RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17682
(490 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 81.7 bits (200), Expect = 1e-17
Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
GH+ + I + P + N A+GS+D +++ + T + + V
Sbjct: 224 GHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHD-----NIICGITSVS 277
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
+ + +LL D N +W+ + + H + V DG + T D +
Sbjct: 278 FSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 283 RI 284
+I
Sbjct: 337 KI 338
Score = 57.4 bits (137), Expect = 1e-09
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 9/81 (11%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
+ +++S ++ +G +D VW + L H RV +
Sbjct: 269 IICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAG-------HDNRVSCLGV 320
Query: 224 HPTAQNVLLTAGSDNNVAIWN 244
+ T D+ + IWN
Sbjct: 321 TDD-GMAVATGSWDSFLKIWN 340
Score = 51.7 bits (122), Expect = 8e-08
Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 47/305 (15%)
Query: 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPST---APNTGRINADHALVGGHKGPVLD 170
+E+ ++ K +IR + A + L + ++ L G H +
Sbjct: 2 SELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRG-HLAKIYA 60
Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRRVGLVLWHPTA 227
+ W D ++ S S+D + +W + + V+ Y +
Sbjct: 61 MHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119
Query: 228 QNVLLTAGS----------------------------------DNNVAIWNVGTGEIMIQ 253
+ + D A+W++ TG+
Sbjct: 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179
Query: 254 IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG 313
H V S S D ++ D ++ + R G + HE + +G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNG 238
Query: 314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI 373
F TG + R + LRA L + V F L+ L G D
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF---SKSGRLL-LAGYDDFNC 294
Query: 374 RYFEI 378
++
Sbjct: 295 NVWDA 299
Score = 48.2 bits (113), Expect = 1e-06
Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 7/153 (4%)
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
+ ++ D + +W+V G H + + + +G+ T D
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Query: 283 RIINPRTGAIEEEAVCHEGSKATRAI-YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV 341
R+ + R ++ + KSG + G+ + + D
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-----RA 305
Query: 342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR 374
V N V D V G DS ++
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAV-ATGSWDSFLK 337
Score = 47.0 bits (110), Expect = 3e-06
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
GH V + + D +A+GS D +K+W
Sbjct: 310 GHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 77.5 bits (189), Expect = 4e-16
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 153 RINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP----- 207
R+++++ GHK V + ++ D + SGS D VK+W + + P
Sbjct: 242 RLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 208 VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS---- 263
V + H+ V V +L+ D V W+ +G ++ ++ H + V S
Sbjct: 301 EVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 359
Query: 264 --ASWNWDGSKLLTTCKDKKMRI 284
+S + + T D K RI
Sbjct: 360 NGSSLGPEYNVFATGSGDCKARI 382
Score = 70.2 bits (170), Expect = 1e-13
Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
SP D IA+GS D V+VW G + L H+ V V++ ++
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVV 270
Query: 233 TAGSDNNVAIWNVGTGE------------IMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
+ D +V +WN+ + H D V S + + +L+ KD+
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 281 KMRIINPRTGAIEEEAVCHEGS 302
+ + ++G H S
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNS 352
Score = 56.3 bits (134), Expect = 3e-09
Identities = 23/85 (27%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRRVGL 220
HK VL +A + +D I SGS+D V W G L V+ +
Sbjct: 307 HKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG---- 361
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNV 245
P NV T D IW
Sbjct: 362 SSLGPE-YNVFATGSGDCKARIWKY 385
Score = 47.9 bits (112), Expect = 2e-06
Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 43/238 (18%)
Query: 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189
+ ++ ++ L S A + + + +SP D +A+G+ED +
Sbjct: 87 VYRVSDGSLVARLSDDSAANKDPENLNTSSS-PSSDLYIRSVCFSP-DGKFLATGAEDRL 144
Query: 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL--------------------------- 222
+++W I + I L D+
Sbjct: 145 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 204
Query: 223 -------WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-------HPDIVYSASWNW 268
P + D V +W+ TG ++ +++ H D VYS +
Sbjct: 205 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 264
Query: 269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER 326
DG +++ D+ +++ N + + ++ + + ++ E
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 322
Score = 44.8 bits (104), Expect = 2e-05
Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 25/286 (8%)
Query: 141 ILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI 200
IL P+ P + +L H V + +S D +A+G + +V+++ DG +
Sbjct: 41 ILYNPAL-PREIDVELHKSL--DHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSL 95
Query: 201 SRTLTE-----------PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249
L++ + V + P + + G+++ +
Sbjct: 96 VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA--TGAEDRLIRIWDIENR 153
Query: 250 IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY 309
++ I + + + L + + I + E T A+
Sbjct: 154 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 213
Query: 310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT--SNGVMFPLYDPDTNLVYLCG 367
G G + R + ++ E T + V ++ D V + G
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSG 272
Query: 368 KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC 413
D ++ + + +TP+ V S
Sbjct: 273 SLDRSVKLWNLQNANNKSDS----KTPNSGTCEVTYIGHKDFVLSV 314
Score = 42.5 bits (98), Expect = 8e-05
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 163 GHKGPVLDIAWSPH-----DDNVIASGSEDCVVKVWQI 195
GH+ V+ +A + + NV A+GS DC ++W+
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 36.3 bits (82), Expect = 0.006
Identities = 10/100 (10%), Positives = 27/100 (27%), Gaps = 5/100 (5%)
Query: 167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT 226
P + + ++ + + R + + L H V V +
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYILY---NPALPREIDVELHKSLDHTSVVCCVKFSND 73
Query: 227 AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW 266
+ L G + ++ V G ++ ++
Sbjct: 74 GE--YLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN 111
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 75.5 bits (184), Expect = 1e-15
Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 8/155 (5%)
Query: 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189
+ + +++ + L + + + + S + SGS D
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249
+K+W + G TL H V VL+H +L+ D + +W+
Sbjct: 229 IKMWDVSTGMCLMTLVG-------HDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKR 280
Query: 250 IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRI 284
M + H V S ++ ++T D+ +++
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Score = 70.2 bits (170), Expect = 7e-14
Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 50/264 (18%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDL-------- 211
GH+ PV + + P +V+ S SED +KVW G RTL T+ V D+
Sbjct: 15 GHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 73
Query: 212 -----------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG 248
++ + + +++A D + +W V TG
Sbjct: 74 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 133
Query: 249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI 308
+ H + V N DG+ + + D+ +R+ T + E H +
Sbjct: 134 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193
Query: 309 YLKSGLIFTTGFSKMSERQY--------------SLRAPDHLDEPIVMVELDTSNGVMFP 354
+S + + ++ +++ D +M + N V
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253
Query: 355 LYDPDTNLVYLCGKGDSVIRYFEI 378
L+ + L D +R ++
Sbjct: 254 LFHSGGKFI-LSCADDKTLRVWDY 276
Score = 67.8 bits (164), Expect = 4e-13
Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 13/152 (8%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE------------PVVD 210
GH+ V + + D +IAS S D V+VW + L E
Sbjct: 141 GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199
Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG 270
+ LL+ D + +W+V TG ++ + H + V ++ G
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259
Query: 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS 302
+L+ DK +R+ + + + HE
Sbjct: 260 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 291
Score = 47.8 bits (112), Expect = 1e-06
Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)
Query: 191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI 250
K W IP L+ H+ V V++HP +V+++A D + +W+ TG+
Sbjct: 1 KEW-IPRPPEKYALSG-------HRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDF 51
Query: 251 MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL 310
++ H D V S++ G L + D +++ + + H+ + ++ +I
Sbjct: 52 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111
Query: 311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370
I + K + + V V + D L+ C D
Sbjct: 112 NGDHIVSASRDKTI------KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-ND 164
Query: 371 SVIRYFEI 378
+R + +
Sbjct: 165 QTVRVWVV 172
Score = 45.5 bits (106), Expect = 7e-06
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194
H+ V + + + +GS D VKVW+
Sbjct: 287 AHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317
Score = 44.0 bits (102), Expect = 2e-05
Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 35/225 (15%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
+ + I S S D +K+W++ G +T T H+ V +V + ++
Sbjct: 108 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-------HREWVRMVRPNQD-GTLIA 159
Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD--------------------GSK 272
+ +D V +W V T E ++ H +V SW + G
Sbjct: 160 SCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 219
Query: 273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA 332
LL+ +DK +++ + TG V H+ + I + K +LR
Sbjct: 220 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK------TLRV 273
Query: 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE 377
D+ ++ + + V + V D ++ +E
Sbjct: 274 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS-VDQTVKVWE 317
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 64.1 bits (154), Expect = 1e-11
Identities = 18/178 (10%), Positives = 45/178 (25%), Gaps = 23/178 (12%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL-----LYHQRR 217
H + ++ + S S D +KVW + L+H
Sbjct: 12 AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----------ECHPDIVYSASWN 267
+ + ++ T ++ + + + ++ + ++ W
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128
Query: 268 WDG-----SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF 320
+L+ T I A E ++ S + + F
Sbjct: 129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Score = 47.9 bits (112), Expect = 2e-06
Identities = 15/154 (9%), Positives = 37/154 (24%), Gaps = 26/154 (16%)
Query: 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYH 214
H H + I + ++A+ S + ++I ++ + ++D
Sbjct: 59 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMK 118
Query: 215 QRRVGLVLWHP----TAQNVLLTAGSDNNVAIWNVGTGEIMIQI---------------- 254
+ + W + L+ IW
Sbjct: 119 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178
Query: 255 --ECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
S + G + T + ++I
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISE 211
Score = 41.4 bits (95), Expect = 2e-04
Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 8/148 (5%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
HD N + +I + ++ + H V + ++ + L
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLC 305
Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVY----SASWNWDGSKLLTT---CKDKKMRII 285
+AG D + W+V T E + + H D + + + G L +
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365
Query: 286 NPRTGAIEEEAVCHEGSKATRAIYLKSG 313
GA E++C + + ++G
Sbjct: 366 RSGMGADLNESLCCVCLDRSIRWFREAG 393
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 60.6 bits (145), Expect = 1e-10
Identities = 9/106 (8%), Positives = 29/106 (27%), Gaps = 5/106 (4%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
K + DI P +++ S D + V++ + L + L ++ +
Sbjct: 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCN 63
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
+ + + ++ + + +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICK 109
Score = 48.3 bits (113), Expect = 1e-06
Identities = 28/155 (18%), Positives = 45/155 (29%), Gaps = 10/155 (6%)
Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE--- 206
+ G K + D+A P + A S D V V D G ++
Sbjct: 178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237
Query: 207 -----PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV 261
+ V + + P L TAGSD ++ WN+ T + + +
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS 296
Query: 262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA 296
+ L D + IE A
Sbjct: 297 -VVKIACSDNILCLATSDDTFKTNAAIDQTIELNA 330
Score = 42.9 bits (99), Expect = 5e-05
Identities = 9/101 (8%), Positives = 31/101 (30%), Gaps = 22/101 (21%)
Query: 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG 248
+V++ Q P IS + P+ +++LL D ++ ++
Sbjct: 3 IVQIEQAPKDYISD------------------IKIIPS-KSLLLITSWDGSLTVYKFDIQ 43
Query: 249 EIMIQIEC---HPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
+ + + + ++ + + + +
Sbjct: 44 AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84
Score = 36.8 bits (83), Expect = 0.005
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 251 MIQI-ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKA 304
++QI + D + S LL T D + + A + + K
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH 57
Score = 36.8 bits (83), Expect = 0.005
Identities = 8/45 (17%), Positives = 15/45 (33%)
Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194
+ N D +K P+L + + D I G+ +
Sbjct: 41 DIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 60.6 bits (145), Expect = 1e-10
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
P+ AW+ D IA + V +++ + L H +V V W
Sbjct: 6 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHE-----LKEHNGQVTGVDW 59
Query: 224 HPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
P N ++T G+D N +W + + + W
Sbjct: 60 APD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 103
Score = 47.9 bits (112), Expect = 2e-06
Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
W+ + + +++ V I+ + + +++ H V W D ++++T D+
Sbjct: 15 WNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR 73
Query: 281 KMRIINP 287
+
Sbjct: 74 NAYVWTL 80
Score = 46.4 bits (108), Expect = 4e-06
Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
H G V + W+P D N I + D VW + TL R +
Sbjct: 49 EHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVI------LRINRAARCV 101
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQIECHPDIVYSASWNWDGSKLLTTCK 278
+ ++I + V S W+ + L
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161
Query: 279 DKKMRIINPRTGAIE 293
D K RI + +E
Sbjct: 162 DFKCRIFSAYIKEVE 176
Score = 38.7 bits (88), Expect = 0.001
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 3/47 (6%)
Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDN---VIASGSEDCVVKVWQI 195
G A L HK V I+ + D + +W +
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Score = 37.5 bits (85), Expect = 0.003
Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 11/140 (7%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
G V + + + + +A S D V + T + L+
Sbjct: 199 SSCGWVHGVCF-SANGSRVAWVSHDSTVCLADADKKMAVAT---------LASETLPLLA 248
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
++ L+ AG D ++ + + D+ +S ++ DKK
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 283 RIINPRTGAIEEEAVCHEGS 302
+++ H+ S
Sbjct: 309 SSEGSAAAGAGLDSL-HKNS 327
Score = 36.0 bits (81), Expect = 0.009
Identities = 5/52 (9%), Positives = 17/52 (32%)
Query: 257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI 308
+ + +WN D +++ + ++ I + E + +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGV 57
Score = 35.6 bits (80), Expect = 0.012
Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 39/127 (30%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVW-------------------QIPDGGISRTL 204
P+L + + + +++A+G DC ++ Q G++
Sbjct: 242 ETLPLLAVTFIT-ESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 299
Query: 205 TEPVVDLLY---------------HQRRVGLVLWHPTAQN---VLLTAGSDNNVAIWNVG 246
+D H+ V + + T G D ++IW+V
Sbjct: 300 RFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Query: 247 TGEIMIQ 253
+ E ++
Sbjct: 360 SLESALK 366
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 55.4 bits (131), Expect = 4e-09
Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 9/106 (8%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
GH + ++ S D + S + + W I G +R + H + +
Sbjct: 10 GHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDV------HATMITGIK 62
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
+ L T D+++ + G + +
Sbjct: 63 TTS--KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Score = 47.3 bits (110), Expect = 2e-06
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
D+ +A+GS D V VW + + + + V V+W + ++
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK----GAHAMSSVNSVIWLN--ETTIV 284
Query: 233 TAGSDNNVAIWNV 245
+AG D+N+ WNV
Sbjct: 285 SAGQDSNIKFWNV 297
Score = 41.9 bits (96), Expect = 1e-04
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196
N + V + W ++ I S +D +K W +P
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIW--LNETTIVSAGQDSNIKFWNVP 298
Score = 38.8 bits (88), Expect = 0.001
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKD 279
L T DN+V +WN+ I+I+ V S W + + +++ +D
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQD 289
Query: 280 KKMRI 284
++
Sbjct: 290 SNIKF 294
Score = 35.7 bits (80), Expect = 0.010
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
H + + S + DG L + + + + TG
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTG 44
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 55.2 bits (131), Expect = 5e-09
Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 11/122 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
+ + + P + + V + H+ V +
Sbjct: 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH---------LHESCVLSLK 272
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
+ ++ G DN + W G + Q + V S + D ++T DKK
Sbjct: 273 FAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKA 330
Query: 283 RI 284
+
Sbjct: 331 TV 332
Score = 54.8 bits (130), Expect = 8e-09
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 10/82 (12%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
H+ VL + ++ S +D ++ W+ P G V
Sbjct: 264 HESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK--------ESSSVLSCDI 314
Query: 224 HPTAQNVLLTAGSDNNVAIWNV 245
++T D ++ V
Sbjct: 315 SVD-DKYIVTGSGDKKATVYEV 335
Score = 50.6 bits (119), Expect = 2e-07
Identities = 21/132 (15%), Positives = 35/132 (26%), Gaps = 7/132 (5%)
Query: 137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196
Q + P P R +A H V + S + +G + C VKVW I
Sbjct: 24 QPVPFPPDALIGPGIPR-HARQINTLNHGEVVCAVTISN-PTRHVYTGGKGC-VKVWDIS 80
Query: 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC 256
G +++ +D L + P L G + +
Sbjct: 81 HPGNKSPVSQ--LDCLNRDNYIRSCKLLPDGC--TLIVGGEASTLSIWDLAAPTPRIKAE 136
Query: 257 HPDIVYSASWNW 268
+
Sbjct: 137 LTSSAPACYALA 148
Score = 30.9 bits (68), Expect = 0.29
Identities = 11/101 (10%), Positives = 30/101 (29%), Gaps = 5/101 (4%)
Query: 213 YHQRRVG---LVLWHPTAQNVLL-TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
Y Q +G +H TA + + + + I H ++V + + +
Sbjct: 2 YFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISN 61
Query: 269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY 309
+ + T +++ + + + I
Sbjct: 62 PT-RHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIR 101
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 52.6 bits (124), Expect = 3e-08
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
D ++ AS D + ++ DG + + + + H V + W P +
Sbjct: 196 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIA 254
Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDI-VYSASWNWDGSKLLTTCKDKKMRIINP 287
+A +D + IWNV T ++ I I W L++ + + +NP
Sbjct: 255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 44.1 bits (102), Expect = 2e-05
Identities = 12/87 (13%), Positives = 22/87 (25%), Gaps = 3/87 (3%)
Query: 214 HQRRVGLVL-WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSK 272
R +VL P + + +V VG+ H A + G
Sbjct: 15 TARGTAVVLGNTPAGDKIQ--YCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72
Query: 273 LLTTCKDKKMRIINPRTGAIEEEAVCH 299
+ +RI + +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIP 99
Score = 34.1 bits (76), Expect = 0.030
Identities = 8/36 (22%), Positives = 10/36 (27%), Gaps = 1/36 (2%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198
H SP ASG V++W
Sbjct: 56 EHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQT 90
Score = 31.8 bits (70), Expect = 0.17
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 251 MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKAT 305
++ H V+ +W+ DG+K+ + DK ++I N T +E+ +
Sbjct: 231 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 285
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 52.5 bits (124), Expect = 3e-08
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 21/134 (15%)
Query: 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVG 219
V G IA + D ++ SGS D +++W I G R +
Sbjct: 170 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV----------LEGHEE 219
Query: 220 LVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---------IMIQIECHPDIVYSASWNWDG 270
LV +++ D + +W++ + + H V+ + D
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 277
Query: 271 SKLLTTCKDKKMRI 284
+++++ D + I
Sbjct: 278 FQIVSSSHDDTILI 291
Score = 47.5 bits (111), Expect = 1e-06
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL--TEPVVDLLYH 214
A + +G + D+ I SG+ D +KVW + R T + L+ H
Sbjct: 207 CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 266
Query: 215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244
RV + + ++++ D+ + IW+
Sbjct: 267 SGRVFRLQFDE---FQIVSSSHDDTILIWD 293
Score = 40.6 bits (93), Expect = 3e-04
Identities = 29/253 (11%), Positives = 65/253 (25%), Gaps = 23/253 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
V + + DD I SG D +K+W R LT H V +
Sbjct: 13 ETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTG-------HTGSVLCLQ 62
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
+ + ++ + + ++ ++T KD+ +
Sbjct: 63 YDER-----VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 117
Query: 283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342
+ + + G +A + + + + ++ + V
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF-----VR 172
Query: 343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM 402
G+ Y + G D+ IR ++I + R
Sbjct: 173 TLNGHKRGIACLQYRDRL---VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 229
Query: 403 MPKRGCDVNSCEI 415
G ++
Sbjct: 230 RIVSGAYDGKIKV 242
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 52.4 bits (124), Expect = 5e-08
Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 10/149 (6%)
Query: 158 HALVGGHKGPVLDIAWSPHDDNV-IASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR 216
H+ +L DD A+ + G
Sbjct: 199 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA------DLTE 252
Query: 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT 276
L P N G N +A +++ +++ Y +++ G KL
Sbjct: 253 LYFTGLRSPKDPNQ--IYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLG 309
Query: 277 CKDKKMRIINPRTGAIEEEAVCHEGSKAT 305
+ + NP T + G +T
Sbjct: 310 GTFNDLAVFNPDTLEKVKNIKLPGGDMST 338
Score = 40.9 bits (94), Expect = 2e-04
Identities = 6/98 (6%), Positives = 23/98 (23%), Gaps = 7/98 (7%)
Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV 230
A + + + V + + ++ P + G + P +
Sbjct: 2 PALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMP------DKFGPGTAMMAPDNRTA 54
Query: 231 LLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
+ ++ ++ T + +
Sbjct: 55 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY 92
Score = 33.9 bits (76), Expect = 0.036
Identities = 9/168 (5%), Positives = 32/168 (19%), Gaps = 14/168 (8%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
+ GP +P + + + + + R +
Sbjct: 36 MPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS-SVPGEVGRSMYS 93
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----ECHPDIVYSASWNWDGSKLLTT 276
P + + + +++ + L+
Sbjct: 94 FAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 152
Query: 277 CKDKK-------MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT 317
D + ++ +TG ++ +
Sbjct: 153 ADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 200
Score = 33.9 bits (76), Expect = 0.037
Identities = 8/73 (10%), Positives = 18/73 (24%), Gaps = 2/73 (2%)
Query: 230 VLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTC-KDKKMRIINP 287
++ NN+ + +V + + +A D + I+
Sbjct: 10 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 69
Query: 288 RTGAIEEEAVCHE 300
T A
Sbjct: 70 DTCKNTFHANLSS 82
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 52.6 bits (124), Expect = 5e-08
Identities = 31/303 (10%), Positives = 79/303 (26%), Gaps = 17/303 (5%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
GH V+ +DN + +G++D +++V+ + L+ H V +
Sbjct: 10 GHMTSVIT-CLQF-EDNYVITGADDKMIRVYDSINKKFLLQLSG-------HDGGVWALK 60
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGT--GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
+ +L++ +D V +W++ + + + ++T +D
Sbjct: 61 YAHG--GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 281 KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340
+ + +V G + + + + S+R +
Sbjct: 119 TLHVWKLPKE----SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 174
Query: 341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI 400
V D + V ++ Y T + D + G
Sbjct: 175 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234
Query: 401 GMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADE 460
M +G + + S + + + +
Sbjct: 235 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD 294
Query: 461 WFA 463
Sbjct: 295 NIL 297
Score = 47.6 bits (111), Expect = 2e-06
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
H + I DN++ SGS + ++ + G + ++L ++ V +
Sbjct: 280 HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA------NILKDADQIWSVNF 332
Query: 224 HPTAQNVLLTAGSDNNVAIW 243
+ ++ D +
Sbjct: 333 KG--KTLVAAVEKDGQSFLE 350
Score = 43.3 bits (100), Expect = 4e-05
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 213 YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGS 271
YH + + + N +L +GS+N I+N+ +G+ + I D ++S ++ +
Sbjct: 279 YHHTNLSAITTFYVSDN-ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKT 336
Query: 272 KLLTTCKDKKMRI 284
+ KD + +
Sbjct: 337 LVAAVEKDGQSFL 349
Score = 39.1 bits (89), Expect = 8e-04
Identities = 4/36 (11%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
HA + + + + ++A+ +D +
Sbjct: 317 HANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 51.4 bits (121), Expect = 1e-07
Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
GH+ + N++ SG+ D VK+W I + + L + V
Sbjct: 215 GHQSLTSGMELKD---NILVSGNADSTVKIWDIKT-------GQCLQTLQGPNKHQSAVT 264
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIM-----IQIECHPDIVYSASWNWDGSKLLTTC 277
+N ++T+ D V +W++ TGE + ++ +V+ +
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 324
Query: 278 KDKKMRI 284
++
Sbjct: 325 RNGTEET 331
Score = 51.0 bits (120), Expect = 2e-07
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 15/169 (8%)
Query: 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH 224
+G + D + SGS D ++VW + G TLT HQ +
Sbjct: 174 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-------GHQSLTSGMELK 226
Query: 225 PTAQNVLLTAGSDNNVAIWNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMR 283
N+L++ +D+ V IW++ + + ++ + ++T+ D ++
Sbjct: 227 D---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Query: 284 IINPRTGAIEEEAVCHEGSKATRAIY----LKSGLIFTTGFSKMSERQY 328
+ + +TG V E + ++ + L+ G +E
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 332
Score = 49.8 bits (117), Expect = 3e-07
Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 45/276 (16%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDL-------- 211
GH V+ N I SGS+D +KVW G RTL T V
Sbjct: 14 GHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 71
Query: 212 -------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI 252
V + +++ D + +W++ TG+ +
Sbjct: 72 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 131
Query: 253 QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS 312
+ H V +DG ++++ D +++ +P T H +
Sbjct: 132 VLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---D 186
Query: 313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSV 372
G+ +G S R + + + + L + + N++ + G DS
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-------MELKDNIL-VSGNADST 238
Query: 373 IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC 408
++ ++I + +
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274
Score = 42.5 bits (98), Expect = 7e-05
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS 302
W G + ++ H D V + + G+++++ D +++ + TG V H G
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Score = 42.1 bits (97), Expect = 1e-04
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI 252
W+ + + L H V + N +++ DN + +W+ TG+ +
Sbjct: 1 WRRGELKSPKVLKG-------HDDHV-ITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLR 51
Query: 253 QIECHPDIVYSASWNWD 269
+ H V+S+ +
Sbjct: 52 TLVGHTGGVWSSQMRDN 68
Score = 39.0 bits (89), Expect = 0.001
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
+ N + + S+D VK+W + G R L ++ V + T ++
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL--VTLESGGSGGVVWRIRASNT--KLVC 320
Query: 233 TAGSDNNVAIWNVGTGEIMIQI 254
GS N GT E + +
Sbjct: 321 AVGSRN-------GTEETKLLV 335
Score = 35.6 bits (80), Expect = 0.013
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 162 GGHKGPVLDIAWSPHDDNVIASGSED----CVVKVW 193
GG G V I S V A GS + + V
Sbjct: 302 GGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVL 336
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 50.7 bits (119), Expect = 1e-07
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV 230
+++++A+GS D + ++ + + + L H+ V +LW +
Sbjct: 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPM------KIIKALNAHKDGVNNLLWET--PST 271
Query: 231 LLTAGSDNNVAIWNV 245
L+++G+D + WNV
Sbjct: 272 LVSSGADACIKRWNV 286
Score = 45.3 bits (105), Expect = 7e-06
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195
HK V ++ W + + S D +K W +
Sbjct: 256 AHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
Score = 42.6 bits (98), Expect = 5e-05
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198
GH + + +P + SGS D + W
Sbjct: 11 GHNKGITALTVNP-----LISGSYDGRIMEWSSSSM 41
Score = 41.5 bits (95), Expect = 1e-04
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 233 TAGSDNNVAIWNVGTGEIMIQI-ECHPDIVYSASWNWDGSKLLTTCKDKKMRI 284
T D N+ I++V +I+ H D V + W L+++ D ++
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKR 283
Score = 36.9 bits (83), Expect = 0.004
Identities = 8/65 (12%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS 265
E + + H + + + +P L++ D + W+ + + H +++ S
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLD 53
Query: 266 WNWDG 270
+
Sbjct: 54 NSKAQ 58
Score = 28.8 bits (62), Expect = 1.4
Identities = 6/45 (13%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
G E++ I H + + + + L++ D ++ + +
Sbjct: 1 GHDEVLKTISGHNKGITALTV----NPLISGSYDGRIMEWSSSSM 41
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 50.7 bits (119), Expect = 2e-07
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
S D A+ D ++VW + + T L Q V T ++
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWT-----LDKQQLGNQQVGVVATGNGRII 312
Query: 233 TAGSDNNVAIWNV 245
+ D + + +
Sbjct: 313 SLSLDGTLNFYEL 325
Score = 49.5 bits (116), Expect = 4e-07
Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 30/157 (19%)
Query: 140 SILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199
I+PP P+T R +++ P + + + V+ D
Sbjct: 7 EIIPP---QPSTQR------------NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK 51
Query: 200 ISRTLTEPVVDLLYHQ-RRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTGEIMIQIEC- 256
PVV H V V + P L + V +W + +E
Sbjct: 52 -----VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN 106
Query: 257 -------HPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
+ SW+++G +L + + +
Sbjct: 107 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143
Score = 44.1 bits (102), Expect = 2e-05
Identities = 13/125 (10%), Positives = 37/125 (29%), Gaps = 8/125 (6%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
V D+ +SP + + D + + G + + + +
Sbjct: 203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA----- 257
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW---DGSKLLTTCKD 279
T G+D + +W+V T + + + + + ++++ D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 280 KKMRI 284
+
Sbjct: 318 GTLNF 322
Score = 39.1 bits (89), Expect = 0.001
Identities = 4/35 (11%), Positives = 12/35 (34%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195
+ + + + I S S D + +++
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 31.0 bits (68), Expect = 0.33
Identities = 9/83 (10%), Positives = 23/83 (27%), Gaps = 3/83 (3%)
Query: 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS 302
+ + + + A D K T D +R+ + T ++ +
Sbjct: 236 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 295
Query: 303 KATRAI---YLKSGLIFTTGFSK 322
+ + +G I +
Sbjct: 296 LGNQQVGVVATGNGRIISLSLDG 318
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 50.2 bits (118), Expect = 2e-07
Identities = 12/123 (9%), Positives = 33/123 (26%), Gaps = 10/123 (8%)
Query: 170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN 229
+ D + + + + G ++ +P
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI------MDVFYFSTAVNPAKT- 253
Query: 230 VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT 289
G+ N + +++ + ++ P YS + + DGS + + + T
Sbjct: 254 --RAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310
Query: 290 GAI 292
Sbjct: 311 LEK 313
Score = 40.9 bits (94), Expect = 2e-04
Identities = 17/162 (10%), Positives = 43/162 (26%), Gaps = 13/162 (8%)
Query: 228 QNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRI 284
++ +L + + + + + +I I G T K + +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 285 INPRTGAIEEEAVCHEGSKATRAIY----------LKSGLIFTTGFSKMSERQYSLRAPD 334
I+ TG + ++++ L E Q + A
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF 376
+ + + + D + +Y G+ V+
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE 162
Score = 37.1 bits (84), Expect = 0.004
Identities = 13/117 (11%), Positives = 38/117 (32%), Gaps = 10/117 (8%)
Query: 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN 238
+ I + + + V + + +T + + P + T
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIA-----DAGPTPMVPMVAPGGRIAYATVNKSE 56
Query: 239 NVAIWNVGTGEIMIQIECHPDI-----VYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
++ ++ TGE + +I+ ++ A+ + DG L ++ + +
Sbjct: 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113
Score = 35.9 bits (81), Expect = 0.009
Identities = 10/118 (8%), Positives = 30/118 (25%), Gaps = 18/118 (15%)
Query: 158 HALVGGHKGPVLDIAWSPHDDNVIASGSE---------DCVVKVWQIPDGGISRTLTEPV 208
+ G + D ++ V++ + + + +
Sbjct: 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP--- 277
Query: 209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW 266
V + G+ ++A ++ T E Q++ + S +
Sbjct: 278 -----LPHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLAS 329
Score = 30.5 bits (67), Expect = 0.40
Identities = 12/136 (8%), Positives = 32/136 (23%), Gaps = 12/136 (8%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
+ + +P A+ ++ + + G + + +
Sbjct: 29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--LGRIDLSTPEERVKSLFG 86
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM----------IQIECHPDIVYSASWNWDG 270
P + + + + + P + +W DG
Sbjct: 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146
Query: 271 SKLLTTCKDKKMRIIN 286
SKL +D +
Sbjct: 147 SKLYGLGRDLHVMDPE 162
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 46.5 bits (109), Expect = 4e-06
Identities = 14/152 (9%), Positives = 28/152 (18%), Gaps = 7/152 (4%)
Query: 145 PSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL 204
G + D A + A G V+V+ +
Sbjct: 53 AGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112
Query: 205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA 264
P RV ++ ++ +L + A +V +
Sbjct: 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHP 172
Query: 265 SWNW-------DGSKLLTTCKDKKMRIINPRT 289
S +
Sbjct: 173 GAAATHYLGSCPASLAASDLAAAPAAAGIVGA 204
Score = 33.4 bits (75), Expect = 0.050
Identities = 5/96 (5%), Positives = 23/96 (23%), Gaps = 1/96 (1%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
+A + D ++ E + + + +
Sbjct: 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDA 318
Query: 221 VLWHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIE 255
++ + + + I++ + + +E
Sbjct: 319 IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 44.9 bits (104), Expect = 1e-05
Identities = 29/219 (13%), Positives = 65/219 (29%), Gaps = 15/219 (6%)
Query: 172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231
+SP D ++IA S + + G + R+ V +
Sbjct: 9 DFSPLDGDLIAFVSRG-QAFIQDV-SGTYVLKVP--------EPLRIRYVRRGGDTKVAF 58
Query: 232 LTAGSDNN-VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
+ + + + I++ TG+ + E + V++ + +G + ++ ++ TG
Sbjct: 59 IHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117
Query: 291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH---LDEPIVMVELDT 347
E I S I K E + H ++ +
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH 386
++ P +D D+ +Y + F
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 216
Score = 42.2 bits (97), Expect = 1e-04
Identities = 11/128 (8%), Positives = 28/128 (21%), Gaps = 6/128 (4%)
Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
D + S + S + + P +
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244
Query: 233 TAGSDNNVAIWNV------GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
N++ + G ++I +E I + + + +
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 304
Query: 287 PRTGAIEE 294
+T + E
Sbjct: 305 VKTRKVTE 312
Score = 41.4 bits (95), Expect = 2e-04
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVV 209
K + D+ S D + +D + + + RT+ P+V
Sbjct: 312 EVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360
Score = 36.8 bits (83), Expect = 0.005
Identities = 7/89 (7%), Positives = 22/89 (24%), Gaps = 14/89 (15%)
Query: 163 GHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
+ +L + H E V+ + + + + D
Sbjct: 271 PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV-KTRKVTEVKNNLTD---------- 319
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249
+ + ++ D + + + E
Sbjct: 320 LRLSADRK-TVMVRKDDGKIYTFPLEKPE 347
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 39.9 bits (92), Expect = 5e-04
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
Query: 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL-TAGSDNNVAIWNVGTGEIM 251
W +P+ S + D L N+ T +A+ + + +I+
Sbjct: 2 WGMPEMRESWKVLVKPEDRPKK------QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIV 55
Query: 252 IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA 296
I+ V+ + + G LL +D ++ +I+ + A
Sbjct: 56 KVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 99
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 38.3 bits (87), Expect = 0.001
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGA 291
+N+++ +V + ++ I + A + DG+K+ + II+ T
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 292 IEEEAVCHEG 301
+
Sbjct: 66 VIATVPAGSS 75
Score = 33.3 bits (74), Expect = 0.058
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL 204
A + P IA +P V + S V V I+ T+
Sbjct: 238 ARIPVGPDPA-GIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 31.8 bits (70), Expect = 0.19
Identities = 7/46 (15%), Positives = 15/46 (32%)
Query: 205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI 250
T + + + P + V + N V++ + T I
Sbjct: 233 TNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278
Score = 27.5 bits (59), Expect = 4.1
Identities = 5/38 (13%), Positives = 10/38 (26%), Gaps = 1/38 (2%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198
+ P+ SP V + + V +
Sbjct: 28 IPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATN 64
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 38.6 bits (88), Expect = 0.001
Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 13/119 (10%)
Query: 151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
G V H+ I + + V V G
Sbjct: 244 DGWRPGGWQQVAYHRALDR-IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE----- 297
Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECH---PDIVYSAS 265
+ + + +L + D + I + +GE + + P ++ +A
Sbjct: 298 ---MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 34.0 bits (76), Expect = 0.037
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 8/94 (8%)
Query: 180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN 239
V + E + VW + G LT + ++ +V ++ P + + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEG---ALT--LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 240 VAIWNVGTGE---IMIQIECHPDIVYSASWNWDG 270
V + + + P + S + G
Sbjct: 61 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQG 94
Score = 31.7 bits (70), Expect = 0.20
Identities = 26/264 (9%), Positives = 61/264 (23%), Gaps = 6/264 (2%)
Query: 227 AQNVLLTAGSDNNVAIWNVGTGEIM--IQIECHPDIVYSASWNWDGSKLLTTCKDKK--- 281
Q V + + + +WN+ + Q+ P V + D L + +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 62
Query: 282 -MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340
RI GS + + +F ++ + L +
Sbjct: 63 AYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD 122
Query: 341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI 400
V+ LD + + + L + + T R +
Sbjct: 123 VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 182
Query: 401 GMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADE 460
P E+ + V + ++ D
Sbjct: 183 VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 242
Query: 461 WFAGNELFQDDLYPDTVGDTAALT 484
+ + +V + ++
Sbjct: 243 HLYACDRTASLITVFSVSEDGSVL 266
Score = 30.2 bits (66), Expect = 0.55
Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
G V + SP + + V ++I + T + +
Sbjct: 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES----ALPGSLTHIS 89
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIM--IQIECHPDIVYSASWNW 268
Q V + + + NV++ + G + + + D +SA+ +
Sbjct: 90 TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISP 137
Score = 26.7 bits (57), Expect = 6.8
Identities = 7/56 (12%), Positives = 14/56 (25%), Gaps = 5/56 (8%)
Query: 157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI--PDGGISRTLTEPVVD 210
+IA+G + + V++I G + V
Sbjct: 270 GFQPTETQ---PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQ 322
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 34.0 bits (77), Expect = 0.040
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 221 VLWHPTAQNVLL-TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD 279
+ +N+ T +A+ + T EI ++ V+ + + G L +D
Sbjct: 24 QMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRD 82
Query: 280 KKMRIINPRTGAIEEEA 296
K+ +I+ A
Sbjct: 83 GKVNMIDLWMKEPTTVA 99
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 31.9 bits (71), Expect = 0.14
Identities = 7/104 (6%), Positives = 22/104 (21%), Gaps = 17/104 (16%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG--------------ISRTLTEPV 208
W P + + G ++
Sbjct: 205 LLTDAERAEGWRP-GGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVA 263
Query: 209 VDLLYHQ--RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI 250
L Q + + + + + +++ + + TG +
Sbjct: 264 RWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLVVMDARTGAL 307
Score = 26.9 bits (58), Expect = 5.3
Identities = 9/170 (5%), Positives = 27/170 (15%), Gaps = 33/170 (19%)
Query: 149 PNTGRINADHALVGGHKGPVLDIAWSPHD-DNVIASGSEDCVVKVWQIPDGGISRTLT-- 205
G+ + + V+ +
Sbjct: 145 DANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWS 204
Query: 206 ---EPVVDLLYHQRRVGLVLWHP-------------------TAQNVLLTAGSDNNVAIW 243
+ + + V +
Sbjct: 205 LLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVAR 264
Query: 244 NVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAI 292
+ + + S + D + +++ RTGA+
Sbjct: 265 WDLAQQKVEPLV-------SIQVSEDDKPLFYGLTATSDLVVMDARTGAL 307
>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific
cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId:
203496]}
Length = 427
Score = 29.8 bits (65), Expect = 0.85
Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS-RTLTEPVVDLLYHQRRVGLVLWH 224
G + I P +++ + ++ ++ G L + + + +
Sbjct: 12 GYITGIVAHPKTKDLLYARTDI--GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALD 69
Query: 225 PTAQNVLLTAGSDNNVAIWN 244
P + L A W
Sbjct: 70 PNNPDRLYLAQGRYVGDEWA 89
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 29.2 bits (64), Expect = 1.3
Identities = 54/449 (12%), Positives = 124/449 (27%), Gaps = 85/449 (18%)
Query: 13 LTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGKEAEPIL 71
+T ++ F+ F++ + +++ + +Y +++ + LW+ T + +L GK+ E +
Sbjct: 5 VTVEDLFSEDFKIHDPEAKWISDT--EFIYREQKGTVRLWNVETNTSTVLIEGKKIESLR 62
Query: 72 IS------------LKDGYIPPSEKSKSALKV-----TKRSNVLDKVGGKGGANRNSTAN 114
P + S + V LD + +
Sbjct: 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWG 122
Query: 115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWS 174
++ E +QA+ ++ + +D + WS
Sbjct: 123 PKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGL-SDWLYEEEILKTHIAHWWS 181
Query: 175 PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA 234
P + + D V + ++P S T YH + G +
Sbjct: 182 PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP----YHYPKAG-------------SE 224
Query: 235 GSDNNVAIWNVGTGEIMIQIECHPDIV----YSASWNW-DGSKLLTTC-----KDKKMRI 284
++ + + +++ D Y W +K+ T + +
Sbjct: 225 NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284
Query: 285 INPRTGA----IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR-------AP 333
+ TG E+E+ + ++ K G F + + P
Sbjct: 285 CDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP 344
Query: 334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR------------------- 374
+ ++ I + + YD N +Y D R
Sbjct: 345 NSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSC 404
Query: 375 -------YFEITAEPPFVHYINTFQTPDP 396
YF + ++ + P
Sbjct: 405 DLVENCTYFSASFSHSMDFFLLKCEGPGV 433
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 28.3 bits (62), Expect = 2.2
Identities = 25/231 (10%), Positives = 57/231 (24%), Gaps = 20/231 (8%)
Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV 230
+ + P + + ++ + + G L V + HPT +
Sbjct: 150 MVFDPTETYLYSADLTANKLWTHRKLASG-EVELVGSVDAPDPGDHPRWVA-MHPTGNYL 207
Query: 231 LLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
+ N + + + M H + + + +
Sbjct: 208 YALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267
Query: 291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG 350
+ +K Y+ F E+Q L SN
Sbjct: 268 YM---FASSRANKFELQGYI---AGFKLRDCGSIEKQLFLSP--------TPTSGGHSNA 313
Query: 351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIG 401
V + + + + + E F+H + + P+P G+
Sbjct: 314 VSP--CPWSDEWMAITDDQEGWLEIYRWKDE--FLHRVARVRIPEPGFGMN 360
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 27.8 bits (60), Expect = 2.6
Identities = 8/57 (14%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC 277
+L +P + +++ ++ +G +I + ++ +A + DG K+
Sbjct: 4 LLLNPDIHGDRIIFVCCDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRV 59
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 27.4 bits (59), Expect = 4.6
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Query: 236 SDNNVAIWNVGTGEIMI-----QIECHPDIVYSASWNWDGSKLLTTCKDKK 281
+NN+ ++N G + + + S + DG +L K
Sbjct: 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK 84
>d3brda3 b.42.7.1 (A:381-541) DNA-binding protein LAG-1 (CSL)
{Caenorhabditis elegans [TaxId: 6239]}
Length = 161
Score = 26.7 bits (59), Expect = 4.9
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389
D LVYLC D +I+ + TA H IN
Sbjct: 118 FQMIDNELVYLCLSHDKIIQ-HQATAINEHRHQIN 151
>d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast
fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 267
Score = 26.9 bits (59), Expect = 5.9
Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 8/108 (7%)
Query: 262 YSASWNWDGSKL--LTTCK---DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF 316
Y SW+ G L D K+ + + A A + +
Sbjct: 46 YKFSWSSRGVLLALRNAASFYKDGKVTNVAGPELMATAKPYFIYPGFAFVAYPNRDSTPY 105
Query: 317 TT--GFSKMSE-RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN 361
+ + +LR V+V++ + P
Sbjct: 106 KERYQIPEADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIP 153
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 26.6 bits (58), Expect = 7.2
Identities = 17/87 (19%), Positives = 26/87 (29%), Gaps = 10/87 (11%)
Query: 316 FTTGFSKMSERQYSLRA-----PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370
F + K E L D +V D +NG+ PD VY+
Sbjct: 171 FIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINI---SPDGKYVYIAELLA 227
Query: 371 SVIRYFEITAEPP--FVHYINTFQTPD 395
I +E A + ++ D
Sbjct: 228 HKIHVYEKHANWTLTPLRVLSFDTLVD 254
>d2v0fa1 d.76.2.1 (A:2629-2715) Chromodomain-helicase-DNA-binding
protein 7, CHD7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 87
Score = 24.8 bits (54), Expect = 8.1
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 151 TGRINADHALVGGHKGPVLD--IAW-SPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP 207
G+ +GG P + W + + +A D V + +P+ R LT P
Sbjct: 26 NGK------KMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGP 79
Query: 208 VV 209
VV
Sbjct: 80 VV 81
>d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment)
{Escherichia coli [TaxId: 562]}
Length = 410
Score = 26.3 bits (57), Expect = 8.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI 292
E++ ++ + +KL +T DK +INP+TG +
Sbjct: 94 EVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 137
>d1dmla1 d.131.1.2 (A:29-169) UL42 {Human herpesvirus type 1 [TaxId:
10298]}
Length = 141
Score = 25.5 bits (56), Expect = 10.0
Identities = 7/35 (20%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 363 VYLCGKGDSVIR-YFEITAEPPFVHYINTFQTPDP 396
V+ + + R IT + PF + T
Sbjct: 83 VFRANQYPDLRRVELAITGQAPFRTLVQRIWTTTS 117
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.416
Gapped
Lambda K H
0.267 0.0708 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,894,459
Number of extensions: 89174
Number of successful extensions: 403
Number of sequences better than 10.0: 1
Number of HSP's gapped: 332
Number of HSP's successfully gapped: 127
Length of query: 490
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 401
Effective length of database: 1,185,626
Effective search space: 475436026
Effective search space used: 475436026
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.0 bits)