred -CCCEEEEEecCCCce-EEEe--cCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCC----ceEEEcccccccccee
Confidence 457899999875321 1111 12223345554 467777877778899999998876 22333222 146788
Q ss_pred EEeeCce
Q psy17682 401 GMMPKRG 407 (490)
Q Consensus 401 ~~sp~~~ 407 (490)
++.|++.
T Consensus 257 ~~~~~~~ 263 (267)
T 1npe_A 257 TIALSQC 263 (267)
T ss_dssp EEECSCC
T ss_pred eecCccC
Confidence 8888864
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.05 E-value=9.9e-09 Score=96.09 Aligned_cols=232 Identities=8% Similarity=-0.082 Sum_probs=138.5
Q ss_pred CEEEEEeCCC----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe---------CCCcEEEEEC
Q psy17682 179 NVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG---------SDNNVAIWNV 245 (490)
Q Consensus 179 ~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---------~dg~v~iwd~ 245 (490)
..+++...++ +|.+.|..+++.+..+.. ...+ .+.++|+++.++++.. .++.|.+||+
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v-------G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~ 103 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLG-------AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP 103 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-------CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeC-------CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3444444455 888999999988776542 2234 7999999974444432 3688999999
Q ss_pred CCCeeEEEEecC-------CCcEEEEEEcCCCCEEEEEeC--CCeEEE--EeCCCCceeeeeeecCCC------ceeEEE
Q psy17682 246 GTGEIMIQIECH-------PDIVYSASWNWDGSKLLTTCK--DKKMRI--INPRTGAIEEEAVCHEGS------KATRAI 308 (490)
Q Consensus 246 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~------~~~~~~ 308 (490)
.+++.+.++... ......++++|||++++++.. +..+.+ +|+.+ +.++...... .-.-+.
T Consensus 104 ~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~ 180 (368)
T 1mda_H 104 VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYL 180 (368)
T ss_dssp TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEEC
T ss_pred CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEE
Confidence 999999998643 123568999999999998875 467888 99876 3333211000 001122
Q ss_pred EeCCCcEEEEEeCC-----C-----------------------------ceeEEEEecCCCCCCCeEEEeccC-------
Q psy17682 309 YLKSGLIFTTGFSK-----M-----------------------------SERQYSLRAPDHLDEPIVMVELDT------- 347 (490)
Q Consensus 309 ~s~~~~~l~~~~~~-----~-----------------------------~~~~i~iwd~~~~~~~~~~~~~~~------- 347 (490)
++++|++++.-.+. + . +.+.+.|...... .....+..
T Consensus 181 ~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~ 258 (368)
T 1mda_H 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKA 258 (368)
T ss_dssp CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHH
T ss_pred EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcc-eEEEEEEeccccccc
Confidence 33444433322210 0 1 2344444432110 00110000
Q ss_pred ----CCceeeeeecCCCCeEEEEec---C-----CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee--
Q psy17682 348 ----SNGVMFPLYDPDTNLVYLCGK---G-----DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS-- 412 (490)
Q Consensus 348 ----~~~i~~~~~s~~~~~l~~~g~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~-- 412 (490)
..+...++++|+++.+|++.. . ++.+.++|+.+.+ .+..+..+....+++|+|||+ ++++.
T Consensus 259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~----vv~~i~vg~~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ----TSGPISNGHDSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC----EEECCEEEEEECEEEECCSSSCEEEEEET
T ss_pred cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe----EEEEEECCCCcceEEECCCCCEEEEEccC
Confidence 011122679999999987644 2 2356699999987 334444334689999999996 33433
Q ss_pred -cceeEEEEecCCCceE
Q psy17682 413 -CEIGRFFRLNNSGLCQ 428 (490)
Q Consensus 413 -~~~~~~~~~~~~~~~~ 428 (490)
++.+.++++.+.+.+.
T Consensus 335 ~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 335 GTEVLDIYDAASDQDQS 351 (368)
T ss_dssp TTTEEEEEESSSCEEEE
T ss_pred CCCeEEEEECCCCcEEE
Confidence 3578888888876443
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=4.4e-08 Score=95.60 Aligned_cols=240 Identities=6% Similarity=-0.088 Sum_probs=159.3
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccc--------------eeee--------------cc----cccCEEEEEEee--
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEP--------------VVDL--------------LY----HQRRVGLVLWHP-- 225 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~~--------------~~----~~~~v~~~~~~p-- 225 (490)
.|.||+..|.++++-+.+++.++.+..- ...+ .+ ..+.......+.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 4677888888999888887776554300 0000 00 011122244444
Q ss_pred ---CCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEEEEEE-c-CCCCEEEEEe------------------CCCe
Q psy17682 226 ---TAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASW-N-WDGSKLLTTC------------------KDKK 281 (490)
Q Consensus 226 ---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~dg~ 281 (490)
+|+.+++....+..|.+.|+.+.+....+.- .......+++ + |+++++++++ .++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7765566555677899999999998775441 3456888888 5 8999998885 2457
Q ss_pred EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce-----------------------------------e
Q psy17682 282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE-----------------------------------R 326 (490)
Q Consensus 282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~-----------------------------------~ 326 (490)
+.+.|..+.+...++..... ...++++|+|+++.+.+.+... +
T Consensus 177 vtvID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEEEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 99999999988888875332 6778899999988887743211 1
Q ss_pred EEEEecCCC--CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC--------eeEEeeeeeCCCc
Q psy17682 327 QYSLRAPDH--LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP--------FVHYINTFQTPDP 396 (490)
Q Consensus 327 ~i~iwd~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~ 396 (490)
.|.+.|.++ ...... .+........+.++|||+++++++..+.+|.++|+.+.+. -.........+..
T Consensus 255 ~V~VID~~~~~~~~~~~--~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g 332 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTR--YIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 332 (595)
T ss_dssp TEEEEECSGGGCCSSEE--EEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC
T ss_pred cEEEEeCcccCCceeEE--EEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC
Confidence 366666665 222111 1222234677899999999999999999999999996420 0012233344556
Q ss_pred eeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682 397 QRGIGMMPKRGCDVNS--CEIGRFFRLNN 423 (490)
Q Consensus 397 i~~~~~sp~~~~l~~~--~~~~~~~~~~~ 423 (490)
...++|+|+|...++. ++.+..|++..
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 8999999999433333 56888899877
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.99 E-value=5.8e-08 Score=84.78 Aligned_cols=183 Identities=8% Similarity=0.077 Sum_probs=126.3
Q ss_pred eeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 168 VLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 168 V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
...+.|+ ++ .++.+.+.+| .|+++|+++++.+..+..+ ....-..++. .++.+.+..-.++.+.+||.
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~------~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG------KRYFGEGISD--WKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC------TTCCEEEEEE--ETTEEEEEESSSSEEEEEET
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC------CccceeEEEE--eCCEEEEEEeeCCEEEEEEC
Confidence 4788898 55 7777777776 8999999999987765421 1111123444 34445555556899999999
Q ss_pred CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-C---CceeEEEEeCCCcEEEEEeC
Q psy17682 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-G---SKATRAIYLKSGLIFTTGFS 321 (490)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~---~~~~~~~~s~~~~~l~~~~~ 321 (490)
.+.+.+.++..... ...++++++.|+.+..++.|.++|..+.+.+.++.... + ..+..+.|. +|++++...
T Consensus 115 ~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w- 189 (262)
T 3nol_A 115 RNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW- 189 (262)
T ss_dssp TTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET-
T ss_pred ccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc-
Confidence 99999999884322 23334567777777778889999999999888876422 1 124557776 787776664
Q ss_pred CCceeEEEEecCCCCCCCeEEEec----------cCCCceeeeeecCCCCeEEEEe
Q psy17682 322 KMSERQYSLRAPDHLDEPIVMVEL----------DTSNGVMFPLYDPDTNLVYLCG 367 (490)
Q Consensus 322 ~~~~~~i~iwd~~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~~~g 367 (490)
....|.+.|..+++....+... ......+.++|+|+++.||++|
T Consensus 190 --~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 190 --QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp --TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred --cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 4678999999887643333221 0112458899999999998888
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=2.8e-06 Score=76.21 Aligned_cols=234 Identities=7% Similarity=-0.030 Sum_probs=138.3
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD 259 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 259 (490)
+|+.+.. +.|+.+++...... .+.. ...+......+.+++|++++..++++-..++.|..+++..+.....+.....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~-~~~~-~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMK-KTEA-KAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBC-GGGC-EEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred EEEEEcC-CeEEEEEecCcccc-cccc-eeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 4444443 47888887654331 1110 0001112345789999997655666666678999999876554333333335
Q ss_pred cEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCC
Q psy17682 260 IVYSASWNWDGSKLL-TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLD 337 (490)
Q Consensus 260 ~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~ 337 (490)
....+++++++..|+ +-...+.|.++++..... ..+..........++++|+ +.++++.. ....+.|..++++...
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~-~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDW-NRDNPKIETSHMDGTN 157 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEEC-CSSSCEEEEEETTSCC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEEC-CCCCcEEEEEecCCCC
Confidence 688999999765554 445578899999875432 2232222234789999996 55555443 1114678888876432
Q ss_pred CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--e
Q psy17682 338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--I 415 (490)
Q Consensus 338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~ 415 (490)
...+.. ........+++++++..||++-...+.|.+++..... ..... .......+++.. .+.+.++... .
T Consensus 158 -~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~---~~~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 158 -RRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVL---EGLQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp -CEEEEC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEE---ECCCSEEEEEEE-TTEEEEEETTTTE
T ss_pred -cEEEEE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-eEEEe---cCCCCceEEEEe-CCEEEEEECCCCe
Confidence 222221 2234578899999999998888888999999987543 11122 222334567665 4455555433 4
Q ss_pred eEEEEecCCC
Q psy17682 416 GRFFRLNNSG 425 (490)
Q Consensus 416 ~~~~~~~~~~ 425 (490)
+..++..+++
T Consensus 231 v~~~d~~~g~ 240 (267)
T 1npe_A 231 VIAMDLAISK 240 (267)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeCCCCC
Confidence 4445544444
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=4.9e-07 Score=92.46 Aligned_cols=190 Identities=10% Similarity=0.039 Sum_probs=124.4
Q ss_pred eEEEECCCCCCEEEEEeCCC-------------------cEEEEECCCCCccccccccee---eecccccCEEEEEEeeC
Q psy17682 169 LDIAWSPHDDNVIASGSEDC-------------------VVKVWQIPDGGISRTLTEPVV---DLLYHQRRVGLVLWHPT 226 (490)
Q Consensus 169 ~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~p~ 226 (490)
..++++|++ .+++.+..++ .|..+|.++++....+..... .... ......+....+
T Consensus 246 ~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~-~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS-TQPMILADIKIA 323 (677)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC-CSCCEEEEEEET
T ss_pred cceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc-CCCcEEEecccC
Confidence 467888887 6777776654 599999999988766542100 0000 112223334446
Q ss_pred CC--CEEEEEeCCCcEEEEECCCCeeEEEEecCC-----------CcE------------------------EEEEEcCC
Q psy17682 227 AQ--NVLLTAGSDNNVAIWNVGTGEIMIQIECHP-----------DIV------------------------YSASWNWD 269 (490)
Q Consensus 227 ~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~ 269 (490)
|+ ..++.++.+|.+.++|.++|+.+..+.... ..+ ..++++|+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 62 378899999999999999999887765221 011 14688998
Q ss_pred CCEEEEEeCC-------------------------------------------CeEEEEeCCCCceeeeeeecCCCceeE
Q psy17682 270 GSKLLTTCKD-------------------------------------------KKMRIINPRTGAIEEEAVCHEGSKATR 306 (490)
Q Consensus 270 ~~~l~~~~~d-------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 306 (490)
..++++...+ |.|..||+.+++.+.++..... ...
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~--~~~ 481 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP--WNG 481 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS--CCC
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC--CcC
Confidence 8887775432 7899999999998888764322 334
Q ss_pred EEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682 307 AIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 307 ~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
..+...+.+++.++ .++.+++||.++++....+.. .......-+.|..+|+.+++.
T Consensus 482 g~~~~~g~~v~~g~---~dg~l~a~D~~tG~~lw~~~~-~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 482 GTLTTAGNVVFQGT---ADGRLVAYHAATGEKLWEAPT-GTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CEEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEE
T ss_pred cceEeCCCEEEEEC---CCCcEEEEECCCCceeeeeeC-CCCcccCCEEEEeCCEEEEEE
Confidence 44566666777776 689999999999875443332 222223445667888765454
No 237
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=7.7e-06 Score=85.73 Aligned_cols=335 Identities=10% Similarity=0.006 Sum_probs=189.1
Q ss_pred ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682 43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY 122 (490)
Q Consensus 43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 122 (490)
+...|.++...+++ .+.+....+| +.+||..++.+.. ...............|.++...++.
T Consensus 213 ~~~~i~~i~~d~~g-~lwigt~~~G-l~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~i~~i~~d~~g 274 (795)
T 4a2l_A 213 GTKQIQAILQQSPT-RIWVATEGAG-LFLINPKTKEIKN----------------YLHSPSNPKSISSNYIRSLAMDSQN 274 (795)
T ss_dssp -CCCEEEEEEEETT-EEEEEEBSSC-EEEEETTTTEEEE----------------ECCCTTCTTSCSCSBEEEEEECTTS
T ss_pred CCCeeEEEEEcCCC-CEEEEECCCC-eEEEeCCCCeEEE----------------eecCCCCccccCCCeEEEEEEcCCC
Confidence 34678888888877 5655443334 7788877643110 0000000001112346666665553
Q ss_pred ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCc----ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADH----ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~----~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
.++.+... .+.+++.. .+...... ....-....|.++...++| .|..|+.++-|..|+..++
T Consensus 275 ------~lWigt~~-Gl~~~~~~-----~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 275 ------RLWIGTFN-DLNIYHEG-----TDSFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp ------CEEEEESS-CEEEEETT-----TTEEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGG
T ss_pred ------CEEEEeCC-hhheEcCC-----CCeEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcc
Confidence 24444444 46666653 11110000 0001134679999999877 3666777778999986544
Q ss_pred CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--------CCCcEEEEEEcCCC
Q psy17682 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--------HPDIVYSASWNWDG 270 (490)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~ 270 (490)
.... +......-.-....|.++...++|. |..|+.++-|..|+..+++....... ....|.++...+++
T Consensus 341 ~~~~-~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 341 RFKN-IRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp SSEE-ECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cceE-EcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 3211 1100000001245699998888874 66677777799999877654332211 23568999998888
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-- 345 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-- 345 (490)
+.|..|+.++-|..||..+++...-... .....+.++...++|.+.+... +.+.+||..+... ......
T Consensus 418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-----~Gl~~~~~~~~~~-~~~~~~~~ 491 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-----SALVRFNPEQRSF-TTIEKEKD 491 (795)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-----SCEEEEETTTTEE-EECCBCTT
T ss_pred CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-----CceeEEeCCCCeE-EEcccccc
Confidence 8677788878899999987764332110 1123488888888888666542 3477888765421 111100
Q ss_pred ---cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee--ee--eCCCceeeEEEeeCceeEEeecceeEE
Q psy17682 346 ---DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN--TF--QTPDPQRGIGMMPKRGCDVNSCEIGRF 418 (490)
Q Consensus 346 ---~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--~~--~~~~~i~~~~~sp~~~~l~~~~~~~~~ 418 (490)
-....|.++..+++|+.. +.. . +-+..|+..+++ + .... .. .....|.++...++|.+.+++.+-+..
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lW-igt-~-~Gl~~~~~~~~~-~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~ 566 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLW-IGG-E-EGLSVFKQEGLD-I-QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYC 566 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEE-EEE-S-SCEEEEEEETTE-E-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEE
T ss_pred ccccCCceEEEEEECCCCCEE-EEe-C-CceEEEeCCCCe-E-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCcee
Confidence 012458888899999876 333 3 458889988764 2 1110 00 122468888888888876665443444
Q ss_pred EEecC
Q psy17682 419 FRLNN 423 (490)
Q Consensus 419 ~~~~~ 423 (490)
|+..+
T Consensus 567 ~d~~~ 571 (795)
T 4a2l_A 567 FNEKD 571 (795)
T ss_dssp EETTT
T ss_pred ECCCC
Confidence 44433
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.92 E-value=2.6e-07 Score=85.73 Aligned_cols=204 Identities=14% Similarity=0.071 Sum_probs=129.9
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP 258 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 258 (490)
..+..++.++.|..+|.. ++...... .....+.++...+++. +..++.++.|..+|.. ++.+..+....
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~-------~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFK-------TKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEE-------CSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEc-------CCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 467778888999999987 65543322 1333455666666663 6667788999999998 88777776555
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682 259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE 338 (490)
Q Consensus 259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~ 338 (490)
..+.++...+++..++ ++ +.|..+| .+++.......... .+.++...++|.+.+... ++.+..+|.. +..
T Consensus 177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t~----~~gl~~~~~~-g~~ 246 (330)
T 3hxj_A 177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGTIYVTSL----DGHLYAINPD-GTE 246 (330)
T ss_dssp CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSCEEEEET----TTEEEEECTT-SCE
T ss_pred CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCeEEEEcC----CCeEEEECCC-CCE
Confidence 6677777877777554 44 8899999 77776666554333 377888888887776553 5667777743 232
Q ss_pred CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee
Q psy17682 339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~ 412 (490)
.... . .....+..+...+++... .++.+|.|..+|. +++.. ..+. ....+.++...+++.+.+.+
T Consensus 247 ~~~~-~-~~~~~~~~~~~~~~g~l~--v~t~~ggl~~~d~-~g~~~----~~~~~~~~~~~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 247 KWRF-K-TGKRIESSPVIGNTDTIY--FGSYDGHLYAINP-DGTEK----WNFETGSWIIATPVIDENGTIYFGT 312 (330)
T ss_dssp EEEE-E-CSSCCCSCCEECTTSCEE--EECTTCEEEEECT-TSCEE----EEEECSSCCCSCCEECTTCCEEEEC
T ss_pred eEEe-e-CCCCccccceEcCCCeEE--EecCCCCEEEECC-CCcEE----EEEEcCCccccceEEcCCCEEEEEc
Confidence 1111 1 122224456666666544 4667888999985 55522 2222 23456677777777665544
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.91 E-value=5.1e-07 Score=78.19 Aligned_cols=186 Identities=11% Similarity=0.092 Sum_probs=126.9
Q ss_pred CCeeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
.-.-++.|++ + .++.+.+.+| .|+.+|+++++.+..+..+ .+ ..-..++.. ++.+++..-.++.+.+|
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-----~~-~fgeGi~~~--~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-----PP-YFGAGIVAW--RDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-----TT-CCEEEEEEE--TTEEEEEESSSSEEEEE
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-----CC-cceeEEEEe--CCEEEEEEeeCCEEEEE
Confidence 3456899986 4 6777777754 8999999999987765421 11 111233443 44466666678999999
Q ss_pred ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEE
Q psy17682 244 NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 244 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~ 319 (490)
|..+.+.+.++..... -..++ +++..|+.+..++.|.++|..+.+.+.++..... ..+..+.+. +|++++..
T Consensus 91 D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 91 DLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp ETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 9999999999984332 23444 5677777777789999999999998888773221 124566665 77777665
Q ss_pred eCCCceeEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEec
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
. ....|.+.|..+++....+... ......+.++++|+++.||++|-
T Consensus 167 w---~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 167 W---LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp T---TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred C---CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4 3568889999887643333211 11124688999999999988883
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.91 E-value=4.8e-06 Score=78.88 Aligned_cols=224 Identities=10% Similarity=0.054 Sum_probs=130.1
Q ss_pred EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682 129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV 208 (490)
Q Consensus 129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 208 (490)
.+..+..++.+..++.. +++... ............... + ..++.++.++.|..+|..+++.........
T Consensus 105 ~v~v~~~~g~l~a~d~~-----tG~~~W---~~~~~~~~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTS-----DGTVAW---QTKVAGEALSRPVVS--D-GLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EEEEEETTSEEEEEETT-----TCCEEE---EEECSSCCCSCCEEE--T-TEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred EEEEEcCCCEEEEEECC-----CCCEEE---EEeCCCceEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 35556677888888874 333211 111111111111222 3 478888899999999999998766543211
Q ss_pred ee--ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCc----EE---EEEEcC--CCCEEEEEe
Q psy17682 209 VD--LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDI----VY---SASWNW--DGSKLLTTC 277 (490)
Q Consensus 209 ~~--~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~l~~~~ 277 (490)
.. ...... .... ++ .++.+..++.+..+|..+++.+......... +. .+.-.| .+..++.++
T Consensus 174 ~~~~~~~~~~----~~~~-~~--~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~ 246 (376)
T 3q7m_A 174 PSLSLRGESA----PTTA-FG--AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA 246 (376)
T ss_dssp -----CCCCC----CEEE-TT--EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC
T ss_pred CceeecCCCC----cEEE-CC--EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe
Confidence 10 011111 1122 33 6778888999999999999988776532110 00 011112 356778888
Q ss_pred CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682 278 KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD 357 (490)
Q Consensus 278 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 357 (490)
.++.+..+|.++++.+..... .. ...+... ++ .+..++ .++.+..+|..+++........ .......+...
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~~--~~-~~~~~~~-~~-~l~~~~---~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~ 317 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKREL--GS-VNDFIVD-GN-RIYLVD---QNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLY 317 (376)
T ss_dssp TTSCEEEEETTTCCEEEEECC--CC-EEEEEEE-TT-EEEEEE---TTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEE
T ss_pred cCcEEEEEECCCCcEEeeccC--CC-CCCceEE-CC-EEEEEc---CCCeEEEEECCCCcEEEeeccc-CCCcccCCEEE
Confidence 899999999999988766542 21 3334333 34 444444 4778999999887632222111 11223333332
Q ss_pred CCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 358 PDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 358 ~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+..| +.++.+|.+.++|..+++
T Consensus 318 --~~~l-~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 318 --NGNL-VVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp --TTEE-EEECTTSEEEEEETTTCC
T ss_pred --CCEE-EEEeCCCeEEEEECCCCc
Confidence 4566 467789999999999987
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=4e-07 Score=79.52 Aligned_cols=184 Identities=7% Similarity=0.010 Sum_probs=129.5
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~ 246 (490)
-...+.|+. +.++.+.+.+|.|+++|+++++.+..+ .+ ....-..+++ .++.+.+..-.++.+.+||..
T Consensus 56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~------~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL------GNIFAEGLAS--DGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC------TTCCEEEEEE--CSSCEEEEESSSCEEEEEETT
T ss_pred ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC------CCcceeEEEE--eCCEEEEEEccCCEEEEEECC
Confidence 346888873 478888899999999999999887764 21 1111233444 444566666678999999999
Q ss_pred CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEEeCC
Q psy17682 247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~~~ 322 (490)
+.+.+.++... ..-..++ ++++.|+.+..++.|.++|..+.+.+.++..... ..+..+.|. +|++++...
T Consensus 125 Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw-- 198 (268)
T 3nok_A 125 PPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW-- 198 (268)
T ss_dssp TTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--
T ss_pred cCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC--
Confidence 99999998843 2223444 5688888887889999999999998888763221 124667777 787776654
Q ss_pred CceeEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEec
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
....|.+.|..+++....+... ......+.++++|+++.||++|-
T Consensus 199 -~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 199 -HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp -TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred -CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 4678999999987643333221 01134688999999999988883
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=2e-05 Score=82.62 Aligned_cols=331 Identities=9% Similarity=-0.013 Sum_probs=191.4
Q ss_pred cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682 44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV 123 (490)
Q Consensus 44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 123 (490)
...|.++...+++ .+.+.. .+ -|.+++..++.+.. ...............|.++...+++
T Consensus 262 ~~~i~~i~~d~~g-~lWigt-~~-Gl~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~i~~i~~D~~g- 321 (795)
T 4a2l_A 262 SNYIRSLAMDSQN-RLWIGT-FN-DLNIYHEGTDSFAS----------------YSSNPVENGSLSQRSVRSIFMDSQG- 321 (795)
T ss_dssp CSBEEEEEECTTS-CEEEEE-SS-CEEEEETTTTEEEE----------------ECCCTTSTTSCSSSCEEEEEECTTS-
T ss_pred CCeEEEEEEcCCC-CEEEEe-CC-hhheEcCCCCeEEE----------------EecCCCCCCCCCCCcEEEEEEeCCc-
Confidence 3569999998888 555433 34 47888877643210 0000000111122346677666654
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcce----eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHAL----VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 199 (490)
.++.+..++.+..++.. ..... .+.. -.-....|.++...++| .|..|+.++-|..|+..+++
T Consensus 322 -----~lWigt~~~Gl~~~~~~-----~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 322 -----GMWLGTYFGGLNYYHPI-----RNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQR 388 (795)
T ss_dssp -----CEEEEESSSCEEEECGG-----GGSSE-EECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCC
T ss_pred -----CEEEEECCCCeEEeCCC-----cccce-EEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCc
Confidence 46667776777777653 11110 0000 00124569999998877 35667778789999977665
Q ss_pred cccccccceeee-cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----cCCCcEEEEEEcCCCCEE
Q psy17682 200 ISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----CHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 200 ~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l 273 (490)
.......+...- .-....|.++...+++ ++|..|+.++-|.++|..+++... +. .....|.++...++|++.
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEE
Confidence 422111100000 0124578999888877 347778887789999988776433 32 124579999988888755
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeee-----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVC-----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE---- 344 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~---- 344 (490)
+. +. +.+.+||..+++....... .....+.++...++|.+.+... +.+..||..+... ....
T Consensus 467 ig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----~Gl~~~~~~~~~~--~~~~~~~~ 537 (795)
T 4a2l_A 467 LG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-----EGLSVFKQEGLDI--QKASILPV 537 (795)
T ss_dssp EE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-----SCEEEEEEETTEE--EECCCSCS
T ss_pred EE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-----CceEEEeCCCCeE--EEecCCCC
Confidence 54 44 4588999887654322111 1123478888888888766542 3477777765432 1110
Q ss_pred -ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682 345 -LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 345 -~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~ 421 (490)
.-....|.++..+++|+.. ++. .. -+..||..+++ +. ...... ....|.++...++|.+.+++..-+..|+.
T Consensus 538 ~~l~~~~i~~i~~d~~g~lW-igT-~~-Gl~~~d~~~~~-~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~ 612 (795)
T 4a2l_A 538 SNVTKLFTNCIYEASNGIIW-VGT-RE-GFYCFNEKDKQ-IK-RYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNP 612 (795)
T ss_dssp CGGGGSCEEEEEECTTSCEE-EEE-SS-CEEEEETTTTE-EE-EECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEET
T ss_pred CCCCCCeeEEEEECCCCCEE-EEe-CC-CceeECCCCCc-EE-EeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcC
Confidence 0112358888889999876 333 33 57888876653 22 221111 12458888888888877776655555554
Q ss_pred cC
Q psy17682 422 NN 423 (490)
Q Consensus 422 ~~ 423 (490)
.+
T Consensus 613 ~~ 614 (795)
T 4a2l_A 613 ET 614 (795)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.85 E-value=9.7e-07 Score=78.08 Aligned_cols=193 Identities=11% Similarity=-0.051 Sum_probs=125.0
Q ss_pred CEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCC-CcEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCce
Q psy17682 217 RVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHP-DIVYSASWNWDGSKLL-TTCKDKKMRIINPRTGAI 292 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~ 292 (490)
....+.|++++ .++++.+. ++.|+++|+.+++.+..+.-.. .....+++. +..|. +.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 36899999986 35555543 5799999999999988876222 223355555 44444 444688999999999999
Q ss_pred eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEEEecC
Q psy17682 293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYLCGKG 369 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~g~~ 369 (490)
+.++..... ....+++||..+.++. ..+.|.++|..+.+....+..-... ...+.+.|. +| .+|+....
T Consensus 99 ~~~i~~g~~---~g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~ 170 (266)
T 2iwa_A 99 IKNFTHQMK---DGWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQ 170 (266)
T ss_dssp EEEEECCSS---SCCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred EEEEECCCC---CeEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCC
Confidence 888863311 1233556777666554 3679999999886643333321111 135677777 66 66677777
Q ss_pred CCeEEEEEecCCCCeeEEeeeee-----------CCCceeeEEEeeCce-eEEeecceeEEEEe
Q psy17682 370 DSVIRYFEITAEPPFVHYINTFQ-----------TPDPQRGIGMMPKRG-CDVNSCEIGRFFRL 421 (490)
Q Consensus 370 dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~i~~~~~sp~~~-~l~~~~~~~~~~~~ 421 (490)
++.|.+-|..+++. ...+..-. .....++++|+|++. +++++....+++.+
T Consensus 171 ~~~V~vID~~tg~V-~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 171 TDCIARISAKDGTL-LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp SSEEEEEETTTCCE-EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CCeEEEEECCCCcE-EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence 88999999999983 22332110 012458999999975 45555444444443
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.81 E-value=7.6e-07 Score=91.24 Aligned_cols=238 Identities=10% Similarity=-0.001 Sum_probs=148.2
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEE
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMI 252 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~ 252 (490)
..++.++.|+.|..+|.++|+.+..+..... ......+.+.-.-.++ .++.++ .++.|..||.++|+.+.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~--~~~~~~~~~sP~v~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRAD--HKRSYTITGAPRVVNG--KVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSC--TTSCCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCC--CCCCccccCCcEEECC--EEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 5788888999999999999988765432100 0000011100001133 444443 36899999999999988
Q ss_pred EEecCC-------------------------------CcEEEEEEcCCCCEEEEEeCCCe-------------------E
Q psy17682 253 QIECHP-------------------------------DIVYSASWNWDGSKLLTTCKDKK-------------------M 282 (490)
Q Consensus 253 ~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~-------------------i 282 (490)
.+.... .....++++|+...++.++.++. |
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 875210 01125788898889999887764 9
Q ss_pred EEEeCCCCceeeeeeecCC--------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----
Q psy17682 283 RIINPRTGAIEEEAVCHEG--------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD----- 346 (490)
Q Consensus 283 ~iwd~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~----- 346 (490)
..+|..+++.+..+..... ..........+|+ .++.++ .++.++++|.++++.........
T Consensus 278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 354 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP---KNGFFYVIDRATGELLSAKGIVPQSWTK 354 (689)
T ss_dssp EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC---TTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC---CCCeEEEEECCCCCEecccccccccccc
Confidence 9999999999887763211 1122222333565 677776 68999999999876432111100
Q ss_pred ---------------------C-----------CCceeeeeecCCCCeEEEEec--------------------------
Q psy17682 347 ---------------------T-----------SNGVMFPLYDPDTNLVYLCGK-------------------------- 368 (490)
Q Consensus 347 ---------------------~-----------~~~i~~~~~s~~~~~l~~~g~-------------------------- 368 (490)
. ...-..++|+|+...+|+...
T Consensus 355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0 000123788999888865321
Q ss_pred ------------------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682 369 ------------------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC 427 (490)
Q Consensus 369 ------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~ 427 (490)
.+|.|+.||+.+++ .+..+..+.+..+-.++..+.+++.+ ++.++.|+..+++.+
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~----~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ----AAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTE----EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCC----eEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 14789999999997 33334444455555677666665555 457888888888744
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=1.6e-09 Score=102.57 Aligned_cols=143 Identities=11% Similarity=0.089 Sum_probs=79.3
Q ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCce-eEE
Q psy17682 229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKA-TRA 307 (490)
Q Consensus 229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 307 (490)
..+++++.|+.|+.||..+|+.+.++.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+....+ ...
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 3789999999999999999999988875 4555555566777888888999999999999887665542211001 001
Q ss_pred EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
.+.. +..+++++ .++.++.||..+++....... .. ...++|++..+ ++++.|+.|+.||..+++..
T Consensus 88 ~~~~-~~~v~~g~---~dg~v~a~D~~tG~~~w~~~~---~~---~~~~~p~~~~v-~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 88 CRSS-DGILYMGK---KQDIWYVIDLLTGEKQQTLSS---AF---ADSLSPSTSLL-YLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp CC------CCCCE---EEEEEEEECCC----------------------------E-EEEEEEEEEECCCSSSSSCC
T ss_pred eEec-CCEEEEEe---CCCEEEEEECCCCcEEEEecC---CC---cccccccCCEE-EEEecCCEEEEEECCCCCEE
Confidence 1112 33455555 589999999998775433221 11 23456777777 56778999999999998743
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=1.8e-06 Score=75.47 Aligned_cols=195 Identities=10% Similarity=0.029 Sum_probs=125.2
Q ss_pred cccC--EEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy17682 214 HQRR--VGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR 288 (490)
Q Consensus 214 ~~~~--v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~ 288 (490)
|... ...+.|+ ++ .++.+.+.+| .|+++|+.+++.+.++... .........+++..|.... .++.+.+||..
T Consensus 39 hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 39 HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 5443 4788998 55 4777777766 8999999999998888743 3333322333355555444 68999999999
Q ss_pred CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEE
Q psy17682 289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYL 365 (490)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~ 365 (490)
+.+.+.++..... - ..+.+++..|..+. ..+.|.++|..+.+....+...... ..++.+.|. +| .|++
T Consensus 116 t~~~~~ti~~~~e--G--~glt~dg~~L~~Sd---Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lya 186 (262)
T 3nol_A 116 NLRQVRSFNYDGE--G--WGLTHNDQYLIMSD---GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFA 186 (262)
T ss_dssp TCCEEEEEECSSC--C--CCEEECSSCEEECC---SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred cCcEEEEEECCCC--c--eEEecCCCEEEEEC---CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEE
Confidence 9999998874322 1 23335666666554 3678999999986643333221111 234456776 66 5667
Q ss_pred EecCCCeEEEEEecCCCCeeEEeee--e--------eCCCceeeEEEeeCc-eeEEeecceeEEEEe
Q psy17682 366 CGKGDSVIRYFEITAEPPFVHYINT--F--------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRL 421 (490)
Q Consensus 366 ~g~~dg~i~iwd~~~~~~~~~~~~~--~--------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~ 421 (490)
..-.+..|.+.|..+++ ....+.. + ....-.+++||+|++ .+++++-.--++|.+
T Consensus 187 n~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp EETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred EEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 77678899999999987 2222221 1 011345899999976 455555555566654
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.76 E-value=1.3e-05 Score=74.04 Aligned_cols=240 Identities=10% Similarity=-0.021 Sum_probs=139.8
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee-------------eecccccCEEEEEEee-CCCCEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV-------------DLLYHQRRVGLVLWHP-TAQNVL 231 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~p-~~~~~l 231 (490)
....+++|.+++ ++++++..++.|..|+..+++. ..+..+.. ........+.++++.+ ++ .|
T Consensus 19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~l 94 (322)
T 2fp8_A 19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--QL 94 (322)
T ss_dssp SCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--EE
T ss_pred CCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCC--cE
Confidence 456788999987 7677888889999998765443 21110000 0000123578999997 55 35
Q ss_pred EEEeCCCcEEEEECCCCeeEEEEec-----CCCcEEEEEEcC-CCCEEEEEeC-----------------CCeEEEEeCC
Q psy17682 232 LTAGSDNNVAIWNVGTGEIMIQIEC-----HPDIVYSASWNW-DGSKLLTTCK-----------------DKKMRIINPR 288 (490)
Q Consensus 232 ~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~ 288 (490)
+.+...+.|..+|..+++. ..+.. .......+++.+ +|+++++... ++.|..||..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 5555555688888775542 22211 123478899999 9987776432 3679999987
Q ss_pred CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682 289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
+++......... ....++++++|+.|..+.. ..+.|..+++..... ...+.. ... ...++++++|++. ++
T Consensus 174 ~~~~~~~~~~~~--~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~-va 245 (322)
T 2fp8_A 174 TKETTLLLKELH--VPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFW-VS 245 (322)
T ss_dssp TTEEEEEEEEES--CCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEE-EE
T ss_pred CCEEEEeccCCc--cCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEE-EE
Confidence 765433222212 2677999999986555431 457899998875321 111222 122 6778999999865 44
Q ss_pred ecC----------CCeEEEEEecCCCCeeEEeeeeeC--CCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682 367 GKG----------DSVIRYFEITAEPPFVHYINTFQT--PDPQRGIGMMPKRGCDVNSCE--IGRFFRL 421 (490)
Q Consensus 367 g~~----------dg~i~iwd~~~~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~--~~~~~~~ 421 (490)
... .+.|..+|.. ++ ....+..... -..+.++++ .++.+.+++.. .+..+++
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred ecCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 433 4567777753 43 2222221111 124566666 46666666433 3344443
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.75 E-value=2.5e-06 Score=78.99 Aligned_cols=217 Identities=13% Similarity=0.051 Sum_probs=136.7
Q ss_pred EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682 129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV 208 (490)
Q Consensus 129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 208 (490)
.+..+..++.+..++.. ++ .......+...+.++...+++ . +..++.++.|..+|.. ++....+..
T Consensus 109 ~l~v~t~~~~l~~~d~~------g~---~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~-- 174 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD------GT---EKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKT-- 174 (330)
T ss_dssp EEEEECTTSEEEEECTT------SC---EEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEEC--
T ss_pred EEEEEecCCEEEEEcCC------CC---EEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEec--
Confidence 45566777888888763 22 111223344456677777766 3 6667788999999987 665443321
Q ss_pred eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy17682 209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR 288 (490)
Q Consensus 209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 288 (490)
....+.++...+++. +..++ +.|..+| .+++.+..+......+.++...++|. |..++.++.+..+|.
T Consensus 175 -----~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~- 242 (330)
T 3hxj_A 175 -----NDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP- 242 (330)
T ss_dssp -----SSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-
T ss_pred -----CCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-
Confidence 334566677767764 44555 7899999 77777777765556688888887775 555677788998984
Q ss_pred CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682 289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
+++....+..... ....+...+++.+.+.. .++.+..+|. +++. ...... ....+.++..+++|+.. .|+
T Consensus 243 ~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t----~~ggl~~~d~-~g~~-~~~~~~-~~~~~~~~~~d~~g~l~--~gt 312 (330)
T 3hxj_A 243 DGTEKWRFKTGKR-IESSPVIGNTDTIYFGS----YDGHLYAINP-DGTE-KWNFET-GSWIIATPVIDENGTIY--FGT 312 (330)
T ss_dssp TSCEEEEEECSSC-CCSCCEECTTSCEEEEC----TTCEEEEECT-TSCE-EEEEEC-SSCCCSCCEECTTCCEE--EEC
T ss_pred CCCEeEEeeCCCC-ccccceEcCCCeEEEec----CCCCEEEECC-CCcE-EEEEEc-CCccccceEEcCCCEEE--EEc
Confidence 5666655553332 24455666677666544 4667888885 3332 222221 23446677777888765 477
Q ss_pred CCCeEEEEEecCC
Q psy17682 369 GDSVIRYFEITAE 381 (490)
Q Consensus 369 ~dg~i~iwd~~~~ 381 (490)
.+|.+++......
T Consensus 313 ~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 313 RNGKFYALFNLEH 325 (330)
T ss_dssp TTSCEEEEEC---
T ss_pred CCCeEEEEecccc
Confidence 8999988776654
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=2.4e-05 Score=79.93 Aligned_cols=213 Identities=9% Similarity=0.077 Sum_probs=130.2
Q ss_pred CCcEEEEECCCCCcccccccc----eeee--------------------cccccCEEEEEEeeCCCCEEEEEeCCC----
Q psy17682 187 DCVVKVWQIPDGGISRTLTEP----VVDL--------------------LYHQRRVGLVLWHPTAQNVLLTAGSDN---- 238 (490)
Q Consensus 187 dg~i~iwd~~~~~~~~~~~~~----~~~~--------------------~~~~~~v~~~~~~p~~~~~l~s~~~dg---- 238 (490)
+|.|..+|.++|+.+..+... .... .++......+++.|+.. +++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWN 255 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccc
Confidence 589999999999987765321 0000 01111123567888774 777777665
Q ss_pred ---------------cEEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCc
Q psy17682 239 ---------------NVAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDGS---KLLTTCKDKKMRIINPRTGA 291 (490)
Q Consensus 239 ---------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~ 291 (490)
.|..+|.++|+.+..++. |. .+.....+..+|+ .++.++.+|.++++|..+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 399999999999988873 22 2233333334665 68889999999999999999
Q ss_pred eeeeeeecC-----------CC------------------------ceeEEEEeCCCcEEEEEeC---------------
Q psy17682 292 IEEEAVCHE-----------GS------------------------KATRAIYLKSGLIFTTGFS--------------- 321 (490)
Q Consensus 292 ~~~~~~~~~-----------~~------------------------~~~~~~~s~~~~~l~~~~~--------------- 321 (490)
.+....... +. ....++++|+..++.+...
T Consensus 336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 415 (668)
T 1kv9_A 336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT 415 (668)
T ss_dssp EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence 874432111 00 0112678887655543210
Q ss_pred ------------------CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 322 ------------------KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 322 ------------------~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
...++.|..||+.+++....... ........+...+..+ +.|+.|+.++.||..+++.
T Consensus 416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v-f~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTAGNLV-FQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEE-EEECTTSEEEEEETTTCCE
T ss_pred ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeCCCEE-EEECCcccchhhhhhcChh
Confidence 01248899999998764333322 2233333444567777 5678999999999999983
Q ss_pred eeEEeeeeeCCCce--eeEEEeeCcee
Q psy17682 384 FVHYINTFQTPDPQ--RGIGMMPKRGC 408 (490)
Q Consensus 384 ~~~~~~~~~~~~~i--~~~~~sp~~~~ 408 (490)
+ ..+..+..+ .-+.+..+|+.
T Consensus 492 l----~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 492 L----WQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp E----EEEECSSCCCSCCEEEEETTEE
T ss_pred h----eEecCCCCcccCceEEEECCEE
Confidence 3 333322222 33455567653
No 250
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.74 E-value=6.7e-05 Score=68.98 Aligned_cols=207 Identities=7% Similarity=-0.172 Sum_probs=128.9
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC---CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG---GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
-..+.+++|++.++.++++-...+.|..+++... .....+ +...-.....+++.+.+.+++++-...+.|.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~------~~~~~~~p~glavd~~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE------ECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE------EeCCCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence 4567899999876466666667789999998652 111111 1112234578899876655666666778999
Q ss_pred EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-D-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
+.++........+.........++++|.+..|+.+.. . +.|..+++... ....+....-.....+++++++..|..+
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEE
Confidence 9998754433333334456889999996665555543 3 68888887643 3333322222347899999876555544
Q ss_pred eCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
.. ..+.|..+|++... ...+... ........+++. +..||++-...+.|..++..+++.
T Consensus 182 D~--~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 182 DS--KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp ET--TTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EC--CCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcc
Confidence 32 46789999987533 2333222 122335566664 456667777888999999877763
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=1.9e-05 Score=78.87 Aligned_cols=222 Identities=11% Similarity=0.067 Sum_probs=130.4
Q ss_pred EEEEEeC------CCcEEEEECCCCCcccccccceeeec-----------------------------cc-ccCE-EEEE
Q psy17682 180 VIASGSE------DCVVKVWQIPDGGISRTLTEPVVDLL-----------------------------YH-QRRV-GLVL 222 (490)
Q Consensus 180 ~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~-----------------------------~~-~~~v-~~~~ 222 (490)
.++.++. ++.|..+|.++++.+..+........ .+ ...+ ..++
T Consensus 162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a 241 (571)
T 2ad6_A 162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA 241 (571)
T ss_dssp EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence 4555544 78999999999988765432110000 00 0001 2355
Q ss_pred EeeCCCCEEEEEeCC----------------CcEEEEECCCCeeEEEEecC--C--------CcEEEEEEcCCCC---EE
Q psy17682 223 WHPTAQNVLLTAGSD----------------NNVAIWNVGTGEIMIQIECH--P--------DIVYSASWNWDGS---KL 273 (490)
Q Consensus 223 ~~p~~~~~l~s~~~d----------------g~v~iwd~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~---~l 273 (490)
+.+... +++.+..+ +.|..+|.++++.+..++.. . .++. +....+|+ .+
T Consensus 242 ~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v 319 (571)
T 2ad6_A 242 YDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLL 319 (571)
T ss_dssp EETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEE
T ss_pred EcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEE
Confidence 666654 55555432 35999999999998887632 1 1221 22234674 57
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeeecC------------CCce--------------------------eEEEEeCCCcE
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAVCHE------------GSKA--------------------------TRAIYLKSGLI 315 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~--------------------------~~~~~s~~~~~ 315 (490)
+.++.+|.++++|..+++.+....... +.++ ..++++|+..+
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 399 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT 399 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence 788899999999999999877654221 0101 24578888666
Q ss_pred EEEEeCC----------------------------------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC
Q psy17682 316 FTTGFSK----------------------------------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN 361 (490)
Q Consensus 316 l~~~~~~----------------------------------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 361 (490)
+.+...+ ...+.|..||..+++....... ...+....+...+.
T Consensus 400 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~---~~~~~~~~~~t~gg 476 (571)
T 2ad6_A 400 LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE---KFAAWGGTLYTKGG 476 (571)
T ss_dssp EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTT
T ss_pred EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC---CCCccceeEEECCC
Confidence 6554321 1357899999988764333322 22233333333456
Q ss_pred eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce--eeEEEeeCceeEEe
Q psy17682 362 LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ--RGIGMMPKRGCDVN 411 (490)
Q Consensus 362 ~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i--~~~~~sp~~~~l~~ 411 (490)
.+| .++.|+.|+.+|.++++. +..+.....+ .-+.+..+|+..+.
T Consensus 477 ~v~-~g~~dg~l~a~D~~tG~~----lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 477 LVW-YATLDGYLKALDNKDGKE----LWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEE-EECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEE-EEcCCCeEEEEECCCCCE----EEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 664 478999999999999983 3333332222 22445577765443
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.69 E-value=2.3e-06 Score=74.77 Aligned_cols=189 Identities=8% Similarity=-0.033 Sum_probs=124.3
Q ss_pred EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE--EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy17682 218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV--YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE 295 (490)
Q Consensus 218 v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 295 (490)
...+.|+. + .++.+.+.+|.|+++|+.+++.+..+ -. ... ..+++.. ++..+..-.++.+.+||..+.+.+.+
T Consensus 57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 47888873 3 58888888999999999999988777 22 233 3355542 34444555789999999999999998
Q ss_pred eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC---ceeeeeecCCCCeEEEEecCCCe
Q psy17682 296 AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN---GVMFPLYDPDTNLVYLCGKGDSV 372 (490)
Q Consensus 296 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~g~~dg~ 372 (490)
+..... -..++ +++..|..+. ..+.|.++|..+.+....+....... .++.+.|. +| .|++....+..
T Consensus 132 i~~~~e--GwGLt--~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~ 202 (268)
T 3nok_A 132 TRYSGE--GWGLC--YWNGKLVRSD---GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSD 202 (268)
T ss_dssp EECSSC--CCCEE--EETTEEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSE
T ss_pred EeCCCc--eeEEe--cCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCe
Confidence 874322 22333 5677666664 37799999999876433332212211 24556666 66 56677767889
Q ss_pred EEEEEecCCCCeeEEeeee-----------eCCCceeeEEEeeCc-eeEEeecceeEEEEe
Q psy17682 373 IRYFEITAEPPFVHYINTF-----------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRL 421 (490)
Q Consensus 373 i~iwd~~~~~~~~~~~~~~-----------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~ 421 (490)
|.+.|..+++ ....+..- ....-.++||++|++ ++++++-.--++|.+
T Consensus 203 I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 203 VLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp EEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred EEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 9999999987 22222211 112356999999975 556666555566654
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=2e-05 Score=72.14 Aligned_cols=223 Identities=10% Similarity=-0.031 Sum_probs=132.3
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-C-cEEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-N-NVAIW 243 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g-~v~iw 243 (490)
....+++|++++ +++++-..++.|..||... +....+. ....+.++++.+++. ++++.... + .|..+
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g-~~~~~~~--------~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDG-NQQIHAT--------VEGKVSGLAFTSNGD-LVATGWNADSIPVVSL 100 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTC-CEEEEEE--------CSSEEEEEEECTTSC-EEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCC-ceEEEEe--------CCCCceeEEEcCCCc-EEEEeccCCcceEEEE
Confidence 467789999987 6777766789999998654 3222111 234688999999985 65555432 2 46677
Q ss_pred ECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeeeee--------cCCCceeEEEEeCCC
Q psy17682 244 NVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI-EEEAVC--------HEGSKATRAIYLKSG 313 (490)
Q Consensus 244 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~--------~~~~~~~~~~~s~~~ 313 (490)
|..+++...... ........++..+++..+++-..++.|+.+|..+++. +..... ..-.....+ ++++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 877776543322 1223345566555555555554688999999876431 111000 011123444 7887
Q ss_pred cEEEEEeCCCceeEEEEecCCC-CC--CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682 314 LIFTTGFSKMSERQYSLRAPDH-LD--EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT 390 (490)
Q Consensus 314 ~~l~~~~~~~~~~~i~iwd~~~-~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~ 390 (490)
..|..+.. ..+.|..+++.. +. ....... ......++++++|+++ ++....+.|.+++.. ++ +. .+..
T Consensus 179 ~~lyv~d~--~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~-va~~~~~~V~~~~~~-G~-~~-~~~~ 249 (306)
T 2p4o_A 179 NFLYVSNT--EKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLY-GATHIYNSVVRIAPD-RS-TT-IIAQ 249 (306)
T ss_dssp TEEEEEET--TTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEE-EECBTTCCEEEECTT-CC-EE-EEEC
T ss_pred CEEEEEeC--CCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEE-EEeCCCCeEEEECCC-CC-EE-EEee
Confidence 65555442 467899999874 21 1111211 1345678899999764 666667889999865 44 21 1222
Q ss_pred eeCC-CceeeEEEe---eCceeEE
Q psy17682 391 FQTP-DPQRGIGMM---PKRGCDV 410 (490)
Q Consensus 391 ~~~~-~~i~~~~~s---p~~~~l~ 410 (490)
...+ ...++++|. |++..|.
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEE
T ss_pred cccccCCceEEEEecccCCCCEEE
Confidence 2222 467899998 7854433
No 254
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.68 E-value=9.3e-06 Score=76.85 Aligned_cols=220 Identities=9% Similarity=0.028 Sum_probs=129.0
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP 258 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 258 (490)
..++.++.++.|..+|.++++.......+ ......... .++ .++.++.++.|..+|..+++.+..+....
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-------~~~~~~p~~-~~~--~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVA-------GEALSRPVV-SDG--LVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECS-------SCCCSCCEE-ETT--EEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCC-------CceEcCCEE-ECC--EEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 57888889999999999999876544321 111111111 133 67888889999999999999888776432
Q ss_pred CcE-----EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCC----------ceeEEEEeCCCcEEEEEeCCC
Q psy17682 259 DIV-----YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS----------KATRAIYLKSGLIFTTGFSKM 323 (490)
Q Consensus 259 ~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~s~~~~~l~~~~~~~ 323 (490)
... ...... +..+++++.++.+..+|..+++.+......... ....... .++. +..++
T Consensus 174 ~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~-v~~~~--- 246 (376)
T 3q7m_A 174 PSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGV-VFALA--- 246 (376)
T ss_dssp -----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTE-EEEEC---
T ss_pred CceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCE-EEEEe---
Confidence 111 112222 456788888999999999999988776532110 0011111 1344 44444
Q ss_pred ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682 324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM 403 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s 403 (490)
.++.+..+|..+++.... .. ......+.. ++..++ .++.++.+..+|..+++...+ .... ....+......
T Consensus 247 ~~g~l~~~d~~tG~~~w~---~~-~~~~~~~~~--~~~~l~-~~~~~g~l~~~d~~tG~~~w~-~~~~-~~~~~~~~~~~ 317 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWK---RE-LGSVNDFIV--DGNRIY-LVDQNDRVMALTIDGGVTLWT-QSDL-LHRLLTSPVLY 317 (376)
T ss_dssp TTSCEEEEETTTCCEEEE---EC-CCCEEEEEE--ETTEEE-EEETTCCEEEEETTTCCEEEE-ECTT-TTSCCCCCEEE
T ss_pred cCcEEEEEECCCCcEEee---cc-CCCCCCceE--ECCEEE-EEcCCCeEEEEECCCCcEEEe-eccc-CCCcccCCEEE
Confidence 477899999987763222 12 122334443 355664 456788999999999873221 1101 11223333333
Q ss_pred eCceeEEee-cceeEEEEecCCC
Q psy17682 404 PKRGCDVNS-CEIGRFFRLNNSG 425 (490)
Q Consensus 404 p~~~~l~~~-~~~~~~~~~~~~~ 425 (490)
++.+.+.. .+.+..++..+++
T Consensus 318 -~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 318 -NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp -TTEEEEECTTSEEEEEETTTCC
T ss_pred -CCEEEEEeCCCeEEEEECCCCc
Confidence 34443333 4467777777776
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.65 E-value=7.1e-05 Score=65.72 Aligned_cols=208 Identities=10% Similarity=0.081 Sum_probs=135.8
Q ss_pred ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy17682 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT 289 (490)
Q Consensus 211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 289 (490)
+.+-...+..++|+|++..++++...++.|...|.. ++.+..+. ........+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 445556799999999876566678888999999997 88887775 2235688899998887767666778899998876
Q ss_pred Ccee---eeee-----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec------cCCCceeeee
Q psy17682 290 GAIE---EEAV-----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL------DTSNGVMFPL 355 (490)
Q Consensus 290 ~~~~---~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~------~~~~~i~~~~ 355 (490)
...+ .... ...+.-.-.++|+|.+..|.++.+.. ...|..|+-............ ........++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5422 2221 11122368999999986666555321 235566651111111222111 1233578899
Q ss_pred ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-------CCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682 356 YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-------PDPQRGIGMMPKRGCDVNSCEIGRFFRLNN 423 (490)
Q Consensus 356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~ 423 (490)
++|....+++....+..+.++|.... +...+..... ....-+|+|.++|.+.+++..+ .+|++..
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN-RFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT-EEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc-eEEEEEe
Confidence 99998888888888899999997643 2222222111 1245899999999877775444 7887754
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.63 E-value=1.4e-05 Score=82.81 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=114.3
Q ss_pred CeeEEEEC-CCCCCEEEEEeCCC----cEEEEECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---
Q psy17682 167 PVLDIAWS-PHDDNVIASGSEDC----VVKVWQIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--- 237 (490)
Q Consensus 167 ~V~~~~~~-p~~~~~l~s~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--- 237 (490)
.+...+|| |||..++++...+| +|+++|+.++ +.+.. . +. .....++|+|+++.++++ ..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~---~~---~~~~~~~WspDg~~l~y~-~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---K---VS---GTNGEIVWGPDHTSLFYV-TKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---C---EE---EECSCCEECSSTTEEEEE-EECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---c---cc---CceeeEEEecCCCEEEEE-EECCCC
Confidence 67889999 99943444444443 4999999888 53211 1 11 113468899999744444 443
Q ss_pred --CcEEEEECCCCee--EEEEe-cCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCc-ee--eeeeecCCCceeE
Q psy17682 238 --NNVAIWNVGTGEI--MIQIE-CHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGA-IE--EEAVCHEGSKATR 306 (490)
Q Consensus 238 --g~v~iwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~~~~~~~~~~~ 306 (490)
..|.++++.+++. ...+. ........+.|+|||++|+..+. ...|+++|+.++. .. ..+..........
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 3588888877642 23333 22344678899999998887663 3468999998763 22 3332222223455
Q ss_pred EEEeCCCcEEEEEeCC-CceeEEEEecCCCCCCCeE-EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682 307 AIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDEPIV-MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI 378 (490)
Q Consensus 307 ~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~ 378 (490)
+.|+..+.+++....+ .....|..+++.+...... +. .+...+..-.+++.++.|+++...++..++|-+
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li--~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV--DHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE--CCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE--CCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence 5555445454444322 2345777888764222111 22 222222222344456778788888886555543
No 257
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.63 E-value=0.00014 Score=69.23 Aligned_cols=231 Identities=6% Similarity=-0.163 Sum_probs=141.4
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ 215 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (490)
...|+..++... ....+...-..+..++|++.++.++++-...+.|+.+++....... ..........
T Consensus 91 ~~~I~~i~l~~~---------~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~---~~~~~~~~~~ 158 (400)
T 3p5b_L 91 RHEVRKMTLDRS---------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDI 158 (400)
T ss_dssp TTEEEEECTTSC---------SCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C---CCEEEECSSC
T ss_pred cceeEEEccCCc---------ceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC---cceEEEeCCC
Confidence 467788877511 1122333456788999998764666666667889999876532100 0011122233
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCcee
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK--DKKMRIINPRTGAIE 293 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~ 293 (490)
.....+++.+.+.+++++-...+.|.+.+++.......+.........+++.|.+..|+.... .+.|...++.....
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~- 237 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI- 237 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-
Confidence 467889999865556677667789999998765544444434556889999996665555542 36799888875433
Q ss_pred eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCe
Q psy17682 294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSV 372 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~ 372 (490)
..+....-.....+++++++..|..+.. ..+.|...|++.... ..+... ........+++ ++..||.+-...+.
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAV--FEDKVFWTDIINEA 312 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEE--ETTEEEEEESSSCS
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCe
Confidence 2332222234889999987665555532 467899999875433 233221 12233455655 45567777777888
Q ss_pred EEEEEecCCCCe
Q psy17682 373 IRYFEITAEPPF 384 (490)
Q Consensus 373 i~iwd~~~~~~~ 384 (490)
|..++..+++..
T Consensus 313 V~~~~~~~G~~~ 324 (400)
T 3p5b_L 313 IFSANRLTGSDV 324 (400)
T ss_dssp EEEEESSSCCCC
T ss_pred EEEEEcCCCCce
Confidence 999997777633
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.63 E-value=0.00018 Score=66.14 Aligned_cols=227 Identities=9% Similarity=0.017 Sum_probs=135.5
Q ss_pred CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEEE
Q psy17682 188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVYS 263 (490)
Q Consensus 188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~ 263 (490)
..|+..++...+....+. ....+..++|++.+..++++-..++.|..+++.. ......+.........
T Consensus 10 ~~I~~i~~~~~~~~~~~~--------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceEehhc--------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 568999987765433221 3456789999987654666666678999999875 2222223222345678
Q ss_pred EEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682 264 ASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIV 341 (490)
Q Consensus 264 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~ 341 (490)
+++.+.+. ++++-...+.|.++|+..... ..+..........++++|. +.++++.. +..+.|...+++... ...
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~--~~~~~I~~~~~dG~~-~~~ 157 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVD-IYS 157 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCC-EEE
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEcc--CCCCeEEEEcCCCCC-eEE
Confidence 99987554 555556778999999875443 3332222234889999986 44555443 123678888876432 112
Q ss_pred EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682 342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGMMPKRGCDVNSCEIGRFFR 420 (490)
Q Consensus 342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~~~~ 420 (490)
+.. ........+++++++..||++-+..+.|..+|+.... . +.+... .......++++.. +.+.++.....+++.
T Consensus 158 ~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~-~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 158 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-R-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 233 (316)
T ss_dssp EEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-e-EEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEE
Confidence 211 2234577899999999998888888899999987543 2 222211 1123456788854 555555544445554
Q ss_pred ec--CCCceEEE
Q psy17682 421 LN--NSGLCQVV 430 (490)
Q Consensus 421 ~~--~~~~~~~i 430 (490)
+. +++.++.+
T Consensus 234 ~~~~~g~~~~~i 245 (316)
T 1ijq_A 234 ANRLTGSDVNLL 245 (316)
T ss_dssp EETTTCCCCEEE
T ss_pred EeCCCCcceEEE
Confidence 43 45434443
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=0.00014 Score=75.91 Aligned_cols=341 Identities=9% Similarity=-0.020 Sum_probs=185.5
Q ss_pred cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682 44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV 123 (490)
Q Consensus 44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 123 (490)
...|.++...+++ .+.+ |...+-|.+++..++.+....... + ....... .........|.++...++.
T Consensus 257 ~~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~----f----~~~~~~~-~~~~l~~~~v~~i~~D~~g- 324 (781)
T 3v9f_A 257 SSYIFSIKQLKDN-KLWI-ATELNGIMILDLQQNQFLLPEQIR----F----EFIREGD-NNYSLSNASARYIFQDSFN- 324 (781)
T ss_dssp CCCEEEEEECTTS-EEEE-EESSSCEEEEETTCC-------------C----EEECBCS-STTSBSSSCEEEEEECSSC-
T ss_pred CceEEEEEECCCC-CEEE-EeCCCCeEEECCCCCeeeeeeccc----c----ccccCCC-CCCCCCCCeEEEEEEeCCC-
Confidence 3568888888777 5544 344345677888765432110000 0 0000000 0011122345666665553
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCC-cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINAD-HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR 202 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 202 (490)
.++.+..++.|..++.....-..-..... ...-......|.++...++| .|..|+.++-|..|+..++....
T Consensus 325 -----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~ 397 (781)
T 3v9f_A 325 -----NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIY 397 (781)
T ss_dssp -----CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEEC
T ss_pred -----CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEE
Confidence 46667766777777654110000000000 00001123579999998876 35566666678899976543211
Q ss_pred ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682 203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSASWNWDGSKLLTTCKD 279 (490)
Q Consensus 203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d 279 (490)
+..+ .......|.++...+++. |..|+.++-|..+|..+++.. .+. .....|.++...++++ |..|+.
T Consensus 398 -~~~~---~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~-lwigt~- 468 (781)
T 3v9f_A 398 -NKEN---RELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK-IWIGTH- 468 (781)
T ss_dssp -C--------CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE-EEEEET-
T ss_pred -ccCC---CCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC-EEEEEC-
Confidence 1110 012346789998887774 555777677899998776543 332 1346789998888776 444555
Q ss_pred CeEEEEeCCCCceeeeeeec----CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc---CCCcee
Q psy17682 280 KKMRIINPRTGAIEEEAVCH----EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD---TSNGVM 352 (490)
Q Consensus 280 g~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~---~~~~i~ 352 (490)
+-|..||..+++........ ....+.++...++|.+.+... .+-+..+|..+.. ....... ....|.
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----~~Gl~~~~~~~~~--~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF----GGGVGIYTPDMQL--VRKFNQYEGFCSNTIN 542 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES----SSCEEEECTTCCE--EEEECTTTTCSCSCEE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc----CCCEEEEeCCCCe--EEEccCCCCCCCCeeE
Confidence 56899998876543322211 123488888888898776543 2346778876532 1111111 124578
Q ss_pred eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682 353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRLN 422 (490)
Q Consensus 353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~ 422 (490)
++..+++|+.. ++. .+|.|..||..+++ +. ...... ....|.++...++|.+-+++..-+..++..
T Consensus 543 ~i~~d~~g~lW-i~T-~~Glv~~~d~~~~~-~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~ 610 (781)
T 3v9f_A 543 QIYRSSKGQMW-LAT-GEGLVCFPSARNFD-YQ-VFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITS 610 (781)
T ss_dssp EEEECTTSCEE-EEE-TTEEEEESCTTTCC-CE-EECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETT
T ss_pred EEEECCCCCEE-EEE-CCCceEEECCCCCc-EE-EccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECC
Confidence 88888999876 433 36665888887765 22 222111 124578888888888777665444444443
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=0.00029 Score=73.53 Aligned_cols=329 Identities=10% Similarity=-0.024 Sum_probs=178.2
Q ss_pred ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682 45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK 124 (490)
Q Consensus 45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 124 (490)
..|.++...+++ .+.+.. .+ -+.++|..++.+.... .. ...........|.++...++.
T Consensus 211 ~~i~~i~~d~~g-~lwigt-~~-Gl~~~d~~~~~~~~~~---------------~~-~~~~~~l~~~~i~~i~~d~~g-- 269 (781)
T 3v9f_A 211 NDVRCIYKDTNG-NIWIGT-SK-GLALFNANTETFTNFH---------------NN-PGNIHGALSSYIFSIKQLKDN-- 269 (781)
T ss_dssp SSEEEEEECTTC-CEEEEE-TT-EEEEEETTTTEEEC---------------------------CCCCEEEEEECTTS--
T ss_pred CceeEEEEcCCC-CEEEEe-CC-cHheECCCCCcEEEEE---------------cC-CCccccccCceEEEEEECCCC--
Confidence 457888877777 555533 33 5778887664321100 00 000000112245666665553
Q ss_pred ceEEEEEeeCCCceEEEECCCCCCCCcccCC------CCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682 125 EFKEEIRKLKSQQALSILPPPSTAPNTGRIN------ADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198 (490)
Q Consensus 125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 198 (490)
.++.+...+.+.+++........-... .....-.-....|.++...++| .|..|+.++-|..++..+.
T Consensus 270 ----~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~ 343 (781)
T 3v9f_A 270 ----KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWGGGINFISNAPP 343 (781)
T ss_dssp ----EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBSSCEEEECSSCC
T ss_pred ----CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecCCeEEEeCCCCC
Confidence 455566545667776542110000000 0000001234679999999877 3666776777889987655
Q ss_pred Ccccccccce--eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEcCCCCEE
Q psy17682 199 GISRTLTEPV--VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWNWDGSKL 273 (490)
Q Consensus 199 ~~~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l 273 (490)
........+. .........|.++...+++. |..|+.++-|..||..+++..... ......|.++...+++.+
T Consensus 344 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l- 420 (781)
T 3v9f_A 344 TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL- 420 (781)
T ss_dssp SCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-
T ss_pred cceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-
Confidence 4322100000 00011335689998888774 566666666889998654322111 123467899988877764
Q ss_pred EEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc----CC
Q psy17682 274 LTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD----TS 348 (490)
Q Consensus 274 ~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~----~~ 348 (490)
..|+.++.|..+|..+++...... ......+.++...++|.+.+.. . +.+..+|..+..... ..... ..
T Consensus 421 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt----~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~ 494 (781)
T 3v9f_A 421 WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT----H-AGVFVIDLASKKVIH-HYDTSNSQLLE 494 (781)
T ss_dssp EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE----T-TEEEEEESSSSSCCE-EECTTTSSCSC
T ss_pred EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE----C-CceEEEeCCCCeEEe-cccCccccccc
Confidence 457776789999987765432211 1122348888888888766543 2 457888877644322 22111 13
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeec
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~ 413 (490)
..|.++...++|+.. + |+.++-+..||..+++ +. ...... ....|.++...++|.+.+++.
T Consensus 495 ~~i~~i~~d~~g~lW-i-gt~~~Gl~~~~~~~~~-~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFW-I-GTFGGGVGIYTPDMQL-VR-KFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp SCEEEEEECTTCCEE-E-EESSSCEEEECTTCCE-EE-EECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred ceeEEEEEcCCCCEE-E-EEcCCCEEEEeCCCCe-EE-EccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 458888899999876 3 3333447778876553 21 111100 124578888888887666554
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.57 E-value=6.2e-06 Score=84.31 Aligned_cols=235 Identities=11% Similarity=0.035 Sum_probs=126.9
Q ss_pred CeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe-CC-----Cc
Q psy17682 167 PVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SD-----NN 239 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-----g~ 239 (490)
...++++.+++ .+++.|+ .+..+.+||..+++-...-. +. ....-.+++..++++ +++.|+ .+ ..
T Consensus 244 ~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~~-----~~-~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 244 FCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPD-----MQ-VARGYQSSATMSDGR-VFTIGGSWSGGVFEKN 315 (656)
T ss_dssp SSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCC-----CS-SCCSSCEEEECTTSC-EEEECCCCCSSSCCCC
T ss_pred ccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECCC-----CC-ccccccceEEecCCe-EEEEeCcccCCccccc
Confidence 34456777777 7888887 45689999987654322111 11 111113455566775 888888 34 56
Q ss_pred EEEEECCCCeeEEEEec-----CCCcEEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCCceeeeeeecCC----
Q psy17682 240 VAIWNVGTGEIMIQIEC-----HPDIVYSASWNWDGSKLLTTCKD---------KKMRIINPRTGAIEEEAVCHEG---- 301 (490)
Q Consensus 240 v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~---- 301 (490)
+.+||..+.+-.. +.. ....-....+..++..++.++.+ ..+..||..+............
T Consensus 316 ~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 316 GEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV 394 (656)
T ss_dssp EEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEE
T ss_pred ceEeCCCCCccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccccc
Confidence 8999998765332 210 00000001223455555666544 3567888887764433221111
Q ss_pred ----CceeEEEEe-CCCcEEEEEeCCCc--------eeEEEEecCCCCCCCeEEE--eccCCCceeeeeecCCCCeEEEE
Q psy17682 302 ----SKATRAIYL-KSGLIFTTGFSKMS--------ERQYSLRAPDHLDEPIVMV--ELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 302 ----~~~~~~~~s-~~~~~l~~~~~~~~--------~~~i~iwd~~~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
..-..+.+. .++++++.|+.... ...+.+||..+..-. ... .......-..++..|+++.+ +.
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~~mp~~R~~~~~~~l~~g~i~-v~ 472 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT-VFASNGLYFARTFHTSVVLPDGSTF-IT 472 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE-EECTTCCSSCCBSCEEEECTTSCEE-EE
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee-EEccCCCCCCcccCCeEECCCCCEE-EE
Confidence 012334444 47888888863211 116888888764321 111 11222223344567888877 56
Q ss_pred ecCC-----------CeEEEEEecCCCCeeEEeeeeeCCCc-eeeEEEeeCceeEEeecc
Q psy17682 367 GKGD-----------SVIRYFEITAEPPFVHYINTFQTPDP-QRGIGMMPKRGCDVNSCE 414 (490)
Q Consensus 367 g~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~~ 414 (490)
|+.+ ..+.+||..+.+ ...+........ .....+.|++++++.|+.
T Consensus 473 GG~~~~~~~~~~~~~~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 473 GGQRRGIPFEDSTPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCBSBCCTTCCCSBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccCcCcCCCCcccceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 6543 468999998764 222322222212 233456789999888875
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.57 E-value=0.00021 Score=66.64 Aligned_cols=246 Identities=9% Similarity=-0.022 Sum_probs=145.6
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
.+...|.+..++. +|+.+ ....|+..++........ ......+..++|++.+..++++-...+.|..++
T Consensus 33 ~d~~~C~~~~~~~--~ll~~-~~~~I~~i~~~g~~~~~~--------~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~ 101 (349)
T 3v64_C 33 PDRRSCKALGPEP--VLLFA-NRIDIRQVLPHRSEYTLL--------LNNLENAIALDFHHRRELVFWSDVTLDRILRAN 101 (349)
T ss_dssp TTSSCEEESSSCC--EEEEE-CBSCEEEECTTSCCEEEE--------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCcccccccCc--eeEee-cccceEEEeCCCCeeEEe--------ecCCCceEEEEEeccccEEEEEeccCCceEEEe
Confidence 3445566666633 44433 344688888755433221 113345789999987654555655678899999
Q ss_pred CCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCC
Q psy17682 245 VGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSK 322 (490)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~ 322 (490)
+........+.........+++.+.+ +++++-...+.|.+.++..... ..+..........++++|.+ .++.+-.
T Consensus 102 ~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~-- 178 (349)
T 3v64_C 102 LNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDW-- 178 (349)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEEC--
T ss_pred cCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEecc--
Confidence 87655433333233456789998755 4555555678999999875443 22322222347899999864 4444443
Q ss_pred CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM 402 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 402 (490)
+..+.|...+++.... ..+. .........++++|++..||++-...+.|..+++..... ...+. .......++++
T Consensus 179 ~~~~~I~r~~~dG~~~-~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~--~~~~~P~giav 253 (349)
T 3v64_C 179 GNTPRIEASSMDGSGR-RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV 253 (349)
T ss_dssp SSSCEEEEEETTSCSC-EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC--SSCSSEEEEEE
T ss_pred CCCCEEEEEeCCCCCc-EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEe--CCCCCceEEEE
Confidence 1227788888775332 1111 122334688999999999988887888999999875431 11121 11234577888
Q ss_pred eeCceeEEeecceeEEEEec--CCCceEEE
Q psy17682 403 MPKRGCDVNSCEIGRFFRLN--NSGLCQVV 430 (490)
Q Consensus 403 sp~~~~l~~~~~~~~~~~~~--~~~~~~~i 430 (490)
..+.+.++.....+++.+. +++....+
T Consensus 254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 254 -FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred -ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 4455556654444555554 44433433
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.56 E-value=0.00021 Score=66.58 Aligned_cols=205 Identities=5% Similarity=-0.098 Sum_probs=129.2
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
-..+..++|++.++.++++-...+.|..+++........+. ........+++.+.+.+++++-...+.|.+.+
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 34578999998764666666677899999987654322111 12234578899886655666666678999999
Q ss_pred CCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682 245 VGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 322 (490)
+........+.........++++|.+..|+ +-... +.|..+++..... ..+....-.....++++|++..|..+..
T Consensus 145 ~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~- 222 (349)
T 3v64_C 145 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDA- 222 (349)
T ss_dssp TTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEET-
T ss_pred CCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEEC-
Confidence 875443333333445678999999655544 44444 7899888774432 2222222234789999987555544432
Q ss_pred CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
..+.|..+|+..... ..+.. ........+++ ++..||++-...+.|..++..+++.
T Consensus 223 -~~~~I~~~~~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 223 -KHHVIERANLDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp -TTTEEEEEETTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred -CCCEEEEEeCCCCce-EEEEe-CCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCc
Confidence 467899999875332 22222 12234566666 3456667777788888888666653
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=0.00015 Score=68.78 Aligned_cols=205 Identities=5% Similarity=-0.110 Sum_probs=129.4
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
...+..++|++.++.++++-...+.|..+++........+. ........+++.+.+.+++++-...+.|.+.+
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-------SSCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 45688999998665666676677899999987554322111 12234567888886655666666678899988
Q ss_pred CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682 245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK 322 (490)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 322 (490)
+........+.........+++.|.+..|+.+. .. +.|..+++..... ..+....-.....++++|++..|..+..
T Consensus 188 ~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~- 265 (386)
T 3v65_B 188 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDA- 265 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEEGGGTEEEEEET-
T ss_pred CCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCeeeEEEeCCCCEEEEEEC-
Confidence 865443333333446688999999666555544 44 6788888875433 2332222223789999987555544432
Q ss_pred CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
..+.|..+|+.... ...+.. ........+++ ++..||++-...+.|..++..+++.
T Consensus 266 -~~~~I~~~d~dG~~-~~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 266 -KHHVIERANLDGSH-RKAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp -TTTEEEEECTTSCS-CEEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred -CCCEEEEEeCCCCe-eEEEEE-CCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 46789999987533 222222 22334566777 3446667777888899888666663
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=0.00022 Score=71.34 Aligned_cols=162 Identities=14% Similarity=0.113 Sum_probs=99.1
Q ss_pred CcEEEEECCCCeeEEEEec--CC--------CcEEEEEEc-CCCC---EEEEEeCCCeEEEEeCCCCceeeeeeecC---
Q psy17682 238 NNVAIWNVGTGEIMIQIEC--HP--------DIVYSASWN-WDGS---KLLTTCKDKKMRIINPRTGAIEEEAVCHE--- 300 (490)
Q Consensus 238 g~v~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--- 300 (490)
+.|.-+|.++|+.+..++. |. .++. +... .+|+ .++.++.+|.++++|..+++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999988863 21 1221 2222 4674 78889999999999999999876654321
Q ss_pred ---------CCc--------------------------------eeEEEEeCCCcEEEEEeC------------------
Q psy17682 301 ---------GSK--------------------------------ATRAIYLKSGLIFTTGFS------------------ 321 (490)
Q Consensus 301 ---------~~~--------------------------------~~~~~~s~~~~~l~~~~~------------------ 321 (490)
+.+ ...++++|+..++.+...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 013456666444433221
Q ss_pred ------------CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee
Q psy17682 322 ------------KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389 (490)
Q Consensus 322 ------------~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~ 389 (490)
....+.|.-||+.+++..-.... ...+..-.....+..+ +.|+.|+.++.||.++++ .+.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglv-f~g~~dg~l~A~D~~tG~----~lW 521 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGK----ELW 521 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCC----EEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecC---CCCCcccceEeCCCEE-EEECCCCcEEEEECCCCC----EEE
Confidence 01257899999998764333322 1222222222346666 458899999999999998 344
Q ss_pred eeeCCCcee--eEEEeeCcee
Q psy17682 390 TFQTPDPQR--GIGMMPKRGC 408 (490)
Q Consensus 390 ~~~~~~~i~--~~~~sp~~~~ 408 (490)
.+..+..+. -+.+..+|+.
T Consensus 522 ~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 522 KFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp EEECSSCCCSCCEEEEETTEE
T ss_pred EecCCCCcccCceEEEECCEE
Confidence 444333333 3677788864
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.55 E-value=2.7e-05 Score=67.43 Aligned_cols=194 Identities=11% Similarity=0.013 Sum_probs=122.7
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDI-VYSASWNWDGSKLLTTCKDKKMRIINPRTGAI 292 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 292 (490)
.....+.|++ + .++.+.+.+| .|+.+|+.+++.+.++...... -..++.. .++.++..-.++.+.+||..+.+.
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE
Confidence 3467899986 4 4777777754 8999999999998888632221 1234443 234444445789999999999999
Q ss_pred eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEEEecC
Q psy17682 293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYLCGKG 369 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~g~~ 369 (490)
+.++..... -..+ .+++..|..+. ..+.|.++|..+.+....+....+. ..++.+.+. +|+ |++....
T Consensus 98 ~~ti~~~~~--Gwgl--t~dg~~L~vSd---gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~ 168 (243)
T 3mbr_X 98 RARFRYPGE--GWAL--TSDDSHLYMSD---GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWL 168 (243)
T ss_dssp EEEEECSSC--CCEE--EECSSCEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT
T ss_pred EEEEeCCCC--ceEE--eeCCCEEEEEC---CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECC
Confidence 998874332 2333 35666555554 3678999999987643333221221 234455554 554 6566666
Q ss_pred CCeEEEEEecCCCCeeEEeeee-----------eCCCceeeEEEeeCc-eeEEeecceeEEEEec
Q psy17682 370 DSVIRYFEITAEPPFVHYINTF-----------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRLN 422 (490)
Q Consensus 370 dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~~ 422 (490)
+..|.+.|..+++ ....+..- ....-.+++|++|++ ++++++-.--++|.+.
T Consensus 169 s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 169 TSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp TTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 7799999999987 22222211 111346899999975 5566665555666543
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.52 E-value=4.5e-05 Score=69.87 Aligned_cols=199 Identities=8% Similarity=-0.013 Sum_probs=121.1
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCcee
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--KKMRIINPRTGAIE 293 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~ 293 (490)
....+++|++++. ++++-..++.|..||... +....+. .......+++.++|+++++.... ..|..+|..+++..
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 4567899999885 777766789999999865 3333333 34578899999999976665433 24777887777654
Q ss_pred eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe--------ccCCCceeeeeecCCCCeEEE
Q psy17682 294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE--------LDTSNGVMFPLYDPDTNLVYL 365 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~ 365 (490)
.............++..+++..+++.. ..+.|.++|............ .........+ +|+++.||+
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEeCCCccccCcccccCCCcEEEEEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 332222222244555556666555543 356788888764311010000 0111123444 889999988
Q ss_pred EecCCCeEEEEEecC-CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682 366 CGKGDSVIRYFEITA-EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS 424 (490)
Q Consensus 366 ~g~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~ 424 (490)
+-...+.|..|++.. ++ + .....+.......+++++++|.+.++.....++..++..
T Consensus 184 ~d~~~~~I~~~~~~~~g~-~-~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDK-P-GEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EETTTTEEEEEEBCTTSC-B-CCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EeCCCCEEEEEEeCCCCC-C-CccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 888889999999975 32 1 111111111356789999999887776444455555443
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.51 E-value=7.5e-05 Score=68.88 Aligned_cols=199 Identities=12% Similarity=0.077 Sum_probs=125.8
Q ss_pred CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--------------------CCCcEEEEEEcC-CCCEEEE
Q psy17682 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--------------------HPDIVYSASWNW-DGSKLLT 275 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~ 275 (490)
...+++|.+++. +++++..++.|..|+..+++.. .+.. ....+..+++.+ +++ |++
T Consensus 20 ~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCTTCS-SEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcCCCC-EEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 456788999874 6778888899999998765432 2221 013578999998 554 555
Q ss_pred EeCCCeEEEEeCCCCceeeeee----ecCCCceeEEEEeC-CCcEEEEEeCC--------------CceeEEEEecCCCC
Q psy17682 276 TCKDKKMRIINPRTGAIEEEAV----CHEGSKATRAIYLK-SGLIFTTGFSK--------------MSERQYSLRAPDHL 336 (490)
Q Consensus 276 ~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~s~-~~~~l~~~~~~--------------~~~~~i~iwd~~~~ 336 (490)
+...+.|..+|..+++. ..+. +........+++.+ +|++.++-... ...+.|..+|..+.
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55556688999775532 2221 11112367899999 99877765320 12477888887654
Q ss_pred CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC-eeEEeeeeeCCCceeeEEEeeCceeEEeecc-
Q psy17682 337 DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP-FVHYINTFQTPDPQRGIGMMPKRGCDVNSCE- 414 (490)
Q Consensus 337 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~- 414 (490)
........ ......++++|+|+.|+++-...+.|.+|++..... ..+.+.. ... ..++++.++|.+.++...
T Consensus 176 ~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 176 ETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp EEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEE
T ss_pred EEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCc
Confidence 32111111 123467899999998877777788999999875321 1112221 122 788999999987666543
Q ss_pred ---------eeEEEEecCCC
Q psy17682 415 ---------IGRFFRLNNSG 425 (490)
Q Consensus 415 ---------~~~~~~~~~~~ 425 (490)
..+++.++...
T Consensus 250 ~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp TTSSTTSCEEEEEEEECTTS
T ss_pred ccccccCCCccEEEEECCCC
Confidence 45677776544
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.51 E-value=0.00031 Score=66.48 Aligned_cols=244 Identities=8% Similarity=-0.050 Sum_probs=144.4
Q ss_pred eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682 168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT 247 (490)
Q Consensus 168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~ 247 (490)
-.|.+..+. .+|+.+. ...|+..++......... .....+..++|++.+..++++-...+.|..+++..
T Consensus 79 ~~C~~~~~~--~~l~~~~-~~~I~~i~~~~~~~~~~~--------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g 147 (386)
T 3v65_B 79 RSCKALGPE--PVLLFAN-RIDIRQVLPHRSEYTLLL--------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNG 147 (386)
T ss_dssp SCEEECSSC--CEEEEEC-BSCEEEECTTSCCCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CeECCcccc--ceeEeec-CccceeeccCCCcEEEEe--------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 345555552 3444333 457888887655432221 13345789999987654666656678899999876
Q ss_pred CeeEEEEecCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682 248 GEIMIQIECHPDIVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER 326 (490)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 326 (490)
......+.........+++.+.+. ++++-...+.|.+.++...... .+..........++++|.+..|..... +..+
T Consensus 148 ~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~l~~P~giavdp~~g~ly~td~-~~~~ 225 (386)
T 3v65_B 148 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-VLLWQSLEKPRAIALHPMEGTIYWTDW-GNTP 225 (386)
T ss_dssp CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-EEECSSCSCEEEEEEETTTTEEEEEEC-SSSC
T ss_pred CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-EeecCCCCCCcEEEEEcCCCeEEEecc-CCCC
Confidence 654333333334456788987554 5555556788999988754432 232222234789999987554443331 1237
Q ss_pred EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682 327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR 406 (490)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~ 406 (490)
.|...+++.... ..+.. ........++++|++..||++-+..+.|..+++..... ...+. .......++++ ..+
T Consensus 226 ~I~r~~~dG~~~-~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~--~~~~~P~giav-~~~ 299 (386)
T 3v65_B 226 RIEASSMDGSGR-RIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV-FED 299 (386)
T ss_dssp EEEEEETTSCSC-EEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEEC--SSCSSEEEEEE-ETT
T ss_pred EEEEEeCCCCCc-EEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEE--CCCCCceEEEE-ECC
Confidence 788888875332 22221 22344688999999988888888888999999875431 11221 11234578888 444
Q ss_pred eeEEeecceeEEEEec--CCCceEEE
Q psy17682 407 GCDVNSCEIGRFFRLN--NSGLCQVV 430 (490)
Q Consensus 407 ~~l~~~~~~~~~~~~~--~~~~~~~i 430 (490)
.+.++.-...+++.+. +++..+.+
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEeeCCCCeEEEEECCCCcceEEE
Confidence 5555554444555543 44434444
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.48 E-value=9.8e-05 Score=64.84 Aligned_cols=202 Identities=9% Similarity=0.116 Sum_probs=126.3
Q ss_pred eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV 240 (490)
Q Consensus 161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v 240 (490)
+.+-.+.+..++|+|+++.++++...++.|...|.. ++.++.+. +.+ ......+++.+++. ++++.-.++.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-----l~g-~~D~EGIa~~~~g~-~~vs~E~~~~l 93 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-----LDF-VKDLETIEYIGDNQ-FVISDERDYAI 93 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-----CSS-CSSEEEEEECSTTE-EEEEETTTTEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-----cCC-CCChHHeEEeCCCE-EEEEECCCCcE
Confidence 335556899999999875677778888999999987 77666543 222 24578889988874 55665567889
Q ss_pred EEEECCCCee---EEEEe------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCceeeeeee------cCCC
Q psy17682 241 AIWNVGTGEI---MIQIE------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR---TGAIEEEAVC------HEGS 302 (490)
Q Consensus 241 ~iwd~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~------~~~~ 302 (490)
.++++..... +.... ........++|+|.++.|+++.......+|.+. ....+..... ..-.
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 9998765432 22222 123446899999998777777655444444443 1111222211 0112
Q ss_pred ceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC--------CceeeeeecCCCCeEEEEecCCCeE
Q psy17682 303 KATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS--------NGVMFPLYDPDTNLVYLCGKGDSVI 373 (490)
Q Consensus 303 ~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~g~~dg~i 373 (490)
.+..++++|. +++++.+. ..+.+.++|.... +.....+... ...-.++|.++|+ ||++ +..+.+
T Consensus 174 d~S~l~~dp~tg~lliLS~---~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~ 246 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSH---ESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRF 246 (255)
T ss_dssp CCCEEEEETTTTEEEEEET---TTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEE
T ss_pred CceeEEEcCCCCeEEEEEC---CCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceE
Confidence 3789999998 55555554 5678888887743 3333333321 2357889999997 4455 455666
Q ss_pred EEEE
Q psy17682 374 RYFE 377 (490)
Q Consensus 374 ~iwd 377 (490)
+.|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.47 E-value=2.4e-05 Score=79.82 Aligned_cols=235 Identities=10% Similarity=0.043 Sum_probs=144.1
Q ss_pred CEEEEEeCCCcEEEEECCCCCccccccccee--eecccccCEEEEEEeeCCCCEEEEEeC------CCcEEEEECCCCee
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVV--DLLYHQRRVGLVLWHPTAQNVLLTAGS------DNNVAIWNVGTGEI 250 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~s~~~------dg~v~iwd~~~~~~ 250 (490)
..++.++.|+.|..+|..+|+.+........ .......++ . .++ .++++.. +|.|..+|.++|+.
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v-~~~--~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----V-VKG--KVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----E-ETT--EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----E-ECC--EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 4778888899999999999988765432100 000011111 1 133 4555432 58999999999999
Q ss_pred EEEEecCC---C----------------------------cEEEEEEcCCCCEEEEEeCCC-------------------
Q psy17682 251 MIQIECHP---D----------------------------IVYSASWNWDGSKLLTTCKDK------------------- 280 (490)
Q Consensus 251 ~~~~~~~~---~----------------------------~v~~~~~~~~~~~l~~~~~dg------------------- 280 (490)
+.++.... . ....+++.|+...++.++.++
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 98875211 0 012468888888888888766
Q ss_pred eEEEEeCCCCceeeeeeec--CC------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc---
Q psy17682 281 KMRIINPRTGAIEEEAVCH--EG------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD--- 346 (490)
Q Consensus 281 ~i~iwd~~~~~~~~~~~~~--~~------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~--- 346 (490)
.|..+|.++++.+..+... .. .+.....+..+|+ .++.++ .++.++++|..+++.........
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l~~~~~~~~~w 347 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP---KNGFFYVLDRTNGKLISAEKFGKVTW 347 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC---TTSEEEEEETTTCCEEEEEESSCCCS
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEEC---CCCEEEEEECCCCCEecccccccccc
Confidence 4999999999998887632 10 1223333334665 566666 68999999998876432111100
Q ss_pred -------CCC------------------------ceeeeeecCCCCeEEEE-----------------------------
Q psy17682 347 -------TSN------------------------GVMFPLYDPDTNLVYLC----------------------------- 366 (490)
Q Consensus 347 -------~~~------------------------~i~~~~~s~~~~~l~~~----------------------------- 366 (490)
... .-..++++|+...+|+.
T Consensus 348 ~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 427 (668)
T 1kv9_A 348 AEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFAD 427 (668)
T ss_dssp EEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGG
T ss_pred ccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccc
Confidence 000 01126788887777652
Q ss_pred ------ecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682 367 ------GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC 427 (490)
Q Consensus 367 ------g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~ 427 (490)
...+|.|..||+.+++ .+-.+....+.....+...+.+++.+ ++.++.|+..+++.+
T Consensus 428 ~~~~p~~~~~g~l~A~D~~tG~----~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 428 ATDVPAAVVSGALLAWDPVKQK----AAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCCCCGGGCEEEEEEEETTTTE----EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCCCCCCccceEEEEeCCCCc----EEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 1134889999999997 33333333455555566665555555 457777887777633
No 272
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.47 E-value=0.00022 Score=66.62 Aligned_cols=235 Identities=13% Similarity=0.104 Sum_probs=127.2
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCC----
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSD---- 237 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~d---- 237 (490)
-...+.++|.|+| ++++ +..+|.|.+++ +++.......+ ...........++++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG-~l~V-~e~~g~I~~i~--~g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 30 LEVPWALAFLPDG-GMLI-AERPGRIRLFR--EGRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CSCEEEEEECTTS-CEEE-EETTTEEEEEE--TTEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCceEEEEcCCC-eEEE-EeCCCeEEEEE--CCCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3456799999998 5544 45679999998 33321110011 11123456899999998 44344444332
Q ss_pred -CcEEEEECCCCe-----eE-EEEe---cCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC----
Q psy17682 238 -NNVAIWNVGTGE-----IM-IQIE---CHPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG---- 290 (490)
Q Consensus 238 -g~v~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~---- 290 (490)
+.|..++...+. .+ ..+. ........++|.|+|.++++.+. .|.|.-++....
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 568888876431 12 1232 11123468999999976666432 256777776531
Q ss_pred --------ceeeee-eecCCCceeEEEEeC-CCcEEEEEeCCCcee-------EEEEecCCC--------C-------CC
Q psy17682 291 --------AIEEEA-VCHEGSKATRAIYLK-SGLIFTTGFSKMSER-------QYSLRAPDH--------L-------DE 338 (490)
Q Consensus 291 --------~~~~~~-~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~-------~i~iwd~~~--------~-------~~ 338 (490)
.....+ .++.. ...++|+| +|.++++-.. .+. .|.+..... . ..
T Consensus 184 npf~~~~~~~~~i~a~G~rn--p~g~a~d~~~g~l~v~d~g--~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHRN--PQGLAWHPKTGELFSSEHG--PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp CTTTTCTTSCTTEEEECCSE--ECCCEECTTTCCEEEEEEC--C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CcccCCCCCCccEEEEcCCC--cccEEEECCCCCEEEEEcC--CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 011111 12322 67789999 6777665432 122 233322111 0 01
Q ss_pred CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee---EEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682 339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV---HYINTFQTPDPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 413 (490)
+. ....+......++| .+|.. +++....+.|...++....... .....+.....+.++++.|||.+.++..
T Consensus 260 p~--~~~~~~~ap~G~~~-~~G~l-~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 260 PL--YFWPQGFPPGNLAF-FRGDL-YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CS--EECTTCCCEEEEEE-ETTEE-EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred Ce--EecCCCCCCcceEE-ECCEE-EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 11 11222334566777 45554 4666667788888887554211 1111112235789999999998777664
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=0.00053 Score=70.78 Aligned_cols=214 Identities=7% Similarity=-0.168 Sum_probs=131.7
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
.....+..|+|.+.++.++++-...+.|+.+++........ ....+.........|++.+.+.+++++-...+.|.+
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~---~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc---eeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEE
Confidence 34567889999986646666766778899998864321000 011122133456789999887667777777889999
Q ss_pred EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 320 (490)
.++........+.........|++.|.+..|+.+. .. +.|...++..... ..+....-.....+++++.+..|..+.
T Consensus 498 ~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 99975544333444455688999999765555544 33 6799998875443 333322223488999997755554443
Q ss_pred CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
. ....|...++....................+++ .+..||++-...+.|...+..+++..
T Consensus 577 ~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 577 S--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp T--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred C--CCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcce
Confidence 2 456889999876443222221111223445555 45578788778888988887777643
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.39 E-value=0.00047 Score=68.91 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=125.4
Q ss_pred CCCcEEEEECCCCCcccccccceeeec-----------------------------cc-ccCE-EEEEEeeCCCCEEEEE
Q psy17682 186 EDCVVKVWQIPDGGISRTLTEPVVDLL-----------------------------YH-QRRV-GLVLWHPTAQNVLLTA 234 (490)
Q Consensus 186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------------------------~~-~~~v-~~~~~~p~~~~~l~s~ 234 (490)
.+|.|+.+|.++++.+..+........ .+ ...+ ..+++.+... +++.+
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g 258 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFG 258 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCC-EEEEe
Confidence 379999999999988765432110000 00 0011 1345666664 66666
Q ss_pred eCC----------------CcEEEEECCCCeeEEEEecCCC----------cEEEEEEc-CCC---CEEEEEeCCCeEEE
Q psy17682 235 GSD----------------NNVAIWNVGTGEIMIQIECHPD----------IVYSASWN-WDG---SKLLTTCKDKKMRI 284 (490)
Q Consensus 235 ~~d----------------g~v~iwd~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~i 284 (490)
..+ +.|.-+|.++|+.+..++.... ++. +... .+| ..++.++.+|.+++
T Consensus 259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~ 337 (599)
T 1w6s_A 259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYT 337 (599)
T ss_dssp CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEE
T ss_pred CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEE
Confidence 554 3799999999999988873221 122 2222 467 46777889999999
Q ss_pred EeCCCCceeeeeeecC------------CCc--------------------------eeEEEEeCCCcEEEEEeC-----
Q psy17682 285 INPRTGAIEEEAVCHE------------GSK--------------------------ATRAIYLKSGLIFTTGFS----- 321 (490)
Q Consensus 285 wd~~~~~~~~~~~~~~------------~~~--------------------------~~~~~~s~~~~~l~~~~~----- 321 (490)
+|.++++.+....... +.+ ...++++|+..++.+...
T Consensus 338 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~ 417 (599)
T 1w6s_A 338 LDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMD 417 (599)
T ss_dssp EETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEE
T ss_pred EECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEecccccee
Confidence 9999999877654211 100 124567777655544310
Q ss_pred -------------------------CC------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682 322 -------------------------KM------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370 (490)
Q Consensus 322 -------------------------~~------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d 370 (490)
.+ ..+.|.-||+.+++..-.... ......-.....+..+| .++.|
T Consensus 418 ~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagg~vf-~gt~d 493 (599)
T 1w6s_A 418 WEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTMATAGDLVF-YGTLD 493 (599)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEE-EECTT
T ss_pred eecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC---CCCccCcceEecCCEEE-EECCC
Confidence 01 247888889888764333221 11122212233566774 58899
Q ss_pred CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682 371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC 408 (490)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~ 408 (490)
+.++.||.++++.+.+. .........-+.+..+|+.
T Consensus 494 g~l~A~D~~tG~~lW~~--~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 494 GYLKARDSDTGDLLWKF--KIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp SEEEEEETTTCCEEEEE--ECSSCCCSCCEEEEETTEE
T ss_pred CeEEEEECCCCCEEEEe--eCCCCcEeccEEEEeCCEE
Confidence 99999999999843222 1122222234566677753
No 275
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.38 E-value=0.00042 Score=64.69 Aligned_cols=252 Identities=10% Similarity=0.036 Sum_probs=133.1
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeC-----
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGS----- 236 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~----- 236 (490)
-...+.|+|.|+| +.|+.+...|.|++++. .++....+................++++|+ +..+.++-..
T Consensus 17 l~~P~~i~~~pdG-~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDN-HGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTT-CCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCC-CEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467899999998 52444556799999984 332211111100011113456789999995 4334444332
Q ss_pred --CCcEEEEECCCC--e--eEEE-Eec------CCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC
Q psy17682 237 --DNNVAIWNVGTG--E--IMIQ-IEC------HPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG 290 (490)
Q Consensus 237 --dg~v~iwd~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~ 290 (490)
...|..+++... . .... +.. .......++|.|||.++++.+. .|.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235666666432 1 1111 111 1122457999999976666543 246777776532
Q ss_pred c------------eeeee-eecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEe--------cCCCC------------
Q psy17682 291 A------------IEEEA-VCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLR--------APDHL------------ 336 (490)
Q Consensus 291 ~------------~~~~~-~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iw--------d~~~~------------ 336 (490)
- ....+ .++.+ ...++|+| +|+++++-........|.+. .....
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rn--p~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRN--PQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSE--EEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcC--ccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 0 11111 13332 78899999 67777654311001123221 11000
Q ss_pred ---CC---CeEEEeccCCCceeeeeecC-------CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEE
Q psy17682 337 ---DE---PIVMVELDTSNGVMFPLYDP-------DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGM 402 (490)
Q Consensus 337 ---~~---~~~~~~~~~~~~i~~~~~s~-------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~ 402 (490)
.. ........+......+.|.. +|+++ ++.-..+.|...++..++. ......+ .....+.++++
T Consensus 253 ~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~-v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLF-IGALKDKDVIVMSVNGDKV-TEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp CBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEE-EEETTTTEEEEEEEETTEE-EEEEEESGGGCCCEEEEEE
T ss_pred cCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEE-EEEccCCEEEEEEeCCCeE-eeeEEcccCCCCceeEEEE
Confidence 00 00011112334566677754 45555 6666778888888886532 2111111 12347899999
Q ss_pred eeCceeEEeec-ceeEEEEec
Q psy17682 403 MPKRGCDVNSC-EIGRFFRLN 422 (490)
Q Consensus 403 sp~~~~l~~~~-~~~~~~~~~ 422 (490)
.|||.+.++.+ ...+||++.
T Consensus 331 ~pdG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 331 GPDGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp CTTSCEEEEECSTTEEEEEEE
T ss_pred CCCCcEEEEEeCCCCEEEEEe
Confidence 99998877654 577888875
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.38 E-value=0.00081 Score=63.92 Aligned_cols=234 Identities=7% Similarity=-0.017 Sum_probs=138.5
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC----eeEEEEe
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIE 255 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~ 255 (490)
+|+.+. ...|+..++........+ .....+..++|++.+..++.+-...+.|..+++... .....+.
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred eeEEec-cceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 444444 467888888765433221 244568899999876545555556788999998652 2233333
Q ss_pred cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecC
Q psy17682 256 CHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAP 333 (490)
Q Consensus 256 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~ 333 (490)
........+++.+ .++++++-...+.|.+.++........+.. .......+++.|.+ .++.+-. +..+.|...++
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~--~~~~~I~~~~~ 232 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGL 232 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEEC--SSSCCEEEEET
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeC--CCCCEEEEEeC
Confidence 3445678999998 445555556678999999886554333332 22348899999864 4444432 12367888888
Q ss_pred CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682 334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 413 (490)
+.... ..+.. ........+++++++..||++-...+.|..+|+.... ....+..........++++..+ .+.++..
T Consensus 233 dG~~~-~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~~-~lywtd~ 308 (400)
T 3p5b_L 233 NGVDI-YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDI 308 (400)
T ss_dssp TSCSC-EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEETT-EEEEEES
T ss_pred CCCcc-EEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeCC-EEEEecC
Confidence 75332 22221 2234578899999999998887778899999987643 2222221111123457777443 4445544
Q ss_pred ceeEEEEe--cCCCceEE
Q psy17682 414 EIGRFFRL--NNSGLCQV 429 (490)
Q Consensus 414 ~~~~~~~~--~~~~~~~~ 429 (490)
...+|+.+ .+++.+..
T Consensus 309 ~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 309 INEAIFSANRLTGSDVNL 326 (400)
T ss_dssp SSCSEEEEESSSCCCCEE
T ss_pred CCCeEEEEEcCCCCceEE
Confidence 43344444 34443333
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=8.6e-05 Score=71.41 Aligned_cols=239 Identities=11% Similarity=0.104 Sum_probs=132.5
Q ss_pred CCeeEEEECC-CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CC----c
Q psy17682 166 GPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DN----N 239 (490)
Q Consensus 166 ~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg----~ 239 (490)
.....|+++| ++ ..|+.+...+.|+.+|+..+..... .........++|++++. .|+.+.. ++ .
T Consensus 137 ~~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~~--------~~~~~~P~~ia~d~~G~-~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 137 GGAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVSTV--------YSGLSKVRTICWTHEAD-SMIITNDQNNNDRPN 206 (430)
T ss_dssp SCCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEEE--------ECCCSCEEEEEECTTSS-EEEEEECCSCTTSEE
T ss_pred CCCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEEE--------ecCCCCcceEEEeCCCC-EEEEEeCCCCcccce
Confidence 3567889998 34 3455554448899999876543221 11345678999999985 4444443 22 2
Q ss_pred EEEEECCCCeeE--EEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682 240 VAIWNVGTGEIM--IQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF 316 (490)
Q Consensus 240 v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 316 (490)
+.+.+. .+... ..+.. ......++++| ++.++++-..++.|+.++...+................++++|+|++|
T Consensus 207 v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 207 NYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp EEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred EEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 333443 23221 22322 23456788999 677676666788999999987654222222222347889999999955
Q ss_pred EEEeCCCceeEEEEecCCCCCC----CeEEEec-cC------------CCcee-eeeec--------CCCCeEEEEecCC
Q psy17682 317 TTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DT------------SNGVM-FPLYD--------PDTNLVYLCGKGD 370 (490)
Q Consensus 317 ~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~------------~~~i~-~~~~s--------~~~~~l~~~g~~d 370 (490)
..... ..+.|..++.+.... +..+... .. ..... .++.. ++| .|+++-...
T Consensus 285 yv~d~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n 361 (430)
T 3tc9_A 285 YIVVV--NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDREN 361 (430)
T ss_dssp EEEET--TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGG
T ss_pred EEEEC--CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCC
Confidence 44432 467788877653211 1122211 00 00112 33332 234 444666667
Q ss_pred CeEEEEEecCCCCeeEEeee----eeC-----------CCceeeEEEee-CceeEEeecceeEEEEe
Q psy17682 371 SVIRYFEITAEPPFVHYINT----FQT-----------PDPQRGIGMMP-KRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~----~~~-----------~~~i~~~~~sp-~~~~l~~~~~~~~~~~~ 421 (490)
+.|+.++ .++. +...... ... -....+++++| ++.+.++.....++.++
T Consensus 362 ~~I~~i~-~~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 362 HCIRILT-PQGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp TEEEEEC-TTSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred cEEEEEC-CCCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 7888887 3342 2222211 000 01468899999 57777766554444443
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.0002 Score=68.86 Aligned_cols=240 Identities=9% Similarity=0.163 Sum_probs=135.1
Q ss_pred CCeeEEEECCC--CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---C-c
Q psy17682 166 GPVLDIAWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---N-N 239 (490)
Q Consensus 166 ~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g-~ 239 (490)
....+++|+|+ + ..|+.+...+.|+.++..++...... .......++++++++. ++++.... . .
T Consensus 139 ~~P~gvavd~~s~~-g~Lyv~D~~~~I~~id~~~g~v~~~~--------~~~~~P~giavd~dG~-lyVad~~~~~~~~g 208 (433)
T 4hw6_A 139 DNIWRMMFDPNSNY-DDLYWVGQRDAFRHVDFVNQYVDIKT--------TNIGQCADVNFTLNGD-MVVVDDQSSDTNTG 208 (433)
T ss_dssp SCCCEEEECTTTTT-CEEEEECBTSCEEEEETTTTEEEEEC--------CCCSCEEEEEECTTCC-EEEEECCSCTTSEE
T ss_pred CCCceEEEccccCC-CEEEEEeCCCCEEEEECCCCEEEEee--------cCCCCccEEEECCCCC-EEEEcCCCCcccce
Confidence 34678999985 3 34444444489999998766543221 1344689999999996 55554321 1 1
Q ss_pred EEEEECCCCee-EEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEE
Q psy17682 240 VAIWNVGTGEI-MIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIF 316 (490)
Q Consensus 240 v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l 316 (490)
+...+...+.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+.. ........++++|+|..|
T Consensus 209 v~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 209 IYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp EEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred EEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 33333222111 11222 233456788999 677666666778999999987765333321 122224579999999855
Q ss_pred EEEeCCCceeEEEEecCCCCCC----CeEEEec-cC------------CCceeeeee---------cCCCCeEEEEecCC
Q psy17682 317 TTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DT------------SNGVMFPLY---------DPDTNLVYLCGKGD 370 (490)
Q Consensus 317 ~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~------------~~~i~~~~~---------s~~~~~l~~~g~~d 370 (490)
..+.. ..+.|..++...... +..+... .. -.....+++ .++|++ +++-...
T Consensus 288 Yvad~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l-yvaD~~n 364 (433)
T 4hw6_A 288 YIIYN--GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF-YFCDRDS 364 (433)
T ss_dssp EEEET--TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE-EEEETTT
T ss_pred EEEeC--CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE-EEEECCC
Confidence 44432 467888877653211 1122211 10 112456788 566654 4777777
Q ss_pred CeEEEEEecCCCCeeEEeee-------eeC--------CCceeeEEEe-eCceeEEeecceeEEEEe
Q psy17682 371 SVIRYFEITAEPPFVHYINT-------FQT--------PDPQRGIGMM-PKRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~-------~~~--------~~~i~~~~~s-p~~~~l~~~~~~~~~~~~ 421 (490)
+.|+.++. ++. +...... +.. -....+|+++ +++.+.++.....++.++
T Consensus 365 ~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 365 HTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp TEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred CEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 88998874 332 2211111 000 0235789999 677777766554444443
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.36 E-value=4.5e-05 Score=79.14 Aligned_cols=160 Identities=10% Similarity=-0.053 Sum_probs=97.2
Q ss_pred CEEEEEEe-eCCCCEEEEEeCCC----cEEEEECCCC-eeEE-EEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEE
Q psy17682 217 RVGLVLWH-PTAQNVLLTAGSDN----NVAIWNVGTG-EIMI-QIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRI 284 (490)
Q Consensus 217 ~v~~~~~~-p~~~~~l~s~~~dg----~v~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i 284 (490)
.+...+|+ |+|+.+.++...+| .|+++|+.++ +.+. .+.. ....++|+|||+.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99974444444443 4999999988 6321 1111 12468899999888877765 36888
Q ss_pred EeCCCCcee--eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEeccCCCceeeeeecCCC
Q psy17682 285 INPRTGAIE--EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELDTSNGVMFPLYDPDT 360 (490)
Q Consensus 285 wd~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~ 360 (490)
+++.++... ..+..........+.|+|||++|+..........|.++|+.+..... ............++.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 999876532 22222222236678999999988776644456789999998753222 111111222334444433 6
Q ss_pred CeEEEEecCC----CeEEEEEecC
Q psy17682 361 NLVYLCGKGD----SVIRYFEITA 380 (490)
Q Consensus 361 ~~l~~~g~~d----g~i~iwd~~~ 380 (490)
+.|++....+ ..|..+++.+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTS
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCC
Confidence 6655665444 3566666654
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.35 E-value=0.00015 Score=69.82 Aligned_cols=202 Identities=11% Similarity=0.098 Sum_probs=119.8
Q ss_pred CEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC---C-eEEEEeCCCC
Q psy17682 217 RVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD---K-KMRIINPRTG 290 (490)
Q Consensus 217 ~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~i~iwd~~~~ 290 (490)
....++|.|+ +. .|+.+...+.|+.+|+.+++.... .........++++++|+++++.... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3568999985 33 455554448899999987765543 3345668999999999944444321 1 2333433222
Q ss_pred cee-eeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682 291 AIE-EEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 291 ~~~-~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
... ..+. . ......++++| +|.++++-. ..+.|+.+|..++.....+........-..++|+|+|+.||++-.
T Consensus 218 ~~~~~~~~-~-~~~P~giavd~~~G~lyv~d~---~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 218 FTERLSLC-N-ARGAKTCAVHPQNGKIYYTRY---HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp TCCEEEEE-E-CSSBCCCEECTTTCCEEECBT---TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred eecccccc-c-cCCCCEEEEeCCCCeEEEEEC---CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 111 1121 1 22367788999 677766554 467899999875542112222222222346999999998888888
Q ss_pred CCCeEEEEEecCCC-Cee---EEeeeeeC------------CCceeeEEE---------eeCceeEEeecceeEEEEecC
Q psy17682 369 GDSVIRYFEITAEP-PFV---HYINTFQT------------PDPQRGIGM---------MPKRGCDVNSCEIGRFFRLNN 423 (490)
Q Consensus 369 ~dg~i~iwd~~~~~-~~~---~~~~~~~~------------~~~i~~~~~---------sp~~~~l~~~~~~~~~~~~~~ 423 (490)
..+.|+.++..... .+. ........ -....++++ .+++.+.++.....++..+..
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 88999998876321 110 11111000 023567898 677777777666556666665
Q ss_pred CC
Q psy17682 424 SG 425 (490)
Q Consensus 424 ~~ 425 (490)
..
T Consensus 373 ~G 374 (433)
T 4hw6_A 373 EG 374 (433)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.34 E-value=0.00017 Score=72.02 Aligned_cols=234 Identities=11% Similarity=-0.024 Sum_probs=137.5
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-EEEeeCCCCEEEEEeC------CCcEEEEECCCCeeE
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-VLWHPTAQNVLLTAGS------DNNVAIWNVGTGEIM 251 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~~------dg~v~iwd~~~~~~~ 251 (490)
..++.++.|+.+..+|..+++.+......... ....+.+ ... .++ .++.++. ++.|..+|.++|+.+
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~---~~~~~~~~P~v-~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPK---VGSTLTQAPFV-AKD--TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGG---GTCBCCSCCEE-ETT--EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCC---ccceeccCCEE-ECC--EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 47788888999999999999887654321100 0001111 111 133 4555554 789999999999998
Q ss_pred EEEecCCCc--------------------------------------EEEEEEcCCCCEEEEEeCC--------------
Q psy17682 252 IQIECHPDI--------------------------------------VYSASWNWDGSKLLTTCKD-------------- 279 (490)
Q Consensus 252 ~~~~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d-------------- 279 (490)
.++...... ...+++.++...++.++.+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 887632111 0135666766666666532
Q ss_pred --CeEEEEeCCCCceeeeeeecCC--------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 280 --KKMRIINPRTGAIEEEAVCHEG--------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 280 --g~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
+.|..+|.++++.+..+..... .....+....+|+ +++.++ .++.+++.|..+++.........
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID---RNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC---TTSEEEEEETTTCCEEEEEESST
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC---CCcEEEEEECCCCCEEeeecccC
Confidence 3699999999998887763210 1122222334674 566666 57899999998876432222111
Q ss_pred -----------CCCce--------------------------eeeeecCCCCeEEEEec---------------------
Q psy17682 347 -----------TSNGV--------------------------MFPLYDPDTNLVYLCGK--------------------- 368 (490)
Q Consensus 347 -----------~~~~i--------------------------~~~~~s~~~~~l~~~g~--------------------- 368 (490)
....+ ..++++|+...+|+...
T Consensus 347 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 347 AVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp TCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred CccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccc
Confidence 00011 24678888888866431
Q ss_pred ---------------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682 369 ---------------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG 425 (490)
Q Consensus 369 ---------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~ 425 (490)
.+|.|..||+.+++. +..+....++.+......+.++..+ ++.+..++..+++
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~----~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKA----KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCE----EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCE----EEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 357899999999873 2333333344444444333333333 4567777777777
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.34 E-value=0.0012 Score=60.60 Aligned_cols=229 Identities=7% Similarity=-0.059 Sum_probs=139.9
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ 215 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (490)
...|+.+++... . . ....+......+.+++|++.++.++.+-...+.|..+++..+.....+ +...-
T Consensus 12 ~~~I~~i~l~~~----~--~-~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~------~~~~l 78 (318)
T 3sov_A 12 RRDLRLVDATNG----K--E-NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------VVSGL 78 (318)
T ss_dssp EEEEEEEETTCT----T--S-CCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE------EEECC
T ss_pred cCeEEEEECCCC----c--e-EEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE------EcCCC
Confidence 466777777521 1 0 111222223457789999866467777677789999998765321111 11122
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCcee
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIE 293 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~ 293 (490)
.....+++.+.+.+++++-...+.|.++++........+.........+++.|.+..|+.+. ..+.|...++.... .
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~ 157 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-R 157 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-C
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-e
Confidence 34678899876655666666678999999865433333334456678999999766555555 25788888876433 2
Q ss_pred eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682 294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI 373 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i 373 (490)
..+....-.....+++++++..|..+.. ..+.|..+|++.... ..+.. ........+++. +..+|.+-...+.|
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~-~~~~~P~glav~--~~~lywtd~~~~~V 231 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNR-QAVVK-GSLPHPFALTLF--EDILYWTDWSTHSI 231 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEEC-SCCSCEEEEEEE--TTEEEEEETTTTEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCce-EEEec-CCCCCceEEEEe--CCEEEEEecCCCeE
Confidence 3332222234789999997555544432 467899999875332 22222 223345566664 44666777778899
Q ss_pred EEEEecCCCCe
Q psy17682 374 RYFEITAEPPF 384 (490)
Q Consensus 374 ~iwd~~~~~~~ 384 (490)
..++..+++..
T Consensus 232 ~~~~~~~G~~~ 242 (318)
T 3sov_A 232 LACNKYTGEGL 242 (318)
T ss_dssp EEEETTTCCSC
T ss_pred EEEECCCCCce
Confidence 99999877643
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.28 E-value=2.2e-05 Score=80.19 Aligned_cols=247 Identities=11% Similarity=0.074 Sum_probs=134.0
Q ss_pred EEEECC-CCCCEEEEEeCCC-----------cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-
Q psy17682 170 DIAWSP-HDDNVIASGSEDC-----------VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS- 236 (490)
Q Consensus 170 ~~~~~p-~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~- 236 (490)
.+++.| ++ .+++.|+.+. .+.+||..+++...... ....+.....++++.+++. +++.|+.
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~----~~~~~~~~~~~~~~~~~g~-lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV----TVTKHDMFCPGISMDGNGQ-IVVTGGND 263 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE----EECSCCCSSCEEEECTTSC-EEEECSSS
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc----cCCCCCCccccccCCCCCC-EEEeCCCC
Confidence 456666 55 7888887543 58899988776432211 0111333344577778885 8888884
Q ss_pred CCcEEEEECCCCeeEEEEecCC-CcEEEEEEcCCCCEEEEEe-CC-----CeEEEEeCCCCceeeee----eecCCCcee
Q psy17682 237 DNNVAIWNVGTGEIMIQIECHP-DIVYSASWNWDGSKLLTTC-KD-----KKMRIINPRTGAIEEEA----VCHEGSKAT 305 (490)
Q Consensus 237 dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~----~~~~~~~~~ 305 (490)
+..+.+||..+.+-...-..+. ..-.+++..+++++++.|+ .+ ..+.+||..+.+-...- ...... -.
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DK 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CT
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc-cc
Confidence 4689999998765332211111 1123456667899999988 34 46999999876533210 000000 00
Q ss_pred EEEEeCCCcEEEEEeCCC------ceeEEEEecCCCCCCCeEEEeccC-------CCceeeeeecCCCCeEEEEecCCC-
Q psy17682 306 RAIYLKSGLIFTTGFSKM------SERQYSLRAPDHLDEPIVMVELDT-------SNGVMFPLYDPDTNLVYLCGKGDS- 371 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~~~------~~~~i~iwd~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~g~~dg- 371 (490)
...+..++.+++.|+.++ ....+..||..+............ ...-..+.|...+..|++.|+.++
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 011234455555554211 134678888876542111111100 112234445443445557777532
Q ss_pred ----------eEEEEEecCCCCeeEEee--eeeCCCceeeEEEeeCceeEEeec-------------ceeEEEEecCCC
Q psy17682 372 ----------VIRYFEITAEPPFVHYIN--TFQTPDPQRGIGMMPKRGCDVNSC-------------EIGRFFRLNNSG 425 (490)
Q Consensus 372 ----------~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~-------------~~~~~~~~~~~~ 425 (490)
.|.+||..+.+ . ..+. .......-.+.+..|++++++.++ ..+.+|+..++.
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~-W-~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSP-N-TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCC-E-EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCcCCcceEEEcCCCCCCC-e-eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 67788877664 1 1221 222222234556778998888775 245778877655
No 284
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.27 E-value=0.0012 Score=61.62 Aligned_cols=246 Identities=11% Similarity=0.044 Sum_probs=134.1
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc-cceeeecccccCEEEEEEeeC---CCCEEEEEeC---C-
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT-EPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGS---D- 237 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~---d- 237 (490)
.....|+|.|+| + |+.+..+|.|++++ .+++ ..+. .+ ...........++++|+ +..++++-.. +
T Consensus 29 ~~P~~ia~~pdG-~-l~V~e~~g~I~~~d-~~G~--~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGG-R-YLVTERPGRLVLIS-PSGK--KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETT-E-EEEEETTTEEEEEC-SSCE--EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCC-e-EEEEeCCCEEEEEe-CCCc--eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 457899999988 5 55556679999987 3443 1111 11 11112356899999997 4334444332 3
Q ss_pred ---CcEEEEECCCC-------eeE-EEEec-CCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC--
Q psy17682 238 ---NNVAIWNVGTG-------EIM-IQIEC-HPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG-- 290 (490)
Q Consensus 238 ---g~v~iwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~-- 290 (490)
..|..|+.... +.+ ..+.. .......++|.|+|.++++.+. .|.|.-++....
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 56777776543 111 11221 1123467999999987776432 256666665432
Q ss_pred ------ceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCC--------C-------CCCeEEEec-cC
Q psy17682 291 ------AIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDH--------L-------DEPIVMVEL-DT 347 (490)
Q Consensus 291 ------~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~--------~-------~~~~~~~~~-~~ 347 (490)
....-..++.. ...++|+| +|.++++-........|.+..... . ..+. ... ..
T Consensus 182 ~~npf~~~~i~a~G~rn--p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~--~~~~~~ 257 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRN--PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPV--IDTGSE 257 (354)
T ss_dssp TTSSSTTCCEEEECCSC--CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS--EECTTC
T ss_pred CCCCCCCCcEEEEccCC--cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCE--eecCCC
Confidence 11111123333 67899999 687776643211112333322111 0 0111 111 22
Q ss_pred CCceeeeeec-------CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeecc-ee--
Q psy17682 348 SNGVMFPLYD-------PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE-IG-- 416 (490)
Q Consensus 348 ~~~i~~~~~s-------~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~~-- 416 (490)
......++|. .+|+++ ++....+.|...++............+. ....+.++++.|||.+.++... ..
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G~l~-v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~~~G~g 336 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRGWLL-IACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSNRDGRG 336 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTTEEE-EEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECTTSSSS
T ss_pred CcCCcceEEECCCCCcccCCcEE-EEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeCCCCCc
Confidence 3456777773 456555 6666678888888875422221111111 1346899999999987776642 33
Q ss_pred -------EEEEecC
Q psy17682 417 -------RFFRLNN 423 (490)
Q Consensus 417 -------~~~~~~~ 423 (490)
+||++..
T Consensus 337 ~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 337 SLRAGDDKILKIVS 350 (354)
T ss_dssp CCCTTCSCEEEEEE
T ss_pred CCCCCCCEEEEEec
Confidence 6777654
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.25 E-value=0.0057 Score=61.54 Aligned_cols=333 Identities=10% Similarity=-0.039 Sum_probs=171.0
Q ss_pred cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682 40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS 119 (490)
Q Consensus 40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 119 (490)
+...-+.+..++|++.++.++.+=-..+.|..+++...... ...... + ......+++.
T Consensus 35 ~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~---------------~~v~~~----~---~~~P~GlAvD 92 (619)
T 3s94_A 35 VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---------------QNVVVS----G---LLSPDGLACD 92 (619)
T ss_dssp -CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C---------------EEEECS----S---CSCEEEEEEE
T ss_pred EEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce---------------EEEEeC----C---CCCcCeEEEE
Confidence 33445567899999977566666555678888887653200 000000 0 0124456665
Q ss_pred cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCC
Q psy17682 120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPD 197 (490)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~ 197 (490)
+.. ..+.++-...+.|.+.++.. . ...++ ...-.....|++.|.++.++++-. ..+.|...++..
T Consensus 93 ~~~----~~ly~~d~~~~~I~v~~~dG------~---~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 93 WLG----EKLYWTDSETNRIEVSNLDG------S---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp TTT----TEEEEEETTTTEEEEEETTS------C---SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred ecC----CEEEEEeCCCCEEEEEECCC------C---CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC
Confidence 532 12444556778888888752 1 11122 233456778999997645555542 245676666543
Q ss_pred CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682 198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC 277 (490)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 277 (490)
. ....+. ...-.....+++.+++..++++=...+.|...|+..........+.......+++..+ ..+++-.
T Consensus 160 ~-~~~~l~------~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~ 231 (619)
T 3s94_A 160 S-SRFIII------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDW 231 (619)
T ss_dssp C-SCEEEE------CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECT
T ss_pred C-ceEEEE------eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecC
Confidence 2 222211 1123457899999987645555556678999998654332222212222346677654 4445545
Q ss_pred CCCeEEEEeCCCCceeeeeeecCCC------------------------ceeEEEE-eC----------CC---------
Q psy17682 278 KDKKMRIINPRTGAIEEEAVCHEGS------------------------KATRAIY-LK----------SG--------- 313 (490)
Q Consensus 278 ~dg~i~iwd~~~~~~~~~~~~~~~~------------------------~~~~~~~-s~----------~~--------- 313 (490)
..+.|...|..+++....+...... ....+++ +| .|
T Consensus 232 ~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~ 311 (619)
T 3s94_A 232 STHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT 311 (619)
T ss_dssp TTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSC
T ss_pred CCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcc
Confidence 6678888888776543322110000 0001111 11 11
Q ss_pred ------cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682 314 ------LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387 (490)
Q Consensus 314 ------~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~ 387 (490)
.+|+.+. .+.|+..++.................+..++|++.+..||.+-...+.|+.+++..... ...
T Consensus 312 C~~~~~~~Ll~~~----~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v 386 (619)
T 3s94_A 312 CKDGATELLLLAR----RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFV 386 (619)
T ss_dssp BCSSCSEEEEEEE----SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE
T ss_pred cCCCCceEEEEEc----ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEE
Confidence 1222222 23445455554332212222223345778999998888878777788899888876431 112
Q ss_pred eeeeeCCCceeeEEEee-CceeEEeecc--eeEEEEec
Q psy17682 388 INTFQTPDPQRGIGMMP-KRGCDVNSCE--IGRFFRLN 422 (490)
Q Consensus 388 ~~~~~~~~~i~~~~~sp-~~~~l~~~~~--~~~~~~~~ 422 (490)
+. ..-....++++.+ .+.+.++..+ .+.+.++.
T Consensus 387 ~~--~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 387 VT--AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp EC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EE--CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 21 1123567899986 4455555433 34444443
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.001 Score=64.15 Aligned_cols=159 Identities=7% Similarity=0.110 Sum_probs=102.8
Q ss_pred CEEEEEEeeC-CCCEEEEEeCCCcEEEEECCCCeeEEEEecC---CCcEEEEEE-------cCCCCEEEEEeCCC-----
Q psy17682 217 RVGLVLWHPT-AQNVLLTAGSDNNVAIWNVGTGEIMIQIECH---PDIVYSASW-------NWDGSKLLTTCKDK----- 280 (490)
Q Consensus 217 ~v~~~~~~p~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~dg----- 280 (490)
....|+|.|. +.+++++-...+.|++.|+.++......... ......++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4445666555578999999877665544321 235889999 99999666665543
Q ss_pred --eEEEEeCCC-Ccee-----eeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCC-------CCCC-----C
Q psy17682 281 --KMRIINPRT-GAIE-----EEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPD-------HLDE-----P 339 (490)
Q Consensus 281 --~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~-------~~~~-----~ 339 (490)
.+.+++... +... ..+.... ....++.+|+ +.++++-. ..+.|..+|+. ++.. +
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd~---~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNSY---EKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEET---TTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEEC---CCCEEEEEecccccccccCceeeccccc
Confidence 366776443 2221 2222212 2567788995 55565555 56789999987 4432 0
Q ss_pred ------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 340 ------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 340 ------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
..+...........++|+|+|++||++-+..+.|+.++...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 12222333344678999999998878877888999977754
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.00043 Score=66.52 Aligned_cols=155 Identities=11% Similarity=0.155 Sum_probs=101.0
Q ss_pred CEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCC
Q psy17682 217 RVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DK----KMRIINPRTG 290 (490)
Q Consensus 217 ~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~ 290 (490)
....++++| ++. .|+.+...+.|+.+|+..++... +.........++++++++.|+++.. ++ .+..++. .+
T Consensus 138 ~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457889997 343 45555444889999998766444 3335566889999999996666554 22 3444443 33
Q ss_pred cee--eeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682 291 AIE--EEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG 367 (490)
Q Consensus 291 ~~~--~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g 367 (490)
... ..+.. ......++++| +|.++++-. ..+.|..++....... .+...........++|+|+|++|+++-
T Consensus 215 ~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELTK--GQNCNGAETHPINGELYFNSW---NAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp TSCSEEEEEE--CSSCCCEEECTTTCCEEEEET---TTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceeeeeeecc--CCCceEEEEeCCCCEEEEEEC---CCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 222 22322 12367788999 677776654 4678999998754321 222222223467899999999888888
Q ss_pred cCCCeEEEEEecC
Q psy17682 368 KGDSVIRYFEITA 380 (490)
Q Consensus 368 ~~dg~i~iwd~~~ 380 (490)
...+.|..++...
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 8889999998874
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.21 E-value=0.00055 Score=61.87 Aligned_cols=160 Identities=10% Similarity=0.057 Sum_probs=107.0
Q ss_pred cccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEEE-Eec----C--CCcEEEEEE---cCCCCEEEEEe-----
Q psy17682 214 HQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMIQ-IEC----H--PDIVYSASW---NWDGSKLLTTC----- 277 (490)
Q Consensus 214 ~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~----- 277 (490)
......++.|++... .|..++ ..++|..||...+..... +.. . ...+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 444556889998765 455555 789999999975543333 221 1 114689999 68877777544
Q ss_pred --------CCCeEEEEeCC---CCceeeeeeec------------CCCceeEEEEeCCCcEEEEEeCCCce-eEEEEecC
Q psy17682 278 --------KDKKMRIINPR---TGAIEEEAVCH------------EGSKATRAIYLKSGLIFTTGFSKMSE-RQYSLRAP 333 (490)
Q Consensus 278 --------~dg~i~iwd~~---~~~~~~~~~~~------------~~~~~~~~~~s~~~~~l~~~~~~~~~-~~i~iwd~ 333 (490)
.++.|..||+. +++.+...... .......++..++|+..++++ .. +.|...+.
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s---~~~~~I~rV~p 166 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA---LGMPAIARVSA 166 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE---ESSCEEEEECT
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC---CCCCeEEEEeC
Confidence 26789999999 77766554311 111377899999999999887 44 56666666
Q ss_pred CCCCCCeEEEec-----cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682 334 DHLDEPIVMVEL-----DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 334 ~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
+.. ....... ....+.+.++++|+|+.|++..+ .|.+..+|+..
T Consensus 167 dG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 167 DGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp TSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred CCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 543 2221111 11234678999999999977666 99999999884
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.15 E-value=0.00048 Score=68.85 Aligned_cols=151 Identities=9% Similarity=-0.057 Sum_probs=94.7
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-EEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEE
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-VLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMI 252 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~ 252 (490)
+++.++.|+.+..+|..+|+.+........ . ....+.+ ... .++ .+++++ .++.|+-+|.++|+.+.
T Consensus 123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~--~-~~~~~~ssP~v-~~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 123 LILKTQLDGNVAALNAETGETVWKVENSDI--K-VGSTLTIAPYV-VKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCG--G-GTCBCCSCCEE-ETT--EEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEEEeecCCCC--C-ccceeecCCEE-ECC--EEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 377788899999999999987765432100 0 0001111 111 133 455554 37999999999999988
Q ss_pred EEecCCCc-------------------------------------E-EEEEEcCCCCEEEEEeCC---------------
Q psy17682 253 QIECHPDI-------------------------------------V-YSASWNWDGSKLLTTCKD--------------- 279 (490)
Q Consensus 253 ~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d--------------- 279 (490)
++...... + ..+++.++...++.++.+
T Consensus 197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y 276 (599)
T 1w6s_A 197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW 276 (599)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccc
Confidence 87632211 0 134566777777777655
Q ss_pred -CeEEEEeCCCCceeeeeeecCCC--------ceeEEEEe-CCC---cEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 280 -KKMRIINPRTGAIEEEAVCHEGS--------KATRAIYL-KSG---LIFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 280 -g~i~iwd~~~~~~~~~~~~~~~~--------~~~~~~~s-~~~---~~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
+.|..+|..+++.+..+...... ....+... .+| ..++.++ .++.+.+.|.++++..
T Consensus 277 ~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD---RNGIVYTLDRTDGALV 346 (599)
T ss_dssp SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC---TTSEEEEEETTTCCEE
T ss_pred cceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC---CCcEEEEEECCCCCEe
Confidence 38999999999998877632210 11222222 567 5666666 6889999999887643
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.11 E-value=0.0057 Score=63.12 Aligned_cols=222 Identities=9% Similarity=0.015 Sum_probs=132.3
Q ss_pred CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC----eeEEEEecCCCcE
Q psy17682 186 EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIECHPDIV 261 (490)
Q Consensus 186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~v 261 (490)
....|+..++........ ......+..++|.+.+..++++-...+.|+.+++... .....+.......
T Consensus 402 n~~~Ir~i~l~~~~~~~l--------~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSL--------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp CBSSEEEECTTSCCCEEE--------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccceeEeeccCCcceee--------ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 345688888765543221 1234567899999866546666666788999998652 2223333234556
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 262 YSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 262 ~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
..|++.+.++ ++++-...+.|.+.++..... ..+..........+++.|. |.++++-. +..+.|...++.....
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~--g~~~~I~~~~~dG~~~- 549 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVDI- 549 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCCE-
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecC--CCCCeEEEEecCCCce-
Confidence 7899988765 555555678999999885543 3333333334889999997 55555432 1236788888875332
Q ss_pred eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEE
Q psy17682 340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFF 419 (490)
Q Consensus 340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~ 419 (490)
..+.. ........|++++.+..||++-...+.|..+++.... ....+.....-....+|++..+ .+.++.....+|+
T Consensus 550 ~~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 550 YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF 626 (791)
T ss_dssp EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEE
T ss_pred EEEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEE
Confidence 22221 2234578899999888888887777889999986554 2222211111123456666544 4445544444555
Q ss_pred Eec
Q psy17682 420 RLN 422 (490)
Q Consensus 420 ~~~ 422 (490)
.+.
T Consensus 627 ~~d 629 (791)
T 3m0c_C 627 SAN 629 (791)
T ss_dssp EEE
T ss_pred EEe
Confidence 553
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.09 E-value=0.0021 Score=64.21 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=93.5
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceee--ecccccCEEEEEEee--CCCCEEEEEe------CCCcEEEEECCCC
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVD--LLYHQRRVGLVLWHP--TAQNVLLTAG------SDNNVAIWNVGTG 248 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~p--~~~~~l~s~~------~dg~v~iwd~~~~ 248 (490)
..++.++.|+.|..+|.++|+.+......... ......++. ... +++..+++++ .++.|.-+|..+|
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v---~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI---VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE---EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEE---eCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 46778888999999999999887654321100 000111111 111 1221455554 3789999999999
Q ss_pred eeEEEEecCCCcE-----------------------------------------EEEEEcCCCCEEEEEeC---------
Q psy17682 249 EIMIQIECHPDIV-----------------------------------------YSASWNWDGSKLLTTCK--------- 278 (490)
Q Consensus 249 ~~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~--------- 278 (490)
+.+.........+ ..+++.|+...++.++.
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 9887664311100 13456666677776663
Q ss_pred -----------C----CeEEEEeCCCCceeeeeee--cCC------CceeEEEEe-CCCc---EEEEEeCCCceeEEEEe
Q psy17682 279 -----------D----KKMRIINPRTGAIEEEAVC--HEG------SKATRAIYL-KSGL---IFTTGFSKMSERQYSLR 331 (490)
Q Consensus 279 -----------d----g~i~iwd~~~~~~~~~~~~--~~~------~~~~~~~~s-~~~~---~l~~~~~~~~~~~i~iw 331 (490)
| +.|..+|..+++.+..+.. |.. .....+... .+|+ .++.++ .++.++++
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~---~~G~l~~l 351 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD---RNGFFYVV 351 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC---TTSEEEEE
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC---CCceEEEE
Confidence 2 5899999999999888763 210 011112222 4673 666676 68899999
Q ss_pred cCCCCCC
Q psy17682 332 APDHLDE 338 (490)
Q Consensus 332 d~~~~~~ 338 (490)
|..+++.
T Consensus 352 D~~tG~~ 358 (582)
T 1flg_A 352 DRSNGKL 358 (582)
T ss_dssp ETTTCCE
T ss_pred ECCCCCE
Confidence 9988764
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0023 Score=58.57 Aligned_cols=229 Identities=7% Similarity=-0.025 Sum_probs=135.3
Q ss_pred CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEEEecCCCcEEEEE
Q psy17682 187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQIECHPDIVYSAS 265 (490)
Q Consensus 187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~ 265 (490)
...|+..++........+ + +. .......+.|.+.+..++.+-...+.|..+++..+.. ...+.........++
T Consensus 12 ~~~I~~i~l~~~~~~~~~--~---~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKENATI--V---VG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTSCCEE--E---EE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred cCeEEEEECCCCceEEEE--E---ec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 467999998765321111 1 11 2235678999987654666666678899999876532 122222334566889
Q ss_pred EcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682 266 WNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV 343 (490)
Q Consensus 266 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~ 343 (490)
+.+.+ +++++-...+.|.++++..... ..+..........+++.|. |.++.+-. +..+.|...+++.... ..+.
T Consensus 86 vd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~--~~~~~I~r~~~dG~~~-~~~~ 161 (318)
T 3sov_A 86 CDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIII 161 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEEC--SSSCEEEEEETTSCSC-EEEE
T ss_pred EEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEec--CCCCEEEEEEcCCCCe-EEEE
Confidence 98744 5555555678999999875433 3332222234789999986 44444432 1256788888774332 2222
Q ss_pred eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682 344 ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL 421 (490)
Q Consensus 344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~ 421 (490)
. ........++++|++..||++-+..+.|..+++.... . +.+.. .......++++..+ .+.++.-. .+..++.
T Consensus 162 ~-~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~-~~~~~-~~~~~P~glav~~~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 162 N-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-R-QAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp C-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C-EEEEC-SCCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred E-CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-e-EEEec-CCCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence 1 2234468899999988988888888999999987543 1 12211 12234567777654 44444433 4444444
Q ss_pred cCCCceEEE
Q psy17682 422 NNSGLCQVV 430 (490)
Q Consensus 422 ~~~~~~~~i 430 (490)
.+++..+.+
T Consensus 237 ~~G~~~~~i 245 (318)
T 3sov_A 237 YTGEGLREI 245 (318)
T ss_dssp TTCCSCEEE
T ss_pred CCCCceEEE
Confidence 445534444
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.07 E-value=0.0067 Score=55.81 Aligned_cols=193 Identities=10% Similarity=0.033 Sum_probs=105.0
Q ss_pred ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI 242 (490)
Q Consensus 164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i 242 (490)
+.+.+..+.+.+++ ..++.+ .+|.| |... .++.-.... ......+..+.+.+++. +++.+ .+|.+..
T Consensus 120 ~~~~~~~i~~~~~~-~~~~~~-~~g~v--~~S~DgG~tW~~~~------~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~ 187 (327)
T 2xbg_A 120 LPGSPRLIKALGNG-SAEMIT-NVGAI--YRTKDSGKNWQALV------QEAIGVMRNLNRSPSGE-YVAVS-SRGSFYS 187 (327)
T ss_dssp CSSCEEEEEEEETT-EEEEEE-TTCCE--EEESSTTSSEEEEE------CSCCCCEEEEEECTTSC-EEEEE-TTSSEEE
T ss_pred CCCCeEEEEEECCC-CEEEEe-CCccE--EEEcCCCCCCEEee------cCCCcceEEEEEcCCCc-EEEEE-CCCcEEE
Confidence 34557788877655 555544 56654 3333 343322221 12445788999999874 66555 4455443
Q ss_pred -EEC--CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec---CCCceeEEEEeCCCcEE
Q psy17682 243 -WNV--GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH---EGSKATRAIYLKSGLIF 316 (490)
Q Consensus 243 -wd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l 316 (490)
.|- .+-+.+. ......+..+.+.++++.++ ++.+|.+++.+...++.-..+... ....+..+.+.+++.++
T Consensus 188 S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 188 TWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 342 2222321 23456788999999887554 556788877643323322222211 11237888899888888
Q ss_pred EEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682 317 TTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI 378 (490)
Q Consensus 317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~ 378 (490)
+++. ++.+ .+..+.+..-...... .....+..+.|.++++.+ + ++.+|.|.-++-
T Consensus 265 ~~g~----~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~-~-~G~~G~i~~~~~ 320 (327)
T 2xbg_A 265 LAGG----AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGF-I-LGQKGILLRYVT 320 (327)
T ss_dssp EEES----TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEE-E-ECSTTEEEEECC
T ss_pred EEeC----CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceE-E-EcCCceEEEEcC
Confidence 8875 4545 2333333322111111 123457788887655533 4 456887766553
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.05 E-value=2.9e-05 Score=79.46 Aligned_cols=204 Identities=7% Similarity=-0.162 Sum_probs=118.5
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCC----CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD----GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA 241 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~ 241 (490)
..+.+++|++.++.++++-...+.|+.+++.. ......+ .........|++.+.+.+++++-...+.|.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-------~~~~~~P~glavD~~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 478 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-------CSCC--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-------eCCCCCcceEEEEeeCCcEEEEeccCCeEE
Confidence 45678899987645555555668899999865 1111111 111123456788765555666656678899
Q ss_pred EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
++++........+.........++++|.+.+|+.+. .. +.|..+++.... ...+....-.....++++|++..|..+
T Consensus 479 v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 479 VADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp EEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred EEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEE
Confidence 999875543333332334567889999655444443 22 678887775432 222221222236789999875544443
Q ss_pred eCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 320 FSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
.. ..+.|..+++.... ...+... ........+++. +..||++-...+.|..++..+++
T Consensus 558 D~--~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 558 DS--KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp ET--TTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCEEEEETTTEE
T ss_pred ec--CCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeEEEEEccCCC
Confidence 32 46789999987533 2222221 111223445554 34676777777899999887765
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.04 E-value=0.001 Score=60.14 Aligned_cols=212 Identities=7% Similarity=-0.040 Sum_probs=128.7
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc-cccCEEEEEE---eeCCCCEEEEEe---
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLW---HPTAQNVLLTAG--- 235 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~---~p~~~~~l~s~~--- 235 (490)
...---.+++|++..+.++++.-..++|..|+...+..... ..+.....+ ....+..+.| .|++. ++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~ 87 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAK 87 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccc
Confidence 34445568899886645555555789999999865543222 111000001 1124589999 58864 666443
Q ss_pred ----------CCCcEEEEECC---CCeeEEEEe--c-----------CCCcEEEEEEcCCCCEEEEEeCC-CeEEEEeCC
Q psy17682 236 ----------SDNNVAIWNVG---TGEIMIQIE--C-----------HPDIVYSASWNWDGSKLLTTCKD-KKMRIINPR 288 (490)
Q Consensus 236 ----------~dg~v~iwd~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~ 288 (490)
.+..|..+|+. +++.+.... . .......++..++|+..++++.. +.|..++..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 15779999998 787766554 1 12358899999999999999988 888888876
Q ss_pred CCceeeeee-e----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEecc---CCCceee-eeecC
Q psy17682 289 TGAIEEEAV-C----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVELD---TSNGVMF-PLYDP 358 (490)
Q Consensus 289 ~~~~~~~~~-~----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~~~---~~~~i~~-~~~s~ 358 (490)
... +..+. . ....-.+.++++|+|+.|++.. ..+.+..+|+..... +......+ ....... +.--.
T Consensus 168 G~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 168 GKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp SCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence 442 23222 1 1112267999999999888876 477888889884322 01111001 1112233 23334
Q ss_pred CCCeEEEEecCCCeEEEEEecC
Q psy17682 359 DTNLVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 359 ~~~~l~~~g~~dg~i~iwd~~~ 380 (490)
+|+.|+++....+.+.+.+...
T Consensus 244 ~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSST
T ss_pred CCEEEEEEcCCCCEEEEECCCC
Confidence 7777667766666655555444
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=0.0016 Score=62.94 Aligned_cols=243 Identities=11% Similarity=0.042 Sum_probs=133.1
Q ss_pred CeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE-------eeCCCCEEEEEeCCC
Q psy17682 167 PVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW-------HPTAQNVLLTAGSDN 238 (490)
Q Consensus 167 ~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~p~~~~~l~s~~~dg 238 (490)
....|+|+|. +++++++....+.|++.|++++........ -.........++| ++++. .|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~----~~~~~~~p~~ia~~~~~~~~d~~G~-~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI----NTIPTNRIRSIAFNKKIEGYADEAE-YMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC----TTSSCSBEEEEEECCCBTTTBCTTC-EEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc----CccccCCCcEEEEeecccccCCCCC-EEEEEeCCC
Confidence 5778999994 435555555557788899877655332211 0112235899999 99986 455554433
Q ss_pred -------cEEEEECCC-CeeE-----EEEecCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCC-------CCce-----
Q psy17682 239 -------NVAIWNVGT-GEIM-----IQIECHPDIVYSASWNWD-GSKLLTTCKDKKMRIINPR-------TGAI----- 292 (490)
Q Consensus 239 -------~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~----- 292 (490)
.|.+++... ++.. ..+... .....++++|+ +.++++-..++.|+.+|+. ++..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 266665433 2221 222211 23457888994 5556666678889999987 5543
Q ss_pred ------eee-eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC----CeEEEec-cCC------------
Q psy17682 293 ------EEE-AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DTS------------ 348 (490)
Q Consensus 293 ------~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~~------------ 348 (490)
... +..........++|+|+|..|..+.. ..+.|+.++...... +..+... ...
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f 371 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARM 371 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBC
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccccc
Confidence 112 22222334689999999995444432 466788765543221 1122211 000
Q ss_pred Ccee-eeeec-------CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee------------e--CC--------Ccee
Q psy17682 349 NGVM-FPLYD-------PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF------------Q--TP--------DPQR 398 (490)
Q Consensus 349 ~~i~-~~~~s-------~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~------------~--~~--------~~i~ 398 (490)
.... .++.. ++| .|+++-...+.|+.++ .++. +. .+... . .+ ....
T Consensus 372 ~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~-~~G~-v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~ 447 (496)
T 3kya_A 372 NNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVT-PEGI-VS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVS 447 (496)
T ss_dssp SSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEEC-TTCB-EE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEE
T ss_pred CCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEe-CCCC-EE-EEecccccccccCccccccCCCCchhhhhcCCCc
Confidence 1122 33443 344 4556777788999988 4442 22 22211 0 00 2356
Q ss_pred eEEEeeC-ceeEEeecceeEEEEe
Q psy17682 399 GIGMMPK-RGCDVNSCEIGRFFRL 421 (490)
Q Consensus 399 ~~~~sp~-~~~l~~~~~~~~~~~~ 421 (490)
+|+++++ +.+.++-...-||.++
T Consensus 448 gIavd~~~g~lyVaD~~N~rIrki 471 (496)
T 3kya_A 448 GLVYDDVKEMFYVHDQVGHTIRTI 471 (496)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCEEEEE
Confidence 7888886 7776766554344443
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.99 E-value=0.0023 Score=59.11 Aligned_cols=206 Identities=11% Similarity=-0.047 Sum_probs=113.8
Q ss_pred CCeeEEEECCCCCCEEEEE------------eCCCcEEEEECCCCC-cccccccceeeecccccCEEEEEEeeC--CCCE
Q psy17682 166 GPVLDIAWSPHDDNVIASG------------SEDCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNV 230 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~------------~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~ 230 (490)
.....+...|+| ..++++ ..+|.|.++|..+.. ....+......+....-....+.+.++ +...
T Consensus 50 ~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 345677788876 444443 168999999987432 112221000001112346778888773 4324
Q ss_pred EEEE-eC--CCcEEEEECCCC--e--eEEEEec-CCCcEEEEEEcCCCCEEEEEe-----------------CCCeEEEE
Q psy17682 231 LLTA-GS--DNNVAIWNVGTG--E--IMIQIEC-HPDIVYSASWNWDGSKLLTTC-----------------KDKKMRII 285 (490)
Q Consensus 231 l~s~-~~--dg~v~iwd~~~~--~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~iw 285 (490)
|+++ .. +..|.+|++..+ . .+..+.+ .-...+.+++.++|+++++.. ..|.|+-+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 4444 22 467788776543 2 2333332 234578999999998877754 12556666
Q ss_pred eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC-CCCeEE
Q psy17682 286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-DTNLVY 364 (490)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~ 364 (490)
|.. +.......- .....++|+||++.|..+.. ..+.|..|++...........+......-.+++++ +|++.+
T Consensus 209 d~~--~~~~~~~~l--~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 209 SPN--DVRVVAEGF--DFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp CTT--CCEEEEEEE--SSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred ECC--eEEEeecCC--cccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 653 322222222 23789999999987766542 46789999987433222222222334567788888 588763
Q ss_pred EEecCCCeEEEEEe
Q psy17682 365 LCGKGDSVIRYFEI 378 (490)
Q Consensus 365 ~~g~~dg~i~iwd~ 378 (490)
++.-..+.|..|+-
T Consensus 283 a~~~~g~~v~~~~P 296 (355)
T 3sre_A 283 GCHPNGMRIFFYDA 296 (355)
T ss_dssp EEESCHHHHHSCCT
T ss_pred EecCCceEEEEECC
Confidence 33322234444443
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.98 E-value=0.0025 Score=58.13 Aligned_cols=186 Identities=10% Similarity=0.119 Sum_probs=115.7
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC----CCC--EEEEEe-C--CCcEEEEECC--C
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT----AQN--VLLTAG-S--DNNVAIWNVG--T 247 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~--~l~s~~-~--dg~v~iwd~~--~ 247 (490)
.+++.....+-+.+||+ +++.+..+. .+.+..+..-|. ++. ++++.. . +++|++|++. +
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~---------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYN---------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEEC---------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEcc---------CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 56777777889999999 777766542 245666666552 211 223333 3 5789999773 3
Q ss_pred CeeEEEEec------CC-CcEEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC---C----CceeeeeeecCCCceeEEEE
Q psy17682 248 GEIMIQIEC------HP-DIVYSASW--NWD-GS-KLLTTCKDKKMRIINPR---T----GAIEEEAVCHEGSKATRAIY 309 (490)
Q Consensus 248 ~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~---~----~~~~~~~~~~~~~~~~~~~~ 309 (490)
++ +..+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. . .+.++++.... .+-.+..
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~Egcvv 187 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAA 187 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEE
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEE
Confidence 33 444421 11 45677887 774 44 67788889999999883 2 34556665433 4788888
Q ss_pred eCCCcEEEEEeCCCceeEEEEecCCCCC--CCeEEEeccCC---Cceeeeee--cCCCC-eEEEEecCCCeEEEEEecC
Q psy17682 310 LKSGLIFTTGFSKMSERQYSLRAPDHLD--EPIVMVELDTS---NGVMFPLY--DPDTN-LVYLCGKGDSVIRYFEITA 380 (490)
Q Consensus 310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~--~~~~~~~~~~~---~~i~~~~~--s~~~~-~l~~~g~~dg~i~iwd~~~ 380 (490)
.+....|..+- .+..|..++.+... ....+...... ..+..+++ .++++ +|++++-.+....+||...
T Consensus 188 Dd~~g~Lyv~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 188 DDEYGRLYIAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp ETTTTEEEEEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred cCCCCeEEEec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 88877777776 34446666644222 22233333221 24666666 56666 7877776788999999973
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.018 Score=57.91 Aligned_cols=225 Identities=9% Similarity=0.034 Sum_probs=138.3
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD 259 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 259 (490)
+|+-+ ....|+..++.+......+. +. .-..+..++|++.+..++++-..++.|..+++........+.....
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~-----~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIP-----LT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECC-----CC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEE-----cC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 34433 45689999987654322211 11 2346789999998765666666678999999875443333332234
Q ss_pred cEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCC
Q psy17682 260 IVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLD 337 (490)
Q Consensus 260 ~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~ 337 (490)
....+++.+.+. ++++-...+.|.+.++..... ..+....-.....+++.|. |.++.+-. +..+.|...+++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~--g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEW--GGKPKIDRAAMDGSE 157 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCS
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCC--CCCCEEEEEeCCCCc
Confidence 567899987655 445555678899999875443 2332222234789999985 65555432 135678888877544
Q ss_pred CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeE
Q psy17682 338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGR 417 (490)
Q Consensus 338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~ 417 (490)
. ..+. ........++++++++.||++-...+.|..+++..... +.+. .......++++..+ .+.++.-...+
T Consensus 158 ~-~~l~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~--~~l~~P~glav~~~-~ly~tD~~~~~ 229 (628)
T 4a0p_A 158 R-TTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIA--DDLPHPFGLTQYQD-YIYWTDWSRRS 229 (628)
T ss_dssp C-EEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEE--ECCSCEEEEEEETT-EEEEEETTTTE
T ss_pred e-EEEE--CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEee--ccCCCceEEEEECC-EEEEecCCCCE
Confidence 2 2222 23455788999999999988888889999999976542 2222 12223457887764 44455433334
Q ss_pred EEEec
Q psy17682 418 FFRLN 422 (490)
Q Consensus 418 ~~~~~ 422 (490)
++.++
T Consensus 230 I~~~d 234 (628)
T 4a0p_A 230 IERAN 234 (628)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.85 E-value=0.00017 Score=73.93 Aligned_cols=222 Identities=8% Similarity=-0.032 Sum_probs=122.8
Q ss_pred CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEE
Q psy17682 187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVY 262 (490)
Q Consensus 187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~ 262 (490)
.+.|+..++...+....+. ....+..++|.+.+..++++-...+.|+.+++.. ......+........
T Consensus 385 ~~~I~~id~~~~~~~~~~~--------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp TTC-CEECTTSCCEECCSC--------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred ccceEEEeCCCCcceeeec--------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 4577777776654433221 2335678899987653444444568899999875 222222221222345
Q ss_pred EEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682 263 SASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV 341 (490)
Q Consensus 263 ~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~ 341 (490)
.|++.+. ++++++-...+.|.++++...... .+..........++++|.+..|.... .+..+.|...++...... .
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~~~~P~giavDp~~g~ly~td-~~~~~~I~~~~~dG~~~~-~ 533 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQGSKPRAIVVDPVHGFMYWTD-WGTPAKIKKGGLNGVDIY-S 533 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EECCCSSCCCCCEECCSSSSCCEECC-CSSSCCEEBCCSSSCCCC-E
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EEEeCCCCCcceEEEccCCCcEEEcc-cCCCCeEEEEeCCCCCee-E
Confidence 6888864 455555556788999998755433 33222222367888998644443332 112367877777643321 2
Q ss_pred EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682 342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL 421 (490)
Q Consensus 342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~ 421 (490)
+.. ........++++|++..||++-+..+.|.++++.... ....+..........+|++..++ ++++.....+|+.+
T Consensus 534 l~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~~-lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 534 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDK-VFWTDIINEAIFSA 610 (699)
T ss_dssp ESC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETTE-EEEECSTTTCEEEE
T ss_pred EEe-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECCE-EEEEeCCCCeEEEE
Confidence 211 1223457899999988888888888899999987543 11122111111234567776653 44444333344444
Q ss_pred c
Q psy17682 422 N 422 (490)
Q Consensus 422 ~ 422 (490)
.
T Consensus 611 d 611 (699)
T 1n7d_A 611 N 611 (699)
T ss_dssp E
T ss_pred E
Confidence 3
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.85 E-value=0.017 Score=53.00 Aligned_cols=238 Identities=8% Similarity=0.027 Sum_probs=124.5
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
...+.+|.|.+ + ..++ ++.++.|.. ..+.++.-..... ...+...+..+.+.+++. +++++ .++.|.. .
T Consensus 79 ~~~~~~i~~~~-~-~~~~-~g~~g~i~~-S~DgG~tW~~~~~----~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~-S 147 (327)
T 2xbg_A 79 DYRFNSVSFQG-N-EGWI-VGEPPIMLH-TTDGGQSWSQIPL----DPKLPGSPRLIKALGNGS-AEMIT-NVGAIYR-T 147 (327)
T ss_dssp CCEEEEEEEET-T-EEEE-EEETTEEEE-ESSTTSSCEECCC----CTTCSSCEEEEEEEETTE-EEEEE-TTCCEEE-E
T ss_pred CccEEEEEecC-C-eEEE-EECCCeEEE-ECCCCCCceECcc----ccCCCCCeEEEEEECCCC-EEEEe-CCccEEE-E
Confidence 44688999986 3 4444 455664433 3333433222211 011234567788877763 55544 5565432 1
Q ss_pred CCCCeeEEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682 245 VGTGEIMIQI-ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM 323 (490)
Q Consensus 245 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 323 (490)
.+.++.-... ......+..+++.+++.+++.+...+..+-.|-. ++.-..+.......+..+.+.+++.+++++.
T Consensus 148 ~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~--- 223 (327)
T 2xbg_A 148 KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVN--- 223 (327)
T ss_dssp SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEEEEET---
T ss_pred cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEEEEeC---
Confidence 2234333322 2445678999999988877766544434444421 2211122212223478888999998887763
Q ss_pred ceeEEEEecCCCCCCCeEEEe--ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeE
Q psy17682 324 SERQYSLRAPDHLDEPIVMVE--LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGI 400 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~ 400 (490)
++.+.+.+.+.+..-..... ......+..+.+.+++..+ +++ .++.| ++....++.. ..+... ..+..+.++
T Consensus 224 -~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~-~~g-~~g~i-~~S~DgG~tW-~~~~~~~~~~~~~~~v 298 (327)
T 2xbg_A 224 -GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW-LAG-GAGAL-LCSQDGGQTW-QQDVDVKKVPSNFYKI 298 (327)
T ss_dssp -TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE-EEE-STTCE-EEESSTTSSC-EECGGGTTSSSCCCEE
T ss_pred -CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE-EEe-CCCeE-EEeCCCCccc-EEcCccCCCCCCeEEE
Confidence 56666653221110000000 1122357888898877765 555 36666 3444445422 222211 123467889
Q ss_pred EEeeCceeEEeecceeEEEEecC
Q psy17682 401 GMMPKRGCDVNSCEIGRFFRLNN 423 (490)
Q Consensus 401 ~~sp~~~~l~~~~~~~~~~~~~~ 423 (490)
.|.+++.+++.+. ...+++...
T Consensus 299 ~~~~~~~~~~~G~-~G~i~~~~~ 320 (327)
T 2xbg_A 299 LFFSPDQGFILGQ-KGILLRYVT 320 (327)
T ss_dssp EEEETTEEEEECS-TTEEEEECC
T ss_pred EEECCCceEEEcC-CceEEEEcC
Confidence 9987777655553 335666554
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.78 E-value=0.011 Score=54.57 Aligned_cols=188 Identities=11% Similarity=0.037 Sum_probs=111.2
Q ss_pred CEEEEEEeeCCCCEEEEEe-------------CCCcEEEEECCCCe-eEEEE--ec-----CCCcEEEEEEcC--CCC-E
Q psy17682 217 RVGLVLWHPTAQNVLLTAG-------------SDNNVAIWNVGTGE-IMIQI--EC-----HPDIVYSASWNW--DGS-K 272 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~-------------~dg~v~iwd~~~~~-~~~~~--~~-----~~~~v~~~~~~~--~~~-~ 272 (490)
....+...|+| ++++++ .+|.|.++|+.+.. ....+ .+ ..-....+.+.+ ++. +
T Consensus 51 G~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 34556666665 334443 68999999987421 12222 22 123567787766 454 4
Q ss_pred EEEEe-C--CCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCCCcEEEEEeC--------------CCceeEEEEe
Q psy17682 273 LLTTC-K--DKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKSGLIFTTGFS--------------KMSERQYSLR 331 (490)
Q Consensus 273 l~~~~-~--dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~--------------~~~~~~i~iw 331 (490)
|+++. . +.++.+|++.... .+.++.+..-.....+.+.++|.++++... ....+.+..+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 44443 3 4677787765432 223333333334789999999998877531 0123566666
Q ss_pred cCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEE
Q psy17682 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDV 410 (490)
Q Consensus 332 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~ 410 (490)
|.. +. ... ...-...+.++||||++.||++-+..+.|+.|++.....+ .....+.......+++..+ +|.+.+
T Consensus 209 d~~--~~-~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l-~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 209 SPN--DV-RVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp CTT--CC-EEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred ECC--eE-EEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE-ecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 653 21 111 1222446889999999999888888899999999753222 2222333345678888888 587666
Q ss_pred ee
Q psy17682 411 NS 412 (490)
Q Consensus 411 ~~ 412 (490)
+.
T Consensus 283 a~ 284 (355)
T 3sre_A 283 GC 284 (355)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.73 E-value=0.018 Score=57.84 Aligned_cols=229 Identities=7% Similarity=-0.066 Sum_probs=131.8
Q ss_pred CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682 134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY 213 (490)
Q Consensus 134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 213 (490)
.....|++.++.. ... ....+...-+.+..++|++.++.++++-...+.|..+++........+ +..
T Consensus 15 ~~~~~I~~i~~~~----~~~---~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v------~~~ 81 (619)
T 3s94_A 15 ANRRDLRLVDATN----GKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------VVS 81 (619)
T ss_dssp ECSSBEEEECCC----------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE------ECS
T ss_pred eccccEEEEeCCC----Ccc---eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE------EeC
Confidence 3456677777751 110 111122233567899999877455666556778988887654211111 111
Q ss_pred cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCc
Q psy17682 214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK--DKKMRIINPRTGA 291 (490)
Q Consensus 214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~ 291 (490)
.-.....+++.+.+.+++++-...+.|.+.++........+.........|++.|.+..|+.+.. .+.|...++....
T Consensus 82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS 161 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc
Confidence 22467899999976656666667789999998654332223234455778999997555555443 4677777766433
Q ss_pred eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682 292 IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS 371 (490)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg 371 (490)
...+..........+++++++..|..+.. ..+.|...|++......... ........+++..+ .||.+-...+
T Consensus 162 -~~~l~~~~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~--~ly~td~~~~ 234 (619)
T 3s94_A 162 -RFIIINSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED--ILYWTDWSTH 234 (619)
T ss_dssp -CEEEECSSCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTC
T ss_pred -eEEEEeCCCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC--EEEEecCCCC
Confidence 33332222334789999987555544432 46778888887533222111 11122345566544 6777777788
Q ss_pred eEEEEEecCCC
Q psy17682 372 VIRYFEITAEP 382 (490)
Q Consensus 372 ~i~iwd~~~~~ 382 (490)
.|...|..+++
T Consensus 235 ~V~~~d~~tg~ 245 (619)
T 3s94_A 235 SILACNKYTGE 245 (619)
T ss_dssp SEEEEESSSCC
T ss_pred EEEEEECCCCc
Confidence 89999987765
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.70 E-value=0.087 Score=56.89 Aligned_cols=252 Identities=11% Similarity=0.064 Sum_probs=137.0
Q ss_pred cCCeeEEEECCCC-----CCEEEEEeC-CCcEEEEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCC
Q psy17682 165 KGPVLDIAWSPHD-----DNVIASGSE-DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSD 237 (490)
Q Consensus 165 ~~~V~~~~~~p~~-----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~d 237 (490)
.+.|.|+++.|.. ..+++.|.. |++|+|+++.+.+.+.... +. ......++.+.. .+..+|..|-.|
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~-----L~-~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM-----LG-GEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE-----CC-SSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE-----CC-CCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 4689999998643 268999986 9999999998654433211 11 112334444332 233467888888
Q ss_pred CcEEEEECC--CCeeE--------------EEEecCCC-cE----------------------------EEEEEcCC--C
Q psy17682 238 NNVAIWNVG--TGEIM--------------IQIECHPD-IV----------------------------YSASWNWD--G 270 (490)
Q Consensus 238 g~v~iwd~~--~~~~~--------------~~~~~~~~-~v----------------------------~~~~~~~~--~ 270 (490)
|.+.-+.+. +++.. ..+..... .| ....|+.. .
T Consensus 627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~ 706 (1158)
T 3ei3_A 627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYP 706 (1158)
T ss_dssp SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSST
T ss_pred CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCC
Confidence 887655443 33221 11111100 00 01112211 1
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC---------------------------
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--------------------------- 323 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--------------------------- 323 (490)
.-++.. .++.++|..+...........+-+..+..++++|+.+.++.+..+.
T Consensus 707 ~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 707 DSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp TEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred CcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 123322 2345777666443322222222333478888988866554443100
Q ss_pred -------------------ceeEEEEecCCCCCCCeEEEeccCCCceeee---eecCCC-CeEEEEec----------CC
Q psy17682 324 -------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFP---LYDPDT-NLVYLCGK----------GD 370 (490)
Q Consensus 324 -------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~---~~s~~~-~~l~~~g~----------~d 370 (490)
....+++.|..+.+.. ....+.....+.++ .|..+. .++ +.|+ ..
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i-~~~~l~~nE~~~sv~~v~~~~~~~~~l-vVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQFLQNEYALSLVSCKLGKDPNTYF-IVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETTTCCEE-EEEECCTTEEEEEEEEECCTTCCCCEE-EEEEEECCTTCSSCCC
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCCCCeEE-EEEeCCCCcceEEEEEEEEccCCCEEE-EEEeeecCCCCCCCCc
Confidence 1234666776655422 22233333444444 444443 455 6664 35
Q ss_pred CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceE
Q psy17682 371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQ 428 (490)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~ 428 (490)
|.|++|++...+ .+.+......+++++++-- +|+++++-+..+++|++...+.++
T Consensus 864 Gri~vf~v~~~k--L~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 864 GRIVVFQYSDGK--LQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELR 918 (1158)
T ss_dssp EEEEEEEEETTE--EEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEE
T ss_pred eEEEEEEEECCE--EEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEE
Confidence 899999998543 4455555556788888754 457777778899999998765344
No 305
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.63 E-value=0.038 Score=50.77 Aligned_cols=243 Identities=9% Similarity=0.021 Sum_probs=127.9
Q ss_pred cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEE--eCC
Q psy17682 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTA--GSD 237 (490)
Q Consensus 163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~--~~d 237 (490)
..-...+.|+|.|+| .++++--..|.|++++..+++.......+ ............|+++|+ +..+.++- ..+
T Consensus 29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~-~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVP-GVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECT-TCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccC-ceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 334567899999998 67666655899999986555431110000 011224567899999995 32243332 234
Q ss_pred CcEEEEECCCC----------eeEE-EEe-cCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCc-
Q psy17682 238 NNVAIWNVGTG----------EIMI-QIE-CHPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTGA- 291 (490)
Q Consensus 238 g~v~iwd~~~~----------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~- 291 (490)
+.|.-|.+..+ +.+. .+. ...+.-..|+|.|||.++++.+. .|.|.-.+....-
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 55666665441 1222 222 11223457999999987777542 3555555654320
Q ss_pred ------eeeee-eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec--------CCCC-------CCCeEEEeccCC-
Q psy17682 292 ------IEEEA-VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA--------PDHL-------DEPIVMVELDTS- 348 (490)
Q Consensus 292 ------~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd--------~~~~-------~~~~~~~~~~~~- 348 (490)
....+ .++.+ ...++|+|+|.++++-........|.+.. ...+ ..+.. ...+.
T Consensus 187 ~~nPf~~~~i~a~G~RN--p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~--~~~~~~ 262 (347)
T 3das_A 187 PGNPFPGSPVYSYGHRN--VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVA--QWSTDE 262 (347)
T ss_dssp TTCSSTTCCEEEBCCSB--CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSE--EECTTT
T ss_pred CCCCCCCCeEEeeCCCC--cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcE--ecCCCC
Confidence 01111 14443 67899999988777543110112232211 1111 01111 11221
Q ss_pred CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeec
Q psy17682 349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~ 413 (490)
.....++|.. |.. |...-..+.|....+.......+....+. ....+++|+..|||.+.++.+
T Consensus 263 ~ap~G~~~~~-g~~-~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 263 ASPSGIAYAE-GSV-WMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CCEEEEEEET-TEE-EEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCcceEEEc-Cce-eeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 3456667763 443 35555566777677765431111011111 235789999999998877764
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.63 E-value=0.011 Score=54.03 Aligned_cols=191 Identities=9% Similarity=0.135 Sum_probs=114.7
Q ss_pred EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC----CCC--E-EEEEeC--CCcEEEEECC-CCC
Q psy17682 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH----DDN--V-IASGSE--DCVVKVWQIP-DGG 199 (490)
Q Consensus 130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~----~~~--~-l~s~~~--dg~i~iwd~~-~~~ 199 (490)
+......+.+.+|++. .+.++.+.. +.++.+..-|. |+. + +++.-. +++|++|++. ..+
T Consensus 43 ii~t~k~~gL~Vydl~---------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 43 LITTNKKSGLVVYSLD---------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp EEEEETTTEEEEEETT---------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred EEEEcCCCCEEEEcCC---------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 4444556789999985 223333332 56777776662 111 2 333333 5799999774 222
Q ss_pred cccccccceeeecccccCEEEEEE--eeC-CCCEEEEEeCCCcEEEEECC-------CCeeEEEEecCCCcEEEEEEcCC
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLW--HPT-AQNVLLTAGSDNNVAIWNVG-------TGEIMIQIECHPDIVYSASWNWD 269 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~--~p~-~~~~l~s~~~dg~v~iwd~~-------~~~~~~~~~~~~~~v~~~~~~~~ 269 (490)
.+..+..+...+......+..+++ +|. +..++++...+|.+..|++. +.+.++++. ..+.+..+...+.
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~ 190 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDE 190 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETT
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCC
Confidence 233332210000011145666777 664 43367778888999999883 335677777 4567899999998
Q ss_pred CCEEEEEeCCCeEEEEeCC-----CCceeeeee-ecCCCceeEEEEe--CCCc-EEEEEeCCCceeEEEEecCC
Q psy17682 270 GSKLLTTCKDKKMRIINPR-----TGAIEEEAV-CHEGSKATRAIYL--KSGL-IFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 270 ~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~-~~~~~~~~~~~~s--~~~~-~l~~~~~~~~~~~i~iwd~~ 334 (490)
...|+.+-++..|..+|.+ +++.+..+. ++-...+..+++- ++++ +|++++. .+..+.+||..
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ--G~~s~~Vydr~ 262 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ--GNSSYAIYDRQ 262 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESS
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC--CCCEEEEEECC
Confidence 8899999998888888865 233443332 2222236777764 4444 5555542 46789999986
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.56 E-value=0.088 Score=52.98 Aligned_cols=320 Identities=8% Similarity=-0.019 Sum_probs=174.3
Q ss_pred cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682 42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED 121 (490)
Q Consensus 42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 121 (490)
+.-..+..|+|++.+..++.+-..++.|..+++...... .....+ ......+++.+.
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~----------------~v~~~g-------~~~P~GlAvD~~ 90 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE----------------HVVEFG-------LDYPEGMAVDWL 90 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------EEECSS-------CSCCCEEEEETT
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----------------EEEeCC-------CCCcceEEEEeC
Confidence 334568899999987677777777889888888653310 010000 012345555443
Q ss_pred cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCC
Q psy17682 122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGG 199 (490)
Q Consensus 122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~ 199 (490)
. ..+.++-...+.|.+.++.... ..++ ...-....+|++.|.++.++++- +..+.|...++....
T Consensus 91 ~----~~LY~tD~~~~~I~v~~~dG~~---------~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 91 G----KNLYWADTGTNRIEVSKLDGQH---------RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE 157 (628)
T ss_dssp T----TEEEEEETTTTEEEEEETTSTT---------CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred C----CEEEEEECCCCEEEEEecCCCc---------EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence 2 1234445667888888875211 1122 23335578999998654555553 235677777765433
Q ss_pred cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD 279 (490)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 279 (490)
. ..+ ...-.....+++.+++..++++=...+.|..+|+..... ..+.........+++.. +..+++-...
T Consensus 158 ~-~~l-------~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 158 R-TTL-------VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp C-EEE-------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTT
T ss_pred e-EEE-------ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCC
Confidence 2 221 113456789999998764555555678899999865443 33443444566888864 4555555567
Q ss_pred CeEEEEeCCCCceeeeeeecCCC-----------------------ceeEEEE-eCCCc---------------------
Q psy17682 280 KKMRIINPRTGAIEEEAVCHEGS-----------------------KATRAIY-LKSGL--------------------- 314 (490)
Q Consensus 280 g~i~iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~-s~~~~--------------------- 314 (490)
+.|...|..+++....+...... ....++. .|.+.
T Consensus 228 ~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 228 RSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp TEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred CEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 88999997766543332211000 0000111 11111
Q ss_pred --EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-e
Q psy17682 315 --IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-F 391 (490)
Q Consensus 315 --~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~ 391 (490)
+|+.+. ...|+-..+.................+..+.|++.++.||.+=...+.|+.++..... ....+.. .
T Consensus 308 ~~~Ll~s~----~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~-~~~v~~~~~ 382 (628)
T 4a0p_A 308 TTFLLFSQ----KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQ-GFTVVVSSV 382 (628)
T ss_dssp SSEEEEEE----TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC---
T ss_pred cceeeeec----cceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCC-ceEEEEccc
Confidence 222221 2234333443222111122223334577899999888888877777888888776543 1222221 0
Q ss_pred ---eCCCceeeEEEeeCce-eEEee
Q psy17682 392 ---QTPDPQRGIGMMPKRG-CDVNS 412 (490)
Q Consensus 392 ---~~~~~i~~~~~sp~~~-~l~~~ 412 (490)
.......++++...+. +.++.
T Consensus 383 ~~~~~~~~p~glAvD~~~~nLY~td 407 (628)
T 4a0p_A 383 PSQNLEIQPYDLSIDIYSRYIYWTC 407 (628)
T ss_dssp -----CCCEEEEEEETTTTEEEEEE
T ss_pred ccccccCCcceEEeeccCCeEEEEc
Confidence 0123578899988754 43443
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.49 E-value=0.17 Score=54.64 Aligned_cols=172 Identities=11% Similarity=0.069 Sum_probs=96.9
Q ss_pred cEEEEECCCCeeEEEEec-CCCcEEEEEE---cCC-CCEEEEEe----------CCCeEEEEeCCCCceeeeeeecCCCc
Q psy17682 239 NVAIWNVGTGEIMIQIEC-HPDIVYSASW---NWD-GSKLLTTC----------KDKKMRIINPRTGAIEEEAVCHEGSK 303 (490)
Q Consensus 239 ~v~iwd~~~~~~~~~~~~-~~~~v~~~~~---~~~-~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~ 303 (490)
.|++.|..+.+.+..+.- ....+.+++. ..+ ..+|++|+ ..|.|++|++..++........-...
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 367777777776666552 2334555553 322 36888886 34789999987544332222222223
Q ss_pred eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
+++++-- +|++++ |- ...+++|++...+... ... .....+..+.....++++ +.|..-..|.++..+....
T Consensus 888 v~al~~~-~g~Lla-~i----g~~l~vy~l~~~~~L~-~~~-~~~~~i~~~~l~~~~~~I-~vgD~~~Sv~~~~y~~~~~ 958 (1158)
T 3ei3_A 888 VYSMVEF-NGKLLA-SI----NSTVRLYEWTTEKELR-TEC-NHYNNIMALYLKTKGDFI-LVGDLMRSVLLLAYKPMEG 958 (1158)
T ss_dssp EEEEEEE-TTEEEE-EE----TTEEEEEEECTTSCEE-EEE-EECCCSCEEEEEEETTEE-EEEESSBCEEEEEEETTTT
T ss_pred CEEEeee-CCEEEE-Ec----CCEEEEEECCCCceEE-EEe-eccccEEEEEEeccCCEE-EEEEhhheEEEEEEEcCCC
Confidence 6666533 465554 43 5689999998644222 111 111123322333356777 5677667788777765444
Q ss_pred eeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682 384 FVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFR 420 (490)
Q Consensus 384 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~ 420 (490)
....+..-..+..++++.|-.++.+++ ++...+++.
T Consensus 959 ~L~~~a~D~~~~~vta~~~ld~~t~l~-aD~~gNl~v 994 (1158)
T 3ei3_A 959 NFEEIARDFNPNWMSAVEILDDDNFLG-AENAFNLFV 994 (1158)
T ss_dssp EEEEEEECCSCBCEEEEEEEETTEEEE-EETTSEEEE
T ss_pred eEEEEEeecccccEEEEEEEccCcEEE-EcCCCcEEE
Confidence 444555444567889999988776544 444434443
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.46 E-value=0.089 Score=50.61 Aligned_cols=112 Identities=8% Similarity=0.070 Sum_probs=61.9
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee-ecccccCEEEEEEeeC---CCCEEEEEeC----
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD-LLYHQRRVGLVLWHPT---AQNVLLTAGS---- 236 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~---~~~~l~s~~~---- 236 (490)
-...++|+|.|+| +++++-...+.|++++..++........+... ..........|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3467799999998 66665443347888876545432111100000 0113467889999995 4334444332
Q ss_pred --------CCcEEEEECCCC-------eeEE-EEe-cCCCcEEEEEEcCCCCEEEEEe
Q psy17682 237 --------DNNVAIWNVGTG-------EIMI-QIE-CHPDIVYSASWNWDGSKLLTTC 277 (490)
Q Consensus 237 --------dg~v~iwd~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 277 (490)
...|.-++...+ +.+. .+. ...+....|+|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 134555554321 1122 122 1234578999999999777755
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.35 E-value=0.03 Score=50.71 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=111.0
Q ss_pred CEEEEEeC--CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----CcEEEEECCCCeeEE
Q psy17682 179 NVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----NNVAIWNVGTGEIMI 252 (490)
Q Consensus 179 ~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~v~iwd~~~~~~~~ 252 (490)
.+++.|+. ...+.+||..+++-...-..| ........+. -++ .+++.|+.+ ..+.+||+.+.+-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~--~~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-----EKRRDAACVF--WDN-VVYILGGSQLFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCS-----CCCBSCEEEE--ETT-EEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCC-----cccceeEEEE--ECC-EEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence 45556654 357888998766432211111 1111112222 244 477777754 678899998775332
Q ss_pred E--EecCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682 253 Q--IECHPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324 (490)
Q Consensus 253 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 324 (490)
. +.........+.+ ++++++.|+.+ ..+.+||..+.+-...-..... .....+..-++++++.|+....
T Consensus 85 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp EECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCEESC
T ss_pred CCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEECCEEEEECCCCCC
Confidence 2 2111111222222 56777777755 4589999987753322111111 1111122236777777753211
Q ss_pred ------eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeeeeeC
Q psy17682 325 ------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINTFQT 393 (490)
Q Consensus 325 ------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~~ 393 (490)
...+.+||+.+..- ...........-..++.. ++ .|++.|+.+ ..+.+||..+.+ ...+.....
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~ 236 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPW 236 (306)
T ss_dssp TTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSC
T ss_pred CCcccccceEEEeCCCCCeE-EECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCC
Confidence 35588888876531 111111111111122222 44 455666543 357888888764 223322222
Q ss_pred CCceeeEEEeeCceeEEeec-------ceeEEEEecCCC
Q psy17682 394 PDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNNSG 425 (490)
Q Consensus 394 ~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~~~ 425 (490)
...-.+++.. ++.+++.++ ..+..|++.+++
T Consensus 237 ~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 237 KGVTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CBSCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CccceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 1111222222 556666554 245667777666
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.35 E-value=0.036 Score=50.05 Aligned_cols=230 Identities=12% Similarity=0.091 Sum_probs=109.9
Q ss_pred CEEEEEe-CC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCC
Q psy17682 179 NVIASGS-ED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGT 247 (490)
Q Consensus 179 ~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~ 247 (490)
.+++.|+ .+ ..+.+||..+++-... .. +.........+. .++ .+++.|+.+ ..+.+||+.+
T Consensus 16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~----~p~~r~~~~~~~--~~~-~l~v~GG~~~~~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL-PS----ITRKRRYVASVS--LHD-RIYVIGGYDGRSRLSSVECLDYTA 87 (301)
T ss_dssp EEEEECCEETTTEECCCEEEEETTTTEEEEC-CC----CSSCCBSCEEEE--ETT-EEEEECCBCSSCBCCCEEEEETTC
T ss_pred EEEEEeCccCCCcceeEEEEEcCCCCeEEeC-CC----CChhhccccEEE--ECC-EEEEEcCCCCCccCceEEEEECCC
Confidence 4555555 22 3688889876643221 11 111111112222 244 477777754 4688999887
Q ss_pred Ce---eEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682 248 GE---IMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317 (490)
Q Consensus 248 ~~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 317 (490)
.+ -... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..... .....+...++++++
T Consensus 88 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 88 DEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAGLVVASGVIYC 164 (301)
T ss_dssp CTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCEEEEETTEEEE
T ss_pred CCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccceEEEECCEEEE
Confidence 65 2221 1111111222222 56777777643 3689999887654332221111 111222223677887
Q ss_pred EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeee
Q psy17682 318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINT 390 (490)
Q Consensus 318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~ 390 (490)
.|+.++. ...+.+||+.+..-. ..........-..++. -++ .|++.|+.+ ..+.+||+.+.+ ...+..
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~ 239 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWT-NVTPMATKRSGAGVAL-LND-HIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTS 239 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTTTE--EEEECC
T ss_pred ECCCCCCcccceEEEEeCCCCcEE-eCCCCCcccccceEEE-ECC-EEEEEeCCCCCcccceEEEEeCCCCc--EEECCC
Confidence 7763321 356888888764311 1111111111112222 234 455677654 468899988764 223322
Q ss_pred eeCCCceeeEEEeeCceeEEeec-------ceeEEEEecCCC
Q psy17682 391 FQTPDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNNSG 425 (490)
Q Consensus 391 ~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~~~ 425 (490)
......-.+++ .-++.+++.++ ..+.+|++.++.
T Consensus 240 ~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 240 MTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 22221112222 23566666553 244566666655
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.13 E-value=0.16 Score=46.92 Aligned_cols=145 Identities=9% Similarity=0.079 Sum_probs=81.6
Q ss_pred CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEe---cCCCcEEEEEEcCC---CCEEEEEeC-C-----CeE
Q psy17682 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIE---CHPDIVYSASWNWD---GSKLLTTCK-D-----KKM 282 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i 282 (490)
....++|.|+|. ++ .+..+|.|.+++ +++. +..+. ........++++|+ +..|.++.. . +.|
T Consensus 32 ~P~~ia~~pdG~-l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 32 VPWALAFLPDGG-ML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CEEEEEECTTSC-EE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CceEEEEcCCCe-EE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 467999999995 54 445679999998 4442 22221 12456899999998 444444433 2 678
Q ss_pred EEEeCCCCce-----e-eeeee--cCCCceeEEEEeCCCcEEEEEeCCC----------ceeEEEEecCCCC--------
Q psy17682 283 RIINPRTGAI-----E-EEAVC--HEGSKATRAIYLKSGLIFTTGFSKM----------SERQYSLRAPDHL-------- 336 (490)
Q Consensus 283 ~iwd~~~~~~-----~-~~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~----------~~~~i~iwd~~~~-------- 336 (490)
..++...+.. + ..+.. ........++|.|+|.++++-++.+ ..+.|..++.+..
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 8888764321 1 11221 1111246899999998777643211 1256666666531
Q ss_pred ----CCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682 337 ----DEPIVMVELDTSNGVMFPLYDPDTNLVYLCG 367 (490)
Q Consensus 337 ----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g 367 (490)
... .+....+ .....++|+|+...|+++-
T Consensus 188 ~~~~~~~-~i~a~G~-rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 188 GRRGARP-EVYSLGH-RNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TCTTSCT-TEEEECC-SEECCCEECTTTCCEEEEE
T ss_pred CCCCCCc-cEEEEcC-CCcccEEEECCCCCEEEEE
Confidence 011 1112122 3467889999433444543
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.04 E-value=0.2 Score=46.36 Aligned_cols=146 Identities=5% Similarity=-0.065 Sum_probs=81.8
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe---cCCCcEEEEEEcCC---CCEEEEEeC----C----C
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE---CHPDIVYSASWNWD---GSKLLTTCK----D----K 280 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----g 280 (490)
.....++|.|++. |+.+..+|.|++++. +++ .+..+. ........|+++|+ +..|.++.. + +
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3468999999984 555566799999973 454 222221 12356889999997 444444432 3 5
Q ss_pred eEEEEeCCCC--ce-----e-eeeeecCCCceeEEEEeCCCcEEEEEeCCC----------ceeEEEEecCCCCC---C-
Q psy17682 281 KMRIINPRTG--AI-----E-EEAVCHEGSKATRAIYLKSGLIFTTGFSKM----------SERQYSLRAPDHLD---E- 338 (490)
Q Consensus 281 ~i~iwd~~~~--~~-----~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~----------~~~~i~iwd~~~~~---~- 338 (490)
.|..|+.... .. + ..+..........++|.|+|.++++-++.+ ..+.|..++.+..- .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777876644 11 1 112211111256799999998777643211 12456666654320 0
Q ss_pred --CeEEEeccCCCceeeeeecC-CCCeEEEE
Q psy17682 339 --PIVMVELDTSNGVMFPLYDP-DTNLVYLC 366 (490)
Q Consensus 339 --~~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 366 (490)
...+....+ .....++|+| +|+.. ++
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~-v~ 214 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMV-AT 214 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEE-EE
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEE-EE
Confidence 011222222 3457899999 55544 44
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.00 E-value=0.18 Score=45.24 Aligned_cols=232 Identities=13% Similarity=0.117 Sum_probs=142.4
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT 203 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 203 (490)
++|.++.-..+.+..+.+.++.. .... .+ ..-...+.-.+|.. +.+|.-. ..+++++|+++.+.++.
T Consensus 36 DkyicVrE~~~~~~~VvIiDl~n----~~~~---~R----rpi~AdsAIMnP~~-~ViALra-g~~LQiFnletK~klks 102 (365)
T 2xzh_A 36 DKFICIREKVGEQAQVVIIDMND----PSNP---IR----RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA 102 (365)
T ss_dssp TTEEEEEEEETTEEEEEEEETTS----TTSC---EE----EECCCSEEEECSSS-SEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CceEEEEecCCCCCEEEEEECCC----CCCc---cc----cccccceeeeCCCc-cEEEEec-CCeEEEechHHhhhhcc
Confidence 56777777777777899999972 1111 11 11122234468866 6777665 57899999998877665
Q ss_pred cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682 204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVYSASWNWDGSKLLTTC- 277 (490)
Q Consensus 204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~- 277 (490)
.. ....|.-=.|-... .|+-.+. ..|+-|++.. ..+++.+..| ..+|..-..+++.+.++..+
T Consensus 103 ~~--------~~e~VvfWkWis~~--~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 103 HT--------MTDDVTFWKWISLN--TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EE--------CSSCEEEEEECSSS--EEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred ee--------cCCccEEEEecCCC--eEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 43 34567777777654 5555543 6799999974 3566666643 45677777888888766554
Q ss_pred ------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-----CcEEEEEeCCCceeEEEEecCCCC---CCCeE--
Q psy17682 278 ------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-----GLIFTTGFSKMSERQYSLRAPDHL---DEPIV-- 341 (490)
Q Consensus 278 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-----~~~l~~~~~~~~~~~i~iwd~~~~---~~~~~-- 341 (490)
-.|.+.+|..+.+ ..+.+.+|... . ..+-.+ ..+++.+......+.++|-++... ..+..
T Consensus 172 ~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~-F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk 247 (365)
T 2xzh_A 172 SAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-F--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 247 (365)
T ss_dssp EEETTEEEEEEEEEETTTT-EEEEECCSEEE-E--EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCE
T ss_pred eccCCccceeEEEEeeccc-ccceeeeeeee-e--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccc
Confidence 2367889998754 34455565432 2 222222 235555542223468999988543 11111
Q ss_pred EEe--ccC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 342 MVE--LDT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 342 ~~~--~~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
... +.. ..--.++..|+.-..+|+ -+.-|.|++||+.++..+
T Consensus 248 ~vdi~fppea~~DFPVamqvs~kygviyv-iTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 248 AVDVFFPPEAQNDFPVAMQISEKHDVVFL-ITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EEEECCCTTCTTCCEEEEEEETTTTEEEE-EETTSEEEEEETTTCCEE
T ss_pred cceeeCCccccCCceEEEEecccCCEEEE-EeCCcEEEEEEcccCcEE
Confidence 111 111 122456677777777754 457899999999999843
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.93 E-value=0.12 Score=48.27 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=90.8
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC---CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC---C--
Q psy17682 267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE---GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD---E-- 338 (490)
Q Consensus 267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~---~-- 338 (490)
..+|..++.+- ++.||.-++......+.+.... -..+..+..+|+|.+||..+ +..|.|-.+.... .
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCCH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccccCccc
Confidence 33555555544 4778888877554445554331 21478899999999999986 6677777666221 1
Q ss_pred ----CeE--EEecc-----CCCceeeeeecCCCC---eEEEEecCCCeEEEEEecCCCCeeEEee----eee---CCCce
Q psy17682 339 ----PIV--MVELD-----TSNGVMFPLYDPDTN---LVYLCGKGDSVIRYFEITAEPPFVHYIN----TFQ---TPDPQ 397 (490)
Q Consensus 339 ----~~~--~~~~~-----~~~~i~~~~~s~~~~---~l~~~g~~dg~i~iwd~~~~~~~~~~~~----~~~---~~~~i 397 (490)
+.. ....+ ....|..+.|+|-+. .| ++-..|+.|++||+.........+. .+. ....|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L-VVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI-VVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE-EEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE-EEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 011 11222 246699999999653 45 5567899999999986321111221 111 11457
Q ss_pred eeEEEeeCceeEEe--ecceeEEEEecC
Q psy17682 398 RGIGMMPKRGCDVN--SCEIGRFFRLNN 423 (490)
Q Consensus 398 ~~~~~sp~~~~l~~--~~~~~~~~~~~~ 423 (490)
.+++|.+++-.|.. ..+.+.+|-+..
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlcP 210 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAFYP 210 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence 88999997654444 335555666554
No 316
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.85 E-value=0.36 Score=46.33 Aligned_cols=252 Identities=8% Similarity=-0.002 Sum_probs=123.2
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC---cccccccceee--ecccccCEEEEEEeeC---CCCEEEEEeC-
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG---ISRTLTEPVVD--LLYHQRRVGLVLWHPT---AQNVLLTAGS- 236 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~--~~~~~~~v~~~~~~p~---~~~~l~s~~~- 236 (490)
..-+.|+|.|+|...++++...|.|++++..... .+..+...... ..........|+|+|+ ...+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567999999984245556788999999743221 11111110000 0012467889999996 2224443322
Q ss_pred -C----------CcEEEEECCC----------CeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCC--------------
Q psy17682 237 -D----------NNVAIWNVGT----------GEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKD-------------- 279 (490)
Q Consensus 237 -d----------g~v~iwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-------------- 279 (490)
+ ..|.-|.+.. .+.+..+. ........|+|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 1344455532 12333332 223446899999999877776543
Q ss_pred ---CeEEEEeCCCC------c-------------eeeee-eecCCCceeEEEEeCC-----CcEEEEEeCC-Cce-eEEE
Q psy17682 280 ---KKMRIINPRTG------A-------------IEEEA-VCHEGSKATRAIYLKS-----GLIFTTGFSK-MSE-RQYS 329 (490)
Q Consensus 280 ---g~i~iwd~~~~------~-------------~~~~~-~~~~~~~~~~~~~s~~-----~~~l~~~~~~-~~~-~~i~ 329 (490)
|.|.-.|.... . ....+ .+|.+ ...++|.|. |.+.+.+++. +.+ ..-.
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN--p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e 251 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD--PGRCAVDRHPTDININLTILCSDSNGKNRSSAR 251 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS--CCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC--cceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence 23444454431 0 00111 14443 678899997 4433323321 111 0112
Q ss_pred EecCCCCC-----CCeEEEeccCC--CceeeeeecC-------CCCeEEEEecCCCeEEEEEecCCCCeeE--Ee-ee--
Q psy17682 330 LRAPDHLD-----EPIVMVELDTS--NGVMFPLYDP-------DTNLVYLCGKGDSVIRYFEITAEPPFVH--YI-NT-- 390 (490)
Q Consensus 330 iwd~~~~~-----~~~~~~~~~~~--~~i~~~~~s~-------~~~~l~~~g~~dg~i~iwd~~~~~~~~~--~~-~~-- 390 (490)
|..+..+. .+. ....+. ..+..+.|-. .|.++ + +...+.|....+........ .+ ..
T Consensus 252 i~~i~~G~~yG~~~P~--~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~ 327 (463)
T 2wg3_C 252 ILQIIKGKDYESEPSL--LEFKPFSNGPLVGGFVYRGCQSERLYGSYV-F-GDRNGNFLTLQQSPVTKQWQEKPLCLGTS 327 (463)
T ss_dssp EEEEC----CCSCCCC--EECCC----CEEEEEECCCSSCTTTTTCEE-E-EETTSCEEEEEC-----CCEEEEECEEET
T ss_pred EeeeccCCCCCCCCCe--EEeeCCCCccccceEEEeCCCChhhcceEE-E-ecCCCcEEEEEeCCCCceeeEEEeecCCc
Confidence 22222111 222 222333 3566666632 23455 3 33346665555544322111 11 00
Q ss_pred ----eeCCCceeeEEEeeCceeEEeec-------ceeEEEEecC
Q psy17682 391 ----FQTPDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNN 423 (490)
Q Consensus 391 ----~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~ 423 (490)
......+.++++.|||.+.++.+ ...+||++..
T Consensus 328 ~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~ 371 (463)
T 2wg3_C 328 GSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD 371 (463)
T ss_dssp TSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred ccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence 01124689999999998888775 4678999874
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.75 E-value=0.085 Score=47.78 Aligned_cols=230 Identities=10% Similarity=0.044 Sum_probs=107.0
Q ss_pred CEEEEEeCC----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC----C-----CcEEEEEC
Q psy17682 179 NVIASGSED----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS----D-----NNVAIWNV 245 (490)
Q Consensus 179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----d-----g~v~iwd~ 245 (490)
.+++.|+.+ ..+.+||..+++-...-..|. ....| +++.. ++ .+++.|+. + ..+.+||+
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~-----~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQV-PRSGL-----AGCVV-GG-LLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSS-CCBSC-----EEEEE-TT-EEEEECCEEEETTEEEECCCEEEEET
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCc-ccccc-----eEEEE-CC-EEEEECCCcCCCCCCeecceEEEECC
Confidence 566666532 368888887664322111110 01111 12222 44 47777765 2 46888998
Q ss_pred CCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682 246 GTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 246 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 318 (490)
.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-.......-..++. -++++++.
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~ 174 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAV 174 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEE
T ss_pred CCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-ECCEEEEE
Confidence 87653221 1111111222223 56777776643 458899998765332211111110112222 26777777
Q ss_pred EeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeeee
Q psy17682 319 GFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINTF 391 (490)
Q Consensus 319 ~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~~ 391 (490)
|+.++. ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.+ ..+.+||+.+.+ ...+...
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~ 249 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVETET--WTFVAPM 249 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTTTE--EEECCCC
T ss_pred eCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE-CC-EEEEEeCCCCCCccceEEEEeCCCCc--EEECCCC
Confidence 763322 356888888764311 11111111111122222 34 455677654 468899988764 2233222
Q ss_pred eCCCceeeEEEeeCceeEEeecc-------eeEEEEecCCC
Q psy17682 392 QTPDPQRGIGMMPKRGCDVNSCE-------IGRFFRLNNSG 425 (490)
Q Consensus 392 ~~~~~i~~~~~sp~~~~l~~~~~-------~~~~~~~~~~~ 425 (490)
.....-.+++.. ++.+++.++. .+.+|++.++.
T Consensus 250 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 250 KHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 222112233333 5566555532 34456666554
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.68 E-value=0.42 Score=44.78 Aligned_cols=234 Identities=12% Similarity=0.106 Sum_probs=143.9
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT 203 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 203 (490)
++|.++.-..+.+..+.|.++.. .... . ...-...+.-.+|.. +.+|.=. ..++.|+|+++...++.
T Consensus 35 DkyicVrE~~~~~~~vvIiDl~~----~~~~---~----rrpi~AdsAIMnP~~-~iiALra-g~~lQiFnle~K~klks 101 (494)
T 1bpo_A 35 DKFICIREKVGEQAQVVIIDMND----PSNP---I----RRPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA 101 (494)
T ss_dssp TTEEEEEECCTTCCEEEEEETTS----TTSC---E----EEECCCSEEEECSSS-SCEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CceEEEEecCCCCCeEEEEECCC----CCcc---e----ecccccceeeeCCCC-cEEEEec-CCeEEEEchHHhhhhcc
Confidence 56777777677777899999962 1111 0 111123345578866 6666655 57999999998877665
Q ss_pred cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682 204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVYSASWNWDGSKLLTTC- 277 (490)
Q Consensus 204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~- 277 (490)
.. ....|.-=.|-... .|+-.+ +..|+-|++.. ..++..+..| ...|..-..+++.+.++..+
T Consensus 102 ~~--------~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 102 HT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp EE--------CSSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred ee--------cCCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 43 34567677777664 455554 46899999974 3566666643 45677777888888776544
Q ss_pred ------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCC---CCCe--EEE
Q psy17682 278 ------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHL---DEPI--VMV 343 (490)
Q Consensus 278 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~---~~~~--~~~ 343 (490)
-.|.+.+|..+.+. .+.+.+|... ...+....+ ..+++.+......+.++|.++... ..+. ...
T Consensus 171 ~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~v 248 (494)
T 1bpo_A 171 SAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV 248 (494)
T ss_dssp EEETTEEEEEEEEEESTTCC-EEEECCSEEE-EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEE
T ss_pred cccCCcccceEEEeeccccc-cchheeeeee-eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceee
Confidence 24678999987553 3455566532 222222211 235555553333478999888643 1111 111
Q ss_pred ec--cC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 344 EL--DT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 344 ~~--~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
.. .. ..--.++..|+.-..+|+ -+.-|.|.+||+.++..+
T Consensus 249 dv~fppe~~~DFPvamqvs~kygviyv-iTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 249 DVFFPPEAQNDFPVAMQISEKHDVVFL-ITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp ECCCCTTSTTCCEEEEEEETTTTEEEE-EETTSEEEEEETTTCCEE
T ss_pred eeeCCcccccCceeEEEecccCCEEEE-EecCceEEEEecccceee
Confidence 11 11 122456777887777754 567899999999999843
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.67 E-value=0.38 Score=44.09 Aligned_cols=259 Identities=14% Similarity=0.120 Sum_probs=127.5
Q ss_pred ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682 39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI 118 (490)
Q Consensus 39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (490)
.+...-..-..|+|.|++ .++++--..|.|++++..++... ....+.. -..........+++
T Consensus 26 ~va~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~----------------~v~~~~~-v~~~g~~GllGia~ 87 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKT----------------ELGEVPG-VSPSGEGGLLGIAL 87 (347)
T ss_dssp EEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE----------------EEEECTT-CCCBTTBSEEEEEE
T ss_pred EeecCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEe----------------eecccCc-eeecCCCCceeeEe
Confidence 444556677899999999 77776655899998876554310 0000000 00111224567899
Q ss_pred ccccc-cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee----cccCCeeEEEECCCCCCEEEEEeC-------
Q psy17682 119 SEDYV-KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG----GHKGPVLDIAWSPHDDNVIASGSE------- 186 (490)
Q Consensus 119 s~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~~~~~p~~~~~l~s~~~------- 186 (490)
+|++. ...+-+..+....+.|.-+.+........+.......+. +....-..|.|.|+| .+.++.+.
T Consensus 88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLS 166 (347)
T ss_dssp CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGT
T ss_pred ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccc
Confidence 98753 122222223345566776766531111011111111111 112235679999998 56665432
Q ss_pred ------CCcEEEEECCCCCcccc--cccceeeecccccCEEEEEEeeCCCCEEEEE-eCCCcEEEEECCCCe--------
Q psy17682 187 ------DCVVKVWQIPDGGISRT--LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA-GSDNNVAIWNVGTGE-------- 249 (490)
Q Consensus 187 ------dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~v~iwd~~~~~-------- 249 (490)
.|.|.-.+.. ++.... +........+|. ....++|+|++. ++++= +.|+.-.|--+..+.
T Consensus 167 qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~ 243 (347)
T 3das_A 167 QDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAE 243 (347)
T ss_dssp TCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCC
T ss_pred cCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCccc
Confidence 2444444432 221000 000011122343 456899999875 44332 223222222222221
Q ss_pred ----------eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---eeeeecCCCceeEEEEeCCCcEE
Q psy17682 250 ----------IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE---EEAVCHEGSKATRAIYLKSGLIF 316 (490)
Q Consensus 250 ----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l 316 (490)
++..+..+......++|. ++..++..-..+.|....+...... ..+.......+..++..|||.++
T Consensus 244 g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ly 322 (347)
T 3das_A 244 GKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLW 322 (347)
T ss_dssp SSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEE
T ss_pred CCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEE
Confidence 233333222356677776 4566666556666766666544321 11211122358899999999877
Q ss_pred EEEe
Q psy17682 317 TTGF 320 (490)
Q Consensus 317 ~~~~ 320 (490)
++..
T Consensus 323 v~td 326 (347)
T 3das_A 323 LVTS 326 (347)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7654
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.62 E-value=0.13 Score=46.36 Aligned_cols=190 Identities=10% Similarity=0.068 Sum_probs=93.5
Q ss_pred CEEEEEeCC-----CcEEEEECCCCC---cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEEC
Q psy17682 179 NVIASGSED-----CVVKVWQIPDGG---ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNV 245 (490)
Q Consensus 179 ~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~ 245 (490)
.+++.|+.+ ..+.+||..+++ -... .. +.........+.. ++ .+++.|+.+ ..+.+||+
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~----~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-AP----MNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CC----CSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEET
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CC----CCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcC
Confidence 566666654 468899987765 2221 11 1111111122222 44 477777654 35889998
Q ss_pred CCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682 246 GTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 246 ~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 318 (490)
.+.+-.. .+.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..... .....+..-++++++.
T Consensus 136 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~ 212 (301)
T 2vpj_A 136 NIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK-RSGAGVALLNDHIYVV 212 (301)
T ss_dssp TTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEE
T ss_pred CCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc-cccceEEEECCEEEEE
Confidence 8765322 22211111222222 57777777654 4589999987654322111111 1111222236777777
Q ss_pred EeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682 319 GFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP 382 (490)
Q Consensus 319 ~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~ 382 (490)
|+.+.. ...+.+||+.+..- ...........-..++. -+++ |++.|+.+ ..+.+||..+.+
T Consensus 213 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATV-LRGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eCCCCCcccceEEEEeCCCCcE-EECCCCCCcccceeEEE-ECCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 763321 35688899876431 11111111111112222 2444 44666654 357778877653
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.50 E-value=0.22 Score=44.77 Aligned_cols=150 Identities=12% Similarity=0.104 Sum_probs=74.9
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcee
Q psy17682 226 TAQNVLLTAGSD-----NNVAIWNVGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIE 293 (490)
Q Consensus 226 ~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~ 293 (490)
++ .+++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.++ .+.+||+.+.+-.
T Consensus 61 ~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AG-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TT-EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CC-EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 44 477777754 3588999887653222 1111111222222 567777777553 5888998876533
Q ss_pred eeeeecCCCceeEEEEeCCCcEEEEEeCCCc----eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC
Q psy17682 294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS----ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG 369 (490)
Q Consensus 294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~----~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~ 369 (490)
..-..... .....+..-++++++.|+.+.. ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.
T Consensus 138 ~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMNTR-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMSTRRSGAGVGVL-NN-LLYAVGGH 213 (302)
T ss_dssp EECCCSSC-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE-TT-EEEEECCB
T ss_pred ecCCCCCc-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCccccccccEEEE-CC-EEEEECCC
Confidence 22111111 1111122236777777753221 345788888764311 11111111111122221 34 45567765
Q ss_pred C-----CeEEEEEecCCC
Q psy17682 370 D-----SVIRYFEITAEP 382 (490)
Q Consensus 370 d-----g~i~iwd~~~~~ 382 (490)
+ ..+.+||..+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp SSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCC
Confidence 4 368889988764
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.40 E-value=0.3 Score=44.23 Aligned_cols=188 Identities=8% Similarity=0.037 Sum_probs=89.2
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-----C------CcEEEEECCCC
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----D------NNVAIWNVGTG 248 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----d------g~v~iwd~~~~ 248 (490)
+++.|+ ..+.+||..+++-.. .. +.....+........++ .+++.|+. . ..+.+||..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~-----~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 77 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-AS-----LSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS 77 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EE-----CCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred EEEEcC--CceEEECCCCCeEec-CC-----CCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCC
Confidence 455555 468899987765321 11 11111122222223355 47788873 1 12778898876
Q ss_pred eeEEEEecCCCcE--EEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682 249 EIMIQIECHPDIV--YSASWNWDGSKLLTTCKD--------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT 318 (490)
Q Consensus 249 ~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 318 (490)
+-. .+.....+- .+++.. +++.++.|+.+ ..+.+||..+.+-...-..... .....+...++++++.
T Consensus 78 ~W~-~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~ 154 (315)
T 4asc_A 78 EWL-GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTVLSHMDLVYVI 154 (315)
T ss_dssp EEE-ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEE
T ss_pred eEE-ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeEEEECCEEEEE
Confidence 532 222111111 112222 56677777632 4589999987653221111111 1222223346777777
Q ss_pred EeC-CC--ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-----eEEEEEecCCC
Q psy17682 319 GFS-KM--SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-----VIRYFEITAEP 382 (490)
Q Consensus 319 ~~~-~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-----~i~iwd~~~~~ 382 (490)
|+. .. ....+.+||+.+..-. ..........-..++. -++ .|++.|+.++ .+.+||..+.+
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATV-HDG-RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred eCCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEE-ECC-EEEEEeccCCCCccceEEEEECCCCe
Confidence 763 11 1356888888764310 1111111111112222 244 4456666543 57788887763
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.40 E-value=0.14 Score=43.16 Aligned_cols=183 Identities=10% Similarity=-0.000 Sum_probs=98.5
Q ss_pred CEEEEEeCCCcEEEEECCCCe------eEEEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-----eee
Q psy17682 229 NVLLTAGSDNNVAIWNVGTGE------IMIQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE-----EEA 296 (490)
Q Consensus 229 ~~l~s~~~dg~v~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~ 296 (490)
.+|+....| +++.=...++. ...++-. .=..+..++|+|+|.+.++ .+|.++-.+..+.... .+.
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 366777777 65554443332 1222221 1246779999999987777 6788888887553211 111
Q ss_pred eecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-----EEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682 297 VCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-----VMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370 (490)
Q Consensus 297 ~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d 370 (490)
.+..+ .....+.|.|+|.+.++ + ++.|+-++..+..... .......-..+..+.|.|+|.+. +.. |
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav-~----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly-av~--d 153 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV-S----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLY-AVH--G 153 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE-E----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEE-EEE--T
T ss_pred ecccccccceEEEECCCCCEEEe-C----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEE-EEe--C
Confidence 11111 11478899999999888 4 5788777753322111 11110111357899999999876 444 6
Q ss_pred CeEEEEEecCCC--CeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682 371 SVIRYFEITAEP--PFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS 424 (490)
Q Consensus 371 g~i~iwd~~~~~--~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~ 424 (490)
+.++-....++. ........+. .-...+.+.|.|++.+.+.. ..++|.....
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEESCC
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEEecCCc
Confidence 764432222111 0000011111 11234557788888776665 4467766443
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.28 E-value=0.17 Score=42.66 Aligned_cols=185 Identities=9% Similarity=0.052 Sum_probs=96.2
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeeccc--ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee------
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYH--QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI------ 250 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~------ 250 (490)
.+|+...+| +++.=....+.. ..+......+ ++ =..+..++|+|++. +.++ .+|.+.-.+..+.+.
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~i-G~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKN-DNWLARATLI-GKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTT-CCHHHHSEEE-ESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred eEEEEEeCC-cEEecCCCCCcc-cchhhhcccc-CccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCccccccc
Confidence 677777777 655544444332 1110011111 12 23677999999884 5555 667777666544211
Q ss_pred EEEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-----eeeec-CCCceeEEEEeCCCcEEEEEeCCC
Q psy17682 251 MIQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE-----EAVCH-EGSKATRAIYLKSGLIFTTGFSKM 323 (490)
Q Consensus 251 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~-~~~~~~~~~~s~~~~~l~~~~~~~ 323 (490)
-..+-. .-....++.|.|+|.+.++ .||.|+-++-.+..... +..+. .-..+..+.+.|+|.+.++..
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~d--- 153 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHG--- 153 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEET---
T ss_pred ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEeC---
Confidence 111210 0111468899999998887 56999888864322111 11111 112378999999999988772
Q ss_pred ceeEEEEecCCCCCCC-----eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 324 SERQYSLRAPDHLDEP-----IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 324 ~~~~i~iwd~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
+.++-+........ ........-.....+.|++++....+. ++ ++|.....
T Consensus 154 --g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~---~g--~~Y~~~~p 209 (236)
T 1tl2_A 154 --QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ---GG--KFYEDYPP 209 (236)
T ss_dssp --TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE---TT--EEEEESCC
T ss_pred --CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe---CC--eEEecCCc
Confidence 23332222211100 011111112234556789998877443 66 45555443
No 325
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.38 Score=43.92 Aligned_cols=192 Identities=9% Similarity=0.011 Sum_probs=104.5
Q ss_pred CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE--eeCCCCEEEEE-eCCCcEEEEECCCCeeEEEEe
Q psy17682 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW--HPTAQNVLLTA-GSDNNVAIWNVGTGEIMIQIE 255 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~ 255 (490)
.+++.++.||.|.-.|..+|+....+... ...++....- .+.+...++.. ..||.|..++..+|.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~------~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE------NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG------GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC------ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence 47888999999999999999887765432 0011111100 01122233333 579999999998886554443
Q ss_pred c----CCCcEEE---EEE-c----CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc------eeEEEEe-----CC
Q psy17682 256 C----HPDIVYS---ASW-N----WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK------ATRAIYL-----KS 312 (490)
Q Consensus 256 ~----~~~~v~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~s-----~~ 312 (490)
. ...++.. ... . ..+..+++|+.+|.+...|+++|+.+.++....... ..+.... ..
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~ 164 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC 164 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccC
Confidence 1 2222221 000 0 135678899999999999999999998886321100 0111110 11
Q ss_pred CcEEEEEeCCCceeEEEEecCCCCCCCeE--EEeccCCCc---e-eeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682 313 GLIFTTGFSKMSERQYSLRAPDHLDEPIV--MVELDTSNG---V-MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP 383 (490)
Q Consensus 313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~---i-~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~ 383 (490)
+..+..+. .+..+.+.+ +++. ... ......... + .....+.|+.++ + ++.||.|.-+|..+++.
T Consensus 165 ~~~v~ig~---~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~-~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 165 ENMIVIGK---TIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-A-PFRDKSLLASDLDFRIA 234 (339)
T ss_dssp CCEEEEEE---EEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-E-EETTTEEEEECSTTCCE
T ss_pred CCeEEEec---ceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-E-ECCCCEEEEEECCCCcE
Confidence 34455555 467777766 3332 111 111111000 0 011123456665 3 67899999999888873
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.25 E-value=0.28 Score=44.20 Aligned_cols=189 Identities=10% Similarity=0.042 Sum_probs=92.2
Q ss_pred CEEEEEeCC----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC------CcEEEEECCCC
Q psy17682 179 NVIASGSED----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIWNVGTG 248 (490)
Q Consensus 179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iwd~~~~ 248 (490)
.+++.|+.+ ..+.+||..+++-...-. +.........+.+ ++ .+++.|+.+ ..+.+||..+.
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-----PPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEEC-----CSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCC-----CCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 566666654 568888987664322111 1111111122222 44 477777765 46889999877
Q ss_pred eeEEE--EecCCCcEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682 249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCK---------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317 (490)
Q Consensus 249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 317 (490)
+-... +.........+.+ ++++++.|+. -..+.+||+.+.+-...-..... .....+..-++++++
T Consensus 129 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 129 SWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA-RKNHGLVFVKDKIFA 205 (306)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEE
T ss_pred ceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch-hhcceEEEECCEEEE
Confidence 53222 1111111122222 5667777653 34588999987753322111111 111122222677777
Q ss_pred EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCC-ceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682 318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSN-GVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP 382 (490)
Q Consensus 318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~ 382 (490)
.|+.+.. ...+.+||+.+..- .......... ....+.+ ++ .|++.|+.+ ..+.+||..+.+
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNEW-KMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTEE-EECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EeCCCCCCCCceEEEeeCCCCcE-EECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 7753211 24578888876431 1111111111 1122222 34 455677644 467888887764
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.20 E-value=0.39 Score=44.92 Aligned_cols=117 Identities=10% Similarity=0.167 Sum_probs=78.7
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc-------cccceeeecc----cccCEEEEEEeeCCCC--EEEE
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT-------LTEPVVDLLY----HQRRVGLVLWHPTAQN--VLLT 233 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~~~----~~~~v~~~~~~p~~~~--~l~s 233 (490)
.|..+..+|+| ++||..+. ..|.|-.+..+..... +......+.. ...+|..+.|||-+.+ .|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 57889999998 78888764 5899999984431111 1100011111 2567999999997533 8899
Q ss_pred EeCCCcEEEEECCCC--eeEEEEe---------cCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEe
Q psy17682 234 AGSDNNVAIWNVGTG--EIMIQIE---------CHPDIVYSASWNWDGSKLLTTC--KDKKMRIIN 286 (490)
Q Consensus 234 ~~~dg~v~iwd~~~~--~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd 286 (490)
-..|+.|++||+... ++. .++ .....|.+++|.+++-.|...+ .+|.|+-.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 999999999999852 233 332 2235688999999876666655 778877653
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.18 E-value=1 Score=48.99 Aligned_cols=234 Identities=12% Similarity=0.079 Sum_probs=135.3
Q ss_pred cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682 124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT 203 (490)
Q Consensus 124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 203 (490)
++|.++.-..+....+.|.++.. .... ..+. -..-+.-.+|.. +.+|.=. ..++.|+|+++...++.
T Consensus 35 Dkyicvre~~~~~~~vvIidl~~----~~~~--~rrp-----i~AdsAIMnP~~-~iiALra-g~~lQiFnl~~k~klks 101 (1630)
T 1xi4_A 35 DKFICIREKVGEQAQVVIIDMND----PSNP--IRRP-----ISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA 101 (1630)
T ss_pred CceEEEEecCCCCceEEEEECCC----CCCc--cccc-----ccchhhccCCCc-ceEEEec-CCeEEEeehHHhhhhcc
Confidence 56677766666777899999872 2111 0011 112233467765 5666554 67999999988877665
Q ss_pred cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682 204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVYSASWNWDGSKLLTTC- 277 (490)
Q Consensus 204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~- 277 (490)
.. ....|.-=.|-... .|+-.+ +..|.-|++.. ..++..+..| ...|..-..+++.+.++..+
T Consensus 102 ~~--------~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 102 HT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred cc--------cCCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence 43 34456666776554 455443 35799999964 2444444433 45677777788888766544
Q ss_pred ------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEe---CCCcEEEEEeCCCceeEEEEecCCCC---CCCeEEE--
Q psy17682 278 ------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL---KSGLIFTTGFSKMSERQYSLRAPDHL---DEPIVMV-- 343 (490)
Q Consensus 278 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~l~~~~~~~~~~~i~iwd~~~~---~~~~~~~-- 343 (490)
-.|.+.+|++..+. .+.+.+|... ....... +...+++.+......+.++|-++... ..+....
T Consensus 171 ~~~~~~v~G~mQLyS~er~~-sQ~iegha~~-F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~ 248 (1630)
T 1xi4_A 171 SAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV 248 (1630)
T ss_pred ccCCCcccceeeeeeccccc-chhhhHhHhh-hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccc
Confidence 34788899887543 3344455543 2222221 11335554442223467888887543 1111111
Q ss_pred --eccC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682 344 --ELDT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF 384 (490)
Q Consensus 344 --~~~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~ 384 (490)
.+.. ..-..++..|+.-..++ .-+.-|.|.+||+.++..+
T Consensus 249 ~~~~~~~~~~Dfpv~~~vs~k~g~iy-~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 249 DVFFPPEAQNDFPVAMQISEKHDVVF-LITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred cccCCcccccCcceEEEeccccCEEE-EEecCceEEEEecccchhh
Confidence 0111 11134556677666664 4567899999999998743
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.17 E-value=0.97 Score=43.32 Aligned_cols=164 Identities=13% Similarity=0.057 Sum_probs=90.6
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEec------CCCcEEEEEEcCC---CCEEEEEe-C-----
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIEC------HPDIVYSASWNWD---GSKLLTTC-K----- 278 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~-~----- 278 (490)
...+.|+|.|+|+ ++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|..+. .
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3567999999995 655543334788888655543 222221 2456789999995 44444433 2
Q ss_pred -------CCeEEEEeCCCC--c-----eee-eeeecCCCceeEEEEeCCCcEEEEEeCCCc-------------------
Q psy17682 279 -------DKKMRIINPRTG--A-----IEE-EAVCHEGSKATRAIYLKSGLIFTTGFSKMS------------------- 324 (490)
Q Consensus 279 -------dg~i~iwd~~~~--~-----~~~-~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~------------------- 324 (490)
...|.-++.... . .+. .+..........++|.|||.++++.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~ 185 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQ 185 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHH
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccc
Confidence 234666655322 1 111 111111123789999999987776543211
Q ss_pred ----------eeEEEEecCCCCC---CC------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682 325 ----------ERQYSLRAPDHLD---EP------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381 (490)
Q Consensus 325 ----------~~~i~iwd~~~~~---~~------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~ 381 (490)
.+.|.-.+.+..- .+ ..+....+ .....++|+|+|++.++--+.++.-.|..+..+
T Consensus 186 ~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g~~~~dein~i~~G 260 (454)
T 1cru_A 186 ELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQGPNSDDEINLIVKG 260 (454)
T ss_dssp HHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEECSSSCEEEEECCTT
T ss_pred cccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecCCCCCeEEEEecCC
Confidence 2444444554320 01 11222233 557889999988766444455655566666544
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.99 E-value=1.7 Score=44.72 Aligned_cols=230 Identities=9% Similarity=0.010 Sum_probs=126.6
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd 244 (490)
...|.+|.-..+| ++-.|..+| +..||-..- ..+... .......|.++.-..++ .|..|+.+| +..||
T Consensus 21 ~n~V~~I~qD~~G--~lWigT~~G-L~ryDG~~~---~~~~~~---~~~~~~~i~~i~~d~~g--~lWigT~~G-l~~yd 88 (758)
T 3ott_A 21 ASVVSCFLQDSEG--LIWIGSNKG-LFSYDGYST---QQHFTY---GENNNTRIYCGVIIDNT--YLYMGTDNG-ILVYN 88 (758)
T ss_dssp CCCEEEEEECTTS--CEEEEESSC-EEEECSSCE---EECSCT---TSTTSSCEEEEEEETTT--EEEEEETTE-EEEEE
T ss_pred cceEEEEEECCCC--CEEEEECCC-ccccCCCce---EEEEcc---CCCCCceEEEEEEcCCC--cEEEEeCCC-eEEEe
Confidence 4679999988877 455566776 566763221 111110 00124568888777665 566676655 78899
Q ss_pred CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee----ecCCCceeEEEEeCCCcEEEEEe
Q psy17682 245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV----CHEGSKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~~~ 320 (490)
..+.+...........|.++.. .++ .|..++.+ .+..||..+++.. .+. ......+.++....+|.+.+. +
T Consensus 89 ~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWig-t 163 (758)
T 3ott_A 89 YRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVG-T 163 (758)
T ss_dssp TTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEE-E
T ss_pred CCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEE-e
Confidence 8876432211112335777654 344 56666665 6888998766533 221 112234777777778877664 3
Q ss_pred CCCceeEEEEecCCCCCCCeEEEeccC-----CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCC
Q psy17682 321 SKMSERQYSLRAPDHLDEPIVMVELDT-----SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPD 395 (490)
Q Consensus 321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 395 (490)
.. -+..++..+.. ........ ...|.++...+++..|++ |+ ++-+..++..+++ + ....... ..
T Consensus 164 ---~~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt-~~Gl~~~~~~~~~-~-~~~~~l~-~~ 232 (758)
T 3ott_A 164 ---YN-GLCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GT-EGYLFQYFPSTGQ-I-KQTEAFH-NN 232 (758)
T ss_dssp ---TT-EEEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EE-EEEEEEEETTTTE-E-EEEEEEE-EE
T ss_pred ---CC-CHhhCccCCCc--eEEecCCCccccccceeEEEEEECCCCEEEE-EE-CCCCeEEcCCCCe-E-EeccCCC-CC
Confidence 23 36677766432 11111111 123777777777775544 43 3457788876653 2 1221111 23
Q ss_pred ceeeEEEeeCceeEEeecceeEEEEec
Q psy17682 396 PQRGIGMMPKRGCDVNSCEIGRFFRLN 422 (490)
Q Consensus 396 ~i~~~~~sp~~~~l~~~~~~~~~~~~~ 422 (490)
.|.++...++|.+.+...+-+.+++..
T Consensus 233 ~i~~i~~d~~g~lWigT~~Gl~~~~~~ 259 (758)
T 3ott_A 233 SIKSLALDGNGDLLAGTDNGLYVYHND 259 (758)
T ss_dssp EEEEEEECTTCCEEEEETTEEEEECCT
T ss_pred eEEEEEEcCCCCEEEEeCCceeEEecC
Confidence 577787777777666554433344433
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.96 E-value=0.99 Score=41.60 Aligned_cols=148 Identities=7% Similarity=0.017 Sum_probs=79.5
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE---EEE----ecCCCcEEEEEEcCC---CCEEEEE-eC------
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM---IQI----ECHPDIVYSASWNWD---GSKLLTT-CK------ 278 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~------ 278 (490)
.....|+|.|+++. |+++...|.|++++.. ++.. ..+ .........++++|+ +..|... +.
T Consensus 18 ~~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHG-MLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCC-EEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCE-EEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 34689999999842 4555678999999853 3321 111 112346789999995 4444443 32
Q ss_pred -CCeEEEEeCCCC--c--eeeee-eec-----CCCceeEEEEeCCCcEEEEEeCCCc----------eeEEEEecCCCCC
Q psy17682 279 -DKKMRIINPRTG--A--IEEEA-VCH-----EGSKATRAIYLKSGLIFTTGFSKMS----------ERQYSLRAPDHLD 337 (490)
Q Consensus 279 -dg~i~iwd~~~~--~--~~~~~-~~~-----~~~~~~~~~~s~~~~~l~~~~~~~~----------~~~i~iwd~~~~~ 337 (490)
...|..|+.... . ....+ ... .......++|.|+|.++++-++.+. .+.|.-++.+..-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666433 1 11111 110 1112467999999987776543211 2456566655320
Q ss_pred ---C--------CeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682 338 ---E--------PIVMVELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 338 ---~--------~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
. ...+.... ......++|+|+...|+++
T Consensus 176 p~~npf~~~~~~~~~i~a~G-~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYG-IRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEEC-CSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEc-CcCccceEEECCCCCEEEE
Confidence 0 11122222 2457889999943344444
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.82 E-value=0.75 Score=41.53 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=55.2
Q ss_pred CEEEEEeCC--------CcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCce
Q psy17682 229 NVLLTAGSD--------NNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCK-D-----KKMRIINPRTGAI 292 (490)
Q Consensus 229 ~~l~s~~~d--------g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~ 292 (490)
.+++.|+.+ ..+.+||..+.+-.. .+.........+. -+++.++.|+. + ..+.+||+.+.+-
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 477777732 458899998765222 1111111112222 35677777775 2 4689999987643
Q ss_pred eeeeeecCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCC
Q psy17682 293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHL 336 (490)
Q Consensus 293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~ 336 (490)
...-..... .....+..-++++++.|+.+. ....+.+||+.+.
T Consensus 178 ~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 178 KELAPMQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EECCCCSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EECCCCCCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 222111111 111122223677777776322 2346888988764
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.75 E-value=0.2 Score=44.99 Aligned_cols=190 Identities=13% Similarity=0.143 Sum_probs=91.3
Q ss_pred CEEEEEeCC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-----cEEEEECCCC
Q psy17682 179 NVIASGSED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-----NVAIWNVGTG 248 (490)
Q Consensus 179 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 248 (490)
.+++.|+.+ ..+.+||..+.+-... .. +.........+.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-AN----MRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEE-CC----CSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTT
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeC-CC----CCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCC
Confidence 566666644 3588888876543221 11 1111111122222 44 4777777653 5778898776
Q ss_pred eeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..... .....+..-++++++.|
T Consensus 135 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~G 211 (302)
T 2xn4_A 135 EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGVGVLNNLLYAVG 211 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEC
T ss_pred eEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccccEEEECCEEEEEC
Confidence 53222 1111111122222 56677776542 4588999987653322111111 11111222367788877
Q ss_pred eCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-----eEEEEEecCCC
Q psy17682 320 FSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-----VIRYFEITAEP 382 (490)
Q Consensus 320 ~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-----~i~iwd~~~~~ 382 (490)
+.++. ...+.+||+.+..- ...........-..++. -+++ |++.|+.++ .+.+||..+.+
T Consensus 212 G~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTTNAW-RQVADMNMCRRNAGVCA-VNGL-LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CBSSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCCE-eeCCCCCCccccCeEEE-ECCE-EEEECCcCCCcccccEEEEcCCCCe
Confidence 63221 34688899876431 11111111111111222 2444 446676543 47888887764
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.66 E-value=1.1 Score=40.49 Aligned_cols=188 Identities=10% Similarity=0.069 Sum_probs=87.5
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC----CC-------cEEEEECCCC
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS----DN-------NVAIWNVGTG 248 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----dg-------~v~iwd~~~~ 248 (490)
+++.|+. .+..||..+++-.. .. ...............++ .+++.|+. ++ .+.+||..+.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~-----~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TA-----LAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EE-----ECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred hhhcccc--ceEEECCCCCceec-cc-----CCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCC
Confidence 3444443 37888987665322 11 11111111222223444 48888873 12 1778888776
Q ss_pred eeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-... .......+...++++++.|
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~G 165 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVISHNGMIYCLG 165 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEEETTEEEEEC
T ss_pred cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEEECCEEEEEc
Confidence 53221 1111111122222 56777777754 35889999876533221111 1111112222467777777
Q ss_pred eCC---CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682 320 FSK---MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP 382 (490)
Q Consensus 320 ~~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~ 382 (490)
+.. .....+.+||+.+..- ...........-..++. -++ .|++.|+.+ ..+.+||+.+.+
T Consensus 166 G~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 521 1134588889876431 11111111111112222 234 444666543 356788887764
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.65 E-value=1.7 Score=42.08 Aligned_cols=242 Identities=8% Similarity=-0.055 Sum_probs=133.3
Q ss_pred EEEEEeCCCcEEEEECCCCCcccccccce--------------eeecc----cccCEE--EEEEe---eCCCCEEEEEeC
Q psy17682 180 VIASGSEDCVVKVWQIPDGGISRTLTEPV--------------VDLLY----HQRRVG--LVLWH---PTAQNVLLTAGS 236 (490)
Q Consensus 180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~----~~~~v~--~~~~~---p~~~~~l~s~~~ 236 (490)
.|.||+..|.|+|+-+.+++.++.+..-. ..+.. ..+... .+++. .||+.+++---.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 47788999999999998888776653100 00000 011111 22232 346533444445
Q ss_pred CCcEEEEECCCCeeEEEEe-cCCCcEEEEEEc--CCCCEEEEEeC-------CCeE------------EEEeCCCCceee
Q psy17682 237 DNNVAIWNVGTGEIMIQIE-CHPDIVYSASWN--WDGSKLLTTCK-------DKKM------------RIINPRTGAIEE 294 (490)
Q Consensus 237 dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i------------~iwd~~~~~~~~ 294 (490)
+..|...+++..++-..++ .....+..+.+- |+-.+++.+++ ||.. ...|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 6778888988887655544 356678888886 67778888774 3321 112222333322
Q ss_pred eeeecCCCceeEEEEeCCCcEEEEEeCCC------------ceeEEEEe-------------------------cCCCCC
Q psy17682 295 EAVCHEGSKATRAIYLKSGLIFTTGFSKM------------SERQYSLR-------------------------APDHLD 337 (490)
Q Consensus 295 ~~~~~~~~~~~~~~~s~~~~~l~~~~~~~------------~~~~i~iw-------------------------d~~~~~ 337 (490)
++.... ....+...++|.+.++.+... ....+.++ |.+...
T Consensus 232 Qv~v~g--nld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 232 QVIVDG--NLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred EEEcCC--ChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence 222211 133445566777666554211 11223333 333200
Q ss_pred --CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC------C---CeeEEeeeeeCCCceeeEEEeeCc
Q psy17682 338 --EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE------P---PFVHYINTFQTPDPQRGIGMMPKR 406 (490)
Q Consensus 338 --~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~------~---~~~~~~~~~~~~~~i~~~~~sp~~ 406 (490)
.......+........+..+|||++++++|-.+.++.++|+..- + +--........+-.....+|.++|
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG 389 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC
Confidence 00011111222345677899999999999999999999999841 1 000112223334456889999999
Q ss_pred eeEEee--cceeEEEEecC
Q psy17682 407 GCDVNS--CEIGRFFRLNN 423 (490)
Q Consensus 407 ~~l~~~--~~~~~~~~~~~ 423 (490)
....+- ++.+--|++..
T Consensus 390 ~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEEETTTTEEEEEEHHH
T ss_pred ceEeeeeecceEEEEeccH
Confidence 543332 67778898865
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.34 E-value=1.5 Score=40.33 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=53.9
Q ss_pred CCCCEEEEEeC-C---------CcEEEEECCCCeeEEE--Ee-cCCCcEEEEEEcCCCCEEEEEeCC-------------
Q psy17682 226 TAQNVLLTAGS-D---------NNVAIWNVGTGEIMIQ--IE-CHPDIVYSASWNWDGSKLLTTCKD------------- 279 (490)
Q Consensus 226 ~~~~~l~s~~~-d---------g~v~iwd~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~d------------- 279 (490)
++ .+++.|+. + ..+.+||+.+.+-... +. ........+. .++++++.|+.+
T Consensus 65 ~~-~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~ 141 (357)
T 2uvk_A 65 DG-NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNE 141 (357)
T ss_dssp TT-EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHH
T ss_pred CC-EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhh
Confidence 44 47777765 2 4688999987653221 11 1111122222 467788888754
Q ss_pred --------------------------CeEEEEeCCCCceeeeeeecCCCce-eEEEEeCCCcEEEEEeCCC---ceeEEE
Q psy17682 280 --------------------------KKMRIINPRTGAIEEEAVCHEGSKA-TRAIYLKSGLIFTTGFSKM---SERQYS 329 (490)
Q Consensus 280 --------------------------g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~~~~~~---~~~~i~ 329 (490)
..+.+||..+.+-...-........ ..++. -++++++.|+... ....+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~ 220 (357)
T 2uvk_A 142 AGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVF 220 (357)
T ss_dssp HTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEE
T ss_pred cCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceE
Confidence 5799999987654332221111112 22222 3667777765211 123466
Q ss_pred EecC
Q psy17682 330 LRAP 333 (490)
Q Consensus 330 iwd~ 333 (490)
+||+
T Consensus 221 ~~d~ 224 (357)
T 2uvk_A 221 ELDF 224 (357)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6766
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.98 E-value=1 Score=45.96 Aligned_cols=200 Identities=13% Similarity=0.014 Sum_probs=100.0
Q ss_pred CEEEEEeCC----CcEEEEECCCCCccccc-ccceeeecccccCEEEEEEee-CCCCEEEEEeCC------CcEEEEECC
Q psy17682 179 NVIASGSED----CVVKVWQIPDGGISRTL-TEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSD------NNVAIWNVG 246 (490)
Q Consensus 179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~d------g~v~iwd~~ 246 (490)
.+++.||.+ ..+.+||..+++-...- ..|.......... .+++..+ ++ .+++.||.+ ..+.+||..
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCC
Confidence 677777643 45888888766532211 1000001101111 2233333 55 477777754 357889988
Q ss_pred CCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeeeee---ec-CCCceeEEEEeCC-CcEEE
Q psy17682 247 TGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKDK--KMRIINPRTGAIEEEAV---CH-EGSKATRAIYLKS-GLIFT 317 (490)
Q Consensus 247 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~---~~-~~~~~~~~~~s~~-~~~l~ 317 (490)
+.+-... +..... -.+++...+++.++.|+.++ .+.+||..+.+-...-. .. .......+.+..+ +++++
T Consensus 477 t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 7542221 111111 12233324788888887654 69999998765332211 00 1111233555655 77888
Q ss_pred EEeCCC----ceeEEEEecCCCCCC-----CeEEEecc-CCCceeeeeecCCCCeEEEEecC--------CCeEEEEEec
Q psy17682 318 TGFSKM----SERQYSLRAPDHLDE-----PIVMVELD-TSNGVMFPLYDPDTNLVYLCGKG--------DSVIRYFEIT 379 (490)
Q Consensus 318 ~~~~~~----~~~~i~iwd~~~~~~-----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~--------dg~i~iwd~~ 379 (490)
.|+... ....+.+||+.+... -....... ....-..++...+++ |++.|+. ...+.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECC
Confidence 876421 235788999887651 11111111 111111222222244 4466764 3468899998
Q ss_pred CCC
Q psy17682 380 AEP 382 (490)
Q Consensus 380 ~~~ 382 (490)
+.+
T Consensus 635 t~~ 637 (695)
T 2zwa_A 635 SET 637 (695)
T ss_dssp TTE
T ss_pred CCe
Confidence 764
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.96 E-value=2 Score=38.70 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=55.8
Q ss_pred CCCCEEEEEeCC-------CcEEEEECCCCeeEEEEecCCCcE--EEEEEcCCCCEEEEEeC------CCeEEEEeCCCC
Q psy17682 226 TAQNVLLTAGSD-------NNVAIWNVGTGEIMIQIECHPDIV--YSASWNWDGSKLLTTCK------DKKMRIINPRTG 290 (490)
Q Consensus 226 ~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~ 290 (490)
++ .+++.|+.+ ..+.+||+.+.+-.. +.....+. .+++. .++++++.|+. -..+.+||+.+.
T Consensus 109 ~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 44 477777754 347888988765332 21111111 11222 35677777764 235999999877
Q ss_pred ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCCC
Q psy17682 291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHLD 337 (490)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~~ 337 (490)
+-...-..........++. -++++++.|+... ....+.+||+.+..
T Consensus 186 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5332211111111112222 3677777775321 13567889988653
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.49 E-value=2.4 Score=43.23 Aligned_cols=152 Identities=16% Similarity=0.064 Sum_probs=81.1
Q ss_pred CEEEEEeCC----CcEEEEECCCCeeEEEE-e------cCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCC
Q psy17682 229 NVLLTAGSD----NNVAIWNVGTGEIMIQI-E------CHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTG 290 (490)
Q Consensus 229 ~~l~s~~~d----g~v~iwd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~ 290 (490)
.+++.||.+ ..+.+||..+++-...- . .....-.+++..+ +++.++.|+.+ ..+.+||..+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 477788753 46888998876533222 1 0111112333333 67788887754 35889999876
Q ss_pred ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe---cc-CCCceeeeeecCCCCeEEEE
Q psy17682 291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE---LD-TSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~---~~-~~~~i~~~~~s~~~~~l~~~ 366 (490)
+-...-.......-.+++...++++++.|+.+... .+.+||..+..-. .... .. .......+.+..+...|++.
T Consensus 479 ~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~-~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 479 EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFK-DVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEE-ECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceE-EccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 43222111111112223333478888888754333 7888998864310 0010 11 11122335556554555577
Q ss_pred ecC--C-----CeEEEEEecCCC
Q psy17682 367 GKG--D-----SVIRYFEITAEP 382 (490)
Q Consensus 367 g~~--d-----g~i~iwd~~~~~ 382 (490)
|+. + ..+.+||+.+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCcCCCCCeeeCcEEEEEccCCc
Confidence 765 2 468899998876
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.40 E-value=0.6 Score=42.00 Aligned_cols=190 Identities=11% Similarity=0.070 Sum_probs=90.0
Q ss_pred CEEEEEeC----C-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEE
Q psy17682 179 NVIASGSE----D-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWN 244 (490)
Q Consensus 179 ~~l~s~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd 244 (490)
.+++.|+. + ..+.+||..+.+-...-. +.........+.+ ++ .+++.|+.+ ..+.+||
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP-----MSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC-----CSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC-----CCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEEC
Confidence 56666654 2 468888887664322111 1111111122222 44 477777643 3588899
Q ss_pred CCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682 245 VGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317 (490)
Q Consensus 245 ~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 317 (490)
+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-..........++. -++++++
T Consensus 144 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv 220 (308)
T 1zgk_A 144 PERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYA 220 (308)
T ss_dssp TTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEE
T ss_pred CCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEE
Confidence 887653221 1111111222223 56777777654 458999988765322211111111112222 2677877
Q ss_pred EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682 318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP 382 (490)
Q Consensus 318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~ 382 (490)
.|+.+.. ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.+ ..+.+||+.+.+
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH-QG-RIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EeCCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEEE-CC-EEEEEcCcCCCcccceEEEEcCCCCE
Confidence 7763221 356888988764311 11111111111122222 34 444666643 356777777653
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.30 E-value=2.5 Score=37.82 Aligned_cols=180 Identities=5% Similarity=-0.056 Sum_probs=97.3
Q ss_pred EEECCCCCCEEEEEeCC-------------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--
Q psy17682 171 IAWSPHDDNVIASGSED-------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-- 235 (490)
Q Consensus 171 ~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-- 235 (490)
--++++|+.+..+...+ ..|+..++...+.... .... +..|+++++ .|+-..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l----------~~~~--~~~~s~~g~-~Iy~~~~~ 124 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVL----------DPDP--CIYASLIGN-YIYYLHYD 124 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEE----------ECSC--EEEEEEETT-EEEEEEES
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEe----------ecCC--ccEEEEeCC-EEEEEeec
Confidence 34577774444444433 4677777765543221 1111 236788886 555443
Q ss_pred --CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC
Q psy17682 236 --SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS 312 (490)
Q Consensus 236 --~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~ 312 (490)
.+..|..-++.. .....+..+.. .+++++++.|.-.+. ...|+..++..+.....+. +. .. ..++|+
T Consensus 125 ~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~-~~-~~~~P~ 194 (302)
T 3s25_A 125 TQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CN-CY-KPVVLD 194 (302)
T ss_dssp SSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SC-EE-EEEEEE
T ss_pred CCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CC-cc-ceeeec
Confidence 334566666653 33444543332 456778887776665 5778888887665433222 21 22 235688
Q ss_pred CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe-cCCCeEEEEEecCC
Q psy17682 313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG-KGDSVIRYFEITAE 381 (490)
Q Consensus 313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g-~~dg~i~iwd~~~~ 381 (490)
+.+|+-.... ....|..-+++..... .+. ...+ ..|+|+++.|+.+. ...+.|..-++...
T Consensus 195 g~~iy~t~~~-~~~~I~~~~ldG~~~~-~Lt----~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 195 DTNVYYMDVN-RDNAIVHVNINNPNPV-VLT----EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp TTEEEEEEGG-GTTEEEEECSSSCCCE-ECS----CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CCEEEEEEcC-CCcEEEEEECCCCCeE-EEe----CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 8777665421 1246666677654421 111 1222 45889999997653 23455555555543
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.05 E-value=3.5 Score=37.72 Aligned_cols=140 Identities=6% Similarity=-0.052 Sum_probs=62.1
Q ss_pred CcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeC--CCCceee--eeeecCCCcee
Q psy17682 238 NNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCK------DKKMRIINP--RTGAIEE--EAVCHEGSKAT 305 (490)
Q Consensus 238 g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~--~~~~~~~--~~~~~~~~~~~ 305 (490)
..+.+||..+.+-.. .+......-.+++.. ++++++.|+. ...+.+||+ .+.+-.. .+..... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-VAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC-CBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc-ccc
Confidence 478899998765322 222111110223322 5667777653 345777887 4332211 1111111 112
Q ss_pred EEEEeCCCcEEEEEeCCCc-------------------eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682 306 RAIYLKSGLIFTTGFSKMS-------------------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC 366 (490)
Q Consensus 306 ~~~~s~~~~~l~~~~~~~~-------------------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 366 (490)
..+...++++++.|+.... ...+.+||+.+..-. .+........ ...+...+++.+ +.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~-~~~~~~~~~~i~-v~ 322 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD-KSGELSQGRA-YGVSLPWNNSLL-II 322 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE-EEEECSSCCB-SSEEEEETTEEE-EE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee-eCCCCCCCcc-cceeEEeCCEEE-EE
Confidence 2233346777777752100 135778998865422 2222222111 122223345554 56
Q ss_pred ecCCC------eEEEEEecCCC
Q psy17682 367 GKGDS------VIRYFEITAEP 382 (490)
Q Consensus 367 g~~dg------~i~iwd~~~~~ 382 (490)
|+.++ .|.++++++++
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCS
T ss_pred eeeCCCCCEeeeEEEEEEcCcE
Confidence 66432 45666888776
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.91 E-value=5 Score=38.98 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=55.0
Q ss_pred eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----------CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682 304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD----------EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI 373 (490)
Q Consensus 304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~----------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i 373 (490)
...+..+|||+++++++. .+.++.++|.+... ......+.....+....+|+++| ..|.+--.|..|
T Consensus 325 PHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp CCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 567889999999988763 57788999887421 11123334445668899999999 666777899999
Q ss_pred EEEEecC
Q psy17682 374 RYFEITA 380 (490)
Q Consensus 374 ~iwd~~~ 380 (490)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999975
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.90 E-value=6.6 Score=40.35 Aligned_cols=239 Identities=10% Similarity=0.023 Sum_probs=124.8
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc--ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI--SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
..|.++.-..+| . |..|+.+| +..++..+++. ...+........-....|.++.-..++. |-.|+. +-+..+
T Consensus 324 ~~v~~i~~D~~g-~-lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~-~GL~~~ 397 (758)
T 3ott_A 324 NQFYSLFRDSKG-F-YWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ--LWIATD-GSINRY 397 (758)
T ss_dssp CBEEEEEECTTC-C-EEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC--EEEEET-TEEEEE
T ss_pred ceEEEEEEcCCC-C-EEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCC--EEEEeC-CcHhhc
Confidence 468888888776 3 44455554 66666544321 1111100000001234588888777774 445554 568999
Q ss_pred ECCCCeeEEEEe-c-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----cee---eeee---ecCCCceeE
Q psy17682 244 NVGTGEIMIQIE-C-----HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG-----AIE---EEAV---CHEGSKATR 306 (490)
Q Consensus 244 d~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~---~~~~---~~~~~~~~~ 306 (490)
|..+++...-.. . ....|.++.-.++++ |..|+..+-|.++|..+. ... ..+. +.....+.+
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 476 (758)
T 3ott_A 398 DYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQ 476 (758)
T ss_dssp ETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEE
T ss_pred CcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceeee
Confidence 988775433211 1 124588888776665 556776667888885421 111 1111 112224788
Q ss_pred EEEeCCCcEEEE-EeCCCceeEEEEecCCCCCCCeEEEecc---CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 307 AIYLKSGLIFTT-GFSKMSERQYSLRAPDHLDEPIVMVELD---TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 307 ~~~s~~~~~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
+...++|.+.+. ++ .+-+..+|..+.. ....... ....+.++....+|+.. ++ +.+| +..|+..+.+
T Consensus 477 i~~d~~g~lWi~~~t----~~Gl~~~d~~~~~--~~~~~~~~~~~~~~~~~i~~d~~g~lW-ig-t~~G-l~~~~~~~~~ 547 (758)
T 3ott_A 477 IIPDNEGNVWVLLYN----NKGIDKINPRTRE--VTKLFADELTGEKSPNYLLCDEDGLLW-VG-FHGG-VMRINPKDES 547 (758)
T ss_dssp EEECTTSCEEEEETT----CSSEEEEETTTTE--EEEECTTTSCGGGCEEEEEECTTSCEE-EE-ETTE-EEEECC--CC
T ss_pred EEEcCCCCEEEEccC----CCCcEEEeCCCCc--eEEecCCCcCCCcccceEEECCCCCEE-EE-ecCc-eEEEecCCCc
Confidence 888888887763 43 3346777876542 1111111 12346777788888776 33 3444 7788876654
Q ss_pred CeeEE-eeeeeCCCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682 383 PFVHY-INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNN 423 (490)
Q Consensus 383 ~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~ 423 (490)
+... ...+. ...|.++... +|.+-+++..-+..++..+
T Consensus 548 -~~~~~~~gl~-~~~i~~i~~~-~g~lWi~t~~Gl~~~~~~~ 586 (758)
T 3ott_A 548 -QQSISFGSFS-NNEILSMTCV-KNSIWVSTTNGLWIIDRKT 586 (758)
T ss_dssp -CCBCCCCC----CCEEEEEEE-TTEEEEEESSCEEEEETTT
T ss_pred -eEEecccCCC-ccceEEEEEC-CCCEEEECCCCeEEEcCCC
Confidence 1111 01111 2356777654 6666555544444444443
No 345
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.14 E-value=4.7 Score=36.31 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=123.2
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecc--cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGH--KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY 213 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 213 (490)
...+.+++++ ... .++.| ...|.-=.|-.. +.|+-.+. ..|.-|++.... .|...+..
T Consensus 86 g~~LQiFnle----tK~-------klks~~~~e~VvfWkWis~--~~L~lVT~-taVyHWs~~~~s------~P~kvFdR 145 (365)
T 2xzh_A 86 GKTLQIFNIE----MKS-------KMKAHTMTDDVTFWKWISL--NTVALVTD-NAVYHWSMEGES------QPVKMFDR 145 (365)
T ss_dssp TTEEEEEETT----TTE-------EEEEEECSSCEEEEEECSS--SEEEEEES-SEEEEEESSTTC------CCEEEEEC
T ss_pred CCeEEEechH----Hhh-------hhcceecCCccEEEEecCC--CeEEEEcC-CcEEEEcccCCC------CCceeeec
Confidence 6789999997 222 23344 356666677643 45666554 489999987532 22222222
Q ss_pred c----ccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC--C-CEEEEEeC--
Q psy17682 214 H----QRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD--G-SKLLTTCK-- 278 (490)
Q Consensus 214 ~----~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~~-- 278 (490)
| ...|..-..+++.+.++++|- -.|.+.+|..+.+ .-+.+++|......+...-+ . +.++.+..
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 345666677787765555543 2367888987644 44566777544333322211 1 23343332
Q ss_pred -CCeEEEEeCCCC---ce-----eeeee-e--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 279 -DKKMRIINPRTG---AI-----EEEAV-C--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 279 -dg~i~iwd~~~~---~~-----~~~~~-~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
.+.++|.++... .+ ...+. . .......++..++...++..-+ .-|.+++||+.++.+....+-
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT---K~G~ihlyDleTgt~i~~nrI-- 299 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNRI-- 299 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCEEEEEEC--
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe---CCcEEEEEEcccCcEEEEecc--
Confidence 268999998543 11 11111 1 1123367777887765555555 689999999999876544332
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
....|...+.+....-+ ++-...|.|.--.+++..
T Consensus 300 S~d~iF~ta~~~~~~Gi-~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 300 SGETIFVTAPHEATAGI-IGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CSSCEEEEEEEGGGTEE-EEEETTCEEEEEEECTTT
T ss_pred CCCceEEecccCCCCcE-EEEcCCCEEEEEEECccc
Confidence 22345444444444444 234467777666666554
No 346
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=92.99 E-value=5.6 Score=36.76 Aligned_cols=143 Identities=10% Similarity=0.078 Sum_probs=85.0
Q ss_pred cEEEEECCCC--CcccccccceeeecccccCEEEEEEe---eC---CCCEEEEEe-CCCcEEEEECCCCeeEEEEe----
Q psy17682 189 VVKVWQIPDG--GISRTLTEPVVDLLYHQRRVGLVLWH---PT---AQNVLLTAG-SDNNVAIWNVGTGEIMIQIE---- 255 (490)
Q Consensus 189 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---p~---~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~---- 255 (490)
+|.+||+.++ +.++.+.-|..... ..+.+..+++. |. +..++..+. ..+.|.|+|+.+++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 5778888888 77777654433333 34678888888 22 122444433 46789999999887655442
Q ss_pred cC--------------CCcEEEEEEcCC----CCEEEEEeCCC-eEEEEe---CCCCceee--eeeecCC--CceeEEEE
Q psy17682 256 CH--------------PDIVYSASWNWD----GSKLLTTCKDK-KMRIIN---PRTGAIEE--EAVCHEG--SKATRAIY 309 (490)
Q Consensus 256 ~~--------------~~~v~~~~~~~~----~~~l~~~~~dg-~i~iwd---~~~~~~~~--~~~~~~~--~~~~~~~~ 309 (490)
.. ...+..|+++|+ ++.|.-....+ .++-.. ++...... +..+..+ .....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 00 246888999997 67666665443 333332 12222111 1123332 22445667
Q ss_pred e-CCCcEEEEEeCCCceeEEEEecCCC
Q psy17682 310 L-KSGLIFTTGFSKMSERQYSLRAPDH 335 (490)
Q Consensus 310 s-~~~~~l~~~~~~~~~~~i~iwd~~~ 335 (490)
. .+|.++.+-. ....|..|+..+
T Consensus 283 D~~~G~ly~~~~---~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEA---NTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEES---SSSEEEEEETTS
T ss_pred eCCCCeEEEEec---cCCeEEEEeCCC
Confidence 5 6788777665 578899999875
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.63 E-value=5.4 Score=35.65 Aligned_cols=173 Identities=5% Similarity=-0.029 Sum_probs=94.1
Q ss_pred eCCCCEEEEEeC-CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--------------CeEEEEeCCC
Q psy17682 225 PTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--------------KKMRIINPRT 289 (490)
Q Consensus 225 p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~ 289 (490)
+++..+.++... ++.|...+..... ...+... . +--+++++..|.-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 455434444322 4556666654333 3334321 1 23457788887776543 4678888876
Q ss_pred CceeeeeeecCCCceeEEEEeCCCcEEEEEe-CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682 290 GAIEEEAVCHEGSKATRAIYLKSGLIFTTGF-SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK 368 (490)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~ 368 (490)
.+... +.. . ....+++++..|+-.. .......|...+++.... ..+.. + .+ ..++++++.|+.+..
T Consensus 98 ~~~~~-l~~--~---~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~--~--~~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 98 HGSTV-LDP--D---PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKN--H--YL--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp CCCEE-EEC--S---CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEES--S--CC--CCSEEETTEEEEECT
T ss_pred CcceE-eec--C---CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeC--C--Cc--eEeeEECCEEEEEeC
Confidence 65322 221 1 1236777888777654 112356777778775432 22221 1 11 467889999988866
Q ss_pred CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682 369 GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN 422 (490)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~ 422 (490)
....|.+.++..+. .+.+ +.. +. ...++|++.+++-.. +..++++..
T Consensus 165 g~~~Iy~~~l~g~~--~~~l--~~~--~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ 213 (302)
T 3s25_A 165 KNGQLYRYDTASQS--EALF--YDC--NC-YKPVVLDDTNVYYMDVNRDNAIVHVN 213 (302)
T ss_dssp TTCCEEEEETTTTE--EEEE--ECS--CE-EEEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred CCceEEEEECCCCC--EEEE--eCC--Cc-cceeeecCCEEEEEEcCCCcEEEEEE
Confidence 56778877776654 1222 122 22 234668887766442 223566544
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.34 E-value=11 Score=39.72 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=33.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV 297 (490)
Q Consensus 260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 297 (490)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46778888888999999999999999999999887764
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.15 E-value=5.4 Score=36.29 Aligned_cols=107 Identities=12% Similarity=0.008 Sum_probs=65.2
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEE--cCCCCEEEEE--eCCCeEEEEeCCCCceeeeeeecC---C
Q psy17682 230 VLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASW--NWDGSKLLTT--CKDKKMRIINPRTGAIEEEAVCHE---G 301 (490)
Q Consensus 230 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~---~ 301 (490)
+++.++.||.|.-.|..+|+...+++.. ..++....- .+.+..++.+ +.||.|+.+|..+|.....+.... .
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 7889999999999999999999998743 122222110 0112234444 589999999998885554443111 1
Q ss_pred CceeE---EEE-e----CCCcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682 302 SKATR---AIY-L----KSGLIFTTGFSKMSERQYSLRAPDHLDEP 339 (490)
Q Consensus 302 ~~~~~---~~~-s----~~~~~l~~~~~~~~~~~i~iwd~~~~~~~ 339 (490)
.+... ... . ..+..+.+|+ .++.+.-.|+.+++..
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs---~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGS---MRTIMYTINMLNGEII 134 (339)
T ss_dssp CSEEEECC----------CCEEEEECE---EEEEEEEEETTTCCEE
T ss_pred cccccCCCceeecccccccCCEEEEEe---cCCEEEEEECCCCcEE
Confidence 11111 001 0 0344555666 6899999999988743
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.64 E-value=11 Score=35.39 Aligned_cols=220 Identities=12% Similarity=0.043 Sum_probs=126.9
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeeccc--CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHK--GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY 213 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 213 (490)
...+.+++++ ... .++.|. ..|.-=.|-.+ +.|+-.+ +..|.-|++.... .|...+..
T Consensus 85 g~~lQiFnle----~K~-------klks~~~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s------~P~kvFdR 144 (494)
T 1bpo_A 85 GKTLQIFNIE----MKS-------KMKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGES------QPVKMFDR 144 (494)
T ss_dssp TTEEEEEETT----TTE-------EEEEEECSSCCCEEEEEET--TEEEEEC-SSEEEEEESSSSC------CCEEEEEC
T ss_pred CCeEEEEchH----Hhh-------hhcceecCCCceEEEecCC--CeEEEEc-CCeeEEecccCCC------Cchhheec
Confidence 7889999996 222 233442 45666667542 4566555 4589999986532 22222322
Q ss_pred c----ccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC---CEEEEEeC--
Q psy17682 214 H----QRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG---SKLLTTCK-- 278 (490)
Q Consensus 214 ~----~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~-- 278 (490)
| ...|..-..+++.+.++++|- -.|.+.+|..+.+ .-+.+++|......+...-+. ..++.+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 345667777888765555543 2367888987644 445677776544444332211 23444443
Q ss_pred -CCeEEEEeCCCC---ce-----eeeee-e--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 279 -DKKMRIINPRTG---AI-----EEEAV-C--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 279 -dg~i~iwd~~~~---~~-----~~~~~-~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
.+.++|.++... .+ ...+. . ........+..++...++..-+ .-|.+++||+.++.+..... -
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT---K~G~i~lyDleTgt~i~~nr--I 298 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNR--I 298 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCEEEEEE--C
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe---cCceEEEEecccceeeeeec--c
Confidence 378999998643 11 11111 1 1123367788888765555555 68999999999988655443 2
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
....|...+.+....-+ ++-...|.|.--.+++..
T Consensus 299 s~~~iF~t~~~~~~~Gi-~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 299 SGETIFVTAPHEATAGI-IGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CSSCEEEEEEETTTTEE-EEEETTCEEEEEEECTTT
T ss_pred cCCceEEecccCCCCcE-EEEccCceEEEEEEcccc
Confidence 23445555555555555 344577877777776654
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.60 E-value=23 Score=38.90 Aligned_cols=226 Identities=12% Similarity=0.037 Sum_probs=117.2
Q ss_pred eCCCceEEEECCCCCCCCcccCCCCcceeecc--cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC-ccccccccee
Q psy17682 133 LKSQQALSILPPPSTAPNTGRINADHALVGGH--KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG-ISRTLTEPVV 209 (490)
Q Consensus 133 ~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~ 209 (490)
...+..+.||+++ ...+ +..| ..+|.-=.|-.. +.|+-.+ +..|.-|++.... ..+.+... .
T Consensus 82 Lrag~~lQiFnl~----~k~k-------lks~~~~e~VvfWkWis~--~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~-~ 146 (1630)
T 1xi4_A 82 LKAGKTLQIFNIE----MKSK-------MKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRH-S 146 (1630)
T ss_pred EecCCeEEEeehH----Hhhh-------hcccccCCCceEEEecCC--CeeEEEc-CCeEEEeccCCCCccHHHHhcc-h
Confidence 3347889999996 2222 2223 245665667643 4455544 3589999996422 22222211 1
Q ss_pred eecccccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEc--CC-CCEEEEEeC--
Q psy17682 210 DLLYHQRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWN--WD-GSKLLTTCK-- 278 (490)
Q Consensus 210 ~~~~~~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~~~-- 278 (490)
.+. ...|..-..+++.+.++++|= -.|.+.+|..+.+ ..+.+.+|......+... +. ...++.+..
T Consensus 147 ~L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 147 SLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred hcc--cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 111 345667777888875555553 3477888887543 334455665444333332 11 123332222
Q ss_pred -CCeEEEEeCCCC---ceee------eeee--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682 279 -DKKMRIINPRTG---AIEE------EAVC--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD 346 (490)
Q Consensus 279 -dg~i~iwd~~~~---~~~~------~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~ 346 (490)
.+.++|.++... .+.. .+.. ........+..++...++..-+ .-|.++++|+.++.+.....- .
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it---k~G~~~~~d~~t~~~i~~~ri-s 299 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNRI-S 299 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe---cCceEEEEecccchhhhhccc-c
Confidence 378999998543 1111 0111 1122255666776644444444 589999999999876554331 1
Q ss_pred CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682 347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP 382 (490)
Q Consensus 347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~ 382 (490)
...|...+.+....-+ ++....|.|.--.+....
T Consensus 300 -~~~iF~~~~~~~~~g~-~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 300 -GETIFVTAPHEATAGI-IGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred -CCceEEeccCCCCCce-EEEcCCceEEEEEEccch
Confidence 2334333333333333 233466666655555543
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.06 E-value=4 Score=39.07 Aligned_cols=106 Identities=11% Similarity=0.160 Sum_probs=60.3
Q ss_pred eeEEEEeCCCc--EEEEEeCCCceeEEEEecCCCCC--CCeEEE-e-cc------CCCceeeeeecCC---CCeEEEEec
Q psy17682 304 ATRAIYLKSGL--IFTTGFSKMSERQYSLRAPDHLD--EPIVMV-E-LD------TSNGVMFPLYDPD---TNLVYLCGK 368 (490)
Q Consensus 304 ~~~~~~s~~~~--~l~~~~~~~~~~~i~iwd~~~~~--~~~~~~-~-~~------~~~~i~~~~~s~~---~~~l~~~g~ 368 (490)
...++|.|+|. +|++- ..+.|++++..... .++.-. . +. ...+...++|+|+ ..+||++-+
T Consensus 16 P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred ceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 78999999985 77765 47889999754321 111111 0 11 1356888999997 445656543
Q ss_pred CC------------CeEEEEEecCCCC------eeEEeeeee---CCCceeeEEEeeCceeEEeec
Q psy17682 369 GD------------SVIRYFEITAEPP------FVHYINTFQ---TPDPQRGIGMMPKRGCDVNSC 413 (490)
Q Consensus 369 ~d------------g~i~iwd~~~~~~------~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~ 413 (490)
.+ ..|.-|.+..+.+ -.+.+.... ....-..|+|.|||.+.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 21 1444466643210 011111111 224568899999998766653
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=88.09 E-value=24 Score=35.76 Aligned_cols=204 Identities=9% Similarity=0.002 Sum_probs=99.2
Q ss_pred EEEEE-EeeCCCCEEEEEeCCC----cEEEEECCCCeeEEE-Ee-cCCC------cEEEEEEcCCCCEEEEEe-------
Q psy17682 218 VGLVL-WHPTAQNVLLTAGSDN----NVAIWNVGTGEIMIQ-IE-CHPD------IVYSASWNWDGSKLLTTC------- 277 (490)
Q Consensus 218 v~~~~-~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~------- 277 (490)
...+. ++|+++..+++-+..| .++++|+.+++.+.. +. ..+. ....++|..++.++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34555 7888875666555444 699999999886531 11 0001 113447764333333211
Q ss_pred ---CCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeCCCc-----EEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682 278 ---KDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLKSGL-----IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT 347 (490)
Q Consensus 278 ---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~~~~-----~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~ 347 (490)
....|+.|.+.+... ...+.............++++. .+++.+.+.....+.+.+...............
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 125688898876532 2223333333234455566655 344433222346677777653222211111121
Q ss_pred CCceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCC------CeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682 348 SNGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEP------PFVHYINTFQTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 348 ~~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 412 (490)
.. .+..+.++.+++.+.+ ..+.|...++.++. .-.+.+-.......+.++.|..+..++...
T Consensus 291 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 367 (711)
T 4hvt_A 291 DA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATY 367 (711)
T ss_dssp TC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEE
T ss_pred cc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEE
Confidence 11 1233445555533322 35678888987642 111222122233467888888875433322
Q ss_pred -cc--eeEEEEecCC
Q psy17682 413 -CE--IGRFFRLNNS 424 (490)
Q Consensus 413 -~~--~~~~~~~~~~ 424 (490)
.. .+.++++.++
T Consensus 368 ~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 368 DNVVAKVVTFTLENE 382 (711)
T ss_dssp ETTEEEEEEECEETT
T ss_pred ECCEEEEEEEECCCC
Confidence 22 3344544444
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.59 E-value=25 Score=32.49 Aligned_cols=151 Identities=10% Similarity=-0.057 Sum_probs=71.5
Q ss_pred CCeeEEEECCCCCCEEEEEeCCC----cEEEEECCCCCcccccccceeeecc--------cccCEEEEEEeeCC-CCEEE
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLY--------HQRRVGLVLWHPTA-QNVLL 232 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~p~~-~~~l~ 232 (490)
..|.+|++.|.+...+..++..| .|... ...++.-..+..+. .+.. +...|.++++.|.. ...+.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP-AFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC-CCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc-cCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 56899999983223444444444 33332 23333322222110 0110 12357889998732 23556
Q ss_pred EEeCCCcEEEEECCCCeeEEEEec-------------------CCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce
Q psy17682 233 TAGSDNNVAIWNVGTGEIMIQIEC-------------------HPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAI 292 (490)
Q Consensus 233 s~~~dg~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 292 (490)
+++..+.|...+ ..++....+.. ....+.+|.++|. ...|..+..++.|...+-. ++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-TSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-CCC
Confidence 655555554443 22333222211 1235789999983 4555656555555544322 222
Q ss_pred eeeeee-cC-----------CCceeEEEEeCC-CcEEEEEe
Q psy17682 293 EEEAVC-HE-----------GSKATRAIYLKS-GLIFTTGF 320 (490)
Q Consensus 293 ~~~~~~-~~-----------~~~~~~~~~s~~-~~~l~~~~ 320 (490)
-..+.. .. +..+..+.+.|. ...+.++.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 111110 00 123778888886 34455554
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=72.81 E-value=90 Score=32.10 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=21.9
Q ss_pred cceeeeEEeccCCCceEEeeeCCCeEEEE
Q psy17682 44 QRRVGLVLWHPTAQNVLLTAGKEAEPILI 72 (490)
Q Consensus 44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iW 72 (490)
.+.|.+|+++|..+..++.++..+.|...
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS 42 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRW 42 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEe
Confidence 35899999999877777777777765443
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=71.43 E-value=97 Score=31.87 Aligned_cols=153 Identities=10% Similarity=0.041 Sum_probs=75.2
Q ss_pred cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc----E
Q psy17682 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN----V 240 (490)
Q Consensus 165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~----v 240 (490)
.+.|.+|+++|.+...++.+...+.|...+ +.++.-..+......-......+.++++.|.....++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999997667777788777765554 33433222211000000023469999999864345555443211 3
Q ss_pred EEEE-CCCCeeEEEEecC---------CCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeee-----cCCCce
Q psy17682 241 AIWN-VGTGEIMIQIECH---------PDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVC-----HEGSKA 304 (490)
Q Consensus 241 ~iwd-~~~~~~~~~~~~~---------~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~ 304 (490)
.||. .+.|+.-..+... ...+..++++|. ...++.+...+.|.. ....++.-..+.. .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 3443 3344433333210 113556888874 345666654443322 2222222111111 111237
Q ss_pred eEEEEeCC-CcEEEEE
Q psy17682 305 TRAIYLKS-GLIFTTG 319 (490)
Q Consensus 305 ~~~~~s~~-~~~l~~~ 319 (490)
..+.++|. +..+.++
T Consensus 172 ~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 172 TSVIFDPERNGTIYAS 187 (789)
T ss_dssp EEEEECTTSTTCEEEE
T ss_pred EEEEECCCCCCEEEEE
Confidence 78888875 3344444
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=71.20 E-value=16 Score=36.04 Aligned_cols=59 Identities=20% Similarity=0.206 Sum_probs=46.1
Q ss_pred EEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682 261 VYSASWNWDGSKLLTTCKD------------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319 (490)
Q Consensus 261 v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 319 (490)
.-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+..+.+..++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4679999999966665432 3467778888888777778888889999999999877655
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.64 E-value=78 Score=34.22 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=31.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682 261 VYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV 297 (490)
Q Consensus 261 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 297 (490)
+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455666788899999999999999999999888765
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.56 E-value=1e+02 Score=32.50 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=31.7
Q ss_pred CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe
Q psy17682 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE 255 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 255 (490)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777777776 489999999999999999999887754
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=65.07 E-value=1.2e+02 Score=30.64 Aligned_cols=230 Identities=11% Similarity=0.088 Sum_probs=111.4
Q ss_pred eeEEE-ECCCCCCEEEEEeCCC----cEEEEECCCCCcccccccceeeecccc-----cCEEEEEEeeCCCCEEEEE---
Q psy17682 168 VLDIA-WSPHDDNVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLYHQ-----RRVGLVLWHPTAQNVLLTA--- 234 (490)
Q Consensus 168 V~~~~-~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~~l~s~--- 234 (490)
...+. ++|++...+++-+..| .++++|+.+++.+..--.|. ... .....++|..++ .++++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~----~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~ 205 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPI----TNSGKLLEGKFTYPTWINKD-TIIFNLVLH 205 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCB----CTTCCBCCEETCCEEEEETT-EEEECCCCS
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccc----cccccccccccceeeEECCC-EEEEEeCCC
Confidence 33455 8898855555544443 69999999887654210010 000 011345787444 244432
Q ss_pred -------eCCCcEEEEECCCCe--eEEEEecCCCc-EEEEEEcCCCCE-----EEEEeC---CCeEEEEeCCCCc-eeee
Q psy17682 235 -------GSDNNVAIWNVGTGE--IMIQIECHPDI-VYSASWNWDGSK-----LLTTCK---DKKMRIINPRTGA-IEEE 295 (490)
Q Consensus 235 -------~~dg~v~iwd~~~~~--~~~~~~~~~~~-v~~~~~~~~~~~-----l~~~~~---dg~i~iwd~~~~~-~~~~ 295 (490)
+....|+.|.+.+.. -...+.+.... -.....++++++ +++.+. ...+++.|..... ....
T Consensus 206 ~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (711)
T 4hvt_A 206 KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK 285 (711)
T ss_dssp TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE
T ss_pred CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE
Confidence 122568889876542 23334433333 234555666662 444332 2456777765321 1222
Q ss_pred eeecCCCceeEEEEeCCCcEEEEEeCC-------CceeEEEEecCCCC-------CCCeEEEeccCCCceeeeeecCCCC
Q psy17682 296 AVCHEGSKATRAIYLKSGLIFTTGFSK-------MSERQYSLRAPDHL-------DEPIVMVELDTSNGVMFPLYDPDTN 361 (490)
Q Consensus 296 ~~~~~~~~~~~~~~s~~~~~l~~~~~~-------~~~~~i~iwd~~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~ 361 (490)
+..... ..+..+.++.+++....+ ...+.|...++... .....+........+..+.+..+
T Consensus 286 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 360 (711)
T 4hvt_A 286 INMPSD---ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-- 360 (711)
T ss_dssp CCSCTT---CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--
T ss_pred eecCCc---ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--
Confidence 322222 122344566665533211 02445777777653 12222233333445777777765
Q ss_pred eEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce
Q psy17682 362 LVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG 407 (490)
Q Consensus 362 ~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~ 407 (490)
.|+++...++ .+.++++.+++-..+.+..+.....+..+..++++.
T Consensus 361 ~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~ 408 (711)
T 4hvt_A 361 RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEE 408 (711)
T ss_dssp CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCS
T ss_pred EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCC
Confidence 4556666666 466777766530011101122223455566666654
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=63.48 E-value=42 Score=32.84 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=45.4
Q ss_pred CcEEEEEEcCCCCEEEEEeC------------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682 259 DIVYSASWNWDGSKLLTTCK------------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF 320 (490)
Q Consensus 259 ~~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 320 (490)
.....|.|.++|.+.+.... ...+..++..+++....+.......++.++|+||++.|.+.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34678999999987774332 126788888888876666555555689999999998877664
No 362
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=52.30 E-value=2e+02 Score=29.13 Aligned_cols=206 Identities=11% Similarity=0.018 Sum_probs=0.0
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC-------CcEEEEEEcC-CCCEEEEEeCCCe------
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP-------DIVYSASWNW-DGSKLLTTCKDKK------ 281 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~-~~~~l~~~~~dg~------ 281 (490)
+.|..|+++|..+..++++...+.|...+ ..++.-..+..+. ..|.+++++| +.+.++++.....
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Q ss_pred -EEEEeCCCCceeeeeeecCCC---------ceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC--
Q psy17682 282 -MRIINPRTGAIEEEAVCHEGS---------KATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS-- 348 (490)
Q Consensus 282 -i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-- 348 (490)
..||....+-...+....... .+..++++|. ...+.++. ..+.-.....+.+..-.....+...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~---~~g~gl~~S~DgG~tW~~~~~~~~~~~ 178 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT---RCGNGLWRSTDYGVTWSKVESFPNPGT 178 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC---STTCCEEEESSTTSSCEECTTCCCCCC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee---ccCCcEEEeCCCCcceecccCCCCCcc
Q ss_pred -------------CceeeeeecCCCCe------EEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeE
Q psy17682 349 -------------NGVMFPLYDPDTNL------VYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCD 409 (490)
Q Consensus 349 -------------~~i~~~~~s~~~~~------l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l 409 (490)
.++..+.++|.... .+..+..++.-.||.-.++-...+.+...........+.++|++.+.
T Consensus 179 ~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~ 258 (737)
T 2cn3_A 179 YIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLY 258 (737)
T ss_dssp CBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEE
T ss_pred cccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEE
Q ss_pred Eeec---------ceeEEEEecCCC
Q psy17682 410 VNSC---------EIGRFFRLNNSG 425 (490)
Q Consensus 410 ~~~~---------~~~~~~~~~~~~ 425 (490)
++.. ....+|+...+.
T Consensus 259 ~~~~d~~g~y~~~~~g~v~~s~d~G 283 (737)
T 2cn3_A 259 ITYGDTCGPYDGNGKGQVWKFNTRT 283 (737)
T ss_dssp EEEESSCCSSCCSCCEEEEEEETTT
T ss_pred EEecCCCCccccccCceEEEEeCCC
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=45.51 E-value=34 Score=34.43 Aligned_cols=37 Identities=5% Similarity=0.111 Sum_probs=30.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee
Q psy17682 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC 298 (490)
Q Consensus 260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 298 (490)
.|.++.+ +..++++-+.|.++|+||+++++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555555 377999999999999999999998877664
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=44.50 E-value=1.6e+02 Score=25.59 Aligned_cols=231 Identities=11% Similarity=-0.009 Sum_probs=116.7
Q ss_pred CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682 136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ 215 (490)
Q Consensus 136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (490)
+|.+..|-.. ..+++..+.. ....|..++.... ..++. . ||.|..|-......+.. |.. -.
T Consensus 41 ~G~v~~wG~n----~~Gqlg~p~~----~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~---P~~----~~ 101 (282)
T 3qhy_B 41 GGKVLGWGAN----LNGQLTMPAA----TQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTV---PAE----AR 101 (282)
T ss_dssp TTEEEEEECC----SSSTTSCCGG----GGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCC---CGG----GS
T ss_pred CCEEEEEeCC----CCCCCCCCcc----CCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCC---Ccc----cC
Confidence 8999999766 4444432221 2346778887642 33444 4 89999998654433221 111 13
Q ss_pred cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE 295 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 295 (490)
..|..++.... ..+.-. ||.|..|-......+..-......|..++...+ +.+.-. ||.++.|-......+..
T Consensus 102 ~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~ 174 (282)
T 3qhy_B 102 SGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV 174 (282)
T ss_dssp SSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC
T ss_pred CCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC
Confidence 46777776644 233334 899999976542211111112345777766433 233334 79999997664322211
Q ss_pred eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682 296 AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY 375 (490)
Q Consensus 296 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i 375 (490)
.......+..++......+++ . ++.+..|-.....+.-.. ......|..++.... ..+ +. . ||.|+.
T Consensus 175 -p~~~~~~v~~i~~G~~hs~al--~----~G~v~~wG~n~~gqlg~p--~~~~~~v~~i~~G~~-h~~-al-~-~g~v~~ 241 (282)
T 3qhy_B 175 -PAEAQSGVDDVAGGIFHSLAL--K----DGKVIAWGDNRYKQTTVP--TEALSGVSAIASGEW-YSL-AL-K-NGKVIA 241 (282)
T ss_dssp -CGGGGSSEEEEEECSSEEEEE--E----TTEEEEEECCTTSTTCCC--GGGGSSCCEEEECSS-CEE-EE-E-TTEEEE
T ss_pred -ceecCCCeEEEEecCCEEEEE--E----CCeEEEEECCCCCCCCCC--cccCCCceEEEcCCC-EEE-EE-E-CCEEEE
Confidence 111112255555443333322 3 567777765443222110 011234555554432 233 22 3 899999
Q ss_pred EEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682 376 FEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS 412 (490)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 412 (490)
|-.....+. . ....|.+++-.....+.++.
T Consensus 242 wG~n~~gq~----~---v~~~v~~iaaG~~h~~al~~ 271 (282)
T 3qhy_B 242 WGSSRTAPS----S---VQSGVSSIEAGPNAAYALKG 271 (282)
T ss_dssp ESTTCCCCG----G---GSSCEEEEEECSSCEEEEEC
T ss_pred ecCCCCccc----c---CCCCcEEEEECcCeEEEEec
Confidence 977664422 1 12356666666665554443
No 365
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=42.35 E-value=2e+02 Score=26.18 Aligned_cols=101 Identities=7% Similarity=-0.032 Sum_probs=50.7
Q ss_pred CEEEEEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC----cEEEEECCCCeeEEE
Q psy17682 179 NVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN----NVAIWNVGTGEIMIQ 253 (490)
Q Consensus 179 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~ 253 (490)
..|..|...| +.+++... ++...... .......|.+|++.|.....+.+++..| .|...+ ..++....
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~-----~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~ 95 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRG-----PVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTE 95 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEE-----EESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEE
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECC-----ccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceE
Confidence 4677777776 55555332 22211110 0113456999999983222344554444 343332 23332222
Q ss_pred Eec--------------CCCcEEEEEEcC-C-CCEEEEEeCCCeEEEEe
Q psy17682 254 IEC--------------HPDIVYSASWNW-D-GSKLLTTCKDKKMRIIN 286 (490)
Q Consensus 254 ~~~--------------~~~~v~~~~~~~-~-~~~l~~~~~dg~i~iwd 286 (490)
+.. ....|.++++.| + ...+.+++..+.|...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 211 112577899987 2 45666666666666554
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=41.02 E-value=2.2e+02 Score=26.18 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=86.3
Q ss_pred cEEEEECCCC--eeEEEEec------CCCcEEEEEEc---CC----CCEEEEEe-CCCeEEEEeCCCCceeeeeee---c
Q psy17682 239 NVAIWNVGTG--EIMIQIEC------HPDIVYSASWN---WD----GSKLLTTC-KDKKMRIINPRTGAIEEEAVC---H 299 (490)
Q Consensus 239 ~v~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~ 299 (490)
+|.+||+.+. +.++++.- ....+..+++. |+ +.++..+. ..+.|.++|+.+++.-+.... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5667888887 77776652 23457788877 22 23433333 467899999998865443320 0
Q ss_pred C--------------CCceeEEEEeCC----CcEEEEEeCCCceeEEEE--ecCCCCCCCeEEEeccCC---Cceeeeee
Q psy17682 300 E--------------GSKATRAIYLKS----GLIFTTGFSKMSERQYSL--RAPDHLDEPIVMVELDTS---NGVMFPLY 356 (490)
Q Consensus 300 ~--------------~~~~~~~~~s~~----~~~l~~~~~~~~~~~i~i--wd~~~~~~~~~~~~~~~~---~~i~~~~~ 356 (490)
. ...+..++++|+ ++.|....-. .....+| -.++.......+...+.. ..-...++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls-s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS-AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS-CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC-CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 112677888887 6666544311 1111122 112221111111212211 22344566
Q ss_pred cCCCCeEEEEecCCCeEEEEEecC-CC--CeeEEeeeeeCCCceeeEEEeeCceeEEe
Q psy17682 357 DPDTNLVYLCGKGDSVIRYFEITA-EP--PFVHYINTFQTPDPQRGIGMMPKRGCDVN 411 (490)
Q Consensus 357 s~~~~~l~~~g~~dg~i~iwd~~~-~~--~~~~~~~~~~~~~~i~~~~~sp~~~~l~~ 411 (490)
++....||++--....|..|+... .- .-...+..-..-....++.+.++|.+-+.
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFM 340 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEE
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEE
Confidence 543334556777788999999875 10 01112221111134566666666544333
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.66 E-value=1.5e+02 Score=28.98 Aligned_cols=61 Identities=15% Similarity=0.078 Sum_probs=41.6
Q ss_pred cCEEEEEEeeCCCCEEEEEeC------------CCcEEEEECCCCeeEEEEec-CCCcEEEEEEcCCCCEEEEEe
Q psy17682 216 RRVGLVLWHPTAQNVLLTAGS------------DNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNWDGSKLLTTC 277 (490)
Q Consensus 216 ~~v~~~~~~p~~~~~l~s~~~------------dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 277 (490)
.....|.|.++|. +.+.... ...+..++..+++....+.. ....++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3467899999985 5552211 12566677777776555543 346789999999998877764
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.36 E-value=91 Score=30.69 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=34.8
Q ss_pred eeeeeecCCCCeEEEEecCC------------CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEe
Q psy17682 351 VMFPLYDPDTNLVYLCGKGD------------SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVN 411 (490)
Q Consensus 351 i~~~~~s~~~~~l~~~g~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~ 411 (490)
.-.|+|+|.|+++ ++-..+ ..+.+.+..+++ +.+.+ .-.....+++++|+||++.+..
T Consensus 478 PDNL~fd~~G~Lw-I~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~-~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLW-ILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFM-VGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEE-EEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEE-ECCTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECCCCCEE-EEecCCCcccccccccccceEEEEeCCCCe-EEEEE-eCCCCccCcCeeECCCCCEEEE
Confidence 4568899999866 432211 234445555554 22222 2234467999999999876544
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=33.80 E-value=2.3e+02 Score=24.46 Aligned_cols=119 Identities=13% Similarity=0.011 Sum_probs=65.8
Q ss_pred cccCEEEEEEeeC-CCCEEEEEeCCCcEEEEECCCC------eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682 214 HQRRVGLVLWHPT-AQNVLLTAGSDNNVAIWNVGTG------EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286 (490)
Q Consensus 214 ~~~~v~~~~~~p~-~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 286 (490)
....|..+.. ++ .+..++..+.+|.++...+..- .....++ ..+.+..+........++..+..|.++.+.
T Consensus 66 ~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 66 REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFS 143 (276)
T ss_dssp TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEE
T ss_pred CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEE
Confidence 3455666644 42 2348889999999999886542 2222233 234566666665666888889999988887
Q ss_pred CCCC-------ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682 287 PRTG-------AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD 334 (490)
Q Consensus 287 ~~~~-------~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~ 334 (490)
...- .-...+.-..+..+..+...+++..++..+..+....+.+-++.
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~ 198 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIP 198 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSC
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcc
Confidence 5321 11111222223345555555555566666643333333333333
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=33.35 E-value=22 Score=38.47 Aligned_cols=38 Identities=18% Similarity=0.247 Sum_probs=30.0
Q ss_pred CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT 205 (490)
Q Consensus 167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 205 (490)
.+.+++..++. .++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44555666655 799999999999999999998876543
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=32.48 E-value=76 Score=31.99 Aligned_cols=37 Identities=14% Similarity=0.375 Sum_probs=29.0
Q ss_pred CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec
Q psy17682 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC 256 (490)
Q Consensus 217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 256 (490)
.|.++.+. . .++++-+.|.++|+|++++++++.+..-
T Consensus 223 ~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555443 3 4899999999999999999998887664
No 372
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=29.14 E-value=1.6e+02 Score=21.22 Aligned_cols=15 Identities=20% Similarity=-0.093 Sum_probs=10.3
Q ss_pred eEEEEeCCCcEEEEE
Q psy17682 305 TRAIYLKSGLIFTTG 319 (490)
Q Consensus 305 ~~~~~s~~~~~l~~~ 319 (490)
..+.+..+|.+++..
T Consensus 59 ~~l~l~~dGNLVl~d 73 (113)
T 3mez_B 59 CFMRLGHSGELDITD 73 (113)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEEeCCCcEEEEC
Confidence 456777788877654
No 373
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=28.70 E-value=2.8e+02 Score=23.89 Aligned_cols=119 Identities=14% Similarity=0.094 Sum_probs=70.9
Q ss_pred cCCeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 165 KGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 165 ~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
...|..+.. ++ .+.+++..+.+|.++...+..-. .+.-......+. ..+.+..+......+ .++..+..|.+..+
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~~G~~~i~lk-egD~l~~~~~~~~~~-~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YKAQGMPIIKLT-EGDEVVSIASSVDET-HILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TCSTTEECSCCC-TTCCEEEEEECCSSC-EEEEEETTSEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hhcCCeEEEecC-CCCEEEEEEEeCCCC-EEEEEECCCEEEEE
Confidence 345555533 32 23689999999999999876543 111000011122 234555555554443 67777888998888
Q ss_pred ECCC---------CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy17682 244 NVGT---------GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR 288 (490)
Q Consensus 244 d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 288 (490)
+... |.....+. ....|..+...+++..++..+..|.++...+.
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 7532 22222233 23556666655566788888999998888764
No 374
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=26.00 E-value=3.2e+02 Score=23.56 Aligned_cols=219 Identities=11% Similarity=-0.100 Sum_probs=105.2
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV 245 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~ 245 (490)
..|..++.... ..++. . ||.|..|-......+.. |. .....|..++.... +.++. . ||.|..|-.
T Consensus 24 ~~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~---p~----~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~ 88 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTM---PA----ATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGG 88 (282)
T ss_dssp SSCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSC---CG----GGGSCCCEEEECSS--EEEEE-E-TTEEEEEEC
T ss_pred CCCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCC---Cc----cCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeC
Confidence 36777776542 23333 5 89999998654433221 11 12235666666543 23444 4 899999976
Q ss_pred CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE 325 (490)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 325 (490)
.....+..-..-...|..++...+ +.+.-. +|.|+.|-......+.. .......+..++......+++ .+
T Consensus 89 n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~~~~l------~~ 158 (282)
T 3qhy_B 89 NEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYTALAV------KN 158 (282)
T ss_dssp CTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEEEEE------ET
T ss_pred CCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCEEEEE------EC
Confidence 532111110111346777776533 444445 89999997664322111 111112244444333222221 13
Q ss_pred eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682 326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK 405 (490)
Q Consensus 326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 405 (490)
+.+..|-.....+.-... .....|..++...+ +.++. .||.|+.|-......+..... ....|..++-...
T Consensus 159 G~v~~wG~n~~gqlg~p~--~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~~gqlg~p~~---~~~~v~~i~~G~~ 229 (282)
T 3qhy_B 159 GGVIAWGDNYFGQTTVPA--EAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNRYKQTTVPTE---ALSGVSAIASGEW 229 (282)
T ss_dssp TEEEEEECCTTSTTSCCG--GGGSSEEEEEECSS--EEEEE--ETTEEEEEECCTTSTTCCCGG---GGSSCCEEEECSS
T ss_pred CEEEEecCCCCCCCCCce--ecCCCeEEEEecCC--EEEEE--ECCeEEEEECCCCCCCCCCcc---cCCCceEEEcCCC
Confidence 556666554322211100 11234666654432 33233 489999998765432211111 1124566665555
Q ss_pred ceeEEeecceeEEE
Q psy17682 406 RGCDVNSCEIGRFF 419 (490)
Q Consensus 406 ~~~l~~~~~~~~~~ 419 (490)
..++++ ++.+..|
T Consensus 230 h~~al~-~g~v~~w 242 (282)
T 3qhy_B 230 YSLALK-NGKVIAW 242 (282)
T ss_dssp CEEEEE-TTEEEEE
T ss_pred EEEEEE-CCEEEEe
Confidence 555555 4433333
No 375
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=25.16 E-value=4.8e+02 Score=25.38 Aligned_cols=151 Identities=9% Similarity=0.076 Sum_probs=76.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeeeee------------e-------c----CCCce-eEEEEeCCCcEEEEEeCCCcee
Q psy17682 271 SKLLTTCKDKKMRIINPRTGAIEEEAV------------C-------H----EGSKA-TRAIYLKSGLIFTTGFSKMSER 326 (490)
Q Consensus 271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~------------~-------~----~~~~~-~~~~~s~~~~~l~~~~~~~~~~ 326 (490)
..++.|+.||.++.+|.. ++.+..+. . | .+.++ ..+.+...-+.++.++-....+
T Consensus 86 ~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG~ 164 (570)
T 3hx6_A 86 PRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGK 164 (570)
T ss_dssp CEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSCS
T ss_pred cEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCCc
Confidence 578889999999999887 54433221 0 1 01111 2222221123334443222355
Q ss_pred EEEEecCCCCCCCeEEEeccCC--------CceeeeeecCCCCeEEEEecC------CCeEEEEEecCCCCeeEEeeeee
Q psy17682 327 QYSLRAPDHLDEPIVMVELDTS--------NGVMFPLYDPDTNLVYLCGKG------DSVIRYFEITAEPPFVHYINTFQ 392 (490)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~g~~------dg~i~iwd~~~~~~~~~~~~~~~ 392 (490)
.++..|+.....+..+.++... -.--.+.--.+++++++.|+. ...|+|.|+.++..+ ..+..-.
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li-~~i~~~~ 243 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAIT-RKLEVTG 243 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEE-EEEEECC
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceE-EEEecCC
Confidence 6777787765555555544311 011122223467776666643 458999999998733 3332111
Q ss_pred C---CCceeeEEEe---eCc--eeEEeecceeEEEEecC
Q psy17682 393 T---PDPQRGIGMM---PKR--GCDVNSCEIGRFFRLNN 423 (490)
Q Consensus 393 ~---~~~i~~~~~s---p~~--~~l~~~~~~~~~~~~~~ 423 (490)
. ...+..++.. .|+ ..+.+++-..++|+++-
T Consensus 244 ~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl 282 (570)
T 3hx6_A 244 RTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDL 282 (570)
T ss_dssp STTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEEC
T ss_pred CCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEc
Confidence 1 1122233222 233 34666777778888654
No 376
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=24.07 E-value=5.8e+02 Score=25.89 Aligned_cols=118 Identities=11% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce-----eeecccccCEEEEEEeeCCCCEEEEEeCC---
Q psy17682 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV-----VDLLYHQRRVGLVLWHPTAQNVLLTAGSD--- 237 (490)
Q Consensus 166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--- 237 (490)
+.|.+|.++|.+...++.+...|.|...+ ..++.-..+..+. ..-......+.+++++|.....++.+...
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Q ss_pred ---CcEEEEECCCCeeEEEEe---------cCCCcEEEEEEcC-CCCEEEEEeCCCeEEE
Q psy17682 238 ---NNVAIWNVGTGEIMIQIE---------CHPDIVYSASWNW-DGSKLLTTCKDKKMRI 284 (490)
Q Consensus 238 ---g~v~iwd~~~~~~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i 284 (490)
+...+...+.|+.-..+. ........++++| +...+.++...+.|..
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~ 159 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR 159 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=21.22 E-value=4.4e+02 Score=23.43 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=71.5
Q ss_pred CCeeEEEECCC--CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682 166 GPVLDIAWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW 243 (490)
Q Consensus 166 ~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw 243 (490)
..|.++...++ .+.+++..+.+|.|+.-.+..-...+.-......+.. .+.+..+......+ .++..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d-~ill~T~~G~~~rf 172 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGD-DLLLVSANGQSIRF 172 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTC-EEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCC-EEEEEECCCeEEEE
Confidence 44555533321 2378999999999999887643322210000111222 34455555544443 67777788988888
Q ss_pred ECC--C---------CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy17682 244 NVG--T---------GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR 288 (490)
Q Consensus 244 d~~--~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 288 (490)
... . |.....+. ....|.++...+++..++..+..|.++.-.+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred ECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 765 2 11111232 34567777766667789999999999887764
Done!