Query psy17688
Match_columns 349
No_of_seqs 556 out of 1593
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 20:22:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 5.2E-49 1.8E-53 331.9 35.0 289 23-349 31-329 (344)
2 4g56_B MGC81050 protein; prote 100.0 8.9E-49 3E-53 332.9 35.6 295 22-349 42-341 (357)
3 1vyh_C Platelet-activating fac 100.0 1E-47 3.4E-52 332.6 39.9 287 16-349 101-409 (410)
4 3ow8_A WD repeat-containing pr 100.0 1.2E-47 4.2E-52 321.1 35.6 283 23-349 33-319 (321)
5 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.1E-47 2.8E-51 319.7 38.0 304 14-349 6-333 (345)
6 2ynn_A Coatomer subunit beta'; 100.0 1.3E-45 4.4E-50 306.9 40.1 291 15-349 5-300 (304)
7 1got_B GT-beta; complex (GTP-b 100.0 1.3E-45 4.5E-50 311.7 40.7 289 13-348 45-340 (340)
8 3iz6_a 40S ribosomal protein R 100.0 4.3E-46 1.5E-50 319.4 34.0 306 10-349 53-373 (380)
9 2pbi_B Guanine nucleotide-bind 100.0 1.5E-44 5E-49 306.7 42.6 292 13-348 54-354 (354)
10 2hes_X YDR267CP; beta-propelle 100.0 1.6E-44 5.5E-49 303.7 34.6 299 14-349 5-326 (330)
11 4ery_A WD repeat-containing pr 100.0 1.4E-43 4.8E-48 296.0 37.5 290 13-349 13-310 (312)
12 1nr0_A Actin interacting prote 100.0 2.9E-43 9.9E-48 319.7 37.3 300 23-349 148-565 (611)
13 1erj_A Transcriptional repress 100.0 8E-43 2.7E-47 300.4 38.1 286 18-349 60-387 (393)
14 3frx_A Guanine nucleotide-bind 100.0 1.2E-42 4.2E-47 290.9 37.5 291 14-349 8-315 (319)
15 1nr0_A Actin interacting prote 100.0 3.5E-42 1.2E-46 312.6 37.4 288 15-349 51-395 (611)
16 1gxr_A ESG1, transducin-like e 100.0 1.8E-41 6.2E-46 285.9 38.8 292 11-349 40-335 (337)
17 2j04_B YDR362CP, TAU91; beta p 100.0 6.6E-43 2.2E-47 308.8 30.8 319 12-349 123-515 (524)
18 2xyi_A Probable histone-bindin 100.0 6.9E-42 2.4E-46 298.1 35.9 321 10-349 33-408 (430)
19 2ynn_A Coatomer subunit beta'; 100.0 5.9E-42 2E-46 284.8 33.1 244 70-349 9-257 (304)
20 2xzm_R RACK1; ribosome, transl 100.0 3.2E-41 1.1E-45 285.2 38.0 298 13-349 11-338 (343)
21 4h5i_A Guanine nucleotide-exch 100.0 4.2E-41 1.5E-45 286.4 38.7 301 15-349 7-341 (365)
22 3ow8_A WD repeat-containing pr 100.0 4.4E-42 1.5E-46 287.4 31.3 247 71-349 29-277 (321)
23 2ymu_A WD-40 repeat protein; u 100.0 5.4E-41 1.8E-45 303.5 39.2 272 23-348 304-577 (577)
24 4gqb_B Methylosome protein 50; 100.0 2.3E-41 8E-46 285.2 34.3 256 15-306 75-333 (344)
25 3i2n_A WD repeat-containing pr 100.0 2.2E-41 7.7E-46 287.7 34.5 293 21-349 17-351 (357)
26 1k8k_C P40, ARP2/3 complex 41 100.0 5E-41 1.7E-45 287.2 35.4 293 21-349 7-359 (372)
27 2pm9_A Protein WEB1, protein t 100.0 2.9E-42 1E-46 299.3 27.8 298 22-349 12-335 (416)
28 2pm7_B Protein transport prote 100.0 1.6E-41 5.6E-46 281.2 29.9 253 71-349 6-283 (297)
29 2pm9_A Protein WEB1, protein t 100.0 3.6E-42 1.2E-46 298.8 26.0 308 15-349 60-412 (416)
30 1vyh_C Platelet-activating fac 100.0 5.6E-41 1.9E-45 290.3 33.3 242 70-349 104-367 (410)
31 3zwl_B Eukaryotic translation 100.0 1.4E-39 4.6E-44 277.8 40.7 298 13-349 22-344 (369)
32 4aow_A Guanine nucleotide-bind 100.0 6E-40 2.1E-44 277.1 38.0 294 17-349 32-335 (340)
33 1r5m_A SIR4-interacting protei 100.0 3.3E-40 1.1E-44 286.9 37.2 303 16-349 39-423 (425)
34 3ei3_B DNA damage-binding prot 100.0 1.8E-40 6.1E-45 285.1 35.0 288 16-349 66-380 (383)
35 1got_B GT-beta; complex (GTP-b 100.0 4.7E-40 1.6E-44 277.7 34.7 249 15-301 89-340 (340)
36 1sq9_A Antiviral protein SKI8; 100.0 4.8E-40 1.6E-44 283.7 34.7 300 16-349 9-393 (397)
37 3k26_A Polycomb protein EED; W 100.0 1E-39 3.5E-44 278.3 36.0 305 12-349 6-364 (366)
38 3dwl_C Actin-related protein 2 100.0 3.6E-41 1.2E-45 288.8 26.8 293 22-349 11-377 (377)
39 4e54_B DNA damage-binding prot 100.0 1.1E-40 3.7E-45 291.0 29.9 285 23-349 120-428 (435)
40 3odt_A Protein DOA1; ubiquitin 100.0 8.5E-39 2.9E-43 266.8 39.3 282 13-349 8-294 (313)
41 2ymu_A WD-40 repeat protein; u 100.0 3.4E-39 1.2E-43 291.7 39.3 280 16-349 255-537 (577)
42 3dm0_A Maltose-binding peripla 100.0 2.3E-39 8E-44 298.6 36.2 290 18-349 377-691 (694)
43 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-39 1.1E-43 273.0 32.6 253 71-348 12-280 (345)
44 1gxr_A ESG1, transducin-like e 100.0 5.3E-39 1.8E-43 270.8 33.1 285 21-349 8-294 (337)
45 3bg1_A Protein SEC13 homolog; 100.0 2.8E-40 9.7E-45 276.2 24.8 255 70-349 9-291 (316)
46 4gga_A P55CDC, cell division c 100.0 4.9E-38 1.7E-42 273.1 39.7 279 23-349 106-393 (420)
47 1erj_A Transcriptional repress 100.0 6.1E-39 2.1E-43 276.2 33.2 252 70-349 60-339 (393)
48 3vl1_A 26S proteasome regulato 100.0 1.3E-39 4.3E-44 283.2 29.2 280 24-349 58-363 (420)
49 4aez_A CDC20, WD repeat-contai 100.0 2.8E-38 9.5E-43 273.0 37.0 278 24-349 95-378 (401)
50 3vl1_A 26S proteasome regulato 100.0 1.1E-38 3.7E-43 277.3 34.3 296 23-349 98-417 (420)
51 4g56_B MGC81050 protein; prote 100.0 5.1E-39 1.7E-43 272.9 30.9 251 18-305 90-344 (357)
52 3gre_A Serine/threonine-protei 100.0 1.8E-39 6.2E-44 283.7 28.4 303 13-348 52-437 (437)
53 3dw8_B Serine/threonine-protei 100.0 1E-38 3.5E-43 279.6 32.3 296 22-348 28-443 (447)
54 2pbi_B Guanine nucleotide-bind 100.0 3E-38 1E-42 268.0 34.0 248 17-301 100-354 (354)
55 2pm7_B Protein transport prote 100.0 2.7E-38 9.4E-43 261.8 32.8 253 23-304 10-285 (297)
56 2xzm_R RACK1; ribosome, transl 100.0 1.7E-38 5.9E-43 268.5 32.2 244 70-349 17-283 (343)
57 2aq5_A Coronin-1A; WD40 repeat 100.0 2.4E-38 8.2E-43 273.6 30.2 289 23-349 35-340 (402)
58 3frx_A Guanine nucleotide-bind 100.0 4.9E-38 1.7E-42 262.9 31.0 243 70-349 13-265 (319)
59 2hes_X YDR267CP; beta-propelle 100.0 9.2E-38 3.1E-42 262.5 32.8 258 70-349 10-278 (330)
60 4ggc_A P55CDC, cell division c 100.0 7.3E-37 2.5E-41 255.8 38.1 279 24-349 27-313 (318)
61 3mmy_A MRNA export factor; mRN 100.0 1.1E-37 3.7E-42 265.9 33.1 290 11-347 27-342 (368)
62 3bg1_A Protein SEC13 homolog; 100.0 2.6E-38 8.9E-43 264.3 28.5 254 22-304 13-293 (316)
63 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-37 8.9E-42 290.2 38.7 289 16-349 6-300 (814)
64 3iz6_a 40S ribosomal protein R 100.0 1.7E-38 5.7E-43 272.3 27.9 261 14-305 99-376 (380)
65 3jrp_A Fusion protein of prote 100.0 2.8E-38 9.7E-43 270.7 29.3 256 70-349 7-285 (379)
66 1yfq_A Cell cycle arrest prote 100.0 1.5E-37 5E-42 262.7 33.2 277 22-343 11-315 (342)
67 1pgu_A Actin interacting prote 100.0 1.5E-36 5.2E-41 276.3 36.0 299 17-349 154-612 (615)
68 4ery_A WD repeat-containing pr 100.0 8.1E-37 2.8E-41 255.0 30.6 242 70-349 19-266 (312)
69 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-36 4.3E-41 297.5 37.0 288 22-349 615-1032(1249)
70 2oaj_A Protein SNI1; WD40 repe 100.0 3.4E-36 1.2E-40 283.0 37.6 309 13-349 8-603 (902)
71 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-36 5E-41 256.8 31.3 262 70-349 7-335 (351)
72 4a11_B DNA excision repair pro 100.0 6.4E-36 2.2E-40 258.5 34.8 288 22-349 43-363 (408)
73 3f3f_A Nucleoporin SEH1; struc 100.0 7.1E-36 2.4E-40 252.6 32.1 264 22-306 11-339 (351)
74 3jrp_A Fusion protein of prote 100.0 4.9E-36 1.7E-40 256.7 29.7 254 17-304 5-287 (379)
75 3v7d_B Cell division control p 100.0 7.2E-35 2.5E-39 256.5 37.2 288 17-349 115-419 (464)
76 3dwl_C Actin-related protein 2 100.0 2.1E-37 7.2E-42 265.4 20.5 248 73-348 10-278 (377)
77 1k8k_C P40, ARP2/3 complex 41 100.0 7E-36 2.4E-40 255.3 29.7 246 72-349 6-272 (372)
78 2j04_B YDR362CP, TAU91; beta p 100.0 1E-36 3.5E-41 269.3 25.1 261 70-349 129-426 (524)
79 2oaj_A Protein SNI1; WD40 repe 100.0 4.4E-36 1.5E-40 282.2 29.8 301 23-349 152-659 (902)
80 3dm0_A Maltose-binding peripla 100.0 9.4E-36 3.2E-40 274.6 31.3 245 70-349 378-630 (694)
81 1p22_A F-BOX/WD-repeat protein 100.0 5.8E-35 2E-39 254.9 34.3 273 23-349 134-412 (435)
82 3jro_A Fusion protein of prote 100.0 1.7E-36 5.8E-41 281.2 25.7 255 70-349 5-283 (753)
83 4aow_A Guanine nucleotide-bind 100.0 6.3E-35 2.2E-39 246.3 32.9 261 53-349 18-284 (340)
84 1pgu_A Actin interacting prote 100.0 3.3E-35 1.1E-39 267.5 33.2 281 22-349 18-326 (615)
85 1sq9_A Antiviral protein SKI8; 100.0 1.5E-35 5.1E-40 255.6 28.5 247 71-349 13-320 (397)
86 2xyi_A Probable histone-bindin 100.0 1.3E-34 4.5E-39 252.1 33.7 268 15-304 121-410 (430)
87 3k26_A Polycomb protein EED; W 100.0 1E-35 3.4E-40 253.6 25.7 253 71-349 15-316 (366)
88 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-35 4E-40 257.1 25.6 267 16-349 9-295 (588)
89 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.5E-34 1.5E-38 250.3 36.0 245 73-348 101-388 (450)
90 3sfz_A APAF-1, apoptotic pepti 100.0 7.6E-36 2.6E-40 292.0 26.4 277 21-349 960-1247(1249)
91 4gq1_A NUP37; propeller, trans 100.0 8.9E-35 3E-39 250.1 29.3 306 16-349 9-387 (393)
92 3i2n_A WD repeat-containing pr 100.0 1.6E-34 5.5E-39 245.4 29.3 251 70-349 14-289 (357)
93 1r5m_A SIR4-interacting protei 100.0 4.5E-34 1.5E-38 248.2 31.8 267 50-349 24-359 (425)
94 4e54_B DNA damage-binding prot 100.0 9.1E-35 3.1E-39 253.6 27.0 248 71-349 116-385 (435)
95 3zwl_B Eukaryotic translation 100.0 1.4E-33 4.7E-38 240.6 33.7 244 69-349 27-302 (369)
96 4gga_A P55CDC, cell division c 100.0 1.2E-33 4E-38 245.5 33.0 243 23-305 148-396 (420)
97 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-33 6.2E-38 264.1 36.5 296 13-349 45-384 (814)
98 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.7E-33 2E-37 243.1 37.1 276 14-349 150-440 (445)
99 3gre_A Serine/threonine-protei 100.0 2.7E-35 9.2E-40 257.3 22.3 278 29-349 34-357 (437)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.6E-33 1.9E-37 243.1 36.7 272 16-349 111-389 (445)
101 4aez_A CDC20, WD repeat-contai 100.0 1.7E-33 5.7E-38 243.1 31.5 242 21-306 133-382 (401)
102 3v7d_B Cell division control p 100.0 4.8E-33 1.6E-37 244.9 34.9 285 13-347 152-459 (464)
103 3ei3_B DNA damage-binding prot 100.0 1.3E-33 4.6E-38 242.3 29.4 244 70-349 69-337 (383)
104 3dw8_B Serine/threonine-protei 100.0 1.6E-34 5.6E-39 252.9 24.0 260 71-349 25-371 (447)
105 1yfq_A Cell cycle arrest prote 100.0 8.7E-34 3E-38 239.6 27.1 243 72-349 9-280 (342)
106 3jro_A Fusion protein of prote 100.0 6.8E-34 2.3E-38 263.8 26.0 248 23-304 10-285 (753)
107 4h5i_A Guanine nucleotide-exch 100.0 3.7E-33 1.3E-37 237.5 28.5 248 23-304 74-343 (365)
108 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-33 9.1E-38 242.0 27.8 254 75-349 35-297 (402)
109 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-32 7.9E-37 227.8 32.1 237 70-349 14-253 (313)
110 3vu4_A KMHSV2; beta-propeller 100.0 7.3E-33 2.5E-37 234.9 27.6 282 16-349 12-334 (355)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-32 7.7E-37 239.5 28.9 245 75-349 5-337 (450)
112 3lrv_A PRE-mRNA-splicing facto 100.0 1.8E-32 6.1E-37 231.7 26.0 266 35-347 47-329 (343)
113 2w18_A PALB2, fancn, partner a 100.0 3.5E-31 1.2E-35 215.7 32.0 298 9-349 21-355 (356)
114 3bws_A Protein LP49; two-domai 100.0 1.9E-31 6.4E-36 232.6 31.9 285 14-349 114-430 (433)
115 4ggc_A P55CDC, cell division c 100.0 7.3E-31 2.5E-35 219.3 33.9 244 23-304 68-315 (318)
116 4a11_B DNA excision repair pro 100.0 6.3E-31 2.1E-35 227.2 31.5 294 21-348 98-402 (408)
117 3vu4_A KMHSV2; beta-propeller 100.0 2.9E-31 9.8E-36 225.1 27.7 231 71-349 16-269 (355)
118 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-32 7.9E-37 231.0 20.7 231 93-349 50-290 (343)
119 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-30 5.8E-35 226.7 31.5 230 72-349 131-363 (435)
120 3mmy_A MRNA export factor; mRN 100.0 3.8E-30 1.3E-34 219.2 30.4 244 71-349 36-302 (368)
121 3bws_A Protein LP49; two-domai 100.0 7.4E-30 2.5E-34 222.5 32.7 290 22-349 60-388 (433)
122 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-31 8.6E-36 230.1 22.1 271 22-340 52-350 (588)
123 1l0q_A Surface layer protein; 100.0 3.5E-29 1.2E-33 215.3 33.3 262 38-349 3-273 (391)
124 1l0q_A Surface layer protein; 100.0 7.1E-29 2.4E-33 213.4 34.2 249 12-305 21-276 (391)
125 4gq1_A NUP37; propeller, trans 100.0 2.5E-30 8.4E-35 222.4 21.9 267 14-304 61-389 (393)
126 2w18_A PALB2, fancn, partner a 100.0 8.6E-29 2.9E-33 201.7 25.1 256 11-303 74-356 (356)
127 1nir_A Nitrite reductase; hemo 100.0 3.1E-26 1.1E-30 203.9 32.6 305 11-349 167-512 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.3E-27 1.1E-31 204.1 25.5 283 23-349 63-385 (415)
129 3hfq_A Uncharacterized protein 100.0 1.2E-25 4.2E-30 190.1 30.9 284 39-348 4-314 (347)
130 1ri6_A Putative isomerase YBHE 100.0 1.5E-25 5.1E-30 189.0 30.8 281 36-349 4-306 (343)
131 3vgz_A Uncharacterized protein 99.9 6.8E-24 2.3E-28 179.7 35.9 290 15-341 33-334 (353)
132 2ecf_A Dipeptidyl peptidase IV 99.9 3.3E-25 1.1E-29 206.0 29.1 284 22-349 36-411 (741)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-24 6.1E-29 187.0 31.2 248 36-333 143-410 (415)
134 1nir_A Nitrite reductase; hemo 99.9 2.7E-24 9.3E-29 191.5 31.3 289 29-349 144-456 (543)
135 2ojh_A Uncharacterized protein 99.9 6.1E-25 2.1E-29 181.2 24.5 255 49-342 20-293 (297)
136 3u4y_A Uncharacterized protein 99.9 4.9E-24 1.7E-28 179.0 30.1 279 29-349 4-302 (331)
137 2z3z_A Dipeptidyl aminopeptida 99.9 2.9E-24 1E-28 198.6 28.6 286 23-349 82-433 (706)
138 1ri6_A Putative isomerase YBHE 99.9 2.8E-23 9.7E-28 175.0 31.5 284 14-333 29-335 (343)
139 1xfd_A DIP, dipeptidyl aminope 99.9 5.7E-25 1.9E-29 203.9 21.7 286 21-349 15-391 (723)
140 2ecf_A Dipeptidyl peptidase IV 99.9 7.4E-24 2.5E-28 196.9 29.2 285 24-348 110-456 (741)
141 3scy_A Hypothetical bacterial 99.9 1.5E-22 5.1E-27 172.1 33.7 291 38-348 14-334 (361)
142 1pby_B Quinohemoprotein amine 99.9 1.9E-23 6.4E-28 175.7 26.9 266 40-349 4-308 (337)
143 2oit_A Nucleoporin 214KDA; NH2 99.9 9.7E-24 3.3E-28 183.1 21.9 217 75-305 37-279 (434)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 9.7E-23 3.3E-27 176.8 28.1 250 24-302 38-331 (434)
145 1k32_A Tricorn protease; prote 99.9 2.3E-23 7.7E-28 200.2 26.2 277 22-348 203-499 (1045)
146 1xfd_A DIP, dipeptidyl aminope 99.9 6.2E-23 2.1E-27 190.2 25.9 291 24-340 62-429 (723)
147 3o4h_A Acylamino-acid-releasin 99.9 1.6E-22 5.4E-27 182.8 26.4 267 22-348 21-312 (582)
148 2z3z_A Dipeptidyl aminopeptida 99.9 7E-23 2.4E-27 189.3 24.3 279 24-341 27-376 (706)
149 2ojh_A Uncharacterized protein 99.9 6.4E-22 2.2E-26 163.0 24.9 216 100-349 23-256 (297)
150 1k32_A Tricorn protease; prote 99.9 7.1E-22 2.4E-26 189.8 27.0 244 72-349 201-459 (1045)
151 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.3E-21 1.8E-25 162.7 28.2 279 39-349 4-339 (365)
152 1jmx_B Amine dehydrogenase; ox 99.9 4.9E-21 1.7E-25 161.7 27.3 282 27-349 4-323 (349)
153 3hfq_A Uncharacterized protein 99.9 2.2E-20 7.6E-25 157.8 30.9 256 21-304 38-317 (347)
154 3u4y_A Uncharacterized protein 99.9 8.1E-21 2.8E-25 159.3 27.9 233 82-349 5-250 (331)
155 3vgz_A Uncharacterized protein 99.9 1.6E-20 5.6E-25 158.8 29.9 237 73-349 39-301 (353)
156 3scy_A Hypothetical bacterial 99.9 2.7E-19 9.2E-24 152.0 36.1 284 21-329 48-360 (361)
157 1pby_B Quinohemoprotein amine 99.9 7E-21 2.4E-25 159.9 25.4 246 13-305 21-311 (337)
158 1z68_A Fibroblast activation p 99.9 3.9E-21 1.3E-25 178.0 21.1 285 25-349 18-389 (719)
159 3o4h_A Acylamino-acid-releasin 99.9 6.2E-21 2.1E-25 172.4 21.8 232 74-349 21-274 (582)
160 3pe7_A Oligogalacturonate lyas 99.9 9.6E-20 3.3E-24 156.2 24.9 277 28-348 41-379 (388)
161 1z68_A Fibroblast activation p 99.8 4.7E-19 1.6E-23 164.1 26.1 299 24-348 61-440 (719)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.7E-18 9.3E-23 146.0 26.6 253 23-304 40-341 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.8 1.1E-18 3.9E-23 161.8 25.9 246 75-348 17-350 (740)
164 4a5s_A Dipeptidyl peptidase 4 99.8 2.8E-18 9.5E-23 159.2 23.8 276 24-340 18-382 (740)
165 3c5m_A Oligogalacturonate lyas 99.8 1.2E-18 4.2E-23 149.7 19.3 274 25-348 38-379 (396)
166 1q7f_A NHL, brain tumor CG1071 99.8 2.2E-16 7.6E-21 129.5 30.2 242 73-349 28-278 (286)
167 1jmx_B Amine dehydrogenase; ox 99.8 3.6E-17 1.2E-21 137.9 25.2 259 13-304 31-325 (349)
168 2oiz_A Aromatic amine dehydrog 99.8 3.4E-16 1.2E-20 132.5 30.8 280 15-333 43-360 (361)
169 3azo_A Aminopeptidase; POP fam 99.8 6.7E-17 2.3E-21 148.3 27.9 285 22-347 23-363 (662)
170 3fvz_A Peptidyl-glycine alpha- 99.8 6E-16 2E-20 129.5 31.3 262 23-304 24-322 (329)
171 3fvz_A Peptidyl-glycine alpha- 99.8 5.7E-16 1.9E-20 129.7 27.1 249 75-349 24-320 (329)
172 1q7f_A NHL, brain tumor CG1071 99.8 2.2E-15 7.6E-20 123.5 28.3 238 23-304 30-280 (286)
173 2dg1_A DRP35, lactonase; beta 99.8 2.2E-15 7.6E-20 126.3 28.1 268 23-341 6-300 (333)
174 3azo_A Aminopeptidase; POP fam 99.7 5.3E-16 1.8E-20 142.3 24.4 242 27-302 81-365 (662)
175 2gop_A Trilobed protease; beta 99.7 4.3E-15 1.5E-19 125.3 27.2 259 23-348 15-328 (347)
176 3pe7_A Oligogalacturonate lyas 99.7 1.1E-15 3.8E-20 130.9 23.8 235 80-349 41-327 (388)
177 1qks_A Cytochrome CD1 nitrite 99.7 3.4E-14 1.2E-18 126.4 33.5 311 9-348 183-535 (567)
178 2bkl_A Prolyl endopeptidase; m 99.7 1.9E-15 6.4E-20 139.3 25.3 277 35-349 78-395 (695)
179 2xdw_A Prolyl endopeptidase; a 99.7 7.2E-15 2.5E-19 135.7 28.7 279 35-349 82-412 (710)
180 2xdw_A Prolyl endopeptidase; a 99.7 1.8E-14 6.2E-19 133.1 29.6 250 24-306 126-416 (710)
181 2z2n_A Virginiamycin B lyase; 99.7 5.7E-13 1.9E-17 109.6 35.5 273 23-348 15-292 (299)
182 3e5z_A Putative gluconolactona 99.7 6E-14 2.1E-18 115.5 28.4 236 23-304 28-286 (296)
183 2oiz_A Aromatic amine dehydrog 99.7 3.1E-14 1.1E-18 120.4 27.3 278 34-349 13-332 (361)
184 1rwi_B Serine/threonine-protei 99.7 3.8E-14 1.3E-18 115.0 25.3 235 76-349 25-262 (270)
185 2dg1_A DRP35, lactonase; beta 99.7 1.1E-14 3.7E-19 122.1 22.5 239 75-348 6-260 (333)
186 1rwi_B Serine/threonine-protei 99.7 6E-14 2E-18 113.8 25.3 239 24-305 25-265 (270)
187 3e5z_A Putative gluconolactona 99.7 1.3E-13 4.6E-18 113.4 27.4 232 72-344 25-280 (296)
188 3c5m_A Oligogalacturonate lyas 99.7 2.4E-15 8.3E-20 129.0 16.5 232 77-349 38-327 (396)
189 2bkl_A Prolyl endopeptidase; m 99.7 3.4E-14 1.2E-18 130.9 24.9 248 24-305 122-398 (695)
190 2gop_A Trilobed protease; beta 99.6 8.2E-14 2.8E-18 117.4 23.6 216 75-347 15-288 (347)
191 2qc5_A Streptogramin B lactona 99.6 5E-12 1.7E-16 104.0 33.3 273 23-348 20-297 (300)
192 1yr2_A Prolyl oligopeptidase; 99.6 2E-13 6.9E-18 126.6 27.3 277 35-349 117-439 (741)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.4E-13 2.5E-17 109.8 27.4 244 23-304 18-299 (314)
194 1qks_A Cytochrome CD1 nitrite 99.6 5E-12 1.7E-16 112.5 33.1 274 50-349 176-475 (567)
195 3dsm_A Uncharacterized protein 99.6 7.9E-13 2.7E-17 110.4 25.8 256 50-349 16-300 (328)
196 2z2n_A Virginiamycin B lyase; 99.6 7.8E-12 2.7E-16 102.8 29.8 235 73-348 13-252 (299)
197 3no2_A Uncharacterized protein 99.6 3.1E-12 1.1E-16 103.8 26.6 220 35-291 4-230 (276)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 6.3E-12 2.1E-16 104.2 29.1 241 75-349 18-297 (314)
199 3dsm_A Uncharacterized protein 99.6 6.7E-12 2.3E-16 104.7 29.1 238 24-303 45-301 (328)
200 3g4e_A Regucalcin; six bladed 99.6 1.3E-11 4.5E-16 101.5 29.0 235 24-294 14-263 (297)
201 1yr2_A Prolyl oligopeptidase; 99.6 2.4E-12 8.2E-17 119.5 27.0 246 24-305 164-442 (741)
202 3hrp_A Uncharacterized protein 99.5 1.4E-11 4.6E-16 105.9 27.8 238 75-349 131-408 (409)
203 1xip_A Nucleoporin NUP159; bet 99.5 4.7E-13 1.6E-17 112.6 18.1 177 76-290 39-230 (388)
204 2mad_H Methylamine dehydrogena 99.5 1.9E-10 6.4E-15 97.4 33.8 275 34-349 30-348 (373)
205 1xip_A Nucleoporin NUP159; bet 99.5 1E-12 3.4E-17 110.6 19.2 185 127-338 38-231 (388)
206 2ghs_A AGR_C_1268P; regucalcin 99.5 2.3E-10 7.8E-15 95.4 32.8 230 24-294 50-293 (326)
207 3sjl_D Methylamine dehydrogena 99.5 2.3E-11 7.8E-16 102.0 24.9 282 9-331 65-384 (386)
208 2qc5_A Streptogramin B lactona 99.5 2.6E-10 8.8E-15 93.7 29.7 234 74-348 19-257 (300)
209 3no2_A Uncharacterized protein 99.5 7.8E-12 2.7E-16 101.5 19.5 181 138-348 4-192 (276)
210 3sjl_D Methylamine dehydrogena 99.5 1.6E-10 5.5E-15 96.9 27.7 281 32-349 40-361 (386)
211 3c75_H MADH, methylamine dehyd 99.5 2E-10 6.7E-15 98.0 27.8 280 34-349 82-400 (426)
212 2mad_H Methylamine dehydrogena 99.4 4.9E-10 1.7E-14 94.9 29.7 257 13-306 57-352 (373)
213 2qe8_A Uncharacterized protein 99.4 1.5E-11 5.3E-16 103.3 19.9 274 14-339 10-309 (343)
214 3iuj_A Prolyl endopeptidase; h 99.4 4.9E-11 1.7E-15 109.8 24.6 240 73-349 127-403 (693)
215 3g4e_A Regucalcin; six bladed 99.4 1.2E-10 4.1E-15 95.8 22.9 199 129-348 15-226 (297)
216 3dr2_A Exported gluconolactona 99.4 2.7E-10 9.3E-15 94.0 24.8 228 23-295 45-298 (305)
217 2ece_A 462AA long hypothetical 99.4 2.8E-09 9.5E-14 90.1 28.3 233 84-339 93-399 (462)
218 2ghs_A AGR_C_1268P; regucalcin 99.4 8.7E-10 3E-14 91.8 25.3 196 129-348 51-257 (326)
219 3hrp_A Uncharacterized protein 99.4 1.8E-09 6.1E-14 92.7 27.4 243 24-303 132-409 (409)
220 3iuj_A Prolyl endopeptidase; h 99.3 6.5E-10 2.2E-14 102.3 26.1 247 23-305 129-406 (693)
221 3dr2_A Exported gluconolactona 99.3 2.2E-09 7.7E-14 88.5 25.6 229 73-345 43-301 (305)
222 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.8E-14 93.5 23.6 261 9-305 105-403 (426)
223 1mda_H Methylamine dehydrogena 99.2 1.8E-09 6.3E-14 90.6 20.0 273 9-330 52-366 (368)
224 2ece_A 462AA long hypothetical 99.2 4.5E-08 1.5E-12 82.9 27.2 228 34-292 93-399 (462)
225 1yiq_A Quinohemoprotein alcoho 99.1 3.6E-08 1.2E-12 90.3 26.3 195 131-338 239-535 (689)
226 1kb0_A Quinohemoprotein alcoho 99.1 4.7E-08 1.6E-12 89.4 25.3 195 131-338 247-537 (677)
227 2hz6_A Endoplasmic reticulum t 99.1 3.5E-11 1.2E-15 102.0 4.2 179 138-349 8-190 (369)
228 1mda_H Methylamine dehydrogena 99.1 1.9E-08 6.6E-13 84.4 19.5 255 52-349 47-344 (368)
229 2iwa_A Glutamine cyclotransfer 99.1 1.5E-07 5.1E-12 74.8 23.0 203 70-305 14-238 (266)
230 1npe_A Nidogen, entactin; glyc 99.1 2.9E-06 9.8E-11 68.3 31.1 256 36-333 1-263 (267)
231 2qe8_A Uncharacterized protein 99.0 2.7E-08 9.2E-13 83.4 19.4 208 128-348 18-275 (343)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.0 8.6E-07 3E-11 75.2 28.4 264 40-348 106-375 (376)
233 1npe_A Nidogen, entactin; glyc 99.0 1.1E-06 3.7E-11 70.8 27.6 224 93-348 4-235 (267)
234 1kb0_A Quinohemoprotein alcoho 99.0 2.5E-07 8.4E-12 84.6 24.8 237 93-349 131-505 (677)
235 3hxj_A Pyrrolo-quinoline quino 99.0 2.5E-08 8.6E-13 83.0 16.8 273 12-348 8-281 (330)
236 2iwa_A Glutamine cyclotransfer 99.0 6.5E-07 2.2E-11 71.1 23.3 191 129-348 23-234 (266)
237 3hxj_A Pyrrolo-quinoline quino 99.0 2.5E-07 8.5E-12 76.9 22.0 211 93-348 110-321 (330)
238 2hz6_A Endoplasmic reticulum t 99.0 9.5E-10 3.3E-14 93.2 7.1 201 35-284 8-215 (369)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.6E-06 9E-11 72.2 27.4 264 35-348 52-334 (376)
240 1fwx_A Nitrous oxide reductase 98.9 1.7E-07 5.9E-12 82.2 18.7 243 35-304 100-431 (595)
241 1yiq_A Quinohemoprotein alcoho 98.9 1.5E-06 5.2E-11 79.6 25.8 237 93-349 124-503 (689)
242 4a2l_A BT_4663, two-component 98.9 5E-05 1.7E-09 71.1 35.7 283 23-348 215-523 (795)
243 1fwx_A Nitrous oxide reductase 98.8 6.2E-07 2.1E-11 78.7 19.8 231 78-340 88-407 (595)
244 4a2l_A BT_4663, two-component 98.8 4.6E-05 1.6E-09 71.3 33.8 282 25-348 175-477 (795)
245 3v65_B Low-density lipoprotein 98.8 2.8E-05 9.7E-10 66.1 29.5 222 93-348 89-315 (386)
246 2fp8_A Strictosidine synthase; 98.8 1.2E-05 4.1E-10 66.6 26.3 241 23-304 19-313 (322)
247 3v64_C Agrin; beta propeller, 98.8 4.4E-05 1.5E-09 63.9 30.1 222 93-347 47-271 (349)
248 3nol_A Glutamine cyclotransfer 98.8 1.3E-06 4.3E-11 68.7 18.5 189 70-293 36-245 (262)
249 3nok_A Glutaminyl cyclase; bet 98.8 3.2E-06 1.1E-10 66.4 20.7 181 129-341 57-255 (268)
250 3nol_A Glutamine cyclotransfer 98.8 3.6E-06 1.2E-10 66.1 20.8 182 129-341 45-245 (262)
251 2p4o_A Hypothetical protein; p 98.8 1.3E-05 4.5E-10 65.8 25.5 245 11-292 20-277 (306)
252 3qqz_A Putative uncharacterize 98.7 4.5E-05 1.5E-09 60.2 27.4 199 127-348 27-250 (255)
253 1kv9_A Type II quinohemoprotei 98.7 1.2E-05 4.2E-10 73.4 25.0 237 93-349 120-486 (668)
254 1kv9_A Type II quinohemoprotei 98.7 2E-05 6.8E-10 72.0 26.2 187 131-337 234-517 (668)
255 2fp8_A Strictosidine synthase; 98.7 5.7E-05 1.9E-09 62.5 26.5 243 76-349 20-311 (322)
256 3sov_A LRP-6, low-density lipo 98.7 0.00011 3.6E-09 60.6 27.4 225 93-348 7-235 (318)
257 3nok_A Glutaminyl cyclase; bet 98.6 9.2E-06 3.2E-10 63.8 19.6 188 70-293 48-255 (268)
258 1ijq_A LDL receptor, low-densi 98.6 0.00012 4.2E-09 60.3 30.4 224 92-348 3-235 (316)
259 3mbr_X Glutamine cyclotransfer 98.6 2.1E-05 7.1E-10 61.3 21.0 189 70-293 14-224 (243)
260 2xe4_A Oligopeptidase B; hydro 98.6 3.3E-05 1.1E-09 71.7 26.0 198 76-302 175-396 (751)
261 1k3i_A Galactose oxidase precu 98.6 8.1E-06 2.8E-10 74.6 21.7 283 27-340 190-530 (656)
262 3mbr_X Glutamine cyclotransfer 98.6 5.3E-05 1.8E-09 59.0 22.6 183 128-341 22-224 (243)
263 3v9f_A Two-component system se 98.6 0.00018 6.1E-09 67.2 30.3 283 23-348 258-565 (781)
264 4hw6_A Hypothetical protein, I 98.5 0.00011 3.8E-09 63.3 25.5 236 76-348 140-430 (433)
265 2p4o_A Hypothetical protein; p 98.5 0.00027 9.3E-09 57.9 29.8 228 75-341 32-278 (306)
266 3v65_B Low-density lipoprotein 98.5 0.00037 1.3E-08 59.1 29.6 221 50-304 95-318 (386)
267 3v9f_A Two-component system se 98.5 0.00088 3E-08 62.6 32.2 287 23-347 211-520 (781)
268 1flg_A Protein (quinoprotein e 98.5 0.00059 2E-08 61.2 28.6 176 149-337 291-545 (582)
269 2ad6_A Methanol dehydrogenase 98.4 0.00014 4.9E-09 65.1 23.8 176 150-337 273-523 (571)
270 1ijq_A LDL receptor, low-densi 98.4 0.00058 2E-08 56.2 25.8 177 149-348 10-192 (316)
271 2xe4_A Oligopeptidase B; hydro 98.4 7.5E-05 2.6E-09 69.3 21.8 195 128-347 175-394 (751)
272 3p5b_L Low density lipoprotein 98.4 0.00083 2.8E-08 57.3 29.9 189 93-304 86-277 (400)
273 3qqz_A Putative uncharacterize 98.4 0.00047 1.6E-08 54.4 26.0 211 23-258 27-251 (255)
274 3m0c_C LDL receptor, low-densi 98.3 0.0018 6.3E-08 60.0 29.6 189 93-304 397-589 (791)
275 3v64_C Agrin; beta propeller, 98.3 0.00088 3E-08 56.0 31.6 221 50-304 52-275 (349)
276 3tc9_A Hypothetical hydrolase; 98.3 0.00079 2.7E-08 58.0 25.5 156 76-260 138-301 (430)
277 4a0p_A LRP6, LRP-6, low-densit 98.3 0.0021 7.1E-08 58.2 29.9 223 93-348 9-234 (628)
278 1w6s_A Methanol dehydrogenase 98.3 0.00068 2.3E-08 60.8 24.3 193 132-337 246-532 (599)
279 3amr_A 3-phytase; beta-propell 98.2 0.00093 3.2E-08 54.9 22.6 193 138-348 39-260 (355)
280 2ad6_A Methanol dehydrogenase 98.2 0.00052 1.8E-08 61.4 23.0 164 93-269 118-343 (571)
281 3kya_A Putative phosphatase; s 98.2 0.0024 8.3E-08 55.4 28.1 246 76-348 140-472 (496)
282 2p9w_A MAL S 1 allergenic prot 98.2 0.00027 9.1E-09 57.6 17.7 156 130-304 16-215 (334)
283 3p5b_L Low density lipoprotein 98.1 0.0028 9.6E-08 54.0 33.7 223 50-305 91-321 (400)
284 3tc9_A Hypothetical hydrolase; 98.1 0.001 3.5E-08 57.3 22.1 156 128-304 138-301 (430)
285 4hw6_A Hypothetical protein, I 98.1 0.0012 4E-08 57.0 22.3 200 128-348 140-371 (433)
286 3sre_A PON1, serum paraoxonase 98.1 0.0017 5.7E-08 54.0 22.2 209 24-258 51-296 (355)
287 3m0c_C LDL receptor, low-densi 98.1 0.0064 2.2E-07 56.4 31.0 223 50-305 403-633 (791)
288 3s94_A LRP-6, low-density lipo 98.1 0.0029 9.8E-08 57.2 24.8 190 91-304 10-202 (619)
289 3sov_A LRP-6, low-density lipo 98.1 0.0029 9.9E-08 52.0 30.3 224 50-305 12-239 (318)
290 1w6s_A Methanol dehydrogenase 98.1 0.0029 1E-07 56.8 24.4 163 94-269 124-350 (599)
291 1flg_A Protein (quinoprotein e 98.0 0.0064 2.2E-07 54.5 30.0 169 93-269 120-363 (582)
292 1k3i_A Galactose oxidase precu 98.0 0.00022 7.7E-09 65.1 16.9 232 28-293 248-530 (656)
293 2xbg_A YCF48-like protein; pho 98.0 0.0044 1.5E-07 51.2 24.8 233 23-302 80-320 (327)
294 1n7d_A LDL receptor, low-densi 98.0 7.4E-05 2.5E-09 68.5 12.5 180 99-304 386-571 (699)
295 1n7d_A LDL receptor, low-densi 97.9 0.00015 5.2E-09 66.5 12.8 225 23-281 406-634 (699)
296 2ism_A Putative oxidoreductase 97.8 0.012 4E-07 49.2 28.1 243 75-339 31-333 (352)
297 3kya_A Putative phosphatase; s 97.8 0.0091 3.1E-07 51.9 21.4 158 128-304 140-341 (496)
298 3a9g_A Putative uncharacterize 97.7 0.016 5.5E-07 48.4 26.5 244 75-338 29-329 (354)
299 2p9w_A MAL S 1 allergenic prot 97.7 0.0055 1.9E-07 49.9 17.5 161 176-349 8-213 (334)
300 2ism_A Putative oxidoreductase 97.6 0.023 8E-07 47.3 24.9 245 23-295 31-337 (352)
301 3s94_A LRP-6, low-density lipo 97.6 0.039 1.3E-06 49.8 28.7 160 127-304 349-510 (619)
302 2xzh_A Clathrin heavy chain 1; 97.6 0.022 7.6E-07 46.2 28.5 238 30-304 74-332 (365)
303 2xbg_A YCF48-like protein; pho 97.5 0.026 8.8E-07 46.6 30.3 275 22-347 35-318 (327)
304 3pbp_A Nucleoporin NUP82; beta 97.5 0.012 4.2E-07 49.5 17.6 134 205-346 41-207 (452)
305 3sre_A PON1, serum paraoxonase 97.5 0.031 1.1E-06 46.4 22.8 181 147-341 81-287 (355)
306 4a0p_A LRP6, LRP-6, low-densit 97.4 0.068 2.3E-06 48.4 32.1 222 50-305 14-238 (628)
307 3ei3_A DNA damage-binding prot 97.3 0.13 4.5E-06 50.0 29.6 186 139-347 844-1058(1158)
308 1bpo_A Protein (clathrin); cla 97.3 0.061 2.1E-06 45.5 29.2 235 35-304 76-331 (494)
309 2xzh_A Clathrin heavy chain 1; 97.3 0.056 1.9E-06 43.9 27.4 290 7-345 4-326 (365)
310 3pbp_A Nucleoporin NUP82; beta 97.2 0.07 2.4E-06 45.0 18.3 158 35-210 31-208 (452)
311 3a9g_A Putative uncharacterize 97.1 0.094 3.2E-06 43.7 23.8 239 23-291 29-329 (354)
312 2vpj_A Kelch-like protein 12; 97.1 0.08 2.7E-06 42.8 21.3 146 138-304 112-278 (301)
313 3ii7_A Kelch-like protein 7; p 97.1 0.087 3E-06 42.7 20.5 229 38-304 13-272 (306)
314 3amr_A 3-phytase; beta-propell 96.9 0.14 4.7E-06 42.2 22.9 207 40-269 42-272 (355)
315 2xn4_A Kelch-like protein 2; s 96.9 0.13 4.3E-06 41.7 22.3 232 36-304 16-276 (302)
316 2g8s_A Glucose/sorbosone dehyd 96.8 0.19 6.4E-06 41.9 25.3 252 23-296 18-346 (353)
317 1xi4_A Clathrin heavy chain; a 96.7 0.4 1.4E-05 47.1 21.2 235 35-304 76-331 (1630)
318 3ei3_A DNA damage-binding prot 96.6 0.64 2.2E-05 45.3 32.4 140 196-348 845-996 (1158)
319 4asc_A Kelch repeat and BTB do 96.6 0.24 8.1E-06 40.4 18.0 185 93-304 7-221 (315)
320 2vpj_A Kelch-like protein 12; 96.4 0.29 9.8E-06 39.5 21.3 147 138-304 62-231 (301)
321 2g8s_A Glucose/sorbosone dehyd 96.3 0.37 1.3E-05 40.0 26.8 244 76-340 19-341 (353)
322 1cru_A Protein (soluble quinop 96.3 0.46 1.6E-05 41.0 19.3 108 180-291 26-162 (454)
323 1zgk_A Kelch-like ECH-associat 96.3 0.35 1.2E-05 39.2 20.9 106 138-260 121-240 (308)
324 3ii7_A Kelch-like protein 7; p 96.3 0.35 1.2E-05 39.1 20.4 183 93-304 14-225 (306)
325 1tl2_A L10, protein (tachylect 96.3 0.26 8.8E-06 37.6 15.3 149 181-344 41-203 (236)
326 1xi4_A Clathrin heavy chain; a 96.1 1.2 4E-05 44.0 21.8 256 9-306 5-291 (1630)
327 1tl2_A L10, protein (tachylect 96.1 0.19 6.5E-06 38.3 12.6 154 128-304 42-208 (236)
328 4asc_A Kelch repeat and BTB do 96.1 0.43 1.5E-05 38.8 20.8 106 138-260 98-221 (315)
329 1bpo_A Protein (clathrin); cla 96.0 0.62 2.1E-05 39.6 27.0 287 9-345 5-325 (494)
330 3ott_A Two-component system se 95.8 1.2 4E-05 41.4 32.2 266 23-342 22-299 (758)
331 3das_A Putative oxidoreductase 95.6 0.82 2.8E-05 37.8 27.9 248 75-339 32-326 (347)
332 2xn4_A Kelch-like protein 2; s 95.3 0.87 3E-05 36.6 20.7 147 138-304 61-229 (302)
333 2uvk_A YJHT; unknown function, 95.3 1 3.4E-05 37.3 20.2 14 149-162 168-181 (357)
334 1cru_A Protein (soluble quinop 94.9 1.7 5.7E-05 37.6 18.8 111 128-247 28-162 (454)
335 2uvk_A YJHT; unknown function, 94.9 1.4 4.8E-05 36.4 19.8 50 205-258 168-224 (357)
336 3das_A Putative oxidoreductase 94.6 1.6 5.5E-05 36.1 28.2 247 23-295 32-330 (347)
337 2woz_A Kelch repeat and BTB do 94.2 1.9 6.4E-05 35.0 23.5 106 138-260 109-231 (318)
338 2be1_A Serine/threonine-protei 94.1 1.5 5.3E-05 36.0 13.3 116 139-270 10-139 (339)
339 1zgk_A Kelch-like ECH-associat 93.0 3 0.0001 33.6 19.4 143 93-260 124-287 (308)
340 3ott_A Two-component system se 92.8 6 0.00021 36.6 30.3 284 25-348 193-499 (758)
341 2zwa_A Leucine carboxyl methyl 91.4 8.5 0.00029 35.3 19.0 196 93-304 400-635 (695)
342 3b7f_A Glycosyl hydrolase, BNR 91.1 6.1 0.00021 33.1 26.8 236 39-291 24-296 (394)
343 2be1_A Serine/threonine-protei 91.0 3.7 0.00013 33.8 11.5 61 196-257 112-181 (339)
344 3sbq_A Nitrous-oxide reductase 90.8 0.39 1.3E-05 42.1 5.7 96 253-349 300-406 (638)
345 2woz_A Kelch repeat and BTB do 90.3 6.2 0.00021 31.8 19.1 184 93-304 18-231 (318)
346 3sbq_A Nitrous-oxide reductase 89.2 6.1 0.00021 34.9 11.7 79 178-260 320-408 (638)
347 2zwa_A Leucine carboxyl methyl 88.4 15 0.00051 33.7 15.6 162 35-217 451-638 (695)
348 3s25_A Hypothetical 7-bladed b 88.2 9 0.00031 30.9 24.4 139 133-304 110-255 (302)
349 3q6k_A 43.2 kDa salivary prote 86.2 14 0.00047 30.9 18.7 179 150-338 124-341 (381)
350 3s25_A Hypothetical 7-bladed b 82.6 17 0.00059 29.2 20.6 170 80-298 109-287 (302)
351 2wg3_C Hedgehog-interacting pr 78.8 31 0.0011 29.7 13.3 105 130-250 17-160 (463)
352 3b7f_A Glycosyl hydrolase, BNR 76.5 32 0.0011 28.6 25.4 163 127-298 177-366 (394)
353 1suu_A DNA gyrase subunit A; t 75.1 31 0.0011 27.8 21.6 201 138-348 7-228 (312)
354 3f7f_A Nucleoporin NUP120; nuc 75.0 23 0.00078 32.4 10.0 38 127-167 222-259 (729)
355 3uc1_A DNA gyrase subunit A; D 73.7 35 0.0012 27.8 18.4 200 138-347 2-224 (327)
356 1wp5_A Topoisomerase IV; broke 72.5 37 0.0013 27.6 19.7 194 138-346 4-220 (323)
357 4gq2_M Nucleoporin NUP120; bet 67.6 89 0.003 29.9 19.5 38 128-166 237-274 (950)
358 4gq2_M Nucleoporin NUP120; bet 66.7 93 0.0032 29.8 15.6 37 229-268 237-273 (950)
359 4hvt_A Ritya.17583.B, post-pro 65.0 86 0.0029 28.8 24.5 98 203-303 318-429 (711)
360 1sqj_A OXG-RCBH, oligoxylogluc 64.3 93 0.0032 29.0 17.8 154 127-294 15-190 (789)
361 3qhy_B Beta-lactamase inhibito 60.5 61 0.0021 25.6 21.6 219 75-347 24-242 (282)
362 1sqj_A OXG-RCBH, oligoxylogluc 58.7 1.2E+02 0.004 28.3 19.4 163 74-249 14-190 (789)
363 4fhn_B Nucleoporin NUP120; pro 58.1 44 0.0015 32.7 9.1 36 182-220 239-274 (1139)
364 4hvt_A Ritya.17583.B, post-pro 53.1 1.4E+02 0.0048 27.5 21.3 192 134-344 137-372 (711)
365 1zi0_A DNA gyrase subunit A; b 48.7 1E+02 0.0035 24.7 20.7 200 138-347 2-222 (307)
366 3no0_A DNA gyrase subunit A; D 47.2 1E+02 0.0035 24.2 21.7 198 127-346 24-239 (276)
367 1q47_A Semaphorin 3A; beta pro 46.3 1.3E+02 0.0044 26.2 9.2 73 274-346 405-487 (495)
368 3qhy_B Beta-lactamase inhibito 45.9 1.1E+02 0.0037 24.1 19.4 225 50-332 41-265 (282)
369 2cn3_A Xyloglucanase, beta-1,4 45.8 1.8E+02 0.0063 26.7 16.8 159 127-300 23-225 (737)
370 3no0_A DNA gyrase subunit A; D 43.1 1.2E+02 0.0041 23.9 19.5 164 127-304 68-246 (276)
371 4fhn_B Nucleoporin NUP120; pro 42.9 78 0.0027 31.0 8.2 37 229-268 239-275 (1139)
372 4a9v_A PHOX; hydrolase, beta-p 42.2 1.4E+02 0.0047 26.7 8.7 63 181-248 476-550 (592)
373 3zwu_A Alkaline phosphatase PH 39.7 1.4E+02 0.0047 26.8 8.5 59 183-246 478-548 (592)
374 3al9_A Plexin-A2; beta-propell 39.7 77 0.0026 28.0 6.9 72 274-346 401-476 (539)
375 3uc1_A DNA gyrase subunit A; D 36.9 1.7E+02 0.0057 23.7 22.1 193 138-342 108-321 (327)
376 4a9v_A PHOX; hydrolase, beta-p 36.7 1.2E+02 0.0041 27.1 7.4 61 24-88 477-544 (592)
377 4gz8_A Semaphorin-3A; multi-do 36.5 2.5E+02 0.0085 25.6 9.9 73 274-346 413-495 (667)
378 3zwu_A Alkaline phosphatase PH 35.7 89 0.003 28.0 6.7 59 25-87 478-543 (592)
379 1wp5_A Topoisomerase IV; broke 34.9 1.8E+02 0.0062 23.5 24.7 248 35-304 4-277 (323)
380 3kvp_A Uncharacterized protein 34.4 36 0.0012 20.0 2.6 22 50-71 37-58 (72)
381 3l6v_A GYRA, DNA gyrase subuni 32.8 2.1E+02 0.0072 23.7 21.4 195 136-349 5-263 (370)
382 3ol2_B Plexin-B1; beta-propell 29.7 2.6E+02 0.009 24.5 8.5 71 274-346 388-461 (528)
383 3f7f_A Nucleoporin NUP120; nuc 28.8 64 0.0022 29.6 4.6 26 196-221 232-257 (729)
384 1q47_A Semaphorin 3A; beta pro 26.1 2.8E+02 0.0097 24.1 8.1 58 196-255 422-487 (495)
385 4gz8_A Semaphorin-3A; multi-do 25.1 2.9E+02 0.0099 25.2 8.1 58 196-255 430-495 (667)
386 1olz_A Semaphorin 4D; developm 24.5 89 0.0031 28.4 4.8 70 275-346 399-477 (663)
387 3q6k_A 43.2 kDa salivary prote 23.8 3.2E+02 0.011 22.8 21.1 189 100-291 124-341 (381)
388 1olz_A Semaphorin 4D; developm 20.6 2.8E+02 0.0096 25.2 7.2 58 241-299 416-477 (663)
389 3oky_B Putative uncharacterize 20.5 4.5E+02 0.016 23.3 9.2 73 274-346 404-495 (565)
390 1zi0_A DNA gyrase subunit A; b 20.3 3.3E+02 0.011 21.7 25.4 156 138-304 108-277 (307)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.2e-49 Score=331.87 Aligned_cols=289 Identities=17% Similarity=0.233 Sum_probs=229.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEec-----ccc---ccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVAL-----NED---ISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~-----~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
..|.+++|+| ||++ |++++ ++.+++|+. +.. ...........+...|.+++|+|++. ++
T Consensus 31 ~~v~~~~fs~--dG~~-l~~~s-----d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-----l~ 97 (344)
T 4gqb_B 31 RQLEAARYRS--DGAL-LLGAS-----SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG-----IL 97 (344)
T ss_dssp SEEEEEEECT--TSCE-EEEEE-----CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE-----EE
T ss_pred CCEEEEEECC--CCCE-EEEEe-----CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe-----EE
Confidence 5699999999 9995 77665 445555542 111 01112233456778899999999974 54
Q ss_pred EEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688 95 ATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK 173 (349)
Q Consensus 95 ~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 173 (349)
+++.| .|+|||+.+++........ ..+|...|++++|+| ++++|++|+.||.|++||+++++.+
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~~~~~---~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~----------- 162 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIVSKFC---KYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVL----------- 162 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEEEEEE---EECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE-----------
T ss_pred EEECCCEEEEEeccCCCceeEeecc---ccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEE-----------
Confidence 44446 9999999887533222111 123448999999998 9999999999999999999998887
Q ss_pred eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
..+.+|...|.+++|+|++. .+|++++.|+.|++||+++++....+....+...+.+++|+|.++.+|++|+.|+ .|
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~--~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-~v 239 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKD--SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-TV 239 (344)
T ss_dssp EEECCCSSCEEEEEECSSCT--TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-EE
T ss_pred EEEcCcCCceEEEEecCCCC--CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-cE
Confidence 67889999999999999874 6899999999999999999887666554456677999999997788999999999 69
Q ss_pred EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688 254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP 333 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 333 (349)
++||+++ ++++.++.+|...|++++|+|++..+|++|+.|++|+|||++.. .+..+.+|.+.|++++|+|+++
T Consensus 240 ~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~------~~~~~~~H~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 240 SLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS------ELFRSQAHRDFVRDATWSPLNH 312 (344)
T ss_dssp EEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC------EEEEECCCSSCEEEEEECSSST
T ss_pred EEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------cEEEEcCCCCCEEEEEEeCCCC
Confidence 9999997 88999999999999999999998644999999999999999773 2456789999999999999988
Q ss_pred ceE-EEEcCCeEEEeeC
Q psy17688 334 DWI-AICYNKYLEVLRV 349 (349)
Q Consensus 334 ~l~-~~~~d~~v~vw~v 349 (349)
.++ +++.|++|++|++
T Consensus 313 ~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 313 SLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp TEEEEEETTSCEEEEEC
T ss_pred eEEEEEcCCCeEEEEEC
Confidence 765 5778999999986
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.9e-49 Score=332.91 Aligned_cols=295 Identities=15% Similarity=0.251 Sum_probs=236.5
Q ss_pred CCceeeEEEeecCCCceEEEEEeeec--ccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVE--EYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG 98 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~--~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~ 98 (349)
...|++++||| ||++ ||+|+... --++.|++|+...... ........+|...|.+++|+|++. +++++.
T Consensus 42 ~~~V~~v~fSp--DG~~-las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-----~l~~s~ 113 (357)
T 4g56_B 42 EVQIGAVRYRR--DGAL-LLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-----ILVASD 113 (357)
T ss_dssp CSEEEEEEECS--SSCE-EEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-----EEEEET
T ss_pred cCCEEEEEECC--CCCE-EEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-----EEEEEC
Confidence 36799999999 9996 99887511 0167888887653321 122334557889999999999986 777777
Q ss_pred C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688 99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI 177 (349)
Q Consensus 99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+ .|+|||+.+++........ ..+|...|++++|+| ++++|++|+.||.|++||+++++.+ ..+.
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~---~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~-----------~~~~ 178 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFA---KYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVL-----------KSYN 178 (357)
T ss_dssp TSCEEEC--------CCCCEE---ECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEE-----------EEEC
T ss_pred CCEEEEeeccccceeEEEeec---cCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEE-----------EEEc
Confidence 7 9999999876533222111 123458999999998 9999999999999999999998887 6788
Q ss_pred ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688 178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD 257 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d 257 (349)
+|...|.+++|+|++. .++++++.|+.|++||+++++.........+...+.+++|+|.++.+|++|+.|+ .|++||
T Consensus 179 ~h~~~v~~v~~s~~~~--~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-~i~~wd 255 (357)
T 4g56_B 179 AHSSEVNCVAACPGKD--TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-NVSLVN 255 (357)
T ss_dssp CCSSCEEEEEECTTCS--SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-CEEEEE
T ss_pred CCCCCEEEEEEccCCC--ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-ceeEEE
Confidence 9999999999999873 5899999999999999999876665555567788999999996678999999999 599999
Q ss_pred ccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceE
Q psy17688 258 VRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWI 336 (349)
Q Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~ 336 (349)
+++ ++++..+.+|...|++++|+|++..+|++|+.|++|+|||+++. + +....+|.+.|++++|+| ++..|+
T Consensus 256 ~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----~-~~~~~~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 256 IKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----E-VFRDLSHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp SSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----E-EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred CCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----c-EeEECCCCCCEEEEEEeCCCCCEEE
Confidence 997 88899999999999999999998654999999999999999873 2 344567899999999999 788888
Q ss_pred EEEcCCeEEEeeC
Q psy17688 337 AICYNKYLEVLRV 349 (349)
Q Consensus 337 ~~~~d~~v~vw~v 349 (349)
+++.|++|++|++
T Consensus 329 s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 329 TVGWDHKVLHHHL 341 (357)
T ss_dssp EEETTSCEEEEEC
T ss_pred EEcCCCeEEEEEC
Confidence 9999999999986
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-47 Score=332.60 Aligned_cols=287 Identities=16% Similarity=0.246 Sum_probs=247.4
Q ss_pred eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
...+..+ .+|++++|+| ++++ ||+|+. ||.|+||++.. ++... ...+|...|.+++|+|+++ +|
T Consensus 101 ~~~l~gh~~~V~~~~~~p--~~~~-l~s~s~----Dg~i~vwd~~~--~~~~~-~l~~h~~~V~~v~~~~~~~-----~l 165 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP--VFSV-MVSASE----DATIKVWDYET--GDFER-TLKGHTDSVQDISFDHSGK-----LL 165 (410)
T ss_dssp SCEEECCSSCEEEEEECS--SSSE-EEEEES----SSCEEEEETTT--CCCCE-EECCCSSCEEEEEECTTSS-----EE
T ss_pred eEeecccCCcEEEEEEcC--CCCE-EEEEeC----CCeEEEEECCC--CcEEE-EEeccCCcEEEEEEcCCCC-----EE
Confidence 3344444 7999999999 9996 999998 99999998863 33332 2457999999999999998 88
Q ss_pred EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++|+ | +|++||+.+.+. ...+.+ |...|.+++|+| ++++|++|+.|+.|++||++++..+
T Consensus 166 ~sgs~D~~i~iwd~~~~~~--~~~~~~-----h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~---------- 227 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFEC--IRTMHG-----HDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCV---------- 227 (410)
T ss_dssp EEEETTSCCCEEETTSSCE--EECCCC-----CSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE----------
T ss_pred EEEeCCCeEEEEeCCCCce--eEEEcC-----CCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEE----------
Confidence 8888 6 999999987542 222333 447899999998 8999999999999999999998877
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC-------------
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD------------- 239 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------- 239 (349)
..+.+|...|.++.++|++ .++++++.|+.|++||+++++....+ ..+...|.+++|+|..
T Consensus 228 -~~~~~h~~~v~~~~~~~~g---~~l~s~s~D~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 228 -KTFTGHREWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp -EEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred -EEEeCCCccEEEEEECCCC---CEEEEEcCCCeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccc
Confidence 6788999999999999999 89999999999999999987665444 3577899999999931
Q ss_pred ------CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688 240 ------PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI 313 (349)
Q Consensus 240 ------~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 313 (349)
+.+|++|+.|+ .|++||+++ +.++..+.+|...|++++|+|++++ |++|+.|+.|++||+.. ..++
T Consensus 302 ~~~~~~g~~l~sgs~D~-~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~-----~~~~ 373 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDK-TIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKN-----KRCM 373 (410)
T ss_dssp ------CCEEEEEETTS-EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTT-----SCCC
T ss_pred cccCCCCCEEEEEeCCC-eEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-----CceE
Confidence 67899999999 699999997 8889999999999999999999999 99999999999999977 3457
Q ss_pred EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 314 LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..+.+|...|++++|+|++++|++++.|+.|++|++
T Consensus 374 ~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 788999999999999999999999999999999985
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=321.14 Aligned_cols=283 Identities=15% Similarity=0.291 Sum_probs=241.2
Q ss_pred CceeeEEEeec--CCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688 23 WPLYSMNWSVR--PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D 99 (349)
Q Consensus 23 ~~v~~~~~sp~--~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~ 99 (349)
.+|++++|+|. .++++ |++|+. |+.|+||++........ ....+|...|.+++|++++. ++++++ |
T Consensus 33 ~~V~~v~~~~~~~~~~~~-l~tgs~----D~~v~vW~~~~~~~~~~-~~l~gh~~~v~~~~~~~~~~-----~l~s~s~D 101 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSET-VVTGSL----DDLVKVWKWRDERLDLQ-WSLEGHQLGVVSVDISHTLP-----IAASSSLD 101 (321)
T ss_dssp SCEEEEEEC-------CE-EEEEET----TSCEEEEEEETTEEEEE-EEECCCSSCEEEEEECSSSS-----EEEEEETT
T ss_pred CcEEEEEEecCCCCCCCE-EEEEcC----CCCEEEEECCCCCeeee-eeeccCCCCEEEEEECCCCC-----EEEEEeCC
Confidence 89999999983 24665 999999 99999999864422221 22458999999999999998 888888 6
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++||+.+++.. ..+..+. ..+.+++|+| ++++|++|+.||.|++||+++++.. ..+..
T Consensus 102 ~~i~lWd~~~~~~~--~~~~~~~-----~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~-----------~~~~~ 162 (321)
T 3ow8_A 102 AHIRLWDLENGKQI--KSIDAGP-----VDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKE-----------YSLDT 162 (321)
T ss_dssp SEEEEEETTTTEEE--EEEECCT-----TCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEE-----------EEEEC
T ss_pred CcEEEEECCCCCEE--EEEeCCC-----ccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCcee-----------EEecC
Confidence 9999999876422 2233322 5688899998 9999999999999999999988876 56778
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
|...|.+++|+|++ ++|++++.|+.|++||+++++....+ ..+..+|.+++|+| ++.+|++|+.|+ .|++||+
T Consensus 163 ~~~~v~~~~~spdg---~~lasg~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~sp-d~~~l~s~s~dg-~i~iwd~ 235 (321)
T 3ow8_A 163 RGKFILSIAYSPDG---KYLASGAIDGIINIFDIATGKLLHTL--EGHAMPIRSLTFSP-DSQLLVTASDDG-YIKIYDV 235 (321)
T ss_dssp SSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCCCEEEECT-TSCEEEEECTTS-CEEEEET
T ss_pred CCceEEEEEECCCC---CEEEEEcCCCeEEEEECCCCcEEEEE--cccCCceeEEEEcC-CCCEEEEEcCCC-eEEEEEC
Confidence 88899999999999 89999999999999999987654443 35778999999999 999999999999 5999999
Q ss_pred cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688 259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI 338 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 338 (349)
+. ......+.+|...|.+++|+|++++ |++++.|+.|++||+++ ..++..+.+|...|.+++|+|++..|+++
T Consensus 236 ~~-~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~D~~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 236 QH-ANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGT-----RTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp TT-CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CC-cceeEEEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCC-----CEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 97 7788899999999999999999998 99999999999999987 44678888999999999999999999999
Q ss_pred EcCCeEEEeeC
Q psy17688 339 CYNKYLEVLRV 349 (349)
Q Consensus 339 ~~d~~v~vw~v 349 (349)
+.|+.|++|++
T Consensus 309 ~~d~~i~vwd~ 319 (321)
T 3ow8_A 309 GDDQEIHIYDC 319 (321)
T ss_dssp ETTCCEEEEEC
T ss_pred eCCCeEEEEeC
Confidence 99999999985
No 5
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-47 Score=319.66 Aligned_cols=304 Identities=16% Similarity=0.272 Sum_probs=240.4
Q ss_pred ceeeeeecC-C-ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 14 KEIYKYEAP-W-PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 14 ~~~~~~~~~-~-~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
..+..+..+ . .|++++|+| +|++ ||+|+. |+.|+||++.............+|...|.+++|+|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp--~g~~-las~~~----D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~---- 74 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNP--AGTL-LASCGG----DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN---- 74 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECT--TSSC-EEEEET----TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS----
T ss_pred EEeeeecCCCCCcEEEEEECC--CCCE-EEEEcC----CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC----
Confidence 445566555 3 899999999 9996 999998 99999998864321112222247999999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
+|++++ | .+++|++..........+.+|. ..|.+++|+| ++++|++|+.|+.|++||+.++...
T Consensus 75 -~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-----~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~------- 140 (345)
T 3fm0_A 75 -YLASASFDATTCIWKKNQDDFECVTTLEGHE-----NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEY------- 140 (345)
T ss_dssp -EEEEEETTSCEEEEEECCC-EEEEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCE-------
T ss_pred -EEEEEECCCcEEEEEccCCCeEEEEEccCCC-----CCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCe-------
Confidence 888888 6 9999999876533334444444 7899999998 9999999999999999999876543
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
.....+.+|...|.+++|+|++ ++|++++.|+.|++||++.++.........|...|.+++|+| ++.+|++++.|
T Consensus 141 -~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D 215 (345)
T 3fm0_A 141 -ECVSVLNSHTQDVKHVVWHPSQ---ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDD 215 (345)
T ss_dssp -EEEEEECCCCSCEEEEEECSSS---SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred -EEEEEecCcCCCeEEEEECCCC---CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCC
Confidence 1225678899999999999999 899999999999999998865443334456889999999999 99999999999
Q ss_pred CcEEEEEeccCCC--------------cceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE-
Q psy17688 250 ACEVIILDVRVPC--------------TPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI- 313 (349)
Q Consensus 250 ~~~i~v~d~~~~~--------------~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~- 313 (349)
+ +|++||...+. .++..+.+ |...|.+++|+|++.. |++++.|+.|++|+............
T Consensus 216 ~-~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 216 R-TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp S-CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-EEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred C-eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-EEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 9 69999975422 12334444 8889999999999998 99999999999999986543222111
Q ss_pred ---EEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688 314 ---LAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV 349 (349)
Q Consensus 314 ---~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v 349 (349)
....+|...|++++|+|+++ .|++++.|+.|++|++
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred EEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 12246889999999999985 6778888999999984
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-45 Score=306.92 Aligned_cols=291 Identities=16% Similarity=0.180 Sum_probs=241.0
Q ss_pred eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
....|..+ .+|++++|+| ++++ ||+|+. +|.|+||++.. +... .....|..+|.+++|+|+++ +
T Consensus 5 ~~~~~~~h~~~V~~~~fsp--~~~~-l~s~~~----dg~v~lWd~~~--~~~~-~~~~~~~~~v~~~~~~~~~~-----~ 69 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHP--TEPW-VLTTLY----SGRVELWNYET--QVEV-RSIQVTETPVRAGKFIARKN-----W 69 (304)
T ss_dssp CEEEEEEECSCEEEEEECS--SSSE-EEEEET----TSEEEEEETTT--TEEE-EEEECCSSCEEEEEEEGGGT-----E
T ss_pred eEEeecCCCCceEEEEECC--CCCE-EEEEcC----CCcEEEEECCC--Ccee-EEeeccCCcEEEEEEeCCCC-----E
Confidence 34455555 7899999999 9996 999998 99999998863 3322 23446888999999999998 8
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
|++|+ | .|++||+.+++. ...+..|. ..|.+++|+| ++.+|++|+.||+|++||++++....
T Consensus 70 l~s~s~d~~i~vwd~~~~~~--~~~~~~h~-----~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~-------- 133 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEK--VVDFEAHP-----DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALE-------- 133 (304)
T ss_dssp EEEEETTSEEEEEETTTCCE--EEEEECCS-----SCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEE--------
T ss_pred EEEECCCCEEEEEECCCCcE--EEEEeCCC-----CcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchh--------
Confidence 88888 5 999999988753 23344444 7899999998 89999999999999999998875432
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCC
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNA 250 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~ 250 (349)
..+.+|...|.+++|+|.+. ..|++|+.|+.|++||++......... ..+...+..++|+|. ++.+|++|+.|+
T Consensus 134 --~~~~~h~~~v~~v~~~p~~~--~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~ 208 (304)
T 2ynn_A 134 --QTFEGHEHFVMCVAFNPKDP--STFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDL 208 (304)
T ss_dssp --EEECCCCSCEEEEEECTTCT--TEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTS
T ss_pred --hhhcccCCcEEEEEECCCCC--CEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCC
Confidence 56789999999999999532 799999999999999998876544443 345678999999873 567999999999
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
+|++||+++ ++++.++.+|...|.+++|+|+++. |++|+.||.|++||+++ .+.+..+..|...+.+++|+|
T Consensus 209 -~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~Dg~i~iWd~~~-----~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 209 -TIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST-----YKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp -EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT-----CCEEEEECCSSSSEEEEEECT
T ss_pred -eEEEEeCCC-CccceeeCCCCCCEEEEEECCCCCE-EEEEcCCCeEEEEECCC-----CceeeeccCCCccEEEEEECC
Confidence 699999997 8899999999999999999999998 99999999999999988 446778888899999999999
Q ss_pred CCCc-eEEEEcCCeEEEeeC
Q psy17688 331 TQPD-WIAICYNKYLEVLRV 349 (349)
Q Consensus 331 ~~~~-l~~~~~d~~v~vw~v 349 (349)
++.. +++++.++.+.+|++
T Consensus 281 ~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 281 TGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp TCGGGCEEEEETTEEEEEEC
T ss_pred CCCceEEEEecCCceEEEEe
Confidence 8754 466777777877764
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-45 Score=311.72 Aligned_cols=289 Identities=16% Similarity=0.250 Sum_probs=241.7
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
.+....+..+ .+|++++|+| |+++ ||+|+. ||.|+||++... +... ....|...|.+++|+|+++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~--d~~~-l~s~s~----Dg~v~iWd~~~~--~~~~-~~~~~~~~v~~~~~s~~~~---- 110 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGT--DSRL-LLSASQ----DGKLIIWDSYTT--NKVH-AIPLRSSWVMTCAYAPSGN---- 110 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECT--TSSE-EEEEET----TTEEEEEETTTC--CEEE-EEECSSSCEEEEEECTTSS----
T ss_pred chhheeecCCCCceEEEEECC--CCCE-EEEEeC----CCcEEEEECCCC--Ccce-EeecCCccEEEEEECCCCC----
Confidence 3445566666 7999999998 9996 999998 999999987533 3222 2346888999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCchh--heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRL--ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
+|++++ | .|++|++.+.+... ...+.+ |...|.++.|++ + ..+++++.|+.|++||+.+++..
T Consensus 111 -~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~----- 177 (340)
T 1got_B 111 -YVACGGLDNICSIYNLKTREGNVRVSRELAG-----HTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQT----- 177 (340)
T ss_dssp -EEEEEETTCEEEEEETTTCSBSCEEEEEEEC-----CSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEE-----
T ss_pred -EEEEEeCCCeEEEEECccCCCcceeEEEecC-----CCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEE-----
Confidence 888887 5 99999998754221 222333 347899999986 4 45999999999999999998877
Q ss_pred cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
..+.+|...|.+++|+|++ +++++|+.|+.|++||+++++....+ ..|...|.+++|+| ++.+|++|+
T Consensus 178 ------~~~~~h~~~v~~~~~~~~~---~~l~sg~~d~~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p-~~~~l~s~s 245 (340)
T 1got_B 178 ------TTFTGHTGDVMSLSLAPDT---RLFVSGACDASAKLWDVREGMCRQTF--TGHESDINAICFFP-NGNAFATGS 245 (340)
T ss_dssp ------EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCSEEEEE--CCCSSCEEEEEECT-TSSEEEEEE
T ss_pred ------EEEcCCCCceEEEEECCCC---CEEEEEeCCCcEEEEECCCCeeEEEE--cCCcCCEEEEEEcC-CCCEEEEEc
Confidence 6778999999999999998 89999999999999999987655444 35778999999999 999999999
Q ss_pred eCCcEEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688 248 MNACEVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ 325 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 325 (349)
.|+ .|++||++. .+.+..+.. +...|++++|+|++++ |++|+.|+.|++||+.. ...+..+.+|...|.+
T Consensus 246 ~d~-~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~d~~i~vwd~~~-----~~~~~~~~~h~~~v~~ 317 (340)
T 1got_B 246 DDA-TCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALK-----ADRAGVLAGHDNRVSC 317 (340)
T ss_dssp TTS-CEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEE
T ss_pred CCC-cEEEEECCC-CcEEEEEccCCcccceEEEEECCCCCE-EEEECCCCeEEEEEccc-----CcEeeEeecCCCcEEE
Confidence 999 599999997 666655542 3357999999999998 99999999999999987 4457788999999999
Q ss_pred EEEcCCCCceEEEEcCCeEEEee
Q psy17688 326 IQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 326 ~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
++|+|++.+|++++.|+.|++|+
T Consensus 318 ~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 LGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999996
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-46 Score=319.39 Aligned_cols=306 Identities=16% Similarity=0.223 Sum_probs=240.4
Q ss_pred ccccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688 10 PTTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 10 ~~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
+........+..+ .+|++++|+| ++++ ||+|+. ||.|+||++.. ++... ....|...|.+++|+|+++
T Consensus 53 ~~~~~~~~~l~gH~~~V~~~~~sp--~~~~-l~s~s~----D~~v~iWd~~~--~~~~~-~~~~h~~~v~~~~~s~~g~- 121 (380)
T 3iz6_a 53 PTDLVCCRTLQGHSGKVYSLDWTP--EKNW-IVSASQ----DGRLIVWNALT--SQKTH-AIKLHCPWVMECAFAPNGQ- 121 (380)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECT--TSSC-EEEEET----TSEEEEEETTT--TEEEE-EEECCCTTCCCCEECTTSS-
T ss_pred cceeEEeecccccccEEEEEEEcC--CCCE-EEEEeC----CCeEEEEECCC--Cccce-EEecCCCCEEEEEECCCCC-
Confidence 3344455667766 7999999999 9996 999998 99999998753 33222 2447889999999999998
Q ss_pred CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
+|++|+ | .+++|++.................+|...+.++.|.|..+..|++|+.|++|++||+.+++.+..+.
T Consensus 122 ----~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 197 (380)
T 3iz6_a 122 ----SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG 197 (380)
T ss_dssp ----EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC
T ss_pred ----EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee
Confidence 899988 6 9999999754211111111112234457888999998667789999999999999999988763211
Q ss_pred ccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM 245 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 245 (349)
. ....+|...|.+++|+| ++ ++|++|+.|+.|++||++........ ...|...|.+++|+| ++.+|++
T Consensus 198 ~------~~~~~h~~~v~~~~~~~~~~---~~l~sgs~D~~v~~wd~~~~~~~~~~-~~~h~~~v~~v~~~p-~~~~l~s 266 (380)
T 3iz6_a 198 S------EFPSGHTADVLSLSINSLNA---NMFISGSCDTTVRLWDLRITSRAVRT-YHGHEGDINSVKFFP-DGQRFGT 266 (380)
T ss_dssp C------CSSSSCCSCEEEEEECSSSC---CEEEEEETTSCEEEEETTTTCCCCEE-ECCCSSCCCEEEECT-TSSEEEE
T ss_pred c------ccCCCCccCeEEEEeecCCC---CEEEEEECCCeEEEEECCCCCcceEE-ECCcCCCeEEEEEec-CCCeEEE
Confidence 0 11157889999999987 45 89999999999999999854322222 235788999999999 9999999
Q ss_pred EeeCCcEEEEEeccCCCcceeEeecCC-------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--
Q psy17688 246 VAMNACEVIILDVRVPCTPVARLNNHR-------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-- 316 (349)
Q Consensus 246 ~~~d~~~i~v~d~~~~~~~~~~~~~~~-------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-- 316 (349)
|+.|+ +|++||+++ +..+..+..+. ..|++++|+|+|++ |++|+.||.|++||+... +.+..+
T Consensus 267 ~s~D~-~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~dg~i~vwd~~~~-----~~~~~~~~ 338 (380)
T 3iz6_a 267 GSDDG-TCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRL-LFAGYSNGDCYVWDTLLA-----EMVLNLGT 338 (380)
T ss_dssp ECSSS-CEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSE-EEEECTTSCEEEEETTTC-----CEEEEECC
T ss_pred EcCCC-eEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCE-EEEEECCCCEEEEECCCC-----ceEEEEec
Confidence 99999 699999997 77776665432 34899999999998 999999999999998763 334444
Q ss_pred --eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 317 --TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 317 --~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.+|.+.|++++|+|++.+|++++.|+.|++|++
T Consensus 339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 578999999999999999999999999999985
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-44 Score=306.74 Aligned_cols=292 Identities=14% Similarity=0.182 Sum_probs=241.7
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
.+....+..+ .+|++++|+| ++++ ||+|+. ||.|+||+.... +.... ...|...|.+++|+|++.
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~--d~~~-l~s~s~----Dg~v~vWd~~~~--~~~~~-~~~~~~~v~~~~~sp~g~---- 119 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCK--DKRR-IVSSSQ----DGKVIVWDSFTT--NKEHA-VTMPCTWVMACAYAPSGC---- 119 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECT--TSSE-EEEEET----TSEEEEEETTTC--CEEEE-EECSSSCCCEEEECTTSS----
T ss_pred cEEEEEecCCCCeEEEEEECC--CCCE-EEEEeC----CCeEEEEECCCC--CcceE-EecCCCCEEEEEECCCCC----
Confidence 3445566666 7999999998 9995 999998 999999987533 32222 345778899999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCc----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688 92 DLLATSG-D-YLRVWRAGEPET----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV 165 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 165 (349)
++++++ | .+++|++..... .....+. .|...|.++.|+| ++..|++++.|++|++||+++++.+
T Consensus 120 -~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~--- 189 (354)
T 2pbi_B 120 -AIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-----MHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLL--- 189 (354)
T ss_dssp -EEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-----ECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE---
T ss_pred -EEEEeeCCCCEEEEEEeccccccccccceeee-----ccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEE---
Confidence 888888 5 999999875421 1112222 3457899999998 8899999999999999999998877
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM 245 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 245 (349)
..+.+|...|.+++|+|... .++|++|+.||.|++||+++++....+ ..|...|.+++|+| ++.+|++
T Consensus 190 --------~~~~~h~~~v~~~~~~~~~~-g~~l~sgs~Dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p-~~~~l~s 257 (354)
T 2pbi_B 190 --------QSFHGHGADVLCLDLAPSET-GNTFVSGGCDKKAMVWDMRSGQCVQAF--ETHESDVNSVRYYP-SGDAFAS 257 (354)
T ss_dssp --------EEEECCSSCEEEEEECCCSS-CCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECT-TSSEEEE
T ss_pred --------EEEcCCCCCeEEEEEEeCCC-CCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCeEEEEEeC-CCCEEEE
Confidence 67889999999999988521 179999999999999999998765443 35778999999999 9999999
Q ss_pred EeeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce
Q psy17688 246 VAMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI 323 (349)
Q Consensus 246 ~~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v 323 (349)
|+.|+ +|++||++. ...+..+..+ ...+.+++|+|++.+ |++|+.|+.|++||+.. ..++..+.+|...|
T Consensus 258 ~s~D~-~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~~g~~d~~i~vwd~~~-----~~~~~~l~~h~~~v 329 (354)
T 2pbi_B 258 GSDDA-TCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRL-LFAGYNDYTINVWDVLK-----GSRVSILFGHENRV 329 (354)
T ss_dssp EETTS-CEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEETTT-----CSEEEEECCCSSCE
T ss_pred EeCCC-eEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCE-EEEEECCCcEEEEECCC-----CceEEEEECCCCcE
Confidence 99999 699999997 5555555433 357899999999998 99999999999999977 34577888999999
Q ss_pred EEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 324 NQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 324 ~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
++++|+|++++|++++.|+.|++|+
T Consensus 330 ~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 330 STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999995
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-44 Score=303.74 Aligned_cols=299 Identities=18% Similarity=0.241 Sum_probs=223.4
Q ss_pred ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCC
Q psy17688 14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 91 (349)
+.+..+..+ .+|++++|+| + + ||+|+. |+.|+||++.............. |...|.+++|+|+++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~--~--~-las~~~----D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~---- 71 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQ--G--I-LATGST----DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS---- 71 (330)
T ss_dssp EEEEEEECCSSCEEEEEEET--T--E-EEEEES----SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS----
T ss_pred ccceeeccCCCceeeeccCC--C--E-EEEEcC----CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC----
Confidence 345566666 7999999997 5 4 999998 99999999864322222221123 899999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCc-----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688 92 DLLATSG-D-YLRVWRAGEPET-----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR 164 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 164 (349)
+|++++ | .|+||++..... .....+.+ |...|.+++|+| ++++|++|+.|+.|++||++.....
T Consensus 72 -~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~-- 142 (330)
T 2hes_X 72 -LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-----HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEE-- 142 (330)
T ss_dssp -EEEEEETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCC--
T ss_pred -EEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-----CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCC--
Confidence 888888 6 999999864321 11222333 447899999998 8999999999999999999543211
Q ss_pred ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC--CCe
Q psy17688 165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD--PNY 242 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~ 242 (349)
......+.+|...|.+++|+|++ .+|++++.|++|++||.+.+..........|...|.+++|+| + +.+
T Consensus 143 -----~~~~~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~ 213 (330)
T 2hes_X 143 -----YECISVLQEHSQDVKHVIWHPSE---ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFR 213 (330)
T ss_dssp -----CEEEEEECCCSSCEEEEEECSSS---SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCE
T ss_pred -----eEEEEEeccCCCceEEEEECCCC---CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeE
Confidence 01225678999999999999998 899999999999999998753222233346888999999999 5 678
Q ss_pred EEEEeeCCcEEEEEeccCCC-------cceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688 243 LAMVAMNACEVIILDVRVPC-------TPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL 314 (349)
Q Consensus 243 l~~~~~d~~~i~v~d~~~~~-------~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 314 (349)
|++|+.|+ +|++||++... .....+.. |...|.+++|++++ . |++++.||.|++||....+. ....
T Consensus 214 l~s~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~-l~s~~~dg~v~iw~~~~~~~---~~~~ 287 (330)
T 2hes_X 214 LCSGSDDS-TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-L-IASVGADGVLAVYEEVDGEW---KVFA 287 (330)
T ss_dssp EEEEETTS-CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-C-EEEEETTSCEEEEEEETTEE---EEEE
T ss_pred EEEEeCCC-eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-E-EEEEeCCCEEEEEEcCCCce---EEEe
Confidence 99999999 59999997521 23344444 89999999999665 5 99999999999999976321 1122
Q ss_pred E-EeccCC-ceEEEEEcC--CCCceEEEEcCCeEEEeeC
Q psy17688 315 A-YTAAGG-EINQIQWGA--TQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 315 ~-~~~~~~-~v~~~~~~~--~~~~l~~~~~d~~v~vw~v 349 (349)
. ...|.. .|.+++|+| ++..|++++.|+.|++|++
T Consensus 288 ~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 288 KRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred ccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 2 246776 899999999 6888999999999999985
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-43 Score=295.97 Aligned_cols=290 Identities=16% Similarity=0.306 Sum_probs=240.2
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
+.....+..+ .+|++++|+| ++++ ||+|+. +|.|++|++.. ++... ...+|...|.+++|+|+++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~--~~~~-l~s~~~----dg~i~iw~~~~--~~~~~-~~~~h~~~v~~~~~~~~~~---- 78 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSP--NGEW-LASSSA----DKLIKIWGAYD--GKFEK-TISGHKLGISDVAWSSDSN---- 78 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS----
T ss_pred ceeEEEEcccCCcEEEEEECC--CCCE-EEEeeC----CCeEEEEeCCC--cccch-hhccCCCceEEEEEcCCCC----
Confidence 3445555555 7999999999 9996 999988 99999998753 33332 2457899999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
+|++++ | .|++||+.+++. ...+..| ...|.+++|+| ++++|++|+.||.|++||+++++..
T Consensus 79 -~l~s~~~d~~i~vwd~~~~~~--~~~~~~~-----~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~------- 142 (312)
T 4ery_A 79 -LLVSASDDKTLKIWDVSSGKC--LKTLKGH-----SNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCL------- 142 (312)
T ss_dssp -EEEEEETTSEEEEEETTTCCE--EEEEECC-----SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEE-------
T ss_pred -EEEEECCCCEEEEEECCCCcE--EEEEcCC-----CCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEE-------
Confidence 888887 5 999999987652 2233443 37899999998 8999999999999999999988876
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
..+..|..+|.+++|+|++ +++++++.|+.|++||+++++....+. ..+..++..++|+| ++.+|++++.|
T Consensus 143 ----~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~l~~~~~d 213 (312)
T 4ery_A 143 ----KTLPAHSDPVSAVHFNRDG---SLIVSSSYDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSP-NGKYILAATLD 213 (312)
T ss_dssp ----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEEC-CSSCCCEEEEEECT-TSSEEEEEETT
T ss_pred ----EEecCCCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCceeeEEe-ccCCCceEEEEECC-CCCEEEEEcCC
Confidence 5678899999999999998 899999999999999999876554443 34567899999999 99999999999
Q ss_pred CcEEEEEeccCCCcceeEeecCCcceEE--EEEe-eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688 250 ACEVIILDVRVPCTPVARLNNHRACVNG--IAWA-PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI 326 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~--~~~~-p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (349)
+ .|++||+++ ++.+..+.+|...+.. ..++ +++.+ |++|+.||.|++||++. .+.+..+.+|...|.++
T Consensus 214 ~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 214 N-TLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKW-IVSGSEDNLVYIWNLQT-----KEIVQKLQGHTDVVIST 285 (312)
T ss_dssp T-EEEEEETTT-TEEEEEECSSCCSSSCCCEEEECSSSCE-EEECCTTSCEEEEETTT-----CCEEEEECCCSSCEEEE
T ss_pred C-eEEEEECCC-CcEEEEEEecCCceEEEEEEEEeCCCcE-EEEECCCCEEEEEECCC-----chhhhhhhccCCcEEEE
Confidence 9 699999997 7888888888765433 3445 45666 99999999999999987 45678899999999999
Q ss_pred EEcCCCCceEEEE--cCCeEEEeeC
Q psy17688 327 QWGATQPDWIAIC--YNKYLEVLRV 349 (349)
Q Consensus 327 ~~~~~~~~l~~~~--~d~~v~vw~v 349 (349)
+|+|+++.+++++ .|+.|++|+.
T Consensus 286 ~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 286 ACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EECSSSSEEEEEECTTTCCEEEEEC
T ss_pred eecCcCCceEEEEccCCccEEEecC
Confidence 9999999888776 5899999984
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.9e-43 Score=319.71 Aligned_cols=300 Identities=17% Similarity=0.276 Sum_probs=234.2
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.+|++++|+| +++++|++|+. |+.|++|+.. .++... ...+|...|++++|+|+++ +|++++ | +
T Consensus 148 ~~v~~v~f~p--~~~~~l~s~s~----D~~v~lwd~~--~~~~~~-~l~~H~~~V~~v~fspdg~-----~las~s~D~~ 213 (611)
T 1nr0_A 148 RAMNSVDFKP--SRPFRIISGSD----DNTVAIFEGP--PFKFKS-TFGEHTKFVHSVRYNPDGS-----LFASTGGDGT 213 (611)
T ss_dssp SCEEEEEECS--SSSCEEEEEET----TSCEEEEETT--TBEEEE-EECCCSSCEEEEEECTTSS-----EEEEEETTSC
T ss_pred CCceEEEECC--CCCeEEEEEeC----CCeEEEEECC--CCeEee-eeccccCceEEEEECCCCC-----EEEEEECCCc
Confidence 6899999999 88756999998 9999999864 233332 2457999999999999998 888888 6 9
Q ss_pred EEEEECCCCCchhheecc--CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc-----------
Q psy17688 101 LRVWRAGEPETRLECILN--NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS----------- 167 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------- 167 (349)
|++||+.+++.. ..+. ......|...|.+++|+| ++++|++++.|++|++||+.+++....+..
T Consensus 214 i~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 214 IVLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp EEEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred EEEEECCCCcEe--eeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999999876532 1121 111124668999999998 999999999999999999998877654421
Q ss_pred ---------------------cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee----
Q psy17688 168 ---------------------VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY---- 222 (349)
Q Consensus 168 ---------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---- 222 (349)
..+.....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++......
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg---~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG---KTLFSADAEGHINSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence 1112334567899999999999999 899999999999999998654221100
Q ss_pred ----------------------------------------------------------------------------eCCC
Q psy17688 223 ----------------------------------------------------------------------------EDPQ 226 (349)
Q Consensus 223 ----------------------------------------------------------------------------~~~~ 226 (349)
...+
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence 0001
Q ss_pred CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
...+.+++|+| ++++|++|+.|+ .|++||+.. ... +.. .+|...|++++|+|++++ |++++.|+.|++||+..
T Consensus 448 ~~~v~~va~sp-dg~~lasgs~D~-~v~lwd~~~-~~~~~~~~-~~h~~~v~~v~fspdg~~-las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 448 SYNSSCVALSN-DKQFVAVGGQDS-KVHVYKLSG-ASVSEVKT-IVHPAEITSVAFSNNGAF-LVATDQSRKVIPYSVAN 522 (611)
T ss_dssp SSCEEEEEECT-TSCEEEEEETTS-EEEEEEEET-TEEEEEEE-EECSSCEEEEEECTTSSE-EEEEETTSCEEEEEGGG
T ss_pred CCCceEEEEeC-CCCEEEEeCCCC-eEEEEEccC-Cceeeeec-cCCCCceEEEEECCCCCE-EEEEcCCCCEEEEEcCC
Confidence 23467899999 999999999999 699999986 322 233 679999999999999998 99999999999999986
Q ss_pred CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...... ...+..|...|.+++|+|++++|++++.|++|++|++
T Consensus 523 ~~~~~~--~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 523 NFELAH--TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp TTEESC--CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCceee--eeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 221110 0123448999999999999999999999999999985
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8e-43 Score=300.41 Aligned_cols=286 Identities=18% Similarity=0.268 Sum_probs=230.0
Q ss_pred eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-----------------cCCCCeeEE
Q psy17688 18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-----------------DHPYPTTKI 80 (349)
Q Consensus 18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-----------------~~~~~v~~~ 80 (349)
.+.+...|++++|+| ||++ ||+|+ ++.++||++.. ++....... .+...|.++
T Consensus 60 ~~~h~~~V~~v~fsp--dg~~-la~g~-----~~~v~i~~~~~--g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 60 SLDHTSVVCCVKFSN--DGEY-LATGC-----NKTTQVYRVSD--GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp EEECSSCCCEEEECT--TSSE-EEEEC-----BSCEEEEETTT--CCEEEEECC-----------------CCCCBEEEE
T ss_pred ecCCCCEEEEEEECC--CCCE-EEEEc-----CCcEEEEEecC--CCEEEEecCccccccccccccccccCCCceeEEEE
Confidence 345568999999999 9996 88875 57899998853 332211100 122349999
Q ss_pred EEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688 81 MWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET 158 (349)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 158 (349)
+|+|+++ +|++|+ | .|++||+.+.+. ...+.+|. ..|.+++|+| ++..|++|+.|+.|++||+++
T Consensus 130 ~~s~dg~-----~l~s~~~d~~i~iwd~~~~~~--~~~~~~h~-----~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 130 CFSPDGK-----FLATGAEDRLIRIWDIENRKI--VMILQGHE-----QDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp EECTTSS-----EEEEEETTSCEEEEETTTTEE--EEEECCCS-----SCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EECCCCC-----EEEEEcCCCeEEEEECCCCcE--EEEEccCC-----CCEEEEEEcC-CCCEEEEecCCCcEEEEECCC
Confidence 9999998 888887 5 999999987642 23344443 7899999998 899999999999999999999
Q ss_pred cceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeE
Q psy17688 159 NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLR 232 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~ 232 (349)
++.. ..+ .+...+.+++|+| ++ ++|++++.|+.|++||+++++....+.. ..|...|.+
T Consensus 197 ~~~~-----------~~~-~~~~~v~~~~~~~~~~---~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 197 GQCS-----------LTL-SIEDGVTTVAVSPGDG---KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp TEEE-----------EEE-ECSSCEEEEEECSTTC---CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred CeeE-----------EEE-EcCCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 8776 233 3566799999999 66 8999999999999999998765443311 356788999
Q ss_pred EEEeCCCCCeEEEEeeCCcEEEEEeccCC-----------CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688 233 LAWNKQDPNYLAMVAMNACEVIILDVRVP-----------CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-----------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd 301 (349)
++|+| ++.+|++|+.|+ .|++||++.. ..+...+.+|...|.+++|+|++.+ |++|+.|+.|++||
T Consensus 262 v~~~~-~g~~l~s~s~d~-~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd 338 (393)
T 1erj_A 262 VVFTR-DGQSVVSGSLDR-SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWD 338 (393)
T ss_dssp EEECT-TSSEEEEEETTS-EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEE
T ss_pred EEECC-CCCEEEEEeCCC-EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEE
Confidence 99999 999999999999 6999999752 2245567889999999999999998 99999999999999
Q ss_pred eecCCCCCCCcEEEEeccCCceEEEEEcC------CCCceEEEEcCCeEEEeeC
Q psy17688 302 IQQMPRAIEDPILAYTAAGGEINQIQWGA------TQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~v~vw~v 349 (349)
+++ ..++..+.+|...|.+++|++ +++.|++++.|+.|++|++
T Consensus 339 ~~~-----~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 339 KKS-----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp TTT-----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCC-----CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 987 456788999999999999986 5777899999999999984
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-42 Score=290.85 Aligned_cols=291 Identities=16% Similarity=0.205 Sum_probs=231.8
Q ss_pred ceeeeeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCC
Q psy17688 14 KEIYKYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGV 89 (349)
Q Consensus 14 ~~~~~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 89 (349)
.....++.+ .+|++++|+| ++ ++ |++|+. |+.|++|++....... ......+|...|.+++|+|+++
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~--~~~~~-l~s~s~----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-- 78 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSA--GQPNL-LLSASR----DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-- 78 (319)
T ss_dssp EEEEEECCCSSCEEEEEECS--SCTTE-EEEEET----TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS--
T ss_pred EEEEEEccccceEEEEEccC--CCccE-EEEecC----CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC--
Confidence 344456655 7999999998 55 54 999998 9999999986433221 1223458999999999999998
Q ss_pred CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
+|++++ | +|++||+.+++. ...+.+|. ..|.+++|+| ++.+|++|+.|+.|++||++.. .+
T Consensus 79 ---~l~s~s~D~~v~~wd~~~~~~--~~~~~~h~-----~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~-~~----- 141 (319)
T 3frx_A 79 ---YALSASWDKTLRLWDVATGET--YQRFVGHK-----SDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQ-CL----- 141 (319)
T ss_dssp ---EEEEEETTSEEEEEETTTTEE--EEEEECCS-----SCEEEEEECT-TSCEEEEEETTSCEEEEETTSC-EE-----
T ss_pred ---EEEEEeCCCEEEEEECCCCCe--eEEEccCC-----CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-eE-----
Confidence 888888 6 999999988752 23344443 7899999998 8999999999999999999643 33
Q ss_pred cCCceeeeeeccCCceeeEEEecCCC---CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE
Q psy17688 168 VSGHVKTQLIAHDKEVYDIAFSRAGG---GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA 244 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 244 (349)
..+.+|...|.+++|+|... ....+++++.|+.|++||+++.+....+ ..|...|.+++|+| ++.+|+
T Consensus 142 ------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~sp-~g~~l~ 212 (319)
T 3frx_A 142 ------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF--IGHNSNINTLTASP-DGTLIA 212 (319)
T ss_dssp ------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE--CCCCSCEEEEEECT-TSSEEE
T ss_pred ------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee--cCCCCcEEEEEEcC-CCCEEE
Confidence 56788999999999998541 1148999999999999999986544333 35788999999999 999999
Q ss_pred EEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--------
Q psy17688 245 MVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-------- 316 (349)
Q Consensus 245 ~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-------- 316 (349)
+|+.|+ .|++||++. .+++..+.. ...|.+++|+|++.+ |++++. +.+++|++.... .+..+
T Consensus 213 s~~~dg-~i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~~-la~~~~-~~i~v~~~~~~~-----~~~~~~~~~~~~~ 282 (319)
T 3frx_A 213 SAGKDG-EIMLWNLAA-KKAMYTLSA-QDEVFSLAFSPNRYW-LAAATA-TGIKVFSLDPQY-----LVDDLRPEFAGYS 282 (319)
T ss_dssp EEETTC-EEEEEETTT-TEEEEEEEC-CSCEEEEEECSSSSE-EEEEET-TEEEEEEETTEE-----EEEEECCCCTTCC
T ss_pred EEeCCC-eEEEEECCC-CcEEEEecC-CCcEEEEEEcCCCCE-EEEEcC-CCcEEEEeCcCe-----eeeccCccccccc
Confidence 999999 699999997 777887775 468999999999987 777765 459999987621 12222
Q ss_pred eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 317 TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 317 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..|...+.+++|+|+|++|++++.|+.|++|++
T Consensus 283 ~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 234668999999999999999999999999985
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.5e-42 Score=312.60 Aligned_cols=288 Identities=15% Similarity=0.229 Sum_probs=231.2
Q ss_pred eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
....+..+ ..|++++|+| ||++ ||+|+. +|.|+||++........ .....|..+|.+++|+|+++ .
T Consensus 51 ~~~~~~~h~~~v~~~~~sp--dg~~-lasg~~----d~~v~lWd~~~~~~~~~-~~~~~~~~~v~~v~fs~dg~-----~ 117 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSP--SGYY-CASGDV----HGNVRIWDTTQTTHILK-TTIPVFSGPVKDISWDSESK-----R 117 (611)
T ss_dssp CCEEECCCSSCEEEEEECT--TSSE-EEEEET----TSEEEEEESSSTTCCEE-EEEECSSSCEEEEEECTTSC-----E
T ss_pred cCeEecCCCCceEEEEECC--CCcE-EEEEeC----CCCEEEeECCCCcceee-EeecccCCceEEEEECCCCC-----E
Confidence 34445444 7899999999 9996 999998 99999999864333222 23457899999999999998 7
Q ss_pred EEEeC-C-----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 94 LATSG-D-----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 94 l~~~~-~-----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
|++++ + .|++||. +.. ...+. +|...|.+++|+| ++. .|++|+.|++|++||..+++..
T Consensus 118 l~~~~~~~~~~~~v~~wd~--~~~--~~~l~-----gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~---- 183 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDT--GTS--NGNLT-----GQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFK---- 183 (611)
T ss_dssp EEEEECCSSCSEEEEETTT--CCB--CBCCC-----CCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEE----
T ss_pred EEEEECCCCceeEEEEeeC--CCC--cceec-----CCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEe----
Confidence 77665 2 4666663 321 22233 3448999999998 554 6999999999999999887766
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeEEEEeCCCCC
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLRLAWNKQDPN 241 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ 241 (349)
..+.+|...|.+++|+|++ ++|++++.|++|++||+++++....+.. ..|...|.+++|+| ++.
T Consensus 184 -------~~l~~H~~~V~~v~fspdg---~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~ 252 (611)
T 1nr0_A 184 -------STFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGT 252 (611)
T ss_dssp -------EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSS
T ss_pred -------eeeccccCceEEEEECCCC---CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCC
Confidence 6788999999999999999 8999999999999999998775544322 15788999999999 999
Q ss_pred eEEEEeeCCcEEEEEeccCCCcce-------------------------------------------eEeecCCcceEEE
Q psy17688 242 YLAMVAMNACEVIILDVRVPCTPV-------------------------------------------ARLNNHRACVNGI 278 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~~~~~-------------------------------------------~~~~~~~~~v~~~ 278 (349)
+|++++.|+ +|++||+++ ++.+ ..+.+|...|+++
T Consensus 253 ~l~s~s~D~-~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 253 KIASASADK-TIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp EEEEEETTS-EEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEEeCCC-eEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 999999999 799999976 3322 3345789999999
Q ss_pred EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+|+|++++ |++++.|+.|++||+.+.. ....+ ..|...|.+++|++++ .+++++.|+.+++|++
T Consensus 331 ~~spdg~~-l~s~s~D~~v~~Wd~~~~~-----~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 331 SSSADGKT-LFSADAEGHINSWDISTGI-----SNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp EECTTSSE-EEEEETTSCEEEEETTTCC-----EEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECS
T ss_pred EEeCCCCE-EEEEeCCCcEEEEECCCCc-----eeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeec
Confidence 99999998 9999999999999998732 22222 4688999999999876 5899999999999974
No 16
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-41 Score=285.90 Aligned_cols=292 Identities=16% Similarity=0.221 Sum_probs=239.5
Q ss_pred cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCCCC
Q psy17688 11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 88 (349)
.....+..+.+..+|++++|+| ++++ |++++ +|.|++|++............ ..|...|.+++|+|+++
T Consensus 40 ~~~~~~~~~~h~~~v~~~~~~~--~~~~-l~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 110 (337)
T 1gxr_A 40 RHARQINTLNHGEVVCAVTISN--PTRH-VYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC- 110 (337)
T ss_dssp SEEEEEEEECCSSCCCEEEECS--SSSE-EEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-
T ss_pred CccccceeccCCCceEEEEEec--CCcE-EEEcC-----CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-
Confidence 3344555566668999999998 9995 77764 799999999754322222111 16889999999999998
Q ss_pred CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
+|++++ + .|++|++.+.+......+..+. ..|.+++|+| +++++++++.||.|++||+++++..
T Consensus 111 ----~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~---- 176 (337)
T 1gxr_A 111 ----TLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLV---- 176 (337)
T ss_dssp ----EEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE----
T ss_pred ----EEEEEcCCCcEEEEECCCCCcceeeecccCC-----CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCcee----
Confidence 777776 5 9999999887533333344333 7899999998 8999999999999999999988776
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 246 (349)
..+..|...+.+++|+|++ +++++++.|+.|++||+++++..... .+...+.+++|+| ++.+++++
T Consensus 177 -------~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~ 242 (337)
T 1gxr_A 177 -------RQFQGHTDGASCIDISNDG---TKLWTGGLDNTVRSWDLREGRQLQQH---DFTSQIFSLGYCP-TGEWLAVG 242 (337)
T ss_dssp -------EEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECT-TSSEEEEE
T ss_pred -------eeeecccCceEEEEECCCC---CEEEEEecCCcEEEEECCCCceEeee---cCCCceEEEEECC-CCCEEEEE
Confidence 5678899999999999998 89999999999999999987654443 3567899999999 99999999
Q ss_pred eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688 247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI 326 (349)
Q Consensus 247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 326 (349)
+.++ .|++||++. .+ ...+..|...|.+++|+|++++ |++++.||.|++||++.. ..+. ...|...|.++
T Consensus 243 ~~~~-~i~~~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~~~~~-----~~~~-~~~~~~~v~~~ 312 (337)
T 1gxr_A 243 MESS-NVEVLHVNK-PD-KYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYG-----ASIF-QSKESSSVLSC 312 (337)
T ss_dssp ETTS-CEEEEETTS-SC-EEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTC-----CEEE-EEECSSCEEEE
T ss_pred cCCC-cEEEEECCC-CC-eEEEcCCccceeEEEECCCCCE-EEEecCCCcEEEEECCCC-----eEEE-EecCCCcEEEE
Confidence 9999 599999986 33 4567789999999999999998 999999999999999873 2333 34468899999
Q ss_pred EEcCCCCceEEEEcCCeEEEeeC
Q psy17688 327 QWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 327 ~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+|+|+++++++++.|+.|++|++
T Consensus 313 ~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 313 DISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECTTSCEEEEEETTSCEEEEEE
T ss_pred EECCCCCEEEEecCCCeEEEEEE
Confidence 99999999999999999999985
No 17
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-43 Score=308.80 Aligned_cols=319 Identities=12% Similarity=0.115 Sum_probs=226.4
Q ss_pred ccceeeeeecCCceeeEEEeecCCC-------ceEEEEEeee---------------cccCCeEEEEeccccccccccce
Q psy17688 12 TQKEIYKYEAPWPLYSMNWSVRPDK-------LFRLAIGSYV---------------EEYNNKVQIVALNEDISEFGPKS 69 (349)
Q Consensus 12 ~~~~~~~~~~~~~v~~~~~sp~~~~-------~~~la~g~~~---------------~~~~g~i~i~~~~~~~~~~~~~~ 69 (349)
..+....+..+.+|++|+|+|..++ ++ ||+|+.. ...|+.|+||+++..........
T Consensus 123 ~~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~-LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~ 201 (524)
T 2j04_B 123 GKRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQY-LAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ 201 (524)
T ss_dssp CCSCEEEEECCC--CCCSCEEECCCCSSCSSEEE-EEEEEEC------------------CEEEEEEEEETTTCCEEEEE
T ss_pred CCcceEEEECCCceeEEEecccCCCCccCcCCeE-EEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE
Confidence 3455667778899999999994322 64 8887742 13478999999865432211111
Q ss_pred -EecCCCCeeEEEEecCCCCC-CCcEEEEeC-C-cEEEEECCCCCchhhe--ecc--CCCCCCCcCceeEEEecCCCCCe
Q psy17688 70 -TIDHPYPTTKIMWIPDRKGV-FPDLLATSG-D-YLRVWRAGEPETRLEC--ILN--NNKNSDFCAPLTSFDWNEVDPNL 141 (349)
Q Consensus 70 -~~~~~~~v~~~~~~~~~~~~-~~~~l~~~~-~-~i~vw~~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~ 141 (349)
...|.+.|.+++|+|++... ...+||+++ | +|+|||+..+...... ... ......|...|++++|++ + ..
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~ 279 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TT 279 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-Ce
Confidence 23567899999999972100 011888887 6 9999999865421000 000 001123447899999986 4 58
Q ss_pred EEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE--EEecCCCCccEEEEEcCCCcEEEEECCCCCcee
Q psy17688 142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI--AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST 219 (349)
Q Consensus 142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 219 (349)
|++|+.||+|++||++++... ...+.+|...|.++ .|+|++. .+|++++.|++|++||+++++...
T Consensus 280 lasgs~DgtV~lWD~~~~~~~----------~~~~~~H~~~V~sv~~~~s~~g~--~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVP----------SFYDQVHDSYILSVSTAYSDFED--TVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSC----------SEEEECSSSCEEEEEEECCTTSC--CEEEEEETTSEEEEECGGGHHHHC
T ss_pred EEEEeCCCEEEEEECCCCCCc----------eEEeecccccEEEEEEEcCCCCC--eEEEEeccCCeEEEEECCCCCccc
Confidence 999999999999999876432 14578999999999 5677642 589999999999999999876544
Q ss_pred eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688 220 IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI 299 (349)
Q Consensus 220 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i 299 (349)
.+........+.+++|+| ++..+++++.|+ +|++||++. ...+..+.+|.+.|++++|+|+++. |++|+.||+|++
T Consensus 348 ~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~-tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~l 423 (524)
T 2j04_B 348 TTVSRFRGSNLVPVVYCP-QIYSYIYSDGAS-SLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLII 423 (524)
T ss_dssp EEEEECSCCSCCCEEEET-TTTEEEEECSSS-EEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEEC
T ss_pred ccccccccCcccceEeCC-CcCeEEEeCCCC-cEEEEECcc-cccceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEE
Confidence 433222223588999999 888999999999 699999997 7777888899999999999999998 999999999999
Q ss_pred EEeecCCCC---------------------------------------CCCcEEEEeccCCceEEEEEcCCCC---ceEE
Q psy17688 300 WDIQQMPRA---------------------------------------IEDPILAYTAAGGEINQIQWGATQP---DWIA 337 (349)
Q Consensus 300 wd~~~~~~~---------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~ 337 (349)
||+...... ....+..+.+|...|.+++|+|+++ .+++
T Consensus 424 wd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs 503 (524)
T 2j04_B 424 TNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF 503 (524)
T ss_dssp CBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred EechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence 986431000 0112344566888999999999964 6677
Q ss_pred EEcCCeEEEeeC
Q psy17688 338 ICYNKYLEVLRV 349 (349)
Q Consensus 338 ~~~d~~v~vw~v 349 (349)
++.+|.|+||++
T Consensus 504 g~~~g~vrlw~l 515 (524)
T 2j04_B 504 SNSAGLLTLEYL 515 (524)
T ss_dssp ECTTSEEEEEEC
T ss_pred hccCceEEEEEc
Confidence 777899999986
No 18
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.9e-42 Score=298.05 Aligned_cols=321 Identities=18% Similarity=0.339 Sum_probs=248.9
Q ss_pred ccccceeeeeecCCceeeEEEeecCCC-------ceEEEEEeeecccCCeEEEEecc-----------------------
Q psy17688 10 PTTQKEIYKYEAPWPLYSMNWSVRPDK-------LFRLAIGSYVEEYNNKVQIVALN----------------------- 59 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~v~~~~~sp~~~~-------~~~la~g~~~~~~~g~i~i~~~~----------------------- 59 (349)
|..|+.+..+...+|..++.|.|...+ ..+|++|+++....+.|.+++++
T Consensus 33 ~~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~ 112 (430)
T 2xyi_A 33 PFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGF 112 (430)
T ss_dssp HHHEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC---------------------
T ss_pred hHHHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccc
Confidence 456778899999999999999994321 13599999876667889998764
Q ss_pred -ccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCC--------CchhheeccCCCCCCCcCc
Q psy17688 60 -EDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEP--------ETRLECILNNNKNSDFCAP 128 (349)
Q Consensus 60 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~--------~~~~~~~~~~~~~~~~~~~ 128 (349)
...+++.......|.+.|++++|+|++.. +|++++ + .|++|++... .......+.. |...
T Consensus 113 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~----~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~ 183 (430)
T 2xyi_A 113 GSVCGKIEIEIKINHEGEVNRARYMPQNAC----VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-----HQKE 183 (430)
T ss_dssp -----CEEEEEEEEESSCCSEEEEETTEEE----EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-----CSSC
T ss_pred cCCCCceEEEEEEcCCCcEEEEEECCCCCc----EEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-----CCCC
Confidence 11223444556789999999999998422 888888 4 9999999752 1122223333 3478
Q ss_pred eeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688 129 LTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV 207 (349)
Q Consensus 129 i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v 207 (349)
|++++|+| ++. +|++|+.||.|++||+.++...... ......+.+|...|.+++|+|.+. .+|++++.|+.|
T Consensus 184 v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~~~--~~l~s~~~dg~i 256 (430)
T 2xyi_A 184 GYGLSWNP-NLNGYLLSASDDHTICLWDINATPKEHRV----IDAKNIFTGHTAVVEDVAWHLLHE--SLFGSVADDQKL 256 (430)
T ss_dssp CCCEEECT-TSTTEEEEECTTSCEEEEETTSCCBGGGE----EECSEEECCCSSCEEEEEECSSCT--TEEEEEETTSEE
T ss_pred eEEEEeCC-CCCCeEEEEeCCCeEEEEeCCCCCCCCce----eccceeecCCCCCEeeeEEeCCCC--CEEEEEeCCCeE
Confidence 99999998 555 9999999999999999874321100 011245678999999999999543 899999999999
Q ss_pred EEEECCCCC---ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCC
Q psy17688 208 RMFDLRHLE---HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 284 (349)
Q Consensus 208 ~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~ 284 (349)
++||+++.. ....+ ..+...|.+++|+|.+..+|++|+.|+ .|++||++....++..+..|...|++++|+|++
T Consensus 257 ~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg-~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSADK-TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp EEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred EEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeCCC-eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence 999999863 22222 257789999999994445799999999 699999998677899999999999999999999
Q ss_pred CCEEEEEcCCCcEEEEEeecCCCCC---------CCcEEEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688 285 SCHICTAGDDHQALIWDIQQMPRAI---------EDPILAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV 349 (349)
Q Consensus 285 ~~~l~~~~~d~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v 349 (349)
+.+|++++.|+.|++||+....... ...+..+.+|...|++++|+|+++ .+++++.|+.|++|++
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 8779999999999999998743221 135566778899999999999999 6777888999999985
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.9e-42 Score=284.83 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=209.2
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
..+|.+.|++++|+|+++ +|++++ | .|++||+.++.. ...+..+. .+|.+++|+| ++++|++|+.
T Consensus 9 ~~~h~~~V~~~~fsp~~~-----~l~s~~~dg~v~lWd~~~~~~--~~~~~~~~-----~~v~~~~~~~-~~~~l~s~s~ 75 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVELWNYETQVE--VRSIQVTE-----TPVRAGKFIA-RKNWIIVGSD 75 (304)
T ss_dssp EEEECSCEEEEEECSSSS-----EEEEEETTSEEEEEETTTTEE--EEEEECCS-----SCEEEEEEEG-GGTEEEEEET
T ss_pred ecCCCCceEEEEECCCCC-----EEEEEcCCCcEEEEECCCCce--eEEeeccC-----CcEEEEEEeC-CCCEEEEECC
Confidence 447999999999999998 888887 6 999999987642 22333333 7899999998 9999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
|+.|++||+.+++.+ ..+.+|...|.+++|+|++ ++|++|+.|++|++||++++...... ...|.
T Consensus 76 d~~i~vwd~~~~~~~-----------~~~~~h~~~v~~~~~~~~~---~~l~sgs~D~~v~lWd~~~~~~~~~~-~~~h~ 140 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKV-----------VDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWALEQT-FEGHE 140 (304)
T ss_dssp TSEEEEEETTTCCEE-----------EEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEEGGGTTEEEEE-ECCCC
T ss_pred CCEEEEEECCCCcEE-----------EEEeCCCCcEEEEEEcCCC---CEEEEECCCCeEEEEECCCCcchhhh-hcccC
Confidence 999999999998887 6788999999999999999 89999999999999999876443332 23578
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEee--CCCCEEEEEcCCCcEEEEEeec
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAP--HSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p--~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
..|.+++|+|.++.+|++|+.|+ +|++||++. ..+...+ ..|...+..+.|+| ++.+ |++++.|+.|++||+++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~-~v~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDDLTIKIWDYQT 217 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-EEEEEETTC-SSCSEEEECCCTTCEEEEEECCSTTCCE-EEEEETTSEEEEEETTT
T ss_pred CcEEEEEECCCCCCEEEEEeCCC-eEEEEECCC-CCccceeccCCcCcEEEEEEEEcCCCCE-EEEEcCCCeEEEEeCCC
Confidence 89999999997789999999999 699999987 4444444 45678899999987 5666 99999999999999987
Q ss_pred CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..++..+.+|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 218 -----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 218 -----KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp -----TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred -----CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 4467889999999999999999999999999999999985
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.2e-41 Score=285.24 Aligned_cols=298 Identities=16% Similarity=0.215 Sum_probs=227.3
Q ss_pred cceeeeeecC-CceeeEEE-----eecCCCceEEEEEeeecccCCeEEEEeccccccc----cccceEecCCCCeeEEEE
Q psy17688 13 QKEIYKYEAP-WPLYSMNW-----SVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE----FGPKSTIDHPYPTTKIMW 82 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~-----sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~ 82 (349)
......++.+ .+|++++| +| +++++ ||+|+. |+.|+||++...... .......+|...|.+++|
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~-~d~~~-l~sgs~----D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~ 84 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKEN-EDSPV-LISGSR----DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL 84 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTT-CCCCE-EEEEET----TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE
T ss_pred eeeeeeeccchhhhhheeeEEEeecC-CCCCE-EEEEcC----CCEEEEEECCcCCcccccccccchhccCCCceEEEEE
Confidence 3445566666 79999999 43 37885 999998 999999998643211 112224479999999999
Q ss_pred ecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc
Q psy17688 83 IPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ 160 (349)
Q Consensus 83 ~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 160 (349)
+|++. ++++++ | .|++||+.+++. ...+.+| ...|.+++|+| ++++|++|+.|+.|++||+....
T Consensus 85 ~~~~~-----~l~s~s~D~~v~lwd~~~~~~--~~~~~~h-----~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 85 SQENC-----FAISSSWDKTLRLWDLRTGTT--YKRFVGH-----QSEVYSVAFSP-DNRQILSAGAEREIKLWNILGEC 151 (343)
T ss_dssp CSSTT-----EEEEEETTSEEEEEETTSSCE--EEEEECC-----CSCEEEEEECS-STTEEEEEETTSCEEEEESSSCE
T ss_pred CCCCC-----EEEEEcCCCcEEEEECCCCcE--EEEEcCC-----CCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCc
Confidence 99998 888888 6 999999987642 2233444 37899999998 99999999999999999997433
Q ss_pred eeeeecccCCceeeeeeccCCceeeEEEecCCCC-------ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688 161 VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG-------RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL 233 (349)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 233 (349)
... ......|...|.+++|+|++.. ..++++++.|+.|++||.+. +.... ...|...|.++
T Consensus 152 ~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~--~~~h~~~v~~~ 219 (343)
T 2xzm_R 152 KFS---------SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QIRYT--FKAHESNVNHL 219 (343)
T ss_dssp EEE---------CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EEEEE--EECCSSCEEEE
T ss_pred eee---------eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ceeEE--EcCccccceEE
Confidence 221 0112368889999999997521 14899999999999999543 22222 23577899999
Q ss_pred EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688 234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI 313 (349)
Q Consensus 234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 313 (349)
+|+| ++.+|++|+.|+ .|++||++....+...+. +...|.+++|+|++.+ +++ +.|+.|++||+.+.... ++
T Consensus 220 ~~s~-~g~~l~sgs~dg-~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~-la~-~~d~~v~iw~~~~~~~~---~~ 291 (343)
T 2xzm_R 220 SISP-NGKYIATGGKDK-KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQW-VAV-GTDQGVKIFNLMTQSKA---PV 291 (343)
T ss_dssp EECT-TSSEEEEEETTC-EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCE-EEE-EESSCEEEEESSSCCSC---SE
T ss_pred EECC-CCCEEEEEcCCC-eEEEEECCCCcccceeec-CCCcEEEEEECCCCCE-EEE-ECCCCEEEEEeCCCCCC---ce
Confidence 9999 999999999999 699999965355555543 4567999999999875 654 56888999999874321 12
Q ss_pred EEEe-----------ccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 314 LAYT-----------AAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 314 ~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..+. +|...|.+++|+|++++|++++.||.|++|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 292 CTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp EECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred EEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 2222 57788999999999999999999999999974
No 21
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.2e-41 Score=286.43 Aligned_cols=301 Identities=11% Similarity=0.122 Sum_probs=225.3
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeeec---ccCCeEEEEecccccccccc-------ceEecCCCCeeEEEEec
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE---EYNNKVQIVALNEDISEFGP-------KSTIDHPYPTTKIMWIP 84 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~---~~~g~i~i~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~ 84 (349)
.-..++..+||++++|+| ||++ ||+|+... .-++.|++|+++........ .....|...|.++++.+
T Consensus 7 ~~~~~~~g~PV~sv~fs~--dg~~-l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~ 83 (365)
T 4h5i_A 7 VTASYNVGYPAYGAKFLN--NDTL-LVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK 83 (365)
T ss_dssp CEEEEECSSCEEEEEEEE--TTEE-EEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET
T ss_pred eeeecCCCCCEEEEEEeC--CCcE-EEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC
Confidence 345667789999999999 9995 88886421 12457999998755432211 11125777888887765
Q ss_pred CCCCCCCcEEEEe-----------C-C-cEEEEECCCCCchhhee--ccCCCCCCCcCceeEEEecCCCCCeEEEE--Ec
Q psy17688 85 DRKGVFPDLLATS-----------G-D-YLRVWRAGEPETRLECI--LNNNKNSDFCAPLTSFDWNEVDPNLLGTS--SI 147 (349)
Q Consensus 85 ~~~~~~~~~l~~~-----------~-~-~i~vw~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~--~~ 147 (349)
+ .+++| + | .+++|++.......... ........+...+.+++|+| ++++++++ +.
T Consensus 84 ~-------~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~ 155 (365)
T 4h5i_A 84 G-------IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKV 155 (365)
T ss_dssp T-------EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCS
T ss_pred C-------EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCC
Confidence 4 44432 3 4 79999987654322211 11122222335688899998 99987654 47
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
|++|++||+.+++.. ..+ .|...|.+++|+|++ +++++++.+ .+++|+..+++.........+.
T Consensus 156 d~~i~iwd~~~~~~~-----------~~~-~~~~~V~~v~fspdg---~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEK-----------FEI-ETRGEVKDLHFSTDG---KVVAYITGS-SLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp SCEEEEEETTTTEEE-----------EEE-ECSSCCCEEEECTTS---SEEEEECSS-CEEEEETTTCCEEEEECCCCTT
T ss_pred CCEEEEeECCCCcEE-----------EEe-CCCCceEEEEEccCC---ceEEeccce-eEEEEEeccCcceeeeecCCCC
Confidence 899999999998876 334 477889999999999 899998855 5677777776655444444577
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCCCc---ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVPCT---PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd 301 (349)
..+.+++|+| ++.++++++.++. .+++||+..... ....+.+|...|++++|+|+|++ ||+|+.|+.|+|||
T Consensus 220 ~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd 297 (365)
T 4h5i_A 220 WSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIALVK 297 (365)
T ss_dssp EEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEEEE
T ss_pred CCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEEEE
Confidence 8899999999 9999999988863 478898875222 23456789999999999999998 99999999999999
Q ss_pred eecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 302 IQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+++ .+++..+ .+|..+|++++|+|++++|++++.|++|+||+|
T Consensus 298 ~~~-----~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 298 LKD-----LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp TTT-----TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCC-----CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 988 3456665 689999999999999999999999999999986
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=287.45 Aligned_cols=247 Identities=19% Similarity=0.338 Sum_probs=211.9
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID 148 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (349)
.+|.+.|++++|+|++.. ...+|++|+ | +|+||++..........+.+|. ..|.+++|++ ++.++++++.|
T Consensus 29 ~~H~~~V~~v~~~~~~~~-~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~-----~~v~~~~~~~-~~~~l~s~s~D 101 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKE-NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ-----LGVVSVDISH-TLPIAASSSLD 101 (321)
T ss_dssp TSSSSCEEEEEEC--------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECS-SSSEEEEEETT
T ss_pred ccCCCcEEEEEEecCCCC-CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC-----CCEEEEEECC-CCCEEEEEeCC
Confidence 479999999999986320 011888888 6 9999999876433333444444 7899999998 88999999999
Q ss_pred CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688 149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
+.|++||+.+++.+ ..+..|...+.+++|+|++ ++|++++.|+.|++||+++++....+. .+..
T Consensus 102 ~~i~lWd~~~~~~~-----------~~~~~~~~~~~~~~~spdg---~~l~~g~~dg~v~i~~~~~~~~~~~~~--~~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQI-----------KSIDAGPVDAWTLAFSPDS---QYLATGTHVGKVNIFGVESGKKEYSLD--TRGK 165 (321)
T ss_dssp SEEEEEETTTTEEE-----------EEEECCTTCCCCEEECTTS---SEEEEECTTSEEEEEETTTCSEEEEEE--CSSS
T ss_pred CcEEEEECCCCCEE-----------EEEeCCCccEEEEEECCCC---CEEEEEcCCCcEEEEEcCCCceeEEec--CCCc
Confidence 99999999998887 5677888899999999999 899999999999999999877554443 4567
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~ 308 (349)
.+.+++|+| ++++|++|+.|+ .|++||+++ ++.+..+.+|..+|++++|+|++++ |++++.|+.|++||++.
T Consensus 166 ~v~~~~~sp-dg~~lasg~~dg-~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~---- 237 (321)
T 3ow8_A 166 FILSIAYSP-DGKYLASGAIDG-IINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQH---- 237 (321)
T ss_dssp CEEEEEECT-TSSEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCE-EEEECTTSCEEEEETTT----
T ss_pred eEEEEEECC-CCCEEEEEcCCC-eEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCC----
Confidence 899999999 999999999999 599999997 8889999999999999999999998 99999999999999987
Q ss_pred CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
......+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus 238 -~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 238 -ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp -CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 4457788999999999999999999999999999999985
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.4e-41 Score=303.47 Aligned_cols=272 Identities=17% Similarity=0.334 Sum_probs=231.9
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.+|++++|+| ++++ |++++. ++.|++|+++.. .+ .....|...|.+++|+|+++ +|++++ + .
T Consensus 304 ~~v~~~~~~~--~~~~-l~t~~~----d~~i~~w~~~~~--~~--~~~~~~~~~v~~~~~s~~g~-----~l~~~~~dg~ 367 (577)
T 2ymu_A 304 SSVWGVAFSP--DGQT-IASASD----DKTVKLWNRNGQ--HL--QTLTGHSSSVWGVAFSPDGQ-----TIASASDDKT 367 (577)
T ss_dssp SCEEEEEECT--TSSE-EEEEET----TSCEEEEETTSC--EE--EEECCCSSCEEEEEECTTSS-----EEEEEETTSE
T ss_pred CCeEEEEECC--CCCE-EEEEeC----CCeEEEEeCCCC--ee--EEEeCCCCCEEEEEECCCCC-----EEEEEeCCCE
Confidence 6899999998 9995 999988 999999987532 22 22457889999999999998 888887 5 9
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|++|+.... ....+..| ...|.+++|+| ++++|++++.|+.|++||.. ++.. ..+.+|.
T Consensus 368 v~~~~~~~~---~~~~~~~~-----~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~~-~~~~-----------~~~~~~~ 426 (577)
T 2ymu_A 368 VKLWNRNGQ---LLQTLTGH-----SSSVRGVAFSP-DGQTIASASDDKTVKLWNRN-GQLL-----------QTLTGHS 426 (577)
T ss_dssp EEEEETTCC---EEEEEECC-----SSCEEEEEECT-TSSCEEEEETTSEEEEECTT-CCEE-----------EEEECCS
T ss_pred EEEEcCCCC---EEEEecCC-----CCCeEEEEECC-CCCEEEEEeCCCEEEEEeCC-CCEE-----------EEecCCC
Confidence 999996532 22333333 37899999998 99999999999999999964 4444 5678999
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~ 260 (349)
..|.+++|+|++ ++|++++.|+.|++||... +....+ ..+...|.+++|+| ++.+|++++.|+ .|++||..
T Consensus 427 ~~v~~~~~s~d~---~~l~~~~~d~~v~~w~~~~-~~~~~~--~~~~~~v~~~~~sp-d~~~las~~~d~-~i~iw~~~- 497 (577)
T 2ymu_A 427 SSVWGVAFSPDD---QTIASASDDKTVKLWNRNG-QLLQTL--TGHSSSVRGVAFSP-DGQTIASASDDK-TVKLWNRN- 497 (577)
T ss_dssp SCEEEEEECTTS---SEEEEEETTSEEEEEETTS-CEEEEE--ECCSSCEEEEEECT-TSCEEEEEETTS-EEEEEETT-
T ss_pred CCeEEEEECCCC---CEEEEEcCCCEEEEEECCC-CEEEEE--cCCCCCEEEEEEcC-CCCEEEEEeCCC-EEEEEcCC-
Confidence 999999999999 8999999999999999754 333332 35778999999999 999999999999 69999964
Q ss_pred CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688 261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY 340 (349)
Q Consensus 261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 340 (349)
++.+..+.+|...|++++|+|++++ |++++.||.|++||.. .+++..+.+|.+.|++++|+|++++|++++.
T Consensus 498 -~~~~~~~~~h~~~v~~l~~s~dg~~-l~s~~~dg~v~lwd~~------~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 498 -GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp -SCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTT------SCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred -CCEEEEEeCCCCCEEEEEEcCCCCE-EEEEECcCEEEEEeCC------CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 7888999999999999999999999 9999999999999953 3467889999999999999999999999999
Q ss_pred CCeEEEee
Q psy17688 341 NKYLEVLR 348 (349)
Q Consensus 341 d~~v~vw~ 348 (349)
|++|++|+
T Consensus 570 D~~i~~Wd 577 (577)
T 2ymu_A 570 DKTVKLWN 577 (577)
T ss_dssp TSCEEEEC
T ss_pred CCEEEEeC
Confidence 99999996
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=285.18 Aligned_cols=256 Identities=14% Similarity=0.219 Sum_probs=202.2
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
....+....+|++++|+| ++. |++|+. +|.|+||+++........ ....+|.+.|++++|+|+++ +
T Consensus 75 ~~~~~~~~~~v~~~~~s~--d~~--l~~~s~----dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-----~ 141 (344)
T 4gqb_B 75 CSAGVQTEAGVADLTWVG--ERG--ILVASD----SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-----Q 141 (344)
T ss_dssp CSEEEEESSCEEEEEEET--TTE--EEEEET----TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-----E
T ss_pred eeeeeccCCCEEEEEEeC--CCe--EEEEEC----CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-----E
Confidence 344455567899999998 764 888988 999999998754322221 22347999999999999998 8
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
|++|+ | .|++||+.+++. ...+.+| ...|.+++|++....+|++|+.|+.|++||+++++....+
T Consensus 142 l~sgs~d~~i~iwd~~~~~~--~~~~~~h-----~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~------ 208 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVV--LSSYRAH-----AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI------ 208 (344)
T ss_dssp EEEEETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC------
T ss_pred EEEEeCCCeEEEEECCCCcE--EEEEcCc-----CCceEEEEecCCCCCceeeeccccccccccccccceeeee------
Confidence 88888 5 999999988642 2334444 4899999999855568999999999999999998876321
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
....|...+.+++|+|++. ++|++|+.||.|++||+++++....+. .|...|.+++|+|++..+|++|+.|+
T Consensus 209 ---~~~~~~~~~~~~~~~p~~~--~~l~sg~~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~- 280 (344)
T 4gqb_B 209 ---GCSAPGYLPTSLAWHPQQS--EVFVFGDENGTVSLVDTKSTSCVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDC- 280 (344)
T ss_dssp ---C----CCCEEEEEECSSCT--TEEEEEETTSEEEEEESCC--CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTS-
T ss_pred ---ecceeeccceeeeecCCCC--cceEEeccCCcEEEEECCCCcEEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCC-
Confidence 1234556789999999763 789999999999999999987655543 57889999999994457899999999
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
+|++||++. ++ +..+.+|.+.|++++|+|+++.+|++++.|++|++|++...+
T Consensus 281 ~i~vwd~~~-~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 281 SLAVLDSSL-SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEECTTC-CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eEEEEECCC-Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 599999986 44 456789999999999999999878899999999999998743
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=287.69 Aligned_cols=293 Identities=15% Similarity=0.291 Sum_probs=229.5
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC---CCCCCCcEEEEe
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD---RKGVFPDLLATS 97 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~ 97 (349)
+..+|++++|+| +++..+++|+. ...+|.|+||++.. ++.......+|...|.+++|+|+ +. +|+++
T Consensus 17 h~~~v~~~~~~p--~~~~l~~~~s~-~~~d~~v~iw~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~l~~~ 86 (357)
T 3i2n_A 17 FNYTVFDCKWVP--CSAKFVTMGNF-ARGTGVIQLYEIQH--GDLKLLREIEKAKPIKCGTFGATSLQQR-----YLATG 86 (357)
T ss_dssp CSSCEEEEEECT--TSSEEEEEEC---CCCEEEEEEEECS--SSEEEEEEEEESSCEEEEECTTCCTTTC-----CEEEE
T ss_pred CCCceEEEEEcC--CCceEEEecCc-cCCCcEEEEEeCCC--CcccceeeecccCcEEEEEEcCCCCCCc-----eEEEe
Confidence 447999999999 88753455532 11279999998873 44444445589999999999998 45 77777
Q ss_pred C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe------cCCCCCeEEEEEcCCeEEEEeccCcc-eeeeeccc
Q psy17688 98 G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW------NEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSV 168 (349)
Q Consensus 98 ~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~ 168 (349)
+ + .|++|++.+.+.. ...+..| ...|.+++| +| ++++|++++.||.|++||+.+++ ..
T Consensus 87 ~~dg~i~iwd~~~~~~~-~~~~~~~-----~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~------ 153 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMP-VYSVKGH-----KEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPV------ 153 (357)
T ss_dssp ETTSCEEEECTTSCSSC-SEEECCC-----SSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCS------
T ss_pred cCCCeEEEEeCCCCCcc-EEEEEec-----ccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcc------
Confidence 6 6 9999999876522 2233333 478999965 55 88899999999999999999876 34
Q ss_pred CCceeeeeeccCC----ceeeEE----EecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC--
Q psy17688 169 SGHVKTQLIAHDK----EVYDIA----FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-- 238 (349)
Q Consensus 169 ~~~~~~~~~~~~~----~v~~~~----~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 238 (349)
..+..|.. .+.+++ |+|++ +++++++.|+.|++||+++++.... ..+...+.+++|+|.
T Consensus 154 -----~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 154 -----ANMEPVQGENKRDCWTVAFGNAYNQEE---RVVCAGYDNGDIKLFDLRNMALRWE---TNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp -----EEECCCTTSCCCCEEEEEEECCCC-CC---CEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEESCSSS
T ss_pred -----eeccccCCCCCCceEEEEEEeccCCCC---CEEEEEccCCeEEEEECccCceeee---cCCCCceEEEEcCCCCC
Confidence 34444443 788888 67888 8999999999999999998765332 346789999999996
Q ss_pred CCCeEEEEeeCCcEEEEEeccCCCcceeEee-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----
Q psy17688 239 DPNYLAMVAMNACEVIILDVRVPCTPVARLN-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI---- 309 (349)
Q Consensus 239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~---- 309 (349)
++.+|++++.|+ .|++||++. .++...+. +|...|++++|+|+++.+|++++.||.|++||++......
T Consensus 223 ~~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 223 SMNKLVATSLEG-KFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp SCCEEEEEESTT-EEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCCEEEEECCCC-eEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 688999999999 699999987 55555544 8999999999999998449999999999999998754321
Q ss_pred ----------CCcEEEEeccCCceEEEEEcCCCCceE-EEEcCCeEEEeeC
Q psy17688 310 ----------EDPILAYTAAGGEINQIQWGATQPDWI-AICYNKYLEVLRV 349 (349)
Q Consensus 310 ----------~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~vw~v 349 (349)
..++..+..|...|++++|+|+++.|+ +++.|+.|++|++
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 025677888999999999999999998 6888999999985
No 26
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5e-41 Score=287.21 Aligned_cols=293 Identities=14% Similarity=0.156 Sum_probs=230.9
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D 99 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~ 99 (349)
...+|++++|+| ++++ ||+|+. ++.|++|+++....+.. ....+|...|.+++|+|+++ +|++++ |
T Consensus 7 ~~~~i~~~~~s~--~~~~-l~~~~~----d~~v~i~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~-----~l~~~~~d 73 (372)
T 1k8k_C 7 LVEPISCHAWNK--DRTQ-IAICPN----NHEVHIYEKSGNKWVQV-HELKEHNGQVTGVDWAPDSN-----RIVTCGTD 73 (372)
T ss_dssp CSSCCCEEEECT--TSSE-EEEECS----SSEEEEEEEETTEEEEE-EEEECCSSCEEEEEEETTTT-----EEEEEETT
T ss_pred cCCCeEEEEECC--CCCE-EEEEeC----CCEEEEEeCCCCcEEee-eeecCCCCcccEEEEeCCCC-----EEEEEcCC
Confidence 347899999998 9996 999988 99999998864321122 22347999999999999998 888877 5
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++|++.+.+......... +...|.+++|+| ++++|++++.||.|++||++.+..... .......
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~-------~~~~~~~ 140 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILR-----INRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWV-------CKHIKKP 140 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCC-----CSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEE-------EEEECTT
T ss_pred CeEEEEECCCCeeeeeEEeec-----CCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCccee-------eeeeecc
Confidence 99999997764322222222 347899999998 899999999999999999998764210 0123367
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC------------------CCCceeeeeeCCCCCceeEEEEeCCCC
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR------------------HLEHSTIIYEDPQHTPLLRLAWNKQDP 240 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~ 240 (349)
|...|.+++|+|++ ++|++++.|+.|++||++ .++... ....+...+.+++|+| ++
T Consensus 141 ~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~ 214 (372)
T 1k8k_C 141 IRSTVLSLDWHPNS---VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF--ESSSSCGWVHGVCFSA-NG 214 (372)
T ss_dssp CCSCEEEEEECTTS---SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEE--ECCCCSSCEEEEEECS-SS
T ss_pred cCCCeeEEEEcCCC---CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheE--ecCCCCCeEEEEEECC-CC
Confidence 88999999999998 899999999999999975 222222 2235778899999999 89
Q ss_pred CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec--CC------------
Q psy17688 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ--MP------------ 306 (349)
Q Consensus 241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~--~~------------ 306 (349)
.+|++++.|+ .|++||+++ ++++..+..|...|.+++|+|++.+ |+++ .|+.|++||++. +.
T Consensus 215 ~~l~~~~~d~-~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 290 (372)
T 1k8k_C 215 SRVAWVSHDS-TVCLADADK-KMAVATLASETLPLLAVTFITESSL-VAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ 290 (372)
T ss_dssp SEEEEEETTT-EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEE-EEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred CEEEEEeCCC-EEEEEECCC-CceeEEEccCCCCeEEEEEecCCCE-EEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence 9999999999 699999997 7889999999999999999999986 7777 899999999987 21
Q ss_pred ---------------CCCCCcE------EEE-eccCCceEEEEEc-CCC---CceEEEEcCCeEEEeeC
Q psy17688 307 ---------------RAIEDPI------LAY-TAAGGEINQIQWG-ATQ---PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 307 ---------------~~~~~~~------~~~-~~~~~~v~~~~~~-~~~---~~l~~~~~d~~v~vw~v 349 (349)
....... ..+ .+|...|++++|+ +++ .+|++++.||.|++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 0000010 122 4789999999977 565 88999999999999984
No 27
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-42 Score=299.31 Aligned_cols=298 Identities=17% Similarity=0.323 Sum_probs=236.5
Q ss_pred CCceeeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA 95 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 95 (349)
..+|.+++|+| +++.+||+|+..+ ..++.|+||++...... .......|...|++++|+|++. +|+
T Consensus 12 ~~~v~~~~~sp--~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~-----~l~ 83 (416)
T 2pm9_A 12 FSRTATFAWSH--DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-KPIASLQVDSKFNDLDWSHNNK-----IIA 83 (416)
T ss_dssp EEESCBCCBCS--SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-SCSCCCCCSSCEEEEEECSSSS-----CEE
T ss_pred hhhcceEeeCC--CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-cEEEEEecCCceEEEEECCCCC-----eEE
Confidence 35789999999 8873389983211 12899999998754221 1223446889999999999998 777
Q ss_pred EeC-C-cEEEEECCCCCc--hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc------eeeee
Q psy17688 96 TSG-D-YLRVWRAGEPET--RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ------VVGRV 165 (349)
Q Consensus 96 ~~~-~-~i~vw~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~ 165 (349)
+++ | .|++|++..... .....+.. |...|.+++|+|.++.+|++++.||.|++||+.+++ ...
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-- 156 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAINSMARFSN-----HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL-- 156 (416)
T ss_dssp EEESSSCEEEECCSSTTSCCCEEEECCC-----SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB--
T ss_pred EEccCCeEEEeecccccccccchhhccC-----CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc--
Confidence 776 5 999999987211 12223333 447899999998448999999999999999999876 221
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----CCCceeEEEEeCCCCC
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----QHTPLLRLAWNKQDPN 241 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ 241 (349)
....+..|...|.+++|+|++. .++++++.|+.|++||+++++....+.... +...+.+++|+|.+..
T Consensus 157 ------~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (416)
T 2pm9_A 157 ------TPGQSMSSVDEVISLAWNQSLA--HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST 228 (416)
T ss_dssp ------CCCCSCCSSCCCCEEEECSSCT--TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT
T ss_pred ------ccccccCCCCCeeEEEeCCCCC--cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC
Confidence 0123467889999999999832 799999999999999999876554443211 1688999999994457
Q ss_pred eEEEEeeCC---cEEEEEeccCCCcceeEee-cCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE
Q psy17688 242 YLAMVAMNA---CEVIILDVRVPCTPVARLN-NHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY 316 (349)
Q Consensus 242 ~l~~~~~d~---~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 316 (349)
++++++.++ . |++||++....++..+. +|...|++++|+| ++.+ |++++.|+.|++||+++ .+++..+
T Consensus 229 ~l~~~~~d~~~~~-i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-l~s~~~dg~v~~wd~~~-----~~~~~~~ 301 (416)
T 2pm9_A 229 RVATATGSDNDPS-ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL-LLSSGRDNTVLLWNPES-----AEQLSQF 301 (416)
T ss_dssp EEEEEECCSSSCC-CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC-EEEEESSSEEEEECSSS-----CCEEEEE
T ss_pred EEEEEECCCCCce-EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe-EEEEeCCCCEEEeeCCC-----Cccceee
Confidence 999999987 6 99999998557788888 8999999999999 7887 99999999999999988 4567888
Q ss_pred eccCCceEEEEEcCCC-CceEEEEcCCeEEEeeC
Q psy17688 317 TAAGGEINQIQWGATQ-PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 317 ~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vw~v 349 (349)
..|...|.+++|+|++ ..+++++.|+.|++|++
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 9999999999999998 67788888999999985
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-41 Score=281.21 Aligned_cols=253 Identities=15% Similarity=0.225 Sum_probs=203.0
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEc
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSI 147 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~ 147 (349)
.+|...|++++|+|+++ +||+|+ | +|+||++..........+.+|. .+|.+++|++. ++++|++|+.
T Consensus 6 ~~h~~~V~~~~~s~~g~-----~las~s~D~~v~iw~~~~~~~~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGK-----RMATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp CSCSSCEEEEEECTTSS-----EEEEEETTSCEEEEEBCSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEEEEET
T ss_pred cCCcCceEEEEECCCCC-----EEEEEeCCCEEEEEecCCCCcEEEEEEcccc-----CCeEEEEecCCCcCCEEEEEcC
Confidence 47999999999999998 888888 6 9999999764333334455544 89999999863 4789999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP 225 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 225 (349)
||+|++||+++++.. ....+.+|...|.+++|+|+ + .+|++++.|+.|++||++............
T Consensus 76 D~~v~iWd~~~~~~~---------~~~~~~~h~~~v~~v~~~p~~~g---~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 76 DGKVMIWKEENGRWS---------QIAVHAVHSASVNSVQWAPHEYG---PMLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp TTEEEEEEBSSSCBC---------CCEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred CCEEEEEEcCCCceE---------EEEEeecCCCceeEEEeCcCCCC---cEEEEEECCCcEEEEEecCCCceeeeeeec
Confidence 999999999876422 11456789999999999997 6 799999999999999998764322222345
Q ss_pred CCCceeEEEEeCCC------------CCeEEEEeeCCcEEEEEeccCCCc---ceeEeecCCcceEEEEEeeCC---CCE
Q psy17688 226 QHTPLLRLAWNKQD------------PNYLAMVAMNACEVIILDVRVPCT---PVARLNNHRACVNGIAWAPHS---SCH 287 (349)
Q Consensus 226 ~~~~v~~~~~~~~~------------~~~l~~~~~d~~~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~p~~---~~~ 287 (349)
|...|.+++|+|.. +.+|++|+.|+ .|++||++.... ....+.+|...|.+++|+|++ .+
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~- 221 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY- 221 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE-
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE-
Confidence 77899999999931 57999999999 599999986221 456788999999999999995 55
Q ss_pred EEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 288 ICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++++.|++|++||++..... .....+ ..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 222 las~s~D~~v~iWd~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 222 MASVSQDRTCIIWTQDNEQGP--WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp EEEEETTSCEEEEEESSTTSC--CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred EEEEECCCcEEEEEeCCCCCc--cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 999999999999999874321 111222 456789999999999999999999999999973
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-42 Score=298.77 Aligned_cols=308 Identities=14% Similarity=0.222 Sum_probs=239.4
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecC-CCCCCCc
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPD-RKGVFPD 92 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~ 92 (349)
.+..+....+|++++|+| ++++ ||+|+. +|.|++|++..... .........|...|.+++|+|+ +.
T Consensus 60 ~~~~~~~~~~v~~~~~s~--~~~~-l~~~~~----dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----- 127 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSH--NNKI-IAGALD----NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN----- 127 (416)
T ss_dssp CSCCCCCSSCEEEEEECS--SSSC-EEEEES----SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-----
T ss_pred EEEEEecCCceEEEEECC--CCCe-EEEEcc----CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-----
Confidence 444555668999999998 9996 999988 99999999875211 1122334479999999999998 55
Q ss_pred EEEEeC-C-cEEEEECCCCCchhh--eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLE--CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (349)
+|++++ | .|++||+.+.+.... ..........|...|.+++|+|..+.+|++++.||.|++||+++++..
T Consensus 128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~------ 201 (416)
T 2pm9_A 128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV------ 201 (416)
T ss_dssp BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE------
T ss_pred EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc------
Confidence 788877 5 999999987641110 111111223455789999999844889999999999999999998877
Q ss_pred CCceeeeeecc------CCceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC
Q psy17688 169 SGHVKTQLIAH------DKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD 239 (349)
Q Consensus 169 ~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 239 (349)
..+..+ ...|.+++|+|++. .++++++.|+ .|++||+++++.........+...|.+++|+|.+
T Consensus 202 -----~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 202 -----IHLSYTSPNSGIKQQLSVVEWHPKNS--TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp -----EEECCCCCSSCCCCCEEEEEECSSCT--TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred -----eEEeccccccccCCceEEEEECCCCC--CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 334444 78899999999873 6899999999 9999999986432222221477899999999978
Q ss_pred CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc-------
Q psy17688 240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP------- 312 (349)
Q Consensus 240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------- 312 (349)
+.+|++++.|+ .|++||+++ ++++..+..|...|.+++|+|+++.+|++++.|+.|++||+..........
T Consensus 275 ~~~l~s~~~dg-~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 352 (416)
T 2pm9_A 275 EHLLLSSGRDN-TVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQ 352 (416)
T ss_dssp SSCEEEEESSS-EEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC--------
T ss_pred CCeEEEEeCCC-CEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCccccccccccc
Confidence 99999999999 699999998 788999999999999999999994449999999999999998755322110
Q ss_pred ---EEEE--------------------eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 313 ---ILAY--------------------TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 313 ---~~~~--------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...+ ..|..++.+++|+|+|++|++++.|+.|+||++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 353 ESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp --------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred CCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 0001 115667889999999998888888999999986
No 30
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-41 Score=290.34 Aligned_cols=242 Identities=17% Similarity=0.315 Sum_probs=215.2
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
..+|..+|++++|+|++. +|++|+ | .|+|||+.+++. ...+.+|. ..|.+++|+| ++++|++|+.
T Consensus 104 l~gh~~~V~~~~~~p~~~-----~l~s~s~Dg~i~vwd~~~~~~--~~~l~~h~-----~~V~~v~~~~-~~~~l~sgs~ 170 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWDYETGDF--ERTLKGHT-----DSVQDISFDH-SGKLLASCSA 170 (410)
T ss_dssp EECCSSCEEEEEECSSSS-----EEEEEESSSCEEEEETTTCCC--CEEECCCS-----SCEEEEEECT-TSSEEEEEET
T ss_pred ecccCCcEEEEEEcCCCC-----EEEEEeCCCeEEEEECCCCcE--EEEEeccC-----CcEEEEEEcC-CCCEEEEEeC
Confidence 458999999999999998 888887 5 999999988753 33444444 7899999998 8999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
||+|++||+.+++.+ ..+.+|...|.+++|+|++ ++|++++.|+.|++||++++.+...+. .+.
T Consensus 171 D~~i~iwd~~~~~~~-----------~~~~~h~~~V~~v~~~p~~---~~l~s~s~D~~i~~wd~~~~~~~~~~~--~h~ 234 (410)
T 1vyh_C 171 DMTIKLWDFQGFECI-----------RTMHGHDHNVSSVSIMPNG---DHIVSASRDKTIKMWEVQTGYCVKTFT--GHR 234 (410)
T ss_dssp TSCCCEEETTSSCEE-----------ECCCCCSSCEEEEEECSSS---SEEEEEETTSEEEEEETTTCCEEEEEE--CCS
T ss_pred CCeEEEEeCCCCcee-----------EEEcCCCCCEEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcEEEEEe--CCC
Confidence 999999999988776 5678999999999999999 899999999999999999987655443 577
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeC--------------------CCCE
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPH--------------------SSCH 287 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~--------------------~~~~ 287 (349)
..+.+++|+| ++.+|++|+.|+ .|++||++. ......+.+|...|.+++|+|+ +.+
T Consensus 235 ~~v~~~~~~~-~g~~l~s~s~D~-~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 310 (410)
T 1vyh_C 235 EWVRMVRPNQ-DGTLIASCSNDQ-TVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF- 310 (410)
T ss_dssp SCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE-
T ss_pred ccEEEEEECC-CCCEEEEEcCCC-eEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE-
Confidence 8899999999 999999999999 699999997 7888889999999999999997 455
Q ss_pred EEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 288 ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++|+.|+.|++||+++ ..++..+.+|...|++++|+|++++|++++.|+.|++|++
T Consensus 311 l~sgs~D~~i~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEEEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEEEeCCCeEEEEECCC-----CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999999987 4467888999999999999999999999999999999985
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-39 Score=277.78 Aligned_cols=298 Identities=13% Similarity=0.166 Sum_probs=243.8
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
......+..+ .+|++++|+| ++++ ||+|+. +|.|++|++.. ++... ....|...|.+++|+|+++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~--~~~~-l~~~~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~~~~---- 87 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNK--EGDL-LFSCSK----DSSASVWYSLN--GERLG-TLDGHTGTIWSIDVDCFTK---- 87 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECT--TSCE-EEEEES----SSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS----
T ss_pred ccccEEEEEeeceEEEEEEcC--CCCE-EEEEeC----CCEEEEEeCCC--chhhh-hhhhcCCcEEEEEEcCCCC----
Confidence 3344455555 7999999999 9996 999988 99999998863 33332 2446899999999999988
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----CeEEEEeccCcceeee
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----TTCTIWCLETNQVVGR 164 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~ 164 (349)
+|++++ | .|++||+.+++... .+. +...+.+++|+| ++..+++++.+ |.|.+||+........
T Consensus 88 -~l~s~~~dg~i~iwd~~~~~~~~--~~~------~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 88 -YCVTGSADYSIKLWDVSNGQCVA--TWK------SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp -EEEEEETTTEEEEEETTTCCEEE--EEE------CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred -EEEEEeCCCeEEEEECCCCcEEE--Eee------cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCcccee
Confidence 788777 5 99999998865322 222 236899999998 99999999999 9999999988765544
Q ss_pred ecccCCceeeeeeccCC--ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-CceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688 165 VNSVSGHVKTQLIAHDK--EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQHTPLLRLAWNKQDPN 241 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~ 241 (349)
+..........+..|.. .+.+++|+|++ +++++++.||.|++||+++. +....+ ..+...|.+++|+| ++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~ 231 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKG---KYIIAGHKDGKISKYDVSNNYEYVDSI--DLHEKSISDMQFSP-DLT 231 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGG---CEEEEEETTSEEEEEETTTTTEEEEEE--ECCSSCEEEEEECT-TSS
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCC---CEEEEEcCCCEEEEEECCCCcEeEEEE--ecCCCceeEEEECC-CCC
Confidence 43333334455667776 89999999999 89999999999999999984 333332 24678999999999 999
Q ss_pred eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--------------cEEEEEeecCCC
Q psy17688 242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--------------QALIWDIQQMPR 307 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--------------~v~iwd~~~~~~ 307 (349)
+|++++.|+ .|++||+++ .+.+..+. +...+..++|+|++++ +++++.++ .+++||+..
T Consensus 232 ~l~~~~~d~-~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--- 304 (369)
T 3zwl_B 232 YFITSSRDT-NSFLVDVST-LQVLKKYE-TDCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYHKIF--- 304 (369)
T ss_dssp EEEEEETTS-EEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSE-EEEEECCC-------------CEEEEEETTT---
T ss_pred EEEEecCCc-eEEEEECCC-Cceeeeec-CCCCceeEEecCCCce-EEEeecCCCceEEEEecCCCcceeEEEecCC---
Confidence 999999999 699999997 77777776 6789999999999998 88888887 899999887
Q ss_pred CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 308 AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 308 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..++..+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus 305 --~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 305 --EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp --CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred --CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 4567888999999999999999999999999999999984
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6e-40 Score=277.06 Aligned_cols=294 Identities=15% Similarity=0.168 Sum_probs=229.5
Q ss_pred eeeecC-CceeeEEEeecCC-CceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688 17 YKYEAP-WPLYSMNWSVRPD-KLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGVFPD 92 (349)
Q Consensus 17 ~~~~~~-~~v~~~~~sp~~~-~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~ 92 (349)
.+++.+ .+|++++|+| + +++ ||+|+. |+.|+||++....... ......+|...|.+++|+|+++
T Consensus 32 ~tL~GH~~~V~~v~~sp--~~~~~-l~S~s~----D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~----- 99 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTP--QFPDM-ILSASR----DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ----- 99 (340)
T ss_dssp EEECCCSSCEEEEEECT--TCTTE-EEEEET----TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-----
T ss_pred EEECCccCCEEEEEEeC--CCCCE-EEEEcC----CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-----
Confidence 346655 7999999998 6 565 999998 9999999997543221 1222347899999999999998
Q ss_pred EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
+|++++ | .|++|+........ ....+ ...+..+.+++ .+..|++|+.|+.+++||+.......
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~------- 164 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTR--RFVGH-----TKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYT------- 164 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE--EEECC-----SSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE-------
T ss_pred EEEEEcccccceEEeecccceee--eecCC-----CCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEE-------
Confidence 888887 6 99999998764322 12222 25677788887 88999999999999999987765542
Q ss_pred ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
....+|...+..++|++++. ..++++++.|+.|++||+++++..... ..+..+|.+++|+| ++.+|++|+.|+
T Consensus 165 ---~~~~~~~~~v~~~~~~~~~~-~~~~~s~~~d~~i~i~d~~~~~~~~~~--~~h~~~v~~~~~s~-~~~~l~s~s~Dg 237 (340)
T 4aow_A 165 ---VQDESHSEWVSCVRFSPNSS-NPIIVSCGWDKLVKVWNLANCKLKTNH--IGHTGYLNTVTVSP-DGSLCASGGKDG 237 (340)
T ss_dssp ---ECSSSCSSCEEEEEECSCSS-SCEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTC
T ss_pred ---EEeccccCcccceEEccCCC-CcEEEEEcCCCEEEEEECCCCceeeEe--cCCCCcEEEEEECC-CCCEEEEEeCCC
Confidence 34577899999999998752 257889999999999999987654443 35778999999999 999999999999
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC----CCCCcEEEEeccCCceEEE
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR----AIEDPILAYTAAGGEINQI 326 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~ 326 (349)
.|++||++. .+++..+.. ...|..+.|+|++. +++++.|+.|++||++.... ...........|...|+++
T Consensus 238 -~i~iwd~~~-~~~~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 312 (340)
T 4aow_A 238 -QAMLWDLNE-GKHLYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 312 (340)
T ss_dssp -EEEEEETTT-TEEEEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred -eEEEEEecc-CceeeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence 699999997 777777775 46899999999875 56677899999999976321 0011223345678899999
Q ss_pred EEcCCCCceEEEEcCCeEEEeeC
Q psy17688 327 QWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 327 ~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+|+|++++|++++.||.|+||++
T Consensus 313 ~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 313 AWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeC
Confidence 99999999999999999999985
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-40 Score=286.87 Aligned_cols=303 Identities=15% Similarity=0.219 Sum_probs=239.9
Q ss_pred eeeeecCCceeeEEEeecCCCc-eEEEEEeeecccCCeEEEEec----cccccc----cccceEe---------cCCCCe
Q psy17688 16 IYKYEAPWPLYSMNWSVRPDKL-FRLAIGSYVEEYNNKVQIVAL----NEDISE----FGPKSTI---------DHPYPT 77 (349)
Q Consensus 16 ~~~~~~~~~v~~~~~sp~~~~~-~~la~g~~~~~~~g~i~i~~~----~~~~~~----~~~~~~~---------~~~~~v 77 (349)
+..+....+|++++|+| +++ + ||+|+. +|.|++|++ ...... ....... +|...|
T Consensus 39 ~~~~~~~~~v~~~~~s~--~~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNP--LDESI-LAYGEK----NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV 111 (425)
T ss_dssp CEEEEECSCCSEEEECS--SCTTE-EEEEET----BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE
T ss_pred eeeeeccCceEEEEECC--CCCcE-EEEecC----CceEEEEEEecccCCccccccccccccccccccccccccCCCCce
Confidence 33444458999999999 888 7 999988 999999999 533210 1111000 156799
Q ss_pred eEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688 78 TKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC 155 (349)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd 155 (349)
++++|+|+++ +|++++ + .|++|+.... ....+.. |...|.+++|+| ++++|++++.||.|++||
T Consensus 112 ~~~~~s~~~~-----~l~~~~~dg~i~i~~~~~~---~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 112 TCLAWSHDGN-----SIVTGVENGELRLWNKTGA---LLNVLNF-----HRAPIVSVKWNK-DGTHIISMDVENVTILWN 177 (425)
T ss_dssp EEEEECTTSS-----EEEEEETTSCEEEEETTSC---EEEEECC-----CCSCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred EEEEEcCCCC-----EEEEEeCCCeEEEEeCCCC---eeeeccC-----CCccEEEEEECC-CCCEEEEEecCCeEEEEE
Confidence 9999999998 888877 5 9999994322 2233333 347899999998 899999999999999999
Q ss_pred ccCcceeeeeccc---------------------------------------------CCceeeeeeccCCceeeEEEec
Q psy17688 156 LETNQVVGRVNSV---------------------------------------------SGHVKTQLIAHDKEVYDIAFSR 190 (349)
Q Consensus 156 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~v~~~~~~~ 190 (349)
+.+++....+... .+.....+..|...|.+++|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 9988776544221 1123345667899999999999
Q ss_pred CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN 270 (349)
Q Consensus 191 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~ 270 (349)
++ ++|++++.|+.|++||+++++....+ ..+...+.+++|+| ++ ++++++.|+ .|++||+++ ++.+..+..
T Consensus 258 ~~---~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~-~~-~l~~~~~d~-~i~i~d~~~-~~~~~~~~~ 328 (425)
T 1r5m_A 258 TN---KLLLSASDDGTLRIWHGGNGNSQNCF--YGHSQSIVSASWVG-DD-KVISCSMDG-SVRLWSLKQ-NTLLALSIV 328 (425)
T ss_dssp TT---TEEEEEETTSCEEEECSSSBSCSEEE--CCCSSCEEEEEEET-TT-EEEEEETTS-EEEEEETTT-TEEEEEEEC
T ss_pred CC---CEEEEEcCCCEEEEEECCCCccceEe--cCCCccEEEEEECC-CC-EEEEEeCCC-cEEEEECCC-CcEeEeccc
Confidence 99 89999999999999999987655444 34778999999999 67 999999999 699999997 888888999
Q ss_pred CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC---------------CCCcEEEEeccCC--ceEEEEEcCCCC
Q psy17688 271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA---------------IEDPILAYTAAGG--EINQIQWGATQP 333 (349)
Q Consensus 271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~---------------~~~~~~~~~~~~~--~v~~~~~~~~~~ 333 (349)
|...|.+++|+|++++ |++++.||.|++||++..... ...++..+..|.. .|.+++|+|+++
T Consensus 329 ~~~~i~~~~~s~~~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 407 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQK-YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN 407 (425)
T ss_dssp TTCCEEEEEECTTSSE-EEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred CCccEEEEEEcCCCCE-EEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence 9999999999999998 999999999999999874310 0115677888866 999999999999
Q ss_pred ceEEEEcCCeEEEeeC
Q psy17688 334 DWIAICYNKYLEVLRV 349 (349)
Q Consensus 334 ~l~~~~~d~~v~vw~v 349 (349)
+|++++.|+.|++|++
T Consensus 408 ~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 408 KISVAYSLQEGSVVAI 423 (425)
T ss_dssp EEEEEESSSCCEEEEC
T ss_pred eEEEEecCceEEEEee
Confidence 9999999999999986
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-40 Score=285.08 Aligned_cols=288 Identities=13% Similarity=0.124 Sum_probs=222.4
Q ss_pred eeeeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEec-CCCCCCC
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIP-DRKGVFP 91 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~ 91 (349)
...+..+ .+|++++|+| ++ ++ ||+|+. +|.|+||++.... ...... .+|...|.+++|+| ++.
T Consensus 66 ~~~~~~h~~~v~~~~~~~--~~~~~-l~s~~~----dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~---- 132 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHP--THPTT-VAVGSK----GGDIILWDYDVQN--KTSFIQGMGPGDAITGMKFNQFNTN---- 132 (383)
T ss_dssp EEEECCCSSCEEEEEECS--SCTTE-EEEEEB----TSCEEEEETTSTT--CEEEECCCSTTCBEEEEEEETTEEE----
T ss_pred EEeccCCCCCEEEEEECC--CCCCE-EEEEcC----CCeEEEEeCCCcc--cceeeecCCcCCceeEEEeCCCCCC----
Confidence 3444444 7999999999 88 75 999998 9999999987432 222222 36999999999999 555
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
+|++++ | .|++||+.... ...+..+ ..+...|.+++|+| ++.+|++|+.||.|++||++ ++..
T Consensus 133 -~l~s~~~d~~i~iwd~~~~~---~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~------- 197 (383)
T 3ei3_B 133 -QLFVSSIRGATTLRDFSGSV---IQVFAKT--DSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEI------- 197 (383)
T ss_dssp -EEEEEETTTEEEEEETTSCE---EEEEECC--CCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEE-------
T ss_pred -EEEEEeCCCEEEEEECCCCc---eEEEecc--CCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEE-------
Confidence 777777 6 99999998632 1222222 23347899999998 89999999999999999994 4444
Q ss_pred CceeeeeeccCCceeeEEEecCCCCcc-EEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRD-MFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
..+.+|...|.+++|+|++ + ++++++.|+.|++||+++.+.. .......+...|.+++|+|.++.+|++++
T Consensus 198 ----~~~~~h~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 198 ----FKEKLHKAKVTHAEFNPRC---DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp ----EEEECSSSCEEEEEECSSC---TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred ----EEeccCCCcEEEEEECCCC---CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence 5678899999999999998 6 9999999999999999974311 11222247789999999997789999999
Q ss_pred eCCcEEEEEeccCCCcceeEeecCC-----------------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688 248 MNACEVIILDVRVPCTPVARLNNHR-----------------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE 310 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 310 (349)
.|+ .|++||+++ ......+..|. +.+..+.|+|++++ +++.|+.|++||+.+ .
T Consensus 271 ~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~-----~ 340 (383)
T 3ei3_B 271 QRN-EIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANS-----G 340 (383)
T ss_dssp SSS-EEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTT-----C
T ss_pred CCC-cEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCC-----C
Confidence 999 699999997 55556655442 23444666666654 778999999999987 4
Q ss_pred CcEEEEec--cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 311 DPILAYTA--AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 311 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+++..+.. |...+..++|+|++++|++++ |+.|++|++
T Consensus 341 ~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 341 GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEec
Confidence 45677776 456778889999999777775 999999986
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.7e-40 Score=277.71 Aligned_cols=249 Identities=15% Similarity=0.247 Sum_probs=208.4
Q ss_pred eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCc
Q psy17688 15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPD 92 (349)
Q Consensus 15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 92 (349)
.+..+..+ ..|.+++|+| ++++ ||+|+. ++.|++|++....+.... ....+|...|.++.|++++.
T Consensus 89 ~~~~~~~~~~~v~~~~~s~--~~~~-l~s~~~----d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----- 156 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAP--SGNY-VACGGL----DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ----- 156 (340)
T ss_dssp EEEEEECSSSCEEEEEECT--TSSE-EEEEET----TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-----
T ss_pred cceEeecCCccEEEEEECC--CCCE-EEEEeC----CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-----
Confidence 34444444 6799999999 9996 999998 999999998755433322 23447999999999999885
Q ss_pred EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
+++++.| .|++||+.+++. ...+.+| ...|.+++|+| ++.+|++|+.||.|++||+++++..
T Consensus 157 l~s~s~d~~i~~wd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~--------- 219 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQ--TTTFTGH-----TGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCR--------- 219 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEE---------
T ss_pred EEEEECCCcEEEEECCCCcE--EEEEcCC-----CCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeE---------
Confidence 5555557 999999987642 2333443 47899999998 8999999999999999999988776
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
..+.+|...|.+++|+|++ ++|++++.|+.|++||++..+.............|.+++|+| ++.+|++|+.|+
T Consensus 220 --~~~~~h~~~v~~v~~~p~~---~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~- 292 (340)
T 1got_B 220 --QTFTGHESDINAICFFPNG---NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDF- 292 (340)
T ss_dssp --EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTS-
T ss_pred --EEEcCCcCCEEEEEEcCCC---CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCC-
Confidence 6788999999999999999 899999999999999999876544443333445799999999 999999999999
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd 301 (349)
.|++||+.+ ...+..+.+|...|.+++|+|++.+ |++|+.|+.|++||
T Consensus 293 ~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~s~D~~i~iWd 340 (340)
T 1got_B 293 NCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMA-VATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEEC
T ss_pred eEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCE-EEEEcCCccEEecC
Confidence 699999987 7888899999999999999999999 99999999999997
No 36
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.8e-40 Score=283.68 Aligned_cols=300 Identities=13% Similarity=0.172 Sum_probs=234.4
Q ss_pred eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEecCCCCeeEEEEecC----C-
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTIDHPYPTTKIMWIPD----R- 86 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~----~- 86 (349)
...+..+ .+|++++|+| ++ ||+|+. +|.|+||+++..... ........|...|.+++|+|+ +
T Consensus 9 ~~~~~~h~~~i~~~~~~~----~~-l~s~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN----SF-TVSCSG----DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp EEESSCSSSCEEEEEECS----SE-EEEEET----TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhhhhhcCeEEEEecC----Ce-EEEEcC----CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence 3344444 7999999996 44 999988 999999998754310 122334579999999999999 7
Q ss_pred --CCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcCceeEEEec----CCCCCe-EEEEEcCCeEEEE
Q psy17688 87 --KGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCAPLTSFDWN----EVDPNL-LGTSSIDTTCTIW 154 (349)
Q Consensus 87 --~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~----~~~~~~-l~~~~~dg~i~iw 154 (349)
. +|++++ | .|++|++.+.+... ...+..+........|.+++|+ | ++.. |++++.||.|++|
T Consensus 80 ~~~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iw 153 (397)
T 1sq9_A 80 ELC-----LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIW 153 (397)
T ss_dssp EEE-----EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEE
T ss_pred ccc-----EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEE
Confidence 7 788777 5 99999998765311 1222222100003789999999 8 8888 9999999999999
Q ss_pred eccC------cceeeeecccCCceeeee-------eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688 155 CLET------NQVVGRVNSVSGHVKTQL-------IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII 221 (349)
Q Consensus 155 d~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 221 (349)
|+.+ ++.+. ......+ ..|...|.+++|+|++ ++++++.|+.|++||+++++....+
T Consensus 154 d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 154 KFHPFADESNSLTLN------WSPTLELQGTVESPMTPSQFATSVDISERG----LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp EEESSSSHHHHTTTC------CCCEEEEEEEECCSSSSCCCCCEEEECTTS----EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred eCCccccccccceee------ccCcceeeeeeccccCCCCCceEEEECCCc----eEEEEeCCCcEEEEECCCCceeEEE
Confidence 9998 55441 0001144 4488899999999975 8999999999999999987655444
Q ss_pred ee-CCC---CCceeEEEEeCCCCCeEEEEeeC---CcEEEEEeccCCCcceeEeec-------------CCcceEEEEEe
Q psy17688 222 YE-DPQ---HTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDVRVPCTPVARLNN-------------HRACVNGIAWA 281 (349)
Q Consensus 222 ~~-~~~---~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~~ 281 (349)
.. ..+ ...+.+++|+| ++.+|++++.| + .|++||+++ .+++..+.. |...|.+++|+
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g-~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFG-CITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp ECCC---CCCCCEEEEEECS-STTEEEEEEEETTEE-EEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred eccccccccCCccceEEECC-CCCEEEEEecCCCCc-eEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEEC
Confidence 32 115 78999999999 89999999999 8 699999997 788888888 99999999999
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe------cc---------------CCceEEEEEcCCC--------
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT------AA---------------GGEINQIQWGATQ-------- 332 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~-------- 332 (349)
|++++ |++++.||.|++||++. .+++..+. .| ...|.+++|+|++
T Consensus 301 ~~~~~-l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~ 374 (397)
T 1sq9_A 301 DSGET-LCSAGWDGKLRFWDVKT-----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGAD 374 (397)
T ss_dssp SSSSE-EEEEETTSEEEEEETTT-----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCT
T ss_pred CCCCE-EEEEeCCCeEEEEEcCC-----CceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccc
Confidence 99998 99999999999999987 34577787 77 8999999999998
Q ss_pred --CceEEEEcCCeEEEeeC
Q psy17688 333 --PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 333 --~~l~~~~~d~~v~vw~v 349 (349)
+.|++++.|+.|++|++
T Consensus 375 ~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 375 LNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp TSCEEEEEETTTEEEEEEE
T ss_pred ccceEEEecCCCcEEEEEc
Confidence 68899999999999985
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-39 Score=278.35 Aligned_cols=305 Identities=14% Similarity=0.207 Sum_probs=234.2
Q ss_pred ccceeeeee--cCCceeeEEEeec-CCCceEEEEEeeecccCCeEEEEeccccccccccceEe---cCCCCeeEEEEecC
Q psy17688 12 TQKEIYKYE--APWPLYSMNWSVR-PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI---DHPYPTTKIMWIPD 85 (349)
Q Consensus 12 ~~~~~~~~~--~~~~v~~~~~sp~-~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~ 85 (349)
.++....+. +..+|++++|+|. .++...+++++. ++.|++|++..... ....... .|...|++++|+|+
T Consensus 6 ~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~----~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~ 80 (366)
T 3k26_A 6 SFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVG----SNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYD 80 (366)
T ss_dssp CCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEE----TTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEEC
T ss_pred EEEEEEEeecCCCCceEEEEEecccCCCCceEEEECC----CCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccC
Confidence 344433444 3479999999983 123323666666 78999999874322 1111111 26688999999999
Q ss_pred CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688 86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG 163 (349)
Q Consensus 86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 163 (349)
+... ..+|++++ | .|++||+.+.+. ...+..| ...|.+++|+|.++.+|++|+.||.|++||+++++..
T Consensus 81 ~~~~-~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~- 151 (366)
T 3k26_A 81 SNTS-HPLLAVAGSRGIIRIINPITMQC--IKHYVGH-----GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV- 151 (366)
T ss_dssp TTTC-CEEEEEEETTCEEEEECTTTCCE--EEEEESC-----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE-
T ss_pred CCCC-CCEEEEecCCCEEEEEEchhceE--eeeecCC-----CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE-
Confidence 4310 01777776 5 999999987653 2233333 3799999999868899999999999999999988876
Q ss_pred eecccCCceeeee---eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-------------------
Q psy17688 164 RVNSVSGHVKTQL---IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII------------------- 221 (349)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~------------------- 221 (349)
..+ ..|...|.+++|+|++ ++|++++.||.|++||+++++....+
T Consensus 152 ----------~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 152 ----------AIFGGVEGHRDEVLSADYDLLG---EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp ----------EEECSTTSCSSCEEEEEECTTS---SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred ----------EEecccccccCceeEEEECCCC---CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 344 6799999999999998 89999999999999999976432111
Q ss_pred -------eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-------------cceeEeecCCcceEEEEEe
Q psy17688 222 -------YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-------------TPVARLNNHRACVNGIAWA 281 (349)
Q Consensus 222 -------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-------------~~~~~~~~~~~~v~~~~~~ 281 (349)
....+...|.+++|+ +.++++++.|+ .|++||++... ..+..+..|...|++++|+
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCEN-AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSS-EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred eccCccccccCCcceEEEEEEc---CCEEEEEecCC-EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 111267889999998 56999999999 69999998622 2367778899999999999
Q ss_pred eC--CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 282 PH--SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA--GGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 282 p~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|+ +.+ |++++.||.|++||++..... ......+..| ...|++++|+|++++|++++.|+.|++|++
T Consensus 295 ~~~~~~~-l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 295 MDFWQKM-LALGNQVGKLYVWDLEVEDPH-KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp ECTTSSE-EEEECTTSCEEEEECCSSSGG-GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCCcE-EEEEecCCcEEEEECCCCCCc-cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 99 888 999999999999999885431 1244567777 789999999999999999999999999986
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-41 Score=288.81 Aligned_cols=293 Identities=13% Similarity=0.177 Sum_probs=215.7
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D- 99 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~- 99 (349)
..+|++++|+| ++++ ||+|+. ++.|+||++.....+.. ....+|...|.+++|+|+++ +|++++ |
T Consensus 11 ~~~v~~~~~s~--~g~~-l~~~~~----d~~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~-----~l~s~s~d~ 77 (377)
T 3dwl_C 11 PKPSYEHAFNS--QRTE-FVTTTA----TNQVELYEQDGNGWKHA-RTFSDHDKIVTCVDWAPKSN-----RIVTCSQDR 77 (377)
T ss_dssp SSCCSCCEECS--SSSE-EECCCS----SSCBCEEEEETTEEEEC-CCBCCCSSCEEEEEECTTTC-----CEEEEETTS
T ss_pred CCcEEEEEECC--CCCE-EEEecC----CCEEEEEEccCCceEEE-EEEecCCceEEEEEEeCCCC-----EEEEEeCCC
Confidence 46899999999 9996 999988 99999999874311222 22347999999999999998 778777 6
Q ss_pred cEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 YLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 ~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++||+.+.. ......+.. |...|.+++|+| ++++|++|+.|+.|++||+++++.. .....+..
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~ 143 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLR-----LNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDW--------WVSKHLKR 143 (377)
T ss_dssp SEEEC------CCCCEEECCC-----CSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----C--------CCCEEECS
T ss_pred eEEEEEcCCCCceeeeeEecc-----cCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccc--------eeeeEeec
Confidence 99999998764 112222333 347899999998 8999999999999999999987641 11145666
Q ss_pred -cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC---------------ceeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688 179 -HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE---------------HSTIIYEDPQHTPLLRLAWNKQDPNY 242 (349)
Q Consensus 179 -~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~ 242 (349)
|...|.+++|+|++ ++|++++.|+.|++||++..+ .........+...|.+++|+| ++.+
T Consensus 144 ~h~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~ 219 (377)
T 3dwl_C 144 PLRSTILSLDWHPNN---VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNA 219 (377)
T ss_dssp SCCSCEEEEEECTTS---SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSC
T ss_pred ccCCCeEEEEEcCCC---CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCE
Confidence 99999999999998 899999999999999996322 111222226778899999999 9999
Q ss_pred EEEEeeCCcEEEEEeccCCCcc----eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC----CCC----
Q psy17688 243 LAMVAMNACEVIILDVRVPCTP----VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR----AIE---- 310 (349)
Q Consensus 243 l~~~~~d~~~i~v~d~~~~~~~----~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~----~~~---- 310 (349)
|++++.|+ .|++||++. +.. +..+..|...|.+++|+|++++ |++++.++.+ +|+...... ...
T Consensus 220 l~~~~~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (377)
T 3dwl_C 220 LAYAGHDS-SVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAI-VAAGYNYSPI-LLQGNESGWAHTRDLDAGTS 295 (377)
T ss_dssp EEEEETTT-EEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEE-EEEESSSSEE-EECCCC---CCSBCCCSCCC
T ss_pred EEEEeCCC-cEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCE-EEEEcCCcEE-EEEeCCCceEEEeeeccccc
Confidence 99999999 699999997 555 7788999999999999999997 8888766655 776652110 000
Q ss_pred -----------------CcE------EEE----------------eccCCceEEEEEcCCCCc----eEEEEcCCeEEEe
Q psy17688 311 -----------------DPI------LAY----------------TAAGGEINQIQWGATQPD----WIAICYNKYLEVL 347 (349)
Q Consensus 311 -----------------~~~------~~~----------------~~~~~~v~~~~~~~~~~~----l~~~~~d~~v~vw 347 (349)
... ..+ ..|...|+++++.+.... +++++.||.|++|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iW 375 (377)
T 3dwl_C 296 KTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLW 375 (377)
T ss_dssp CCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred ccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEe
Confidence 000 111 128899999998775543 8999999999999
Q ss_pred eC
Q psy17688 348 RV 349 (349)
Q Consensus 348 ~v 349 (349)
+|
T Consensus 376 dl 377 (377)
T 3dwl_C 376 TL 377 (377)
T ss_dssp CC
T ss_pred cC
Confidence 86
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-40 Score=291.00 Aligned_cols=285 Identities=13% Similarity=0.150 Sum_probs=215.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC-CCCCCCcEEEEeC-C-
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD-RKGVFPDLLATSG-D- 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~-~- 99 (349)
..|++++|+|. ++++ ||+|+. ||.|+||++........ ....+|.+.|++|+|+|. +. +|++++ |
T Consensus 120 ~~V~~l~~~P~-~~~~-lasGs~----dg~i~lWd~~~~~~~~~-~~~~gH~~~V~~l~f~p~~~~-----~l~s~s~D~ 187 (435)
T 4e54_B 120 RRATSLAWHPT-HPST-VAVGSK----GGDIMLWNFGIKDKPTF-IKGIGAGGSITGLKFNPLNTN-----QFYASSMEG 187 (435)
T ss_dssp SCEEEEEECSS-CTTC-EEEEET----TSCEEEECSSCCSCCEE-ECCCSSSCCCCEEEECSSCTT-----EEEEECSSS
T ss_pred CCEEEEEEeCC-CCCE-EEEEeC----CCEEEEEECCCCCceeE-EEccCCCCCEEEEEEeCCCCC-----EEEEEeCCC
Confidence 67999999982 3454 999998 99999999875433222 223479999999999984 55 888887 6
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
+|++||++.... ......+ .+...+.+++|+| ++.+|++|+.||.|++||++... + ..+.+|
T Consensus 188 ~v~iwd~~~~~~--~~~~~~~---~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~-~-----------~~~~~h 249 (435)
T 4e54_B 188 TTRLQDFKGNIL--RVFASSD---TINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKE-L-----------WNLRMH 249 (435)
T ss_dssp CEEEEETTSCEE--EEEECCS---SCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCB-C-----------CCSBCC
T ss_pred EEEEeeccCCce--eEEeccC---CCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcce-e-----------EEEecc
Confidence 999999976532 1222221 2235678899998 99999999999999999987543 3 467889
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
...|.+++|+|++. .++++++.|+.|++||+++.+.... .....|...|.+++|+| ++.+|++++.|+ .|++||+
T Consensus 250 ~~~v~~v~~~p~~~--~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~-~i~iwd~ 325 (435)
T 4e54_B 250 KKKVTHVALNPCCD--WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKS-EIRVYSA 325 (435)
T ss_dssp SSCEEEEEECTTCS--SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSS-CEEEEES
T ss_pred cceEEeeeecCCCc--eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCC-EEEEEEC
Confidence 99999999999874 6899999999999999998764432 22345778999999999 999999999999 5999999
Q ss_pred cCCCcceeEeecCCc------ceEEEEEeeCCCCEEEEEc------------CCCcEEEEEeecCCCCCCCcEEEE-ecc
Q psy17688 259 RVPCTPVARLNNHRA------CVNGIAWAPHSSCHICTAG------------DDHQALIWDIQQMPRAIEDPILAY-TAA 319 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~------~v~~~~~~p~~~~~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~-~~~ 319 (349)
+. +.....+..|.. .+....|+|++.. +++++ .++.|++||..++ ..+..+ .+|
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-----~~~~~l~~~~ 398 (435)
T 4e54_B 326 SQ-WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSG-----KMMCQLYDPE 398 (435)
T ss_dssp SS-SSSEEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSC-----CEEEEECCSS
T ss_pred CC-CccceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCC-----cEEEEEeCCC
Confidence 87 555555554432 2334567777666 44443 3467999999873 334444 467
Q ss_pred CCceEEE-EEcCCCCceEEEEcCCeEEEeeC
Q psy17688 320 GGEINQI-QWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 320 ~~~v~~~-~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...|.++ +|+|+|.+|+ ++.|+.|+||++
T Consensus 399 ~~~v~s~~~fspdg~~la-sg~d~~i~iW~~ 428 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLA-SAMGYHILIWSQ 428 (435)
T ss_dssp CCCCCCEEEECTTSSCEE-EECSSEEEECCC
T ss_pred CCcEEEEEEECCCCCEEE-EEcCCcEEEEEC
Confidence 8888887 6999998655 456899999985
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-39 Score=266.82 Aligned_cols=282 Identities=14% Similarity=0.177 Sum_probs=231.9
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
.+.+..+..+ .+|++++| | ++++ ||+|+. +|.|++|++.. ++.. .....|...|.+++|+|+++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~--~~~~-l~s~~~----dg~v~vw~~~~--~~~~-~~~~~~~~~v~~~~~~~~~~---- 72 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-V--DDSK-VASVSR----DGTVRLWSKDD--QWLG-TVVYTGQGFLNSVCYDSEKE---- 72 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-E--ETTE-EEEEET----TSEEEEEEESS--SEEE-EEEEECSSCEEEEEEETTTT----
T ss_pred HHHHHHhhCCCCCcEEEEe-c--CCCE-EEEEEc----CCcEEEEECCC--CEEE-EEeecCCccEEEEEECCCCC----
Confidence 3556667666 79999999 7 8885 999988 99999999853 3322 33457899999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCch-hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETR-LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (349)
+|++++ + .|++|++...... ....+. .|...|.+++| +++.+++++.||.|++|| .++..
T Consensus 73 -~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~------ 135 (313)
T 3odt_A 73 -LLLFGGKDTMINGVPLFATSGEDPLYTLI-----GHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLV------ 135 (313)
T ss_dssp -EEEEEETTSCEEEEETTCCTTSCC-CEEC-----CCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEE------
T ss_pred -EEEEecCCCeEEEEEeeecCCCCcccchh-----hcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEE------
Confidence 888777 5 9999999765321 122223 34478999998 457999999999999999 44443
Q ss_pred CCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 169 SGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
..+..|...+.+++|.| ++ +.+++++.|+.|++||... . .......+...+.+++|+| ++. +++++
T Consensus 136 -----~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~--~-~~~~~~~~~~~i~~~~~~~-~~~-~~~~~ 202 (313)
T 3odt_A 136 -----YNLQAHNASVWDAKVVSFSE---NKFLTASADKTIKLWQNDK--V-IKTFSGIHNDVVRHLAVVD-DGH-FISCS 202 (313)
T ss_dssp -----EEEECCSSCEEEEEEEETTT---TEEEEEETTSCEEEEETTE--E-EEEECSSCSSCEEEEEEEE-TTE-EEEEE
T ss_pred -----EecccCCCceeEEEEccCCC---CEEEEEECCCCEEEEecCc--e-EEEEeccCcccEEEEEEcC-CCe-EEEcc
Confidence 56788999999999999 66 8999999999999999442 2 2233334778999999999 666 99999
Q ss_pred eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ 327 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 327 (349)
.|+ .|++||+++ ++++..+..|...|++++|+|++ . |++++.||.|++||+++ .+++..+..|...|.+++
T Consensus 203 ~dg-~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~i~~~~ 273 (313)
T 3odt_A 203 NDG-LIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKEN-----GSLKQVITLPAISIWSVD 273 (313)
T ss_dssp TTS-EEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTT-----CCEEEEEECSSSCEEEEE
T ss_pred CCC-eEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCC-----CceeEEEeccCceEEEEE
Confidence 999 699999997 88899999999999999999999 5 88999999999999988 456788888999999999
Q ss_pred EcCCCCceEEEEcCCeEEEeeC
Q psy17688 328 WGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 328 ~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|+|+++ +++++.|+.|++|++
T Consensus 274 ~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 274 CMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp ECTTSC-EEEEETTSCEEEEES
T ss_pred EccCCC-EEEEeCCCcEEEEeC
Confidence 999997 888999999999985
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.4e-39 Score=291.66 Aligned_cols=280 Identities=16% Similarity=0.305 Sum_probs=235.2
Q ss_pred eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
+..+..+ .+|.+++|+| ++++ |++++. ++.|++|+.+ ++... ...+|...|.+++|+|+++ ++
T Consensus 255 ~~~~~~~~~~v~~v~~~~--d~~~-l~~~~~----d~~i~~w~~~---~~~~~-~~~~h~~~v~~~~~~~~~~-----~l 318 (577)
T 2ymu_A 255 LQTLTGHSSSVNGVAFRP--DGQT-IASASD----DKTVKLWNRN---GQLLQ-TLTGHSSSVWGVAFSPDGQ-----TI 318 (577)
T ss_dssp EEEECCCSSCEEEEEECT--TSSE-EEEEET----TSCEEEEETT---SCEEE-EECCCSSCEEEEEECTTSS-----EE
T ss_pred EEEEecCCCCEEEEEEcC--CCCE-EEEEeC----CCEEEEEeCC---CcEEE-EEecCCCCeEEEEECCCCC-----EE
Confidence 3344444 7899999998 9995 999988 9999999864 33332 2457999999999999998 88
Q ss_pred EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++++ | .|++|+..... ...+.. +...+.+++|+| +++.|++|+.||.|++||.. ++.+
T Consensus 319 ~t~~~d~~i~~w~~~~~~---~~~~~~-----~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~-~~~~---------- 378 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNGQH---LQTLTG-----HSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN-GQLL---------- 378 (577)
T ss_dssp EEEETTSCEEEEETTSCE---EEEECC-----CSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-CCEE----------
T ss_pred EEEeCCCeEEEEeCCCCe---eEEEeC-----CCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCC-CCEE----------
Confidence 8877 5 99999987643 122333 347899999998 99999999999999999964 4444
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 252 (349)
..+.+|...|.+++|+|++ ++|++++.|+.|++||... +....+ ..+...|.+++|+| ++.+|++++.|+ .
T Consensus 379 -~~~~~~~~~v~~~~~s~dg---~~l~~~~~d~~v~~~~~~~-~~~~~~--~~~~~~v~~~~~s~-d~~~l~~~~~d~-~ 449 (577)
T 2ymu_A 379 -QTLTGHSSSVRGVAFSPDG---QTIASASDDKTVKLWNRNG-QLLQTL--TGHSSSVWGVAFSP-DDQTIASASDDK-T 449 (577)
T ss_dssp -EEEECCSSCEEEEEECTTS---SCEEEEETTSEEEEECTTC-CEEEEE--ECCSSCEEEEEECT-TSSEEEEEETTS-E
T ss_pred -EEecCCCCCeEEEEECCCC---CEEEEEeCCCEEEEEeCCC-CEEEEe--cCCCCCeEEEEECC-CCCEEEEEcCCC-E
Confidence 5678899999999999999 8999999999999999653 333333 35778999999999 999999999999 6
Q ss_pred EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ 332 (349)
Q Consensus 253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 332 (349)
|++||.. ++.+..+.+|...|++++|+|++++ |++++.|+.|++||.. .+.+..+.+|...|++++|+|++
T Consensus 450 v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~-las~~~d~~i~iw~~~------~~~~~~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 450 VKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN------GQLLQTLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp EEEEETT--SCEEEEEECCSSCEEEEEECTTSCE-EEEEETTSEEEEEETT------SCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCEEEEEcCC------CCEEEEEeCCCCCEEEEEEcCCC
Confidence 9999974 6788889999999999999999998 9999999999999953 24577899999999999999999
Q ss_pred CceEEEEcCCeEEEeeC
Q psy17688 333 PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 333 ~~l~~~~~d~~v~vw~v 349 (349)
++|++++.|+.|++|++
T Consensus 521 ~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR 537 (577)
T ss_dssp SCEEEEETTSEEEEECT
T ss_pred CEEEEEECcCEEEEEeC
Confidence 99999999999999974
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.3e-39 Score=298.58 Aligned_cols=290 Identities=14% Similarity=0.206 Sum_probs=226.9
Q ss_pred eeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 18 KYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 18 ~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
.++.| ..|++++|+| ++ ++ |++|+. |+.|+||++....... ......+|...|.+++|+|+++ +
T Consensus 377 ~l~~H~~~V~~v~~~~--~~~~~-l~s~s~----D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-----~ 444 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPI--DNADI-IVSASR----DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-----F 444 (694)
T ss_dssp EEECCSSCEEEEECCT--TCCSE-EEEEET----TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-----E
T ss_pred hcccCCceeEEEEecC--CCCCE-EEEEeC----CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-----E
Confidence 34445 7999999998 54 54 999998 9999999987543221 2233458999999999999998 8
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
|++|+ | .|+|||+.++.. ...+.+| ...|.+++|+| ++++|++|+.|++|++||+.......
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~--~~~~~~h-----~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~-------- 508 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVS--TRRFVGH-----TKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYT-------- 508 (694)
T ss_dssp EEEEETTSEEEEEETTTTEE--EEEEECC-----SSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE--------
T ss_pred EEEEeCCCcEEEEECCCCcc--eeEEeCC-----CCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCccee--------
Confidence 88888 6 999999987642 2233444 47899999998 99999999999999999986544321
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
......+|...|.+++|+|++. ...+++++.|+.|++||+++.+....+ ..|...|.+++|+| ++.+|++|+.|+
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~sp-dg~~l~sg~~Dg- 583 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTL-QPTIVSASWDKTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSP-DGSLCASGGKDG- 583 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSS-SCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS-
T ss_pred eccCCCCCCCcEEEEEEeCCCC-cceEEEEeCCCeEEEEECCCCcEEEEE--cCCCCCEEEEEEeC-CCCEEEEEeCCC-
Confidence 0012256888999999999752 148999999999999999987654443 35788999999999 999999999999
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA------------- 318 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~------------- 318 (349)
.|++||+++ ++.+..+.. ...|.+++|+|++.+ |++++ ++.|++||+++.. .+..+..
T Consensus 584 ~i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~~-l~~~~-~~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~ 654 (694)
T 3dm0_A 584 VVLLWDLAE-GKKLYSLEA-NSVIHALCFSPNRYW-LCAAT-EHGIKIWDLESKS-----IVEDLKVDLKAEAEKADNSG 654 (694)
T ss_dssp BCEEEETTT-TEEEECCBC-SSCEEEEEECSSSSE-EEEEE-TTEEEEEETTTTE-----EEEEECCCCC----------
T ss_pred eEEEEECCC-CceEEEecC-CCcEEEEEEcCCCcE-EEEEc-CCCEEEEECCCCC-----Chhhhccccccccccccccc
Confidence 599999997 777776654 567999999999875 66554 6679999998732 2222221
Q ss_pred ------cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 319 ------AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 319 ------~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+...+++++|+|++++|++++.||.|++|++
T Consensus 655 ~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 655 PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp ------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 1224789999999999999999999999986
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=273.01 Aligned_cols=253 Identities=20% Similarity=0.359 Sum_probs=205.4
Q ss_pred ecCCC-CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 71 IDHPY-PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 71 ~~~~~-~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
.+|.. .|.+++|+|+++ +||+|+ | .|+||++..+.......+ ..+|...|.+++|+| ++++|++|+.
T Consensus 12 ~~h~~~~v~~l~~sp~g~-----~las~~~D~~i~iw~~~~~~~~~~~~~----~~~h~~~v~~~~~sp-~g~~l~s~s~ 81 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGT-----LLASCGGDRRIRIWGTEGDSWICKSVL----SEGHQRTVRKVAWSP-CGNYLASASF 81 (345)
T ss_dssp CCSTTSCEEEEEECTTSS-----CEEEEETTSCEEEEEEETTEEEEEEEE----CSSCSSCEEEEEECT-TSSEEEEEET
T ss_pred cCCCCCcEEEEEECCCCC-----EEEEEcCCCeEEEEEcCCCcceeeeee----ccccCCcEEEEEECC-CCCEEEEEEC
Confidence 36777 899999999998 888887 6 999999987642211111 123458999999998 9999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee-eeeeCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST-IIYEDPQ 226 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~ 226 (349)
|+.|++||+.++... ....+.+|...|.+++|+|++ ++|++++.|+.|++||++...... ......+
T Consensus 82 D~~v~iw~~~~~~~~---------~~~~~~~h~~~v~~v~~sp~~---~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 82 DATTCIWKKNQDDFE---------CVTTLEGHENEVKSVAWAPSG---NLLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp TSCEEEEEECCC-EE---------EEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred CCcEEEEEccCCCeE---------EEEEccCCCCCceEEEEeCCC---CEEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 999999998876432 125678999999999999999 899999999999999998765432 2223457
Q ss_pred CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
...|.+++|+| ++.+|++++.|+ .|++||.+... .+...+.+|...|++++|+|++++ |++++.|+.|++||....
T Consensus 150 ~~~v~~~~~~p-~~~~l~s~s~d~-~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~-l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 150 TQDVKHVVWHP-SQELLASASYDD-TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp CSCEEEEEECS-SSSCEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEEECT
T ss_pred CCCeEEEEECC-CCCEEEEEeCCC-cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE-EEEEeCCCeEEEeccccC
Confidence 78999999999 999999999999 59999998622 345778899999999999999998 999999999999998653
Q ss_pred CCCCC----------CcEEEEec-cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 306 PRAIE----------DPILAYTA-AGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 306 ~~~~~----------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
..... ..+..+.+ |...|.+++|+|++..|++++.|+.|++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 227 GNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp TCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred CCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 32111 12233444 788999999999999999999999999996
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.3e-39 Score=270.79 Aligned_cols=285 Identities=13% Similarity=0.160 Sum_probs=231.3
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD- 99 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~- 99 (349)
...+|.+++|+| ||++ ++++.. ++.+.+|.... ........+|...|.+++|+|+++ +++++++
T Consensus 8 ~~~~v~~~~~s~--dg~~-~~~~~~----~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~-----~l~~~~dg 72 (337)
T 1gxr_A 8 GSKPAYSFHVTA--DGQM-QPVPFP----PDALIGPGIPR---HARQINTLNHGEVVCAVTISNPTR-----HVYTGGKG 72 (337)
T ss_dssp EEEECCEEEECS--SSCE-EECCCC----TTSSSSTTCCS---EEEEEEEECCSSCCCEEEECSSSS-----EEEEECBS
T ss_pred cCCceeEEEECC--CCCE-EEeecC----CCcEeccccCC---ccccceeccCCCceEEEEEecCCc-----EEEEcCCC
Confidence 346899999999 9996 887766 56555553322 222233458999999999999998 8888887
Q ss_pred cEEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 YLRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++|++.+.+.... ..+. ...+...|.+++|+| ++++|++++.||.|++||+.+++... ...+..
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~---------~~~~~~ 139 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLD---CLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRI---------KAELTS 139 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEE---CSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EE---------EEEEEC
T ss_pred eEEEEECCCCCceeeeeccc---ccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcce---------eeeccc
Confidence 999999987542211 1111 113447899999998 89999999999999999999876321 146778
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
|...|.+++|+|++ +++++++.|+.|++||+++++....+ ..+...+.+++|+| ++.+|++++.|+ .|++||+
T Consensus 140 ~~~~i~~~~~~~~~---~~l~~~~~dg~v~~~d~~~~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~dg-~i~~~d~ 212 (337)
T 1gxr_A 140 SAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISN-DGTKLWTGGLDN-TVRSWDL 212 (337)
T ss_dssp SSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS-EEEEEET
T ss_pred CCCceEEEEECCCC---CEEEEEeCCCcEEEEeCCCCceeeee--ecccCceEEEEECC-CCCEEEEEecCC-cEEEEEC
Confidence 99999999999998 89999999999999999987654443 34778999999999 999999999999 6999999
Q ss_pred cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688 259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI 338 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 338 (349)
+. ++.+..+. +...+.+++|+|++++ |++++.|+.|++||++... ...+..|...|.+++|+|++++++++
T Consensus 213 ~~-~~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~~~~~i~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 213 RE-GRQLQQHD-FTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNKPD------KYQLHLHESCVLSLKFAYCGKWFVST 283 (337)
T ss_dssp TT-TEEEEEEE-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTSSC------EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CC-CceEeeec-CCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCCC------eEEEcCCccceeEEEECCCCCEEEEe
Confidence 97 66666654 6788999999999998 9999999999999998732 35677889999999999999999999
Q ss_pred EcCCeEEEeeC
Q psy17688 339 CYNKYLEVLRV 349 (349)
Q Consensus 339 ~~d~~v~vw~v 349 (349)
+.|+.|++|++
T Consensus 284 ~~dg~i~~~~~ 294 (337)
T 1gxr_A 284 GKDNLLNAWRT 294 (337)
T ss_dssp ETTSEEEEEET
T ss_pred cCCCcEEEEEC
Confidence 99999999985
No 45
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-40 Score=276.15 Aligned_cols=255 Identities=15% Similarity=0.208 Sum_probs=200.6
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSS 146 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 146 (349)
..+|.+.|++++|+|+++ +||+|+ | +|+|||+.++.......+.+|. .+|.+++|++. ++++|++|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~-----~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~~~~~~~~~l~s~s 78 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGT-----RLATCSSDRSVKIFDVRNGGQILIADLRGHE-----GPVWQVAWAHPMYGNILASCS 78 (316)
T ss_dssp -----CCEEEEEECGGGC-----EEEEEETTTEEEEEEEETTEEEEEEEEECCS-----SCEEEEEECCGGGSSCEEEEE
T ss_pred cccccCeEEEeeEcCCCC-----EEEEEeCCCeEEEEEecCCCcEEEEEEcCCC-----ccEEEEEeCCCCCCCEEEEEE
Confidence 347999999999999998 888888 6 9999999876432233444444 79999999753 478999999
Q ss_pred cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCcee-eeee
Q psy17688 147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHST-IIYE 223 (349)
Q Consensus 147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~ 223 (349)
.|++|++||+++++.. ....+.+|...|.+++|+|+ + .+|++++.|+.|++||++...... ....
T Consensus 79 ~D~~v~iWd~~~~~~~---------~~~~~~~h~~~V~~v~~~p~~~g---~~lasgs~D~~i~lwd~~~~~~~~~~~~~ 146 (316)
T 3bg1_A 79 YDRKVIIWREENGTWE---------KSHEHAGHDSSVNSVCWAPHDYG---LILACGSSDGAISLLTYTGEGQWEVKKIN 146 (316)
T ss_dssp TTSCEEEECCSSSCCC---------EEEEECCCSSCCCEEEECCTTTC---SCEEEECSSSCEEEEEECSSSCEEECCBT
T ss_pred CCCEEEEEECCCCcce---------EEEEccCCCCceEEEEECCCCCC---cEEEEEcCCCCEEEEecCCCCCcceeeee
Confidence 9999999999876421 11457789999999999998 5 799999999999999998753221 2222
Q ss_pred CCCCCceeEEEEeCCC----------------CCeEEEEeeCCcEEEEEeccCCC--cceeEeecCCcceEEEEEeeCC-
Q psy17688 224 DPQHTPLLRLAWNKQD----------------PNYLAMVAMNACEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHS- 284 (349)
Q Consensus 224 ~~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~p~~- 284 (349)
..|...+.+++|+|.. +.+|++|+.|+ .|++||++... .++..+.+|...|.+++|+|++
T Consensus 147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN-LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225 (316)
T ss_dssp TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS-BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred ccccCCcceEEEccccCCccccccccccCccccceEEEecCCC-eEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence 3567889999999931 47899999999 69999997522 4667788999999999999987
Q ss_pred ---CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 285 ---SCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 285 ---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.+ |++++.|++|++||++...... .....+..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 226 ~~~~~-las~s~D~~v~iw~~~~~~~~~-~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 226 LPTST-IASCSQDGRVFIWTCDDASSNT-WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CSCCE-EEEEETTCEEEEEECSSTTCCC-CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CCCce-EEEEcCCCeEEEEEccCccccc-hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 55 9999999999999997632111 112234567899999999999999999999999999973
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.9e-38 Score=273.06 Aligned_cols=279 Identities=16% Similarity=0.260 Sum_probs=226.7
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG-D- 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~- 99 (349)
+-+..|+||+ ++ .||+|. ++.|+||+.. +++...... .+|...|++|+|+|+++ +|++|+ |
T Consensus 106 ~y~~~l~wS~--~n--~lAvgl-----d~tV~lWd~~--tg~~~~~~~~~~~~~~V~sv~fspdg~-----~lasgs~Dg 169 (420)
T 4gga_A 106 YYLNLVDWSS--GN--VLAVAL-----DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSA 169 (420)
T ss_dssp TTCBCEEECT--TS--EEEEEE-----TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTS
T ss_pred ccceeEEECC--CC--EEEEEe-----CCEEEEEECC--CCCEEEEEEecCCCCcEEEEEECCCCC-----EEEEEECCC
Confidence 4567899996 44 388874 7999999875 455444333 36778899999999998 888888 5
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.|+|||+.+++. ...+.+| ...+.+++|+ +..|++|+.|+.+++||....... ...+.+|
T Consensus 170 ~v~iWd~~~~~~--~~~~~~h-----~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~----------~~~~~~h 229 (420)
T 4gga_A 170 EVQLWDVQQQKR--LRNMTSH-----SARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHH----------VATLSGH 229 (420)
T ss_dssp CEEEEETTTTEE--EEEECCC-----SSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCE----------EEEEECC
T ss_pred eEEEEEcCCCcE--EEEEeCC-----CCceEEEeeC---CCEEEEEeCCCceeEeeeccccee----------eEEeccc
Confidence 999999988642 2233333 4788888874 579999999999999998875543 2567899
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEE
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVII 255 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v 255 (349)
...+..+.|+|++ .++++++.|+.+++||.+.++.. .......+...|.+++|+|.+..++++++ .|+ .|++
T Consensus 230 ~~~~~~~~~~~~g---~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~-~I~i 305 (420)
T 4gga_A 230 SQEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRI 305 (420)
T ss_dssp SSCEEEEEECTTS---SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC-EEEE
T ss_pred ccceeeeeecCCC---CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC-EEEE
Confidence 9999999999999 89999999999999999876532 22333467789999999997778887654 688 6999
Q ss_pred EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE--cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688 256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA--GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP 333 (349)
Q Consensus 256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 333 (349)
||+++ +.+...+..| ..+.++.|+|++.. ++++ +.|+.|++||+.+ ..++..+.+|.+.|++++|+|+++
T Consensus 306 wd~~t-~~~~~~~~~~-~~v~~~~~~~~~~~-lv~~sg~~d~~I~iwd~~~-----~~~v~~l~gH~~~V~~l~~spdg~ 377 (420)
T 4gga_A 306 WNVCS-GACLSAVDAH-SQVCSILWSPHYKE-LISGHGFAQNQLVIWKYPT-----MAKVAELKGHTSRVLSLTMSPDGA 377 (420)
T ss_dssp EETTT-TEEEEEEECS-SCEEEEEEETTTTE-EEEEECTTTCCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSS
T ss_pred EeCCc-cccceeeccc-cceeeeeecCCCCe-EEEEEecCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCC
Confidence 99997 7777777754 57899999999998 5443 3799999999987 456889999999999999999999
Q ss_pred ceEEEEcCCeEEEeeC
Q psy17688 334 DWIAICYNKYLEVLRV 349 (349)
Q Consensus 334 ~l~~~~~d~~v~vw~v 349 (349)
+|++++.|++|+||++
T Consensus 378 ~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 378 TVASAAADETLRLWRC 393 (420)
T ss_dssp CEEEEETTTEEEEECC
T ss_pred EEEEEecCCeEEEEEC
Confidence 9999999999999986
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-39 Score=276.20 Aligned_cols=252 Identities=18% Similarity=0.287 Sum_probs=207.5
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCC-------------CCCcCceeEEEec
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKN-------------SDFCAPLTSFDWN 135 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~ 135 (349)
.++|...|.+++|+|+++ +||++++ .+++|++.+++.. ..+..+.. ..+...|.+++|+
T Consensus 60 ~~~h~~~V~~v~fspdg~-----~la~g~~~~v~i~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGE-----YLATGCNKTTQVYRVSDGSLV--ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp EEECSSCCCEEEECTTSS-----EEEEECBSCEEEEETTTCCEE--EEECC-----------------CCCCBEEEEEEC
T ss_pred ecCCCCEEEEEEECCCCC-----EEEEEcCCcEEEEEecCCCEE--EEecCccccccccccccccccCCCceeEEEEEEC
Confidence 447999999999999998 9999887 9999999876532 12222110 0122358999999
Q ss_pred CCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688 136 EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL 215 (349)
Q Consensus 136 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 215 (349)
| ++++|++|+.|+.|++||+.+++.. ..+.+|...|.+++|+|++ ++|++++.|+.|++||++++
T Consensus 133 ~-dg~~l~s~~~d~~i~iwd~~~~~~~-----------~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 133 P-DGKFLATGAEDRLIRIWDIENRKIV-----------MILQGHEQDIYSLDYFPSG---DKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTTEEE-----------EEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTT
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCcEE-----------EEEccCCCCEEEEEEcCCC---CEEEEecCCCcEEEEECCCC
Confidence 8 9999999999999999999988876 5788999999999999999 89999999999999999987
Q ss_pred CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-------ecCCcceEEEEEeeCCCCEE
Q psy17688 216 EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-------NNHRACVNGIAWAPHSSCHI 288 (349)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l 288 (349)
+....+ .+...+.+++|+|.++.+|++|+.|+ .|++||+++ +..+..+ .+|...|.+++|+|++++ |
T Consensus 198 ~~~~~~---~~~~~v~~~~~~~~~~~~l~~~s~d~-~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-l 271 (393)
T 1erj_A 198 QCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDR-AVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQS-V 271 (393)
T ss_dssp EEEEEE---ECSSCEEEEEECSTTCCEEEEEETTS-CEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSE-E
T ss_pred eeEEEE---EcCCCcEEEEEECCCCCEEEEEcCCC-cEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCE-E
Confidence 654444 24578999999998899999999999 599999987 6656555 578999999999999998 9
Q ss_pred EEEcCCCcEEEEEeecCCCC-------CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 289 CTAGDDHQALIWDIQQMPRA-------IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 289 ~~~~~d~~v~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
++++.|+.|++||++..... .......+.+|...|.+++|+|++.+|++++.|+.|++|++
T Consensus 272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999999864321 12345678889999999999999999999999999999985
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-39 Score=283.17 Aligned_cols=280 Identities=13% Similarity=0.130 Sum_probs=221.1
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL 101 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i 101 (349)
.+++++|+| ++++ |++|+. +|.|++|++... +.... ...+ ..+....|+|+++ +|++++ + .|
T Consensus 58 ~~~~~~~s~--~g~~-l~~~~~----d~~v~i~d~~~~--~~~~~-~~~~-~~~~~~~~~~~~~-----~l~~~~~dg~i 121 (420)
T 3vl1_A 58 AGKGNTFEK--VGSH-LYKARL----DGHDFLFNTIIR--DGSKM-LKRA-DYTAVDTAKLQMR-----RFILGTTEGDI 121 (420)
T ss_dssp CCTTCEEEE--EETT-EEEEEE----TTEEEEEECCSE--ETTTT-SCSC-CEEEEEEECSSSC-----EEEEEETTSCE
T ss_pred cccceeeee--cCCe-EEEEEc----CCcEEEEEeccc--ceeeE-EecC-CceEEEEEecCCC-----EEEEEECCCCE
Confidence 456899999 9996 999999 999999988643 22222 1123 3455557889988 888887 5 99
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
++||+.+... ...+.. |...|++++|+| ++++|++|+.||.|++||+.+++.. ..+.+|..
T Consensus 122 ~iwd~~~~~~--~~~~~~-----h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~-----------~~~~~h~~ 182 (420)
T 3vl1_A 122 KVLDSNFNLQ--REIDQA-----HVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNP-----------RTLIGHRA 182 (420)
T ss_dssp EEECTTSCEE--EEETTS-----SSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCC-----------EEEECCSS
T ss_pred EEEeCCCcce--eeeccc-----ccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCc-----------eEEcCCCC
Confidence 9999986542 223333 348999999998 8999999999999999999988876 56789999
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-CCC---------------------CceeEEEEeCCC
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-PQH---------------------TPLLRLAWNKQD 239 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~---------------------~~v~~~~~~~~~ 239 (349)
.|.+++|+|++ ++|++++.|+.|++||+++++....+... .+. ..+.+++|+| +
T Consensus 183 ~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 258 (420)
T 3vl1_A 183 TVTDIAIIDRG---RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-Y 258 (420)
T ss_dssp CEEEEEEETTT---TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-T
T ss_pred cEEEEEEcCCC---CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-C
Confidence 99999999998 89999999999999999987655544321 122 4455566678 8
Q ss_pred CCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688 240 PNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA 318 (349)
Q Consensus 240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 318 (349)
+.+|++|+.|+ .|++||++. ++.+..+ ..|...|++++|+|+++.+|++++.||.|++||+++... ++..+..
T Consensus 259 ~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~----~~~~~~~ 332 (420)
T 3vl1_A 259 GKYVIAGHVSG-VITVHNVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC----PVGEFLI 332 (420)
T ss_dssp TEEEEEEETTS-CEEEEETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----CSEEEEE
T ss_pred CCEEEEEcCCC-eEEEEECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC----chhhhhc
Confidence 89999999999 599999998 5544444 568899999999999994499999999999999988533 3555665
Q ss_pred -cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 319 -AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 319 -~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|...|.++.|. ++..|++++.|+.|++|++
T Consensus 333 ~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 333 NEGTPINNVYFA-AGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp STTSCEEEEEEE-TTEEEEEETTTEEEEEEEE
T ss_pred cCCCCceEEEeC-CCCEEEEecCCccEEEEec
Confidence 67788888654 6678888999999999984
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-38 Score=273.00 Aligned_cols=278 Identities=16% Similarity=0.229 Sum_probs=223.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL 101 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i 101 (349)
.+.+++|++ +. +++++. +|.|++|++. +++........|...|.+++|+|+++ +|++++ + .|
T Consensus 95 ~~~~~~~s~---~~--l~~~~~----d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~-----~l~~~~~dg~i 158 (401)
T 4aez_A 95 YLNLLDWSN---LN--VVAVAL----ERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGS-----FLSVGLGNGLV 158 (401)
T ss_dssp TCBCEEECT---TS--EEEEEE----TTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSS-----EEEEEETTSCE
T ss_pred eEEEEeecC---CC--EEEEEC----CCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCC-----EEEEECCCCeE
Confidence 455577663 33 667777 9999999886 34544444455889999999999998 888877 5 99
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
++||+.+.+. ...+.. |...|.+++|+ ++.|++|+.||.|++||++..... ...+.+|..
T Consensus 159 ~iwd~~~~~~--~~~~~~-----~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~~ 218 (401)
T 4aez_A 159 DIYDVESQTK--LRTMAG-----HQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQ----------IGTLQGHSS 218 (401)
T ss_dssp EEEETTTCCE--EEEECC-----CSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCE----------EEEEECCSS
T ss_pred EEEECcCCeE--EEEecC-----CCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcce----------eeEEcCCCC
Confidence 9999987642 223333 34789999994 479999999999999999854332 156788999
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEecc
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDVR 259 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~~ 259 (349)
.|.+++|+|++ ++|++++.|+.|++||+++++....+ ..+...|.+++|+|.+..++++++ .|+ .|++||++
T Consensus 219 ~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~ll~~~~gs~d~-~i~i~d~~ 292 (401)
T 4aez_A 219 EVCGLAWRSDG---LQLASGGNDNVVQIWDARSSIPKFTK--TNHNAAVKAVAWCPWQSNLLATGGGTMDK-QIHFWNAA 292 (401)
T ss_dssp CEEEEEECTTS---SEEEEEETTSCEEEEETTCSSEEEEE--CCCSSCCCEEEECTTSTTEEEEECCTTTC-EEEEEETT
T ss_pred CeeEEEEcCCC---CEEEEEeCCCeEEEccCCCCCccEEe--cCCcceEEEEEECCCCCCEEEEecCCCCC-EEEEEECC
Confidence 99999999998 89999999999999999987654443 357789999999996667777765 688 69999999
Q ss_pred CCCcceeEeecCCcceEEEEEeeCCCCEEEE--EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE
Q psy17688 260 VPCTPVARLNNHRACVNGIAWAPHSSCHICT--AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA 337 (349)
Q Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 337 (349)
+ ++++..+. +...|.+++|+|++++ |++ |+.||.|++||+..... .....+.+|...|.+++|+|++++|++
T Consensus 293 ~-~~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 293 T-GARVNTVD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGL---TKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp T-CCEEEEEE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEE---EEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred C-CCEEEEEe-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCccc---eeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 7 77777775 5678999999999998 666 55899999999987432 133456788999999999999999999
Q ss_pred EEcCCeEEEeeC
Q psy17688 338 ICYNKYLEVLRV 349 (349)
Q Consensus 338 ~~~d~~v~vw~v 349 (349)
++.|+.|++|++
T Consensus 367 ~~~dg~i~iw~~ 378 (401)
T 4aez_A 367 AASDENLKFWRV 378 (401)
T ss_dssp ECTTSEEEEEEC
T ss_pred EeCCCcEEEEEC
Confidence 999999999985
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-38 Score=277.31 Aligned_cols=296 Identities=13% Similarity=0.135 Sum_probs=228.4
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..+....|+| ++++ ||+|+. +|.|++|++.. ++.. .....|...|++++|+|+++ +|++++ | .
T Consensus 98 ~~~~~~~~~~--~~~~-l~~~~~----dg~i~iwd~~~--~~~~-~~~~~h~~~v~~~~~~~~~~-----~l~s~s~d~~ 162 (420)
T 3vl1_A 98 DYTAVDTAKL--QMRR-FILGTT----EGDIKVLDSNF--NLQR-EIDQAHVSEITKLKFFPSGE-----ALISSSQDMQ 162 (420)
T ss_dssp CEEEEEEECS--SSCE-EEEEET----TSCEEEECTTS--CEEE-EETTSSSSCEEEEEECTTSS-----EEEEEETTSE
T ss_pred CceEEEEEec--CCCE-EEEEEC----CCCEEEEeCCC--ccee-eecccccCccEEEEECCCCC-----EEEEEeCCCe
Confidence 3444556787 9995 999988 99999998863 3322 21237999999999999998 888887 5 9
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc--eee----
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH--VKT---- 174 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~---- 174 (349)
|++||+.+.+. ...+..| ...|.+++|+| ++.+|++++.||.|++||+++++....+...... .+.
T Consensus 163 i~iwd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 163 LKIWSVKDGSN--PRTLIGH-----RATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEEEETTTCCC--CEEEECC-----SSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EEEEeCCCCcC--ceEEcCC-----CCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 99999987653 2333443 47899999998 8999999999999999999998887544221100 000
Q ss_pred -------eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC-eEEEE
Q psy17688 175 -------QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN-YLAMV 246 (349)
Q Consensus 175 -------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~ 246 (349)
....+...+.+++|+|++ +++++++.||.|++||+++++...... ..+...+.+++|+| ++. +|++|
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~g 309 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYG---KYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDG-NNANYIYAG 309 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTT---EEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECS-SCTTEEEEE
T ss_pred ecCCcceeeecccCcccceEEcCCC---CEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeC-CCCCEEEEE
Confidence 011234567777888888 899999999999999999876554443 35678999999999 666 99999
Q ss_pred eeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCC
Q psy17688 247 AMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGG 321 (349)
Q Consensus 247 ~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~ 321 (349)
+.|+ .|++||+++...++..+.. |...|.++. .|++.+ |++++.|+.|++||+.....+. ......+..|.+
T Consensus 310 ~~dg-~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~-l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 310 YENG-MLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGAL-FVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp ETTS-EEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEE-EEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred eCCC-eEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCE-EEEecCCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 9999 6999999985566777776 667788875 567776 9999999999999998753321 112234667789
Q ss_pred ceEEEEEcCCCC---ceEEEEcCCeEEEeeC
Q psy17688 322 EINQIQWGATQP---DWIAICYNKYLEVLRV 349 (349)
Q Consensus 322 ~v~~~~~~~~~~---~l~~~~~d~~v~vw~v 349 (349)
.|.+++|+|+++ .+++++.+|.+.+|++
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred ceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 999999999998 7999999999999985
No 51
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-39 Score=272.91 Aligned_cols=251 Identities=17% Similarity=0.269 Sum_probs=195.7
Q ss_pred eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688 18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDLLAT 96 (349)
Q Consensus 18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 96 (349)
.......|++++|+| +++ +++++. +|.|+||++...+..... ....+|...|++++|+|+++ +|++
T Consensus 90 ~~~~~~~V~~~~~s~--d~~--~l~~s~----dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-----~l~s 156 (357)
T 4g56_B 90 GVQTEAGVTDVAWVS--EKG--ILVASD----SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-----QAVS 156 (357)
T ss_dssp EEECSSCEEEEEEET--TTE--EEEEET----TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-----EEEE
T ss_pred cCCCCCCEEEEEEcC--CCC--EEEEEC----CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-----EEEE
Confidence 344557899999998 886 556777 899999998754332222 22347999999999999998 8888
Q ss_pred eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688 97 SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT 174 (349)
Q Consensus 97 ~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 174 (349)
++ | .|++||+.+++. ...+..| ...|.+++|++....++++++.||.|++||+++++.... .
T Consensus 157 gs~dg~v~iwd~~~~~~--~~~~~~h-----~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~---------~ 220 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAV--LKSYNAH-----SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR---------I 220 (357)
T ss_dssp EETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB---------C
T ss_pred EeCCCeEEEEECCCCcE--EEEEcCC-----CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee---------e
Confidence 87 5 999999987642 2333443 378999999985556899999999999999998876621 1
Q ss_pred eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI 254 (349)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~ 254 (349)
.+..|...+.+++|+|++. .+|++|+.|+.|++||+++++....+ ..+...|.+++|+|+++.+|++|+.|+ +|+
T Consensus 221 ~~~~~~~~v~~v~~sp~~~--~~la~g~~d~~i~~wd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~-~i~ 295 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKD--DTFACGDETGNVSLVNIKNPDSAQTS--AVHSQNITGLAYSYHSSPFLASISEDC-TVA 295 (357)
T ss_dssp CCTTCCSCEEEEEECTTST--TEEEEEESSSCEEEEESSCGGGCEEE--CCCSSCEEEEEECSSSSCCEEEEETTS-CEE
T ss_pred eeccccccccchhhhhccc--ceEEEeecccceeEEECCCCcEeEEE--eccceeEEEEEEcCCCCCEEEEEeCCC-EEE
Confidence 2345677899999999863 78999999999999999987765544 357789999999995567899999999 599
Q ss_pred EEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecC
Q psy17688 255 ILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 255 v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
|||+++ ++.+.. .+|.+.|++++|+| ++.+ |++++.||+|++||+...
T Consensus 296 iwd~~~-~~~~~~-~~H~~~V~~vafsP~d~~~-l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 296 VLDADF-SEVFRD-LSHRDFVTGVAWSPLDHSK-FTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECTTS-CEEEEE-CCCSSCEEEEEECSSSTTE-EEEEETTSCEEEEECC--
T ss_pred EEECCC-CcEeEE-CCCCCCEEEEEEeCCCCCE-EEEEcCCCeEEEEECCCC
Confidence 999986 665544 57999999999999 6666 999999999999999763
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-39 Score=283.67 Aligned_cols=303 Identities=16% Similarity=0.127 Sum_probs=226.1
Q ss_pred cceeeee-ecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cc-cccceEecCCCCeeEEEEecCCCC
Q psy17688 13 QKEIYKY-EAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SE-FGPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 13 ~~~~~~~-~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
.+.+..+ +.+ .+|++++|+| .++++ ||+|+. ||.|+||++.... +. ........|...|.+++|+|++.
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~-~~~~~-l~s~s~----dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 124 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSP-GETPY-LITGSD----QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD- 124 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEEC-SSSCE-EEEEET----TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS-
T ss_pred ceEEeeeccCCCCceEEEEECC-CCCCE-EEEecC----CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC-
Confidence 3455666 554 8999999996 26775 999998 9999999986421 21 22344557999999999999988
Q ss_pred CCCcEEEEeC-C-cEEEEECC---CCCchhheeccCCC-------CCCCcCceeEEE--ecCCCCCeEEEEEcCCeEEEE
Q psy17688 89 VFPDLLATSG-D-YLRVWRAG---EPETRLECILNNNK-------NSDFCAPLTSFD--WNEVDPNLLGTSSIDTTCTIW 154 (349)
Q Consensus 89 ~~~~~l~~~~-~-~i~vw~~~---~~~~~~~~~~~~~~-------~~~~~~~i~~~~--~~~~~~~~l~~~~~dg~i~iw 154 (349)
+|++++ | .|++||++ .++. ......+. ...+...+.++. +++ ++.+|++|+.||.|++|
T Consensus 125 ----~l~s~s~dg~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iw 197 (437)
T 3gre_A 125 ----AFAVSSKDGQIIVLKVNHYQQESE--VKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIF 197 (437)
T ss_dssp ----EEEEEETTSEEEEEEEEEEEETTE--EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEE
T ss_pred ----EEEEEeCCCEEEEEEeccccCCce--eeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence 888877 5 99999995 2221 11111100 000235566666 455 78899999999999999
Q ss_pred eccCcceeeeecccCCceeeeeec--cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688 155 CLETNQVVGRVNSVSGHVKTQLIA--HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR 232 (349)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 232 (349)
|+++++.+ ..+.. |...|.+++|+|++ ++|++++.||.|++||+++++....+. ..+..+|.+
T Consensus 198 d~~~~~~~-----------~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~ 262 (437)
T 3gre_A 198 DIRTLERL-----------QIIENSPRHGAVSSICIDEEC---CVLILGTTRGIIDIWDIRFNVLIRSWS-FGDHAPITH 262 (437)
T ss_dssp ETTTCCEE-----------EEEECCGGGCCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEEEEB-CTTCEEEEE
T ss_pred eCCCCeee-----------EEEccCCCCCceEEEEECCCC---CEEEEEcCCCeEEEEEcCCccEEEEEe-cCCCCceEE
Confidence 99998887 55666 88999999999998 899999999999999999876544432 246678999
Q ss_pred EEEeCC---CCCeEEEEeeCCcEEEEEeccCCCcceeEeec--------------------------CCcceEEEEEeeC
Q psy17688 233 LAWNKQ---DPNYLAMVAMNACEVIILDVRVPCTPVARLNN--------------------------HRACVNGIAWAPH 283 (349)
Q Consensus 233 ~~~~~~---~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--------------------------~~~~v~~~~~~p~ 283 (349)
++|+|. ++.+|++|+.|+ .|++||+++ ++.+..+.+ |...|++++|+ +
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKT-FLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTE-EEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEeccccCCCccEEEEEcCCC-cEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 977762 577999999999 699999987 665555543 55678899999 6
Q ss_pred CCCEEEEEcCCCcEEEEEeecCCCCC--------------------------------CCcEEEEeccCCceEEEEEcCC
Q psy17688 284 SSCHICTAGDDHQALIWDIQQMPRAI--------------------------------EDPILAYTAAGGEINQIQWGAT 331 (349)
Q Consensus 284 ~~~~l~~~~~d~~v~iwd~~~~~~~~--------------------------------~~~~~~~~~~~~~v~~~~~~~~ 331 (349)
+++ |++++.|+.|++||+++.+... .........|...|++++|+++
T Consensus 340 ~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 340 DKI-LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp TEE-EEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred ceE-EEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 676 9999999999999998743210 0000112238899999999998
Q ss_pred --CCceEEEEcCCeEEEee
Q psy17688 332 --QPDWIAICYNKYLEVLR 348 (349)
Q Consensus 332 --~~~l~~~~~d~~v~vw~ 348 (349)
++.|++++.||.|+||+
T Consensus 419 ~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 419 DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSEEEEEEETTSCEEEEC
T ss_pred CCceEEEEEcCCceEEEeC
Confidence 77888999999999996
No 53
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=279.60 Aligned_cols=296 Identities=16% Similarity=0.251 Sum_probs=216.7
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-------ccc-ccceEecCC------------CCeeEEE
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-------SEF-GPKSTIDHP------------YPTTKIM 81 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-------~~~-~~~~~~~~~------------~~v~~~~ 81 (349)
..+|++++|+| +|++ ||+|+. +|.|+||++.... +++ ......+|. ..|++++
T Consensus 28 ~~~V~~v~~s~--~g~~-la~g~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 28 ADIISTVEFNH--SGEL-LATGDK----GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGSEEEEEECS--SSSE-EEEEET----TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cCcEEEEEECC--CCCE-EEEEcC----CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 47999999999 9996 999998 9999999987443 111 122234787 8899999
Q ss_pred EecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhe-eccC--------------------------------CCCCCCc
Q psy17688 82 WIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLEC-ILNN--------------------------------NKNSDFC 126 (349)
Q Consensus 82 ~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~-~~~~--------------------------------~~~~~~~ 126 (349)
|+|++... +|++++ | .|++|++.+....... .+.. .....|.
T Consensus 101 ~~~~~~~~---~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 101 WLPQKNAA---QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp ECCCCSSS---EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EcCCCCcc---eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 99997311 666666 6 9999998763311000 0000 0013456
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG 205 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~ 205 (349)
..|.+++|+| ++++|++| .||.|++||+++.. ....+... ...+.+|...|.+++|+|++. ++|++++.||
T Consensus 178 ~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~p~~~--~~l~s~~~dg 249 (447)
T 3dw8_B 178 YHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIK----PANMEELTEVITAAEFHPNSC--NTFVYSSSKG 249 (447)
T ss_dssp SCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECC----CSSGGGCCCCEEEEEECSSCT--TEEEEEETTS
T ss_pred cceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecc----cccccccCcceEEEEECCCCC--cEEEEEeCCC
Confidence 8999999998 89999998 79999999998543 33111000 013568999999999999863 6999999999
Q ss_pred cEEEEECCCCCc----eeeeeeCCCCC------------ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688 206 SVRMFDLRHLEH----STIIYEDPQHT------------PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN 269 (349)
Q Consensus 206 ~v~iwd~~~~~~----~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~ 269 (349)
.|++||+++++. ...+. .+.. .|.+++|+| ++.+|++++. + .|++||++..++++..+.
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~-~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFE--EPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-L-SVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEEC--CC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-S-EEEEEETTCCSSCSCCEE
T ss_pred eEEEEECcCCccccceeeEec--cCCCccccccccccCceEEEEEECC-CCCEEEEeeC-C-eEEEEeCCCCccccceee
Confidence 999999998764 22222 2333 899999999 9999999998 8 699999997678888888
Q ss_pred cCCcc---------------eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-----------------
Q psy17688 270 NHRAC---------------VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT----------------- 317 (349)
Q Consensus 270 ~~~~~---------------v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~----------------- 317 (349)
.|... +..++|+|++++ |++++.||.|++||+.+... ..+.
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 397 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRD------ITLEASRENNKPRTVLKPRKV 397 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCE------EEEECCSTTCCTTCBCCCCCE
T ss_pred ccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcc------eeeeecccccccccccCCccc
Confidence 88642 234999999998 99999999999999987431 1111
Q ss_pred ----------------ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 318 ----------------AAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 318 ----------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
.+...|..++|+|+++.|++++.+ .+.+|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~-~~~~~~ 443 (447)
T 3dw8_B 398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN-NLYIFQ 443 (447)
T ss_dssp ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS-CEEEEE
T ss_pred cccCCcccccccccccccCCceeEEEECCCCCEEEEEecc-eeeeec
Confidence 124578999999999866655555 577774
No 54
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-38 Score=267.97 Aligned_cols=248 Identities=18% Similarity=0.260 Sum_probs=206.2
Q ss_pred eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688 17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTIDHPYPTTKIMWIPDRKGVFPD 92 (349)
Q Consensus 17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 92 (349)
..+..+ ..|.+++|+| +|++ ||+|+. ++.+++|++...... ........|...|.+++|+|++.
T Consensus 100 ~~~~~~~~~v~~~~~sp--~g~~-lasg~~----d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----- 167 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAP--SGCA-IACGGL----DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM----- 167 (354)
T ss_dssp EEEECSSSCCCEEEECT--TSSE-EEEEST----TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-----
T ss_pred eEEecCCCCEEEEEECC--CCCE-EEEeeC----CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-----
Confidence 334434 6799999999 9996 999988 999999988643211 12223347999999999999998
Q ss_pred EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
.|++++ | +|++||+++++. ...+.+|. ..|.+++|+|. ++++|++|+.||.|++||+++++..
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~--~~~~~~h~-----~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~------- 233 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQL--LQSFHGHG-----ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV------- 233 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCE--EEEEECCS-----SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE-------
T ss_pred EEEEEeCCCcEEEEeCCCCeE--EEEEcCCC-----CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE-------
Confidence 777776 6 999999988652 23344443 78999999873 4689999999999999999998877
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
..+.+|...|.+++|+|++ .+|++++.|++|++||++..+.............+.+++|+| ++.+|++|+.|
T Consensus 234 ----~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d 305 (354)
T 2pbi_B 234 ----QAFETHESDVNSVRYYPSG---DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYND 305 (354)
T ss_dssp ----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETT
T ss_pred ----EEecCCCCCeEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC-CCCEEEEEECC
Confidence 6778999999999999999 899999999999999999876554443333445789999999 99999999999
Q ss_pred CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd 301 (349)
+ .|++||+.+ +..+..+.+|...|++++|+|++++ |++|+.|+.|++|+
T Consensus 306 ~-~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~-l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 306 Y-TINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTA-FCSGSWDHTLRVWA 354 (354)
T ss_dssp S-CEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSC-EEEEETTSEEEEEC
T ss_pred C-cEEEEECCC-CceEEEEECCCCcEEEEEECCCCCE-EEEEcCCCCEEecC
Confidence 9 599999987 7788889999999999999999999 99999999999996
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-38 Score=261.84 Aligned_cols=253 Identities=15% Similarity=0.226 Sum_probs=197.6
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-C
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG-D 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~-~ 99 (349)
.+|++++|+| +|++ ||+|+. |+.|+||+++....+.. ....+|..+|++++|+|+ ++ +|++|+ |
T Consensus 10 ~~V~~~~~s~--~g~~-las~s~----D~~v~iw~~~~~~~~~~-~~l~gH~~~V~~v~~s~~~~g~-----~l~s~s~D 76 (297)
T 2pm7_B 10 EMIHDAVMDY--YGKR-MATCSS----DKTIKIFEVEGETHKLI-DTLTGHEGPVWRVDWAHPKFGT-----ILASCSYD 76 (297)
T ss_dssp SCEEEEEECT--TSSE-EEEEET----TSCEEEEEBCSSCBCCC-EEECCCSSCEEEEEECCGGGCS-----EEEEEETT
T ss_pred CceEEEEECC--CCCE-EEEEeC----CCEEEEEecCCCCcEEE-EEEccccCCeEEEEecCCCcCC-----EEEEEcCC
Confidence 7899999998 9996 999998 99999999865433333 234589999999999864 55 888888 6
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI 177 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+|++||+.++.......+.. |...|.+++|+|.. +.+|++|+.||.|++||++++.... ...+.
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---------~~~~~ 142 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAV-----HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---------PIIID 142 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECC-----CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---------CEEEE
T ss_pred CEEEEEEcCCCceEEEEEeec-----CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---------eeeee
Confidence 99999998764322233333 34789999999832 7899999999999999998764220 14568
Q ss_pred ccCCceeeEEEecCCC----------CccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCC--CCeE
Q psy17688 178 AHDKEVYDIAFSRAGG----------GRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQD--PNYL 243 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~----------~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l 243 (349)
+|...|.+++|+|+.. ..++|++|+.|+.|++||+++++.. .......|...|.+++|+|.. +.+|
T Consensus 143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM 222 (297)
T ss_dssp CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEE
Confidence 8999999999999720 0168999999999999999876532 122234678899999999932 5899
Q ss_pred EEEeeCCcEEEEEeccCCCcc--eeEe--ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 244 AMVAMNACEVIILDVRVPCTP--VARL--NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 244 ~~~~~d~~~i~v~d~~~~~~~--~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
++++.|+ +|++||++..... ...+ ..|...|.+++|+|++++ |++++.|+.|++|+...
T Consensus 223 as~s~D~-~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 223 ASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEETTS-CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEETTSCEEEEEECT
T ss_pred EEEECCC-cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE-EEEEcCCCcEEEEEECC
Confidence 9999999 5999999763211 1223 467889999999999999 99999999999999874
No 56
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-38 Score=268.51 Aligned_cols=244 Identities=22% Similarity=0.363 Sum_probs=199.2
Q ss_pred EecCCCCeeEEEE-----ec-CCCCCCCcEEEEeC-C-cEEEEECCCCCch-----hheeccCCCCCCCcCceeEEEecC
Q psy17688 70 TIDHPYPTTKIMW-----IP-DRKGVFPDLLATSG-D-YLRVWRAGEPETR-----LECILNNNKNSDFCAPLTSFDWNE 136 (349)
Q Consensus 70 ~~~~~~~v~~~~~-----~~-~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~ 136 (349)
..+|.+.|++++| ++ +++ +|++|+ | +|++|++...+.. ....+. +|...|.+++|+|
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~-----~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-----~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSP-----VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-----GHNHFVSDLALSQ 86 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCC-----EEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-----CCSSCEEEEEECS
T ss_pred eccchhhhhheeeEEEeecCCCCC-----EEEEEcCCCEEEEEECCcCCcccccccccchhc-----cCCCceEEEEECC
Confidence 4479999999999 66 666 888888 6 9999999764321 112233 3447899999998
Q ss_pred CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC
Q psy17688 137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE 216 (349)
Q Consensus 137 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 216 (349)
++.++++|+.|++|++||+++++.. ..+.+|...|.+++|+|++ ++|++++.|+.|++||++...
T Consensus 87 -~~~~l~s~s~D~~v~lwd~~~~~~~-----------~~~~~h~~~v~~v~~sp~~---~~l~s~~~d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 -ENCFAISSSWDKTLRLWDLRTGTTY-----------KRFVGHQSEVYSVAFSPDN---RQILSAGAEREIKLWNILGEC 151 (343)
T ss_dssp -STTEEEEEETTSEEEEEETTSSCEE-----------EEEECCCSCEEEEEECSST---TEEEEEETTSCEEEEESSSCE
T ss_pred -CCCEEEEEcCCCcEEEEECCCCcEE-----------EEEcCCCCcEEEEEECCCC---CEEEEEcCCCEEEEEeccCCc
Confidence 8999999999999999999998877 6788999999999999999 899999999999999998532
Q ss_pred ceeeeeeCCCCCceeEEEEeCCCC----------CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 217 HSTIIYEDPQHTPLLRLAWNKQDP----------NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~~~~~~----------~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
.........+...+.+++|+| ++ .+|++++.|+ .|++||.. ......+.+|...|.+++|+|++++
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDG-RLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTS-EEEEEETT--TEEEEEEECCSSCEEEEEECTTSSE
T ss_pred eeeeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCC-EEEEEcCC--CceeEEEcCccccceEEEECCCCCE
Confidence 222222225678899999999 54 7899999999 69999954 5777888999999999999999998
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++|+.||.|++||+..... +...+. +...|.+++|+|++. +++++.|+.|++|++
T Consensus 228 -l~sgs~dg~v~iwd~~~~~~----~~~~~~-~~~~v~~v~~sp~~~-~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 228 -IATGGKDKKLLIWDILNLTY----PQREFD-AGSTINQIAFNPKLQ-WVAVGTDQGVKIFNL 283 (343)
T ss_dssp -EEEEETTCEEEEEESSCCSS----CSEEEE-CSSCEEEEEECSSSC-EEEEEESSCEEEEES
T ss_pred -EEEEcCCCeEEEEECCCCcc----cceeec-CCCcEEEEEECCCCC-EEEEECCCCEEEEEe
Confidence 99999999999999955322 233343 366799999999986 566778899999985
No 57
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.4e-38 Score=273.58 Aligned_cols=289 Identities=13% Similarity=0.172 Sum_probs=220.8
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc-ccceEecCCCCeeEEEEec-CCCCCCCcEEEEeC-C
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF-GPKSTIDHPYPTTKIMWIP-DRKGVFPDLLATSG-D 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~ 99 (349)
+....++++| +....+++|+. +|.|+||+++...... ......+|...|++++|+| ++. +|++|+ |
T Consensus 35 ~~~~~~~~~~--~~~~~~~~~~~----~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-----~l~s~s~d 103 (402)
T 2aq5_A 35 WDSGFCAVNP--KFMALICEASG----GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN-----VIASGSED 103 (402)
T ss_dssp CSSCSEEECS--SEEEEEBCCSS----SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT-----EEEEEETT
T ss_pred cCCCcEEECC--CeEEEEEEEcC----CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC-----EEEEEeCC
Confidence 4556678887 55432444666 9999999986442211 1122347999999999999 776 888888 5
Q ss_pred -cEEEEECCCCCc-----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688 100 -YLRVWRAGEPET-----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK 173 (349)
Q Consensus 100 -~i~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 173 (349)
.|++|++.++.. .....+.. |...|.+++|+|....+|++++.||.|++||+++++..
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----------- 167 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITLEG-----HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV----------- 167 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEEEC-----CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE-----------
T ss_pred CeEEEEEccCCCCccccCCceEEecC-----CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc-----------
Confidence 999999987642 12223333 34789999999833479999999999999999998876
Q ss_pred eee--eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE---ee
Q psy17688 174 TQL--IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV---AM 248 (349)
Q Consensus 174 ~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~ 248 (349)
..+ ..|...|.+++|+|++ ++|++++.|+.|++||+++++....+...+....+.+++|+| ++.+|++| +.
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDG---ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMS 243 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTS---SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTC
T ss_pred EEEecCCCCCceEEEEECCCC---CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCC
Confidence 456 6799999999999998 899999999999999999876555442333334489999999 89999999 68
Q ss_pred CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCceEE
Q psy17688 249 NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEINQ 325 (349)
Q Consensus 249 d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~ 325 (349)
|+ .|++||++....++.... .|...+.+++|+|++++++++++.||.|++||+..... .+..+.. |...|.+
T Consensus 244 d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~----~~~~l~~~~~~~~v~~ 318 (402)
T 2aq5_A 244 ER-QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP----FLHYLSMFSSKESQRG 318 (402)
T ss_dssp CE-EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT----CEEEEEEECCSSCCSE
T ss_pred Cc-eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc----ceEeecccccCCcccc
Confidence 88 699999997444454443 56788999999999998446777899999999988432 1333333 4689999
Q ss_pred EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 326 IQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 326 ~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
++|+|++..++ +.++.+++|++
T Consensus 319 ~~~sp~~~~~~--s~~~~~~~~~l 340 (402)
T 2aq5_A 319 MGYMPKRGLEV--NKCEIARFYKL 340 (402)
T ss_dssp EEECCGGGSCG--GGTEEEEEEEE
T ss_pred eEEecccccce--ecceeEEEEEc
Confidence 99999997654 46779999974
No 58
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.9e-38 Score=262.94 Aligned_cols=243 Identities=13% Similarity=0.211 Sum_probs=201.4
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch---hheeccCCCCCCCcCceeEEEecCCCCCeEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR---LECILNNNKNSDFCAPLTSFDWNEVDPNLLGT 144 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (349)
..+|.+.|++++|+|++.. +|++|+ | +|++|++...... ....+.+ |...|.+++|+| ++.+|++
T Consensus 13 l~gH~~~V~~l~~~~~~~~----~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~s~-dg~~l~s 82 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPN----LLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-----HSHIVQDCTLTA-DGAYALS 82 (319)
T ss_dssp ECCCSSCEEEEEECSSCTT----EEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-----CSSCEEEEEECT-TSSEEEE
T ss_pred EccccceEEEEEccCCCcc----EEEEecCCccEEEecCCCCCccccccceEEeC-----CcccEEEEEECC-CCCEEEE
Confidence 4489999999999997633 888888 6 9999998653321 1123334 447899999998 9999999
Q ss_pred EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688 145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED 224 (349)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 224 (349)
|+.|++|++||+.+++.. ..+.+|...|.+++|+|++ .++++++.|+.|++||++.. .... ..
T Consensus 83 ~s~D~~v~~wd~~~~~~~-----------~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~vwd~~~~-~~~~--~~ 145 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETY-----------QRFVGHKSDVMSVDIDKKA---SMIISGSRDKTIKVWTIKGQ-CLAT--LL 145 (319)
T ss_dssp EETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---CEEEEEETTSCEEEEETTSC-EEEE--EC
T ss_pred EeCCCEEEEEECCCCCee-----------EEEccCCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCC-eEEE--Ee
Confidence 999999999999998887 6788999999999999998 89999999999999999853 3222 23
Q ss_pred CCCCceeEEEEeCC-----CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688 225 PQHTPLLRLAWNKQ-----DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI 299 (349)
Q Consensus 225 ~~~~~v~~~~~~~~-----~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i 299 (349)
.+...+.+++|+|. ++..+++++.|+ .|++||++. .+....+.+|...|.+++|+|++++ |++++.||.|++
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~-~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~-l~s~~~dg~i~i 222 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDK-MVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTL-IASAGKDGEIML 222 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTS-CEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSE-EEEEETTCEEEE
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCC-EEEEEECCc-chhheeecCCCCcEEEEEEcCCCCE-EEEEeCCCeEEE
Confidence 57789999999983 244899999999 599999997 7788889999999999999999998 999999999999
Q ss_pred EEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 300 WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
||+.. .+++..+.. ...|.+++|+|++..++ ++.++.+++|++
T Consensus 223 wd~~~-----~~~~~~~~~-~~~v~~~~~sp~~~~la-~~~~~~i~v~~~ 265 (319)
T 3frx_A 223 WNLAA-----KKAMYTLSA-QDEVFSLAFSPNRYWLA-AATATGIKVFSL 265 (319)
T ss_dssp EETTT-----TEEEEEEEC-CSCEEEEEECSSSSEEE-EEETTEEEEEEE
T ss_pred EECCC-----CcEEEEecC-CCcEEEEEEcCCCCEEE-EEcCCCcEEEEe
Confidence 99987 345666665 57899999999997554 455667999863
No 59
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-38 Score=262.54 Aligned_cols=258 Identities=17% Similarity=0.227 Sum_probs=194.1
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
..+|..+|++++|+|+ +|++|+ | .|++|++..+.......+.. ..|...|.+++|+| ++++|++|+.
T Consensus 10 ~~~h~~~v~~~~~s~~-------~las~~~D~~i~lw~~~~~~~~~~~~~~~---~~h~~~v~~v~~sp-~~~~las~s~ 78 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG-------ILATGSTDRKIKLVSVKYDDFTLIDVLDE---TAHKKAIRSVAWRP-HTSLLAAGSF 78 (330)
T ss_dssp EECCSSCEEEEEEETT-------EEEEEESSSCEEEEECSSSCCEEEEEECT---TCCCSCEEEEEECT-TSSEEEEEET
T ss_pred eccCCCceeeeccCCC-------EEEEEcCCCEEEEEEecCCCeEEEEEEec---CCccCCEEEEEECC-CCCEEEEEeC
Confidence 4479999999999986 566665 6 99999998754222222211 12457899999998 8999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-c-eeeeeeCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-H-STIIYEDP 225 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~-~~~~~~~~ 225 (349)
|+.|++||+...... .........+.+|...|.+++|+|++ ++|++++.|++|++||++... . ........
T Consensus 79 D~~v~iw~~~~~~~~----~~~~~~~~~~~~h~~~V~~v~~sp~g---~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~ 151 (330)
T 2hes_X 79 DSTVSIWAKEESADR----TFEMDLLAIIEGHENEVKGVAWSNDG---YYLATCSRDKSVWIWETDESGEEYECISVLQE 151 (330)
T ss_dssp TSCEEEEEC-----------CCCEEEEEEC----CEEEEEECTTS---CEEEEEETTSCEEEEECCTTCCCCEEEEEECC
T ss_pred CCcEEEEEcccCcCc----cccceeEEEEcCCCCcEEEEEECCCC---CEEEEEeCCCEEEEEeccCCCCCeEEEEEecc
Confidence 999999998643210 00112235678999999999999999 899999999999999996432 1 12222345
Q ss_pred CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeC--CCCEEEEEcCCCcEEEEEe
Q psy17688 226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPH--SSCHICTAGDDHQALIWDI 302 (349)
Q Consensus 226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~d~~v~iwd~ 302 (349)
|...|.+++|+| ++.+|++++.|+ +|++||.+... +++..+.+|...|.+++|+|+ +.. |++++.|++|++||+
T Consensus 152 h~~~v~~v~~~p-~~~~l~s~s~D~-~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 152 HSQDVKHVIWHP-SEALLASSSYDD-TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR-LCSGSDDSTVRVWKY 228 (330)
T ss_dssp CSSCEEEEEECS-SSSEEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE-EEEEETTSCEEEEEE
T ss_pred CCCceEEEEECC-CCCEEEEEcCCC-eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE-EEEEeCCCeEEEEEe
Confidence 788999999999 999999999999 69999987622 578889999999999999998 555 999999999999999
Q ss_pred ecCCCCCC---CcEEEEec-cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 303 QQMPRAIE---DPILAYTA-AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 303 ~~~~~~~~---~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+....... .....+.. |...|.+++|++++ .|++++.|+.|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 87432111 12233333 88999999999776 7999999999999973
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=255.76 Aligned_cols=279 Identities=16% Similarity=0.236 Sum_probs=220.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
-..+|+||+ ++ .||+| . |++|+||+++ +++...... .+|...|++++|+|+++ +|++|+ | .
T Consensus 27 y~~~l~WS~--~~--~lAvg-~----D~tV~iWd~~--tg~~~~~~~~~~~~~~V~~v~~~~~~~-----~l~sgs~Dg~ 90 (318)
T 4ggc_A 27 YLNLVDWSS--GN--VLAVA-L----DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSAE 90 (318)
T ss_dssp TCBCEEECT--TS--EEEEE-E----TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTSE
T ss_pred cceEEEECC--CC--EEEEE-e----CCEEEEEECC--CCCEEEEEEecCCCCeEEEEEECCCCC-----EEEEEECCCc
Confidence 467899997 65 38876 4 8999999876 455444332 36788899999999998 888888 5 9
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|++|++++++. ...+..|. ..+.++.+ .+..+++++.++.+++|+........ ..+.+|.
T Consensus 91 v~iw~~~~~~~--~~~~~~h~-----~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 150 (318)
T 4ggc_A 91 VQLWDVQQQKR--LRNMTSHS-----ARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHV----------ATLSGHS 150 (318)
T ss_dssp EEEEETTTTEE--EEEEECCS-----SCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEE----------EEEECCS
T ss_pred EEEeecCCcee--EEEecCcc-----ceEEEeec---CCCEEEEEecCCceEeeecCCCceeE----------EEEcCcc
Confidence 99999988753 23333433 56666654 56799999999999999988765542 5678999
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEE--EEeeCCcEEEEE
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLA--MVAMNACEVIIL 256 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~--~~~~d~~~i~v~ 256 (349)
..+..+.+++++ +++++++.|+.|++||+++++.. .......+...+.+++++|.+...+. +++.++ .|++|
T Consensus 151 ~~~~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~lw 226 (318)
T 4ggc_A 151 QEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRIW 226 (318)
T ss_dssp SCEEEEEECTTS---SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTC-EEEEE
T ss_pred CceEEEEEcCCC---CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCC-EEEEE
Confidence 999999999999 89999999999999999986532 22333456788999999996666554 455677 69999
Q ss_pred eccCCCcceeEeecCCcceEEEEEeeCCCCEEE-EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCce
Q psy17688 257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHIC-TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDW 335 (349)
Q Consensus 257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 335 (349)
|.+. ..... ...+...+..+.|+|++..+++ +++.|+.|++||+++ .+++..+.+|.+.|++++|+|++++|
T Consensus 227 d~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-----~~~~~~l~gH~~~V~~l~~spdg~~l 299 (318)
T 4ggc_A 227 NVCS-GACLS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----MAKVAELKGHTSRVLSLTMSPDGATV 299 (318)
T ss_dssp ETTT-CCEEE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred eccc-ccccc-cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9986 44333 3446788999999999998333 244799999999988 45688999999999999999999999
Q ss_pred EEEEcCCeEEEeeC
Q psy17688 336 IAICYNKYLEVLRV 349 (349)
Q Consensus 336 ~~~~~d~~v~vw~v 349 (349)
++++.|++|+||++
T Consensus 300 ~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 300 ASAAADETLRLWRC 313 (318)
T ss_dssp EEEETTTEEEEECC
T ss_pred EEEecCCeEEEEEC
Confidence 99999999999986
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=265.91 Aligned_cols=290 Identities=19% Similarity=0.269 Sum_probs=229.0
Q ss_pred cccceeeeeecC-CceeeEEEeecCC---CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCC
Q psy17688 11 TTQKEIYKYEAP-WPLYSMNWSVRPD---KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDR 86 (349)
Q Consensus 11 ~~~~~~~~~~~~-~~v~~~~~sp~~~---~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 86 (349)
.+.+.+..+..+ .+|++++|+| + |++ ||+|+. +|.|+||++... +........+|...|.+++|+|++
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~--~~~~g~~-l~~~~~----dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSP--PTLPGNF-LIAGSW----ANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDG 98 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECC--TTSSSEE-EEEEET----TSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTS
T ss_pred CCcceeEeccCCCCceEEEEEcC--CCCCceE-EEEECC----CCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCC
Confidence 344555566655 7999999999 7 585 999988 999999999753 333323455799999999999999
Q ss_pred CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe--cCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688 87 KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW--NEVDPNLLGTSSIDTTCTIWCLETNQVV 162 (349)
Q Consensus 87 ~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 162 (349)
+ +|++++ | .|++||+.+.+.. .... |...|.+++| +| ++.+|++++.||.|++||+++++..
T Consensus 99 ~-----~l~s~~~dg~v~iwd~~~~~~~---~~~~-----~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 99 S-----KVFTASCDKTAKMWDLSSNQAI---QIAQ-----HDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp S-----EEEEEETTSEEEEEETTTTEEE---EEEE-----CSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCS
T ss_pred C-----EEEEEcCCCcEEEEEcCCCCce---eecc-----ccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEE
Confidence 8 888877 5 9999999886522 1222 3478999999 76 8889999999999999999988876
Q ss_pred eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688 163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNY 242 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 242 (349)
..+..+. .+.++.+.+ ..+++++.++.+++||++..................++++.+ +...
T Consensus 165 -----------~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 226 (368)
T 3mmy_A 165 -----------MVLQLPE-RCYCADVIY-----PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQN 226 (368)
T ss_dssp -----------EEEECSS-CEEEEEEET-----TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTS
T ss_pred -----------EEEecCC-CceEEEecC-----CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCC
Confidence 4455444 566666653 578888899999999999865544444444556677777776 4444
Q ss_pred ----EEEEeeCCcEEEEEeccCCC--cceeEeecCCc------------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 243 ----LAMVAMNACEVIILDVRVPC--TPVARLNNHRA------------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 243 ----l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~~------------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+++++.|+ .|++||++... ..+..+..|.. .|++++|+|++++ |++++.||.|++||+++
T Consensus 227 ~~~~~~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 227 KPTGFALGSIEG-RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDA 304 (368)
T ss_dssp CEEEEEEEETTS-EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-EEEEETTSCEEEEETTT
T ss_pred CCCeEEEecCCC-cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-EEEEccCCeEEEEECCC
Confidence 99999999 69999998732 56777888776 7999999999998 99999999999999987
Q ss_pred CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688 305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw 347 (349)
..++..+..|..+|.+++|+|++++|++++.|+..+.|
T Consensus 305 -----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 305 -----RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp -----TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred -----CcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 44577888899999999999999999999988754443
No 62
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.6e-38 Score=264.27 Aligned_cols=254 Identities=15% Similarity=0.167 Sum_probs=196.0
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG- 98 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~- 98 (349)
..+|++++|+| +|++ ||+|+. |+.|+||++...... ......+|...|++++|+|+ +. +|++|+
T Consensus 13 ~~~V~~v~~s~--~g~~-lasgs~----D~~v~lwd~~~~~~~-~~~~l~gH~~~V~~v~~~~~~~~~-----~l~s~s~ 79 (316)
T 3bg1_A 13 EDMIHDAQMDY--YGTR-LATCSS----DRSVKIFDVRNGGQI-LIADLRGHEGPVWQVAWAHPMYGN-----ILASCSY 79 (316)
T ss_dssp -CCEEEEEECG--GGCE-EEEEET----TTEEEEEEEETTEEE-EEEEEECCSSCEEEEEECCGGGSS-----CEEEEET
T ss_pred cCeEEEeeEcC--CCCE-EEEEeC----CCeEEEEEecCCCcE-EEEEEcCCCccEEEEEeCCCCCCC-----EEEEEEC
Confidence 37899999999 9996 999998 999999998643221 22234589999999999863 55 788877
Q ss_pred C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688 99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL 176 (349)
Q Consensus 99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 176 (349)
| +|++||+.++.......+.. |...|.+++|+|.. +.+|++|+.||.|++||++.+.... ....+
T Consensus 80 D~~v~iWd~~~~~~~~~~~~~~-----h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~--------~~~~~ 146 (316)
T 3bg1_A 80 DRKVIIWREENGTWEKSHEHAG-----HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE--------VKKIN 146 (316)
T ss_dssp TSCEEEECCSSSCCCEEEEECC-----CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE--------ECCBT
T ss_pred CCEEEEEECCCCcceEEEEccC-----CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc--------eeeee
Confidence 6 99999998754222223333 34789999999832 7899999999999999998763220 11345
Q ss_pred eccCCceeeEEEecCCC--------------CccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCC-
Q psy17688 177 IAHDKEVYDIAFSRAGG--------------GRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDP- 240 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~~~--------------~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~- 240 (349)
.+|...|.+++|+|+.. ...+|++++.|+.|++||++..... .......|...|.+++|+| ++
T Consensus 147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~ 225 (316)
T 3bg1_A 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIG 225 (316)
T ss_dssp TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSS
T ss_pred ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCC
Confidence 78999999999999721 0158999999999999999764321 2222335778999999999 54
Q ss_pred ---CeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 241 ---NYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 241 ---~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.+|++++.|+ +|++||++... .....+..|...|.+++|+|++++ |++++.|+.|++|+...
T Consensus 226 ~~~~~las~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~-las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 226 LPTSTIASCSQDG-RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI-LAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CSCCEEEEEETTC-EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC-EEEEESSSCEEEEEECT
T ss_pred CCCceEEEEcCCC-eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCE-EEEEcCCCeEEEEEECC
Confidence 8999999999 69999987521 123456678999999999999998 99999999999999864
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-37 Score=290.20 Aligned_cols=289 Identities=16% Similarity=0.170 Sum_probs=241.3
Q ss_pred eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
...+..+ ..|.+++|+| ++++ ||+|+. +|.|+||++.. ++... ....|..+|.+++|+|+++ +|
T Consensus 6 ~~~~~~h~~~v~~i~~sp--~~~~-la~~~~----~g~v~iwd~~~--~~~~~-~~~~~~~~v~~~~~s~~~~-----~l 70 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHP--TEPW-VLTTLY----SGRVEIWNYET--QVEVR-SIQVTETPVRAGKFIARKN-----WI 70 (814)
T ss_dssp EEEEEEECSCEEEEEECS--SSSE-EEEEET----TSEEEEEETTT--TEEEE-EEECCSSCEEEEEEEGGGT-----EE
T ss_pred ceeeecCCCceEEEEECC--CCCE-EEEEeC----CCEEEEEECCC--CceEE-EEecCCCcEEEEEEeCCCC-----EE
Confidence 3444544 7899999999 9996 999988 99999998853 33333 2447999999999999998 88
Q ss_pred EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++++ + .|++|++.+++. ...+..| ...|++++|+| ++..|++++.||.|++||+.++....
T Consensus 71 ~~~~~dg~i~vw~~~~~~~--~~~~~~~-----~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~--------- 133 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEK--VVDFEAH-----PDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALE--------- 133 (814)
T ss_dssp EEEETTSEEEEEETTTCCE--EEEEECC-----SSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEE---------
T ss_pred EEEeCCCeEEEEECCCCcE--EEEEecC-----CCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEE---------
Confidence 8887 5 999999988753 2233333 37899999998 89999999999999999998873331
Q ss_pred eeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCC
Q psy17688 173 KTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNA 250 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~ 250 (349)
..+.+|...|.+++|+| ++ ..+++++.||.|++||+++++...... ..+...+.+++|+|. ++.++++++.|+
T Consensus 134 -~~~~~~~~~v~~~~~~p~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg 208 (814)
T 3mkq_A 134 -QTFEGHEHFVMCVAFNPKDP---STFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDL 208 (814)
T ss_dssp -EEEECCSSCEEEEEEETTEE---EEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred -EEEcCCCCcEEEEEEEcCCC---CEEEEEeCCCeEEEEECCCCcceeEEe-cCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence 56788999999999999 66 899999999999999998876554443 345588999999984 678999999999
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
.|++||++. +.++..+.+|...|++++|+|++++ |++++.||.|++||+.+ ...+..+..|...+.+++|+|
T Consensus 209 -~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~v~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 209 -TIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST-----YKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp -EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT-----CSEEEEECCSSSSEEEEEECT
T ss_pred -EEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-----CcEEEEeecCCCcEEEEEEcc
Confidence 699999987 7888999999999999999999998 99999999999999987 445778888899999999999
Q ss_pred CCCce-EEEEcCCeEEEeeC
Q psy17688 331 TQPDW-IAICYNKYLEVLRV 349 (349)
Q Consensus 331 ~~~~l-~~~~~d~~v~vw~v 349 (349)
++..+ ++++.++.+.+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 281 TGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp TCGGGEEEEEETTEEEEEEC
T ss_pred CCCceEEEEEeCCCEEEEEc
Confidence 98764 77778888888864
No 64
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-38 Score=272.29 Aligned_cols=261 Identities=18% Similarity=0.310 Sum_probs=208.3
Q ss_pred ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc---ccc-ccceEecCCCCeeEEEEecCCCC
Q psy17688 14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI---SEF-GPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~---~~~-~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
+.+..+..+ ..|.+++|+| +|++ ||+|+. |+.+++|++.... +.. ......+|...|.++.|+|++..
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~--~g~~-las~~~----d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~ 171 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAP--NGQS-VACGGL----DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQET 171 (380)
T ss_dssp EEEEEEECCCTTCCCCEECT--TSSE-EEECCS----SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSS
T ss_pred ccceEEecCCCCEEEEEECC--CCCE-EEEeeC----CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCC
Confidence 344455555 6799999999 9996 999988 9999999986421 111 22224479999999999998653
Q ss_pred CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc-ceeeee
Q psy17688 89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN-QVVGRV 165 (349)
Q Consensus 89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~ 165 (349)
.|++|+ | +|++||+.+++.. ..+......+|...|.+++|++.++++|++|+.||.|++||++.. +..
T Consensus 172 ----~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~--- 242 (380)
T 3iz6_a 172 ----RLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV--- 242 (380)
T ss_dssp ----CEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC---
T ss_pred ----EEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce---
Confidence 677777 6 9999999887532 222222234566899999998878899999999999999999843 443
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-----CCCceeEEEEeCCCC
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-----QHTPLLRLAWNKQDP 240 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~ 240 (349)
..+.+|...|.+++|+|++ ++|++++.|++|++||+++++......... +...+.+++|+| ++
T Consensus 243 --------~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g 310 (380)
T 3iz6_a 243 --------RTYHGHEGDINSVKFFPDG---QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SG 310 (380)
T ss_dssp --------EEECCCSSCCCEEEECTTS---SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SS
T ss_pred --------EEECCcCCCeEEEEEecCC---CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CC
Confidence 5678999999999999999 899999999999999999976554443211 123489999999 99
Q ss_pred CeEEEEeeCCcEEEEEeccCCCcceeEe----ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 241 NYLAMVAMNACEVIILDVRVPCTPVARL----NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
.+|++|+.|+ .|++||+.. ++.+..+ .+|.+.|++++|+|++.+ |++|+.|+.|++|++...
T Consensus 311 ~~l~~g~~dg-~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 311 RLLFAGYSNG-DCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSA-LCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SEEEEECTTS-CEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSE-EEEECTTSCEEEEECCSS
T ss_pred CEEEEEECCC-CEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCE-EEEeeCCCCEEEEecCCC
Confidence 9999999999 599999987 6666655 679999999999999998 999999999999999863
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-38 Score=270.66 Aligned_cols=256 Identities=15% Similarity=0.247 Sum_probs=208.6
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSS 146 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 146 (349)
..+|...|++++|+|+++ +|++++ | .|++|++..........+..|. .+|++++|++. ++++|++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp EEECCCCEEEEEECSSSS-----EEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEE
T ss_pred ecCCcccEEEEEEcCCCC-----EEEEEECCCcEEEEecCCCcceeeeEecCCC-----CcEEEEEeCCCCCCCEEEEec
Confidence 457999999999999998 888887 6 9999999854433334444443 78999999862 289999999
Q ss_pred cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688 147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED 224 (349)
Q Consensus 147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 224 (349)
.||.|++||+.+++... ...+..|...|.+++|+|+ + .++++++.|+.|++||++...........
T Consensus 77 ~dg~v~iwd~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQ---------IAVHAVHSASVNSVQWAPHEYG---PLLLVASSDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp TTSCEEEEEEETTEEEE---------EEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEECCTTSCCCEEEEE
T ss_pred cCCEEEEEEcCCCceeE---------eeeecCCCcceEEEEeCCCCCC---CEEEEecCCCcEEEEecCCCCceeeEEec
Confidence 99999999999886321 1567789999999999999 7 79999999999999999987554444445
Q ss_pred CCCCceeEEEEeCC------------CCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeC---CCC
Q psy17688 225 PQHTPLLRLAWNKQ------------DPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPH---SSC 286 (349)
Q Consensus 225 ~~~~~v~~~~~~~~------------~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~---~~~ 286 (349)
.+...|.+++|+|. ++.+|++++.|+ .|++||++... .....+.+|...|.+++|+|+ +.+
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 67889999999995 589999999999 59999998633 244567889999999999999 776
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++++.||.|++||++.........+.....|...|.+++|+|++++|++++.|+.|++|++
T Consensus 224 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 224 -LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp -EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred -EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 99999999999999998543211111122337889999999999999999999999999984
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-37 Score=262.70 Aligned_cols=277 Identities=13% Similarity=0.118 Sum_probs=225.8
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCC-CCCCcEEEEeCC-
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRK-GVFPDLLATSGD- 99 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~l~~~~~- 99 (349)
...|++++|+| ++++ |++|+. +|.|+||+++.............|...|.+++|+|+++ . +++++.+
T Consensus 11 ~~~v~~~~~s~--~~~~-l~~~~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~dg 79 (342)
T 1yfq_A 11 KDYISDIKIIP--SKSL-LLITSW----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ----IYVGTVQG 79 (342)
T ss_dssp SSCEEEEEEEG--GGTE-EEEEET----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEE----EEEEETTS
T ss_pred CCcEEEEEEcC--CCCE-EEEEcC----CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcE----EEEEcCCC
Confidence 37899999999 9996 999988 99999999975543333344558999999999999975 3 4444446
Q ss_pred cEEEEEC-CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC---------cceeeeecccC
Q psy17688 100 YLRVWRA-GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET---------NQVVGRVNSVS 169 (349)
Q Consensus 100 ~i~vw~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~ 169 (349)
.|++|++ .+... ..+.. ..|...|.+++|+| ++.|++++.|+.|++||+++ ++..
T Consensus 80 ~i~~wd~~~~~~~---~~~~~---~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------- 144 (342)
T 1yfq_A 80 EILKVDLIGSPSF---QALTN---NEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS------- 144 (342)
T ss_dssp CEEEECSSSSSSE---EECBS---CCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-------
T ss_pred eEEEEEeccCCce---Eeccc---cCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCee-------
Confidence 9999999 77642 22333 01447899999997 88999999999999999987 5544
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
..+. |...|.+++|+|+ .+++++.|+.|++||+++ +..........+...+.+++|+|.++.++++++.
T Consensus 145 ----~~~~-~~~~v~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 145 ----NNTK-VKNKIFTMDTNSS-----RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp ----SSSS-SCCCEEEEEECSS-----EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred ----eEEe-eCCceEEEEecCC-----cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 3334 8889999999874 399999999999999998 6544444445677899999999855789999999
Q ss_pred CCcEEEEEeccCC-----CcceeEeecCCc---------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688 249 NACEVIILDVRVP-----CTPVARLNNHRA---------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL 314 (349)
Q Consensus 249 d~~~i~v~d~~~~-----~~~~~~~~~~~~---------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 314 (349)
|+ .|++||++.. ......+..|.. .|.+++|+|++++ |++++.||.|++||+++ .+++.
T Consensus 215 dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~~-----~~~~~ 287 (342)
T 1yfq_A 215 DG-RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQT-----RKKIK 287 (342)
T ss_dssp TS-EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTT-----TEEEE
T ss_pred CC-cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCcc-----HhHhh
Confidence 99 6999999874 277888888865 9999999999999 99999999999999987 34567
Q ss_pred EEecc-CCceEEEEEcCCCCceEEEEcCCe
Q psy17688 315 AYTAA-GGEINQIQWGATQPDWIAICYNKY 343 (349)
Q Consensus 315 ~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~ 343 (349)
.+..| ...|.+++ |++.+|++++.|+.
T Consensus 288 ~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 288 NFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp ECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred hhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 78888 99999999 99999999999987
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-36 Score=276.26 Aligned_cols=299 Identities=15% Similarity=0.247 Sum_probs=223.7
Q ss_pred eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecC-CCCCCC
Q psy17688 17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPD-RKGVFP 91 (349)
Q Consensus 17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~ 91 (349)
..+..+ ..|++++|+| ++++.|++++. ++.|++|++.. ++... ....|.. .|.+++|+|+ ++
T Consensus 154 ~~~~~~~~~v~~~~~~~--~~~~~l~~~~~----d~~v~vwd~~~--~~~~~-~~~~~~~~~~~v~~~~~~~~~~~---- 220 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQ--SRPMRSMTVGD----DGSVVFYQGPP--FKFSA-SDRTHHKQGSFVRDVEFSPDSGE---- 220 (615)
T ss_dssp EECCSCSSCEEEEEECS--SSSCEEEEEET----TTEEEEEETTT--BEEEE-EECSSSCTTCCEEEEEECSTTCC----
T ss_pred eeeecCCccEEEEEECC--CCCcEEEEEeC----CCcEEEEeCCC--cceee-eecccCCCCceEEEEEECCCCCC----
Confidence 334444 6899999999 88755899988 99999998753 33322 2346888 8999999999 87
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheec-cCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECIL-NNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (349)
+|++++ + .|++||+.+++.. ..+ . ....|...|.+++|+ ++.+|++++.||.|++||+++++....+...
T Consensus 221 -~l~~~~~dg~i~vwd~~~~~~~--~~~~~--~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 221 -FVITVGSDRKISCFDGKSGEFL--KYIED--DQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp -EEEEEETTCCEEEEETTTCCEE--EECCB--TTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -EEEEEeCCCeEEEEECCCCCEe--EEecc--cccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 788777 5 9999999876522 222 2 001344789999998 8899999999999999999987766554321
Q ss_pred ----------------------------------CCceeeeeeccCCceeeEEEecC-----------------------
Q psy17688 169 ----------------------------------SGHVKTQLIAHDKEVYDIAFSRA----------------------- 191 (349)
Q Consensus 169 ----------------------------------~~~~~~~~~~~~~~v~~~~~~~~----------------------- 191 (349)
.+.....+.+|...|.+++| |+
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCC
T ss_pred CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCccc
Confidence 01222334444444444443 21
Q ss_pred ----------CCCccEEEEEcC----------------------------------------------------------
Q psy17688 192 ----------GGGRDMFASVGA---------------------------------------------------------- 203 (349)
Q Consensus 192 ----------~~~~~~l~~~~~---------------------------------------------------------- 203 (349)
+ ..+++++.
T Consensus 373 ~~v~~~~~~~~---~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (615)
T 1pgu_A 373 NLIVSLDNSKA---QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 449 (615)
T ss_dssp SCEEEEECCST---TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred CceEEEEECCC---cEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCc
Confidence 2 34444444
Q ss_pred ----------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE
Q psy17688 204 ----------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR 267 (349)
Q Consensus 204 ----------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~ 267 (349)
|+.|++||+.+++... .....+...|.+++|+| ++.+|++++.|+ .|++||+.+ ++.+..
T Consensus 450 ~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg-~i~iw~~~~-~~~~~~ 525 (615)
T 1pgu_A 450 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISP-SETYIAAGDVMG-KILLYDLQS-REVKTS 525 (615)
T ss_dssp EEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-TEEEEC
T ss_pred eEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECC-CCCEEEEcCCCC-eEEEeeCCC-CcceeE
Confidence 4445555544432211 22235678899999999 999999999999 599999997 788888
Q ss_pred eec-CCcceEEEEEee----------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688 268 LNN-HRACVNGIAWAP----------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI 336 (349)
Q Consensus 268 ~~~-~~~~v~~~~~~p----------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 336 (349)
+.+ |...|++++|+| ++++ |++++.||.|++||+.... .++..+.+|...|++++|+|+++ |+
T Consensus 526 ~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~~----~~~~~~~~h~~~v~~l~~s~~~~-l~ 599 (615)
T 1pgu_A 526 RWAFRTSKINAISWKPAEKGANEEEIEEDL-VATGSLDTNIFIYSVKRPM----KIIKALNAHKDGVNNLLWETPST-LV 599 (615)
T ss_dssp CSCCCSSCEEEEEECCCC------CCSCCE-EEEEETTSCEEEEESSCTT----CCEEETTSSTTCEEEEEEEETTE-EE
T ss_pred eecCCCCceeEEEEcCccccccccccCCCE-EEEEcCCCcEEEEECCCCc----eechhhhcCccceEEEEEcCCCC-eE
Confidence 887 999999999999 9998 9999999999999998742 35777889999999999999999 99
Q ss_pred EEEcCCeEEEeeC
Q psy17688 337 AICYNKYLEVLRV 349 (349)
Q Consensus 337 ~~~~d~~v~vw~v 349 (349)
+++.|+.|++|++
T Consensus 600 s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 600 SSGADACIKRWNV 612 (615)
T ss_dssp EEETTSCEEEEEE
T ss_pred EecCCceEEEEee
Confidence 9999999999985
No 68
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.1e-37 Score=254.99 Aligned_cols=242 Identities=18% Similarity=0.323 Sum_probs=202.5
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
..+|...|++++|+|+++ +|++++ | .|++|++.+++. ...+..| ...|.+++|+| ++++|++|+.
T Consensus 19 ~~gh~~~v~~~~~s~~~~-----~l~s~~~dg~i~iw~~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~~ 85 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGE-----WLASSSADKLIKIWGAYDGKF--EKTISGH-----KLGISDVAWSS-DSNLLVSASD 85 (312)
T ss_dssp ECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTCCE--EEEECCC-----SSCEEEEEECT-TSSEEEEEET
T ss_pred EcccCCcEEEEEECCCCC-----EEEEeeCCCeEEEEeCCCccc--chhhccC-----CCceEEEEEcC-CCCEEEEECC
Confidence 347999999999999998 888887 5 999999987652 2333333 37899999998 8999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
||.|++||+++++.+ ..+.+|...|.+++|+|++ +++++++.|+.|++||+++++....+ ..+.
T Consensus 86 d~~i~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~ 149 (312)
T 4ery_A 86 DKTLKIWDVSSGKCL-----------KTLKGHSNYVFCCNFNPQS---NLIVSGSFDESVRIWDVKTGKCLKTL--PAHS 149 (312)
T ss_dssp TSEEEEEETTTCCEE-----------EEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCS
T ss_pred CCEEEEEECCCCcEE-----------EEEcCCCCCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCEEEEEe--cCCC
Confidence 999999999998877 6778999999999999998 89999999999999999987655443 3567
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
.+|.+++|+| ++.+|++++.|+ .|++||+++ ++.+..+ ..+...+..++|+|++++ |++++.|+.|++||++.
T Consensus 150 ~~v~~~~~~~-~~~~l~~~~~d~-~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~-- 223 (312)
T 4ery_A 150 DPVSAVHFNR-DGSLIVSSSYDG-LCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSK-- 223 (312)
T ss_dssp SCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSE-EEEEETTTEEEEEETTT--
T ss_pred CcEEEEEEcC-CCCEEEEEeCCC-cEEEEECCC-CceeeEEeccCCCceEEEEECCCCCE-EEEEcCCCeEEEEECCC--
Confidence 8999999999 999999999999 599999997 5656555 456678999999999998 99999999999999987
Q ss_pred CCCCCcEEEEeccCCceE--EEEEc-CCCCceEEEEcCCeEEEeeC
Q psy17688 307 RAIEDPILAYTAAGGEIN--QIQWG-ATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~--~~~~~-~~~~~l~~~~~d~~v~vw~v 349 (349)
.+++..+.+|...+. ...|+ +++.++++++.|+.|++|++
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 224 ---GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp ---TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred ---CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 345677777765433 23444 56777888888999999985
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.3e-36 Score=297.48 Aligned_cols=288 Identities=17% Similarity=0.266 Sum_probs=238.0
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D- 99 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~- 99 (349)
...|++++|+| +|++ ||+|+. +|.|+||++.. ++... ...+|...|.+++|+|+++ +|++++ |
T Consensus 615 ~~~v~~~~~s~--~~~~-l~s~~~----d~~i~vw~~~~--~~~~~-~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~ 679 (1249)
T 3sfz_A 615 TDAVYHACFSQ--DGQR-IASCGA----DKTLQVFKAET--GEKLL-DIKAHEDEVLCCAFSSDDS-----YIATCSADK 679 (1249)
T ss_dssp SSCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS-----EEEEEETTS
T ss_pred cccEEEEEECC--CCCE-EEEEeC----CCeEEEEECCC--CCEEE-EeccCCCCEEEEEEecCCC-----EEEEEeCCC
Confidence 37999999999 9996 999988 99999998863 33332 2347999999999999998 888887 5
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++||+.+++. ...+..| ...|.+++|+|. +...+++|+.||.|++||+.+++.. ..+.+
T Consensus 680 ~v~vwd~~~~~~--~~~~~~~-----~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-----------~~~~~ 741 (1249)
T 3sfz_A 680 KVKIWDSATGKL--VHTYDEH-----SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR-----------NTMFG 741 (1249)
T ss_dssp EEEEEETTTCCE--EEEEECC-----SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE-----------EEECC
T ss_pred eEEEEECCCCce--EEEEcCC-----CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh-----------heecC
Confidence 999999988752 2333343 478999999873 3458999999999999999998877 67789
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee------------------------------------
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY------------------------------------ 222 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------------ 222 (349)
|...|.+++|+|++ +++++++.||.|++||+++++......
T Consensus 742 h~~~v~~~~~sp~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDD---ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp CSSCEEEEEECSST---TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred CCCCEEEEEEecCC---CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 99999999999999 899999999999999998654322111
Q ss_pred -----------------eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC
Q psy17688 223 -----------------EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS 285 (349)
Q Consensus 223 -----------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 285 (349)
...+...+.+++|+| ++.++++++.++ .|++||+.. +..+..+.+|...|++++|+|+++
T Consensus 819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg-~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQY-CVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGS 895 (1249)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSS-CEEEEETTT-TEEEEEECCCSSCEEEEEECTTSS
T ss_pred CcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCC-eEEEEEcCC-CceeeecCCCccceEEEEECCCCC
Confidence 114567889999999 999999999999 599999997 888899999999999999999999
Q ss_pred CEEEEEcCCCcEEEEEeecCC-----------------------------------------------------------
Q psy17688 286 CHICTAGDDHQALIWDIQQMP----------------------------------------------------------- 306 (349)
Q Consensus 286 ~~l~~~~~d~~v~iwd~~~~~----------------------------------------------------------- 306 (349)
. |++++.||.|++||+....
T Consensus 896 ~-l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 974 (1249)
T 3sfz_A 896 S-FLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE 974 (1249)
T ss_dssp E-EEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS
T ss_pred E-EEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC
Confidence 8 9999999999999965310
Q ss_pred ---------------CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 307 ---------------RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 307 ---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.........+.+|...|++++|+|+++++++++.|+.|++|++
T Consensus 975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp EEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred EEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 0012234455678889999999999999999999999999985
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-36 Score=282.98 Aligned_cols=309 Identities=12% Similarity=0.043 Sum_probs=202.0
Q ss_pred cceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD 92 (349)
Q Consensus 13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 92 (349)
......+.....|++++|+| ++++ ||+|+. +|.|+||+... .+. .....|...|.+++|+| ++
T Consensus 8 ~~~~~~~gh~~~V~~lafsp--dg~~-lAsgs~----Dg~I~lw~~~~--~~~--~~~~~~~~~V~~l~fsp-g~----- 70 (902)
T 2oaj_A 8 LAETNKYGMSSKPIAAAFDF--TQNL-LAIATV----TGEVHIYGQQQ--VEV--VIKLEDRSAIKEMRFVK-GI----- 70 (902)
T ss_dssp EEEEEEEECSSCEEEEEEET--TTTE-EEEEET----TSEEEEECSTT--CEE--EEECSSCCCEEEEEEET-TT-----
T ss_pred eccccccCCCCCcEEEEECC--CCCE-EEEEeC----CCEEEEEeCCC--cEE--EEEcCCCCCEEEEEEcC-CC-----
Confidence 34455566678999999999 9996 999998 99999997642 222 22345778899999999 65
Q ss_pred EEEEeC-C-cEEEEECCCCCchhheeccC-----------------------------------------------CCCC
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLECILNN-----------------------------------------------NKNS 123 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~-----------------------------------------------~~~~ 123 (349)
+|++++ | .|++||+.+++.. ..+.. ....
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~~~--~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQKVL--TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEEETTCEEEEEETTTCSEE--EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEEEECcCeEEEEECCCCcEE--EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 777776 5 9999998765421 11110 0011
Q ss_pred CCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC--Cce-----eeeeeccCCceeeEEEecCCCCcc
Q psy17688 124 DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS--GHV-----KTQLIAHDKEVYDIAFSRAGGGRD 196 (349)
Q Consensus 124 ~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~v~~~~~~~~~~~~~ 196 (349)
.|..+|.+++|+|.+...+++|+.||.| +||+++++....+.... +.. ......|...|.+++|+|++ .
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg---~ 224 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS---L 224 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS---S
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC---C
Confidence 2334444555554223444555555555 55554444432111000 000 00012235779999999999 8
Q ss_pred EEEEEcCCCcEEEEECCCCCceeeeee-----C-----------CCCCceeEE---------------------------
Q psy17688 197 MFASVGAEGSVRMFDLRHLEHSTIIYE-----D-----------PQHTPLLRL--------------------------- 233 (349)
Q Consensus 197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~-----------~~~~~v~~~--------------------------- 233 (349)
+|++++.||.|++||+++++....... . .+..+|.++
T Consensus 225 ~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 225 HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999999976542210000 0 000011111
Q ss_pred --------------------------------------------------------------------------------
Q psy17688 234 -------------------------------------------------------------------------------- 233 (349)
Q Consensus 234 -------------------------------------------------------------------------------- 233 (349)
T Consensus 305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g 384 (902)
T 2oaj_A 305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG 384 (902)
T ss_dssp EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence
Q ss_pred ---------------------------------------------------------EEeCCCCCeEEEEeeCCcEEEEE
Q psy17688 234 ---------------------------------------------------------AWNKQDPNYLAMVAMNACEVIIL 256 (349)
Q Consensus 234 ---------------------------------------------------------~~~~~~~~~l~~~~~d~~~i~v~ 256 (349)
+|+| ++++|++|+.|+ +|++|
T Consensus 385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~Dg-tVrlW 462 (902)
T 2oaj_A 385 IFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNG-SVRIY 462 (902)
T ss_dssp CEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTS-EEEEE
T ss_pred CcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccc-cCcEEEEecCCC-cEEEE
Confidence 1234 456788888888 68888
Q ss_pred eccCCCcce----eEe--e-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC--------C--------
Q psy17688 257 DVRVPCTPV----ARL--N-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--------I-------- 309 (349)
Q Consensus 257 d~~~~~~~~----~~~--~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~--------~-------- 309 (349)
|+.. +... ... . +|...|++++|+|++++ ||+|+.||+|+|||+...+.. .
T Consensus 463 d~~~-g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~-LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 540 (902)
T 2oaj_A 463 DASH-GDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLE-LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRR 540 (902)
T ss_dssp ESSC-CTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTE-EEEEETTSCEEEEEEEECCC---------------CCS
T ss_pred ECCC-ccccCCceEEeechhhcCCCCCCceeEEEecCCCCe-EEEEecCcEEEEEEecCccccCccccCCCcccceeeee
Confidence 8875 3211 111 1 78889999999999998 999999999999999875210 0
Q ss_pred ------------------------CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 310 ------------------------EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 310 ------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..++..+.+|.+.|++++|+|+| +|++++.|++|++|++
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 541 FSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp CCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 02366788899999999999999 8999999999999985
No 71
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-36 Score=256.83 Aligned_cols=262 Identities=18% Similarity=0.276 Sum_probs=206.5
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch--hheeccCCCCCCCcCceeEEEecCC-CCCeEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR--LECILNNNKNSDFCAPLTSFDWNEV-DPNLLGT 144 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~ 144 (349)
..+|.+.|++++|+|+++ +|++++ | .|++|++.+.... ....+.. |..+|++++|+|. ++++|++
T Consensus 7 ~~gH~~~v~~~~~~~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGR-----HVATCSSDQHIKVFKLDKDTSNWELSDSWRA-----HDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp ECCCSSCEEEEEECSSSS-----EEEEEETTSEEEEEEECSSSCCEEEEEEEEC-----CSSCEEEEEECCGGGCSEEEE
T ss_pred CcccccceeEEEEcCCCC-----EEEEeeCCCeEEEEECCCCCCcceecceecc-----CCCcEEEEEEcCCCCCCEEEE
Confidence 457999999999999998 888887 5 9999999875432 2222333 3479999999974 4899999
Q ss_pred EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeee
Q psy17688 145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIY 222 (349)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 222 (349)
|+.||.|++||+++++..... ........+..|...|.+++|+|+ + .++++++.||.|++||+++++......
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSG--RRWNKLCTLNDSKGSLYSVKFAPAHLG---LKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSS--CSEEEEEEECCCSSCEEEEEECCGGGC---SEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred EcCCCeEEEEecCCCcccccc--cCcceeeeecccCCceeEEEEcCCCCC---cEEEEecCCCcEEEecCCChHHhcccc
Confidence 999999999999886421000 000122567889999999999999 7 899999999999999999876432211
Q ss_pred -----------eCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCC---
Q psy17688 223 -----------EDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHS--- 284 (349)
Q Consensus 223 -----------~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~--- 284 (349)
...+...+.+++|+|. ++.++++++.++ .+.+|+... +. .+..+.+|...|++++|+|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-EEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC-cEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCc
Confidence 1245678999999993 389999999999 587777665 44 367778899999999999998
Q ss_pred -CCEEEEEcCCCcEEEEEeecCCCC-----------------------------------------CCCcEEEEeccCCc
Q psy17688 285 -SCHICTAGDDHQALIWDIQQMPRA-----------------------------------------IEDPILAYTAAGGE 322 (349)
Q Consensus 285 -~~~l~~~~~d~~v~iwd~~~~~~~-----------------------------------------~~~~~~~~~~~~~~ 322 (349)
.+ |++++.||.|++||++..... ...++..+.+|...
T Consensus 230 ~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (351)
T 3f3f_A 230 YQL-IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE 308 (351)
T ss_dssp SEE-EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred ceE-EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence 55 999999999999999874210 01345667889999
Q ss_pred eEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 323 INQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 323 v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++++|+|++++|++++.|+.|++|++
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 999999999999999999999999984
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=258.54 Aligned_cols=288 Identities=13% Similarity=0.171 Sum_probs=219.6
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE----------ecCCCCeeEEEEecCCCCCCC
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST----------IDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~ 91 (349)
..+|++++|+| .++++ ||+|+. +|.|++|++............ ..|...|.+++|+|++..
T Consensus 43 ~~~v~~~~~s~-~~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--- 113 (408)
T 4a11_B 43 GGGINTLDIEP-VEGRY-MLSGGS----DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG--- 113 (408)
T ss_dssp SSCEEEEEECT-TTCCE-EEEEET----TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT---
T ss_pred CCcEEEEEEec-CCCCE-EEEEcC----CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc---
Confidence 37999999996 36775 999988 999999998754322211100 148899999999994432
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC--CCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV--DPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
+|++++ | .|++||+.+.+... .+. +...+.++.|++. ++.++++++.||.|++||+++++..
T Consensus 114 -~l~s~~~d~~i~iwd~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~----- 179 (408)
T 4a11_B 114 -MFTSSSFDKTLKVWDTNTLQTAD--VFN------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS----- 179 (408)
T ss_dssp -CEEEEETTSEEEEEETTTTEEEE--EEE------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-----
T ss_pred -EEEEEeCCCeEEEeeCCCCccce--ecc------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-----
Confidence 677766 6 99999998864322 121 1257888999873 3349999999999999999988776
Q ss_pred cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--------------eCCCCCceeEE
Q psy17688 168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--------------EDPQHTPLLRL 233 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------~~~~~~~v~~~ 233 (349)
..+..|...|.+++|+|++. .++++++.||.|++||++......... ...+...|.++
T Consensus 180 ------~~~~~~~~~v~~~~~~~~~~--~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 180 ------HILQGHRQEILAVSWSPRYD--YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ------EEECCCCSCEEEEEECSSCT--TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred ------eeecCCCCcEEEEEECCCCC--cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 56788999999999999982 369999999999999998765222211 02466889999
Q ss_pred EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688 234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308 (349)
Q Consensus 234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~ 308 (349)
+|+| ++.+|++++.|+ .|++||+++ ++....+..+ ...+........+.. +++++.|+.|++||+.+
T Consensus 252 ~~~~-~~~~l~~~~~dg-~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~d~~~---- 323 (408)
T 4a11_B 252 CFTS-DGLHLLTVGTDN-RMRLWNSSN-GENTLVNYGKVCNNSKKGLKFTVSCGCSSE-FVFVPYGSTIAVYTVYS---- 323 (408)
T ss_dssp EECT-TSSEEEEEETTS-CEEEEETTT-CCBCCCCCCCCCCCCSSCCCCEECCSSSSC-EEEEEETTEEEEEETTT----
T ss_pred EEcC-CCCEEEEecCCC-eEEEEECCC-CccceeccccccccccccceeEEecCCCce-EEEEecCCEEEEEECcC----
Confidence 9999 999999999999 599999987 4444333221 112222222333455 77788899999999988
Q ss_pred CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..++..+.+|...|++++|+|++++|++++.||.|++|++
T Consensus 324 -~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 324 -GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp -CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred -CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 4568889999999999999999999999999999999984
No 73
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.1e-36 Score=252.61 Aligned_cols=264 Identities=13% Similarity=0.191 Sum_probs=205.3
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEEEec--CCCCCCCcEEEEeC
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIMWIP--DRKGVFPDLLATSG 98 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~~~~~~~l~~~~ 98 (349)
..+|++++|+| ++++ ||+|+. +|.|++|++.......... ...+|...|.+++|+| ++. +|++++
T Consensus 11 ~~~v~~~~~~~--~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-----~l~s~~ 78 (351)
T 3f3f_A 11 DDLVHDVVYDF--YGRH-VATCSS----DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-----IIASAS 78 (351)
T ss_dssp SSCEEEEEECS--SSSE-EEEEET----TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-----EEEEEE
T ss_pred ccceeEEEEcC--CCCE-EEEeeC----CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-----EEEEEc
Confidence 37899999999 9996 999988 9999999997554432222 2347999999999999 466 888877
Q ss_pred -C-cEEEEECCCCCchh-------heeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 99 -D-YLRVWRAGEPETRL-------ECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 99 -~-~i~vw~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
| .|++||+..+.... ...+. .|...|.+++|+| + +.+|++++.||.|++||+++++....+..
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLN-----DSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEEC-----CCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeec-----ccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 6 99999998764211 22222 3447899999998 7 89999999999999999998876543211
Q ss_pred cCC--ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC----C
Q psy17688 168 VSG--HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP----N 241 (349)
Q Consensus 168 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~ 241 (349)
... ........|...+.+++|+|+...+..+++++.++.+.+|+...++.........+...|.+++|+| ++ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~ 231 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQ 231 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSE
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcce
Confidence 000 0001123677889999999971112899999999999888888765544444456788999999999 66 7
Q ss_pred eEEEEeeCCcEEEEEeccCC---------------------------------------------CcceeEeecCCcceE
Q psy17688 242 YLAMVAMNACEVIILDVRVP---------------------------------------------CTPVARLNNHRACVN 276 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~---------------------------------------------~~~~~~~~~~~~~v~ 276 (349)
+|++++.|+ .|++||++.. .+.+..+.+|...|+
T Consensus 232 ~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 232 LIATGCKDG-RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp EEEEEETTS-CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred EEEEEcCCC-eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 999999999 5999999862 156667788999999
Q ss_pred EEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 277 GIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 277 ~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
+++|+|++++ |++++.||.|++||+....
T Consensus 311 ~~~~s~~~~~-l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 311 SVSWNLTGTI-LSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEECSSSCC-EEEEETTSCEEEEEECTTS
T ss_pred EEEEcCCCCE-EEEecCCCcEEEEecCcCc
Confidence 9999999998 9999999999999999743
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-36 Score=256.74 Aligned_cols=254 Identities=15% Similarity=0.225 Sum_probs=203.1
Q ss_pred eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcE
Q psy17688 17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDL 93 (349)
Q Consensus 17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~ 93 (349)
..+..+ .+|++++|+| ++++ ||+|+. +|.|+||++...+++... ...+|...|++++|+++ +. +
T Consensus 5 ~~~~~h~~~v~~~~~s~--~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~-----~ 71 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDY--YGKR-LATCSS----DKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGT-----I 71 (379)
T ss_dssp CCEEECCCCEEEEEECS--SSSE-EEEEET----TSCEEEEEEETTEEEEEE-EECCCSSCEEEEEECCGGGCS-----E
T ss_pred EEecCCcccEEEEEEcC--CCCE-EEEEEC----CCcEEEEecCCCcceeee-EecCCCCcEEEEEeCCCCCCC-----E
Confidence 344544 7999999999 9996 999988 999999999754444332 24479999999999977 65 8
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
|++++ | .|++||+.+++......+..| ...|.+++|+| + +.+|++++.||.|++||+.+.....
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~------ 139 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAVH-----SASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS------ 139 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCC------
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecCC-----CcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCcee------
Confidence 88887 5 999999988653233333333 37899999998 6 8999999999999999998875431
Q ss_pred CceeeeeeccCCceeeEEEec-------------CCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEE
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSR-------------AGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLA 234 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~-------------~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~ 234 (349)
...+..|...|.+++|+| ++ .++++++.|+.|++||++.++.. .......|...|.+++
T Consensus 140 ---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 140 ---PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp ---EEEEECCTTCEEEEEECCCC----------CTT---CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred ---eEEecCCCCceEEEEEcCccccccccccCCCCC---CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 135678999999999999 46 79999999999999999876543 2223345778999999
Q ss_pred EeCCC---CCeEEEEeeCCcEEEEEeccCCCc----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 235 WNKQD---PNYLAMVAMNACEVIILDVRVPCT----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 235 ~~~~~---~~~l~~~~~d~~~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
|+| + +.+|++++.|+ .|++||++.... .+.....|...|++++|+|++++ |++++.||.|++||+..
T Consensus 214 ~sp-~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 214 WSP-TVLLRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 287 (379)
T ss_dssp ECC-CCSSSEEEEEEETTS-CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEESSSSEEEEEEEE
T ss_pred ECC-CCCCCCeEEEEeCCC-EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE-EEEecCCCcEEEEeCCC
Confidence 999 6 89999999999 599999987321 22223348889999999999999 99999999999999984
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.2e-35 Score=256.51 Aligned_cols=288 Identities=13% Similarity=0.193 Sum_probs=222.1
Q ss_pred eeeecC-Cc-eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 17 YKYEAP-WP-LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 17 ~~~~~~-~~-v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
..+..+ .+ +.++.|+ +++ |++|+. +|.|++|++.. ++... ...+|...|.+++|+|++ ++
T Consensus 115 ~~l~~h~~~v~~~~~~~----~~~-l~sgs~----dg~i~vwd~~~--~~~~~-~~~~h~~~V~~l~~~~~~------~l 176 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQFE----DNY-VITGAD----DKMIRVYDSIN--KKFLL-QLSGHDGGVWALKYAHGG------IL 176 (464)
T ss_dssp EEEECCSSSCEEEEEEE----TTE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEECSTT------EE
T ss_pred EEEcCCCCCcEEEEEEC----CCE-EEEEcC----CCcEEEEECCC--CcEEE-EEeCCCcCEEEEEEcCCC------EE
Confidence 345544 34 5666654 564 999998 99999998853 33332 234799999999999987 56
Q ss_pred EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecc----
Q psy17688 95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNS---- 167 (349)
Q Consensus 95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---- 167 (349)
++|+ | .|++||+.+++. ...+.. |...|.+++|++ .++.++++|+.||.|++||+.+.........
T Consensus 177 ~s~s~dg~i~vwd~~~~~~--~~~~~~-----h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 177 VSGSTDRTVRVWDIKKGCC--THVFEG-----HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp EEEETTSCEEEEETTTTEE--EEEECC-----CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred EEEeCCCCEEEEECCCCcE--EEEECC-----CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 6665 6 999999987642 233333 347899999984 2678999999999999999988765422110
Q ss_pred --------cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC
Q psy17688 168 --------VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD 239 (349)
Q Consensus 168 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 239 (349)
........+.+|...+.++ ++++ +++++++.|+.|++||+++++....+ ..+...|.+++|+| +
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~---~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~-~ 321 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTV--SGHG---NIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDH-E 321 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEE--EEET---TEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEET-T
T ss_pred ceEeeccCCCeEEEEEccCccceEEEE--cCCC---CEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCEEEEEEcC-C
Confidence 0111235677888888887 5666 79999999999999999987655444 35778999999999 9
Q ss_pred CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688 240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA 319 (349)
Q Consensus 240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 319 (349)
+.++++|+.|+ .|++||+++ ++++..+.+|...|.++.|+ +.+ |++++.||.|++||++... ..... .|
T Consensus 322 ~~~l~sg~~dg-~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~-l~s~s~dg~v~vwd~~~~~-----~~~~~-~~ 390 (464)
T 3v7d_B 322 RKRCISASMDT-TIRIWDLEN-GELMYTLQGHTALVGLLRLS--DKF-LVSAAADGSIRGWDANDYS-----RKFSY-HH 390 (464)
T ss_dssp TTEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCEEEEEEC--SSE-EEEEETTSEEEEEETTTCC-----EEEEE-EC
T ss_pred CCEEEEEeCCC-cEEEEECCC-CcEEEEEeCCCCcEEEEEEc--CCE-EEEEeCCCcEEEEECCCCc-----eeeee-cC
Confidence 99999999999 599999997 88999999999999999998 455 9999999999999998732 23333 34
Q ss_pred CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 320 GGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...+..++|++++..+++++ |+.|++|++
T Consensus 391 ~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 391 TNLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp TTCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred CCCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 77888899999998666665 999999985
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-37 Score=265.38 Aligned_cols=248 Identities=15% Similarity=0.196 Sum_probs=188.9
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (349)
+..+|++++|+|+++ +|++++ | .|++|++.+........+.. |...|.+++|+| ++++|++++.||.
T Consensus 10 ~~~~v~~~~~s~~g~-----~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----h~~~v~~~~~s~-~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRT-----EFVTTTATNQVELYEQDGNGWKHARTFSD-----HDKIVTCVDWAP-KSNRIVTCSQDRN 78 (377)
T ss_dssp CSSCCSCCEECSSSS-----EEECCCSSSCBCEEEEETTEEEECCCBCC-----CSSCEEEEEECT-TTCCEEEEETTSS
T ss_pred CCCcEEEEEECCCCC-----EEEEecCCCEEEEEEccCCceEEEEEEec-----CCceEEEEEEeC-CCCEEEEEeCCCe
Confidence 567899999999998 899986 5 99999998763223333333 447899999998 8999999999999
Q ss_pred EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc--eeeeeeCCCCC
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH--STIIYEDPQHT 228 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~ 228 (349)
|++||+.+++.. .....+..|...|.+++|+|++ ++|++++.|+.|++||++.++. ........+..
T Consensus 79 v~vwd~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 147 (377)
T 3dwl_C 79 AYVYEKRPDGTW--------KQTLVLLRLNRAATFVRWSPNE---DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS 147 (377)
T ss_dssp EEEC------CC--------CCEEECCCCSSCEEEEECCTTS---SCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred EEEEEcCCCCce--------eeeeEecccCCceEEEEECCCC---CEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence 999999987711 1114567899999999999998 8999999999999999998753 12222223788
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-----------------CcceeEeecCCcceEEEEEeeCCCCEEEEE
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-----------------CTPVARLNNHRACVNGIAWAPHSSCHICTA 291 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-----------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 291 (349)
.|.+++|+| ++.+|++++.|+ .|++||++.. ++++..+ .|...|++++|+|++++ |+++
T Consensus 148 ~v~~~~~~~-~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~ 223 (377)
T 3dwl_C 148 TILSLDWHP-NNVLLAAGCADR-KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYA 223 (377)
T ss_dssp CEEEEEECT-TSSEEEEEESSS-CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEE
T ss_pred CeEEEEEcC-CCCEEEEEeCCC-EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEE
Confidence 999999999 999999999999 5999998521 3455556 89999999999999998 9999
Q ss_pred cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 292 GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 292 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
+.||.|++||++....+. ..+..+..|...|.+++|+|++.+|++++ ++.+.+|+
T Consensus 224 ~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~~~~ 278 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPP-RALITVKLSQLPLRSLLWANESAIVAAGY-NYSPILLQ 278 (377)
T ss_dssp ETTTEEC-CEECSTTSCE-EECCCEECSSSCEEEEEEEETTEEEEEES-SSSEEEEC
T ss_pred eCCCcEEEEECCCCCCcc-eeeEeecCCCCceEEEEEcCCCCEEEEEc-CCcEEEEE
Confidence 999999999999854311 11456788899999999999998665554 44445664
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7e-36 Score=255.27 Aligned_cols=246 Identities=12% Similarity=0.183 Sum_probs=206.4
Q ss_pred cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688 72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT 149 (349)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 149 (349)
.|..+|++++|+|+++ +|++++ + .|++|++.+.+......+..| ...|.+++|+| ++++|++++.||
T Consensus 6 ~~~~~i~~~~~s~~~~-----~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~-~~~~l~~~~~dg 74 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRT-----QIAICPNNHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAP-DSNRIVTCGTDR 74 (372)
T ss_dssp SCSSCCCEEEECTTSS-----EEEEECSSSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEET-TTTEEEEEETTS
T ss_pred ccCCCeEEEEECCCCC-----EEEEEeCCCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeC-CCCEEEEEcCCC
Confidence 4888999999999998 888886 5 999999987642233344444 37899999998 999999999999
Q ss_pred eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCC
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQH 227 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~ 227 (349)
.|++||+.+++.... ..+..|...|.+++|+|++ ++|++++.|+.|++||++..+.. .......+.
T Consensus 75 ~i~vwd~~~~~~~~~---------~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPT---------LVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp CEEEEEEETTEEEEE---------EECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred eEEEEECCCCeeeee---------EEeecCCCceeEEEECCCC---CEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 999999988765421 2346788999999999998 89999999999999999987642 222234567
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-----------------CCcceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-----------------PCTPVARLNNHRACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 290 (349)
..|.+++|+| ++.+|++++.|+ .|++||++. .++++..+..|...|.+++|+|++.+ |++
T Consensus 143 ~~i~~~~~~~-~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~ 219 (372)
T 1k8k_C 143 STVLSLDWHP-NSVLLAAGSCDF-KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAW 219 (372)
T ss_dssp SCEEEEEECT-TSSEEEEEETTS-CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE-EEE
T ss_pred CCeeEEEEcC-CCCEEEEEcCCC-CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE-EEE
Confidence 8999999999 999999999999 599999641 25677888899999999999999998 999
Q ss_pred EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
++.|+.|++||++. .+++..+..|..+|.+++|+|++. +++++.|+.|++|++
T Consensus 220 ~~~d~~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~d~~i~i~~~ 272 (372)
T 1k8k_C 220 VSHDSTVCLADADK-----KMAVATLASETLPLLAVTFITESS-LVAAGHDCFPVLFTY 272 (372)
T ss_dssp EETTTEEEEEEGGG-----TTEEEEEECSSCCEEEEEEEETTE-EEEEETTSSCEEEEE
T ss_pred EeCCCEEEEEECCC-----CceeEEEccCCCCeEEEEEecCCC-EEEEEeCCeEEEEEc
Confidence 99999999999998 456788889999999999999997 455559999999974
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-36 Score=269.29 Aligned_cols=261 Identities=12% Similarity=0.088 Sum_probs=195.8
Q ss_pred EecCCCCeeEEEEecCCCCC----CCcEEEE-------------------eC-C-cEEEEECCCCCchhh--eeccCCCC
Q psy17688 70 TIDHPYPTTKIMWIPDRKGV----FPDLLAT-------------------SG-D-YLRVWRAGEPETRLE--CILNNNKN 122 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~----~~~~l~~-------------------~~-~-~i~vw~~~~~~~~~~--~~~~~~~~ 122 (349)
.+.+.+.|.+|+|+|++... ...+||+ ++ | +|+||++.+++.... ..+..+
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~-- 206 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS-- 206 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEEC--
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEec--
Confidence 44577889999999986110 0015555 34 4 899999977542211 112222
Q ss_pred CCCcCceeEEEecCC-----CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccE
Q psy17688 123 SDFCAPLTSFDWNEV-----DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDM 197 (349)
Q Consensus 123 ~~~~~~i~~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 197 (349)
...|.+++|+|. ++.+||+++.||+|++||+.++............+...+.+|...|.+++|+|++ .
T Consensus 207 ---~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~----~ 279 (524)
T 2j04_B 207 ---FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT----T 279 (524)
T ss_dssp ---CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS----E
T ss_pred ---CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC----e
Confidence 367999999983 2579999999999999999876432000000012224678899999999999854 7
Q ss_pred EEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEE--EEeCCCC-CeEEEEeeCCcEEEEEeccCCCcceeEeecCCc-
Q psy17688 198 FASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL--AWNKQDP-NYLAMVAMNACEVIILDVRVPCTPVARLNNHRA- 273 (349)
Q Consensus 198 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~- 273 (349)
|++|+.||+|++||++++....... ..|...|.++ +|+| ++ .+|++|+.|+ +|++||+++ .+++..+.+|..
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~-~g~~~laS~S~D~-tvklWD~~~-~~~~~~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSD-FEDTVVSTVAVDG-YFYIFNPKD-IATTKTTVSRFRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCT-TSCCEEEEEETTS-EEEEECGGG-HHHHCEEEEECSC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEEEEcCC-CCCeEEEEeccCC-eEEEEECCC-CCccccccccccc
Confidence 9999999999999999764332222 3578899999 5677 76 8999999999 799999997 677777777653
Q ss_pred -ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 274 -CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 274 -~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.|.+++|+|+++. |++++.|+.|++||++.. ..+..+.+|.+.|++++|+|+++.|++++.|++|++|++
T Consensus 356 ~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~-----~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 356 SNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAA-----FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CSCCCEEEETTTTE-EEEECSSSEEEEEETTCT-----TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CcccceEeCCCcCe-EEEeCCCCcEEEEECccc-----ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 5889999999998 999999999999999883 345678889999999999999999999999999999974
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-36 Score=282.25 Aligned_cols=301 Identities=13% Similarity=0.134 Sum_probs=207.1
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-----------------ecCCCCeeEEEEecC
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----------------IDHPYPTTKIMWIPD 85 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~ 85 (349)
.+|++++|+| ++...|++|+. +|.| +|++... +...... ..|...|++++|+|+
T Consensus 152 ~~V~sl~~sp--~~~~~l~~g~~----dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 152 SPIVSIQWNP--RDIGTVLISYE----YVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp CCCCEEEEET--TEEEEEEEECS----SCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred CCeEEEEEcc--CCCCEEEEEeC----CCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 6899999998 64324889988 9999 9998643 2221111 123577999999999
Q ss_pred CCCCCCcEEEEeC-C-cEEEEECCCCCchhheec---cCCCC-----C---CCcCceeEEEecCC---C-CCeEEEEEcC
Q psy17688 86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECIL---NNNKN-----S---DFCAPLTSFDWNEV---D-PNLLGTSSID 148 (349)
Q Consensus 86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~---~~~~~-----~---~~~~~i~~~~~~~~---~-~~~l~~~~~d 148 (349)
+. +|++++ | .|++||+.+++......+ ..|.. . .+..+|++++|++. + +.+|++|+.|
T Consensus 223 g~-----~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 223 SL-----HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp SS-----EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred CC-----EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 98 888888 5 999999987653211111 11110 0 13357888888531 2 2456666554
Q ss_pred -----CeEEEEec-------------------------------------------------------------------
Q psy17688 149 -----TTCTIWCL------------------------------------------------------------------- 156 (349)
Q Consensus 149 -----g~i~iwd~------------------------------------------------------------------- 156 (349)
..+.+|++
T Consensus 298 ~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~ 377 (902)
T 2oaj_A 298 SRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIE 377 (902)
T ss_dssp TTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEE
T ss_pred CCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEE
Confidence 25666663
Q ss_pred ----cCcceeeee-------ccc-----------------------CCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688 157 ----ETNQVVGRV-------NSV-----------------------SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG 202 (349)
Q Consensus 157 ----~~~~~~~~~-------~~~-----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 202 (349)
.++...... ... .......+.+|...+..++|+|++ ++|++|+
T Consensus 378 ~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg---~~laSgs 454 (902)
T 2oaj_A 378 TMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG---TAFITGH 454 (902)
T ss_dssp EEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE---EEEEEEE
T ss_pred EEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC---cEEEEec
Confidence 111110000 000 000001123444455566777888 8999999
Q ss_pred CCCcEEEEECCCCCcee--eeee-------CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-----------
Q psy17688 203 AEGSVRMFDLRHLEHST--IIYE-------DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC----------- 262 (349)
Q Consensus 203 ~d~~v~iwd~~~~~~~~--~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~----------- 262 (349)
.|++|++||+.++.... .+.. ..+...|.+++|+| ++++||+|+.|+ +|++||+....
T Consensus 455 ~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~Dg-tV~lwd~~~~~~~~~~~~~~~~ 532 (902)
T 2oaj_A 455 SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETG-DVVLFKYEVNQFYSVENRPESG 532 (902)
T ss_dssp TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTS-CEEEEEEEECCC----------
T ss_pred CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCc-EEEEEEecCccccCccccCCCc
Confidence 99999999998864211 1110 15678899999999 999999999999 69999997531
Q ss_pred ---------------------------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688 263 ---------------------------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI 309 (349)
Q Consensus 263 ---------------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~ 309 (349)
+++..+.+|.+.|++++|+|+| + ||+|+.|++|++||++...
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~-lAsgs~D~tv~lwd~~~~~--- 607 (902)
T 2oaj_A 533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F-VGIAYAAGSLMLIDRRGPA--- 607 (902)
T ss_dssp -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E-EEEEETTSEEEEEETTTTE---
T ss_pred ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E-EEEEeCCCcEEEEECCCCe---
Confidence 2367788899999999999999 7 9999999999999986621
Q ss_pred CCcEE-----EE-eccCCceEEEEEc-----CCC---CceEEEEcCCeEEEeeC
Q psy17688 310 EDPIL-----AY-TAAGGEINQIQWG-----ATQ---PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 310 ~~~~~-----~~-~~~~~~v~~~~~~-----~~~---~~l~~~~~d~~v~vw~v 349 (349)
.+. .+ .+|.+.|++++|+ ||| .+|++++.|++|++|++
T Consensus 608 --~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 608 --IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp --EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred --EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 111 12 2788899999999 885 78999999999999985
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.4e-36 Score=274.57 Aligned_cols=245 Identities=15% Similarity=0.282 Sum_probs=202.9
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcCceeEEEecCCCCCeEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCAPLTSFDWNEVDPNLLGT 144 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (349)
..+|.+.|++++|+|++.. +|++|+ | +|++|++....... ...+.+ |...|.+++|+| ++++|++
T Consensus 378 l~~H~~~V~~v~~~~~~~~----~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~s~-~g~~l~s 447 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNAD----IIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-----HSHFVEDVVLSS-DGQFALS 447 (694)
T ss_dssp EECCSSCEEEEECCTTCCS----EEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-----CSSCEEEEEECT-TSSEEEE
T ss_pred cccCCceeEEEEecCCCCC----EEEEEeCCCcEEEEEccCCCcccccccceecC-----CCCcEEEEEECC-CCCEEEE
Confidence 4489999999999998643 888888 6 99999998653221 123334 447899999998 9999999
Q ss_pred EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-e
Q psy17688 145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-E 223 (349)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~ 223 (349)
|+.||.|++||+.+++.. ..+.+|...|.+++|+|++ +.|++++.|++|++||+.......... .
T Consensus 448 gs~Dg~v~vwd~~~~~~~-----------~~~~~h~~~v~~~~~s~~~---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 513 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGVST-----------RRFVGHTKDVLSVAFSLDN---RQIVSASRDRTIKLWNTLGECKYTISEGG 513 (694)
T ss_dssp EETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---SCEEEEETTSCEEEECTTSCEEEEECSST
T ss_pred EeCCCcEEEEECCCCcce-----------eEEeCCCCCEEEEEEeCCC---CEEEEEeCCCEEEEEECCCCcceeeccCC
Confidence 999999999999998877 6788999999999999999 899999999999999987643222211 1
Q ss_pred CCCCCceeEEEEeCCCC--CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688 224 DPQHTPLLRLAWNKQDP--NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 224 ~~~~~~v~~~~~~~~~~--~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd 301 (349)
..|...|.+++|+| ++ ..+++++.|+ .|++||++. .+....+.+|.+.|++++|+|++++ |++++.||.|++||
T Consensus 514 ~~h~~~v~~~~~~~-~~~~~~l~s~s~d~-~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~-l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 514 EGHRDWVSCVRFSP-NTLQPTIVSASWDK-TVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSL-CASGGKDGVVLLWD 589 (694)
T ss_dssp TSCSSCEEEEEECS-CSSSCEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSBCEEEE
T ss_pred CCCCCcEEEEEEeC-CCCcceEEEEeCCC-eEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEE
Confidence 34677899999999 54 6899999999 599999997 7888889999999999999999998 99999999999999
Q ss_pred eecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 302 IQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+++. .++..+.. ...|.+++|+|++. +++++.++.|++|++
T Consensus 590 ~~~~-----~~~~~~~~-~~~v~~~~~sp~~~-~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 590 LAEG-----KKLYSLEA-NSVIHALCFSPNRY-WLCAATEHGIKIWDL 630 (694)
T ss_dssp TTTT-----EEEECCBC-SSCEEEEEECSSSS-EEEEEETTEEEEEET
T ss_pred CCCC-----ceEEEecC-CCcEEEEEEcCCCc-EEEEEcCCCEEEEEC
Confidence 9873 23444444 66899999999986 666677888999985
No 81
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.8e-35 Score=254.94 Aligned_cols=273 Identities=15% Similarity=0.277 Sum_probs=221.0
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.+|++++| ++++ |++|+. +|.|++|++.. ++... ...+|...|.+++| +++ +|++|+ | .
T Consensus 134 ~~v~~~~~----d~~~-l~~g~~----dg~i~iwd~~~--~~~~~-~~~~h~~~v~~l~~--~~~-----~l~sg~~dg~ 194 (435)
T 1p22_A 134 KGVYCLQY----DDQK-IVSGLR----DNTIKIWDKNT--LECKR-ILTGHTGSVLCLQY--DER-----VIITGSSDST 194 (435)
T ss_dssp CCEEEEEC----CSSE-EEEEES----SSCEEEEESSS--CCEEE-EECCCSSCEEEEEC--CSS-----EEEEEETTSC
T ss_pred CcEEEEEE----CCCE-EEEEeC----CCeEEEEeCCC--CeEEE-EEcCCCCcEEEEEE--CCC-----EEEEEcCCCe
Confidence 56888774 6775 999998 99999998853 33332 24479999999999 555 788777 5 9
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|++||+.+++. ...+.. |...|.+++|+ ++.+++|+.||.|++||+.++.... ....+.+|.
T Consensus 195 i~vwd~~~~~~--~~~~~~-----h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~--------~~~~~~~~~ 256 (435)
T 1p22_A 195 VRVWDVNTGEM--LNTLIH-----HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDIT--------LRRVLVGHR 256 (435)
T ss_dssp EEEEESSSCCE--EEEECC-----CCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCE--------EEEEECCCS
T ss_pred EEEEECCCCcE--EEEEcC-----CCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCce--------eeeEecCCC
Confidence 99999988753 223333 34789999996 3599999999999999998876541 124567899
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~ 260 (349)
..|.+++| ++ +++++++.||.|++||+++++....+. .+...+.+++|+ +.++++|+.|+ .|++||+++
T Consensus 257 ~~v~~~~~--~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~---~~~l~~g~~dg-~i~iwd~~~ 325 (435)
T 1p22_A 257 AAVNVVDF--DD---KYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGIACLQYR---DRLVVSGSSDN-TIRLWDIEC 325 (435)
T ss_dssp SCEEEEEE--ET---TEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEEE---TTEEEEEETTS-CEEEEETTT
T ss_pred CcEEEEEe--CC---CEEEEEeCCCeEEEEECCcCcEEEEEc--CCCCcEEEEEeC---CCEEEEEeCCC-eEEEEECCC
Confidence 99999999 45 799999999999999999987655543 477889999985 57999999999 599999998
Q ss_pred CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688 261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGGEINQIQWGATQPDWI 336 (349)
Q Consensus 261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~ 336 (349)
++++..+.+|...|.+++| ++.+ |++|+.||.|++||++...... ..++..+.+|.+.|.+++| ++..|+
T Consensus 326 -~~~~~~~~~h~~~v~~~~~--~~~~-l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~ 399 (435)
T 1p22_A 326 -GACLRVLEGHEELVRCIRF--DNKR-IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV 399 (435)
T ss_dssp -CCEEEEECCCSSCEEEEEC--CSSE-EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE
T ss_pred -CCEEEEEeCCcCcEEEEEe--cCCE-EEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE
Confidence 8889999999999999999 5776 9999999999999998754221 1157788899999999999 667799
Q ss_pred EEEcCCeEEEeeC
Q psy17688 337 AICYNKYLEVLRV 349 (349)
Q Consensus 337 ~~~~d~~v~vw~v 349 (349)
+++.||.|++|++
T Consensus 400 s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 400 SSSHDDTILIWDF 412 (435)
T ss_dssp ECCSSSEEEEEC-
T ss_pred EEeCCCEEEEEEC
Confidence 9999999999985
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=281.15 Aligned_cols=255 Identities=15% Similarity=0.249 Sum_probs=209.3
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTS 145 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~ 145 (349)
..+|.+.|++++|+|+++ +|++|+ | .|+||++..+.......+..| ..+|++++|+| + +++|++|
T Consensus 5 l~gH~~~V~~l~~s~dg~-----~latg~~dg~I~vwd~~~~~~~~~~~l~~h-----~~~V~~l~~s~-~~~~~~l~s~ 73 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAH-PKFGTILASC 73 (753)
T ss_dssp ---CCCCEEEECCCSSSC-----CEEEEETTTEEEEEEEETTEEEEEEEECCC-----SSCEEEEEECC-TTSCSEEEEE
T ss_pred cccCcceeEEEEECCCCC-----eEEEEECCCcEEEEecCCCCCccceeccCC-----cCceEEEEecC-CCCCCEEEEE
Confidence 347999999999999998 777776 5 999999985543334444444 48999999987 5 8999999
Q ss_pred EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
+.||.|++||+.+++.. ....+.+|...|.+++|+|+ + ..+++++.||.|++||++++........
T Consensus 74 s~Dg~I~vwd~~~~~~~---------~~~~~~~h~~~V~~v~~sp~~~~---~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 74 SYDGKVLIWKEENGRWS---------QIAVHAVHSASVNSVQWAPHEYG---PLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp ETTSCEEEEEEETTEEE---------EEEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred eCCCeEEEEECCCCccc---------ccccccCCCCCeEEEEECCCCCC---CEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 99999999999987632 11567889999999999999 7 8999999999999999998754444444
Q ss_pred CCCCCceeEEEEeCC------------CCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeC---CC
Q psy17688 224 DPQHTPLLRLAWNKQ------------DPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPH---SS 285 (349)
Q Consensus 224 ~~~~~~v~~~~~~~~------------~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~---~~ 285 (349)
..+...|.+++|+|. ++.++++|+.|| .|++||++... .+...+.+|...|++++|+|+ +.
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 567889999999994 489999999999 59999998733 455677889999999999999 77
Q ss_pred CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+ |++++.||.|++||++...............|...|++++|+|+++++++++.||.|++|++
T Consensus 221 ~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 221 Y-LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp E-EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred E-EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 7 99999999999999998643322233334557889999999999999999999999999985
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.3e-35 Score=246.29 Aligned_cols=261 Identities=15% Similarity=0.292 Sum_probs=206.9
Q ss_pred EEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcC
Q psy17688 53 VQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCA 127 (349)
Q Consensus 53 i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~ 127 (349)
+.++....++..+.. ...+|.+.|++|+|+|++.. +|++|+ | +|+|||+...+... ...+. +|..
T Consensus 18 ~~~~~~~~~~~~l~~-tL~GH~~~V~~v~~sp~~~~----~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-----~h~~ 87 (340)
T 4aow_A 18 LYFQSMMTEQMTLRG-TLKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALR-----GHSH 87 (340)
T ss_dssp --------CEEEEEE-EECCCSSCEEEEEECTTCTT----EEEEEETTSCEEEEEECCSSSCSEEEEEEEC-----CCSS
T ss_pred EEEEEccCCceEEEE-EECCccCCEEEEEEeCCCCC----EEEEEcCCCeEEEEECCCCCcccceeeEEEe-----CCCC
Confidence 444444433333322 24589999999999998532 899888 6 99999998754321 12233 3448
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV 207 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v 207 (349)
.|.+++|+| ++++|++|+.|+.|++|+....... .....+...+....+++.+ ..|++++.|+.+
T Consensus 88 ~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~l~s~s~d~~~ 152 (340)
T 4aow_A 88 FVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTT-----------RRFVGHTKDVLSVAFSSDN---RQIVSGSRDKTI 152 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---SCEEEEETTSCE
T ss_pred CEEEEEECC-CCCEEEEEcccccceEEeeccccee-----------eeecCCCCceeEEEEeecC---ccceeecCCCeE
Confidence 999999998 9999999999999999999988776 4566778889999999998 899999999999
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCC-CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD-PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
++||+...... ......+...+..++|++.. ..++++++.|+ .|++||++. .+.+..+.+|.+.|++++|+|++++
T Consensus 153 ~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~-~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 153 KLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK-LVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp EEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEeCCCceE-EEEeccccCcccceEEccCCCCcEEEEEcCCC-EEEEEECCC-CceeeEecCCCCcEEEEEECCCCCE
Confidence 99999875433 33334577889999999843 35678899999 599999997 8888999999999999999999998
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++|+.|+.|++||++. ..++..+.. ...|..+.|+|++ .+++++.|+.|++|++
T Consensus 230 -l~s~s~Dg~i~iwd~~~-----~~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 230 -CASGGKDGQAMLWDLNE-----GKHLYTLDG-GDIINALCFSPNR-YWLCAATGPSIKIWDL 284 (340)
T ss_dssp -EEEEETTCEEEEEETTT-----TEEEEEEEC-SSCEEEEEECSSS-SEEEEEETTEEEEEET
T ss_pred -EEEEeCCCeEEEEEecc-----CceeeeecC-CceEEeeecCCCC-ceeeccCCCEEEEEEC
Confidence 99999999999999987 344566665 6789999999987 4888889999999985
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.3e-35 Score=267.46 Aligned_cols=281 Identities=13% Similarity=0.211 Sum_probs=227.4
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc-cccceEecCCCC-eeEEEEec--CCCCCCCcEEEEe
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE-FGPKSTIDHPYP-TTKIMWIP--DRKGVFPDLLATS 97 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~l~~~ 97 (349)
...|.+++|+| +|++ ||+++ ++.|.||+++..... .......+|... |++++|+| +++ +|+++
T Consensus 18 ~~~v~~~~~sp--dg~~-l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-----~l~s~ 84 (615)
T 1pgu_A 18 RNFTTHLSYDP--TTNA-IAYPC-----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-----YLCSG 84 (615)
T ss_dssp TTCCCCCEEET--TTTE-EEEEE-----TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-----EEEEE
T ss_pred cCceeEEEECC--CCCE-EEEec-----CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC-----EEEEe
Confidence 37899999999 9995 88875 689999998733111 122234579999 99999999 988 88888
Q ss_pred C-C-cEEEEECCCC------CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeeee
Q psy17688 98 G-D-YLRVWRAGEP------ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGRV 165 (349)
Q Consensus 98 ~-~-~i~vw~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~ 165 (349)
+ | .|++|++.++ .......+..+ ..+|.+++|+| ++++|++++.+ +.|.+|| .++..
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~--- 153 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVL-----AGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSL--- 153 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-----SSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEE---
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcc-----cccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcc---
Confidence 7 5 9999999754 22222333333 37899999998 99999999988 6899998 44444
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC---ceeEEEEeCCC-CC
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT---PLLRLAWNKQD-PN 241 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~ 241 (349)
..+.+|...|.+++|+|++. ..+++++.|+.|++||+++.+....+. .+.. .|.+++|+| + +.
T Consensus 154 --------~~~~~~~~~v~~~~~~~~~~--~~l~~~~~d~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~ 220 (615)
T 1pgu_A 154 --------GEVSGHSQRINACHLKQSRP--MRSMTVGDDGSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSP-DSGE 220 (615)
T ss_dssp --------EECCSCSSCEEEEEECSSSS--CEEEEEETTTEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECS-TTCC
T ss_pred --------eeeecCCccEEEEEECCCCC--cEEEEEeCCCcEEEEeCCCcceeeeec--ccCCCCceEEEEEECC-CCCC
Confidence 56788999999999999982 389999999999999998876544432 4556 899999999 7 99
Q ss_pred eEEEEeeCCcEEEEEeccCCCcceeEe-e---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688 242 YLAMVAMNACEVIILDVRVPCTPVARL-N---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT 317 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~-~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 317 (349)
+|++++.|+ .|++||+++ ++.+..+ . .|...|.+++|+ ++.+ |++++.|+.|++||+++ .+.+..+.
T Consensus 221 ~l~~~~~dg-~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~i~~wd~~~-----~~~~~~~~ 291 (615)
T 1pgu_A 221 FVITVGSDR-KISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQK-FATVGADATIRVWDVTT-----SKCVQKWT 291 (615)
T ss_dssp EEEEEETTC-CEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSSE-EEEEETTSEEEEEETTT-----TEEEEEEE
T ss_pred EEEEEeCCC-eEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCCE-EEEEcCCCcEEEEECCC-----CcEEEEEc
Confidence 999999999 599999987 7778888 6 899999999999 8887 99999999999999987 33456666
Q ss_pred cc----CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 318 AA----GGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 318 ~~----~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.+ ...+.++.|. ++..+++++.|+.|++|++
T Consensus 292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 65 3678888886 7778999999999999985
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-35 Score=255.58 Aligned_cols=247 Identities=11% Similarity=0.134 Sum_probs=203.0
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC----chhheeccCCCCCCCcCceeEEEecCCC----C-
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE----TRLECILNNNKNSDFCAPLTSFDWNEVD----P- 139 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~- 139 (349)
.+|...|++++|+| + +|++++ | .|++|++.+.+ ......+.. |..+|.+++|+| + +
T Consensus 13 ~~h~~~i~~~~~~~--~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~~~g~ 79 (397)
T 1sq9_A 13 KAHDADIFSVSACN--S-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-----HKSGLHHVDVLQ-AIERDAF 79 (397)
T ss_dssp SCSSSCEEEEEECS--S-----EEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-----CTTCEEEEEEEE-EEETTTE
T ss_pred hhhhcCeEEEEecC--C-----eEEEEcCCCEEEEEECCCcccccCCCcceEEec-----CCCcEEEEEEec-ccccCCc
Confidence 37999999999999 3 777776 6 99999998765 122233333 347899999998 7 8
Q ss_pred --CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc-----CCceeeEEEe----cCCCCccE-EEEEcCCCcE
Q psy17688 140 --NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH-----DKEVYDIAFS----RAGGGRDM-FASVGAEGSV 207 (349)
Q Consensus 140 --~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~~~~-l~~~~~d~~v 207 (349)
.+|++++.||.|++||+.+++... ......+..| ...|.+++|+ |++ +. |++++.||.|
T Consensus 80 ~~~~l~s~~~dg~i~iw~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~l~~~~~dg~i 150 (397)
T 1sq9_A 80 ELCLVATTSFSGDLLFYRITREDETK------KVIFEKLDLLDSDMKKHSFWALKWGASNDRLL---SHRLVATDVKGTT 150 (397)
T ss_dssp EEEEEEEEETTSCEEEEEEEECTTTC------CEEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCE
T ss_pred cccEEEEEcCCCCEEEEEccCCcccc------cccceeecccccccCCCcEEEEEEeeccCCCC---ceEEEEEeCCCcE
Confidence 899999999999999999877510 0001566777 5899999999 988 78 9999999999
Q ss_pred EEEECCC------CCcee-----eeee-----CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-
Q psy17688 208 RMFDLRH------LEHST-----IIYE-----DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN- 270 (349)
Q Consensus 208 ~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~- 270 (349)
++||++. .+... .+.. ..+...+.+++|+| ++ +|++++.|+ .|++||++. .+++..+..
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~ 226 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNG-TVQISELST-LRPLYNFESQ 226 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTS-EEEEEETTT-TEEEEEEECC
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCC-cEEEEECCC-CceeEEEecc
Confidence 9999998 55443 3332 45678899999999 77 999999999 699999997 788888988
Q ss_pred --C---CcceEEEEEeeCCCCEEEEEcCC---CcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEc
Q psy17688 271 --H---RACVNGIAWAPHSSCHICTAGDD---HQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWG 329 (349)
Q Consensus 271 --~---~~~v~~~~~~p~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~ 329 (349)
| ...|.+++|+|++.+ |++++.| +.|++||++. ..++..+.. |...|.+++|+
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~-l~~~~~d~~~g~i~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSL-LAIAHDSNSFGCITLYETEF-----GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp C---CCCCCEEEEEECSSTTE-EEEEEEETTEEEEEEEETTT-----CCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred ccccccCCccceEEECCCCCE-EEEEecCCCCceEEEEECCC-----CcccceeccCcccccccccccccCCcEEEEEEC
Confidence 8 999999999999998 9999999 9999999987 446777887 89999999999
Q ss_pred CCCCceEEEEcCCeEEEeeC
Q psy17688 330 ATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 330 ~~~~~l~~~~~d~~v~vw~v 349 (349)
|++++|++++.|+.|++|++
T Consensus 301 ~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 301 DSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp SSSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEeCCCeEEEEEc
Confidence 99999999999999999985
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-34 Score=252.13 Aligned_cols=268 Identities=17% Similarity=0.310 Sum_probs=205.7
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc------ccc-ccceEecCCCCeeEEEEecCCC
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI------SEF-GPKSTIDHPYPTTKIMWIPDRK 87 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~------~~~-~~~~~~~~~~~v~~~~~~~~~~ 87 (349)
....+.+..+|++++|+| ++...||+|+. +|.|++|++.... +.. ......+|...|++++|+|++.
T Consensus 121 ~~~~~~h~~~v~~l~~~p--~~~~~lat~~~----dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMP--QNACVIATKTP----SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp EEEEEEESSCCSEEEEET--TEEEEEEEECS----SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST
T ss_pred EEEEEcCCCcEEEEEECC--CCCcEEEEECC----CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC
Confidence 345566668999999998 63324999988 9999999997520 111 2223447999999999999986
Q ss_pred CCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688 88 GVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV 165 (349)
Q Consensus 88 ~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 165 (349)
. +|++|+ | .|++|++..................|...|.+++|+|.++.+|++++.||.|++||++++...
T Consensus 195 ~----~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--- 267 (430)
T 2xyi_A 195 G----YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--- 267 (430)
T ss_dssp T----EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS---
T ss_pred C----eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC---
Confidence 5 677776 5 999999987432211111111122345789999999877889999999999999999987321
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM 245 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 245 (349)
.....+..|...|.+++|+|++. .++++|+.||.|++||++......... ..+...|.+++|+|.+..+|++
T Consensus 268 -----~~~~~~~~~~~~v~~i~~~p~~~--~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 268 -----KPSHTVDAHTAEVNCLSFNPYSE--FILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp -----SCSEEEECCSSCEEEEEECSSCT--TEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEE
T ss_pred -----cceeEeecCCCCeEEEEeCCCCC--CEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEE
Confidence 11256678999999999999883 479999999999999999854322222 2477899999999944468999
Q ss_pred EeeCCcEEEEEeccCCC-------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 246 VAMNACEVIILDVRVPC-------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 246 ~~~d~~~i~v~d~~~~~-------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
++.|+ .|++||++..+ ..+..+.+|...|++++|+|+++.+|++++.||.|++|++..
T Consensus 340 ~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 340 SGTDR-RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EETTS-CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EeCCC-cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 99999 59999998622 456667789999999999999996699999999999999976
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-35 Score=253.63 Aligned_cols=253 Identities=13% Similarity=0.189 Sum_probs=205.2
Q ss_pred ecCCCCeeEEEEecC---CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC----CCeE
Q psy17688 71 IDHPYPTTKIMWIPD---RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD----PNLL 142 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l 142 (349)
.+|..+|++++|+|+ +.. .+++++++ .|++|++.+.+. ...+..+....+...|++++|+| + +.+|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~---~~~~~~~~~~v~vw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l 88 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDP---LVFATVGSNRVTLYECHSQGE--IRLLQSYVDADADENFYTCAWTY-DSNTSHPLL 88 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSC---EEEEEEETTEEEEEEECGGGC--EEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEE
T ss_pred cCCCCceEEEEEecccCCCCc---eEEEECCCCEEEEEEcCCCcE--EEeeeeccccCCCCcEEEEEecc-CCCCCCCEE
Confidence 379999999999985 332 26666666 999999986542 22333344344567899999998 5 5699
Q ss_pred EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688 143 GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTII 221 (349)
Q Consensus 143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 221 (349)
++|+.||.|++||+.+++.. ..+.+|...|.+++|+| ++ ++|++++.||.|++||+++++....+
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCI-----------KHYVGHGNAINELKFHPRDP---NLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEETTCEEEEECTTTCCEE-----------EEEESCCSCEEEEEECSSCT---TEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEecCCCEEEEEEchhceEe-----------eeecCCCCcEEEEEECCCCC---CEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 99999999999999988877 56788999999999999 77 89999999999999999987654443
Q ss_pred ee-CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe----------------------------ecCC
Q psy17688 222 YE-DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL----------------------------NNHR 272 (349)
Q Consensus 222 ~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~----------------------------~~~~ 272 (349)
.. ..+...|.+++|+| ++.+|++++.|+ .|++||++. .+....+ ..|.
T Consensus 155 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDL-LGEKIMSCGMDH-SLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR 231 (366)
T ss_dssp CSTTSCSSCEEEEEECT-TSSEEEEEETTS-CEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS
T ss_pred cccccccCceeEEEECC-CCCEEEEecCCC-CEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCc
Confidence 21 35778999999999 999999999999 599999986 4433333 2389
Q ss_pred cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC---------CCCcEEEEeccCCceEEEEEcCC--CCceEEEEcC
Q psy17688 273 ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA---------IEDPILAYTAAGGEINQIQWGAT--QPDWIAICYN 341 (349)
Q Consensus 273 ~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d 341 (349)
..|.+++|+ +.+ |++++.|+.|++||++..... ....+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 232 ~~v~~~~~~--~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 232 NYVDCVRWL--GDL-ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp SCCCEEEEE--TTE-EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred ceEEEEEEc--CCE-EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 999999999 666 999999999999999875431 01236678888999999999999 9989999999
Q ss_pred CeEEEeeC
Q psy17688 342 KYLEVLRV 349 (349)
Q Consensus 342 ~~v~vw~v 349 (349)
+.|++|++
T Consensus 309 g~i~vwd~ 316 (366)
T 3k26_A 309 GKLYVWDL 316 (366)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEC
Confidence 99999985
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=257.05 Aligned_cols=267 Identities=11% Similarity=0.051 Sum_probs=202.2
Q ss_pred eeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688 16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA 95 (349)
Q Consensus 16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 95 (349)
+-+-+....|.+++||| ||++ +|+++. |++|+ + ...++.. .+|...|++++|+|++.
T Consensus 9 ~~~~~~~~~v~sv~~Sp--DG~~-iASas~----D~TV~--d--~~~~~~l----~gh~~~v~~V~FsPdg~-------- 65 (588)
T 2j04_A 9 VDRKEFEDWKNNLTWAR--DGTL-YLTTFP----DISIG--Q--PKYAKDI----NCNSKNLFHVKEFPLEF-------- 65 (588)
T ss_dssp ECSCCCSSSSCCEEECT--TSCE-EEECSS----SEEEE--E--ECCCSCC----SSBGGGTEEEEEECCCC--------
T ss_pred ccHhHhhccEEEEEECC--CCCE-EEEEcC----Cceee--c--cccccee----cCCCccEEEEEECCCCC--------
Confidence 33444457899999999 9996 999988 99999 4 2223222 37999999999999982
Q ss_pred EeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeee
Q psy17688 96 TSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ 175 (349)
Q Consensus 96 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 175 (349)
.+.+.+|+.+.. . .+.. .+...|.+++|+| ++..||+++.||.|++||... .+ ..
T Consensus 66 --~~~~~~~~~~~~---~--~~~~----~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l-----------~~ 120 (588)
T 2j04_A 66 --ENKLDFELAQQN---G--LLNS----QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--ML-----------TN 120 (588)
T ss_dssp --CCTTTTSCCCSS---C--SSTT----SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EE-----------EE
T ss_pred --cceEEEEeCCCc---e--Eeec----CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--ee-----------ee
Confidence 124444443221 1 1111 1137899999998 999999999999999999544 33 34
Q ss_pred eeccCC-----ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-------eeeee--eCCCCCceeEEEEeCCCCC
Q psy17688 176 LIAHDK-----EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-------STIIY--EDPQHTPLLRLAWNKQDPN 241 (349)
Q Consensus 176 ~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~ 241 (349)
+. |.. .+.+++|+|++ ++|++|+.||+|++||+.++.. ...+. ...|...|.+++|+| ++
T Consensus 121 l~-~~~~~~~~sv~svafSPDG---~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg- 194 (588)
T 2j04_A 121 LD-SKGNLSSRTYHCFEWNPIE---SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV- 194 (588)
T ss_dssp CC-CSSCSTTTCEEEEEECSSS---SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE-
T ss_pred cc-CCCccccccEEEEEEcCCC---CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc-
Confidence 45 554 49999999999 8999999999999999998653 12221 134668999999999 77
Q ss_pred eEEEEeeCCcEEEEEeccCCCc---ceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688 242 YLAMVAMNACEVIILDVRVPCT---PVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT 317 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~~~---~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 317 (349)
+++++.|+ .|++||+.. +. ...++ .+|+..|.+++|+ +.. |++++ ++.|++||+... .......
T Consensus 195 -Laass~D~-tVrlWd~~~-~~~~~~~~tL~~~h~~~V~svaFs--g~~-LASa~-~~tIkLWd~~~~-----~~~~~~~ 262 (588)
T 2j04_A 195 -LVAALSNN-SVFSMTVSA-SSHQPVSRMIQNASRRKITDLKIV--DYK-VVLTC-PGYVHKIDLKNY-----SISSLKT 262 (588)
T ss_dssp -EEEEETTC-CEEEECCCS-SSSCCCEEEEECCCSSCCCCEEEE--TTE-EEEEC-SSEEEEEETTTT-----EEEEEEC
T ss_pred -EEEEeCCC-eEEEEECCC-CccccceeeecccccCcEEEEEEE--CCE-EEEEe-CCeEEEEECCCC-----eEEEEEc
Confidence 88888899 599999986 33 23456 4788999999999 565 88887 699999999873 2222233
Q ss_pred ccCCceEEEEE--cCCCCceEEEEcCCeEEEeeC
Q psy17688 318 AAGGEINQIQW--GATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 318 ~~~~~v~~~~~--~~~~~~l~~~~~d~~v~vw~v 349 (349)
+|...|.+++| +|++..++++..||+ ++|..
T Consensus 263 gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 263 GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 79999999999 999987787887999 99963
No 89
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=250.33 Aligned_cols=245 Identities=7% Similarity=0.010 Sum_probs=189.3
Q ss_pred CCCCeeEEEEecCCCCCCCcEE-EEeC-C-cEEEEECC--CCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLL-ATSG-D-YLRVWRAG--EPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l-~~~~-~-~i~vw~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
|...|.+++|+|+++ +| ++++ | .|++|++. ++.. ...+..+ .+...|++++|+| ++.+|++|+.
T Consensus 101 ~~~~v~~~~~s~d~~-----~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~~---~~~~~v~~~~~sp-~~~~l~~~~~ 169 (450)
T 2vdu_B 101 IYSYIRNLRLTSDES-----RLIACADSDKSLLVFDVDKTSKNV--LKLRKRF---CFSKRPNAISIAE-DDTTVIIADK 169 (450)
T ss_dssp CCCCEEEEEECTTSS-----EEEEEEGGGTEEEEEEECSSSSSC--EEEEEEE---ECSSCEEEEEECT-TSSEEEEEET
T ss_pred cCCceEEEEEcCCCC-----EEEEEECCCCeEEEEECcCCCCce--eeeeecc---cCCCCceEEEEcC-CCCEEEEEeC
Confidence 344799999999998 64 7776 5 99999998 5432 2222211 1236899999998 9999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC---CCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA---GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED 224 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 224 (349)
+|.|++|++.+++... .....+.+|...|.+++|+|+ + ++|++++.|+.|++||+++++...... .
T Consensus 170 ~g~v~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~sp~~~~~---~~l~s~~~d~~i~vwd~~~~~~~~~~~-~ 238 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEK-------FTQEPILGHVSMLTDVHLIKDSDGH---QFIITSDRDEHIKISHYPQCFIVDKWL-F 238 (450)
T ss_dssp TSEEEEEETTSCCCSS-------CCCCCSEECSSCEEEEEEEECTTSC---EEEEEEETTSCEEEEEESCTTCEEEEC-C
T ss_pred CCcEEEEecCCccccc-------ccceeeecccCceEEEEEcCCCCCC---cEEEEEcCCCcEEEEECCCCceeeeee-c
Confidence 9999999998876541 012366789999999999999 7 899999999999999999876554432 3
Q ss_pred CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-------------------------CCcceEEEE
Q psy17688 225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-------------------------HRACVNGIA 279 (349)
Q Consensus 225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-------------------------~~~~v~~~~ 279 (349)
.+...|.+++|+ ++.+|++++.|+ .|++||+++ ++.+..+.. ....|.++.
T Consensus 239 ~h~~~v~~~~~s--d~~~l~s~~~d~-~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 239 GHKHFVSSICCG--KDYLLLSAGGDD-KIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp CCSSCEEEEEEC--STTEEEEEESSS-EEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred CCCCceEEEEEC--CCCEEEEEeCCC-eEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 577899999999 899999999999 699999997 676666652 235789999
Q ss_pred EeeCCCCEEEEEc-CCCcEEEEEe--ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-------CCeEEEee
Q psy17688 280 WAPHSSCHICTAG-DDHQALIWDI--QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-------NKYLEVLR 348 (349)
Q Consensus 280 ~~p~~~~~l~~~~-~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~v~vw~ 348 (349)
|+|++++ |++++ .|+.|++||+ ..... ...+..+..| +.|.+++|+|++ .+++.+. +..|.+|.
T Consensus 315 ~~~~~~~-l~~~~~~d~~i~iw~~~~~~~~~--l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 315 KSKNLPF-VAFFVEATKCIIILEMSEKQKGD--LALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp ECSSSSE-EEEEETTCSEEEEEEECSSSTTC--EEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEE
T ss_pred EeCCCCE-EEEEECCCCeEEEEEeccCCCCc--eeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEE
Confidence 9999998 66666 8999999999 33111 1345667776 889999999964 4444433 34577775
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.6e-36 Score=291.99 Aligned_cols=277 Identities=18% Similarity=0.269 Sum_probs=232.5
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D 99 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~ 99 (349)
...++.+++|+| ++++ +++|+. +|.|.+|++... ... ....+|...|.+++|+|+++ ++++++ |
T Consensus 960 ~~~~i~~~~~sp--~g~~-l~~g~~----~g~i~i~d~~~~--~~~-~~~~~h~~~v~~l~~s~dg~-----~l~s~~~d 1024 (1249)
T 3sfz_A 960 PEAQVSCCCLSP--HLEY-VAFGDE----DGAIKIIELPNN--RVF-SSGVGHKKAVRHIQFTADGK-----TLISSSED 1024 (1249)
T ss_dssp CCSCEEEEEECT--TSSE-EEEEET----TSCCEEEETTTT--SCE-EECCCCSSCCCCEEECSSSS-----CEEEECSS
T ss_pred ccCcEEEEEEcC--CCCE-EEEEcC----CCCEEEEEcCCC--cee-eecccCCCceEEEEECCCCC-----EEEEEcCC
Confidence 346799999999 9996 999988 999999988643 322 22347999999999999998 777777 5
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++|++.++... ... .+...|.++.|+| +..+++++.||.|++||+.+++.. ..+.+
T Consensus 1025 g~i~vwd~~~~~~~---~~~-----~~~~~v~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~~~-----------~~~~~ 1083 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYV---FLQ-----AHQETVKDFRLLQ--DSRLLSWSFDGTVKVWNVITGRIE-----------RDFTC 1083 (1249)
T ss_dssp SBEEEEETTTTEEE---CCB-----CCSSCEEEEEECS--SSEEEEEESSSEEEEEETTTTCCC-----------EEEEC
T ss_pred CEEEEEECCCCceE---EEe-----cCCCcEEEEEEcC--CCcEEEEECCCcEEEEECCCCcee-----------EEEcc
Confidence 9999999886422 222 3347899999987 457889999999999999998877 67889
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
|...|.+++|+|++ +++++++.|+.|++||+.+++....+ ..|...|.+++|+| ++.+|++++.|| .|++||+
T Consensus 1084 ~~~~v~~~~~s~d~---~~l~s~s~d~~v~iwd~~~~~~~~~l--~~h~~~v~~~~~s~-dg~~lat~~~dg-~i~vwd~ 1156 (1249)
T 3sfz_A 1084 HQGTVLSCAISSDA---TKFSSTSADKTAKIWSFDLLSPLHEL--KGHNGCVRCSAFSL-DGILLATGDDNG-EIRIWNV 1156 (1249)
T ss_dssp CSSCCCCEEECSSS---SSCEEECCSSCCCEECSSSSSCSBCC--CCCSSCEEEEEECS-SSSEEEEEETTS-CCCEEES
T ss_pred cCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCcceeeee--ccCCCcEEEEEECC-CCCEEEEEeCCC-EEEEEEC
Confidence 99999999999999 89999999999999999987755443 35778999999999 999999999999 5999999
Q ss_pred cCCCcceeEe---------ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688 259 RVPCTPVARL---------NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG 329 (349)
Q Consensus 259 ~~~~~~~~~~---------~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 329 (349)
.+ ++.+..+ ..|.+.|++++|+|++++ |++++ |.|++||+.++. .+..+..|...|.+++|+
T Consensus 1157 ~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~-l~s~~--g~v~vwd~~~g~-----~~~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A 1157 SD-GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT-LVSAG--GYLKWWNVATGD-----SSQTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp SS-SCCCCCCCCCC-------CCSCCCEEEECTTSSC-EEEES--SSEEEBCSSSCB-----CCCCCCCSSCCCCCCEEC
T ss_pred CC-CceEEEeccccccccccccCceEEEEEECCCCCE-EEECC--CeEEEEECCCCc-----eeeeeeccCCcccEEEEC
Confidence 87 6655544 578899999999999999 88875 899999998843 345667788899999999
Q ss_pred CCCCceEEEEcCCeEEEeeC
Q psy17688 330 ATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 330 ~~~~~l~~~~~d~~v~vw~v 349 (349)
|++.++++++.||.|++|++
T Consensus 1228 ~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1228 PDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp SSSCCEEEECTTCCEEEECC
T ss_pred CCCCEEEEecCCcEEEEEee
Confidence 99999999999999999986
No 91
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.9e-35 Score=250.12 Aligned_cols=306 Identities=12% Similarity=0.121 Sum_probs=201.2
Q ss_pred eeeeecCCceeeEEEee-cCCCceEEEEEeeecccCCeEEEEecccccc------ccccceEecCCCCeeEEEEecCCCC
Q psy17688 16 IYKYEAPWPLYSMNWSV-RPDKLFRLAIGSYVEEYNNKVQIVALNEDIS------EFGPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 16 ~~~~~~~~~v~~~~~sp-~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
-+.+..+...+++.|.. .+++.. |++++. ++.|.+|....+.. .........+..++..+.|++....
T Consensus 9 ~~~lpl~~~p~~~~w~~~~~~~~~-l~a~g~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (393)
T 4gq1_A 9 QYQLPLNVRPYTTTWCSQSPSCSN-LLAIGH----DTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSY 83 (393)
T ss_dssp EEECCTTCCEEEEEECTTSGGGTT-EEEEEE----SSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEE
T ss_pred ceEecCCCCCeEEEEeCCCCCCCC-EEEEEC----CCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccc
Confidence 44455556788888853 224443 444445 78899998754321 1122223345666777776643210
Q ss_pred ---------------CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-------CCCCeEEE
Q psy17688 89 ---------------VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-------VDPNLLGT 144 (349)
Q Consensus 89 ---------------~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~l~~ 144 (349)
....+|++++ | +|+|||+..++...... .....+|...|.+++|+| .++++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~--~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las 161 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHV--LGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS 161 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEE--ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeee--ecccCCCCCceEEEEEccccccccCCCCCEEEE
Confidence 0012688887 6 99999998765322211 122345568999999986 36789999
Q ss_pred EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee---
Q psy17688 145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII--- 221 (349)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--- 221 (349)
|+.|++|+|||+.++... ..+..|..+|.+++|+|++. .+|++++.|++|++||+++++.....
T Consensus 162 ~s~D~tv~~Wd~~~~~~~-----------~~~~~~~~~v~~v~~~p~~~--~~l~~~~~d~~v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPI-----------LAGYPLSSPGISVQFRPSNP--NQLIVGERNGNIRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp EETTSEEEEEEEETTEEE-----------EEEEECSSCEEEEEEETTEE--EEEEEEETTSEEEEEETTCCC--------
T ss_pred EECCCeEEEEECCCCcee-----------eeecCCCCCcEEEEECCCCC--ceEEecCCCCEEEEEECCCCccccccccc
Confidence 999999999999887766 56678889999999999873 58999999999999999886532211
Q ss_pred --------------------eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEE--
Q psy17688 222 --------------------YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA-- 279 (349)
Q Consensus 222 --------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~-- 279 (349)
....+...+.++.|++.++..+++++.|+ .+++||+.. ++....+..|...+..+.
T Consensus 229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~-~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG-AWLRWNLFA-NNDYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp --CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS-EEEEEEC--------------------CCS
T ss_pred CCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC-CEEEEECcc-CCCCceEeeecCccccEEEc
Confidence 11235567889999855999999999999 699999986 554555544444433333
Q ss_pred ----------------Eee-CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688 280 ----------------WAP-HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK 342 (349)
Q Consensus 280 ----------------~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 342 (349)
|+| .+..++++|+.||.|++||+... .+......|..+|++++|+|+|++|++++. +
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~-----~~~~~~~~~~~~V~svafspdG~~LA~as~-~ 380 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK-----DSNSIPIQLGMPIVDFCWHQDGSHLAIATE-G 380 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT-----TCCEEEEECSSCEEEEEECTTSSEEEEEES-S
T ss_pred cccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC-----cEEEEecCCCCcEEEEEEcCCCCEEEEEeC-C
Confidence 333 23344788899999999999874 345666778899999999999997776655 5
Q ss_pred eEEEeeC
Q psy17688 343 YLEVLRV 349 (349)
Q Consensus 343 ~v~vw~v 349 (349)
.+.+|+|
T Consensus 381 Gv~lvrL 387 (393)
T 4gq1_A 381 SVLLTRL 387 (393)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 5666653
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=245.38 Aligned_cols=251 Identities=12% Similarity=0.176 Sum_probs=198.4
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeE
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLL 142 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l 142 (349)
..+|...|.+++|+|++.. ++++++ | .|++|++.+++....... . |..+|.+++|+|.. +.+|
T Consensus 14 ~~~h~~~v~~~~~~p~~~~----l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAK----FVTMGNFARGTGVIQLYEIQHGDLKLLREI-E-----KAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp EEECSSCEEEEEECTTSSE----EEEEEC--CCCEEEEEEEECSSSEEEEEEE-E-----ESSCEEEEECTTCCTTTCCE
T ss_pred ccCCCCceEEEEEcCCCce----EEEecCccCCCcEEEEEeCCCCcccceeee-c-----ccCcEEEEEEcCCCCCCceE
Confidence 4469999999999999863 666663 6 999999988653222111 2 33789999999832 6999
Q ss_pred EEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEE------ecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688 143 GTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAF------SRAGGGRDMFASVGAEGSVRMFDLRHL 215 (349)
Q Consensus 143 ~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~l~~~~~d~~v~iwd~~~~ 215 (349)
++|+.||.|++||+.+++ .. ..+.+|...|.+++| +|++ ++|++++.|+.|++||++++
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~s~~~---~~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPV-----------YSVKGHKEIINAIDGIGGLGIGEGA---PEIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCS-----------EEECCCSSCEEEEEEESGGGCC-CC---CEEEEEETTSCEEEECTTSC
T ss_pred EEecCCCeEEEEeCCCCCccE-----------EEEEecccceEEEeeccccccCCCc---cEEEEEeCCCeEEEEeCCCC
Confidence 999999999999999887 44 567899999999965 5677 79999999999999999987
Q ss_pred C-ceeeeeeC--CCCCceeEEE----EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEee---CCC
Q psy17688 216 E-HSTIIYED--PQHTPLLRLA----WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAP---HSS 285 (349)
Q Consensus 216 ~-~~~~~~~~--~~~~~v~~~~----~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p---~~~ 285 (349)
+ ....+... .....+.+++ |+| ++.++++++.|+ .|++||++. .+. .....|...|.+++|+| ++.
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~-~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~ 225 (357)
T 3i2n_A 150 DDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNG-DIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMN 225 (357)
T ss_dssp SSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTS-EEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCC
T ss_pred CCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCC-eEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCC
Confidence 6 33333221 1234788888 677 899999999999 699999987 554 44466889999999999 888
Q ss_pred CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688 286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV 349 (349)
Q Consensus 286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v 349 (349)
+ |++++.||.|++||++............+..|...|++++|+|+++ ++++++.|+.|++|++
T Consensus 226 ~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 226 K-LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp E-EEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred E-EEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence 8 9999999999999999854322212234558899999999999998 7888999999999984
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=248.22 Aligned_cols=267 Identities=14% Similarity=0.175 Sum_probs=203.9
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC----CCCCch----hheeccC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA----GEPETR----LECILNN 119 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~----~~~~~~----~~~~~~~ 119 (349)
...+.+|+++.. ........|...|++++|+|+++. +|++++ | .|++|++ .+++.. ....+..
T Consensus 24 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 1r5m_A 24 NSIDSSDDLDGF---VKILKEIVKLDNIVSSTWNPLDES----ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH 96 (425)
T ss_dssp ----------CC---CEECEEEEECSCCSEEEECSSCTT----EEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC
T ss_pred ccccccccchhh---hhheeeeeccCceEEEEECCCCCc----EEEEecCCceEEEEEEecccCCccccccccccccccc
Confidence 344556766432 223334567789999999999874 666666 5 9999999 765410 0111111
Q ss_pred CC-----CCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC
Q psy17688 120 NK-----NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG 194 (349)
Q Consensus 120 ~~-----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 194 (349)
.. ...|...|++++|+| ++++|++|+.||.|++|| .+++.. ..+..|...|.+++|+|++
T Consensus 97 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~-----------~~~~~~~~~v~~~~~~~~~-- 161 (425)
T 1r5m_A 97 PFALSASSGKTTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALL-----------NVLNFHRAPIVSVKWNKDG-- 161 (425)
T ss_dssp CCCCC------CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEE-----------EEECCCCSCEEEEEECTTS--
T ss_pred cccccccccCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCee-----------eeccCCCccEEEEEECCCC--
Confidence 11 112456999999998 999999999999999999 445554 5678899999999999999
Q ss_pred ccEEEEEcCCCcEEEEECCCCCceeee-----------------------------------------------------
Q psy17688 195 RDMFASVGAEGSVRMFDLRHLEHSTII----------------------------------------------------- 221 (349)
Q Consensus 195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~----------------------------------------------------- 221 (349)
++|++++.|+.|++||+++++....+
T Consensus 162 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~ 240 (425)
T 1r5m_A 162 -THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT 240 (425)
T ss_dssp -SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS
T ss_pred -CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee
Confidence 89999999999999999876432211
Q ss_pred -eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688 222 -YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300 (349)
Q Consensus 222 -~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw 300 (349)
....+...|.+++|+| ++.+|++++.|+ .|++||++. .+.+..+..|...|.+++|+|++ . +++++.|+.|++|
T Consensus 241 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~-~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFND-TNKLLLSASDDG-TLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-K-VISCSMDGSVRLW 315 (425)
T ss_dssp EEECCCSSCEEEEEEET-TTTEEEEEETTS-CEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-E-EEEEETTSEEEEE
T ss_pred eeeccCCCceEEEEECC-CCCEEEEEcCCC-EEEEEECCC-CccceEecCCCccEEEEEECCCC-E-EEEEeCCCcEEEE
Confidence 1123567899999999 899999999999 599999997 78888898999999999999999 5 9999999999999
Q ss_pred EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|++. ..++..+..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 316 d~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 316 SLKQ-----NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp ETTT-----TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ECCC-----CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 9987 3457778888999999999999999999999999999985
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.1e-35 Score=253.59 Aligned_cols=248 Identities=15% Similarity=0.143 Sum_probs=186.4
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID 148 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (349)
..|...|++|+|+|.... +||+|+ | .|+|||+.+.+......+.+ |...|++++|+|.++++|++|+.|
T Consensus 116 ~~~~~~V~~l~~~P~~~~----~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPS----TVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----AGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EECSSCEEEEEECSSCTT----CEEEEETTSCEEEECSSCCSCCEEECCCS-----SSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCCCCCEEEEEEeCCCCC----EEEEEeCCCEEEEEECCCCCceeEEEccC-----CCCCEEEEEEeCCCCCEEEEEeCC
Confidence 467889999999996543 888887 5 99999998765333222333 448999999998788999999999
Q ss_pred CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688 149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
|+|++||++++.... ......+...+.+++|+|++ .+|++|+.||.|++||++... ... ...|..
T Consensus 187 ~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~---~~l~~g~~dg~i~~wd~~~~~-~~~--~~~h~~ 251 (435)
T 4e54_B 187 GTTRLQDFKGNILRV---------FASSDTINIWFCSLDVSASS---RMVVTGDNVGNVILLNMDGKE-LWN--LRMHKK 251 (435)
T ss_dssp SCEEEEETTSCEEEE---------EECCSSCSCCCCCEEEETTT---TEEEEECSSSBEEEEESSSCB-CCC--SBCCSS
T ss_pred CEEEEeeccCCceeE---------EeccCCCCccEEEEEECCCC---CEEEEEeCCCcEeeeccCcce-eEE--Eecccc
Confidence 999999998765431 01112334467899999999 899999999999999998643 222 235778
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
.|.+++|+|.+..+|++|+.|+ .|++||++.... .+....+|...|++++|+|++.+ |++++.||.|++||+....
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~-~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~-l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQ-TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR-LLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTS-BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE-EEEEESSSCEEEEESSSSS
T ss_pred eEEeeeecCCCceEEEEecCcc-eeeEEecccccccceEEEeeeccccccceeECCCCCe-eEEEcCCCEEEEEECCCCc
Confidence 9999999995566899999999 699999987322 23334679999999999999998 9999999999999998843
Q ss_pred CCCCCcEEEEeccCC------ceEEEEEcCCCCceEEEEc------------CCeEEEeeC
Q psy17688 307 RAIEDPILAYTAAGG------EINQIQWGATQPDWIAICY------------NKYLEVLRV 349 (349)
Q Consensus 307 ~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~------------d~~v~vw~v 349 (349)
....+..|.. .+..+.|+|++..++++.. ++.|++|++
T Consensus 330 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~ 385 (435)
T 4e54_B 330 -----CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG 385 (435)
T ss_dssp -----SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS
T ss_pred -----cceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC
Confidence 2344444322 2345567777665555542 357999974
No 95
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=240.58 Aligned_cols=244 Identities=16% Similarity=0.230 Sum_probs=204.4
Q ss_pred eEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688 69 STIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS 146 (349)
Q Consensus 69 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (349)
...+|...|++++|+|+++ +|++++ | .|++||+.+++. ...+..| ...|.+++|+| ++++|++++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~vwd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~ 93 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGD-----LLFSCSKDSSASVWYSLNGER--LGTLDGH-----TGTIWSIDVDC-FTKYCVTGS 93 (369)
T ss_dssp EEECCSSCEEEEEECTTSC-----EEEEEESSSCEEEEETTTCCE--EEEECCC-----SSCEEEEEECT-TSSEEEEEE
T ss_pred EEEEeeceEEEEEEcCCCC-----EEEEEeCCCEEEEEeCCCchh--hhhhhhc-----CCcEEEEEEcC-CCCEEEEEe
Confidence 3458999999999999998 888877 5 999999987652 2333333 37899999998 899999999
Q ss_pred cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCCCcee--
Q psy17688 147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHLEHST-- 219 (349)
Q Consensus 147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~-- 219 (349)
.||.|++||+.+++.. ..+. +...+.+++|+|++ +++++++.+ +.|++||++......
T Consensus 94 ~dg~i~iwd~~~~~~~-----------~~~~-~~~~v~~~~~~~~~---~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCV-----------ATWK-SPVPVKRVEFSPCG---NYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp TTTEEEEEETTTCCEE-----------EEEE-CSSCEEEEEECTTS---SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred CCCeEEEEECCCCcEE-----------EEee-cCCCeEEEEEccCC---CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 9999999999998877 3444 78899999999999 899999998 999999998764221
Q ss_pred ---------eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688 220 ---------IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 220 ---------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 290 (349)
..........+.+++|+| ++.+|++++.|+ .|++||++.....+..+..|...|.+++|+|++.+ |++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~ 235 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDG-KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY-FIT 235 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTS-EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE-EEE
T ss_pred cccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCC-EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE-EEE
Confidence 111111223899999999 999999999999 69999999766888889999999999999999998 999
Q ss_pred EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC--------------eEEEeeC
Q psy17688 291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK--------------YLEVLRV 349 (349)
Q Consensus 291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~v~vw~v 349 (349)
++.|+.|++||+++ ...+..+. +...+..++|+|+++.+++++.++ .+++|++
T Consensus 236 ~~~d~~i~v~d~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 236 SSRDTNSFLVDVST-----LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EETTSEEEEEETTT-----CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred ecCCceEEEEECCC-----Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 99999999999987 34455566 588999999999999999999887 7888874
No 96
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-33 Score=245.48 Aligned_cols=243 Identities=14% Similarity=0.266 Sum_probs=198.1
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..|++++|+| +|++ ||+|+. ||.|+||++.. ++... ...+|...+.++.|++ . +|++|+ + .
T Consensus 148 ~~V~sv~fsp--dg~~-lasgs~----Dg~v~iWd~~~--~~~~~-~~~~h~~~v~~~s~~~--~-----~l~sgs~d~~ 210 (420)
T 4gga_A 148 EYISSVAWIK--EGNY-LAVGTS----SAEVQLWDVQQ--QKRLR-NMTSHSARVGSLSWNS--Y-----ILSSGSRSGH 210 (420)
T ss_dssp CCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEET--T-----EEEEEETTSE
T ss_pred CcEEEEEECC--CCCE-EEEEEC----CCeEEEEEcCC--CcEEE-EEeCCCCceEEEeeCC--C-----EEEEEeCCCc
Confidence 6799999999 9996 999999 99999998863 33332 3457999999988764 3 788877 5 9
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++|+....... ...+..|. ..+..+.|+| ++.++++++.|+.+++|+..+++... ........|.
T Consensus 211 i~~~d~~~~~~~-~~~~~~h~-----~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~-------~~~~~~~~~~ 276 (420)
T 4gga_A 211 IHHHDVRVAEHH-VATLSGHS-----QEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGW-------VPLQTFTQHQ 276 (420)
T ss_dssp EEEEETTSSSCE-EEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCS-------CCSEEECCCS
T ss_pred eeEeeeccccee-eEEecccc-----cceeeeeecC-CCCeeeeeeccccceEEeeccccccc-------eeeeeecccC
Confidence 999998875432 22334443 7899999998 99999999999999999998776431 2224567899
Q ss_pred CceeeEEEecCCCCccEEEE--EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEE
Q psy17688 181 KEVYDIAFSRAGGGRDMFAS--VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIIL 256 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~ 256 (349)
..|.+++|+|.+. .++++ |+.|+.|++||+++++....+. ....+.++.|+| ++..+++++ .|+ .|++|
T Consensus 277 ~~V~~~~~~p~~~--~~la~~~gs~D~~I~iwd~~t~~~~~~~~---~~~~v~~~~~~~-~~~~lv~~sg~~d~-~I~iw 349 (420)
T 4gga_A 277 GAVKAVAWCPWQS--NVLATGGGTSDRHIRIWNVCSGACLSAVD---AHSQVCSILWSP-HYKELISGHGFAQN-QLVIW 349 (420)
T ss_dssp SCEEEEEECTTCT--TEEEEEECTTTCEEEEEETTTTEEEEEEE---CSSCEEEEEEET-TTTEEEEEECTTTC-CEEEE
T ss_pred CceeeeeeCCCcc--cEEEEEeecCCCEEEEEeCCccccceeec---cccceeeeeecC-CCCeEEEEEecCCC-EEEEE
Confidence 9999999999874 66665 4589999999999987655543 457899999999 777777655 678 59999
Q ss_pred eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
|+++ ++++.++.+|.+.|++++|+|+|++ |+||+.|++|+|||+...
T Consensus 350 d~~~-~~~v~~l~gH~~~V~~l~~spdg~~-l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 350 KYPT-MAKVAELKGHTSRVLSLTMSPDGAT-VASAAADETLRLWRCFEL 396 (420)
T ss_dssp ETTT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTTEEEEECCSCS
T ss_pred ECCC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEecCCeEEEEECCCC
Confidence 9998 8899999999999999999999999 999999999999999764
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-33 Score=264.10 Aligned_cols=296 Identities=11% Similarity=0.144 Sum_probs=229.7
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
...+..+..+ .+|.+++|+| ++++ ||+|+. +|.|++|++.. ++... ....|...|.+++|+|+++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~--~~~~-l~~~~~----dg~i~vw~~~~--~~~~~-~~~~~~~~v~~~~~s~~~~---- 110 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIA--RKNW-IIVGSD----DFRIRVFNYNT--GEKVV-DFEAHPDYIRSIAVHPTKP---- 110 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEG--GGTE-EEEEET----TSEEEEEETTT--CCEEE-EEECCSSCEEEEEECSSSS----
T ss_pred CceEEEEecCCCcEEEEEEeC--CCCE-EEEEeC----CCeEEEEECCC--CcEEE-EEecCCCCEEEEEEeCCCC----
Confidence 3345556644 7999999999 9996 999988 99999998863 33332 2346999999999999998
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
+|++++ | .|++|++.++.. ....+..|. ..|.+++|+|.++..|++++.||.|++||+.++...
T Consensus 111 -~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~------- 176 (814)
T 3mkq_A 111 -YVLSGSDDLTVKLWNWENNWA-LEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN------- 176 (814)
T ss_dssp -EEEEEETTSEEEEEEGGGTSE-EEEEEECCS-----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS-------
T ss_pred -EEEEEcCCCEEEEEECCCCce-EEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce-------
Confidence 788777 5 999999987532 223333333 789999999867889999999999999999887765
Q ss_pred Cceeeeeec-cCCceeeEEEec--CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688 170 GHVKTQLIA-HDKEVYDIAFSR--AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV 246 (349)
Q Consensus 170 ~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 246 (349)
..+.. +...+..++|+| ++ .++++++.||.|++||+++++....+. .+...|.+++|+| ++.+++++
T Consensus 177 ----~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~ 246 (814)
T 3mkq_A 177 ----FTLTTGQERGVNYVDYYPLPDK---PYMITASDDLTIKIWDYQTKSCVATLE--GHMSNVSFAVFHP-TLPIIISG 246 (814)
T ss_dssp ----EEEECCCTTCCCEEEECCSTTC---CEEEEECTTSEEEEEETTTTEEEEEEE--CCSSCEEEEEECS-SSSEEEEE
T ss_pred ----eEEecCCCCCEEEEEEEECCCC---CEEEEEeCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEcC-CCCEEEEE
Confidence 33444 448899999999 77 799999999999999999876544442 4678999999999 99999999
Q ss_pred eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-----------------
Q psy17688 247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----------------- 309 (349)
Q Consensus 247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----------------- 309 (349)
+.|| .|++||+.+ ++.+..+..|...+.+++|+|++..++++++.++.+.+|++.......
T Consensus 247 ~~dg-~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 324 (814)
T 3mkq_A 247 SEDG-TLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAA 324 (814)
T ss_dssp ETTS-CEEEEETTT-CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSC
T ss_pred eCCC-eEEEEECCC-CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECccccc
Confidence 9999 599999997 788889999999999999999998644555567788999876421100
Q ss_pred ---------------------CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 310 ---------------------EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 310 ---------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.........+...+.+++|+|+++++++++ ++.+.+|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 325 ASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp TTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred ceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEEC
Confidence 001112233455678899999998666655 888988874
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.7e-33 Score=243.07 Aligned_cols=276 Identities=18% Similarity=0.256 Sum_probs=221.6
Q ss_pred ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688 14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD 92 (349)
Q Consensus 14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 92 (349)
+.+..+..+ .+|.+++|+ +++ |++|+. +|.|++|++.. ++... ...+|...|.++.|++ +
T Consensus 150 ~~~~~~~~h~~~v~~~~~~----~~~-l~s~~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~--~----- 210 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR----DNI-IISGST----DRTLKVWNAET--GECIH-TLYGHTSTVRCMHLHE--K----- 210 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE----TTE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEET--T-----
T ss_pred cEEEEEcCCCCCEEEEEec----CCE-EEEEeC----CCeEEEEECCc--CcEEE-EECCCCCcEEEEEecC--C-----
Confidence 344555544 789999987 343 999988 99999998863 33332 2447899999999964 3
Q ss_pred EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
.+++++ | .|++||+.+++. ...+..| ...|.+++| +++.+++|+.||.|++||+++++.+
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~--~~~~~~~-----~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~-------- 272 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQC--LHVLMGH-----VAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCL-------- 272 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCE--EEEEECC-----SSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEE--------
T ss_pred EEEEEeCCCEEEEEECCCCcE--EEEEcCC-----cccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEe--------
Confidence 566666 6 999999987653 2233333 378999998 5689999999999999999998877
Q ss_pred ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
..+.+|...|.+++| ++ ..+++++.|+.|++||+++++....+ ..+...+.++.++ +.++++|+.|+
T Consensus 273 ---~~~~~~~~~v~~~~~--~~---~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~---~~~l~~~~~dg 339 (445)
T 2ovr_B 273 ---HTLQGHTNRVYSLQF--DG---IHVVSGSLDTSIRVWDVETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADS 339 (445)
T ss_dssp ---EEECCCSSCEEEEEE--CS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCCSCEEEEEEE---TTEEEEEETTS
T ss_pred ---EEecCCCCceEEEEE--CC---CEEEEEeCCCeEEEEECCCCCEEEEE--cCCcccEEEEEEe---CCEEEEEeCCC
Confidence 567889999999999 55 79999999999999999998765444 3466778888775 56999999999
Q ss_pred cEEEEEeccCCCcceeEeec---CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-----eccCCc
Q psy17688 251 CEVIILDVRVPCTPVARLNN---HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-----TAAGGE 322 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~ 322 (349)
.|++||+++ ++++..+.. |...|++++|+ +.+ |++++.||.|++||+.++ +.+..+ ..|.+.
T Consensus 340 -~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~ 409 (445)
T 2ovr_B 340 -TVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNF-VITSSDDGTVKLWDLKTG-----EFIRNLVTLESGGSGGV 409 (445)
T ss_dssp -CEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSE-EEEEETTSEEEEEETTTC-----CEEEEEEECTTGGGTCE
T ss_pred -eEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCE-EEEEeCCCeEEEEECCCC-----ceeeeeeccccCCCCce
Confidence 599999987 778888876 88899999996 455 999999999999999883 345555 367889
Q ss_pred eEEEEEcCCCCceEEEEcCCe----EEEeeC
Q psy17688 323 INQIQWGATQPDWIAICYNKY----LEVLRV 349 (349)
Q Consensus 323 v~~~~~~~~~~~l~~~~~d~~----v~vw~v 349 (349)
|++++|+|++..+++++.||. |.+|++
T Consensus 410 v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 410 VWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred EEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 999999999998888888997 999974
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-35 Score=257.26 Aligned_cols=278 Identities=13% Similarity=0.181 Sum_probs=207.4
Q ss_pred EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec-CCCCCCCcEEEEeC-C-cEEEEE
Q psy17688 29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP-DRKGVFPDLLATSG-D-YLRVWR 105 (349)
Q Consensus 29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~-~i~vw~ 105 (349)
.|+| +++. ++++. .|+. +++.......+|.+.|++++|+| +++ +|++|+ | .|+|||
T Consensus 34 ~f~~--~~~~-~~~~~----------~w~~---~g~~~~~~~~~h~~~V~~~~~s~~~~~-----~l~s~s~dg~v~vwd 92 (437)
T 3gre_A 34 EFGP--IQEI-VRSPN----------MGNL---RGKLIATLMENEPNSITSSAVSPGETP-----YLITGSDQGVIKIWN 92 (437)
T ss_dssp GGCC--CCCC-CCCCC----------GGGC---CCCEEEEECTTTTSCEEEEEEECSSSC-----EEEEEETTSEEEEEE
T ss_pred hcCC--cccc-ccccc----------cccc---cceEEeeeccCCCCceEEEEECCCCCC-----EEEEecCCceEEEeE
Confidence 4566 7774 55541 3543 35544443357889999999999 887 888888 5 999999
Q ss_pred CCC---CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc---CcceeeeecccCCceeeeee--
Q psy17688 106 AGE---PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE---TNQVVGRVNSVSGHVKTQLI-- 177 (349)
Q Consensus 106 ~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~-- 177 (349)
+.+ ... ...... ..|...|.+++|+| ++++|++|+.||.|++||+. +++....... ..+..+.
T Consensus 93 ~~~~~~~~~-~~~~~~----~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~---~~i~~~~~~ 163 (437)
T 3gre_A 93 LKEIIVGEV-YSSSLT----YDCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC---ECIRKINLK 163 (437)
T ss_dssp HHHHHTTCC-CSCSEE----EECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE---EEEEEEEGG
T ss_pred CcccccCcc-cceeee----ccCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeecccc---ceeEEEEcc
Confidence 876 220 111111 12447999999998 99999999999999999995 4444322111 1111121
Q ss_pred c--cCCceeeEE--EecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 178 A--HDKEVYDIA--FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 178 ~--~~~~v~~~~--~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
. +...+.++. +++++ .++++++.|+.|++||+++++....+....+...|.+++|+| ++.+|++|+.|+ .|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg-~i 238 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEK---SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRG-II 238 (437)
T ss_dssp GGSSCCCEEEEEEEECSSC---EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTS-CE
T ss_pred CcccccCceEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCC-eE
Confidence 1 455677777 45677 899999999999999999987766665433678999999999 899999999999 59
Q ss_pred EEEeccCCCcceeEee-cCCcceEEEEEee----CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec----------
Q psy17688 254 IILDVRVPCTPVARLN-NHRACVNGIAWAP----HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA---------- 318 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---------- 318 (349)
++||++. ++++..+. .|...|++++|+| ++.+ |++++.||.|++||+++.. .+..+..
T Consensus 239 ~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 239 DIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVI-VVGGSSKTFLTIWNFVKGH-----CQYAFINSDEQPSMEHF 311 (437)
T ss_dssp EEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEE-EEEESTTEEEEEEETTTTE-----EEEEEESSSSCCCGGGG
T ss_pred EEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccE-EEEEcCCCcEEEEEcCCCc-----EEEEEEcCCCCCcccee
Confidence 9999997 88888875 7888999997765 4666 9999999999999998743 2333332
Q ss_pred ----------------cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 319 ----------------AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 319 ----------------~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|...|++++|+ ++++|++++.|+.|++|++
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 312 LPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp SCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred cccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 56678899999 6678889999999999985
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.6e-33 Score=243.11 Aligned_cols=272 Identities=14% Similarity=0.201 Sum_probs=218.5
Q ss_pred eeeeecC-Cc-eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 16 IYKYEAP-WP-LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 16 ~~~~~~~-~~-v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
...+..+ .. +.++ ++ +|++ |++|+. +|.|++|++.. ++... ...+|...|.+++|++ . +
T Consensus 111 ~~~l~~h~~~v~~~~--~~--~g~~-l~sg~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~--~-----~ 171 (445)
T 2ovr_B 111 PKVLKGHDDHVITCL--QF--CGNR-IVSGSD----DNTLKVWSAVT--GKCLR-TLVGHTGGVWSSQMRD--N-----I 171 (445)
T ss_dssp CEEEECSTTSCEEEE--EE--ETTE-EEEEET----TSCEEEEETTT--CCEEE-ECCCCSSCEEEEEEET--T-----E
T ss_pred eEEecccCCCcEEEE--EE--cCCE-EEEEEC----CCcEEEEECCC--CcEEE-EEcCCCCCEEEEEecC--C-----E
Confidence 3445555 33 4554 45 6775 999998 99999998863 33332 2347999999999983 3 6
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
+++++ | .|++||+.+++. ...+.. |...|.++.|+ ++.+++|+.||.|++||+.+++..
T Consensus 172 l~s~~~dg~i~vwd~~~~~~--~~~~~~-----h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~--------- 232 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGEC--IHTLYG-----HTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCL--------- 232 (445)
T ss_dssp EEEEETTSCEEEEETTTTEE--EEEECC-----CSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEE---------
T ss_pred EEEEeCCCeEEEEECCcCcE--EEEECC-----CCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEE---------
Confidence 77766 6 999999988642 223333 34789999985 468999999999999999998877
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
..+.+|...|.+++| ++ ..+++++.||.|++||+++++....+ ..+...+.+++| ++.++++++.|+
T Consensus 233 --~~~~~~~~~v~~~~~--~~---~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~---~~~~l~~~~~d~- 299 (445)
T 2ovr_B 233 --HVLMGHVAAVRCVQY--DG---RRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF---DGIHVVSGSLDT- 299 (445)
T ss_dssp --EEEECCSSCEEEEEE--CS---SCEEEEETTSCEEEEEGGGTEEEEEE--CCCSSCEEEEEE---CSSEEEEEETTS-
T ss_pred --EEEcCCcccEEEEEE--CC---CEEEEEcCCCEEEEEECCCCcEeEEe--cCCCCceEEEEE---CCCEEEEEeCCC-
Confidence 567889999999999 45 78999999999999999987654444 357788999999 678999999999
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec---cCCceEEEEE
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA---AGGEINQIQW 328 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~ 328 (349)
.|++||+++ ++++..+.+|...+.++.++ +.+ |++++.||.|++||+++ ..++..+.. |...|.+++|
T Consensus 300 ~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 300 SIRVWDVET-GNCIHTLTGHQSLTSGMELK--DNI-LVSGNADSTVKIWDIKT-----GQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp CEEEEETTT-CCEEEEECCCCSCEEEEEEE--TTE-EEEEETTSCEEEEETTT-----CCEEEEECSTTSCSSCEEEEEE
T ss_pred eEEEEECCC-CCEEEEEcCCcccEEEEEEe--CCE-EEEEeCCCeEEEEECCC-----CcEEEEEccCCCCCCCEEEEEE
Confidence 599999998 88889999999999988775 556 99999999999999987 445677775 7889999999
Q ss_pred cCCCCceEEEEcCCeEEEeeC
Q psy17688 329 GATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 329 ~~~~~~l~~~~~d~~v~vw~v 349 (349)
++ .++++++.||.|++|++
T Consensus 371 ~~--~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 371 NK--NFVITSSDDGTVKLWDL 389 (445)
T ss_dssp CS--SEEEEEETTSEEEEEET
T ss_pred CC--CEEEEEeCCCeEEEEEC
Confidence 64 67999999999999985
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-33 Score=243.09 Aligned_cols=242 Identities=15% Similarity=0.233 Sum_probs=197.0
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D 99 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~ 99 (349)
....|++++|+| ++++ ||+|+. +|.|++|++... +... ....|...|.+++|++ . ++++++ +
T Consensus 133 ~~~~v~~v~~s~--~~~~-l~~~~~----dg~i~iwd~~~~--~~~~-~~~~~~~~v~~~~~~~--~-----~l~~~~~d 195 (401)
T 4aez_A 133 ESTYVASVKWSH--DGSF-LSVGLG----NGLVDIYDVESQ--TKLR-TMAGHQARVGCLSWNR--H-----VLSSGSRS 195 (401)
T ss_dssp TTCCEEEEEECT--TSSE-EEEEET----TSCEEEEETTTC--CEEE-EECCCSSCEEEEEEET--T-----EEEEEETT
T ss_pred CCCCEEEEEECC--CCCE-EEEECC----CCeEEEEECcCC--eEEE-EecCCCCceEEEEECC--C-----EEEEEcCC
Confidence 357899999999 9996 999988 999999988633 3322 2347999999999954 3 677776 5
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++||+...... ...+..| ...|.+++|+| ++.+|++|+.||.|++||+++++.. ..+..
T Consensus 196 g~i~i~d~~~~~~~-~~~~~~~-----~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~-----------~~~~~ 257 (401)
T 4aez_A 196 GAIHHHDVRIANHQ-IGTLQGH-----SSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPK-----------FTKTN 257 (401)
T ss_dssp SEEEEEETTSSSCE-EEEEECC-----SSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEE-----------EEECC
T ss_pred CCEEEEecccCcce-eeEEcCC-----CCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCcc-----------EEecC
Confidence 9999999854322 2233333 37899999998 9999999999999999999988776 56778
Q ss_pred cCCceeeEEEecCCCCccEEEEEc--CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEE
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVG--AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVI 254 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~ 254 (349)
|...|.+++|+|++. .++++++ .|+.|++||+++++....+ .+...+.+++|+| ++.++++++ .|+ .|+
T Consensus 258 ~~~~v~~~~~~p~~~--~ll~~~~gs~d~~i~i~d~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~g~~dg-~i~ 330 (401)
T 4aez_A 258 HNAAVKAVAWCPWQS--NLLATGGGTMDKQIHFWNAATGARVNTV---DAGSQVTSLIWSP-HSKEIMSTHGFPDN-NLS 330 (401)
T ss_dssp CSSCCCEEEECTTST--TEEEEECCTTTCEEEEEETTTCCEEEEE---ECSSCEEEEEECS-SSSEEEEEECTTTC-EEE
T ss_pred CcceEEEEEECCCCC--CEEEEecCCCCCEEEEEECCCCCEEEEE---eCCCcEEEEEECC-CCCeEEEEeecCCC-cEE
Confidence 999999999999774 6777765 7999999999988765554 3557899999999 889888854 788 699
Q ss_pred EEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 255 ILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 255 v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
+||++. +.. ...+.+|...|.+++|+|++++ |++++.||.|++||+...+
T Consensus 331 v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 331 IWSYSS-SGLTKQVDIPAHDTRVLYSALSPDGRI-LSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEET-TEEEEEEEEECCSSCCCEEEECTTSSE-EEEECTTSEEEEEECCC--
T ss_pred EEecCC-ccceeEEEecCCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCc
Confidence 999986 433 3346789999999999999998 9999999999999998854
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.8e-33 Score=244.87 Aligned_cols=285 Identities=13% Similarity=0.169 Sum_probs=215.9
Q ss_pred cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec--CCCCC
Q psy17688 13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP--DRKGV 89 (349)
Q Consensus 13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~ 89 (349)
.+.+..+..+ .+|++++|+| ++ + |++|+. +|.|++|++.. ++... ...+|...|.+++|++ ++.
T Consensus 152 ~~~~~~~~~h~~~V~~l~~~~--~~-~-l~s~s~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~l~~~~~~~~~-- 218 (464)
T 3v7d_B 152 KKFLLQLSGHDGGVWALKYAH--GG-I-LVSGST----DRTVRVWDIKK--GCCTH-VFEGHNSTVRCLDIVEYKNIK-- 218 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECS--TT-E-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEEESSSCE--
T ss_pred CcEEEEEeCCCcCEEEEEEcC--CC-E-EEEEeC----CCCEEEEECCC--CcEEE-EECCCCCccEEEEEecCCCCC--
Confidence 3455566644 7999999997 66 4 999988 99999998863 33332 2346999999999996 444
Q ss_pred CCcEEEEeC-C-cEEEEECCCCCchhheecc----------------CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 90 FPDLLATSG-D-YLRVWRAGEPETRLECILN----------------NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
++++++ | .|++||+.+.......... ......|...+.++. + +++++++|+.||.|
T Consensus 219 ---~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 219 ---YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTL 292 (464)
T ss_dssp ---EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCE
T ss_pred ---EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeE
Confidence 788777 5 9999999876422110000 001123446777764 3 78899999999999
Q ss_pred EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688 152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL 231 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~ 231 (349)
++||+.+++.+ ..+.+|...|.+++|+|++ +.+++++.||.|++||+++++....+ ..+...|.
T Consensus 293 ~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~ 356 (464)
T 3v7d_B 293 IVWDVAQMKCL-----------YILSGHTDRIYSTIYDHER---KRCISASMDTTIRIWDLENGELMYTL--QGHTALVG 356 (464)
T ss_dssp EEEETTTTEEE-----------EEECCCSSCEEEEEEETTT---TEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEE
T ss_pred EEEECCCCcEE-----------EEecCCCCCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCcEEEEE--eCCCCcEE
Confidence 99999988877 6678899999999999999 89999999999999999987755444 35778999
Q ss_pred EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688 232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED 311 (349)
Q Consensus 232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 311 (349)
+++|+ +.+|++++.|+ .|++||+++ ....... .+...+..++|+|++.+ |++++ ||.|++||++++ +
T Consensus 357 ~~~~~---~~~l~s~s~dg-~v~vwd~~~-~~~~~~~-~~~~~~~~~~~~~~~~~-l~~~~-dg~i~iwd~~~g-----~ 423 (464)
T 3v7d_B 357 LLRLS---DKFLVSAAADG-SIRGWDAND-YSRKFSY-HHTNLSAITTFYVSDNI-LVSGS-ENQFNIYNLRSG-----K 423 (464)
T ss_dssp EEEEC---SSEEEEEETTS-EEEEEETTT-CCEEEEE-ECTTCCCEEEEEECSSE-EEEEE-TTEEEEEETTTC-----C
T ss_pred EEEEc---CCEEEEEeCCC-cEEEEECCC-Cceeeee-cCCCCccEEEEEeCCCE-EEEec-CCeEEEEECCCC-----c
Confidence 99996 47999999999 699999987 4444433 35677888999999997 88888 899999999984 3
Q ss_pred cEEE-EeccCCceEEEEEcCCCCceEEE-EcCCeEEEe
Q psy17688 312 PILA-YTAAGGEINQIQWGATQPDWIAI-CYNKYLEVL 347 (349)
Q Consensus 312 ~~~~-~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vw 347 (349)
.+.. +..|...|.+++|+. ..++++ +.|+.+.+|
T Consensus 424 ~~~~~~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 424 LVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEESCTTTTCSEEEEEEEET--TEEEEEEEETTEEEEE
T ss_pred EEehhhccCCCcEEEEEecC--CEEEEEEEeCCeEEEE
Confidence 3432 456788999999983 345554 456665554
No 103
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-33 Score=242.26 Aligned_cols=244 Identities=13% Similarity=0.120 Sum_probs=188.0
Q ss_pred EecCCCCeeEEEEecCC-CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688 70 TIDHPYPTTKIMWIPDR-KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS 146 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (349)
..+|...|++++|+|++ + +|++|+ | .|++|++.+.......... .|...|.+++|+|.++++|++++
T Consensus 69 ~~~h~~~v~~~~~~~~~~~-----~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPT-----TVAVGSKGGDIILWDYDVQNKTSFIQGM-----GPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp ECCCSSCEEEEEECSSCTT-----EEEEEEBTSCEEEEETTSTTCEEEECCC-----STTCBEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCCC-----EEEEEcCCCeEEEEeCCCcccceeeecC-----CcCCceeEEEeCCCCCCEEEEEe
Confidence 34789999999999998 5 888887 5 9999999876533222112 24489999999986679999999
Q ss_pred cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688 147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ 226 (349)
Q Consensus 147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 226 (349)
.|+.|++||+.+.... . ......|...|.+++|+|++ ++|++++.|+.|++||++. +....+ ..+
T Consensus 139 ~d~~i~iwd~~~~~~~-~--------~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~-~~~~~~--~~h 203 (383)
T 3ei3_B 139 IRGATTLRDFSGSVIQ-V--------FAKTDSWDYWYCCVDVSVSR---QMLATGDSTGRLLLLGLDG-HEIFKE--KLH 203 (383)
T ss_dssp TTTEEEEEETTSCEEE-E--------EECCCCSSCCEEEEEEETTT---TEEEEEETTSEEEEEETTS-CEEEEE--ECS
T ss_pred CCCEEEEEECCCCceE-E--------EeccCCCCCCeEEEEECCCC---CEEEEECCCCCEEEEECCC-CEEEEe--ccC
Confidence 9999999999863332 1 01223445789999999999 8999999999999999953 333333 257
Q ss_pred CCceeEEEEeCCCCC-eEEEEeeCCcEEEEEeccCC---CcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEE
Q psy17688 227 HTPLLRLAWNKQDPN-YLAMVAMNACEVIILDVRVP---CTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWD 301 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~-~l~~~~~d~~~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd 301 (349)
...|.+++|+| ++. +|++++.|+ .|++||++.. ...+..+ .|...|.+++|+| ++.+ |++++.|+.|++||
T Consensus 204 ~~~v~~~~~~~-~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~-l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 204 KAKVTHAEFNP-RCDWLMATSSVDA-TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTK-LLTTDQRNEIRVYS 279 (383)
T ss_dssp SSCEEEEEECS-SCTTEEEEEETTS-EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCE-EEEEESSSEEEEEE
T ss_pred CCcEEEEEECC-CCCCEEEEEeCCC-EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCE-EEEEcCCCcEEEEE
Confidence 78999999999 666 999999999 6999999862 2334444 6999999999999 9988 99999999999999
Q ss_pred eecCCCCCCCcEEEEecc-----------------CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 302 IQQMPRAIEDPILAYTAA-----------------GGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+++... ...+..| .+.+..++|+|++.+ +++.|+.|++|++
T Consensus 280 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 280 SYDWSK-----PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp TTBTTS-----CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred CCCCcc-----ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence 988543 2223222 234455677777764 6678999999985
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=252.95 Aligned_cols=260 Identities=10% Similarity=0.212 Sum_probs=193.1
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc---------hhheeccCCCCC-------CCcCceeEE
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET---------RLECILNNNKNS-------DFCAPLTSF 132 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~---------~~~~~~~~~~~~-------~~~~~i~~~ 132 (349)
..+.+.|++++|+|+++ +||+|+ | .|+||++.+... .....+.+|..+ .....|+++
T Consensus 25 ~~~~~~V~~v~~s~~g~-----~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGE-----LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CCGGGSEEEEEECSSSS-----EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred ccccCcEEEEEECCCCC-----EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEE
Confidence 35678999999999998 888887 5 999999987541 012223333200 001679999
Q ss_pred EecCCCC--CeEEEEEcCCeEEEEeccCcceeeeeccc---C-------------------------Cceeee-eeccCC
Q psy17688 133 DWNEVDP--NLLGTSSIDTTCTIWCLETNQVVGRVNSV---S-------------------------GHVKTQ-LIAHDK 181 (349)
Q Consensus 133 ~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~-------------------------~~~~~~-~~~~~~ 181 (349)
+|+| ++ ..|++++.||.|++||+.+++........ . ..+... ..+|..
T Consensus 100 ~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 100 RWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 9998 65 79999999999999999875542110000 0 000112 367999
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-eeee-----eeCCCCCceeEEEEeCCCC-CeEEEEeeCCcEEE
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-STII-----YEDPQHTPLLRLAWNKQDP-NYLAMVAMNACEVI 254 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~-----~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~i~ 254 (349)
.|.+++|+|++ ++|+++ .|+.|++||++.... ...+ ....+...|.+++|+| ++ .+|++|+.|+ .|+
T Consensus 179 ~v~~~~~~~~~---~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg-~i~ 252 (447)
T 3dw8_B 179 HINSISINSDY---ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKG-TIR 252 (447)
T ss_dssp CCCEEEECTTS---SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTS-CEE
T ss_pred ceEEEEEcCCC---CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCC-eEE
Confidence 99999999998 899998 799999999995332 2211 1235778899999999 66 9999999999 599
Q ss_pred EEeccCCCcc----eeEeecCCc------------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688 255 ILDVRVPCTP----VARLNNHRA------------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA 318 (349)
Q Consensus 255 v~d~~~~~~~----~~~~~~~~~------------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 318 (349)
+||++. +.. +..+..|.. .|.+++|+|++++ |++++. +.|++||++... .++..+..
T Consensus 253 iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~-~~v~iwd~~~~~----~~~~~~~~ 325 (447)
T 3dw8_B 253 LCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDY-LSVKVWDLNMEN----RPVETYQV 325 (447)
T ss_dssp EEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEES-SEEEEEETTCCS----SCSCCEES
T ss_pred EEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEeeC-CeEEEEeCCCCc----cccceeec
Confidence 999997 554 677888776 8999999999998 889888 999999998632 24556666
Q ss_pred cCCc---------------eEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 319 AGGE---------------INQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 319 ~~~~---------------v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|... +..++|+|++++|++++.|+.|++|++
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 6432 334999999999999999999999985
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.7e-34 Score=239.57 Aligned_cols=243 Identities=12% Similarity=0.110 Sum_probs=197.6
Q ss_pred cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh-heeccCCCCCCCcCceeEEEecCCCCC-eEEEEEc
Q psy17688 72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL-ECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSI 147 (349)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~ 147 (349)
+|.+.|++++|+|+++ +|++++ | .|++|++....... ..... .|...|.+++|+| +++ +|++|+.
T Consensus 9 ~h~~~v~~~~~s~~~~-----~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~l~~~~~ 77 (342)
T 1yfq_A 9 APKDYISDIKIIPSKS-----LLLITSWDGSLTVYKFDIQAKNVDLLQSL-----RYKHPLLCCNFID-NTDLQIYVGTV 77 (342)
T ss_dssp CCSSCEEEEEEEGGGT-----EEEEEETTSEEEEEEEETTTTEEEEEEEE-----ECSSCEEEEEEEE-SSSEEEEEEET
T ss_pred CCCCcEEEEEEcCCCC-----EEEEEcCCCeEEEEEeCCCCccccceeee-----ecCCceEEEEECC-CCCcEEEEEcC
Confidence 6889999999999988 777776 5 99999998764111 11122 3347899999998 889 9999999
Q ss_pred CCeEEEEec-cCcceeeeecccCCceeeeeec--cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC---------C
Q psy17688 148 DTTCTIWCL-ETNQVVGRVNSVSGHVKTQLIA--HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH---------L 215 (349)
Q Consensus 148 dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~---------~ 215 (349)
||.|++||+ .+++. ..+.+ |...|.+++|+| + ..+++++.|+.|++||+++ .
T Consensus 78 dg~i~~wd~~~~~~~------------~~~~~~~~~~~v~~l~~~~-~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 78 QGEILKVDLIGSPSF------------QALTNNEANLGICRICKYG-D---DKLIAASWDGLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp TSCEEEECSSSSSSE------------EECBSCCCCSCEEEEEEET-T---TEEEEEETTSEEEEECHHHHTTBCEEEEE
T ss_pred CCeEEEEEeccCCce------------EeccccCCCCceEEEEeCC-C---CEEEEEcCCCeEEEEcccccccccccccC
Confidence 999999999 77755 35677 999999999999 7 7999999999999999986 4
Q ss_pred CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-CCcc-eeEeecCCcceEEEEEee-CCCCEEEEEc
Q psy17688 216 EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-PCTP-VARLNNHRACVNGIAWAP-HSSCHICTAG 292 (349)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-~~~~-~~~~~~~~~~v~~~~~~p-~~~~~l~~~~ 292 (349)
+....+ .+...+.+++|+| ++ +++++.++ .|++||++. .... ......|...+.+++|+| ++.+ +++++
T Consensus 142 ~~~~~~---~~~~~v~~~~~~~-~~--l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-l~~~~ 213 (342)
T 1yfq_A 142 LNSNNT---KVKNKIFTMDTNS-SR--LIVGMNNS-QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG-YACSS 213 (342)
T ss_dssp SCSSSS---SSCCCEEEEEECS-SE--EEEEESTT-EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE-EEEEE
T ss_pred CeeeEE---eeCCceEEEEecC-Cc--EEEEeCCC-eEEEEECCccccccceeeecCCCCceeEEEECCCCCCE-EEEEe
Confidence 433322 3678899999998 55 99999999 699999986 3332 334456788999999999 9998 99999
Q ss_pred CCCcEEEEEeecCC-CCCCCcEEEEeccCC---------ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 293 DDHQALIWDIQQMP-RAIEDPILAYTAAGG---------EINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 293 ~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.||.|++||++... .....+...+..|.. .|.+++|+|++++|++++.|+.|++|++
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 99999999998741 111245677887755 9999999999999999999999999985
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-34 Score=263.77 Aligned_cols=248 Identities=16% Similarity=0.236 Sum_probs=201.6
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-C
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG-D 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~-~ 99 (349)
.+|++++|+| ++++ |++|+. +|.|+||++...++.... ...+|..+|++++|+|+ +. +|++|+ |
T Consensus 10 ~~V~~l~~s~--dg~~-latg~~----dg~I~vwd~~~~~~~~~~-~l~~h~~~V~~l~~s~~~~~~-----~l~s~s~D 76 (753)
T 3jro_A 10 ELIHDAVLDY--YGKR-LATCSS----DKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGT-----ILASCSYD 76 (753)
T ss_dssp CCEEEECCCS--SSCC-EEEEET----TTEEEEEEEETTEEEEEE-EECCCSSCEEEEEECCTTSCS-----EEEEEETT
T ss_pred ceeEEEEECC--CCCe-EEEEEC----CCcEEEEecCCCCCccce-eccCCcCceEEEEecCCCCCC-----EEEEEeCC
Confidence 7899999999 9996 999988 999999998754444332 24479999999999988 65 888887 5
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL 176 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 176 (349)
.|++||+.++.......... |...|++++|+| + ++.+++|+.||.|++||+.++.... ...+
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~-----h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~---------~~~~ 141 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAV-----HSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS---------PIII 141 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECC-----CSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCC---------CEEE
T ss_pred CeEEEEECCCCcccccccccC-----CCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcc---------eeEe
Confidence 99999998864323333333 347899999998 6 8999999999999999998874431 1456
Q ss_pred eccCCceeeEEEecC-------------CCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCC--
Q psy17688 177 IAHDKEVYDIAFSRA-------------GGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQD-- 239 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~-------------~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~-- 239 (349)
.+|...|.+++|+|. + ..+++|+.||.|++||++++... .......|..+|.+++|+| +
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~ 217 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVL 217 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGG---CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCS
T ss_pred ecCCCceEEEEecCcccccccccccCCCC---CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCC
Confidence 789999999999994 6 79999999999999999986532 2222346788999999999 6
Q ss_pred -CCeEEEEeeCCcEEEEEeccCCCc----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 240 -PNYLAMVAMNACEVIILDVRVPCT----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 240 -~~~l~~~~~d~~~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+.+|++++.|+ .|++||++.... .......|...|++++|+|++++ |++++.||.|++||++.
T Consensus 218 ~~~~l~s~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 218 LRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSEEEEEEESSS-CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCS
T ss_pred CCCEEEEEecCC-EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCC
Confidence 89999999999 599999987321 33334568899999999999999 99999999999999984
No 107
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.7e-33 Score=237.51 Aligned_cols=248 Identities=7% Similarity=0.104 Sum_probs=185.7
Q ss_pred CceeeEEEeecCCCceEEEEEeeec-------ccCCeEEEEeccccccccccceE------ecCCCCeeEEEEecCCCCC
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVE-------EYNNKVQIVALNEDISEFGPKST------IDHPYPTTKIMWIPDRKGV 89 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~-------~~~g~i~i~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~ 89 (349)
..+.+++|+ ++. +++|...+ ..++.+++|+++...+....... ..+...+.+++|+||++..
T Consensus 74 ~~v~s~~~~----~~~-~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l 148 (365)
T 4h5i_A 74 DSPTAIDAS----KGI-ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA 148 (365)
T ss_dssp CCCCEEEEE----TTE-EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred CceEEEEeC----CCE-EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence 467777654 553 66665422 34788999998765443322211 1234568999999999831
Q ss_pred CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
.+|+++ | +|+|||+.+.+.. ..+. + ...|.+++|+| +++++++++.+ .+.+|+..+++....
T Consensus 149 ---a~as~~~d~~i~iwd~~~~~~~--~~~~-~-----~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~--- 212 (365)
T 4h5i_A 149 ---AIASSKVPAIMRIIDPSDLTEK--FEIE-T-----RGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIAR--- 212 (365)
T ss_dssp ---EEEESCSSCEEEEEETTTTEEE--EEEE-C-----SSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEE---
T ss_pred ---EEEECCCCCEEEEeECCCCcEE--EEeC-C-----CCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceee---
Confidence 234454 4 9999999886532 2222 2 25799999998 99999999865 566666666655421
Q ss_pred cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC----cEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCCCC
Q psy17688 168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG----SVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQDPN 241 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 241 (349)
.....|...|.+++|+|++ ..+++++.|+ .+++||+....... ......+...|.+++|+| +++
T Consensus 213 ------~~~~~~~~~v~~v~fspdg---~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~ 282 (365)
T 4h5i_A 213 ------KTDFDKNWSLSKINFIADD---TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGE 282 (365)
T ss_dssp ------ECCCCTTEEEEEEEEEETT---EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSC
T ss_pred ------eecCCCCCCEEEEEEcCCC---CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCC
Confidence 2346788899999999999 8999998887 68899988754322 222335778899999999 999
Q ss_pred eEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 242 YLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+||+|+.|+ +|+|||+++ ++++..+ .+|..+|++++|+|||++ |++||.|++|+|||+..
T Consensus 283 ~lasgs~D~-~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~~-laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 283 LAVLASNDN-SIALVKLKD-LSMSKIFKQAHSFAITEVTISPDSTY-VASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTS-CEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSCE-EEEEETTSEEEEEECCT
T ss_pred ceEEEcCCC-EEEEEECCC-CcEEEEecCcccCCEEEEEECCCCCE-EEEEeCCCeEEEEEcCC
Confidence 999999999 599999997 7888775 789999999999999998 99999999999999965
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.7e-33 Score=241.96 Aligned_cols=254 Identities=14% Similarity=0.217 Sum_probs=197.9
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT 152 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~ 152 (349)
.....++++|+... ++++++ + .|+||++........ ......+|...|++++|+|.++++|++|+.||.|+
T Consensus 35 ~~~~~~~~~~~~~~----~~~~~~~~g~i~v~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~ 107 (402)
T 2aq5_A 35 WDSGFCAVNPKFMA----LICEASGGGAFLVLPLGKTGRVDK---NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVM 107 (402)
T ss_dssp CSSCSEEECSSEEE----EEBCCSSSCCEEEEETTCCEECCT---TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred cCCCcEEECCCeEE----EEEEEcCCCEEEEEECccCCCCCC---CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEE
Confidence 34556888888752 444444 5 999999976432111 11112345589999999986889999999999999
Q ss_pred EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688 153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR 232 (349)
Q Consensus 153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 232 (349)
+||+.++...... ......+.+|...|.+++|+|++. ++|++++.|+.|++||+++++....+....+...|.+
T Consensus 108 vw~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 108 VWEIPDGGLVLPL----REPVITLEGHTKRVGIVAWHPTAQ--NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp EEECCTTCCSSCB----CSCSEEEECCSSCEEEEEECSSBT--TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred EEEccCCCCcccc----CCceEEecCCCCeEEEEEECcCCC--CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence 9999987432100 012267889999999999999973 5999999999999999998765544422457889999
Q ss_pred EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcc-eEEEEEeeCCCCEEEEE---cCCCcEEEEEeecCCC
Q psy17688 233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRAC-VNGIAWAPHSSCHICTA---GDDHQALIWDIQQMPR 307 (349)
Q Consensus 233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~~l~~~---~~d~~v~iwd~~~~~~ 307 (349)
++|+| ++.+|++++.|+ .|++||+++ ++.+..+ ..|.+. +.++.|+|++.+ |++| +.|+.|++||++....
T Consensus 182 ~~~~~-~~~~l~~~~~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 182 VDWSR-DGALICTSCRDK-RVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKI-LTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp EEECT-TSSCEEEEETTS-EEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEE-EEEEECTTCCEEEEEEETTBCSS
T ss_pred EEECC-CCCEEEEEecCC-cEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcE-EEEeccCCCCceEEEEcCccccC
Confidence 99999 999999999999 699999997 7778887 678776 899999999987 8888 7999999999988543
Q ss_pred CCCCcEEEEe-ccCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688 308 AIEDPILAYT-AAGGEINQIQWGATQPDWIAIC-YNKYLEVLRV 349 (349)
Q Consensus 308 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v 349 (349)
++.... .|...+.+++|+|++..+++++ .|+.|++|++
T Consensus 258 ----~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 258 ----PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp ----CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred ----CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 223332 4577899999999999887655 5999999984
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=227.82 Aligned_cols=237 Identities=12% Similarity=0.134 Sum_probs=196.5
Q ss_pred EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688 70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI 147 (349)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (349)
..+|...|++++| |++. +|++++ | .|++||+.+... ...+..+ ...|.+++|+| ++.+|++++.
T Consensus 14 l~~h~~~v~~~~~-~~~~-----~l~s~~~dg~v~vw~~~~~~~--~~~~~~~-----~~~v~~~~~~~-~~~~l~~~~~ 79 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDS-----KVASVSRDGTVRLWSKDDQWL--GTVVYTG-----QGFLNSVCYDS-EKELLLFGGK 79 (313)
T ss_dssp ECCCSSCEEEEEE-EETT-----EEEEEETTSEEEEEEESSSEE--EEEEEEC-----SSCEEEEEEET-TTTEEEEEET
T ss_pred hhCCCCCcEEEEe-cCCC-----EEEEEEcCCcEEEEECCCCEE--EEEeecC-----CccEEEEEECC-CCCEEEEecC
Confidence 4579999999999 8887 788877 5 999999976542 2233333 37899999998 9999999999
Q ss_pred CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
||.|++|++...... .....+.+|...|.+++| ++ +.+++++.|+.|++|| ..+..... ..+.
T Consensus 80 dg~i~~~~~~~~~~~--------~~~~~~~~~~~~i~~~~~--~~---~~l~~~~~d~~i~~~d--~~~~~~~~--~~~~ 142 (313)
T 3odt_A 80 DTMINGVPLFATSGE--------DPLYTLIGHQGNVCSLSF--QD---GVVISGSWDKTAKVWK--EGSLVYNL--QAHN 142 (313)
T ss_dssp TSCEEEEETTCCTTS--------CC-CEECCCSSCEEEEEE--ET---TEEEEEETTSEEEEEE--TTEEEEEE--ECCS
T ss_pred CCeEEEEEeeecCCC--------CcccchhhcccCEEEEEe--cC---CEEEEEeCCCCEEEEc--CCcEEEec--ccCC
Confidence 999999998875432 222567889999999999 34 6999999999999999 32232222 3577
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
..+.+++|.|.++.++++++.|+ .|++||. ......+.. |...+.+++|+|++. +++++.||.|++||++.
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~-~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~-- 214 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADK-TIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT-- 214 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTS-CEEEEET---TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTT--
T ss_pred CceeEEEEccCCCCEEEEEECCC-CEEEEec---CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCc--
Confidence 89999999987899999999999 5999994 566777776 899999999999987 88999999999999987
Q ss_pred CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.+++..+..|...|++++|+|++ .+++++.|+.|++|++
T Consensus 215 ---~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 215 ---GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp ---CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred ---hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 45678889999999999999999 5999999999999985
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.3e-33 Score=234.94 Aligned_cols=282 Identities=12% Similarity=0.168 Sum_probs=198.7
Q ss_pred eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688 16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL 94 (349)
Q Consensus 16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 94 (349)
+..+..+ .+|++++|+| ||++ ||+|+. + .++||+++. ++.... . +...+..+++.++++ .+
T Consensus 12 ~~~~~~h~~~V~~v~fs~--dg~~-la~g~~----~-~~~iw~~~~--~~~~~~--~-~~~~~~~~~~~~~~~-----~~ 73 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQ--DQSC-LILSTL----K-SFEIYNVHP--VAHIMS--Q-EMRHLSKVRMLHRTN-----YV 73 (355)
T ss_dssp -------CCCCCEEEECT--TSSE-EEEECS----S-EEEEEEETT--EEEEEE--E-ECSCCCEEEECTTSS-----EE
T ss_pred ccccccCCCceEEEEECC--CCCE-EEEEcC----C-EEEEEecCC--cceeee--e-ecCCeEEEEEcCCCC-----EE
Confidence 3333433 7999999999 9996 998875 4 478998763 222222 1 223588888998877 54
Q ss_pred -EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc-ceeeeecccCC
Q psy17688 95 -ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN-QVVGRVNSVSG 170 (349)
Q Consensus 95 -~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~ 170 (349)
++++ + .|++||+.+++... .+. +..+|.++.|++ + .++++ .|+.|++||+.+. +.+.
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~--~~~------~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~------- 134 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVS--RIK------VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRIT------- 134 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEE--EEE------CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSS-------
T ss_pred EEEECCccEEEEEECCCCcEEE--EEE------CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeE-------
Confidence 4444 5 99999998875322 222 225899999975 3 44444 4789999999987 5552
Q ss_pred ceeeeeeccCCceeeEEEecCCCCccEEEE-EcCCCcEEEEECCCCCce-------------e-eeeeCCCCCceeEEEE
Q psy17688 171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFAS-VGAEGSVRMFDLRHLEHS-------------T-IIYEDPQHTPLLRLAW 235 (349)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~~-------------~-~~~~~~~~~~v~~~~~ 235 (349)
.+.. +...+++++ . .+.++ |+.||.|++||+++++.. . ......|..+|.+++|
T Consensus 135 ----~~~~---~~~~~~~s~-~---~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~ 203 (355)
T 3vu4_A 135 ----DDIR---FGGVCEFSN-G---LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL 203 (355)
T ss_dssp ----CCEE---EEEEEEEET-T---EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEE
T ss_pred ----Eecc---CCceEEEEc-c---EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE
Confidence 2222 344556666 3 34443 689999999999975410 0 2223468899999999
Q ss_pred eCCCCCeEEEEeeCCcE-EEEEeccCCCcceeEee-c-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688 236 NKQDPNYLAMVAMNACE-VIILDVRVPCTPVARLN-N-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312 (349)
Q Consensus 236 ~~~~~~~l~~~~~d~~~-i~v~d~~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 312 (349)
+| ++.+|++|+.|+ + |++||+++ ++.+..+. + |...|++++|+|++++ |++++.|+.|++||++.........
T Consensus 204 s~-~g~~l~s~s~d~-~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~-l~s~s~d~~v~iw~~~~~~~~~~~~ 279 (355)
T 3vu4_A 204 NR-KSDMVATCSQDG-TIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKRHA 279 (355)
T ss_dssp CT-TSSEEEEEETTC-SEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCE-EEEEETTCEEEEEESSCCSCCCSEE
T ss_pred CC-CCCEEEEEeCCC-CEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCE-EEEEECCCEEEEEEccCCCCccccc
Confidence 99 999999999999 8 99999997 88888887 5 9999999999999998 9999999999999997643211100
Q ss_pred ---------------EEEEec---cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 313 ---------------ILAYTA---AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 313 ---------------~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...+.. +......++|++++..+++++.||.+++|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 280 LKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp TTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred ccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 011111 1223467999999999999999999999974
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=239.54 Aligned_cols=245 Identities=13% Similarity=0.166 Sum_probs=193.2
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCch-hheeccC---------------------------------
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETR-LECILNN--------------------------------- 119 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~-~~~~~~~--------------------------------- 119 (349)
.++.+++|+|+++ +|+++.+ .|++||+.+++.. .......
T Consensus 5 ~p~~~v~~s~dg~-----~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-----LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp CCCCEEEECSSSS-----EEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred ccEEEEEecCCCC-----EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 4789999999998 7777776 9999998876500 0000110
Q ss_pred ----------------CCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEecc--CcceeeeecccCCceeeeee--c
Q psy17688 120 ----------------NKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLE--TNQVVGRVNSVSGHVKTQLI--A 178 (349)
Q Consensus 120 ----------------~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~--~ 178 (349)
+....+...|.+++|+| ++++| ++|+.||.|++||+. +++.. ..+. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~-----------~~~~~~~ 147 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVL-----------KLRKRFC 147 (450)
T ss_dssp --------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCE-----------EEEEEEE
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCcee-----------eeeeccc
Confidence 00112344799999998 88885 899999999999998 77665 3343 5
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCC---CCeEEEEeeCCcEE
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQD---PNYLAMVAMNACEV 253 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~~i 253 (349)
|...|.+++|+|++ ++|++++.+|.+++||+.+.+... ......+...|.+++|+| + +.+|++|+.|+ .|
T Consensus 148 ~~~~v~~~~~sp~~---~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~-~i 222 (450)
T 2vdu_B 148 FSKRPNAISIAEDD---TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDE-HI 222 (450)
T ss_dssp CSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTS-CE
T ss_pred CCCCceEEEEcCCC---CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCC-cE
Confidence 67889999999999 899999999999999998866432 111124678999999999 7 88999999999 59
Q ss_pred EEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--------------
Q psy17688 254 IILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------- 318 (349)
Q Consensus 254 ~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------- 318 (349)
++||++. +..+.. +.+|...|++++|+ ++.+ |++++.|+.|++||++++ +++..+..
T Consensus 223 ~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~-l~s~~~d~~v~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 223 KISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYL-LLSAGGDDKIFAWDWKTG-----KNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp EEEEESC-TTCEEEECCCCSSCEEEEEEC-STTE-EEEEESSSEEEEEETTTC-----CEEEEEECHHHHGGGCCTTSBC
T ss_pred EEEECCC-CceeeeeecCCCCceEEEEEC-CCCE-EEEEeCCCeEEEEECCCC-----cEeeeecchhhhhhhhhhcccc
Confidence 9999987 666666 56899999999999 9988 999999999999999874 33444442
Q ss_pred -----------cCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688 319 -----------AGGEINQIQWGATQPDWIAIC-YNKYLEVLRV 349 (349)
Q Consensus 319 -----------~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v 349 (349)
....|.+++|+|+++++++++ .++.|++|++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 235789999999999999988 7899999985
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=231.67 Aligned_cols=266 Identities=10% Similarity=0.102 Sum_probs=189.7
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc-
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET- 111 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~- 111 (349)
++.+ |++|+. ||.|++|++.. ++...... ...|.++.|+|+ +++++ | .|++|+......
T Consensus 47 d~~~-l~sg~~----Dg~v~iwd~~~--~~~~~~~~---~~~v~~~~~~~~--------~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 47 DKWV-CMCRCE----DGALHFTQLKD--SKTITTIT---TPNPRTGGEHPA--------IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp EEEE-EEEEEE----TTEEEEEEESS--SSCEEEEE---EECCCTTCCCCS--------EEEECSTTEEEEEETTTEEEE
T ss_pred CCCE-EEEECC----CCcEEEEECCC--CcEEEEEe---cCCceeeeeCCc--------eEEecCCCeEEEEEccCceEE
Confidence 7774 999999 99999998863 33332221 346777777765 44555 6 999998764210
Q ss_pred ---hhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee-eccCCceeeE
Q psy17688 112 ---RLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL-IAHDKEVYDI 186 (349)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 186 (349)
.....+..+. ..+..+|.+++|+| .+++++++|+.||.|++||+++++.. ... ..|...+.++
T Consensus 109 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~-----------~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 109 LDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY-----------IVHSAKSDVEYSSG 176 (343)
T ss_dssp EETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-----------EEECCCSSCCCCEE
T ss_pred eecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-----------EEEecCCCCceEEE
Confidence 0000011111 12336899999986 26789999999999999999988875 233 3455679999
Q ss_pred EEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee
Q psy17688 187 AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA 266 (349)
Q Consensus 187 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~ 266 (349)
+|+|++ .+|++|+.||.|++||+++++.........|..+|.+++|+| ++.+|++++ ++ .|++||+++ .+.+.
T Consensus 177 ~~~pdg---~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~-~v~iwd~~~-~~~~~ 249 (343)
T 3lrv_A 177 VLHKDS---LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQ-TVVCFDLRK-DVGTL 249 (343)
T ss_dssp EECTTS---CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SS-BEEEEETTS-STTCB
T ss_pred EECCCC---CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CC-eEEEEEcCC-CCcce
Confidence 999999 899999999999999999987652233334789999999999 999999999 55 599999997 55544
Q ss_pred Eeec---CCcceE--EEEEeeCCCCEEEEEcC-CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC---CCCceEE
Q psy17688 267 RLNN---HRACVN--GIAWAPHSSCHICTAGD-DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA---TQPDWIA 337 (349)
Q Consensus 267 ~~~~---~~~~v~--~~~~~p~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~ 337 (349)
.+.. |...+. +++|+|++++ |++++. |+.+++|++...... ... .++..+.|.+ +...+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~ 319 (343)
T 3lrv_A 250 AYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDKKTKN-----WTK----DEESALCLQSDTADFTDMDV 319 (343)
T ss_dssp SSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCS-----EEE----EEEEECCC----CCCCEEEE
T ss_pred eecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEcccccc-----eEe----cCceeEecCccccccceeEE
Confidence 4433 444444 6999999998 888887 999999999764321 111 4677888888 7777888
Q ss_pred EEcCCeEEEe
Q psy17688 338 ICYNKYLEVL 347 (349)
Q Consensus 338 ~~~d~~v~vw 347 (349)
++.|+.+.++
T Consensus 320 ~~~d~~~~~~ 329 (343)
T 3lrv_A 320 VCGDGGIAAI 329 (343)
T ss_dssp EEETTEEEEE
T ss_pred EecCCceEEE
Confidence 8888888775
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.5e-31 Score=215.72 Aligned_cols=298 Identities=10% Similarity=0.108 Sum_probs=196.0
Q ss_pred CccccceeeeeecCC-----ceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEE
Q psy17688 9 PPTTQKEIYKYEAPW-----PLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIM 81 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~ 81 (349)
.+...+.+.+++.+. .+.++-|-. .+. +..+++++ +..|.+|+.... -+.... ....|+.+|..+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~ 93 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGSCSVDVSAMFWER-AGCKEPCIITAC-----EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIV 93 (356)
T ss_dssp ---CEEEEEEECCCCSSCEEEEEEEEEC-----CEEEEEEEE-----SSEEEEEEESSS-SBEEEEEEEECCSSCEEEEC
T ss_pred CcceeeeeehhcCCCCCeEEEEeeeeecc-CCCCccEEEEec-----cceEEEcccCCC-ccceeeEEEeccCceeEEEE
Confidence 345556677777774 344555543 233 33455554 688999987643 222222 2346788999999
Q ss_pred EecCCCCCCCcEEEEeCC--cEEEEECCCCCc--h-hheeccCCCCCCCcCceeEEEecCCCCCeEEEEE--cCCeEEEE
Q psy17688 82 WIPDRKGVFPDLLATSGD--YLRVWRAGEPET--R-LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS--IDTTCTIW 154 (349)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~--~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iw 154 (349)
+.||..++ +.++-++ .-.++.+.-... . ....... ++...|.++ + +++++.+++ .|+.|++|
T Consensus 94 ~~~~~~~~---~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~----g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~ 162 (356)
T 2w18_A 94 PVPDVYNL---VCVALGNLEIREIRALFCSSDDESEKQVLLKS----GNIKAVLGL---T-KRRLVSSSGTLSDQQVEVM 162 (356)
T ss_dssp CCTTCCSC---EEEEECSSSEEEEEEECC------CCEEEEEE----EEEEEEEEE---T-TTEEEEEESSSTTCEEEEE
T ss_pred EcCcccce---eeeeeccccccceEEEEECCCccccccEEEeC----CCeEEEEec---C-CCcEEEecccCCCCcEEEE
Confidence 99988753 4444443 222333221110 0 1111111 122344443 3 566666644 59999999
Q ss_pred eccC-cceeeeecccCCceeeeeeccCCceeeEEEec---CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-CCCc
Q psy17688 155 CLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR---AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-QHTP 229 (349)
Q Consensus 155 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~ 229 (349)
++.. ++.+ ..+..|...+..++|+| ++ ..|++++.|++|++||+++++....+.... +...
T Consensus 163 ~~s~dG~~~-----------~s~~~~~~~v~~l~fs~~~g~~---~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 163 TFAEDGGGK-----------ENQFLMPPEETILTFAEVQGMQ---EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp EECTTSCEE-----------EEEEECCCSSCEEEEEEEETST---TEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred EECCCCcee-----------eeeccCCCceeeEEeeccCCCC---ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 9944 6655 56778999999999999 55 899999999999999999998776664321 2346
Q ss_pred eeEEEEeCCCCCeE------------EEEeeCCcEEEEEeccCCCcceeEe-----ecCCcceEEEEEeeCCCCEEEEEc
Q psy17688 230 LLRLAWNKQDPNYL------------AMVAMNACEVIILDVRVPCTPVARL-----NNHRACVNGIAWAPHSSCHICTAG 292 (349)
Q Consensus 230 v~~~~~~~~~~~~l------------~~~~~d~~~i~v~d~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~~l~~~~ 292 (349)
+.+++|+| ++.++ ++|+.|+ +|++||..+ ++.+..+ .+|...+.+..++ +.. +++++
T Consensus 229 v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~-tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~-lASgS 302 (356)
T 2w18_A 229 VCHKAYSE-MGLLFIVLSHPCAKESESLRSPVF-QLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHC-AAAIL 302 (356)
T ss_dssp CEEEEEEE-TTEEEEEEC------------CCE-EEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTE-EEEEE
T ss_pred eEEEEECC-CCCEEEEeccCCCcceeeccCCCc-EEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCE-EEEEc
Confidence 77889999 78776 5677888 799999987 7666554 3666655444444 666 99999
Q ss_pred CCCcEEEEEeecCCCCCCCcEEEEeccCCceE-EEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 293 DDHQALIWDIQQMPRAIEDPILAYTAAGGEIN-QIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 293 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.|++|+|||+.+ .+.+..+.+|...+. .++|+|+|++|++++.|++|+||++
T Consensus 303 ~DgTIkIWDl~t-----Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLL-----GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTT-----CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCC-----CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999998 456788888877655 5899999999999999999999984
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.9e-31 Score=232.64 Aligned_cols=285 Identities=8% Similarity=0.034 Sum_probs=217.6
Q ss_pred ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc----eEecCCCCeeEEEEecCCCCC
Q psy17688 14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK----STIDHPYPTTKIMWIPDRKGV 89 (349)
Q Consensus 14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~ 89 (349)
+.+..+..+..+.+++|+| ++.+ +++++. ++.|++|++.. ++.... ...+|...|.+++|+|++.
T Consensus 114 ~~~~~~~~~~~~~~~~~s~--~~~~-~~~~~~----~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 182 (433)
T 3bws_A 114 RFISRFKTGFQPKSVRFID--NTRL-AIPLLE----DEGMDVLDINS--GQTVRLSPPEKYKKKLGFVETISIPEHNE-- 182 (433)
T ss_dssp EEEEEEECSSCBCCCEESS--SSEE-EEEBTT----SSSEEEEETTT--CCEEEECCCHHHHTTCCEEEEEEEGGGTE--
T ss_pred eEEEEEcCCCCceEEEEeC--CCeE-EEEeCC----CCeEEEEECCC--CeEeeecCcccccccCCceeEEEEcCCCE--
Confidence 5566666777788999998 7774 777766 88999998763 333321 1126788999999999987
Q ss_pred CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeec
Q psy17688 90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
++++++ + .|++||+++.+.. ..+..+ ...+.+++|+| +++.+ ++++.|+.|++||+++++..
T Consensus 183 ---~~~s~~~d~~v~~~d~~~~~~~--~~~~~~-----~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~---- 247 (433)
T 3bws_A 183 ---LWVSQMQANAVHVFDLKTLAYK--ATVDLT-----GKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEI---- 247 (433)
T ss_dssp ---EEEEEGGGTEEEEEETTTCCEE--EEEECS-----SSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEE----
T ss_pred ---EEEEECCCCEEEEEECCCceEE--EEEcCC-----CCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEE----
Confidence 888887 4 9999999876432 222222 36789999998 77766 45558999999999988776
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc--------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG--------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ 238 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 238 (349)
..+.. ...+.+++|+|++ +.+++++ .|+.|++||+++++..... .+...+.+++|+|
T Consensus 248 -------~~~~~-~~~~~~~~~~~~g---~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~- 312 (433)
T 3bws_A 248 -------RKTDK-IGLPRGLLLSKDG---KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPPGNKRHIVSGN- 312 (433)
T ss_dssp -------EECCC-CSEEEEEEECTTS---SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEEECEEEEEECS-
T ss_pred -------EEecC-CCCceEEEEcCCC---CEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCCCCcceEEECC-
Confidence 33333 3458999999999 7888877 5889999999987654443 2335788999999
Q ss_pred CCC-eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC---------------CCcEEEEEe
Q psy17688 239 DPN-YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD---------------DHQALIWDI 302 (349)
Q Consensus 239 ~~~-~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---------------d~~v~iwd~ 302 (349)
+++ ++++++.++ .|++||+.+ ++.+..+. +...+.+++|+|++++ |++++. ||.|++||+
T Consensus 313 ~g~~l~~~~~~~~-~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 313 TENKIYVSDMCCS-KIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp STTEEEEEETTTT-EEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred CCCEEEEEecCCC-EEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEEC
Confidence 665 556668888 699999986 66666665 6778999999999998 666654 579999999
Q ss_pred ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688 303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV 349 (349)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v 349 (349)
.+. +.+..+.. ...+.+++|+|++++|++++. |+.|++|++
T Consensus 389 ~~~-----~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 389 TTD-----TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp TTT-----EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCC-----cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 873 34555665 568999999999998888876 899999985
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-31 Score=219.30 Aligned_cols=244 Identities=14% Similarity=0.240 Sum_probs=192.4
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..|++++|+| ++++ ||+|+. ||.|++|++.. ++... ...+|...+.++.+. +. ++++++ + .
T Consensus 68 ~~V~~v~~~~--~~~~-l~sgs~----Dg~v~iw~~~~--~~~~~-~~~~h~~~~~~~~~~--~~-----~l~s~~~~~~ 130 (318)
T 4ggc_A 68 EYISSVAWIK--EGNY-LAVGTS----SAEVQLWDVQQ--QKRLR-NMTSHSARVGSLSWN--SY-----ILSSGSRSGH 130 (318)
T ss_dssp CCEEEEEECT--TSSE-EEEEET----TSEEEEEETTT--TEEEE-EEECCSSCEEEEEEE--TT-----EEEEEETTSE
T ss_pred CeEEEEEECC--CCCE-EEEEEC----CCcEEEeecCC--ceeEE-EecCccceEEEeecC--CC-----EEEEEecCCc
Confidence 6799999999 9996 999998 99999998863 44333 245788887776554 44 788877 4 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++|+....... ...+..|. ..+..+.|++ ++.+|++++.||.|++||+++++... ........+.
T Consensus 131 ~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~-------~~~~~~~~~~ 196 (318)
T 4ggc_A 131 IHHHDVRVAEHH-VATLSGHS-----QEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGW-------VPLQTFTQHQ 196 (318)
T ss_dssp EEEEETTSSSCE-EEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBS-------CCSEEECCCC
T ss_pred eEeeecCCCcee-EEEEcCcc-----CceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccc-------cceeeecccC
Confidence 999998775432 22333333 7888999987 89999999999999999999876542 1224556788
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEec
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDV 258 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~ 258 (349)
..|..++++|.+...-.+++++.++.|++||.+........ .+...+..+.|+| .+..+++++ .|+ .|++||+
T Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~~~sg~~d~-~i~iwd~ 271 (318)
T 4ggc_A 197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV---DAHSQVCSILWSP-HYKELISGHGFAQN-QLVIWKY 271 (318)
T ss_dssp SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE---ECSSCEEEEEEET-TTTEEEEEECTTTC-CEEEEET
T ss_pred CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc---cceeeeeeeeecc-cccceEEEEEcCCC-EEEEEEC
Confidence 89999999998741123356778999999999987654433 3567899999999 777666554 688 5999999
Q ss_pred cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
++ ++++.++.+|.+.|++++|+|++++ |++|+.||+|+|||+..
T Consensus 272 ~~-~~~~~~l~gH~~~V~~l~~spdg~~-l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 272 PT-MAKVAELKGHTSRVLSLTMSPDGAT-VASAAADETLRLWRCFE 315 (318)
T ss_dssp TT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTTEEEEECCSC
T ss_pred CC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEecCCeEEEEECCC
Confidence 98 8899999999999999999999999 99999999999999976
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.3e-31 Score=227.24 Aligned_cols=294 Identities=13% Similarity=0.199 Sum_probs=191.3
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D 99 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~ 99 (349)
...+|++++|+| .++.+ |++++. +|.|++|++.. ++.. ....+...+.++.|+|.+.. ..++++++ +
T Consensus 98 ~~~~v~~~~~~~-~~~~~-l~s~~~----d~~i~iwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 165 (408)
T 4a11_B 98 HRYSVETVQWYP-HDTGM-FTSSSF----DKTLKVWDTNT--LQTA--DVFNFEETVYSHHMSPVSTK--HCLVAVGTRG 165 (408)
T ss_dssp CSSCEEEEEECT-TCTTC-EEEEET----TSEEEEEETTT--TEEE--EEEECSSCEEEEEECSSCSS--CCEEEEEESS
T ss_pred CCCcEEEEEEcc-CCCcE-EEEEeC----CCeEEEeeCCC--Cccc--eeccCCCceeeeEeecCCCC--CcEEEEEcCC
Confidence 447999999998 23454 899988 99999998863 3322 23457889999999996531 11666666 5
Q ss_pred -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCccee-eeecccC----Cce
Q psy17688 100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVV-GRVNSVS----GHV 172 (349)
Q Consensus 100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~----~~~ 172 (349)
.|++||+.+++. ...+.. |...|.+++|+| ++. +|++|+.||.|++||+++.... ..+.... ...
T Consensus 166 ~~v~~~d~~~~~~--~~~~~~-----~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 166 PKVQLCDLKSGSC--SHILQG-----HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp SSEEEEESSSSCC--CEEECC-----CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred CeEEEEeCCCcce--eeeecC-----CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceee
Confidence 999999987642 223333 337899999998 655 6999999999999999876522 1111100 011
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC--CCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ--HTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
......|...|.+++|+|++ ++|++++.||.|++||+++++.......... ......+.+.......+++++.++
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDG---LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred ccccccccCceeEEEEcCCC---CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence 12336788999999999998 8999999999999999998765433221111 111122223332567777888889
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
.|++||+.+ ++++..+.+|...|++++|+|++++ |++++.||.|++||++..+. +..... .-....+.+
T Consensus 315 -~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iw~~~~~~~-----~~~~~~---~~~~~~~~~ 383 (408)
T 4a11_B 315 -TIAVYTVYS-GEQITMLKGHYKTVDCCVFQSNFQE-LYSGSRDCNILAWVPSLYEP-----VPDDDE---TTTKSQLNP 383 (408)
T ss_dssp -EEEEEETTT-CCEEEEECCCSSCEEEEEEETTTTE-EEEEETTSCEEEEEECC--------------------------
T ss_pred -EEEEEECcC-CcceeeeccCCCeEEEEEEcCCCCE-EEEECCCCeEEEEeCCCCCc-----cCCCCc---eEecccccc
Confidence 699999997 8889999999999999999999998 99999999999999998443 222222 112233444
Q ss_pred -CCCceEEEEcCCeEEEee
Q psy17688 331 -TQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 331 -~~~~l~~~~~d~~v~vw~ 348 (349)
....+.+.+.++.+++|+
T Consensus 384 ~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 384 AFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp -------------------
T ss_pred ccceeecccCccCceeecC
Confidence 223345566689999996
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.9e-31 Score=225.11 Aligned_cols=231 Identities=12% Similarity=0.130 Sum_probs=177.9
Q ss_pred ecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcC
Q psy17688 71 IDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSID 148 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~d 148 (349)
..|...|++++|+|+++ +|++|++ .+++|+++..... ...+. ..+..+++.+ +++.+ ++++.|
T Consensus 16 ~~h~~~V~~v~fs~dg~-----~la~g~~~~~~iw~~~~~~~~----~~~~~-----~~~~~~~~~~-~~~~~~~~~~~d 80 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQS-----CLILSTLKSFEIYNVHPVAHI----MSQEM-----RHLSKVRMLH-RTNYVAFVTGVK 80 (355)
T ss_dssp ---CCCCCEEEECTTSS-----EEEEECSSEEEEEEETTEEEE----EEEEC-----SCCCEEEECT-TSSEEEEECSST
T ss_pred ccCCCceEEEEECCCCC-----EEEEEcCCEEEEEecCCccee----eeeec-----CCeEEEEEcC-CCCEEEEEECCc
Confidence 46889999999999998 9999986 8899998765321 11111 2356677776 55555 678888
Q ss_pred CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-CceeeeeeCCCC
Q psy17688 149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQH 227 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~ 227 (349)
+.|++||+.+++.+ ..+. +..+|.+++++++. ++.+ .|+.|++||+++. +....+..
T Consensus 81 ~~v~iWd~~~~~~~-----------~~~~-~~~~v~~v~~~~~~-----~~~~-~~~~i~i~d~~~~~~~~~~~~~---- 138 (355)
T 3vu4_A 81 EVVHIWDDVKKQDV-----------SRIK-VDAPVKDLFLSREF-----IVVS-YGDVISVFKFGNPWKRITDDIR---- 138 (355)
T ss_dssp TEEEEEETTTTEEE-----------EEEE-CSSCEEEEEECSSE-----EEEE-ETTEEEEEESSTTCCBSSCCEE----
T ss_pred cEEEEEECCCCcEE-----------EEEE-CCCceEEEEEcCCE-----EEEE-EcCEEEEEECCCCceeeEEecc----
Confidence 99999999998887 3443 66789999998754 3333 3789999999987 44333321
Q ss_pred CceeEEEEeCCCCCeEEE--EeeCCcEEEEEeccCCC--------------cc-eeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688 228 TPLLRLAWNKQDPNYLAM--VAMNACEVIILDVRVPC--------------TP-VARLNNHRACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~--~~~d~~~i~v~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~p~~~~~l~~ 290 (349)
+...+++++ .++++ |+.+| .|++||++... .+ +..+.+|.+.|++++|+|++++ |++
T Consensus 139 -~~~~~~~s~---~~la~~sg~~~g-~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s 212 (355)
T 3vu4_A 139 -FGGVCEFSN---GLLVYSNEFNLG-QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VAT 212 (355)
T ss_dssp -EEEEEEEET---TEEEEEESSCTT-CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEE
T ss_pred -CCceEEEEc---cEEEEeCCCcCc-EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEE
Confidence 445566776 56666 57888 59999998622 12 7888999999999999999998 999
Q ss_pred EcCCCc-EEEEEeecCCCCCCCcEEEEe-c-cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 291 AGDDHQ-ALIWDIQQMPRAIEDPILAYT-A-AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 291 ~~~d~~-v~iwd~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|+.|++ |++||+++ .+++..+. + |...|.+++|+|++++|++++.|+.|++|++
T Consensus 213 ~s~d~~~v~iwd~~~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 213 CSQDGTIIRVFKTED-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EETTCSEEEEEETTT-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EeCCCCEEEEEECCC-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 999998 99999998 44577787 5 8999999999999999999999999999985
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=231.01 Aligned_cols=231 Identities=9% Similarity=0.071 Sum_probs=172.5
Q ss_pred EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
++++|+ | .|++||+.+++... .+. ...|.++.|+| . +++++.|+.|++|+.......... ...
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~--~~~-------~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~--~~~ 114 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTIT--TIT-------TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDS--KTN 114 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEE--EEE-------EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEET--TTC
T ss_pred EEEEECCCCcEEEEECCCCcEEE--EEe-------cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeec--CCc
Confidence 888888 6 99999998875322 222 14677788877 4 999999999999987743322111 111
Q ss_pred ceeee-eeccCCceeeEEEec--CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 171 HVKTQ-LIAHDKEVYDIAFSR--AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 171 ~~~~~-~~~~~~~v~~~~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
..... ...|..+|.+++|+| ++ +++++++.||.|++||+++++.... ....+...+.+++|+| ++.+|++|+
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~-~~~~~~~~i~~~~~~p-dg~~lasg~ 189 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNT---EYFIWADNRGTIGFQSYEDDSQYIV-HSAKSDVEYSSGVLHK-DSLLLALYS 189 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---C---CEEEEEETTCCEEEEESSSSCEEEE-ECCCSSCCCCEEEECT-TSCEEEEEC
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCC---CEEEEEeCCCcEEEEECCCCcEEEE-EecCCCCceEEEEECC-CCCEEEEEc
Confidence 21122 236778899999999 88 8999999999999999998776333 2334556799999999 999999999
Q ss_pred eCCcEEEEEeccCCCcce-eEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce--
Q psy17688 248 MNACEVIILDVRVPCTPV-ARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI-- 323 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v-- 323 (349)
.|+ .|++||+++ ++.+ ..+.. |.++|++++|+|++.+ |++++ |+.|++||++...... .+..+..|...+
T Consensus 190 ~dg-~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~-l~s~~-~~~v~iwd~~~~~~~~--~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 190 PDG-ILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYW-MVVEC-DQTVVCFDLRKDVGTL--AYPTYTIPEFKTGT 263 (343)
T ss_dssp TTS-CEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSE-EEEEE-SSBEEEEETTSSTTCB--SSCCCBC-----CC
T ss_pred CCC-EEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCE-EEEEe-CCeEEEEEcCCCCcce--eecccccccccccc
Confidence 999 599999998 5555 77887 9999999999999998 88888 5599999999854321 111222233334
Q ss_pred EEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688 324 NQIQWGATQPDWIAICY-NKYLEVLRV 349 (349)
Q Consensus 324 ~~~~~~~~~~~l~~~~~-d~~v~vw~v 349 (349)
.+++|+|++++|++++. |+.+++|++
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 36999999999999888 999999963
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-30 Score=226.68 Aligned_cols=230 Identities=16% Similarity=0.340 Sum_probs=193.4
Q ss_pred cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688 72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT 149 (349)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 149 (349)
+|...|.++.| +++ ++++|+ | .|++||+.+.+. ...+.+| ...|.+++| ++++|++|+.||
T Consensus 131 ~~~~~v~~~~~--d~~-----~l~~g~~dg~i~iwd~~~~~~--~~~~~~h-----~~~v~~l~~---~~~~l~sg~~dg 193 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQ-----KIVSGLRDNTIKIWDKNTLEC--KRILTGH-----TGSVLCLQY---DERVIITGSSDS 193 (435)
T ss_dssp SSCCCEEEEEC--CSS-----EEEEEESSSCEEEEESSSCCE--EEEECCC-----SSCEEEEEC---CSSEEEEEETTS
T ss_pred CCCCcEEEEEE--CCC-----EEEEEeCCCeEEEEeCCCCeE--EEEEcCC-----CCcEEEEEE---CCCEEEEEcCCC
Confidence 46677999887 565 777777 5 999999987652 2334443 478999998 678999999999
Q ss_pred eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeCCCCC
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHT 228 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~ 228 (349)
.|++||+.+++.. ..+.+|...|.+++|++ ..+++++.||.|++||+++++.... .....+..
T Consensus 194 ~i~vwd~~~~~~~-----------~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 257 (435)
T 1p22_A 194 TVRVWDVNTGEML-----------NTLIHHCEAVLHLRFNN-----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 257 (435)
T ss_dssp CEEEEESSSCCEE-----------EEECCCCSCEEEEECCT-----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred eEEEEECCCCcEE-----------EEEcCCCCcEEEEEEcC-----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC
Confidence 9999999998877 67788999999999963 5899999999999999998765422 23346778
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~ 308 (349)
.|.+++| ++.++++|+.|+ .|++||+++ ++.+..+.+|...|.++.|+ +.+ +++|+.||.|++||+++
T Consensus 258 ~v~~~~~---~~~~l~s~~~dg-~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~-l~~g~~dg~i~iwd~~~---- 325 (435)
T 1p22_A 258 AVNVVDF---DDKYIVSASGDR-TIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIEC---- 325 (435)
T ss_dssp CEEEEEE---ETTEEEEEETTS-EEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTE-EEEEETTSCEEEEETTT----
T ss_pred cEEEEEe---CCCEEEEEeCCC-eEEEEECCc-CcEEEEEcCCCCcEEEEEeC--CCE-EEEEeCCCeEEEEECCC----
Confidence 9999999 568999999999 699999998 88899999999999999985 566 99999999999999988
Q ss_pred CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..++..+.+|...|.+++| ++..+++++.||.|++|++
T Consensus 326 -~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 326 -GACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp -CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred -CCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 4567889999999999999 6678999999999999984
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.8e-30 Score=219.19 Aligned_cols=244 Identities=12% Similarity=0.169 Sum_probs=191.9
Q ss_pred ecCCCCeeEEEEecCC---CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688 71 IDHPYPTTKIMWIPDR---KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS 145 (349)
Q Consensus 71 ~~~~~~v~~~~~~~~~---~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (349)
.+|...|++++|+|++ + +|++++ | .|++|++.+........+..|. ..|++++|+| ++++|+++
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s~ 104 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGN-----FLIAGSWANDVRCWEVQDSGQTIPKAQQMHT-----GPVLDVCWSD-DGSKVFTA 104 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSE-----EEEEEETTSEEEEEEECTTSCEEEEEEEECS-----SCEEEEEECT-TSSEEEEE
T ss_pred cCCCCceEEEEEcCCCCCce-----EEEEECCCCcEEEEEcCCCCceeEEEecccc-----CCEEEEEECc-CCCEEEEE
Confidence 4799999999999994 6 888877 5 9999999874433333444444 7899999998 99999999
Q ss_pred EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE--ecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF--SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
+.||.|++||+.+++.. .+..|...|.+++| +|++ .+|++++.||.|++||+++++....+.
T Consensus 105 ~~dg~v~iwd~~~~~~~------------~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~- 168 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAI------------QIAQHDAPVKTIHWIKAPNY---SCVMTGSWDKTLKFWDTRSSNPMMVLQ- 168 (368)
T ss_dssp ETTSEEEEEETTTTEEE------------EEEECSSCEEEEEEEECSSC---EEEEEEETTSEEEEECSSCSSCSEEEE-
T ss_pred cCCCcEEEEEcCCCCce------------eeccccCceEEEEEEeCCCC---CEEEEccCCCcEEEEECCCCcEEEEEe-
Confidence 99999999999988875 35679999999999 7887 899999999999999999887655553
Q ss_pred CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCC---EEEEEcCCCcEEE
Q psy17688 224 DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSC---HICTAGDDHQALI 299 (349)
Q Consensus 224 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~---~l~~~~~d~~v~i 299 (349)
....+.++.+.+ ..+++++.++ .+.+||++.......... .+...+.++.+.++... .+++++.||.|++
T Consensus 169 --~~~~~~~~~~~~---~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 169 --LPERCYCADVIY---PMAVVATAER-GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp --CSSCEEEEEEET---TEEEEEEGGG-CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred --cCCCceEEEecC---CeeEEEeCCC-cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 234677777664 5788888888 599999987444333332 23455667777665432 3889999999999
Q ss_pred EEeecCCCCCCCcEEEEeccCC------------ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 300 WDIQQMPRAIEDPILAYTAAGG------------EINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 300 wd~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
||++.... ..++..+..|.. .|++++|+|++++|++++.|+.|++|++
T Consensus 243 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 243 HYINPPNP--AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp EESSCSCH--HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred EecCCCCc--cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 99987432 124566677655 7999999999999999999999999985
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.4e-30 Score=222.53 Aligned_cols=290 Identities=11% Similarity=0.017 Sum_probs=214.6
Q ss_pred CCceeeEE---EeecCCCceEEEEEeeec----------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688 22 PWPLYSMN---WSVRPDKLFRLAIGSYVE----------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 22 ~~~v~~~~---~sp~~~~~~~la~g~~~~----------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
...++.++ |+| +++. +++.+... ..++.+.||.++...+.......+.....+.+++|+|++.
T Consensus 60 ~~g~~~~~~p~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~- 135 (433)
T 3bws_A 60 NIALVEMAIPVYKD--EKEI-ELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTR- 135 (433)
T ss_dssp TEEEEEEEEECCCT--TCCE-EEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSE-
T ss_pred CCccEEEEEeeccC--CCcE-EEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCe-
Confidence 45778888 888 6663 44333211 1133346676665544434444445556788999999655
Q ss_pred CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
++++++ + .|++||+.+++.. ..........|...|.+++|++ ++.++++++.|+.|++||+++++..
T Consensus 136 ----~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~---- 204 (433)
T 3bws_A 136 ----LAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYK---- 204 (433)
T ss_dssp ----EEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEE----
T ss_pred ----EEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEE----
Confidence 777776 4 8999999876532 1111111123447899999987 8899999999999999999988776
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM 245 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 245 (349)
..+..|...+.+++|+|++ +.+ ++++.|+.|++||+++++....+ .....+.+++|+| ++.++++
T Consensus 205 -------~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~-~g~~l~~ 270 (433)
T 3bws_A 205 -------ATVDLTGKWSKILLYDPIR---DLVYCSNWISEDISVIDRKTKLEIRKT---DKIGLPRGLLLSK-DGKELYI 270 (433)
T ss_dssp -------EEEECSSSSEEEEEEETTT---TEEEEEETTTTEEEEEETTTTEEEEEC---CCCSEEEEEEECT-TSSEEEE
T ss_pred -------EEEcCCCCCeeEEEEcCCC---CEEEEEecCCCcEEEEECCCCcEEEEe---cCCCCceEEEEcC-CCCEEEE
Confidence 5567888899999999998 555 66668999999999987654333 3456799999999 8888888
Q ss_pred Ee--------eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688 246 VA--------MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT 317 (349)
Q Consensus 246 ~~--------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 317 (349)
++ .|+ .|++||+++ ++.+..+ .|...+.+++|+|+++.++++++.|+.|++||+.+. +.+..+.
T Consensus 271 ~~~~~~~~~~~dg-~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~ 342 (433)
T 3bws_A 271 AQFSASNQESGGG-RLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK-----KVQKSIP 342 (433)
T ss_dssp EEEESCTTCSCCE-EEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-----EEEEEEE
T ss_pred EECCCCccccCCC-eEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-----cEEEEec
Confidence 88 477 699999986 5555544 456688999999999876788899999999999863 2344444
Q ss_pred ccCCceEEEEEcCCCCceEEEEc---------------CCeEEEeeC
Q psy17688 318 AAGGEINQIQWGATQPDWIAICY---------------NKYLEVLRV 349 (349)
Q Consensus 318 ~~~~~v~~~~~~~~~~~l~~~~~---------------d~~v~vw~v 349 (349)
+...+.+++|+|+++.+++++. ||.|++|++
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 5778999999999998888776 469999984
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-31 Score=230.14 Aligned_cols=271 Identities=10% Similarity=0.052 Sum_probs=192.9
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D- 99 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~- 99 (349)
+..|++++|+| +| . ++.+.+|+.+ +.... ...|...|.+++|+|+|. .||+++ +
T Consensus 52 ~~~v~~V~FsP--dg--------~----~~~~~~~~~~---~~~~~--~~~~~~~V~~vawSPdG~-----~LAs~s~dg 107 (588)
T 2j04_A 52 SKNLFHVKEFP--LE--------F----ENKLDFELAQ---QNGLL--NSQPVCYPRVCKPSPIDD-----WMAVLSNNG 107 (588)
T ss_dssp GGGTEEEEEEC--CC--------C----CCTTTTSCCC---SSCSS--TTSCSCCEEEEEECSSSS-----CEEEEETTS
T ss_pred CccEEEEEECC--CC--------C----cceEEEEeCC---CceEe--ecCCCCcEEEEEECCCCC-----EEEEEeCCC
Confidence 47899999998 88 2 5555566432 22221 224678899999999999 788877 5
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee---
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL--- 176 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--- 176 (349)
.|++|+.+. ....+. |........+.+++||| ++++||+|+.||+|++||+.++..... .-.....+
T Consensus 108 ~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~----~~i~l~ti~~~ 177 (588)
T 2j04_A 108 NVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTP----EFYFESSIRLS 177 (588)
T ss_dssp CEEEEETTE----EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCC----CCEEEEEEECS
T ss_pred cEEEEeCCc----eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccc----cceeeeeeecc
Confidence 999999543 222233 33222234699999998 999999999999999999998753000 00001343
Q ss_pred -eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 177 -IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 177 -~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
.+|...|.+++|+|++ +++++.|++|++||+..++... ......+...|.+++|+ ++.||+++ ++ .|
T Consensus 178 ~~gh~~~V~sVawSPdg-----Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~-tI 247 (588)
T 2j04_A 178 DAGSKDWVTHIVWYEDV-----LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PG-YV 247 (588)
T ss_dssp CTTCCCCEEEEEEETTE-----EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SS-EE
T ss_pred cccccccEEEEEEcCCc-----EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CC-eE
Confidence 6678899999999963 8889999999999998876421 11223566899999998 48888887 57 69
Q ss_pred EEEeccCCCcceeEeecCCcceEEEEE--eeCCCCEEEEEcCCCcEEEEEeecCCC------------------CCCCcE
Q psy17688 254 IILDVRVPCTPVARLNNHRACVNGIAW--APHSSCHICTAGDDHQALIWDIQQMPR------------------AIEDPI 313 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~~~~~d~~v~iwd~~~~~~------------------~~~~~~ 313 (349)
++||+.. ++......+|...|..+.| +|++.. |++++.||. ++|....... ....++
T Consensus 248 kLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~~-La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l 324 (588)
T 2j04_A 248 HKIDLKN-YSISSLKTGSLENFHIIPLNHEKESTI-LLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEF 324 (588)
T ss_dssp EEEETTT-TEEEEEECSCCSCCCEEEETTCSSCEE-EEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSS
T ss_pred EEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCCE-EEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCce
Confidence 9999986 4443333389999999999 999987 999999999 9998742110 001112
Q ss_pred EEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688 314 LAYTAAGGEINQIQWGATQPDWIAICY 340 (349)
Q Consensus 314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~ 340 (349)
..+.+ ...|.+++|+|+|+.+++++.
T Consensus 325 ~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 325 NNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred eeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 22233 456899999999986665543
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=3.5e-29 Score=215.34 Aligned_cols=262 Identities=10% Similarity=0.097 Sum_probs=197.5
Q ss_pred eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhe
Q psy17688 38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLEC 115 (349)
Q Consensus 38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~ 115 (349)
+.+++++. ++.|++|++. +++... .+.+...+.+++|+|+++. ++++++ + .|++||+.+++.. .
T Consensus 3 ~l~vs~~~----d~~v~v~d~~--~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~~~d~~i~v~d~~~~~~~--~ 68 (391)
T 1l0q_A 3 FAYIANSE----SDNISVIDVT--SNKVTA--TIPVGSNPMGAVISPDGTK----VYVANAHSNDVSIIDTATNNVI--A 68 (391)
T ss_dssp EEEEEETT----TTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE----EEEEEGGGTEEEEEETTTTEEE--E
T ss_pred EEEEEcCC----CCEEEEEECC--CCeEEE--EeecCCCcceEEECCCCCE----EEEECCCCCeEEEEECCCCeEE--E
Confidence 34777777 9999999886 344333 3344557999999999982 346664 5 9999999876532 2
Q ss_pred eccCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC
Q psy17688 116 ILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG 194 (349)
Q Consensus 116 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 194 (349)
.+..+ ..+.+++|+| +++.|+ +++.++.|++||+.+++.. ..+.. ...+.+++|+|++
T Consensus 69 ~~~~~------~~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~-----------~~~~~-~~~~~~~~~s~dg-- 127 (391)
T 1l0q_A 69 TVPAG------SSPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVA-----------GTVKT-GKSPLGLALSPDG-- 127 (391)
T ss_dssp EEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE-----------EEEEC-SSSEEEEEECTTS--
T ss_pred EEECC------CCccceEECC-CCCEEEEEECCCCEEEEEECCCCeEE-----------EEEeC-CCCcceEEECCCC--
Confidence 22221 3789999998 777665 5556799999999998876 33443 4568999999998
Q ss_pred ccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE-EEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688 195 RDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL-AMVAMNACEVIILDVRVPCTPVARLNNHR 272 (349)
Q Consensus 195 ~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~~i~v~d~~~~~~~~~~~~~~~ 272 (349)
+.+ ++++.++.|++||+++++....+. ....+..++|+| ++..+ ++++.++ .|++||+++ ++.+..+. +.
T Consensus 128 -~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~-dg~~l~~~~~~~~-~v~~~d~~~-~~~~~~~~-~~ 199 (391)
T 1l0q_A 128 -KKLYVTNNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTP-DGTKVYVANFDSM-SISVIDTVT-NSVIDTVK-VE 199 (391)
T ss_dssp -SEEEEEETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECT-TSSEEEEEETTTT-EEEEEETTT-TEEEEEEE-CS
T ss_pred -CEEEEEeCCCCEEEEEECCCCcEEEEEe---cCCCcceEEECC-CCCEEEEEeCCCC-EEEEEECCC-CeEEEEEe-cC
Confidence 555 788899999999999876554443 345679999999 77766 5667778 699999987 66666555 45
Q ss_pred cceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE-EEcCCeEEEee
Q psy17688 273 ACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA-ICYNKYLEVLR 348 (349)
Q Consensus 273 ~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~vw~ 348 (349)
..+.+++|+|++++ |++++ .++.|++||+++. +++..+..| ..+.+++|+|+++.+++ ++.|+.|++|+
T Consensus 200 ~~~~~~~~~~~g~~-l~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 200 AAPSGIAVNPEGTK-AYVTNVDKYFNTVSMIDTGTN-----KITARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp SEEEEEEECTTSSE-EEEEEECSSCCEEEEEETTTT-----EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCccceEECCCCCE-EEEEecCcCCCcEEEEECCCC-----eEEEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 68899999999998 66665 7899999999873 345666664 45789999999987754 46689999998
Q ss_pred C
Q psy17688 349 V 349 (349)
Q Consensus 349 v 349 (349)
+
T Consensus 273 ~ 273 (391)
T 1l0q_A 273 T 273 (391)
T ss_dssp T
T ss_pred C
Confidence 5
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=7.1e-29 Score=213.43 Aligned_cols=249 Identities=14% Similarity=0.056 Sum_probs=191.6
Q ss_pred ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
..+.+..+..+..+.+++|+| +|++.+++++. ++.|++|++. +++... .+.+...+.+++|+|+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~----d~~i~v~d~~--~~~~~~--~~~~~~~v~~~~~spdg~~--- 87 (391)
T 1l0q_A 21 SNKVTATIPVGSNPMGAVISP--DGTKVYVANAH----SNDVSIIDTA--TNNVIA--TVPAGSSPQGVAVSPDGKQ--- 87 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECT--TSSEEEEEEGG----GTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE---
T ss_pred CCeEEEEeecCCCcceEEECC--CCCEEEEECCC----CCeEEEEECC--CCeEEE--EEECCCCccceEECCCCCE---
Confidence 345566777778899999999 99863356656 8999999875 344433 3344559999999999983
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeeccc
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (349)
++++++ + .|++||+.+++.. ..+..+ ..+.+++|+| +++.+ ++++.++.|++||+.+++..
T Consensus 88 -l~~~~~~~~~v~v~d~~~~~~~--~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~------ 151 (391)
T 1l0q_A 88 -VYVTNMASSTLSVIDTTSNTVA--GTVKTG------KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVI------ 151 (391)
T ss_dssp -EEEEETTTTEEEEEETTTTEEE--EEEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE------
T ss_pred -EEEEECCCCEEEEEECCCCeEE--EEEeCC------CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEE------
Confidence 345554 4 9999999886532 222221 4678999998 77766 78888999999999988876
Q ss_pred CCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
..+..+ ..+.+++|+|++ +.+ ++++.++.|++||+++++....+. +...+.+++|+| ++.++++++
T Consensus 152 -----~~~~~~-~~~~~~~~~~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~-~g~~l~~~~ 218 (391)
T 1l0q_A 152 -----NTVSVG-RSPKGIAVTPDG---TKVYVANFDSMSISVIDTVTNSVIDTVK---VEAAPSGIAVNP-EGTKAYVTN 218 (391)
T ss_dssp -----EEEECC-SSEEEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEEE---CSSEEEEEEECT-TSSEEEEEE
T ss_pred -----EEEecC-CCcceEEECCCC---CEEEEEeCCCCEEEEEECCCCeEEEEEe---cCCCccceEECC-CCCEEEEEe
Confidence 344444 457999999998 555 788899999999999876544442 456889999999 888888887
Q ss_pred ---eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 248 ---MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 248 ---~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
.++ .|++||+++ ++.+..+..|. .+.+++|+|++++++++++.|+.|++||+.++
T Consensus 219 ~~~~~~-~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 219 VDKYFN-TVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp ECSSCC-EEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cCcCCC-cEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 577 699999987 77777777764 57899999999985678899999999999873
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.5e-30 Score=222.44 Aligned_cols=267 Identities=13% Similarity=0.129 Sum_probs=177.1
Q ss_pred ceeeeeecCCceeeEEEeec------------------CCCceEEEEEeeecccCCeEEEEecccccccc--ccceEecC
Q psy17688 14 KEIYKYEAPWPLYSMNWSVR------------------PDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDH 73 (349)
Q Consensus 14 ~~~~~~~~~~~v~~~~~sp~------------------~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~ 73 (349)
..+..+....++..+.|++. +++.+ ||+|+. |++|+||+.+...... ......+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-las~~~----d~~v~lw~~~~~~~~~~~~~~~~~gH 135 (393)
T 4gq1_A 61 QELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLF-LACVCQ----DNTVRLIITKNETIITQHVLGGKSGH 135 (393)
T ss_dssp EEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEE-EEEEET----TSCEEEEEEETTEEEEEEEECTTTSC
T ss_pred eeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCE-EEEEeC----CCcEEEEECCCCccceeeeecccCCC
Confidence 34445555556666665531 13454 899988 9999999886432111 11112379
Q ss_pred CCCeeEEEEec--------CCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688 74 PYPTTKIMWIP--------DRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG 143 (349)
Q Consensus 74 ~~~v~~~~~~~--------~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (349)
.+.|++++|+| +++ +||+++ | +|+|||+.+.... ..+..+. .++.+++|+|.+..+|+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~-----~las~s~D~tv~~Wd~~~~~~~--~~~~~~~-----~~v~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQ-----VIASVGDDCTLIIWRLTDEGPI--LAGYPLS-----SPGISVQFRPSNPNQLI 203 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEE-----EEEEEETTSEEEEEEEETTEEE--EEEEECS-----SCEEEEEEETTEEEEEE
T ss_pred CCceEEEEEccccccccCCCCC-----EEEEEECCCeEEEEECCCCcee--eeecCCC-----CCcEEEEECCCCCceEE
Confidence 99999999998 566 999998 5 9999999775422 2222333 68999999995556899
Q ss_pred EEEcCCeEEEEeccCcceeeeeccc--------------CCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEE
Q psy17688 144 TSSIDTTCTIWCLETNQVVGRVNSV--------------SGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVR 208 (349)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~ 208 (349)
+|+.||+|++||+++++........ .........+|...+.++.|+ |++ ..+++++.|+.++
T Consensus 204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg---~~l~s~s~d~~i~ 280 (393)
T 4gq1_A 204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG---SGILAMCKSGAWL 280 (393)
T ss_dssp EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT---CEEEEECTTSEEE
T ss_pred ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCC---CEEEEEeCCCCEE
Confidence 9999999999999987665332110 001112235688889999997 677 8999999999999
Q ss_pred EEECCCCCceeeeeeC----------------CCCCceeEEEEeCC-CCCeEEEEeeCCcEEEEEeccCCCcceeEeecC
Q psy17688 209 MFDLRHLEHSTIIYED----------------PQHTPLLRLAWNKQ-DPNYLAMVAMNACEVIILDVRVPCTPVARLNNH 271 (349)
Q Consensus 209 iwd~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~-~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~ 271 (349)
+||++.++....+... ..........|+|. ++.++++|+.|+ .|++||+.. +++...+..|
T Consensus 281 vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg-~V~lwd~~~-~~~~~~~~~~ 358 (393)
T 4gq1_A 281 RWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG-LIQLINTYE-KDSNSIPIQL 358 (393)
T ss_dssp EEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT-EEEEEETTC-TTCCEEEEEC
T ss_pred EEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC-EEEEEECCC-CcEEEEecCC
Confidence 9999875432222110 01112223344442 344667778899 699999997 7777788889
Q ss_pred CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
..+|++++|+|+|++ ||+++.+| +.+|.+..
T Consensus 359 ~~~V~svafspdG~~-LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 359 GMPIVDFCWHQDGSH-LAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SSCEEEEEECTTSSE-EEEEESSE-EEEEEEGG
T ss_pred CCcEEEEEEcCCCCE-EEEEeCCC-eEEEEEeC
Confidence 999999999999998 99998665 77777654
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=8.6e-29 Score=201.71 Aligned_cols=256 Identities=14% Similarity=0.115 Sum_probs=165.8
Q ss_pred cccceeeeeecCC-ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEEEecCCCC
Q psy17688 11 TTQKEIYKYEAPW-PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 11 ~~~~~~~~~~~~~-~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~ 88 (349)
...+.+++.+.+. +|..+.|.| |-...+.++-. +=..+.|+..-+.++...+... ..-+|...|..+ ++++
T Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~-~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~- 146 (356)
T 2w18_A 74 WQWEKLYTWHFAEVPVLQIVPVP--DVYNLVCVALG-NLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRR- 146 (356)
T ss_dssp SBEEEEEEEECCSSCEEEECCCT--TCCSCEEEEEC-SSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTE-
T ss_pred ccceeeEEEeccCceeEEEEEcC--cccceeeeeec-cccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCc-
Confidence 3446788888774 899999887 54432333322 1112233333333321111111 112344445544 5555
Q ss_pred CCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC--CCCCeEEEEEcCCeEEEEeccCccee
Q psy17688 89 VFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE--VDPNLLGTSSIDTTCTIWCLETNQVV 162 (349)
Q Consensus 89 ~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~ 162 (349)
++.+++ + .|++|++..... ....+..|. ..+..++|++ .++..|++|+.|++|+|||+.+++.+
T Consensus 147 ----lv~ss~~g~d~~V~~~~~s~dG~-~~~s~~~~~-----~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l 216 (356)
T 2w18_A 147 ----LVSSSGTLSDQQVEVMTFAEDGG-GKENQFLMP-----PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL 216 (356)
T ss_dssp ----EEEEESSSTTCEEEEEEECTTSC-EEEEEEECC-----CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ----EEEecccCCCCcEEEEEECCCCc-eeeeeccCC-----CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE
Confidence 777754 5 999999955332 122223333 4566667765 46789999999999999999999988
Q ss_pred eeecccCCceeeeeeccC---CceeeEEEecCCCCccEE------------EEEcCCCcEEEEECCCCCceeeee---eC
Q psy17688 163 GRVNSVSGHVKTQLIAHD---KEVYDIAFSRAGGGRDMF------------ASVGAEGSVRMFDLRHLEHSTIIY---ED 224 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l------------~~~~~d~~v~iwd~~~~~~~~~~~---~~ 224 (349)
.++.+|. ..+.+++|+|++ .++ ++|+.|++|++||..+++...... ..
T Consensus 217 -----------~tL~g~~~~v~~v~~vafSpdG---~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~ 282 (356)
T 2w18_A 217 -----------KKMHIDDSYQASVCHKAYSEMG---LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP 282 (356)
T ss_dssp -----------EEEECCC---CCCEEEEEEETT---EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred -----------EEEcCCCcceeeeEEEEECCCC---CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence 4565543 356777999998 665 668899999999999887554332 12
Q ss_pred CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceE-EEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688 225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVN-GIAWAPHSSCHICTAGDDHQALIWDIQ 303 (349)
Q Consensus 225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~~d~~v~iwd~~ 303 (349)
.+...+.+. +. ++.++++++.|+ +|+|||+.+ ++.+.++.+|...+. .++|+|+|++ |++|+.|++|+|||+.
T Consensus 283 Gh~~~~lsg--~~-sg~~lASgS~Dg-TIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 283 GQAGRFLEG--DV-KDHCAAAILTSG-TIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TCCCCEEEE--EE-ETTEEEEEETTS-CEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSE-EEEECTTSCEEEEEEC
T ss_pred CCcceeEcc--cc-CCCEEEEEcCCC-cEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCE-EEEEECCCcEEEecCC
Confidence 333333333 33 477899999999 699999998 899999999887655 6899999998 9999999999999963
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=3.1e-26 Score=203.94 Aligned_cols=305 Identities=8% Similarity=0.054 Sum_probs=218.0
Q ss_pred cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec----CC
Q psy17688 11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP----DR 86 (349)
Q Consensus 11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~ 86 (349)
...+.+..+..+..+..++|+| ||++ |++++. ++.|.+|+++..+++... .+.+...+..++|+| ++
T Consensus 167 ~t~~~~~~i~~g~~~~~v~~sp--dg~~-l~v~~~----d~~V~v~D~~~~t~~~~~--~i~~g~~p~~va~sp~~~~dg 237 (543)
T 1nir_A 167 DSKKIVKVIDTGYAVHISRMSA--SGRY-LLVIGR----DARIDMIDLWAKEPTKVA--EIKIGIEARSVESSKFKGYED 237 (543)
T ss_dssp TTCCEEEEEECSTTEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCEEEE--EEECCSEEEEEEECCSTTCTT
T ss_pred CCceEEEEEecCcccceEEECC--CCCE-EEEECC----CCeEEEEECcCCCCcEEE--EEecCCCcceEEeCCCcCCCC
Confidence 3344566666565689999999 9996 999987 899999998533444433 344666789999999 99
Q ss_pred CCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCC---CCC-cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc
Q psy17688 87 KGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKN---SDF-CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN 159 (349)
Q Consensus 87 ~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~---~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 159 (349)
+ ++++++ + +|.+||..+.+........+... .-| ...+.++.++|....++++...++.|.+||+.+.
T Consensus 238 ~-----~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 238 R-----YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp T-----EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred C-----EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 8 666665 4 99999998765322211111000 001 1368889999855667778888999999999886
Q ss_pred ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEe
Q psy17688 160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWN 236 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~ 236 (349)
+.+. .....+...+.++.|+|++ +++ +++..+++|.+||+.+++....+... .|......+ ++
T Consensus 313 ~~l~----------~~~i~~~~~~~~~~~spdg---~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 313 DNLT----------VTSIGAAPFLHDGGWDSSH---RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp SSCE----------EEEEECCSSCCCEEECTTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred Ccce----------eEEeccCcCccCceECCCC---CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 6542 1122355678899999999 655 45567899999999998765554322 133223333 47
Q ss_pred CCCCCeEEEEe-eCCcEEEEEeccCC------CcceeEeecCCcceEEEEEeeCCCCEEEEEc-------CCCcEEEEEe
Q psy17688 237 KQDPNYLAMVA-MNACEVIILDVRVP------CTPVARLNNHRACVNGIAWAPHSSCHICTAG-------DDHQALIWDI 302 (349)
Q Consensus 237 ~~~~~~l~~~~-~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-------~d~~v~iwd~ 302 (349)
|.++.+++++. .++ +|.+||+... .+.+.++..|.+.+..++++|++++ |++++ .+++|.+||+
T Consensus 379 p~~g~~~~s~~~~d~-~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 379 PKYGPVWSTSHLGDG-SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp TTTEEEEEEEBSSSS-EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEET
T ss_pred CCCccEEEeccCCCc-eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEEC
Confidence 74477777776 567 6999999752 5678889999888899999999999 88876 2679999999
Q ss_pred ecCCCCCCCcEEEE--------eccCCceEEEEEcCCCCceEEEEc-----CCeEEEeeC
Q psy17688 303 QQMPRAIEDPILAY--------TAAGGEINQIQWGATQPDWIAICY-----NKYLEVLRV 349 (349)
Q Consensus 303 ~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vw~v 349 (349)
.+.+.. ...+ ..+...+.++.|+|+|+.++++.. ++.|.||+.
T Consensus 457 ~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 457 KNLDAK----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp TCTTSC----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCCCCC----eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 986542 1222 244678999999999998887743 699999974
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=3.3e-27 Score=204.14 Aligned_cols=283 Identities=13% Similarity=0.109 Sum_probs=201.7
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCC----eEEEEeccccccccc-cceEecCCCCeeEEEEecC------------
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNN----KVQIVALNEDISEFG-PKSTIDHPYPTTKIMWIPD------------ 85 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g----~i~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~------------ 85 (349)
..+...+|++ .|...+++|+.....+| .++||++...+++.+ ......|...+..+++++.
T Consensus 63 ~~~~~~~w~~--~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 63 QEVQPAAWSA--LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp GGCCHHHHHT--TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cCcCHHHHHh--cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 4677888887 66644778875333467 899998821233333 2224467777887777651
Q ss_pred --CCCCCCcEEEEeC-------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---eEEE
Q psy17688 86 --RKGVFPDLLATSG-------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---TCTI 153 (349)
Q Consensus 86 --~~~~~~~~l~~~~-------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~i 153 (349)
+.. ++.++. ..|++||++... ...+..+. ..+.+++|+| +++.|++++.++ .|++
T Consensus 141 ~~~~~----l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~-----~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~ 207 (415)
T 2hqs_A 141 AFRTR----IAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSP-----QPLMSPAWSP-DGSKLAYVTFESGRSALVI 207 (415)
T ss_dssp CTTCE----EEEEEECSSSSCCEEEEEEETTSCS---CEEEEEES-----SCEEEEEECT-TSSEEEEEECTTSSCEEEE
T ss_pred cCCCE----EEEEEecCCCCccceEEEEcCCCCC---CEEEeCCC-----CcceeeEEcC-CCCEEEEEEecCCCcEEEE
Confidence 331 333332 279999997543 22333333 6899999998 999999999885 9999
Q ss_pred EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EEcCCCc--EEEEECCCCCceeeeeeCCCCCce
Q psy17688 154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SVGAEGS--VRMFDLRHLEHSTIIYEDPQHTPL 230 (349)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~v 230 (349)
||+.+++.. .+..|...+.+++|+|++ +.|+ +++.++. |++||+++++.... ..+...+
T Consensus 208 ~d~~tg~~~------------~l~~~~~~~~~~~~spdg---~~la~~~~~~g~~~i~~~d~~~~~~~~l---~~~~~~~ 269 (415)
T 2hqs_A 208 QTLANGAVR------------QVASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQIRQV---TDGRSNN 269 (415)
T ss_dssp EETTTCCEE------------EEECCSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCEEEC---CCCSSCE
T ss_pred EECCCCcEE------------EeecCCCcccCEEEcCCC---CEEEEEEecCCCceEEEEECCCCCEEeC---cCCCCcc
Confidence 999988764 456677889999999999 6666 6766655 99999998764222 2456789
Q ss_pred eEEEEeCCCCCeEEEEeeC-Cc-EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC---CcEEEEEeecC
Q psy17688 231 LRLAWNKQDPNYLAMVAMN-AC-EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD---HQALIWDIQQM 305 (349)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~d-~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---~~v~iwd~~~~ 305 (349)
.+++|+| +++.|++++.+ +. .|.+||+.. ++ ...+..+...+..++|+|+|++ |++++.+ ..|++||+.+.
T Consensus 270 ~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~-l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 270 TEPTWFP-DSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp EEEEECT-TSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEEETTTC
T ss_pred cceEECC-CCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCE-EEEEECcCCceEEEEEECCCC
Confidence 9999999 89988887764 31 377778775 33 4555667778999999999998 6666543 58999999873
Q ss_pred CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC---eEEEeeC
Q psy17688 306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK---YLEVLRV 349 (349)
Q Consensus 306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~vw~v 349 (349)
. ...+..+. .+.+++|+|+++.|++++.++ .|.+|++
T Consensus 346 ~------~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 346 G------VQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp C------EEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred C------EEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 2 23344443 889999999999888888775 7888874
No 129
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=1.2e-25 Score=190.08 Aligned_cols=284 Identities=8% Similarity=0.076 Sum_probs=195.6
Q ss_pred EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhh
Q psy17688 39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLE 114 (349)
Q Consensus 39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~ 114 (349)
++++|++....++.|.+|.++..++++.......+...+..++|+|+++ +++++. + .|.+|++.++.....
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-----l~~~~~~~~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-----LYSVDKEDDEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-----EEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-----EEEEEecCCCceEEEEEecCCcEEEe
Confidence 4788877555577899999998878776655556667889999999997 665553 3 999999976542222
Q ss_pred eeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeec---------cCCcee
Q psy17688 115 CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA---------HDKEVY 184 (349)
Q Consensus 115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~ 184 (349)
.....+ ...+..++|+| ++++|++++ .++.|.+|++........+ ..+.. +...+.
T Consensus 79 ~~~~~~-----~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~--------~~~~~~~~~p~~~~~~~~~~ 144 (347)
T 3hfq_A 79 NTVVAP-----GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLT--------DTVQHSGHGPRPEQDGSHIH 144 (347)
T ss_dssp EEEEEE-----SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEE--------EEEECCCCCSSTTCSSCCEE
T ss_pred eeeecC-----CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeec--------ceeecCCCCCCccccCCCce
Confidence 111111 24677899998 888888887 6799999999632222111 11111 223488
Q ss_pred eEEEecCCCCccEEEEEcCCCcEEEEECC-CCCceeee-eeCCCCCceeEEEEeCCCCCeEEEE-eeCCcEEEEEeccCC
Q psy17688 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLR-HLEHSTII-YEDPQHTPLLRLAWNKQDPNYLAMV-AMNACEVIILDVRVP 261 (349)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~~i~v~d~~~~ 261 (349)
+++|+|++ +++++...++.|++||+. +++..... ........+..++|+| ++++++++ ..++ .|.+|++...
T Consensus 145 ~~~~spdg---~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~-~v~v~~~~~~ 219 (347)
T 3hfq_A 145 YTDLTPDN---RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSS-QIASLKYDTQ 219 (347)
T ss_dssp EEEECTTS---CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTT-EEEEEEEETT
T ss_pred EEEECCCC---cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCC-EEEEEEecCC
Confidence 89999999 777777788999999998 33322211 1222334678899999 88866665 4556 6999998741
Q ss_pred -Cc--ceeEeecCC------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688 262 -CT--PVARLNNHR------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ 332 (349)
Q Consensus 262 -~~--~~~~~~~~~------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 332 (349)
++ .+..+.... ..+..++|+|+|++++++...++.|.+||+..... ...+..+..+...+.+++|+|++
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~--~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH--LTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC--EEEEEEEECSSSCCCEEEECTTS
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc--EEEeEEEecCCCCcCeEEECCCC
Confidence 22 122332222 45889999999998556777789999999974211 12344455556678999999999
Q ss_pred CceEEEEcC-CeEEEee
Q psy17688 333 PDWIAICYN-KYLEVLR 348 (349)
Q Consensus 333 ~~l~~~~~d-~~v~vw~ 348 (349)
++|++++.+ +.|.+|+
T Consensus 298 ~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 298 AFVVVVNQNTDNATLYA 314 (347)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CEEEEEEcCCCcEEEEE
Confidence 988888775 8999995
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.5e-25 Score=189.02 Aligned_cols=281 Identities=11% Similarity=0.093 Sum_probs=186.9
Q ss_pred CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--cEEEEECC--CCC
Q psy17688 36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--YLRVWRAG--EPE 110 (349)
Q Consensus 36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i~vw~~~--~~~ 110 (349)
+++.+++++. ++.|.+|+++. .++........+...+.+++|+|+++ +|++++ + .|.+|+++ ++.
T Consensus 4 ~~~l~~~~~~----~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdg~-----~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 4 KQTVYIASPE----SQQIHVWNLNH-EGALTLTQVVDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEEGG----GTEEEEEEECT-TSCEEEEEEEECSSCCCCEEECTTSS-----EEEEEETTTTEEEEEEECTTTCC
T ss_pred eEEEEEeCCC----CCeEEEEEECC-CCcEEEeeeEecCCCCceEEECCCCC-----EEEEeecCCCeEEEEEecCCCCc
Confidence 3442444455 89999999965 34444444566788899999999998 555544 3 99999997 333
Q ss_pred chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe
Q psy17688 111 TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS 189 (349)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 189 (349)
......+..+ ..+..++|+| +++.+++++. ++.|.+||+..+.... ....+.. ...+.+++|+
T Consensus 74 ~~~~~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~--------~~~~~~~-~~~~~~~~~s 137 (343)
T 1ri6_A 74 LTFAAESALP------GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVG--------VVDVVEG-LDGCHSANIS 137 (343)
T ss_dssp EEEEEEEECS------SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEE--------EEEEECC-CTTBCCCEEC
T ss_pred eeeccccccC------CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccc--------ccccccC-CCCceEEEEC
Confidence 2211112111 2567899998 8887766654 8899999995332211 1123333 3458999999
Q ss_pred cCCCCccEEEEEc-CCCcEEEEECCC-CCceee---eeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCC-C
Q psy17688 190 RAGGGRDMFASVG-AEGSVRMFDLRH-LEHSTI---IYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVP-C 262 (349)
Q Consensus 190 ~~~~~~~~l~~~~-~d~~v~iwd~~~-~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~-~ 262 (349)
|++ +.+++++ .++.|++||+.+ ++.... .........+..++|+| ++.++++++ .++ .|.+||+... +
T Consensus 138 ~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~-~i~~~~~~~~~g 212 (343)
T 1ri6_A 138 PDN---RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNS-SVDVWELKDPHG 212 (343)
T ss_dssp TTS---SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTT-EEEEEESSCTTS
T ss_pred CCC---CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCC-EEEEEEecCCCC
Confidence 998 6666665 899999999987 433221 12223445788999999 888666555 677 6999999631 2
Q ss_pred cc--eeEee---c-C--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688 263 TP--VARLN---N-H--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD 334 (349)
Q Consensus 263 ~~--~~~~~---~-~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 334 (349)
.. ..... . + ...+..++|+|+++++++++..++.|.+||+...... ...+..+..+. .+.+++|+|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-~~~~~~~~~~~-~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 213 NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV-LSKEGFQPTET-QPRGFNVDHSGKY 290 (343)
T ss_dssp CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-EEEEEEEECSS-SCCCEEECTTSSE
T ss_pred cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc-eEEeeeecCCC-ccceEEECCCCCE
Confidence 21 22222 1 1 2356789999999985567778999999999842110 12333444433 4899999999998
Q ss_pred eEEEE-cCCeEEEeeC
Q psy17688 335 WIAIC-YNKYLEVLRV 349 (349)
Q Consensus 335 l~~~~-~d~~v~vw~v 349 (349)
|++++ .++.|.+|++
T Consensus 291 l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 291 LIAAGQKSHHISVYEI 306 (343)
T ss_dssp EEEECTTTCEEEEEEE
T ss_pred EEEecCCCCeEEEEEE
Confidence 88888 4799999953
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=6.8e-24 Score=179.67 Aligned_cols=290 Identities=11% Similarity=0.066 Sum_probs=204.3
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeeec---ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE---EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~---~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
.+........++.++|+| +|++ |++++... ..++.|.+|+.. +++.... ......+..++|+|+++.
T Consensus 33 ~~~~~~~~~~~~~~~~s~--dg~~-l~~~~~~~~~~~~~~~v~~~d~~--~~~~~~~--~~~~~~~~~~~~s~dg~~--- 102 (353)
T 3vgz_A 33 EMLRKAVGKGAYEMAYSQ--QENA-LWLATSQSRKLDKGGVVYRLDPV--TLEVTQA--IHNDLKPFGATINNTTQT--- 102 (353)
T ss_dssp CEEEEEEESSEEEEEEET--TTTE-EEEEECCCTTTEESEEEEEECTT--TCCEEEE--EEESSCCCSEEEETTTTE---
T ss_pred hhhhhhhccCccceEECC--CCCE-EEEEcCCCcCCCCCccEEEEcCC--CCeEEEE--EecCCCcceEEECCCCCE---
Confidence 345555567889999999 9985 77776411 125789999765 4444333 233456889999999973
Q ss_pred cEEEEeC-C-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceeeee
Q psy17688 92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVGRV 165 (349)
Q Consensus 92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~ 165 (349)
+++++. + .|.+||..+++............ ......+.++.|+| +++.+++++ .++.|.+||+.+++..
T Consensus 103 -l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~--- 177 (353)
T 3vgz_A 103 -LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLK--- 177 (353)
T ss_dssp -EEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEE---
T ss_pred -EEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceE---
Confidence 444444 4 99999998875322211111110 01112367899998 777777665 4789999999988876
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeE
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYL 243 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l 243 (349)
..+..+...+.+++|+|++ +.+++++.++.|.+||+.+++........ .....+..++|+| +++++
T Consensus 178 --------~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l 245 (353)
T 3vgz_A 178 --------TAIQNTGKMSTGLALDSEG---KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRA 245 (353)
T ss_dssp --------EEECCCCTTCCCCEEETTT---TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEE
T ss_pred --------EEecCCCCccceEEECCCC---CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEE
Confidence 3444455568899999999 78999999999999999987655444321 1344578899999 88877
Q ss_pred EEEeeC-CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCc
Q psy17688 244 AMVAMN-ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGE 322 (349)
Q Consensus 244 ~~~~~d-~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 322 (349)
++++.+ + .|.+||..+ ++.+..+.... ...++|+|++++++++...++.|.+||+.+. +.+..+.. ...
T Consensus 246 ~~~~~~~~-~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~-~~~ 315 (353)
T 3vgz_A 246 FITDSKAA-EVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----KVVKTFDT-PTH 315 (353)
T ss_dssp EEEESSSS-EEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEEEEC-CSE
T ss_pred EEEeCCCC-EEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC-----eEEEEEec-CCC
Confidence 776655 6 799999987 66666666543 2679999999985666667999999999873 33445554 557
Q ss_pred eEEEEEcCCCCceEEEEcC
Q psy17688 323 INQIQWGATQPDWIAICYN 341 (349)
Q Consensus 323 v~~~~~~~~~~~l~~~~~d 341 (349)
+.+++|+|+++.++++..+
T Consensus 316 ~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEEcc
Confidence 8999999999977776665
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.3e-25 Score=206.03 Aligned_cols=284 Identities=9% Similarity=0.013 Sum_probs=201.3
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCC-----eEEEEeccccccccccceEe-cCC---------------------
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNN-----KVQIVALNEDISEFGPKSTI-DHP--------------------- 74 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g-----~i~i~~~~~~~~~~~~~~~~-~~~--------------------- 74 (349)
...+.+++||| ||++ ||+++.. ++ .|.+|+++. ++....... .+.
T Consensus 36 ~~~~~~~~~Sp--dG~~-la~~~~~---d~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 36 GPTLMKPKVAP--DGSR-VTFLRGK---DSDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp CCCCEEEEECT--TSSE-EEEEECC---SSCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------C
T ss_pred CCCCCCceEec--CCCE-EEEEecc---CCCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhcc
Confidence 35799999999 9996 8877641 34 788887753 333222111 111
Q ss_pred -CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688 75 -YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT 152 (349)
Q Consensus 75 -~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~ 152 (349)
..|.+++|+||++ .|+++++ .|.+||+.++.......+..+ ...+..++|+| +++.|+.++. +.|.
T Consensus 108 ~~~v~~~~~SpDg~-----~l~~~~~~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SP-DG~~la~~~~-~~i~ 175 (741)
T 2ecf_A 108 MTGIVDYQWSPDAQ-----RLLFPLGGELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSP-KGGFVSFIRG-RNLW 175 (741)
T ss_dssp CEESCCCEECTTSS-----EEEEEETTEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECT-TSSEEEEEET-TEEE
T ss_pred ccCcceeEECCCCC-----EEEEEeCCcEEEEECCCCCcceEEEcccC-----CcccccccCCC-CCCEEEEEeC-CcEE
Confidence 2388999999999 8888776 999999987620001122222 25789999998 9999998874 6999
Q ss_pred EEeccCcceeeeecccCCceeeeeeccCC----------------ceeeEEEecCCCCccEEEEEcCCC-----------
Q psy17688 153 IWCLETNQVVGRVNSVSGHVKTQLIAHDK----------------EVYDIAFSRAGGGRDMFASVGAEG----------- 205 (349)
Q Consensus 153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~~~l~~~~~d~----------- 205 (349)
+||+.+++... ....+.. .+..++|+|++ +.|++++.|+
T Consensus 176 ~~d~~~g~~~~-----------~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg---~~l~~~~~d~~~~~~~~~~~~ 241 (741)
T 2ecf_A 176 VIDLASGRQMQ-----------LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD---SAIAYARIDESPVPVQKRYEV 241 (741)
T ss_dssp EEETTTTEEEE-----------CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS---SCEEEEEEECTTSCEEEEEEE
T ss_pred EEecCCCCEEE-----------eccCCccceeccccceeeeeccccccceEECCCC---CEEEEEEEcCCCCceEecCCC
Confidence 99999876652 1112221 25789999999 7888887665
Q ss_pred ----------------------cEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-----CCcEEEEEe
Q psy17688 206 ----------------------SVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-----NACEVIILD 257 (349)
Q Consensus 206 ----------------------~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d~~~i~v~d 257 (349)
.|++||+.+ ++.........+...+..++| | +++.|++++. +. .|++||
T Consensus 242 ~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~-~i~~~d 318 (741)
T 2ecf_A 242 YADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKL-DLVEVT 318 (741)
T ss_dssp CSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEE-EEEEEE
T ss_pred CCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeE-EEEEEE
Confidence 789999988 765433322235677899999 9 8998887764 34 699999
Q ss_pred ccCCCcceeEeecCCc----ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE-EEcCCC
Q psy17688 258 VRVPCTPVARLNNHRA----CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI-QWGATQ 332 (349)
Q Consensus 258 ~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~ 332 (349)
+.+ ++....+..+.. .+..+.|+|+|++ +++++.||.++||.+... .. ...+..|...+..+ .|+|++
T Consensus 319 ~~~-g~~~~~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~g~~~l~~~~~~----~~-~~~l~~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 319 LAS-NQQRVLAHETSPTWVPLHNSLRFLDDGSI-LWSSERTGFQHLYRIDSK----GK-AAALTHGNWSVDELLAVDEKA 391 (741)
T ss_dssp TTT-CCEEEEEEEECSSCCCCCSCCEECTTSCE-EEEECTTSSCEEEEECSS----SC-EEESCCSSSCEEEEEEEETTT
T ss_pred CCC-CceEEEEEcCCCCcCCcCCceEECCCCeE-EEEecCCCccEEEEEcCC----CC-eeeeeecceEEEeEeEEeCCC
Confidence 987 665555554433 4568999999995 999999998888887642 12 45566667788887 599999
Q ss_pred CceEEEEcC-C--eEEEeeC
Q psy17688 333 PDWIAICYN-K--YLEVLRV 349 (349)
Q Consensus 333 ~~l~~~~~d-~--~v~vw~v 349 (349)
+.+++++.+ + .+++|++
T Consensus 392 ~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 392 GLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp TEEEEEECSSCTTCBEEEEE
T ss_pred CEEEEEEeCCCCceEEEEEE
Confidence 877766654 4 8889864
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.8e-24 Score=187.01 Aligned_cols=248 Identities=13% Similarity=0.100 Sum_probs=183.4
Q ss_pred CceEEEEEeeecccC---CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C----cEEEEECC
Q psy17688 36 KLFRLAIGSYVEEYN---NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D----YLRVWRAG 107 (349)
Q Consensus 36 ~~~~la~g~~~~~~~---g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~----~i~vw~~~ 107 (349)
+. ++++++... .+ +.|++|+++. +.. .....|...|.+++|+|+++ .|++++ + .|++||+.
T Consensus 143 ~~-~l~~~s~~~-~~~~~~~i~i~d~~g--~~~--~~l~~~~~~v~~~~~Spdg~-----~la~~s~~~~~~~i~~~d~~ 211 (415)
T 2hqs_A 143 RT-RIAYVVQTN-GGQFPYELRVSDYDG--YNQ--FVVHRSPQPLMSPAWSPDGS-----KLAYVTFESGRSALVIQTLA 211 (415)
T ss_dssp TC-EEEEEEECS-SSSCCEEEEEEETTS--CSC--EEEEEESSCEEEEEECTTSS-----EEEEEECTTSSCEEEEEETT
T ss_pred CC-EEEEEEecC-CCCccceEEEEcCCC--CCC--EEEeCCCCcceeeEEcCCCC-----EEEEEEecCCCcEEEEEECC
Confidence 45 477666521 12 7999998862 222 22446888999999999998 777665 2 89999998
Q ss_pred CCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCe--EEEEeccCcceeeeecccCCceeeeeeccCCcee
Q psy17688 108 EPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTT--CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVY 184 (349)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (349)
+++.. .+..+. ..+.+++|+| +++.|+ +++.++. |++||+.+++.. .+..|...+.
T Consensus 212 tg~~~---~l~~~~-----~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~------------~l~~~~~~~~ 270 (415)
T 2hqs_A 212 NGAVR---QVASFP-----RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIR------------QVTDGRSNNT 270 (415)
T ss_dssp TCCEE---EEECCS-----SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE------------ECCCCSSCEE
T ss_pred CCcEE---EeecCC-----CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEE------------eCcCCCCccc
Confidence 87532 233332 5789999998 888777 6666654 999999887653 4567888899
Q ss_pred eEEEecCCCCccEEEEEcC-CC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC---CcEEEEEec
Q psy17688 185 DIAFSRAGGGRDMFASVGA-EG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDV 258 (349)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~ 258 (349)
+++|+|++ +.|++++. ++ .|.+||+.+++..... .+...+.+++|+| ++++|++++.+ . .|.+||+
T Consensus 271 ~~~~spdg---~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~sp-dG~~l~~~~~~~g~~-~i~~~d~ 342 (415)
T 2hqs_A 271 EPTWFPDS---QNLAFTSDQAGRPQVYKVNINGGAPQRIT---WEGSQNQDADVSS-DGKFMVMVSSNGGQQ-HIAKQDL 342 (415)
T ss_dssp EEEECTTS---SEEEEEECTTSSCEEEEEETTSSCCEECC---CSSSEEEEEEECT-TSSEEEEEEECSSCE-EEEEEET
T ss_pred ceEECCCC---CEEEEEECCCCCcEEEEEECCCCCEEEEe---cCCCcccCeEECC-CCCEEEEEECcCCce-EEEEEEC
Confidence 99999999 77777775 45 6788898876543222 3456788999999 89999888875 4 6999999
Q ss_pred cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC---cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688 259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH---QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP 333 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 333 (349)
.+ ++. ..+..+. .+..++|+|+|+. |++++.++ .|++||+.. .....+..|.+.|.+++|+|...
T Consensus 343 ~~-~~~-~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 343 AT-GGV-QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDG------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp TT-CCE-EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTS------CCEEECCCSSSEEEEEEECCCCC
T ss_pred CC-CCE-EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCC------CcEEEeeCCCCCCcCCccccccc
Confidence 86 443 4555554 8999999999998 77766665 799999864 23566778889999999999653
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=2.7e-24 Score=191.47 Aligned_cols=289 Identities=12% Similarity=0.080 Sum_probs=202.8
Q ss_pred EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC
Q psy17688 29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA 106 (349)
Q Consensus 29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~ 106 (349)
+|+| ++.+ +++++. ++.|.+|+.. ++++......++ .+..++|+|+++ +|++++ + .|.+||+
T Consensus 144 ~~~p--~~~~-~vs~~~----d~~V~v~D~~--t~~~~~~i~~g~--~~~~v~~spdg~-----~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 144 DLDL--PNLF-SVTLRD----AGQIALVDGD--SKKIVKVIDTGY--AVHISRMSASGR-----YLLVIGRDARIDMIDL 207 (543)
T ss_dssp CCCG--GGEE-EEEEGG----GTEEEEEETT--TCCEEEEEECST--TEEEEEECTTSC-----EEEEEETTSEEEEEET
T ss_pred ccCC--CCEE-EEEEcC----CCeEEEEECC--CceEEEEEecCc--ccceEEECCCCC-----EEEEECCCCeEEEEEC
Confidence 3777 7874 777776 8999999765 455544332233 389999999998 666666 5 9999999
Q ss_pred --CCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 107 --GEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 107 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
.+.+. ...+.. ......++|+|. +++++++++ .+++|.+||..+.+.+..+...... ......|.
T Consensus 208 ~~~t~~~--~~~i~~------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~-~~~~~~~~ 278 (543)
T 1nir_A 208 WAKEPTK--VAEIKI------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT-VDTQTYHP 278 (543)
T ss_dssp TSSSCEE--EEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC-SSSCCEES
T ss_pred cCCCCcE--EEEEec------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc-cCcccccc
Confidence 55432 222221 245788999851 677888777 4899999999998887433210000 00000132
Q ss_pred C-ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEec
Q psy17688 181 K-EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDV 258 (349)
Q Consensus 181 ~-~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~ 258 (349)
. .+..+.++|++. .++++...++.|.+||+.+.+...... ......+..++|+| ++++|++++ .++ .|.+||.
T Consensus 279 ~~~v~~i~~s~~~~--~~~vs~~~~g~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~sp-dg~~l~va~~~~~-~v~v~D~ 353 (543)
T 1nir_A 279 EPRVAAIIASHEHP--EFIVNVKETGKVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDS-SHRYFMTAANNSN-KVAVIDS 353 (543)
T ss_dssp CCCEEEEEECSSSS--EEEEEETTTTEEEEEECTTSSSCEEEE-EECCSSCCCEEECT-TSCEEEEEEGGGT-EEEEEET
T ss_pred CCceEEEEECCCCC--EEEEEECCCCeEEEEEecCCCcceeEE-eccCcCccCceECC-CCCEEEEEecCCC-eEEEEEC
Confidence 3 688999999874 788888999999999998866443211 12456688999999 888776665 466 6999999
Q ss_pred cCCCcceeEeec----CCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCC--CCCCcEEEEeccCCceEEEEEcCC
Q psy17688 259 RVPCTPVARLNN----HRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPR--AIEDPILAYTAAGGEINQIQWGAT 331 (349)
Q Consensus 259 ~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~ 331 (349)
.+ ++.+..+.. |.+....+ ++|++..+++++. .|++|.+||+.+... ...+.+..+..|...+..++|+|+
T Consensus 354 ~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 354 KD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp TT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred CC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence 97 777777764 54433333 4787444477775 689999999987321 123567888888888999999999
Q ss_pred CCceEEEE-------cCCeEEEeeC
Q psy17688 332 QPDWIAIC-------YNKYLEVLRV 349 (349)
Q Consensus 332 ~~~l~~~~-------~d~~v~vw~v 349 (349)
+++|.+++ .+++|.||++
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCcEEEecCCCCCcccCceEEEEEC
Confidence 99888876 2679999985
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=6.1e-25 Score=181.16 Aligned_cols=255 Identities=13% Similarity=0.130 Sum_probs=184.0
Q ss_pred cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCC-CCchhheeccCCCCCCCc
Q psy17688 49 YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGE-PETRLECILNNNKNSDFC 126 (349)
Q Consensus 49 ~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~-~~~~~~~~~~~~~~~~~~ 126 (349)
.++.|++|++.. ++.. ....|...|.+++|+|+++ +|+++++ .|.+||+.+ ++. ......+ ..
T Consensus 20 ~~~~i~~~d~~~--~~~~--~~~~~~~~v~~~~~spdg~-----~l~~~~~~~i~~~d~~~~~~~--~~~~~~~----~~ 84 (297)
T 2ojh_A 20 MRSSIEIFNIRT--RKMR--VVWQTPELFEAPNWSPDGK-----YLLLNSEGLLYRLSLAGDPSP--EKVDTGF----AT 84 (297)
T ss_dssp CCEEEEEEETTT--TEEE--EEEEESSCCEEEEECTTSS-----EEEEEETTEEEEEESSSCCSC--EECCCTT----CC
T ss_pred cceeEEEEeCCC--Ccee--eeccCCcceEeeEECCCCC-----EEEEEcCCeEEEEeCCCCCCc--eEecccc----cc
Confidence 388999998753 3333 2446788999999999998 8888777 999999987 542 2222222 12
Q ss_pred CceeEEEecCCCCCeEEEEE--cCCeEEEEec--cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EE
Q psy17688 127 APLTSFDWNEVDPNLLGTSS--IDTTCTIWCL--ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SV 201 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~ 201 (349)
..+.+++|+| +++.|++++ .++...+|.+ .+++. ..+..+ ..+..++|+|++ +.++ ++
T Consensus 85 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~-~~~~~~~~spdg---~~l~~~~ 147 (297)
T 2ojh_A 85 ICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGTP------------RLMTKN-LPSYWHGWSPDG---KSFTYCG 147 (297)
T ss_dssp CBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCCC------------EECCSS-SSEEEEEECTTS---SEEEEEE
T ss_pred ccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCce------------EEeecC-CCccceEECCCC---CEEEEEE
Confidence 5678899998 899999998 3345555554 44432 223333 348899999999 5555 78
Q ss_pred cCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688 202 GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPCTPVARLNNHRACVNGIAW 280 (349)
Q Consensus 202 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 280 (349)
+.++.+++|+++...... .....+...+.+++|+| ++..|++++ .++ .+++|++......+..+..|...+..+.|
T Consensus 148 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2ojh_A 148 IRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSP-DGRWIYFNSSRTG-QMQIWRVRVDGSSVERITDSAYGDWFPHP 224 (297)
T ss_dssp EETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECT-TSSEEEEEECTTS-SCEEEEEETTSSCEEECCCCSEEEEEEEE
T ss_pred CCCCceEEEEEECCCCcc-eEcccCCCccccceECC-CCCEEEEEecCCC-CccEEEECCCCCCcEEEecCCcccCCeEE
Confidence 889999999965322111 12224567899999999 888777666 477 59999987446677778888889999999
Q ss_pred eeCCCCEEEEEcCC-----------CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688 281 APHSSCHICTAGDD-----------HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK 342 (349)
Q Consensus 281 ~p~~~~~l~~~~~d-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 342 (349)
+|++++ |++++.+ +.|++||+...+. ..+..+..|...+..++|+|+++.|++++.+.
T Consensus 225 s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 225 SPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV---ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC---EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc---eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999998 6666654 5699999987432 23444557788999999999999888887763
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=4.9e-24 Score=179.01 Aligned_cols=279 Identities=11% Similarity=0.078 Sum_probs=185.9
Q ss_pred EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC
Q psy17688 29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA 106 (349)
Q Consensus 29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~ 106 (349)
.|.+ ++.+.+++++. ++.|.+|+.. +++...... .+...+ .++|+|+++. +++++. + .|.+||+
T Consensus 4 ~~~~--~~~~~~v~~~~----~~~v~~~d~~--~~~~~~~~~-~~~~~~-~~~~s~dg~~----l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 4 MFQT--TSNFGIVVEQH----LRRISFFSTD--TLEILNQIT-LGYDFV-DTAITSDCSN----VVVTSDFCQTLVQIET 69 (331)
T ss_dssp ---C--CCCEEEEEEGG----GTEEEEEETT--TCCEEEEEE-CCCCEE-EEEECSSSCE----EEEEESTTCEEEEEEC
T ss_pred eEcC--CCCEEEEEecC----CCeEEEEeCc--ccceeeeEE-ccCCcc-eEEEcCCCCE----EEEEeCCCCeEEEEEC
Confidence 3554 55644666665 8999999875 445444333 334456 9999999983 444444 4 9999999
Q ss_pred CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---eEEEEeccCcceeeeecccCCceeeeeeccCCce
Q psy17688 107 GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV 183 (349)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v 183 (349)
.+++.. ......+. .+..+++|+| ++++++++..++ .|.+||+.+++.. ..+.. ....
T Consensus 70 ~~~~~~-~~~~~~~~-----~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~-----------~~~~~-~~~~ 130 (331)
T 3u4y_A 70 QLEPPK-VVAIQEGQ-----SSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFI-----------STIPI-PYDA 130 (331)
T ss_dssp SSSSCE-EEEEEECS-----SCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEE-----------EEEEC-CTTE
T ss_pred CCCcee-EEecccCC-----CCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeE-----------EEEEC-CCCc
Confidence 887531 12222222 3444489998 888888655553 8999999988876 33333 3456
Q ss_pred eeEEEecCCCCccEEEEEcCCCc-EEEEECCCCCceee--eeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEecc
Q psy17688 184 YDIAFSRAGGGRDMFASVGAEGS-VRMFDLRHLEHSTI--IYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVR 259 (349)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~ 259 (349)
.+++|+|+++ .++++...++. |.+|++........ .........+..++|+| +++++++++ .++ .|.+||+.
T Consensus 131 ~~~~~spdg~--~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~-~v~v~d~~ 206 (331)
T 3u4y_A 131 VGIAISPNGN--GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGN-SIGILETQ 206 (331)
T ss_dssp EEEEECTTSS--CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTT-EEEEEECS
T ss_pred cceEECCCCC--EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCC-eEEEEECC
Confidence 8999999983 35555566688 99999986433211 11113345689999999 888665555 566 69999998
Q ss_pred CCCcc---eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc----CC---ceEEEEEc
Q psy17688 260 VPCTP---VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA----GG---EINQIQWG 329 (349)
Q Consensus 260 ~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~----~~---~v~~~~~~ 329 (349)
. ++. +..+.. ...+..++|+|+|++++++...++.|.+||+.+.+.. .+..+..+ .. ....++|+
T Consensus 207 ~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s 281 (331)
T 3u4y_A 207 N-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS---FVKSFGHGLLIDPRPLFGANQMALN 281 (331)
T ss_dssp S-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE---EEEEEECCCCCCCGGGTTCCCEEEC
T ss_pred C-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee---eecccccccccCCCCcccccceEEC
Confidence 6 665 666654 4667899999999984555566888999999874320 12222221 11 23568999
Q ss_pred CCCCceEEEEc-CCeEEEeeC
Q psy17688 330 ATQPDWIAICY-NKYLEVLRV 349 (349)
Q Consensus 330 ~~~~~l~~~~~-d~~v~vw~v 349 (349)
|++++|++++. ++.|.+|++
T Consensus 282 pdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 282 KTETKLFISANISRELKVFTI 302 (331)
T ss_dssp TTSSEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEecCCCCcEEEEEe
Confidence 99998877776 479999985
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.9e-24 Score=198.56 Aligned_cols=286 Identities=11% Similarity=0.102 Sum_probs=199.6
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL 101 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i 101 (349)
.+|.+++||| | ++ ++++ . ++.|.+|++.. ++.. ....+...+.+++|+||++ .|+.+.+ .|
T Consensus 82 ~~v~~~~~sp--d-~~-~~~~-~----~~~i~~~d~~~--~~~~--~l~~~~~~~~~~~~SpdG~-----~la~~~~~~i 143 (706)
T 2z3z_A 82 FPSFRTLDAG--R-GL-VVLF-T----QGGLVGFDMLA--RKVT--YLFDTNEETASLDFSPVGD-----RVAYVRNHNL 143 (706)
T ss_dssp CCCEEEEETT--T-TE-EEEE-E----TTEEEEEETTT--TEEE--EEECCTTCCTTCEECTTSS-----EEEEEETTEE
T ss_pred cCceeEEECC--C-Ce-EEEE-E----CCEEEEEECCC--CceE--EccCCcccccCCcCCCCCC-----EEEEEECCeE
Confidence 5799999999 8 53 5554 3 79999998853 3332 2345667899999999998 7777776 99
Q ss_pred EEEECCC-----CCchhheeccCCCCC---------CCcCceeEEEecCCCCCeEEEEE---------------------
Q psy17688 102 RVWRAGE-----PETRLECILNNNKNS---------DFCAPLTSFDWNEVDPNLLGTSS--------------------- 146 (349)
Q Consensus 102 ~vw~~~~-----~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~--------------------- 146 (349)
.+|++.+ ++.. .....+... .+...+.++.|+| +++.|++++
T Consensus 144 ~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp EEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred EEEecCcccccCCCcE--EeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999987 5421 111111110 0112257899998 999999987
Q ss_pred ------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----cEEE
Q psy17688 147 ------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----SVRM 209 (349)
Q Consensus 147 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----~v~i 209 (349)
.+..|.+||+.+++.... .....|...+..++|+|++ +.|++++.++ .|++
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~---------~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~v~~ 288 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYL---------QTGEPKEKFLTNLSWSPDE---NILYVAEVNRAQNECKVNA 288 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEEC---------CCCSCTTCEEEEEEECTTS---SEEEEEEECTTSCEEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEee---------ccCCCCceeEeeEEEECCC---CEEEEEEeCCCCCeeEEEE
Confidence 346799999988775411 1112466779999999999 7888877665 8999
Q ss_pred EECCCCCceeeeeeCCCC---CceeEEEEeC-CCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEE-EEEeeCC
Q psy17688 210 FDLRHLEHSTIIYEDPQH---TPLLRLAWNK-QDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHS 284 (349)
Q Consensus 210 wd~~~~~~~~~~~~~~~~---~~v~~~~~~~-~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~ 284 (349)
||+.+++....+...... ..+..++|+| .++++++++..++ .+++|++...+..+..+..+...+.. +.|+|++
T Consensus 289 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 289 YDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp EETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS-SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS
T ss_pred EECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC-ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC
Confidence 999987433333222222 2346789998 2456888888888 59999887446677778778777877 7999999
Q ss_pred CCEEEEEcCCC----cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC----CeEEEeeC
Q psy17688 285 SCHICTAGDDH----QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN----KYLEVLRV 349 (349)
Q Consensus 285 ~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~v 349 (349)
+.++++++.++ .|+.||+.+.. ...+. |...+.+++|+|++++++.++.+ +.+.+|++
T Consensus 368 ~~l~~~~~~~~~~~~~l~~~d~~~~~------~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 368 TRLYFESTEASPLERHFYCIDIKGGK------TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp SEEEEEESSSCTTCBEEEEEETTCCC------CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred CEEEEEecCCCCceEEEEEEEcCCCC------ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 98556666665 45555554421 12222 46779999999999988776554 56999874
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=2.8e-23 Score=175.03 Aligned_cols=284 Identities=12% Similarity=0.075 Sum_probs=185.2
Q ss_pred ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688 14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL 93 (349)
Q Consensus 14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 93 (349)
+.+..+.....+.+++|+| +|++ |++++. .++.|.+|+++..+++............+..++|+|+++ .
T Consensus 29 ~~~~~~~~~~~~~~~~~sp--dg~~-l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~ 97 (343)
T 1ri6_A 29 TLTQVVDVPGQVQPMVVSP--DKRY-LYVGVR---PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ-----F 97 (343)
T ss_dssp EEEEEEECSSCCCCEEECT--TSSE-EEEEET---TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS-----E
T ss_pred EEeeeEecCCCCceEEECC--CCCE-EEEeec---CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCC-----E
Confidence 3444556667899999999 9996 777765 138999999985555544443444445899999999998 5
Q ss_pred EE-EeC-C-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccC-cceeeeecc
Q psy17688 94 LA-TSG-D-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLET-NQVVGRVNS 167 (349)
Q Consensus 94 l~-~~~-~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~ 167 (349)
++ ++. + .|.+|++..+.. ........ ...+.+++|+| +++.+++++ .++.|.+||+.+ ++....
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~--- 167 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEG------LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQ--- 167 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECC------CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEE---
T ss_pred EEEEecCCCeEEEEECCCCccccccccccC------CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeee---
Confidence 54 444 4 899999952211 11111111 13577899998 888777777 899999999987 543210
Q ss_pred cCCceee--eeec-cCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCC--CCc--eeeeeeCC----CCCceeEEEE
Q psy17688 168 VSGHVKT--QLIA-HDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRH--LEH--STIIYEDP----QHTPLLRLAW 235 (349)
Q Consensus 168 ~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~--~~~--~~~~~~~~----~~~~v~~~~~ 235 (349)
. .... ....+..++|+|++ +++ +++..++.|.+||+.. ++. ........ ....+..++|
T Consensus 168 ------~~~~~~~~~~~~~~~~~~~pdg---~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 168 ------DPAEVTTVEGAGPRHMVFHPNE---QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp ------EEEEEECSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred ------cccccccCCCCCcceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 1 1222 23468889999998 555 5556899999999964 322 11121111 1235678999
Q ss_pred eCCCCCeEEEEe-eCCcEEEEEeccCC---CcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCCCC
Q psy17688 236 NKQDPNYLAMVA-MNACEVIILDVRVP---CTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRAIE 310 (349)
Q Consensus 236 ~~~~~~~l~~~~-~d~~~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~~~ 310 (349)
+| ++++|+++. .++ .|.+||+... .+.+..+..+.. +..++|+|++++ |++++ .++.|.+|++...... .
T Consensus 239 s~-dg~~l~v~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~-l~~~~~~~~~v~v~~~d~~~g~-~ 313 (343)
T 1ri6_A 239 TP-DGRHLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKY-LIAAGQKSHHISVYEIVGEQGL-L 313 (343)
T ss_dssp CT-TSSEEEEEETTTT-EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSE-EEEECTTTCEEEEEEEETTTTE-E
T ss_pred CC-CCCEEEEEecCCC-EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCE-EEEecCCCCeEEEEEEcCCCce-e
Confidence 99 787776554 677 6999999731 234444554444 889999999998 55554 7899999977642211 1
Q ss_pred CcEEEEeccCCceEEEEEcCCCC
Q psy17688 311 DPILAYTAAGGEINQIQWGATQP 333 (349)
Q Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~ 333 (349)
..+..+.. .....+++|.|+.+
T Consensus 314 ~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 314 HEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEEEC-SSSCCEEEEEEEC-
T ss_pred eEcccccc-CCCCeeEEEEcccC
Confidence 12333433 35567788887543
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=5.7e-25 Score=203.89 Aligned_cols=286 Identities=9% Similarity=0.052 Sum_probs=188.9
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecCCCCCCCcEEEEe
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPDRKGVFPDLLATS 97 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~l~~~ 97 (349)
....+.+++|+| ||++ +++ +. +|.|++|++.. ++.... ...|.. .|.+++|+||++ .|+++
T Consensus 15 ~~~~~~~~~~sp--dg~~-~~~-~~----dg~i~~~d~~~--g~~~~~-~~~~~~~~~~v~~~~~SpDg~-----~l~~~ 78 (723)
T 1xfd_A 15 FKIHDPEAKWIS--DTEF-IYR-EQ----KGTVRLWNVET--NTSTVL-IEGKKIESLRAIRYEISPDRE-----YALFS 78 (723)
T ss_dssp TCCCCCCCCBSS--SSCB-CCC-CS----SSCEEEBCGGG--CCCEEE-ECTTTTTTTTCSEEEECTTSS-----EEEEE
T ss_pred CcccccccEEcC--CCcE-EEE-eC----CCCEEEEECCC--CcEEEE-eccccccccccceEEECCCCC-----EEEEE
Confidence 334578999999 9995 655 55 88999998763 333222 223333 499999999998 67765
Q ss_pred C-----------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 98 G-----------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 98 ~-----------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
+ ..+.+||+.+++. ..+... ..+...+..++|+| +++.|+.++. +.|++||+.+++...
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~--~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~--- 148 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDP---QSLDPP--EVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIR--- 148 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCC---EECCCT--TCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEE---
T ss_pred ecCccceeecceeeEEEEECCCCce---EeccCC--ccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEE---
Confidence 4 1577999988753 112111 12224578899998 9999999886 799999999877652
Q ss_pred ccCCceeeeeeccCC------------------ceeeEEEecCCCCccEEEEEcCCC-----------------------
Q psy17688 167 SVSGHVKTQLIAHDK------------------EVYDIAFSRAGGGRDMFASVGAEG----------------------- 205 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~~l~~~~~d~----------------------- 205 (349)
....+.. .+.+++|+|++ +.|++++.|+
T Consensus 149 --------~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg---~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (723)
T 1xfd_A 149 --------VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG---TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (723)
T ss_dssp --------EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS---SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred --------EecCCCCCceECcccceeEEEEeccCcceEEECCCC---CEEEEEEECCCccceEEeeccCCcCCCcceecc
Confidence 2222222 23789999999 7888877543
Q ss_pred -----------cEEEEECCCCCceeeeeeC----CCCCceeEEEEeCCCCCeEEEEeeC----CcEEEEEeccCCCccee
Q psy17688 206 -----------SVRMFDLRHLEHSTIIYED----PQHTPLLRLAWNKQDPNYLAMVAMN----ACEVIILDVRVPCTPVA 266 (349)
Q Consensus 206 -----------~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d----~~~i~v~d~~~~~~~~~ 266 (349)
.|++||+.+++....+... .+...+..++|+| +++++++.... . .|.+||+.+ ++...
T Consensus 218 ~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~-~i~~~d~~~-g~~~~ 294 (723)
T 1xfd_A 218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVS-ILTLCDATT-GVCTK 294 (723)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEE-EEEEEETTT-CCEEE
T ss_pred CCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeE-EEEEEeCCC-CcceE
Confidence 7999999887643332211 0245789999999 88888776543 3 699999986 55554
Q ss_pred Eeec-CCcceE----EEEEeeCCCCEEEE-EcCCC------cEEEEE-eecCCCCCCCcEEEEeccCCceEE-EEEcCCC
Q psy17688 267 RLNN-HRACVN----GIAWAPHSSCHICT-AGDDH------QALIWD-IQQMPRAIEDPILAYTAAGGEINQ-IQWGATQ 332 (349)
Q Consensus 267 ~~~~-~~~~v~----~~~~~p~~~~~l~~-~~~d~------~v~iwd-~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~ 332 (349)
.+.. +...+. .+.|+|+|+.+++. +..++ .|++|| ....... +...+..+...+.. ++|+|++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---~~~~l~~~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND---NIQSITSGDWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC---CCCBSCCSSSCEEEEEEEETTT
T ss_pred EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc---ceeEeecCCeEEEeeeEEcCCC
Confidence 4433 344443 78999999984443 55677 466666 2332200 01122222334444 6999999
Q ss_pred CceEEEEcC---CeEEEeeC
Q psy17688 333 PDWIAICYN---KYLEVLRV 349 (349)
Q Consensus 333 ~~l~~~~~d---~~v~vw~v 349 (349)
+.|+..+.+ +.+++|++
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEE
T ss_pred CEEEEEEcCCCCcceEEEEE
Confidence 988777665 78888874
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=7.4e-24 Score=196.95 Aligned_cols=285 Identities=12% Similarity=0.075 Sum_probs=201.2
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL 101 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i 101 (349)
.+.+++||| ||++ |++++ ++.|.+|+++.... +.. ....+...+..++|+||++ .|+.+++ .|
T Consensus 110 ~v~~~~~Sp--Dg~~-l~~~~-----~~~i~~~d~~~~~~~~~~--~l~~~~~~~~~~~~SPDG~-----~la~~~~~~i 174 (741)
T 2ecf_A 110 GIVDYQWSP--DAQR-LLFPL-----GGELYLYDLKQEGKAAVR--QLTHGEGFATDAKLSPKGG-----FVSFIRGRNL 174 (741)
T ss_dssp ESCCCEECT--TSSE-EEEEE-----TTEEEEEESSSCSTTSCC--BCCCSSSCEEEEEECTTSS-----EEEEEETTEE
T ss_pred CcceeEECC--CCCE-EEEEe-----CCcEEEEECCCCCcceEE--EcccCCcccccccCCCCCC-----EEEEEeCCcE
Confidence 378999999 9996 88765 48899998864310 222 2335677899999999999 8888886 99
Q ss_pred EEEECCCCCchhheeccCCCCCC-----------CcCceeEEEecCCCCCeEEEEEcCC---------------------
Q psy17688 102 RVWRAGEPETRLECILNNNKNSD-----------FCAPLTSFDWNEVDPNLLGTSSIDT--------------------- 149 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~l~~~~~dg--------------------- 149 (349)
.+|++.+++.. .+...+.... ....+.++.|+| +++.|++++.|+
T Consensus 175 ~~~d~~~g~~~--~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 175 WVIDLASGRQM--QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp EEEETTTTEEE--ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred EEEecCCCCEE--EeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 99999875421 1111111000 001247799998 999999988766
Q ss_pred ------------eEEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----CCcEEEEE
Q psy17688 150 ------------TCTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----EGSVRMFD 211 (349)
Q Consensus 150 ------------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----d~~v~iwd 211 (349)
.|.+||+.+ ++.... .....|...+..++| |++ +.|++++. +..|++||
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~-pDg---~~l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWI---------DLGKEQDIYLARVNW-RDP---QHLSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEE---------CCCSCSSEEEEEEEE-EET---TEEEEEEEETTSSEEEEEEEE
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEe---------cCCCCcceEEEEEEe-CCC---CEEEEEEecccCCeEEEEEEE
Confidence 788999987 665410 000146778999999 999 67776543 56899999
Q ss_pred CCCCCceeeeeeCCCCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE-EEeeCCCCE
Q psy17688 212 LRHLEHSTIIYEDPQHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI-AWAPHSSCH 287 (349)
Q Consensus 212 ~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~ 287 (349)
+.+++........ ... .+..++|+| +++++++++.++ .++||.+...+. ...+..|...+..+ .|+|+++.+
T Consensus 319 ~~~g~~~~~~~~~-~~~~~~~~~~~~~sp-dg~~~~~~~~~g-~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 319 LASNQQRVLAHET-SPTWVPLHNSLRFLD-DGSILWSSERTG-FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp TTTCCEEEEEEEE-CSSCCCCCSCCEECT-TSCEEEEECTTS-SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred CCCCceEEEEEcC-CCCcCCcCCceEECC-CCeEEEEecCCC-ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 9988765544322 222 456899999 888999998888 488887764355 77788888888887 599999985
Q ss_pred EEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC----CeEEEee
Q psy17688 288 ICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN----KYLEVLR 348 (349)
Q Consensus 288 l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~ 348 (349)
+++++.++ .+++|++..... ....+.. ...+..++|+|+++.++....+ ..+.+|+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g~----~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQGG----QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTCC----CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEeCCCCceEEEEEEEcCCC----Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 66777666 899999975221 2334444 6678899999999988776553 3566654
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=1.5e-22 Score=172.12 Aligned_cols=291 Identities=9% Similarity=0.106 Sum_probs=188.1
Q ss_pred eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-----cEEEEECCCCCc
Q psy17688 38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-----YLRVWRAGEPET 111 (349)
Q Consensus 38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-----~i~vw~~~~~~~ 111 (349)
+++.+|++....++.|.+|.++..++++...... +...+..++|+|+++ +|++++ + .|.+|+++....
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~-----~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGK-----FVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSS-----EEEEEECCSSTTCEEEEEEEETTTT
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCC-----EEEEEEccCCCCCcEEEEEEeCCCC
Confidence 3588998866667899999999888877666555 677889999999998 555543 1 899999876421
Q ss_pred hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecc---cCCceeeeeeccCCceeeEE
Q psy17688 112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNS---VSGHVKTQLIAHDKEVYDIA 187 (349)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~ 187 (349)
....+..... .......+++ ++++|++++ .++.|.+|++.....+..... ..+.-......+...+.+++
T Consensus 88 ~~~~~~~~~~---~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 88 TLHLLNTQKT---MGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp EEEEEEEEEC---SSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred cEEEeeEecc---CCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 1222111111 1134556666 566666665 678999999976544321100 00000000011223457899
Q ss_pred EecCCCCccEE-EEEcCCCcEEEEECCCCCc------ee-----eeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEE
Q psy17688 188 FSRAGGGRDMF-ASVGAEGSVRMFDLRHLEH------ST-----IIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVI 254 (349)
Q Consensus 188 ~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~------~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~ 254 (349)
|+|++ +++ ++...++.|++|++..... .. ..........+..++|+| +++++++++ .++ .|.
T Consensus 162 ~spdg---~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~-~v~ 236 (361)
T 3scy_A 162 ITPDG---KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGG-TVI 236 (361)
T ss_dssp ECTTS---SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTC-EEE
T ss_pred ECCCC---CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCC-eEE
Confidence 99999 544 5555689999999886442 11 122233456678999999 888888777 466 699
Q ss_pred EEeccCCCcc--eeEee---cCCcceEEEEEeeCCCCEEEEEcC-CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688 255 ILDVRVPCTP--VARLN---NHRACVNGIAWAPHSSCHICTAGD-DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW 328 (349)
Q Consensus 255 v~d~~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (349)
+||+.. +.. +..+. .+......++|+|+|++++++... ++.|.+|++...... ...+..+.. ...+.+++|
T Consensus 237 v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 237 AFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC-SSCCCEEEE
T ss_pred EEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC-CCCCceEEE
Confidence 999985 432 22222 233456899999999983444545 589999999732110 112333444 557889999
Q ss_pred cCCCCceEEEE-cCCeEEEee
Q psy17688 329 GATQPDWIAIC-YNKYLEVLR 348 (349)
Q Consensus 329 ~~~~~~l~~~~-~d~~v~vw~ 348 (349)
+|++++|++++ .++.|.+|+
T Consensus 314 spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEE
Confidence 99999888888 469999975
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.9e-23 Score=175.69 Aligned_cols=266 Identities=11% Similarity=-0.008 Sum_probs=183.5
Q ss_pred EEEEeeecccCCeEEEEeccccccccccceEecCCC-CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhee
Q psy17688 40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY-PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECI 116 (349)
Q Consensus 40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~ 116 (349)
|++++. ++.|.+|+.. +++.......++.. .+..++|+|+++. +++++. + .|.+||+.+++....
T Consensus 4 ~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~v~~~~~~~v~~~d~~~~~~~~~-- 71 (337)
T 1pby_B 4 ILAPAR----PDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRI----AYATVNKSESLVKIDLVTGETLGR-- 71 (337)
T ss_dssp EEEEET----TTEEEEEETT--TTEEEEEEECTTCTTCCCCEEECTTSSE----EEEEETTTTEEEEEETTTCCEEEE--
T ss_pred EEEcCC----CCeEEEEECC--CCcEEEEEEcCCCCCCccceEEcCCCCE----EEEEeCCCCeEEEEECCCCCeEee--
Confidence 778877 9999999875 34444332223222 5889999999973 455555 4 999999987653221
Q ss_pred ccCCCCCCCcCceeEEEecCCCCCeEEEEE------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCcee
Q psy17688 117 LNNNKNSDFCAPLTSFDWNEVDPNLLGTSS------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVY 184 (349)
Q Consensus 117 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (349)
+.......+...+.+++|+| +++.+++++ .++.|.+||+.+++.. ..+.. ...+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-----------~~~~~-~~~~~ 138 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-----------KAFEA-PRQIT 138 (337)
T ss_dssp EECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE-----------EEEEC-CSSCC
T ss_pred EEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEE-----------EEEeC-CCCcc
Confidence 21111000112566789998 888888886 5799999999887766 23332 34688
Q ss_pred eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-------------
Q psy17688 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC------------- 251 (349)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~------------- 251 (349)
+++|+|++ ++++++ ++.|++||+.+++....+....... .+.|+| ++..++..+..+.
T Consensus 139 ~~~~s~dg---~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~ 209 (337)
T 1pby_B 139 MLAWARDG---SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQP-DVLAVWNQHESSGVMATPFYTARKDI 209 (337)
T ss_dssp CEEECTTS---SCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTS
T ss_pred eeEECCCC---CEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCC-CccEEeeeccCCCceeeeeecccccc
Confidence 89999999 677777 6899999999876544433221112 337888 6665554443322
Q ss_pred ----------EEEEEeccCCCcc-eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688 252 ----------EVIILDVRVPCTP-VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG 320 (349)
Q Consensus 252 ----------~i~v~d~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 320 (349)
.|.+||+.+ ++. ...+..+...+..++|+|++++ |+++ ++.|++||+.+. +.+..+.. .
T Consensus 210 ~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~-----~~~~~~~~-~ 279 (337)
T 1pby_B 210 DPADPTAYRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKN-----ASIKRVPL-P 279 (337)
T ss_dssp CTTSGGGEEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTT-----EEEEEEEC-S
T ss_pred ccccccccccceEEEeCCC-CCceEeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCC-----cCcceecC-C
Confidence 268999987 433 3334556677889999999998 6666 789999999773 23444444 4
Q ss_pred CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 321 GEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 321 ~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..+.+++|+|+++++++++.++.|.+|++
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 57889999999998888888999999985
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=9.7e-24 Score=183.05 Aligned_cols=217 Identities=13% Similarity=0.095 Sum_probs=150.9
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCc------hhheec--cCCCCCCCcCceeEEEecCCCCCeEE--
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPET------RLECIL--NNNKNSDFCAPLTSFDWNEVDPNLLG-- 143 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~------~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~-- 143 (349)
..++.+++++++. ++++++ +.+++|+...... ...... .......+...|.+++|+| ++++|+
T Consensus 37 ~~~n~lavs~~~~-----~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~ 110 (434)
T 2oit_A 37 ERSSLLAVSNKYG-----LVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSAC 110 (434)
T ss_dssp SCCBCEEEETTTT-----EEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEE
T ss_pred CCccEEEEecCCC-----EEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEE
Confidence 4688999999887 788777 4888887532100 000000 0000011235799999998 889998
Q ss_pred --EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688 144 --TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII 221 (349)
Q Consensus 144 --~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 221 (349)
+|+.|+.|++||+.+.................+.+|...|.+++|+|+.. .+|++++.||+|++||++++....
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~--~~las~s~Dg~v~iwD~~~~~~~~-- 186 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP--SMVAVCLADGSIAVLQVTETVKVC-- 186 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT--TEEEEEETTSCEEEEEESSSEEEE--
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC--CEEEEEECCCeEEEEEcCCCccee--
Confidence 78889999999998751000000000011245667999999999999832 799999999999999999874322
Q ss_pred eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------CcceEEEEEeeCCCCEEEEEcCC
Q psy17688 222 YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------RACVNGIAWAPHSSCHICTAGDD 294 (349)
Q Consensus 222 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~l~~~~~d 294 (349)
....+...+.+++|+| ++.+|++|+.|+ .|++||++ +.....+..| ...|.++.|++++.++++..+.|
T Consensus 187 ~~~~~~~~v~~v~wsp-dg~~lasgs~dg-~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d 262 (434)
T 2oit_A 187 ATLPSTVAVTSVCWSP-KGKQLAVGKQNG-TVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD 262 (434)
T ss_dssp EEECGGGCEEEEEECT-TSSCEEEEETTS-CEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT
T ss_pred eccCCCCceeEEEEcC-CCCEEEEEcCCC-cEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC
Confidence 2234668899999999 899999999999 59999998 3334444332 34899999999888744455555
Q ss_pred Cc------EEEEEeecC
Q psy17688 295 HQ------ALIWDIQQM 305 (349)
Q Consensus 295 ~~------v~iwd~~~~ 305 (349)
|. +++|+++..
T Consensus 263 g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 263 GTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCSSSCCEEEEEECCCT
T ss_pred CccCCCCceEEEEeccC
Confidence 43 899999874
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=9.7e-23 Score=176.78 Aligned_cols=250 Identities=12% Similarity=0.131 Sum_probs=164.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc---------c---cccceEecCCCCeeEEEEecCCCCCCC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS---------E---FGPKSTIDHPYPTTKIMWIPDRKGVFP 91 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~---------~---~~~~~~~~~~~~v~~~~~~~~~~~~~~ 91 (349)
.+..+++++ ++.+ |++|+. ++ ++||....... . ........+...|.+++|+|+++
T Consensus 38 ~~n~lavs~--~~~~-l~~~~~----dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~---- 105 (434)
T 2oit_A 38 RSSLLAVSN--KYGL-VFAGGA----SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL---- 105 (434)
T ss_dssp CCBCEEEET--TTTE-EEEEET----TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC----
T ss_pred CccEEEEec--CCCE-EEEECC----CE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC----
Confidence 588899998 7775 888765 55 88887642100 0 11112345667899999999998
Q ss_pred cEEE----EeC-C-cEEEEECCCCCc---hh-heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce
Q psy17688 92 DLLA----TSG-D-YLRVWRAGEPET---RL-ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV 161 (349)
Q Consensus 92 ~~l~----~~~-~-~i~vw~~~~~~~---~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 161 (349)
+|+ +++ | .|+|||+.+... .. ..........+|...|.+++|+|..+.+|++++.||+|++||++++..
T Consensus 106 -~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 106 -TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp -EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred -EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 777 666 4 999999865310 00 000001112335589999999995589999999999999999998865
Q ss_pred eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-----CCCCceeEEEEe
Q psy17688 162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-----PQHTPLLRLAWN 236 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~ 236 (349)
. ....+|...|.+++|+|++ ++|++|+.||.|++||++ ++....+... .+...+.+++|+
T Consensus 185 ~-----------~~~~~~~~~v~~v~wspdg---~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 185 V-----------CATLPSTVAVTSVCWSPKG---KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp E-----------EEEECGGGCEEEEEECTTS---SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred e-----------eeccCCCCceeEEEEcCCC---CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 4 3456788899999999999 899999999999999998 3333222211 122379999999
Q ss_pred CCCCCeEEEEe-eCC-----cEEEEEeccCCCc--c-e-eEee-------cCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688 237 KQDPNYLAMVA-MNA-----CEVIILDVRVPCT--P-V-ARLN-------NHRACVNGIAWAPHSSCHICTAGDDHQALI 299 (349)
Q Consensus 237 ~~~~~~l~~~~-~d~-----~~i~v~d~~~~~~--~-~-~~~~-------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i 299 (349)
+ +..++++.+ .+| ..+++|++++... + . ..+. +.+.+-..+.+-++.+.++++.+..+.|.+
T Consensus 250 ~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~v 328 (434)
T 2oit_A 250 G-TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSI 328 (434)
T ss_dssp E-TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEE
T ss_pred c-CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeE
Confidence 9 666665433 332 1389999986321 1 1 1111 222333334444777775555555555555
Q ss_pred EEe
Q psy17688 300 WDI 302 (349)
Q Consensus 300 wd~ 302 (349)
...
T Consensus 329 l~~ 331 (434)
T 2oit_A 329 LAR 331 (434)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=2.3e-23 Score=200.17 Aligned_cols=277 Identities=11% Similarity=0.051 Sum_probs=208.0
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y 100 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~ 100 (349)
...+.++.|++ + . .++++.. ++.+.||.++...+.... +.+...+...+|+|+++ .|+.+.+ .
T Consensus 203 ~~~v~~~~~s~--d-~-l~~~~~~----dg~~~l~~~~~~g~~~~~---l~~~~~~~~~~~SpDG~-----~la~~~~~~ 266 (1045)
T 1k32_A 203 STHVSSPVIVG--H-R-IYFITDI----DGFGQIYSTDLDGKDLRK---HTSFTDYYPRHLNTDGR-----RILFSKGGS 266 (1045)
T ss_dssp SSCCEEEEEET--T-E-EEEEECT----TSSCEEEEEETTSCSCEE---CCCCCSSCEEEEEESSS-----CEEEEETTE
T ss_pred CCcccceEEeC--C-E-EEEEEec----cCceEEEEEeCCCCcceE---ecCCCCcceeeEcCCCC-----EEEEEeCCE
Confidence 36889999997 5 4 2556655 788899988755443322 22223577889999998 6777776 9
Q ss_pred EEEEECCCCCchhheeccCCCC------CCCcCceeEEEec-CCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688 101 LRVWRAGEPETRLECILNNNKN------SDFCAPLTSFDWN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK 173 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 173 (349)
|.+|++.... +. .+..+.. ..+...+.+++|+ | +++.|++++ ++.|.+|++..++..
T Consensus 267 i~~~d~~~~~--l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~----------- 330 (1045)
T 1k32_A 267 IYIFNPDTEK--IE-KIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVL----------- 330 (1045)
T ss_dssp EEEECTTTCC--EE-ECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEE-----------
T ss_pred EEEecCCceE--ee-eeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceE-----------
Confidence 9999984332 11 2222100 0122468899999 8 999888888 789999999877653
Q ss_pred eeeeccCC-ceeeEEEecCCCCccEEEEEcCCCcEE-EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 174 TQLIAHDK-EVYDIAFSRAGGGRDMFASVGAEGSVR-MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 174 ~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
.+..|.. .+..++|+ ++ +.++.++.++.+. +||+..++..... .+...+..++|+| ++++|++++.++
T Consensus 331 -~~~~~~~~~~~~~~~s-dg---~~l~~~s~~~~l~~~~d~~~~~~~~l~---~~~~~~~~~~~Sp-DG~~la~~~~~~- 400 (1045)
T 1k32_A 331 -KVPEPLRIRYVRRGGD-TK---VAFIHGTREGDFLGIYDYRTGKAEKFE---ENLGNVFAMGVDR-NGKFAVVANDRF- 400 (1045)
T ss_dssp -ECSCCSCEEEEEECSS-SE---EEEEEEETTEEEEEEEETTTCCEEECC---CCCCSEEEEEECT-TSSEEEEEETTS-
T ss_pred -EccCCCcceEEeeeEc-CC---CeEEEEECCCceEEEEECCCCCceEec---CCccceeeeEECC-CCCEEEEECCCC-
Confidence 3456666 79999999 88 7888888888888 9999876543222 4567899999999 999999999999
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC----------CcEEEEEeecCCCCCCCcEEEEeccCC
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD----------HQALIWDIQQMPRAIEDPILAYTAAGG 321 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~ 321 (349)
.|++||+.+ ++....+..|...+..++|+|+|++ |++++.+ +.|++||+.+. . ...+..|..
T Consensus 401 ~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g-----~-~~~l~~~~~ 472 (1045)
T 1k32_A 401 EIMTVDLET-GKPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGR-----K-IFAATTENS 472 (1045)
T ss_dssp EEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTT-----E-EEECSCSSS
T ss_pred eEEEEECCC-CceEEeccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCC-----c-EEEeeCCCc
Confidence 699999987 6666666688899999999999998 6666554 48999999873 2 455666778
Q ss_pred ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 322 EINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
.+..++|+|+|+.|++++.++...+|+
T Consensus 473 ~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp BEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred ccCCceEcCCCCEEEEEecccCCcCcc
Confidence 889999999999999888877666664
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=6.2e-23 Score=190.21 Aligned_cols=291 Identities=8% Similarity=0.043 Sum_probs=184.3
Q ss_pred ceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccce-EecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKS-TIDHPYPTTKIMWIPDRKGVFPDLLATS 97 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 97 (349)
.|.+++||| ||++ ||+++... ..++.+.+|+++.. +..... ...+...+..++|+||++ .||.+
T Consensus 62 ~v~~~~~Sp--Dg~~-l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~SPdG~-----~la~~ 131 (723)
T 1xfd_A 62 RAIRYEISP--DREY-ALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPEVSNAKLQYAGWGPKGQ-----QLIFI 131 (723)
T ss_dssp TCSEEEECT--TSSE-EEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTTCCSCCCSBCCBCSSTT-----CEEEE
T ss_pred ccceEEECC--CCCE-EEEEecCccceeecceeeEEEEECCCC--ceEeccCCccccccccccEECCCCC-----EEEEE
Confidence 489999999 9996 88886521 11378999988643 321111 113444589999999998 78877
Q ss_pred CC-cEEEEECCCCCchhheeccCCCCCC-------------CcCceeEEEecCCCCCeEEEEEcCC--------------
Q psy17688 98 GD-YLRVWRAGEPETRLECILNNNKNSD-------------FCAPLTSFDWNEVDPNLLGTSSIDT-------------- 149 (349)
Q Consensus 98 ~~-~i~vw~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~l~~~~~dg-------------- 149 (349)
++ .|++|++.+++.. .+...+.... ....+.++.|+| +++.|++++.|+
T Consensus 132 ~~~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 132 FENNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp ETTEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred ECCeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCc
Confidence 76 9999999876422 2222211100 011347899998 999999887653
Q ss_pred --------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC----CC
Q psy17688 150 --------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA----EG 205 (349)
Q Consensus 150 --------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----d~ 205 (349)
.|++||+.+++....+.. ...+..+...+..++|+|++ +++++.+. +.
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP-----PDDPRMREYYITMVKWATST---KVAVTWLNRAQNVS 280 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC-----CCCGGGSSEEEEEEEESSSS---EEEEEEEETTSCEE
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC-----CccCCCccceeEEEEEeCCC---eEEEEEEcCCCCeE
Confidence 788999888765321100 00111235678999999999 77766643 35
Q ss_pred cEEEEECCCCCceeeeeeCCCCCce----eEEEEeCCCCCeEEEE-e-eCC----c-EEEEEeccCCCc--ceeEeecCC
Q psy17688 206 SVRMFDLRHLEHSTIIYEDPQHTPL----LRLAWNKQDPNYLAMV-A-MNA----C-EVIILDVRVPCT--PVARLNNHR 272 (349)
Q Consensus 206 ~v~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~l~~~-~-~d~----~-~i~v~d~~~~~~--~~~~~~~~~ 272 (349)
.|++||+.+++....... .+...+ ..++|+| +++.|+.. + .++ . .|.+||....+. ....+..+.
T Consensus 281 ~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 281 ILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD 358 (723)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred EEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence 799999998775544322 222333 3789999 78766654 3 443 1 366777322133 144555444
Q ss_pred cceEE-EEEeeCCCCEEEEEcCC--CcEEEEEeecCCCCCCCcEEEEec---cCCceEEEEEcCCCCceEEEEc
Q psy17688 273 ACVNG-IAWAPHSSCHICTAGDD--HQALIWDIQQMPRAIEDPILAYTA---AGGEINQIQWGATQPDWIAICY 340 (349)
Q Consensus 273 ~~v~~-~~~~p~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~ 340 (349)
..+.. ++|+|+|+.+++++..+ +.+++|++...... ....+.. |...+..++|+|++++++..+.
T Consensus 359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF---NRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC---CCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC---CcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 44554 69999999844455555 78999998753221 1111222 4667889999999997776544
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=1.6e-22 Score=182.84 Aligned_cols=267 Identities=12% Similarity=0.080 Sum_probs=184.8
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-CCeeEEEEecCCCCCCCcEEEEeC--
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-YPTTKIMWIPDRKGVFPDLLATSG-- 98 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~l~~~~-- 98 (349)
..+|++++|+| ||++ ||+++. .+|.+.||.++ .++... ...+. ..+..+.|+|+ + ++++++
T Consensus 21 ~~~~~~~~~~~--DG~~-la~~s~---~~g~~~lw~~~--~g~~~~--lt~~~~~~~~~~~~spd-~-----~l~~~~~~ 84 (582)
T 3o4h_A 21 AVEKYSLQGVV--DGDK-LLVVGF---SEGSVNAYLYD--GGETVK--LNREPINSVLDPHYGVG-R-----VILVRDVS 84 (582)
T ss_dssp HSCEEEEEEEE--TTTE-EEEEEE---ETTEEEEEEEE--TTEEEE--CCSSCCSEECEECTTCS-E-----EEEEEECS
T ss_pred ccchheeecCC--CCCe-EEEEEc---cCCceeEEEEc--CCCcEe--eecccccccccccCCCC-e-----EEEEeccC
Confidence 36899999999 9995 887653 28899999984 344332 22344 58999999999 5 666543
Q ss_pred --C-cEEEEECCC--CCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 99 --D-YLRVWRAGE--PETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 99 --~-~i~vw~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
+ ...+|.+.. ..... .+... ..+...+|+| +++ .+++.+.++.+.+||+.+++..
T Consensus 85 ~g~~~~~l~~~~~~~~g~~~--~l~~~------~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~---------- 145 (582)
T 3o4h_A 85 KGAEQHALFKVNTSRPGEEQ--RLEAV------KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLR---------- 145 (582)
T ss_dssp TTSCCEEEEEEETTSTTCCE--ECTTS------CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEE----------
T ss_pred CCCcceEEEEEeccCCCccc--cccCC------CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEE----------
Confidence 2 556665543 22111 11111 1233557777 553 3444444555669999988764
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
.+..+.. .+++|+|++ +.+++++.+ +.|++||+.+++.... ..+...+..++|+| +++.|+++..
T Consensus 146 --~l~~~~~--~~~~~spDG---~~la~~~~~~~~~~~i~~~d~~~g~~~~l---~~~~~~~~~~~~Sp-DG~~l~~~~~ 214 (582)
T 3o4h_A 146 --ELARLPG--FGFVSDIRG---DLIAGLGFFGGGRVSLFTSNLSSGGLRVF---DSGEGSFSSASISP-GMKVTAGLET 214 (582)
T ss_dssp --EEEEESS--CEEEEEEET---TEEEEEEEEETTEEEEEEEETTTCCCEEE---CCSSCEEEEEEECT-TSCEEEEEEC
T ss_pred --EeecCCC--ceEEECCCC---CEEEEEEEcCCCCeEEEEEcCCCCCceEe---ecCCCccccceECC-CCCEEEEccC
Confidence 2223333 889999999 899988776 7899999998765432 24567789999999 9999997777
Q ss_pred CC-cEEEEEeccCCCcceeEeecCCcceEEEE--------EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688 249 NA-CEVIILDVRVPCTPVARLNNHRACVNGIA--------WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA 319 (349)
Q Consensus 249 d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~--------~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 319 (349)
++ ..|++||+.. ++.. .+..|...+..+. |+||| .++++++.|+.+++|++ . +. ...+
T Consensus 215 ~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g-~~--------~~~~ 281 (582)
T 3o4h_A 215 AREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-G-ER--------VEAP 281 (582)
T ss_dssp SSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-T-EE--------ECCC
T ss_pred CCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-C-Ce--------eccC
Confidence 76 1499999986 5555 6677777777777 99999 55999999999999999 2 11 1123
Q ss_pred CCceEEEEEcCCCCceEEEEcCC---eEEEee
Q psy17688 320 GGEINQIQWGATQPDWIAICYNK---YLEVLR 348 (349)
Q Consensus 320 ~~~v~~~~~~~~~~~l~~~~~d~---~v~vw~ 348 (349)
.+.+.+++|+ ++..+++++.+. .+.+|+
T Consensus 282 ~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 282 QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp SSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 5678899999 888777777763 355543
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=7e-23 Score=189.34 Aligned_cols=279 Identities=11% Similarity=0.106 Sum_probs=181.5
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-----------------CCeeEEEEecCC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-----------------YPTTKIMWIPDR 86 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~ 86 (349)
.+..+.|+ +++ +++++. ++ | +|++.. ++........+. ..|.+++|+|+
T Consensus 27 ~~~~~~w~---g~~--~~~~~~----~~-i-~~d~~t--g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd- 92 (706)
T 2z3z_A 27 YVVGLQWM---GDN--YVFIEG----DD-L-VFNKAN--GKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR- 92 (706)
T ss_dssp -CTTCEEE---TTE--EEEEET----TE-E-EEEC---------CEEEEHHHHHTTC-----------CCCEEEEETTT-
T ss_pred cCCCCcCc---CCe--EEEEeC----Cc-E-EEECCC--CcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-
Confidence 45667888 444 555554 56 8 998753 333101112221 56999999999
Q ss_pred CCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC-----cc
Q psy17688 87 KGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET-----NQ 160 (349)
Q Consensus 87 ~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~ 160 (349)
. .++.+.+ .|++||+.+++. . .+..+. ..+.+++|+| +++.|+++ .++.|++||+.+ ++
T Consensus 93 ~-----~~~~~~~~~i~~~d~~~~~~--~-~l~~~~-----~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 93 G-----LVVLFTQGGLVGFDMLARKV--T-YLFDTN-----EETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp T-----EEEEEETTEEEEEETTTTEE--E-EEECCT-----TCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred C-----eEEEEECCEEEEEECCCCce--E-EccCCc-----ccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 4 4444455 999999987642 1 122222 4577899998 99998885 679999999988 66
Q ss_pred eeeeecccCCcee---eeeeccCCceeeEEEecCCCCccEEEEEc---------------------------------CC
Q psy17688 161 VVGRVNSVSGHVK---TQLIAHDKEVYDIAFSRAGGGRDMFASVG---------------------------------AE 204 (349)
Q Consensus 161 ~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---------------------------------~d 204 (349)
............. .....+...+.+++|+|++ +.|++++ .+
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG---SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS---SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCC---CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 5421100000000 0001111235899999999 7888887 45
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCCcceeEee--cCCc---ce
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPCTPVARLN--NHRA---CV 275 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~~~~~~~~--~~~~---~v 275 (349)
..|++||+.+++.........+...+.+++|+| +++.|++++.++ ..|.+||+.+ ++....+. .+.. .+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeECcc
Confidence 679999999876443332224556789999999 999898887664 1599999987 42333332 2222 24
Q ss_pred EEEEEee--CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE-EEEcCCCCceEEEEcC
Q psy17688 276 NGIAWAP--HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ-IQWGATQPDWIAICYN 341 (349)
Q Consensus 276 ~~~~~~p--~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d 341 (349)
..+.|+| +|++ +++++.|+.+++|++... ...+..+..|...+.. ++|+|+++.|++++.+
T Consensus 313 ~~~~~sp~~dg~~-l~~~~~~g~~~l~~~~~~----~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 313 HPLTFLPGSNNQF-IWQSRRDGWNHLYLYDTT----GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SCCEECTTCSSEE-EEEECTTSSCEEEEEETT----SCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred CCceeecCCCCEE-EEEEccCCccEEEEEECC----CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 6789999 9997 899999999999998731 2234556666777877 7999999988777665
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=6.4e-22 Score=163.01 Aligned_cols=216 Identities=11% Similarity=0.133 Sum_probs=159.6
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC-cceeeeecccCCceeeeeec
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET-NQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|++||+.+++.. .+..+ ...+.+++|+| ++++|++++ ++.|.+||+.+ ++.. .....
T Consensus 23 ~i~~~d~~~~~~~---~~~~~-----~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~-----------~~~~~ 81 (297)
T 2ojh_A 23 SIEIFNIRTRKMR---VVWQT-----PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPE-----------KVDTG 81 (297)
T ss_dssp EEEEEETTTTEEE---EEEEE-----SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCE-----------ECCCT
T ss_pred eEEEEeCCCCcee---eeccC-----CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCce-----------Eeccc
Confidence 9999999876522 22222 36799999998 899999886 78999999998 6654 23334
Q ss_pred c-CCceeeEEEecCCCCccEEEEEc--CCCcEEEE--ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE-EEeeCCcE
Q psy17688 179 H-DKEVYDIAFSRAGGGRDMFASVG--AEGSVRMF--DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA-MVAMNACE 252 (349)
Q Consensus 179 ~-~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~~ 252 (349)
+ ...+.+++|+|++ +.+++++ .++...+| |+.+++. ..+ .....+..++|+| +++.|+ ++..++ .
T Consensus 82 ~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~~~~sp-dg~~l~~~~~~~~-~ 152 (297)
T 2ojh_A 82 FATICNNDHGISPDG---ALYAISDKVEFGKSAIYLLPSTGGTP-RLM---TKNLPSYWHGWSP-DGKSFTYCGIRDQ-V 152 (297)
T ss_dssp TCCCBCSCCEECTTS---SEEEEEECTTTSSCEEEEEETTCCCC-EEC---CSSSSEEEEEECT-TSSEEEEEEEETT-E
T ss_pred cccccccceEECCCC---CEEEEEEeCCCCcceEEEEECCCCce-EEe---ecCCCccceEECC-CCCEEEEEECCCC-c
Confidence 4 3678999999999 7888888 33455555 4444432 222 2334588999999 777666 777888 6
Q ss_pred EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ 332 (349)
Q Consensus 253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 332 (349)
+++|++.........+..+...+.++.|+|+++.+++++..++.+++|++.... .....+..|...+..++|+|++
T Consensus 153 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 153 FDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG----SSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp EEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS----SCEEECCCCSEEEEEEEECTTS
T ss_pred eEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC----CCcEEEecCCcccCCeEECCCC
Confidence 999997654555666777888999999999999844455569999999997422 2345666677889999999999
Q ss_pred CceEEEEcC-----------CeEEEeeC
Q psy17688 333 PDWIAICYN-----------KYLEVLRV 349 (349)
Q Consensus 333 ~~l~~~~~d-----------~~v~vw~v 349 (349)
++|++++.+ +.|.+|++
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEec
Confidence 988887765 56888874
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=7.1e-22 Score=189.80 Aligned_cols=244 Identities=12% Similarity=0.080 Sum_probs=174.2
Q ss_pred cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688 72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT 149 (349)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 149 (349)
+|...+.++.|+++ . ++++++ + .+.||.++...... ..+..+ ..+...+|+| +++.|+.+ .++
T Consensus 201 ~~~~~v~~~~~s~d-~-----l~~~~~~dg~~~l~~~~~~g~~~-~~l~~~------~~~~~~~~Sp-DG~~la~~-~~~ 265 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-R-----IYFITDIDGFGQIYSTDLDGKDL-RKHTSF------TDYYPRHLNT-DGRRILFS-KGG 265 (1045)
T ss_dssp CCSSCCEEEEEETT-E-----EEEEECTTSSCEEEEEETTSCSC-EECCCC------CSSCEEEEEE-SSSCEEEE-ETT
T ss_pred CCCCcccceEEeCC-E-----EEEEEeccCceEEEEEeCCCCcc-eEecCC------CCcceeeEcC-CCCEEEEE-eCC
Confidence 56777888899888 3 766666 4 88888765432111 222222 2345679998 88888887 489
Q ss_pred eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
.|.+||+...+.. .+.............|...+.+++|+ |++ +.+++++ ++.+.+|++..++... ...+..
T Consensus 266 ~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG---~~la~~~-~~~i~~~~~~~~~~~~---~~~~~~ 337 (1045)
T 1k32_A 266 SIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDG---DLIAFVS-RGQAFIQDVSGTYVLK---VPEPLR 337 (1045)
T ss_dssp EEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGG---GCEEEEE-TTEEEEECTTSSBEEE---CSCCSC
T ss_pred EEEEecCCceEee-eeccCcccccccccccccccceeeecCCCC---CEEEEEE-cCEEEEEcCCCCceEE---ccCCCc
Confidence 9999999443322 21110000011122355679999999 999 7888877 7899999998765332 123445
Q ss_pred -ceeEEEEeCCCCCeEEEEeeCCcEEE-EEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688 229 -PLLRLAWNKQDPNYLAMVAMNACEVI-ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306 (349)
Q Consensus 229 -~v~~~~~~~~~~~~l~~~~~d~~~i~-v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~ 306 (349)
.+..++|+ ++..|+.++.+. .+. +||+.. +. ...+..|...+..++|+|+|+. |++++.++.|++||+.++
T Consensus 338 ~~~~~~~~s--dg~~l~~~s~~~-~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~tg- 410 (1045)
T 1k32_A 338 IRYVRRGGD--TKVAFIHGTREG-DFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETG- 410 (1045)
T ss_dssp EEEEEECSS--SEEEEEEEETTE-EEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTC-
T ss_pred ceEEeeeEc--CCCeEEEEECCC-ceEEEEECCC-CC-ceEecCCccceeeeEECCCCCE-EEEECCCCeEEEEECCCC-
Confidence 78999999 777888887777 588 899875 33 3444477889999999999998 999999999999999873
Q ss_pred CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC----------eEEEeeC
Q psy17688 307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK----------YLEVLRV 349 (349)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~v~vw~v 349 (349)
........|...+.+++|+|+|++|++++.++ .|++|++
T Consensus 411 ----~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 411 ----KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp ----CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred ----ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 33455557888999999999999888877644 8999975
No 151
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=5.3e-21 Score=162.68 Aligned_cols=279 Identities=8% Similarity=0.045 Sum_probs=181.2
Q ss_pred EEEEEeeecccCCeEEEEeccccccccccceEe--cCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECC-CCCchhh
Q psy17688 39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAG-EPETRLE 114 (349)
Q Consensus 39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~-~~~~~~~ 114 (349)
.|.+|++. .++.|.+|+++..++++...... .....+..++|+|+++ +|++++. .|.+|++. +++. .
T Consensus 4 ~~~vg~~~--~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-----~l~~~~~~~v~~~~~~~~g~~--~ 74 (365)
T 1jof_A 4 HLMIGTWT--PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-----NIYGAAMKKWSSFAVKSPTEI--V 74 (365)
T ss_dssp EEEEEESS--SSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-----EEEEEEBTEEEEEEEEETTEE--E
T ss_pred EEEEEEcc--CCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-----EEEEEccceEEEEEECCCCCE--E
Confidence 47788872 13579999988777766543332 2335788999999998 7776664 99999986 5432 1
Q ss_pred eeccCCCCCCCcCceeEEEecCCCCCe--EEEEE-------------cCCeEEEEeccC-cceeeeecccCCceeeeee-
Q psy17688 115 CILNNNKNSDFCAPLTSFDWNEVDPNL--LGTSS-------------IDTTCTIWCLET-NQVVGRVNSVSGHVKTQLI- 177 (349)
Q Consensus 115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~- 177 (349)
....... . ....+++|+| +++. +++++ .+|.+.+|++.. ++....+ ..+.
T Consensus 75 ~~~~~~~-~---g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~--------~~~~~ 141 (365)
T 1jof_A 75 HEASHPI-G---GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV--------QNYEY 141 (365)
T ss_dssp EEEEEEC-C---SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE--------EEEEC
T ss_pred EeeEeec-C---CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE--------eeEEe
Confidence 1111110 0 1244588888 8874 45553 689999999974 4443111 1111
Q ss_pred ccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECC-CCCceeee-eeC-CCCCceeEEEEeCCCCCeEEEEee-CCcE
Q psy17688 178 AHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLR-HLEHSTII-YED-PQHTPLLRLAWNKQDPNYLAMVAM-NACE 252 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~-~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~~l~~~~~-d~~~ 252 (349)
.+...+.+++|+|++ ++++++. .++.|++||+. +++..... ... .+...+..++|+| +++++++++. ++ .
T Consensus 142 ~~~~~~~~~~~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~-~ 216 (365)
T 1jof_A 142 QENTGIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGN-R 216 (365)
T ss_dssp CTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTT-E
T ss_pred CCCCcceEEEECCCC---CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCC-e
Confidence 245678999999999 6676654 46899999998 55432211 111 1246689999999 8988888876 45 6
Q ss_pred EEEEeccCC-Ccce---eEee-------cCCc------ceEEEE-EeeCCCCEEEEEcC-CC-----cEEEEEeecCCCC
Q psy17688 253 VIILDVRVP-CTPV---ARLN-------NHRA------CVNGIA-WAPHSSCHICTAGD-DH-----QALIWDIQQMPRA 308 (349)
Q Consensus 253 i~v~d~~~~-~~~~---~~~~-------~~~~------~v~~~~-~~p~~~~~l~~~~~-d~-----~v~iwd~~~~~~~ 308 (349)
|.+|++... ++.. ..+. +|.. .+..++ |+|+|++ |++++. ++ .|.+|++...
T Consensus 217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~-l~v~~~~~~~~~~~~i~v~~~~~~--- 292 (365)
T 1jof_A 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY-MFASSRANKFELQGYIAGFKLRDC--- 292 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE-EEEEEEESSTTSCCEEEEEEECTT---
T ss_pred EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE-EEEECCCCCCCCCCeEEEEEECCC---
Confidence 999987531 3321 1221 1222 588999 9999998 555543 33 8999999731
Q ss_pred CCCcEE---EEeccCCceEEEEEcC---CCCceEEEEcC-CeEEEeeC
Q psy17688 309 IEDPIL---AYTAAGGEINQIQWGA---TQPDWIAICYN-KYLEVLRV 349 (349)
Q Consensus 309 ~~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d-~~v~vw~v 349 (349)
..... ....+...+..++|+| ++++|++++.+ +.|.+|++
T Consensus 293 -g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 293 -GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp -SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred -CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 11111 1333455678899999 89988888775 89999974
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=4.9e-21 Score=161.71 Aligned_cols=282 Identities=11% Similarity=0.078 Sum_probs=174.6
Q ss_pred eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEE
Q psy17688 27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVW 104 (349)
Q Consensus 27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw 104 (349)
.+++++ ++++ +++++. ++.|.+|++. +++............+..++|+|+++. +++++. + .|.+|
T Consensus 4 g~~~~~--~~~~-~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~----~~v~~~~~~~i~~~ 70 (349)
T 1jmx_B 4 GPALKA--GHEY-MIVTNY----PNNLHVVDVA--SDTVYKSCVMPDKFGPGTAMMAPDNRT----AYVLNNHYGDIYGI 70 (349)
T ss_dssp CCCCCT--TCEE-EEEEET----TTEEEEEETT--TTEEEEEEECSSCCSSCEEEECTTSSE----EEEEETTTTEEEEE
T ss_pred cccccC--CCEE-EEEeCC----CCeEEEEECC--CCcEEEEEecCCCCCCceeEECCCCCE----EEEEeCCCCcEEEE
Confidence 345665 6764 888877 9999999875 344433322222226889999999972 444544 4 99999
Q ss_pred ECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------------CeEEEEeccCcceeeeecccCCce
Q psy17688 105 RAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------------TTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
|+.+++....... .+........+.+++|+| +++++++++.+ +.|.+||+.+++....
T Consensus 71 d~~t~~~~~~~~~-~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-------- 140 (349)
T 1jmx_B 71 DLDTCKNTFHANL-SSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-------- 140 (349)
T ss_dssp ETTTTEEEEEEES-CCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC--------
T ss_pred eCCCCcEEEEEEc-ccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccce--------
Confidence 9987643211111 110000013467899998 89999988865 8999999988654311
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC----------------------ce
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT----------------------PL 230 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~----------------------~v 230 (349)
...+. +...+.+++|+|++ + +++++. .|.+||+.+++....+....... ..
T Consensus 141 ~~~~~-~~~~~~~~~~s~dg---~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (349)
T 1jmx_B 141 VRTFP-MPRQVYLMRAADDG---S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML 213 (349)
T ss_dssp SEEEE-CCSSCCCEEECTTS---C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred eeecc-CCCcccceeECCCC---c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence 12222 33468899999999 7 555544 49999999876544332211000 23
Q ss_pred eEEEEeCCCCCeE-EEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688 231 LRLAWNKQDPNYL-AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRA 308 (349)
Q Consensus 231 ~~~~~~~~~~~~l-~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~ 308 (349)
..+++++ ++... ....... .+..+|..+.......+..+...+..++|+| ++++ ++++ ++.|.+||+.+.
T Consensus 214 ~~~~~~~-d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~-l~~~--~~~v~~~d~~~~--- 285 (349)
T 1jmx_B 214 YTIARFK-DDKQDPATADLLY-GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-IYGV--LNRLAKYDLKQR--- 285 (349)
T ss_dssp EEEEEC--------CCCEEEE-EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE-EEEE--ESEEEEEETTTT---
T ss_pred eeeeecC-CCcCCccccccce-eEEEEeccCCcEEecccccCCCcceeeEecCCCCCE-EEEE--cCeEEEEECccC---
Confidence 3455554 22111 0000111 1223455442222222333566788999999 9998 6666 889999999873
Q ss_pred CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+.+..+.. ...+.+++|+|++++|++++.++.|.+|++
T Consensus 286 --~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 286 --KLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp --EEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred --eEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 23344443 456789999999998998888899999985
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=2.2e-20 Score=157.79 Aligned_cols=256 Identities=10% Similarity=0.110 Sum_probs=165.5
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG- 98 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~- 98 (349)
....+..++|+| ||+ .++++.. ..++.|.+|+++. ++...... ..+...+..++|+|+++ +|++++
T Consensus 38 ~~~~p~~~a~sp--dg~-l~~~~~~--~~~~~v~~~~~~~--g~~~~~~~~~~~~~~p~~~a~spdg~-----~l~~~~~ 105 (347)
T 3hfq_A 38 ATQNPTYLALSA--KDC-LYSVDKE--DDEGGIAAWQIDG--QTAHKLNTVVAPGTPPAYVAVDEARQ-----LVYSANY 105 (347)
T ss_dssp ECSCCCCEEECT--TCE-EEEEEEE--TTEEEEEEEEEET--TEEEEEEEEEEESCCCSEEEEETTTT-----EEEEEET
T ss_pred ccCCcceEEEcc--CCe-EEEEEec--CCCceEEEEEecC--CcEEEeeeeecCCCCCEEEEECCCCC-----EEEEEeC
Confidence 345677899998 998 3444432 2258899999853 33222222 34667899999999998 565554
Q ss_pred -C-cEEEEECCCCC-chhheeccCCCC----CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc-CcceeeeecccCC
Q psy17688 99 -D-YLRVWRAGEPE-TRLECILNNNKN----SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE-TNQVVGRVNSVSG 170 (349)
Q Consensus 99 -~-~i~vw~~~~~~-~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~ 170 (349)
+ .|.+|++.... ............ ......+.+++|+| +++++++...++.|.+|++. +++...
T Consensus 106 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~------- 177 (347)
T 3hfq_A 106 HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSE------- 177 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEE-------
T ss_pred CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEE-------
Confidence 3 89999996432 111111111100 01223578899998 77777766778899999998 443321
Q ss_pred ceeeeeec-cCCceeeEEEecCCCCcc-EEEEEcCCCcEEEEECCC--CCcee--eeeeCCC----CCceeEEEEeCCCC
Q psy17688 171 HVKTQLIA-HDKEVYDIAFSRAGGGRD-MFASVGAEGSVRMFDLRH--LEHST--IIYEDPQ----HTPLLRLAWNKQDP 240 (349)
Q Consensus 171 ~~~~~~~~-~~~~v~~~~~~~~~~~~~-~l~~~~~d~~v~iwd~~~--~~~~~--~~~~~~~----~~~v~~~~~~~~~~ 240 (349)
...+.. ....+..++|+|++ + ++++...++.|.+|++.. ++... ....... ...+..++|+| ++
T Consensus 178 --~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG 251 (347)
T 3hfq_A 178 --QSVLTMEAGFGPRHLVFSPDG---QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DG 251 (347)
T ss_dssp --EEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TS
T ss_pred --eeeEEcCCCCCCceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CC
Confidence 011222 22357789999999 6 555567889999999885 32211 1111111 14588899999 88
Q ss_pred CeEEEEe-eCCcEEEEEeccCCC--cceeEeecCCcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeec
Q psy17688 241 NYLAMVA-MNACEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQ 304 (349)
Q Consensus 241 ~~l~~~~-~d~~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~ 304 (349)
++|+++. .++ .|.+||+...+ ..+..+..+...+..++|+|+|++ |+++ ..++.|.+|++..
T Consensus 252 ~~l~v~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 252 HFLYVSNRGYN-TLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF-VVVVNQNTDNATLYARDL 317 (347)
T ss_dssp CEEEEEEETTT-EEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE-EEEEETTTTEEEEEEECT
T ss_pred CEEEEEeCCCC-EEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE-EEEEEcCCCcEEEEEEeC
Confidence 8775554 467 69999997422 445555666667899999999998 5555 4568999997754
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=8.1e-21 Score=159.33 Aligned_cols=233 Identities=8% Similarity=-0.020 Sum_probs=162.2
Q ss_pred EecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccC
Q psy17688 82 WIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLET 158 (349)
Q Consensus 82 ~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 158 (349)
|.++... ++++++ + .|.+||+.+++... ....+ .... .++|+| +++.+++++. ++.|.+||+.+
T Consensus 5 ~~~~~~~----~~v~~~~~~~v~~~d~~~~~~~~--~~~~~-----~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 5 FQTTSNF----GIVVEQHLRRISFFSTDTLEILN--QITLG-----YDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQL 71 (331)
T ss_dssp --CCCCE----EEEEEGGGTEEEEEETTTCCEEE--EEECC-----CCEE-EEEECS-SSCEEEEEESTTCEEEEEECSS
T ss_pred EcCCCCE----EEEEecCCCeEEEEeCcccceee--eEEcc-----CCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCC
Confidence 5555542 566666 4 99999998875322 22221 1345 899998 7876666555 88999999998
Q ss_pred cce-eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688 159 NQV-VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 159 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 234 (349)
++. . ..+..+..+..+++|+|++ ++++++..++ .|.+||+.+++....+. .......++
T Consensus 72 ~~~~~-----------~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~ 134 (331)
T 3u4y_A 72 EPPKV-----------VAIQEGQSSMADVDITPDD---QFAVTVTGLNHPFNMQSYSFLKNKFISTIP---IPYDAVGIA 134 (331)
T ss_dssp SSCEE-----------EEEEECSSCCCCEEECTTS---SEEEECCCSSSSCEEEEEETTTTEEEEEEE---CCTTEEEEE
T ss_pred CceeE-----------EecccCCCCccceEECCCC---CEEEEecCCCCcccEEEEECCCCCeEEEEE---CCCCccceE
Confidence 876 4 4455666666669999999 7888555553 89999999876554432 345578999
Q ss_pred EeCCCCCeEEEEeeC-CcE-EEEEeccCCCcce---eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688 235 WNKQDPNYLAMVAMN-ACE-VIILDVRVPCTPV---ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI 309 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d-~~~-i~v~d~~~~~~~~---~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~ 309 (349)
|+| +++++++++.+ + . |.+|++...+... .........+..++|+|+|+++++++..++.|++||+.....
T Consensus 135 ~sp-dg~~l~~~~~~~~-~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-- 210 (331)
T 3u4y_A 135 ISP-NGNGLILIDRSSA-NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-- 210 (331)
T ss_dssp ECT-TSSCEEEEEETTT-TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS--
T ss_pred ECC-CCCEEEEEecCCC-ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc--
Confidence 999 77766655544 5 6 9999987533221 122233456899999999997567777899999999987432
Q ss_pred CCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688 310 EDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV 349 (349)
Q Consensus 310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v 349 (349)
..++..+.. ...+.+++|+|+++++++++. ++.|.+|++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 211 ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 111455554 567889999999997777665 688999874
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=1.6e-20 Score=158.81 Aligned_cols=237 Identities=12% Similarity=0.090 Sum_probs=171.7
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEEeC--------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCe-E
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLATSG--------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNL-L 142 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~~~--------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l 142 (349)
....+..++|+|+++ .+++++ + .|.+||..+.+... ..... ..+..++|+| +++. +
T Consensus 39 ~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~------~~~~~~~~s~-dg~~l~ 104 (353)
T 3vgz_A 39 VGKGAYEMAYSQQEN-----ALWLATSQSRKLDKGGVVYRLDPVTLEVTQ--AIHND------LKPFGATINN-TTQTLW 104 (353)
T ss_dssp EESSEEEEEEETTTT-----EEEEEECCCTTTEESEEEEEECTTTCCEEE--EEEES------SCCCSEEEET-TTTEEE
T ss_pred hccCccceEECCCCC-----EEEEEcCCCcCCCCCccEEEEcCCCCeEEE--EEecC------CCcceEEECC-CCCEEE
Confidence 445788999999998 444443 4 79999998765322 22211 3456789998 7774 4
Q ss_pred EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC---------ceeeEEEecCCCCccEEEEEc--CCCcEEEEE
Q psy17688 143 GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK---------EVYDIAFSRAGGGRDMFASVG--AEGSVRMFD 211 (349)
Q Consensus 143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd 211 (349)
++...++.|.+||+.+++... .+..+.. .+.+++|+|++ +.+++++ .++.|.+||
T Consensus 105 v~~~~~~~v~~~d~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEVKG-----------RLVLDDRKRTEEVRPLQPRELVADDAT---NTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEETTTTEEEEEETTTCCEEE-----------EEESCCCCCCSSCCCCEEEEEEEETTT---TEEEEEEESSSCEEEEEE
T ss_pred EEecCCCEEEEEeCCCCeeEE-----------EEecCCCccccccCCCCCceEEECCCC---CEEEEEecCCCceEEEEc
Confidence 555667999999999988763 2332221 26889999998 5555554 588999999
Q ss_pred CCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec----CCcceEEEEEeeCCCCE
Q psy17688 212 LRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN----HRACVNGIAWAPHSSCH 287 (349)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~ 287 (349)
+++++....+. .....+..++|+| +++++++++.++ .|.+||+.+ ++.+..+.. +...+..++|+|+++++
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~s~-dg~~l~~~~~~~-~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 171 GGNIKLKTAIQ--NTGKMSTGLALDS-EGKRLYTTNADG-ELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp TTTTEEEEEEC--CCCTTCCCCEEET-TTTEEEEECTTS-EEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred CCCCceEEEec--CCCCccceEEECC-CCCEEEEEcCCC-eEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 99876544432 1345588999999 999999999998 699999987 666666653 45568899999999985
Q ss_pred EEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688 288 ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-YNKYLEVLRV 349 (349)
Q Consensus 288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v 349 (349)
+++...++.|.+||+.+. +.+..+.. .. ...++|+|+++.+++++ .++.|.+|++
T Consensus 246 ~~~~~~~~~v~~~d~~~~-----~~~~~~~~-~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNG-----NILAKVAA-PE-SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEEESSSSEEEEEETTTC-----CEEEEEEC-SS-CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCEEEEEECCCC-----cEEEEEEc-CC-CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 555556699999999773 33444444 22 26799999998777776 4799999974
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=2.7e-19 Score=151.98 Aligned_cols=284 Identities=12% Similarity=0.065 Sum_probs=176.0
Q ss_pred cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688 21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFPDLLATSG- 98 (349)
Q Consensus 21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~- 98 (349)
....+..++|+| ||++ |++++..++.++.|.+|+++..++++....... +...+..+++ +++ .|++++
T Consensus 48 ~~~~p~~l~~sp--dg~~-l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-----~l~~~~~ 117 (361)
T 3scy_A 48 EVANPSYLIPSA--DGKF-VYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-----NIVTANY 117 (361)
T ss_dssp ECSCCCSEEECT--TSSE-EEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-----EEEEEET
T ss_pred cCCCCceEEECC--CCCE-EEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-----EEEEEEC
Confidence 345677899998 9995 877766211348999999987656654443332 4556777877 665 444443
Q ss_pred -C-cEEEEECCCCCchhhe--ec--cCCC---CCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcce------e
Q psy17688 99 -D-YLRVWRAGEPETRLEC--IL--NNNK---NSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQV------V 162 (349)
Q Consensus 99 -~-~i~vw~~~~~~~~~~~--~~--~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~ 162 (349)
+ .|.+|++......... .. .+.. .......+.+++|+| +++++++++ .++.|.+|++..... +
T Consensus 118 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 118 SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCC
T ss_pred CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccce
Confidence 4 9999999754321111 00 0000 011223467899998 888665554 578999999875442 1
Q ss_pred eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCceee--eee-CCCCCceeEEEEeCC
Q psy17688 163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHSTI--IYE-DPQHTPLLRLAWNKQ 238 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~--~~~-~~~~~~v~~~~~~~~ 238 (349)
... +........+...+..++|+|++ +++++++ .++.|.+||+.+++.... ... ..+......++|+|
T Consensus 197 ~~~----~~~~~~~~~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp- 268 (361)
T 3scy_A 197 LTK----GTPEAFKVAPGSGPRHLIFNSDG---KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP- 268 (361)
T ss_dssp EEE----EEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-
T ss_pred eec----ccccceecCCCCCCeEEEEcCCC---CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-
Confidence 000 00001122334557899999999 6665555 789999999986543221 111 12234568999999
Q ss_pred CCCeEEEEeeC--CcEEEEEeccCC-Cc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688 239 DPNYLAMVAMN--ACEVIILDVRVP-CT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI 313 (349)
Q Consensus 239 ~~~~l~~~~~d--~~~i~v~d~~~~-~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 313 (349)
++++|+++..+ + .|.+|++... +. .+..+.. ...+..++|+|+|++++++...++.|.+|++..... + +
T Consensus 269 dg~~l~v~~~~~~~-~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g---~-~ 342 (361)
T 3scy_A 269 DGKYLYASNRLKAD-GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG---L-L 342 (361)
T ss_dssp TSSEEEEEECSSSC-EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC---C-E
T ss_pred CCCEEEEECCCCCC-EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC---c-E
Confidence 89988777665 6 6999999621 22 3444444 457889999999998444444789999987764221 1 1
Q ss_pred EEEe--ccCCceEEEEEc
Q psy17688 314 LAYT--AAGGEINQIQWG 329 (349)
Q Consensus 314 ~~~~--~~~~~v~~~~~~ 329 (349)
.... .+...+.++.|.
T Consensus 343 ~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 343 TDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EECSCCEECSSEEEEEEE
T ss_pred eecceeeeCCCCeEEEEc
Confidence 1111 134567888875
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=7e-21 Score=159.92 Aligned_cols=246 Identities=11% Similarity=-0.013 Sum_probs=170.0
Q ss_pred cceeeeeecCC---ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC----CCCeeEEEEecC
Q psy17688 13 QKEIYKYEAPW---PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH----PYPTTKIMWIPD 85 (349)
Q Consensus 13 ~~~~~~~~~~~---~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~ 85 (349)
.+.+..+..+. .+..++|+| +|++.++++.. ++.|.+|++. +++........+ ...+..++|+|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~d 92 (337)
T 1pby_B 21 MAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNK----SESLVKIDLV--TGETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp TEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETT----TTEEEEEETT--TCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred CcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCC----CCeEEEEECC--CCCeEeeEEcCCcccccccccceEECCC
Confidence 44555666555 689999999 99853444444 7899999875 344333222222 126789999999
Q ss_pred CCCCCCcEEEEe-------------CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 86 RKGVFPDLLATS-------------GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 86 ~~~~~~~~l~~~-------------~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
++ .++++ .+ .|.+||+.+.+.. ..+.. ...+.+++|+| +++.|+++ ++.|
T Consensus 93 g~-----~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~------~~~~~~~~~s~-dg~~l~~~--~~~i 156 (337)
T 1pby_B 93 GK-----TLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFEA------PRQITMLAWAR-DGSKLYGL--GRDL 156 (337)
T ss_dssp SS-----EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEEC------CSSCCCEEECT-TSSCEEEE--SSSE
T ss_pred CC-----EEEEEecccccccccccccCceEEEEECCCCcEE--EEEeC------CCCcceeEECC-CCCEEEEe--CCeE
Confidence 98 56555 34 9999999875422 12221 13467789998 88878777 6899
Q ss_pred EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCC-----------------------cE
Q psy17688 152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEG-----------------------SV 207 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~-----------------------~v 207 (349)
.+||+.+++... .+..+. ....+.|+|++ ..++..+ .++ .|
T Consensus 157 ~~~d~~~~~~~~-----------~~~~~~-~~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 157 HVMDPEAGTLVE-----------DKPIQS-WEAETYAQPDV---LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp EEEETTTTEEEE-----------EECSTT-TTTTTBCCCBC---CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred EEEECCCCcEee-----------eeeccc-cCCCceeCCCc---cEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 999999887762 232222 11234778888 4443333 333 46
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH 287 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 287 (349)
.+||+++++.. ......+...+..++|+| ++++++++ ++ .|.+||+.+ ++.+..+.. ...+.+++|+|++++
T Consensus 222 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~-~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~- 293 (337)
T 1pby_B 222 LTMDLETGEMA-MREVRIMDVFYFSTAVNP-AKTRAFGA--YN-VLESFDLEK-NASIKRVPL-PHSYYSVNVSTDGST- 293 (337)
T ss_dssp EEEETTTCCEE-EEEEEECSSCEEEEEECT-TSSEEEEE--ES-EEEEEETTT-TEEEEEEEC-SSCCCEEEECTTSCE-
T ss_pred EEEeCCCCCce-EeecCCCCCceeeEEECC-CCCEEEEe--CC-eEEEEECCC-CcCcceecC-CCceeeEEECCCCCE-
Confidence 89999987654 332233456788999999 88888888 56 699999987 666666654 356789999999998
Q ss_pred EEEEcCCCcEEEEEeecC
Q psy17688 288 ICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 288 l~~~~~d~~v~iwd~~~~ 305 (349)
|++++.++.|++||+.+.
T Consensus 294 l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEESBSSEEEEEETTTC
T ss_pred EEEEcCCCcEEEEECcCC
Confidence 777788999999999873
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=3.9e-21 Score=178.03 Aligned_cols=285 Identities=11% Similarity=0.044 Sum_probs=183.4
Q ss_pred eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecCCCCCCCcEEEEeC---
Q psy17688 25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPDRKGVFPDLLATSG--- 98 (349)
Q Consensus 25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~l~~~~--- 98 (349)
-.+++|+| ||++ ++ .+. ++.|++|++.. ++.... ...+.. .+.+++||||++ .|+.++
T Consensus 18 ~~~~~~s~--dg~~-~~-~~~----d~~i~~~~~~~--g~~~~~-~~~~~~~~~~~~~~~~SpDg~-----~la~~~~~~ 81 (719)
T 1z68_A 18 TFFPNWIS--GQEY-LH-QSA----DNNIVLYNIET--GQSYTI-LSNRTMKSVNASNYGLSPDRQ-----FVYLESDYS 81 (719)
T ss_dssp CCCCEESS--SSEE-EE-ECT----TSCEEEEESSS--CCEEEE-ECHHHHHTTTCSEEEECTTSS-----EEEEEEEEE
T ss_pred CCccEECC--CCeE-EE-EcC----CCCEEEEEcCC--CcEEEE-EccccccccceeeEEECCCCC-----eEEEEecCc
Confidence 34789999 9974 44 444 88999998863 333221 112222 489999999998 666543
Q ss_pred -------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 99 -------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 99 -------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
+ .|++||+.+++......+ ...+..++||| +++.|+.+. ++.|++||+.+++...... .+
T Consensus 82 ~~~~~s~~~~i~~~d~~~g~~~~~~~l--------~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~--~~ 149 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSNGEFVRGNEL--------PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITF--NG 149 (719)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCC--------CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCC--CC
T ss_pred eeEEeecceEEEEEECCCCccccceec--------CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEec--CC
Confidence 4 899999988653100111 13577899998 999999886 7899999998877642110 00
Q ss_pred ceeeeeeccCCc---------eeeEEEecCCCCccEEEEEcCCC----------------------------------cE
Q psy17688 171 HVKTQLIAHDKE---------VYDIAFSRAGGGRDMFASVGAEG----------------------------------SV 207 (349)
Q Consensus 171 ~~~~~~~~~~~~---------v~~~~~~~~~~~~~~l~~~~~d~----------------------------------~v 207 (349)
.....+.++... ..+++|+|++ +.|++++.|. .|
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNG---KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTS---SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCC---CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 000112233222 2589999999 7898887552 78
Q ss_pred EEEECCCCCce--eeee----eCCCCCceeEEEEeCCCCCeEEEEeeCC---cEEEEEe----ccCCCcceeEe----ec
Q psy17688 208 RMFDLRHLEHS--TIIY----EDPQHTPLLRLAWNKQDPNYLAMVAMNA---CEVIILD----VRVPCTPVARL----NN 270 (349)
Q Consensus 208 ~iwd~~~~~~~--~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~i~v~d----~~~~~~~~~~~----~~ 270 (349)
++||+.+++.. ..+. ...+...+..++|+| +++++++....+ ..|.+|| ..+ ++....+ ..
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~ 304 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEES 304 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEEC
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEeccccc
Confidence 89999886532 1111 013556789999999 777777654322 1488889 654 4444444 46
Q ss_pred CCcceE-----EEEEeeCCCCEEE-EEcCCCc--EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC-
Q psy17688 271 HRACVN-----GIAWAPHSSCHIC-TAGDDHQ--ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN- 341 (349)
Q Consensus 271 ~~~~v~-----~~~~~p~~~~~l~-~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 341 (349)
|...+. .+.|+|+|+.+++ +...+|. |.+||+.... ...+..+...+..+.+. ++..++..+.+
T Consensus 305 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 305 RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN------AIQITSGKWEAINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT------CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc------eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence 677776 8899999997333 3445664 5566665422 23444545567787777 78778777765
Q ss_pred ----CeEEEeeC
Q psy17688 342 ----KYLEVLRV 349 (349)
Q Consensus 342 ----~~v~vw~v 349 (349)
+..++|++
T Consensus 378 ~~~~~~~~l~~~ 389 (719)
T 1z68_A 378 EEYPGRRNIYRI 389 (719)
T ss_dssp GGCTTCBEEEEE
T ss_pred CCCCceEEEEEE
Confidence 77888863
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=6.2e-21 Score=172.41 Aligned_cols=232 Identities=8% Similarity=0.038 Sum_probs=163.1
Q ss_pred CCCeeEEEEecCCCCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---
Q psy17688 74 PYPTTKIMWIPDRKGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--- 147 (349)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--- 147 (349)
..+|++++|+|||+ .||.++ + +++||+++.++. .. +..+. ...+..+.|+| + +++++++.
T Consensus 21 ~~~~~~~~~~~DG~-----~la~~s~~~g~~~lw~~~~g~~--~~-lt~~~----~~~~~~~~~sp-d-~~l~~~~~~~g 86 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD-----KLLVVGFSEGSVNAYLYDGGET--VK-LNREP----INSVLDPHYGV-G-RVILVRDVSKG 86 (582)
T ss_dssp HSCEEEEEEEETTT-----EEEEEEEETTEEEEEEEETTEE--EE-CCSSC----CSEECEECTTC-S-EEEEEEECSTT
T ss_pred ccchheeecCCCCC-----eEEEEEccCCceeEEEEcCCCc--Ee-eeccc----ccccccccCCC-C-eEEEEeccCCC
Confidence 45799999999998 777655 5 999999865431 22 22211 14688899998 6 77777775
Q ss_pred CCeEEEEeccC--cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688 148 DTTCTIWCLET--NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP 225 (349)
Q Consensus 148 dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 225 (349)
+....+|.+.. .... ..+... ..+...+|+|+++ ..+++.+.++.+.+||+.+++........
T Consensus 87 ~~~~~l~~~~~~~~g~~-----------~~l~~~-~~~~~~~~s~dg~--~~~~~s~~~~~~~l~d~~~g~~~~l~~~~- 151 (582)
T 3o4h_A 87 AEQHALFKVNTSRPGEE-----------QRLEAV-KPMRILSGVDTGE--AVVFTGATEDRVALYALDGGGLRELARLP- 151 (582)
T ss_dssp SCCEEEEEEETTSTTCC-----------EECTTS-CSBEEEEEEECSS--CEEEEEECSSCEEEEEEETTEEEEEEEES-
T ss_pred CcceEEEEEeccCCCcc-----------ccccCC-CCceeeeeCCCCC--eEEEEecCCCCceEEEccCCcEEEeecCC-
Confidence 45566765543 2221 111111 2344668888873 34444444455569999987654443221
Q ss_pred CCCceeEEEEeCCCCCeEEEEeeC----CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--cEEE
Q psy17688 226 QHTPLLRLAWNKQDPNYLAMVAMN----ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--QALI 299 (349)
Q Consensus 226 ~~~~v~~~~~~~~~~~~l~~~~~d----~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--~v~i 299 (349)
. .+++|+| ++++|++++.+ . .|++||+.+ ++ ...+..|.+.+..++|+|||+. |+++..++ .|++
T Consensus 152 --~--~~~~~sp-DG~~la~~~~~~~~~~-~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 152 --G--FGFVSDI-RGDLIAGLGFFGGGRV-SLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKV-TAGLETAREARLVT 222 (582)
T ss_dssp --S--CEEEEEE-ETTEEEEEEEEETTEE-EEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCE-EEEEECSSCEEEEE
T ss_pred --C--ceEEECC-CCCEEEEEEEcCCCCe-EEEEEcCCC-CC-ceEeecCCCccccceECCCCCE-EEEccCCCeeEEEE
Confidence 2 8899999 99999988776 6 699999875 44 4567788889999999999998 77888888 8999
Q ss_pred EEeecCCCCCCCcEEEEeccCCceEEEE--------EcCCCCceEEEEcCCeEEEeeC
Q psy17688 300 WDIQQMPRAIEDPILAYTAAGGEINQIQ--------WGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~v~vw~v 349 (349)
||+.+. ... .+..|...+..++ |+|+|..+++++.++.+++|++
T Consensus 223 ~d~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDG-----SVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTTC-----CEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EcCCCC-----cEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 999873 233 5566677777777 9999966667778999999975
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=9.6e-20 Score=156.23 Aligned_cols=277 Identities=9% Similarity=-0.010 Sum_probs=171.8
Q ss_pred EEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEE
Q psy17688 28 MNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWR 105 (349)
Q Consensus 28 ~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~ 105 (349)
.+||| ||++ ||+++. .+|...||.++..+++.... ...+...+..+.|+|+++ .|+.++ + .|.+||
T Consensus 41 ~~~Sp--Dg~~-l~~~~~---~~g~~~l~~~d~~~g~~~~l-t~~~~~~~~~~~~spdg~-----~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 41 KCFTR--DGSK-LLFGGA---FDGPWNYYLLDLNTQVATQL-TEGRGDNTFGGFLSPDDD-----ALFYVKDGRNLMRVD 108 (388)
T ss_dssp CCBCT--TSCE-EEEEEC---TTSSCEEEEEETTTCEEEEC-CCSSCBCSSSCEECTTSS-----EEEEEETTTEEEEEE
T ss_pred ccCCC--CCCE-EEEEEc---CCCCceEEEEeCCCCceEEe-eeCCCCCccceEEcCCCC-----EEEEEeCCCeEEEEE
Confidence 78998 9996 777654 14543344334445554433 224444555778999998 666666 5 999999
Q ss_pred CCCCCchhheeccCCCCCCCcCceeEEE--ecCCCCCeEEEE----------------------EcCCeEEEEeccCcce
Q psy17688 106 AGEPETRLECILNNNKNSDFCAPLTSFD--WNEVDPNLLGTS----------------------SIDTTCTIWCLETNQV 161 (349)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~----------------------~~dg~i~iwd~~~~~~ 161 (349)
+.+++... +...+. ..+.... ++| ++..++.. ..+..|.+||+.+++.
T Consensus 109 ~~~g~~~~--~~~~~~-----~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 109 LATLEENV--VYQVPA-----EWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TTTCCEEE--EEECCT-----TEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CCCCccee--eeechh-----hcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 99875322 222221 2232233 366 77777642 2346799999998865
Q ss_pred eeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688 162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 234 (349)
. .+..+...+..++|+| ++ +.|+.+..+ ..|.++|+...+..... .......+..++
T Consensus 181 ~------------~l~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~ 244 (388)
T 3pe7_A 181 T------------VILQENQWLGHPIYRPYDD---STVAFCHEGPHDLVDARMWLINEDGTNMRKVK-THAEGESCTHEF 244 (388)
T ss_dssp E------------EEEEESSCEEEEEEETTEE---EEEEEEECSCTTTSSCSEEEEETTSCCCEESC-CCCTTEEEEEEE
T ss_pred E------------EeecCCccccccEECCCCC---CEEEEEEecCCCCCcceEEEEeCCCCceEEee-eCCCCcccccce
Confidence 4 3445666789999999 88 777776653 37888888765433222 111113578899
Q ss_pred EeCCCCCeEEEEee-CCc---EEEEEeccCCCc--ceeEeecCCcc---eEEEEEeeCCCCEEEEE--------cCCCcE
Q psy17688 235 WNKQDPNYLAMVAM-NAC---EVIILDVRVPCT--PVARLNNHRAC---VNGIAWAPHSSCHICTA--------GDDHQA 297 (349)
Q Consensus 235 ~~~~~~~~l~~~~~-d~~---~i~v~d~~~~~~--~~~~~~~~~~~---v~~~~~~p~~~~~l~~~--------~~d~~v 297 (349)
|+| +++.|+..+. ++. .|++||+.+ ++ .+..+..+... ...+.|+|+|+.++++. ..+..|
T Consensus 245 ~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 245 WVP-DGSALVYVSYLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp ECT-TSSCEEEEEEETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ECC-CCCEEEEEecCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 999 7776655443 331 399999986 43 22233221110 12237999999834332 456789
Q ss_pred EEEEeecCCCCCCCcEEEEeccCC-----------ceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688 298 LIWDIQQMPRAIEDPILAYTAAGG-----------EINQIQWGATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 298 ~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~v~vw~ 348 (349)
++||+.... +..+..+.. .+.+++|+|+|+.|+.++. ++...+|.
T Consensus 323 ~~~d~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 323 YVFNMKNGT------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp EEEETTTTE------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEEeccCCc------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 999998732 234444444 5788999999998887665 57777775
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=4.7e-19 Score=164.11 Aligned_cols=299 Identities=12% Similarity=0.096 Sum_probs=186.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG 98 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~ 98 (349)
.+.+++||| ||++ ||+++..+ ..++.|++|+++. ++...... ....+..++||||++ .||.+.
T Consensus 61 ~~~~~~~Sp--Dg~~-la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~--l~~~~~~~~~SPDG~-----~la~~~ 128 (719)
T 1z68_A 61 NASNYGLSP--DRQF-VYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNE--LPRPIQYLCWSPVGS-----KLAYVY 128 (719)
T ss_dssp TCSEEEECT--TSSE-EEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSC--CCSSBCCEEECSSTT-----CEEEEE
T ss_pred ceeeEEECC--CCCe-EEEEecCceeEEeecceEEEEEECCC--Ccccccee--cCcccccceECCCCC-----EEEEEE
Confidence 388999999 9996 88776421 1157899998763 33311011 135689999999999 777777
Q ss_pred C-cEEEEECCCCCchhheeccCCCCC---CCc---------CceeEEEecCCCCCeEEEEEcCC----------------
Q psy17688 99 D-YLRVWRAGEPETRLECILNNNKNS---DFC---------APLTSFDWNEVDPNLLGTSSIDT---------------- 149 (349)
Q Consensus 99 ~-~i~vw~~~~~~~~~~~~~~~~~~~---~~~---------~~i~~~~~~~~~~~~l~~~~~dg---------------- 149 (349)
+ .|++|++.+++.. .....++... ++. ....+++|+| +++.|++++.|.
T Consensus 129 ~~~i~~~~~~~g~~~-~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 129 QNNIYLKQRPGDPPF-QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp TTEEEEESSTTSCCE-ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred CCeEEEEeCCCCCcE-EEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 6 9999999876431 1111111100 000 1125799998 999999988652
Q ss_pred ------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcE
Q psy17688 150 ------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSV 207 (349)
Q Consensus 150 ------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v 207 (349)
.|++||+.+++....+.. .....+.+|...+..++|+|++ +++++.... ..|
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~SpD~---~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV---PVPAMIASSDYYFSWLTWVTDE---RVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC---CCCHHHHTSCEEEEEEEESSSS---EEEEEEEESSTTEEEE
T ss_pred ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc---cCCccCCCCcceEEEeEEeCCC---eEEEEEeccccCeEEE
Confidence 788999988764200000 0001234677889999999997 777774432 248
Q ss_pred EEEE----CCCCCceeeee--eCCCCCcee-----EEEEeCCCCCeEEE--EeeCCc-EEEEEeccCCCcceeEeecCCc
Q psy17688 208 RMFD----LRHLEHSTIIY--EDPQHTPLL-----RLAWNKQDPNYLAM--VAMNAC-EVIILDVRVPCTPVARLNNHRA 273 (349)
Q Consensus 208 ~iwd----~~~~~~~~~~~--~~~~~~~v~-----~~~~~~~~~~~l~~--~~~d~~-~i~v~d~~~~~~~~~~~~~~~~ 273 (349)
.+|| +.+++...... ...+...+. .++|+| +++.++. ...++. .|.+||+.. ++ ...+..+..
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~ 357 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKW 357 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSS
T ss_pred EEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCce
Confidence 8899 77665443331 013445555 789999 7775544 334442 466677764 33 556666666
Q ss_pred ceEEEEEeeCCCCEEEEEcC----CCcEEEEEeecCCCCCCCcEEEEe----ccCCceEEEEEcCCCCceEEEEcC---C
Q psy17688 274 CVNGIAWAPHSSCHICTAGD----DHQALIWDIQQMPRAIEDPILAYT----AAGGEINQIQWGATQPDWIAICYN---K 342 (349)
Q Consensus 274 ~v~~~~~~p~~~~~l~~~~~----d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d---~ 342 (349)
.+..+.++ +++.+++++.. ++..++|.+...... .+ ...+. +|...+..+.|+|+++.++..+.+ .
T Consensus 358 ~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~-~~-~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p 434 (719)
T 1z68_A 358 EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYP-PS-KKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP 434 (719)
T ss_dssp CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSS-CC-EEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC
T ss_pred EEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCC-CC-ceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC
Confidence 78888888 88875556554 588999988752110 00 12222 145678889999999887765432 3
Q ss_pred eEEEee
Q psy17688 343 YLEVLR 348 (349)
Q Consensus 343 ~v~vw~ 348 (349)
.+.+|+
T Consensus 435 ~~~l~d 440 (719)
T 1z68_A 435 ISTLHD 440 (719)
T ss_dssp EEEEEC
T ss_pred eEEEEE
Confidence 556664
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=2.7e-18 Score=145.96 Aligned_cols=253 Identities=9% Similarity=-0.001 Sum_probs=163.0
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS----- 97 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~----- 97 (349)
..+..++|+| ||++ |++++. + .|.+|+++. ++++.........+.+.+++|+|+++.. +++++
T Consensus 40 ~~~~~~a~sp--dg~~-l~~~~~----~-~v~~~~~~~-~g~~~~~~~~~~~g~~~~~~~spdg~~l---~~~~~~~~~~ 107 (365)
T 1jof_A 40 EPISWMTFDH--ERKN-IYGAAM----K-KWSSFAVKS-PTEIVHEASHPIGGHPRANDADTNTRAI---FLLAAKQPPY 107 (365)
T ss_dssp CCCSEEEECT--TSSE-EEEEEB----T-EEEEEEEEE-TTEEEEEEEEECCSSGGGGCTTSCCEEE---EEEECSSTTC
T ss_pred CCCcEEEECC--CCCE-EEEEcc----c-eEEEEEECC-CCCEEEeeEeecCCCCccEEECCCCCEE---EEEEecCCcc
Confidence 3678899998 9995 887776 5 899999863 3444322221111346678999999721 23343
Q ss_pred ---------CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEecc-Ccceeeee
Q psy17688 98 ---------GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLE-TNQVVGRV 165 (349)
Q Consensus 98 ---------~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~~~ 165 (349)
.+ .+.+|++...... ...+.... ......+.+++|+| ++++++++.. ++.|.+||+. +++...
T Consensus 108 ~~~~~~~~~~~g~v~v~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~-- 182 (365)
T 1jof_A 108 AVYANPFYKFAGYGNVFSVSETGKL-EKNVQNYE-YQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVEL-- 182 (365)
T ss_dssp CEEEEEESSSCCEEEEEEECTTCCE-EEEEEEEE-CCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEE--
T ss_pred eeccceeecCCceEEEEccCCCCcC-cceEeeEE-eCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEE--
Confidence 34 8999999743211 11111100 01225688999998 8888887764 6799999998 665431
Q ss_pred cccCCceeeeee--ccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECC--CCCce---eeeeeCCC-----CC----
Q psy17688 166 NSVSGHVKTQLI--AHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLR--HLEHS---TIIYEDPQ-----HT---- 228 (349)
Q Consensus 166 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~--~~~~~---~~~~~~~~-----~~---- 228 (349)
...+. .|...+..++|+|++ +++++++ .++.|.+|++. +++.. ..+..... ..
T Consensus 183 -------~~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 183 -------VGSVDAPDPGDHPRWVAMHPTG---NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp -------EEEEECSSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred -------eeeEecCCCCCCCCEeEECCCC---CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence 01222 235668999999999 6776665 57899999875 34321 11211111 11
Q ss_pred --ceeEEE-EeCCCCCeEEEEeeCCc-----EEEEEeccCCCccee---EeecCCcceEEEEEee---CCCCEEEEEcC-
Q psy17688 229 --PLLRLA-WNKQDPNYLAMVAMNAC-----EVIILDVRVPCTPVA---RLNNHRACVNGIAWAP---HSSCHICTAGD- 293 (349)
Q Consensus 229 --~v~~~~-~~~~~~~~l~~~~~d~~-----~i~v~d~~~~~~~~~---~~~~~~~~v~~~~~~p---~~~~~l~~~~~- 293 (349)
.+..++ |+| ++++|+++..+.. .|.+|++...++... ....+...+..++|+| +|++ |++++.
T Consensus 253 ~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~ 330 (365)
T 1jof_A 253 GLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQ 330 (365)
T ss_dssp BSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSS
T ss_pred ccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcC
Confidence 478999 999 8888887765432 499999963244332 2333455677899999 8998 777765
Q ss_pred CCcEEEEEeec
Q psy17688 294 DHQALIWDIQQ 304 (349)
Q Consensus 294 d~~v~iwd~~~ 304 (349)
++.|.+|++..
T Consensus 331 ~~~v~v~~~~~ 341 (365)
T 1jof_A 331 EGWLEIYRWKD 341 (365)
T ss_dssp SCEEEEEEEET
T ss_pred CCeEEEEEEch
Confidence 58999999986
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.1e-18 Score=161.76 Aligned_cols=246 Identities=12% Similarity=0.172 Sum_probs=166.7
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------ 148 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------ 148 (349)
.....+.|+|++. +++++.+.|++|++.+++. ..++..+....+.....++.||| +++.|+.++.+
T Consensus 17 ~~~~~~~w~~dg~-----~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHE-----YLYKQENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSE-----EEEEETTEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSS
T ss_pred ccccccEECCCCc-----EEEEcCCcEEEEECCCCce--EEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEE
Confidence 3467899999997 8888733999999998763 33455554433333445689998 99999998876
Q ss_pred ---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688 149 ---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP 225 (349)
Q Consensus 149 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 225 (349)
+.+.+||+.+++.. .+..|...+...+|||++ +.||.+ .++.|++||+.+++....... .
T Consensus 89 ~~~~~~~~~d~~~~~~~------------~l~~~~~~~~~~~~SPdG---~~la~~-~~~~i~~~~~~~~~~~~lt~~-g 151 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI------------TEERIPNNTQWVTWSPVG---HKLAYV-WNNDIYVKIEPNLPSYRITWT-G 151 (740)
T ss_dssp CEEEEEEEEETTTTEEC------------CSSCCCTTEEEEEECSST---TCEEEE-ETTEEEEESSTTSCCEECCSC-C
T ss_pred ccceEEEEEECCCCcEE------------EcccCCCcceeeEECCCC---CEEEEE-ECCeEEEEECCCCceEEEcCC-C
Confidence 56779999998764 355677789999999999 788887 468999999988764433221 1
Q ss_pred CCC-----------------ceeEEEEeCCCCCeEEEEeeCCc-----------------------------------EE
Q psy17688 226 QHT-----------------PLLRLAWNKQDPNYLAMVAMNAC-----------------------------------EV 253 (349)
Q Consensus 226 ~~~-----------------~v~~~~~~~~~~~~l~~~~~d~~-----------------------------------~i 253 (349)
... ....+.||| +++.||.++.|.. .|
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l 230 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence 111 123589999 9999988764431 36
Q ss_pred EEEeccC---CCc-ceeEee------cCCcceEEEEEeeCCCCEEEEEc----CCCcEEEEEeecCC----CCCCCcEEE
Q psy17688 254 IILDVRV---PCT-PVARLN------NHRACVNGIAWAPHSSCHICTAG----DDHQALIWDIQQMP----RAIEDPILA 315 (349)
Q Consensus 254 ~v~d~~~---~~~-~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~----~d~~v~iwd~~~~~----~~~~~~~~~ 315 (349)
++||+.+ ... ....+. +|...+..++|+|||+. ++... .+..|++||+.+++ ......+ .
T Consensus 231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l-~ 308 (740)
T 4a5s_A 231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH-I 308 (740)
T ss_dssp EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE-E
T ss_pred EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEEEEEECCCCccccceeEEEEe-e
Confidence 7788764 211 223333 37778999999999996 44432 23479999998864 1111111 1
Q ss_pred EeccCCceE-----EEEEcCCCCceE-EEEc-CC--eEEEee
Q psy17688 316 YTAAGGEIN-----QIQWGATQPDWI-AICY-NK--YLEVLR 348 (349)
Q Consensus 316 ~~~~~~~v~-----~~~~~~~~~~l~-~~~~-d~--~v~vw~ 348 (349)
-..|...|. ...|+|||+.++ ..+. +| .|.+|+
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 234455544 789999999776 5554 44 455554
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=2.8e-18 Score=159.19 Aligned_cols=276 Identities=10% Similarity=0.049 Sum_probs=167.5
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC-----CeeEEEEecCCCCCCCcEEEEeC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY-----PTTKIMWIPDRKGVFPDLLATSG 98 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~l~~~~ 98 (349)
...+++|+| ||++ |+++ ++.|.+|++... +.... ...|.. ....+.||||++ .|+.++
T Consensus 18 ~~~~~~w~~--dg~~-~~~~------~~~i~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Spdg~-----~l~~~~ 80 (740)
T 4a5s_A 18 KLYSLRWIS--DHEY-LYKQ------ENNILVFNAEYG--NSSVF-LENSTFDEFGHSINDYSISPDGQ-----FILLEY 80 (740)
T ss_dssp CCCCEEECS--SSEE-EEEE------TTEEEEEETTTC--CEEEE-ECTTTTTTCCSCCCEEEECTTSS-----EEEEEE
T ss_pred cccccEECC--CCcE-EEEc------CCcEEEEECCCC--ceEEE-EechhhhhhcccccceEECCCCC-----EEEEEE
Confidence 467899999 9985 7775 789999988644 32211 223332 234588999998 666655
Q ss_pred C-----------cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 99 D-----------YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 99 ~-----------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
+ .+.+||+.+++.. .+..+ ...+...+||| +++.||.+. ++.|++|++.+++..+..
T Consensus 81 ~~~~~~r~~~~~~~~~~d~~~~~~~---~l~~~-----~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt-- 148 (740)
T 4a5s_A 81 NYVKQWRHSYTASYDIYDLNKRQLI---TEERI-----PNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRIT-- 148 (740)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEEC---CSSCC-----CTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECC--
T ss_pred CCeeeEEEccceEEEEEECCCCcEE---EcccC-----CCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEc--
Confidence 2 3469999887522 12222 25688999998 999998884 689999999887754210
Q ss_pred cCCceeeeeeccC---------CceeeEEEecCCCCccEEEEEcCCC---------------------------------
Q psy17688 168 VSGHVKTQLIAHD---------KEVYDIAFSRAGGGRDMFASVGAEG--------------------------------- 205 (349)
Q Consensus 168 ~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~l~~~~~d~--------------------------------- 205 (349)
..+.....+.++. +....+.|+|++ +.|+.++.|.
T Consensus 149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg---~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG---TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS---SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred CCCCccceecCcccccccchhcCCCcceEECCCC---CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 0011111222222 222458999999 7888765321
Q ss_pred ---cEEEEECCC---CCc--eeeeeeC----CCCCceeEEEEeCCCCCeEEEEeeCC---cEEEEEeccCCCc------c
Q psy17688 206 ---SVRMFDLRH---LEH--STIIYED----PQHTPLLRLAWNKQDPNYLAMVAMNA---CEVIILDVRVPCT------P 264 (349)
Q Consensus 206 ---~v~iwd~~~---~~~--~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~------~ 264 (349)
.|++||+.+ ++. ...+... .+...+..++|+| +++.++.....+ ..|.+||+.+ ++ .
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~ 303 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDE-SSGRWNCLV 303 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEET-TTTEEEECG
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCC-CccccceeE
Confidence 478899887 632 1112110 1556689999999 788666554322 1599999987 44 1
Q ss_pred eeEe--ecCCcceE-----EEEEeeCCCCEEEEEc-CCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688 265 VARL--NNHRACVN-----GIAWAPHSSCHICTAG-DDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD 334 (349)
Q Consensus 265 ~~~~--~~~~~~v~-----~~~~~p~~~~~l~~~~-~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 334 (349)
+..+ ..|...|. .+.|+|||+.+++..+ .+| .|++||+.... + ..+......+..+.+ +++..
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~-----~-~~lT~g~~~v~~~~~-~d~~~ 376 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD-----C-TFITKGTWEVIGIEA-LTSDY 376 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS-----C-EESCCSSSCEEEEEE-ECSSE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc-----e-EecccCCEEEEEEEE-EeCCE
Confidence 2222 44665554 7899999998442454 444 47777776532 1 223322444555432 33555
Q ss_pred eEEEEc
Q psy17688 335 WIAICY 340 (349)
Q Consensus 335 l~~~~~ 340 (349)
++..+.
T Consensus 377 i~f~~~ 382 (740)
T 4a5s_A 377 LYYISN 382 (740)
T ss_dssp EEEEES
T ss_pred EEEEEe
Confidence 555544
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=1.2e-18 Score=149.66 Aligned_cols=274 Identities=8% Similarity=-0.000 Sum_probs=169.0
Q ss_pred eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCC-eeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688 25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYP-TTKIMWIPDRKGVFPDLLATSG-D-YL 101 (349)
Q Consensus 25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~l~~~~-~-~i 101 (349)
+..++||| ||++ ||..... +++..|.+|+++ +++.... ..+... ...+.|+|+++ .|+..+ + .|
T Consensus 38 ~~~~~~Sp--dG~~-l~~~~~~-~g~~~l~~~d~~--~~~~~~l--~~~~~~~~~~~~~spdg~-----~l~~~~~~~~l 104 (396)
T 3c5m_A 38 FYQKCFTQ--DGKK-LLFAGDF-DGNRNYYLLNLE--TQQAVQL--TEGKGDNTFGGFISTDER-----AFFYVKNELNL 104 (396)
T ss_dssp TTSCCBCT--TSCE-EEEEECT-TSSCEEEEEETT--TTEEEEC--CCSSCBCTTTCEECTTSS-----EEEEEETTTEE
T ss_pred eecCcCCC--CCCE-EEEEEec-CCCceEEEEECC--CCcEEEe--ecCCCCccccceECCCCC-----EEEEEEcCCcE
Confidence 67889998 9996 7766541 123456666654 4443222 122233 33478999998 666555 4 89
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeE-------------------EEecCCCCCeEEEE-----EcCCeEEEEecc
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTS-------------------FDWNEVDPNLLGTS-----SIDTTCTIWCLE 157 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~l~~~-----~~dg~i~iwd~~ 157 (349)
.+|++.+++.. .+...+.. .... ..|+| +++.++.+ ..+..|.+||+.
T Consensus 105 ~~~d~~~~~~~--~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 105 MKVDLETLEEQ--VIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp EEEETTTCCEE--EEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCCcE--EEEecccc-----cCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECC
Confidence 99999876522 22221111 1111 34566 66665544 356689999998
Q ss_pred CcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCce
Q psy17688 158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPL 230 (349)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v 230 (349)
+++.. .+..+...+..+.|+| ++ ..|+..+.+ ..|.+||+..++..... .......+
T Consensus 177 ~g~~~------------~~~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~ 240 (396)
T 3c5m_A 177 TGELE------------VIHQDTAWLGHPIYRPFDD---STVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-EHAEGESC 240 (396)
T ss_dssp TCCEE------------EEEEESSCEEEEEEETTEE---EEEEEEECSCSSSCSCCCEEEETTSCCCEESS-CCCTTEEE
T ss_pred CCcEE------------eeccCCcccccceECCCCC---CEEEEEecCCCCCCCceEEEEECCCCceeEee-ccCCCccc
Confidence 87654 2334566789999999 67 666665543 46888998765433222 11113357
Q ss_pred eEEEEeCCCCCeEEEEeeC-----CcEEEEEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEc------------
Q psy17688 231 LRLAWNKQDPNYLAMVAMN-----ACEVIILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAG------------ 292 (349)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~d-----~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~------------ 292 (349)
..++|+| +++.|+..+.+ + .|++||+.+ ++... +..... .. +.|+| +|+. +++++
T Consensus 241 ~~~~~sp-dg~~l~~~~~~~~~~~~-~l~~~d~~~-g~~~~-l~~~~~-~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 241 THEFWIP-DGSAMAYVSYFKGQTDR-VIYKANPET-LENEE-VMVMPP-CS-HLMSNFDGSL-MVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEECT-TSSCEEEEEEETTTCCE-EEEEECTTT-CCEEE-EEECCS-EE-EEEECSSSSE-EEEEECCC---------
T ss_pred cceEECC-CCCEEEEEecCCCCccc-eEEEEECCC-CCeEE-eeeCCC-CC-CCccCCCCce-EEEecCCcceeeccccc
Confidence 8899999 88877766544 3 499999976 43322 221222 23 89999 9997 66543
Q ss_pred ----CCCcEEEEEeecCCCCCCCcEEEEeccCC-----------ceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688 293 ----DDHQALIWDIQQMPRAIEDPILAYTAAGG-----------EINQIQWGATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 293 ----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~v~vw~ 348 (349)
.+..|++||+..... ..+..+.. .+..++|+|+++.|+.++. ++...+|.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSA------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp -CCCCCCEEEEEETTTTBC------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cccCCCCcEEEEecccCce------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 346899999876432 22333333 2567899999998877765 46666664
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=2.2e-16 Score=129.46 Aligned_cols=242 Identities=7% Similarity=-0.001 Sum_probs=165.8
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT 149 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg 149 (349)
+-..+.++++++++. ++++.. + .|.+|+.+... ............+...+.++++.+.++.++++... ++
T Consensus 28 ~~~~p~~v~~~~~g~-----l~v~~~~~~~i~~~d~~g~~--~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 28 QFTEPSGVAVNAQND-----IIVADTNNHRIQIFDKEGRF--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp CBSCEEEEEECTTCC-----EEEEEGGGTEEEEECTTSCE--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred ccCCCceEEECCCCC-----EEEEECCCCEEEEECCCCcE--EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 345689999999987 777765 4 99999976321 11111111112233467889995336666666543 78
Q ss_pred eEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
.|.+|| .+++.. ..+. .+...+.+++++|++ +++++...++.|.+||... +....+.......
T Consensus 101 ~i~~~d-~~g~~~-----------~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 101 QIQIYN-QYGQFV-----------RKFGATILQHPRGVTVDNKG---RIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLE 164 (286)
T ss_dssp EEEEEC-TTSCEE-----------EEECTTTCSCEEEEEECTTS---CEEEEETTTTEEEEECTTS-CEEEEEECTTTCS
T ss_pred EEEEEC-CCCcEE-----------EEecCccCCCceEEEEeCCC---CEEEEECCCCEEEEEcCCC-CEEEEeCCCCccC
Confidence 999999 455554 2222 234568899999998 7888888889999999654 3333332223345
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCC-cEEEEEeecC
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDH-QALIWDIQQM 305 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~-~v~iwd~~~~ 305 (349)
.+..++++| +++++++...++ .|++||.. ++.+..+..+ ...+..++++|+|.. +++...++ .|.+||...
T Consensus 165 ~p~~i~~~~-~g~l~v~~~~~~-~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l-~v~~~~~~~~i~~~~~~g- 238 (286)
T 1q7f_A 165 FPNGVVVND-KQEIFISDNRAH-CVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEI-LIADNHNNFNLTIFTQDG- 238 (286)
T ss_dssp SEEEEEECS-SSEEEEEEGGGT-EEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCE-EEEECSSSCEEEEECTTS-
T ss_pred CcEEEEECC-CCCEEEEECCCC-EEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCE-EEEeCCCCEEEEEECCCC-
Confidence 689999999 788777777788 59999975 4555555433 357899999999976 77777775 999999543
Q ss_pred CCCCCCcEEEEeccC--CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 306 PRAIEDPILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 306 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
..+..+..+. ..+.+++++|++. +++++.+++|++|++
T Consensus 239 -----~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 239 -----QLISALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRY 278 (286)
T ss_dssp -----CEEEEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEEC
T ss_pred -----CEEEEEcccCCCCcceeEEECCCCc-EEEECCCCeEEEEEc
Confidence 2344454433 3478999999997 555578999999984
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=3.6e-17 Score=137.92 Aligned_cols=259 Identities=10% Similarity=-0.011 Sum_probs=151.4
Q ss_pred cceeeeeecCC--ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC-----CCCeeEEEEecC
Q psy17688 13 QKEIYKYEAPW--PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH-----PYPTTKIMWIPD 85 (349)
Q Consensus 13 ~~~~~~~~~~~--~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~ 85 (349)
.+.+..+..+. .+..++|+| ||++.++++.. ++.|.+|++. +++........+ ...+..++|+|+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~----~~~i~~~d~~--t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 31 DTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNH----YGDIYGIDLD--TCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp TEEEEEEECSSCCSSCEEEECT--TSSEEEEEETT----TTEEEEEETT--TTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred CcEEEEEecCCCCCCceeEECC--CCCEEEEEeCC----CCcEEEEeCC--CCcEEEEEEcccccccccccccceEECCC
Confidence 34455555555 688999998 99852344434 7899999875 344333222222 223789999999
Q ss_pred CCCCCCcEEEEeC--------------CcEEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688 86 RKGVFPDLLATSG--------------DYLRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150 (349)
Q Consensus 86 ~~~~~~~~l~~~~--------------~~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (349)
++ .+++++ +.|.+||+.+++.... ..... ...+.+++|+| +++ +++++ +.
T Consensus 103 g~-----~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~-dg~-l~~~~--~~ 167 (349)
T 1jmx_B 103 GK-----EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM------PRQVYLMRAAD-DGS-LYVAG--PD 167 (349)
T ss_dssp SS-----EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC------CSSCCCEEECT-TSC-EEEES--SS
T ss_pred CC-----EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC------CCcccceeECC-CCc-EEEcc--Cc
Confidence 98 666655 4999999986431111 11111 13577899998 777 55554 34
Q ss_pred EEEEeccCcceeeeecccCC-ce-------eeeee-ccC----CceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCC
Q psy17688 151 CTIWCLETNQVVGRVNSVSG-HV-------KTQLI-AHD----KEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLE 216 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~-~~-------~~~~~-~~~----~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~ 216 (349)
|.+||+.+++....+..... .. ...+. ... .....+++++++. ...... ....+..+|..+++
T Consensus 168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK---QDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----------CCCEEEEEEEEEETTTCC
T ss_pred EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc---CCccccccceeEEEEeccCCc
Confidence 99999998887643211000 00 00000 000 0233455554331 100000 00112224444433
Q ss_pred ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688 217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296 (349)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~ 296 (349)
...... ......+..++|+|.++++++++ ++ .|.+||+.+ ++.+..+.. ...+.+++|+|++++ |++++.++.
T Consensus 245 ~~~~~~-~~~~~~~~~~~~sp~dg~~l~~~--~~-~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~ 317 (349)
T 1jmx_B 245 THTQEF-ADLTELYFTGLRSPKDPNQIYGV--LN-RLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDK-LYLGGTFND 317 (349)
T ss_dssp EEEEEE-EECSSCEEEEEECSSCTTEEEEE--ES-EEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSC-EEEESBSSE
T ss_pred EEeccc-ccCCCcceeeEecCCCCCEEEEE--cC-eEEEEECcc-CeEEEEEcC-CCCccceEECCCCCE-EEEecCCCe
Confidence 211111 12445688999999566777777 66 699999987 666666653 345789999999998 677888999
Q ss_pred EEEEEeec
Q psy17688 297 ALIWDIQQ 304 (349)
Q Consensus 297 v~iwd~~~ 304 (349)
|++||+.+
T Consensus 318 v~v~d~~~ 325 (349)
T 1jmx_B 318 LAVFNPDT 325 (349)
T ss_dssp EEEEETTT
T ss_pred EEEEeccc
Confidence 99999987
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=3.4e-16 Score=132.53 Aligned_cols=280 Identities=13% Similarity=0.017 Sum_probs=176.4
Q ss_pred eeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec-----CCCCeeEEEEe
Q psy17688 15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID-----HPYPTTKIMWI 83 (349)
Q Consensus 15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~ 83 (349)
.+..+..+... .++|+| ||++ |.++... ++.++.|.+|+.. +++........ +......++++
T Consensus 43 ~~~~i~~g~~p-~i~~sp--dg~~-lyv~~~~~~~~~~g~~~~~v~v~d~~--t~~~~~~i~~~~~~~~~g~~p~~i~~s 116 (361)
T 2oiz_A 43 FLGMVPTAFNG-HVQVSN--DGKK-IYTMTTYHERITRGKRSDVVEVWDAD--KLTFEKEISLPPKRVQGLNYDGLFRQT 116 (361)
T ss_dssp EEEEEECCEEE-EEEECT--TSSE-EEEEEEEETTSSSSCEEEEEEEEETT--TCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred EEEEecCCCCC-ceEECC--CCCE-EEEEEecccccccCCCCCEEEEEECc--CCcEEEEEEcCccccccCCCcceEEEC
Confidence 34444444334 899998 9996 7766421 0125779999765 33433332221 23457889999
Q ss_pred cCCCCCCCcEEEEe--C-C-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688 84 PDRKGVFPDLLATS--G-D-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET 158 (349)
Q Consensus 84 ~~~~~~~~~~l~~~--~-~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 158 (349)
|+++ +|+++ + + .|.+||+.+.+.. .. +.. .....+.+.|.....+++.+.||.+.+|++..
T Consensus 117 pdg~-----~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~-------~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 117 TDGK-----FIVLQNASPATSIGIVDVAKGDYV--EDVTAA-------AGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp TTSS-----EEEEEEESSSEEEEEEETTTTEEE--EEEGGG-------TTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCCC-----EEEEECCCCCCeEEEEECCCCcEE--EEEecC-------CCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 9998 55544 2 4 8999999886421 11 111 11222445564457888999999999999865
Q ss_pred -cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCCC---------C
Q psy17688 159 -NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDPQ---------H 227 (349)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~---------~ 227 (349)
++...... ....+.....+ ..+.++|++ ..++..+.++.+.++|+......... ..... .
T Consensus 183 ~g~~~~~~~-----~~~~~~~~~~~-~~~~~~~~g---~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (361)
T 2oiz_A 183 DGKVASQSR-----SKQMFSVKDDP-IFIAPALDK---DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP 253 (361)
T ss_dssp TSSEEEEEE-----CCCCSCTTTSC-BCSCCEECS---SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred CCcEeeecc-----ccceEcCCCCc-eEEEecccC---CEEEEEeCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence 43321000 00011222222 233446766 56667778899999999765422111 00000 0
Q ss_pred CceeEEEEeCCCCCeEEEEee-----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAM-----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~-----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~ 296 (349)
.....++++| ++..++++.. .+ .|.+||+.+ .+.+.++..+. +..++|+|+|++ |++++. +.
T Consensus 254 ~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~-~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~-l~v~n~-~~ 326 (361)
T 2oiz_A 254 GGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAA-EIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNL-MLTLDG-GN 326 (361)
T ss_dssp CCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCS-EEEEEETTT-TEEEEEEECTT--CCEEEEETTTTE-EEEECS-SC
T ss_pred CCeeEEEEec-CCCeEEEEEccCCCcccccCCCc-eEEEEECCC-CcEEEEEecCC--eeEEEECCCCCE-EEEeCC-Ce
Confidence 1122378999 7777776654 34 699999998 88888888776 999999999997 777776 99
Q ss_pred EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688 297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP 333 (349)
Q Consensus 297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 333 (349)
|.+||..++.. +.+..+..+......++++|+|.
T Consensus 327 v~v~D~~t~~l---~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEP---KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSC---EEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEEECCCCcc---eeeEEeccCCCCcEEEEecCCCC
Confidence 99999988410 34555555577889999999985
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=6.7e-17 Score=148.28 Aligned_cols=285 Identities=8% Similarity=-0.008 Sum_probs=175.5
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCee---------EEEEe--cCCCCCC
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT---------KIMWI--PDRKGVF 90 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~~ 90 (349)
...+..++|++ ++-+ ++.+.. +.++...||.... .++... ...+...+. ...|+ ||++
T Consensus 23 ~~~~~~~~~s~--~~~~-~~~~~~--~~~~~~~l~~~~~-~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~SPDg~--- 91 (662)
T 3azo_A 23 SGRPACVGAVG--DEVW-WVAPRP--AEAGRATLVRRRA-DGAEES--ALPAPWNVRNRVFEYSGFPWAGVPRPAGG--- 91 (662)
T ss_dssp CSCCEEEEEET--TEEE-EEEEET--TTTTEEEEEEECT-TSCEEE--SSCTTCCBCCCGGGTCCCCEEEECCSSSS---
T ss_pred CCccceeEEcC--CeEE-EEecCc--ccCCcEEEEEECC-CCCcce--eCCCCccccccccccCCccceeeeecCCC---
Confidence 36788999996 5543 444421 2367889998632 233221 223445555 56676 9998
Q ss_pred CcE-EEEeCC---cEEEEECC--C-CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----------CeEEE
Q psy17688 91 PDL-LATSGD---YLRVWRAG--E-PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----------TTCTI 153 (349)
Q Consensus 91 ~~~-l~~~~~---~i~vw~~~--~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------g~i~i 153 (349)
. |+..++ .|.++++. . +. ...+.......+...+.+++|+| +++.|++++.+ ..|.+
T Consensus 92 --~~la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 92 --PLLVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp --CEEEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred --eEEEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEE
Confidence 6 776664 56666654 2 22 12222211111235678999998 99999988877 58999
Q ss_pred EeccC------cceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEcCC--------CcEEEEECC-CCC-
Q psy17688 154 WCLET------NQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVGAE--------GSVRMFDLR-HLE- 216 (349)
Q Consensus 154 wd~~~------~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~d--------~~v~iwd~~-~~~- 216 (349)
||+.+ ++.. .+. .+...+..++|+|++ +.|+.++.+ ..|++||+. +++
T Consensus 166 ~~~~~~~~~~~~~~~------------~l~~~~~~~~~~~~~SpDG---~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 166 VPLDGSAAADRSAVR------------ELSDDAHRFVTGPRLSPDG---RQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp EETTSTTTTCGGGSE------------ESSCSCSSEECCCEECTTS---SEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred EECCCCccccCCcee------------EEEecCCCcccCceECCCC---CEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 99987 4442 334 455678899999999 788877654 379999998 451
Q ss_pred -ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccCCCcceeEeecCCcc--------eEEEEEeeCCCC
Q psy17688 217 -HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRVPCTPVARLNNHRAC--------VNGIAWAPHSSC 286 (349)
Q Consensus 217 -~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~~~~~~~~~~~~~~~--------v~~~~~~p~~~~ 286 (349)
....+.. .+...+..++|+| ++++++++..++. .|.+||+.. ++.......+... +..++|+|++..
T Consensus 231 ~~~~~l~~-~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 231 ADTRTLLG-GPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEEEEE-ETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred cccEEeCC-CCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEE
Confidence 2222222 2357789999999 7888877777762 255555543 3332222222221 467889999887
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE-EEcCCCCceEEEEcCCeEEEe
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI-QWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~v~vw 347 (349)
+++++. +.++||.+.... ..+..+..|...+..+ +++.+.-.+++++.+....+|
T Consensus 308 -~~~~~~-~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 308 -AVVHGK-GAAVLGILDPES----GELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp -EEEEBS-SSCEEEEEETTT----TEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred -EEEEEc-CccEEEEEECCC----CcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 888888 999999665421 1245556666677766 554433222233445544555
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=6e-16 Score=129.50 Aligned_cols=262 Identities=7% Similarity=0.023 Sum_probs=171.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeec--------------------ccCCeEEEEeccccccccccceEecCCCCeeEEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVE--------------------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW 82 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~--------------------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (349)
..+.+++++| +|++ +++..... ..++.|.+|+.+ ++++.......+-..+..+++
T Consensus 24 ~~v~~va~d~--~G~l-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 24 GQVSGVALDS--KNNL-VIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN--NAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp SCEEEEEECT--TCCE-EEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT--TCCEEEEECTTTCSSEEEEEE
T ss_pred CCceEEEECC--CCCE-EEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC--CCeEEeccCCCccCCceEEEE
Confidence 5689999998 9984 65554400 001468888653 455543222234457899999
Q ss_pred ecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheecc---CCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEec
Q psy17688 83 IPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILN---NNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCL 156 (349)
Q Consensus 83 ~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~ 156 (349)
+|+++ ++++.. + .|++|+.+.........-. ......+......++++|.++.++++.+ .++.|++||
T Consensus 99 d~~g~-----l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 99 DTDGN-----YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp CTTSC-----EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred CCCCC-----EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 99998 888776 4 9999998654211111111 0001122246788999975677777775 689999999
Q ss_pred cCcceeeeecccCCceeeeeeccCCceeeEEEecC-CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEE
Q psy17688 157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA-GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW 235 (349)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 235 (349)
.+++....+...... .....++......++++|+ + .++++...++.|++||..+++....+........+..++|
T Consensus 173 ~~g~~~~~~~~~g~~-~~~~~~~~~~p~gia~d~~~g---~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 173 PSGKFVTQWGEESSG-SSPRPGQFSVPHSLALVPHLD---QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp TTSCEEEEECEECCS-SSCCTTEESCEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred CCCCEEEEeccCCCC-CCCCCcccCCCcEEEEECCCC---EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeee
Confidence 455554221100000 0000112234789999998 6 7888888999999999997766655544445567889999
Q ss_pred eCCCCCeEEEE-------eeCCcEEEEEeccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 236 NKQDPNYLAMV-------AMNACEVIILDVRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 236 ~~~~~~~l~~~-------~~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+| +..+++. ..+. .|++||..+ ++.+..+. .+...+..|+++|+|.. +++...+++|++|++..
T Consensus 249 ~p--g~~~~~~g~~~v~~~~~~-~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~l-yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 249 IP--GFLFAVNGKPYFGDQEPV-QGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTV-YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ET--TEEEEEECCCCTTCSCCC-CEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEE-EEEESSSCCEEEEEEEE
T ss_pred cC--CEEEEeCCCEEeccCCCc-EEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCE-EEEECCCCEEEEEeCCc
Confidence 98 3333322 2234 499999987 77777763 56677899999999954 88888899999999976
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=5.7e-16 Score=129.65 Aligned_cols=249 Identities=12% Similarity=0.027 Sum_probs=166.1
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-C-------------------------cEEEEECCCCCchhheeccCCCCCCCcCc
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-D-------------------------YLRVWRAGEPETRLECILNNNKNSDFCAP 128 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-------------------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~ 128 (349)
..+.+++++|+++ ++++.. + .|.+||..+++.. .... ......
T Consensus 24 ~~v~~va~d~~G~-----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~----~~~~~~ 92 (329)
T 3fvz_A 24 GQVSGVALDSKNN-----LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSG----KNLFYL 92 (329)
T ss_dssp SCEEEEEECTTCC-----EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEEC----TTTCSS
T ss_pred CCceEEEECCCCC-----EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccC----CCccCC
Confidence 5699999999997 777766 3 3888988766421 1111 112246
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEc-CCC
Q psy17688 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVG-AEG 205 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~-~d~ 205 (349)
...++++| +++++++...++.|++||..... .+..+.... . ...-..+......++++| ++ .++++.+ .++
T Consensus 93 p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~-~-~g~~~~~~~~P~~ia~~~~~g---~lyv~d~~~~~ 166 (329)
T 3fvz_A 93 PHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM-Q-PGSDQNHFCQPTDVAVEPSTG---AVFVSDGYCNS 166 (329)
T ss_dssp EEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTT-B-CCCSTTCCSSEEEEEECTTTC---CEEEEECSSCC
T ss_pred ceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccC-C-CCCCccccCCCcEEEEeCCCC---eEEEEeCCCCC
Confidence 77899997 88888888889999999986542 221110000 0 000023445688999999 66 7888876 689
Q ss_pred cEEEEECCCCCceeeeeeCC--------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcce
Q psy17688 206 SVRMFDLRHLEHSTIIYEDP--------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACV 275 (349)
Q Consensus 206 ~v~iwd~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v 275 (349)
.|++||.. ++....+.... .-.....++++|..+.++++...++ .|++||..+ ++.+..+. .+...+
T Consensus 167 ~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~-~I~~~~~~~-G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 167 RIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG-RIQCFKTDT-KEFVREIKHASFGRNV 243 (329)
T ss_dssp EEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT-EEEEEETTT-CCEEEEECCTTTTTCE
T ss_pred eEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC-EEEEEECCC-CcEEEEEeccccCCCc
Confidence 99999944 44333332111 1133789999993367777777777 699999985 66676663 355678
Q ss_pred EEEEEee------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---ccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688 276 NGIAWAP------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---AAGGEINQIQWGATQPDWIAICYNKYLEV 346 (349)
Q Consensus 276 ~~~~~~p------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 346 (349)
..++|+| ++.. +++...+..|++||..++ ..+..+. .+...+.+++++|+|..+++...+++|++
T Consensus 244 ~~~~~~pg~~~~~~g~~-~v~~~~~~~v~~~~~~~g-----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKP-YFGDQEPVQGFVMNFSSG-----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp EEEEEETTEEEEEECCC-CTTCSCCCCEEEEETTTC-----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred ceeeecCCEEEEeCCCE-EeccCCCcEEEEEEcCCC-----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 8999999 3333 333344568999998773 3445552 45667899999999965566666899999
Q ss_pred eeC
Q psy17688 347 LRV 349 (349)
Q Consensus 347 w~v 349 (349)
|++
T Consensus 318 ~~~ 320 (329)
T 3fvz_A 318 FTL 320 (329)
T ss_dssp EEE
T ss_pred EeC
Confidence 974
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=2.2e-15 Score=123.47 Aligned_cols=238 Identities=10% Similarity=0.087 Sum_probs=162.0
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-----cCCCCeeEEEEe-cCCCCCCCcEEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-----DHPYPTTKIMWI-PDRKGVFPDLLAT 96 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~~~~~~~l~~ 96 (349)
..+.+++++| +|++ +++.+. ++.|.+|+.+ ++....... .+...+..+++. +++. ++++
T Consensus 30 ~~p~~v~~~~--~g~l-~v~~~~----~~~i~~~d~~---g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-----l~v~ 94 (286)
T 1q7f_A 30 TEPSGVAVNA--QNDI-IVADTN----NHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-----IIVT 94 (286)
T ss_dssp SCEEEEEECT--TCCE-EEEEGG----GTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-----EEEE
T ss_pred CCCceEEECC--CCCE-EEEECC----CCEEEEECCC---CcEEEEecccCCCcccccCceEEEEEcCCCe-----EEEE
Confidence 3688999998 8884 666666 8899999764 332221111 233568899995 6665 6666
Q ss_pred eC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688 97 SG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK 173 (349)
Q Consensus 97 ~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 173 (349)
.. + .|.+|+.+ ++. ...+.. .....+.++++++ +++++++...++.|.+||.. ++..
T Consensus 95 ~~~~~~~i~~~d~~-g~~--~~~~~~----~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~----------- 154 (286)
T 1q7f_A 95 ERSPTHQIQIYNQY-GQF--VRKFGA----TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVL----------- 154 (286)
T ss_dssp ECGGGCEEEEECTT-SCE--EEEECT----TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-----------
T ss_pred cCCCCCEEEEECCC-CcE--EEEecC----ccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEE-----------
Confidence 63 4 99999943 321 111111 1124578899997 78888877788999999964 3433
Q ss_pred eeee--ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 174 TQLI--AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 174 ~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
..+. .+...+..++++|++ +++++...++.|++||... +....+........+..++++| +++++++...++.
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQ---EIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNF 229 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSS---EEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSC
T ss_pred EEeCCCCccCCcEEEEECCCC---CEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCE
Confidence 2222 344568999999998 7888888899999999854 3333332222235688999999 8888877776641
Q ss_pred EEEEEeccCCCcceeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 252 EVIILDVRVPCTPVARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.|.+||.. ++.+..+..+.. .+..++++|+|.. +++ +.|+.|++|++..
T Consensus 230 ~i~~~~~~--g~~~~~~~~~~~~~~~~~i~~~~~g~l-~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 230 NLTIFTQD--GQLISALESKVKHAQCFDVALMDDGSV-VLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEECTT--SCEEEEEEESSCCSCEEEEEEETTTEE-EEE-ETTTEEEEEECSC
T ss_pred EEEEECCC--CCEEEEEcccCCCCcceeEEECCCCcE-EEE-CCCCeEEEEEccc
Confidence 49999964 566666655433 4789999999975 666 5699999999865
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=2.2e-15 Score=126.28 Aligned_cols=268 Identities=10% Similarity=0.032 Sum_probs=174.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..+.+++|+| ++.. ++.... ++.++.|. ++... ....+...+.+++|+|+++ +++++. + .
T Consensus 6 ~~~~~~~~~~--~~~~-~~~~~~----~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~g~-----l~~~~~~~~~ 67 (333)
T 2dg1_A 6 QDLPTLFYSG--KSNS-AVPIIS----ESELQTIT-----AEPWL-EISKKGLQLEGLNFDRQGQ-----LFLLDVFEGN 67 (333)
T ss_dssp CCCCBCCSCG--GGGC-SSCCCC----GGGSCEEE-----CEEEE-EEESSCCCEEEEEECTTSC-----EEEEETTTCE
T ss_pred cccceeeecC--Cccc-eeEEee----cccCcccc-----cceeE-EEeccCccccCcEECCCCC-----EEEEECCCCE
Confidence 3577888998 6653 555444 67778882 11111 1234556789999999997 877766 4 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeeeecccCCceeeee
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGRVNSVSGHVKTQL 176 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~ 176 (349)
|.+|+.++++.. .....+ ...+.+++|++ +++++++...+ +.|.+||..++.....+ ..
T Consensus 68 i~~~d~~~~~~~--~~~~~~-----~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~---------~~ 130 (333)
T 2dg1_A 68 IFKINPETKEIK--RPFVSH-----KANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDII---------ED 130 (333)
T ss_dssp EEEECTTTCCEE--EEEECS-----SSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEE---------CS
T ss_pred EEEEeCCCCcEE--EEeeCC-----CCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE---------cc
Confidence 999998876422 111111 25688999997 78877777666 68999998876653110 00
Q ss_pred eccCCceeeEEEecCCCCccEEEEEcC------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE-eeC
Q psy17688 177 IAHDKEVYDIAFSRAGGGRDMFASVGA------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV-AMN 249 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d 249 (349)
..+...+.+++++|++ +++++... .+.|..+|..+++...... ....+..++|+| +++.++++ ..+
T Consensus 131 ~~~~~~~~~i~~d~~g---~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~-dg~~l~v~~~~~ 203 (333)
T 2dg1_A 131 LSTAYCIDDMVFDSKG---GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---NISVANGIALST-DEKVLWVTETTA 203 (333)
T ss_dssp SSSCCCEEEEEECTTS---CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---EESSEEEEEECT-TSSEEEEEEGGG
T ss_pred CccCCcccceEECCCC---CEEEEeccccccCCCceEEEEeCCCCEEEEeec---CCCcccceEECC-CCCEEEEEeCCC
Confidence 1234568999999998 67776654 3567777766544322221 123578899999 88766554 456
Q ss_pred CcEEEEEeccCCCcceeE--------eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC
Q psy17688 250 ACEVIILDVRVPCTPVAR--------LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG 321 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~--------~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 321 (349)
+ .|.+||+...+..+.. +.++ ..+..++++++|.. +++...++.|.+||... ..+..+..+..
T Consensus 204 ~-~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l-~v~~~~~~~v~~~d~~g------~~~~~~~~~~~ 274 (333)
T 2dg1_A 204 N-RLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNL-YVAMYGQGRVLVFNKRG------YPIGQILIPGR 274 (333)
T ss_dssp T-EEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCE-EEEEETTTEEEEECTTS------CEEEEEECTTG
T ss_pred C-eEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCE-EEEEcCCCEEEEECCCC------CEEEEEEcCCC
Confidence 7 5999999642332221 1122 46788999999986 66666778999998742 23444544332
Q ss_pred ------ceEEEEEcCCCCceEEEEcC
Q psy17688 322 ------EINQIQWGATQPDWIAICYN 341 (349)
Q Consensus 322 ------~v~~~~~~~~~~~l~~~~~d 341 (349)
.+.+++|+|++..|++++.+
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ccccccCcceEEECCCCCEEEEEeCc
Confidence 68999999998777766665
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=5.3e-16 Score=142.32 Aligned_cols=242 Identities=7% Similarity=0.002 Sum_probs=148.7
Q ss_pred eEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cccccceEec---CCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688 27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SEFGPKSTID---HPYPTTKIMWIPDRKGVFPDLLATSG-D-- 99 (349)
Q Consensus 27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~l~~~~-~-- 99 (349)
+..|+.++||++.||.+.. .+..|.+++++... ++........ |...+..++|+||++ .|+.++ +
T Consensus 81 ~~~~~~SPDg~~~la~~~~---~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~-----~l~~~~~~~~ 152 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHF---GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG-----EVWCMAEEFT 152 (662)
T ss_dssp CEEEECCSSSSCEEEEEBT---TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT-----EEEEEEEEEC
T ss_pred cceeeeecCCCeEEEEEEC---CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC-----EEEEEEeccc
Confidence 5667622399841555432 14455555443002 3322221111 556789999999998 665543 2
Q ss_pred ---------cEEEEECCCCC----chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--------eEEEEecc-
Q psy17688 100 ---------YLRVWRAGEPE----TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--------TCTIWCLE- 157 (349)
Q Consensus 100 ---------~i~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~- 157 (349)
.|.+|++.+.. .....+...+. ..+..++|+| +++.|+.++.++ .|.+||+.
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 153 GEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH-----RFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp SSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS-----SEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred CCCCCCceeEEEEEECCCCccccCCceeEEEecCC-----CcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 68899987721 11222210211 4677789998 999998887553 79999998
Q ss_pred Cc---ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC--cEEEEECCCCCceeeeeeCCCCC----
Q psy17688 158 TN---QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG--SVRMFDLRHLEHSTIIYEDPQHT---- 228 (349)
Q Consensus 158 ~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~---- 228 (349)
++ +.. .....|...+..++|+|++ +++++++.++ .|.+||+.+++...... .+..
T Consensus 227 ~g~~~~~~-----------~l~~~~~~~~~~~~~spdg---~l~~~~~~~~~~~l~~~~~~~~~~~~l~~--~~~~~~~p 290 (662)
T 3azo_A 227 DGRFADTR-----------TLLGGPEEAIAQAEWAPDG---SLIVATDRTGWWNLHRVDPATGAATQLCR--REEEFAGP 290 (662)
T ss_dssp TSCEEEEE-----------EEEEETTBCEEEEEECTTS---CEEEEECTTSSCEEEEECTTTCCEEESSC--CSSBSSCC
T ss_pred CCcccccE-----------EeCCCCCceEcceEECCCC---eEEEEECCCCCeEEEEEECCCCceeeccc--ccccccCc
Confidence 45 222 2334556789999999999 7888888888 66677765654332221 1111
Q ss_pred ----ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE-EEEEcCCCcEEEEEe
Q psy17688 229 ----PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH-ICTAGDDHQALIWDI 302 (349)
Q Consensus 229 ----~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~~~~~d~~v~iwd~ 302 (349)
.+..++|+| ++.+++++.. + .+++|.+...+..+..+..|...+..+ |++++..+ +++++.+....+|.+
T Consensus 291 ~w~~~~~~~~~~~-~~~~~~~~~~-~-~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 291 LWTPGMRWFAPLA-NGLIAVVHGK-G-AAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp CCSTTCCSEEECT-TSCEEEEEBS-S-SCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEE
T ss_pred cccccCceEeEeC-CCEEEEEEEc-C-ccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEE
Confidence 156789999 8899999988 8 599995543234467777777777766 25556543 444455554455543
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=4.3e-15 Score=125.25 Aligned_cols=259 Identities=15% Similarity=0.089 Sum_probs=161.9
Q ss_pred CceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS 97 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~ 97 (349)
..+...+| ||++ +|...... ..++.|.+|+++ +++.. .+ ..+..++|+||++ .|+..
T Consensus 15 ~~~~~~~~----dG~~-i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~---~l---~~~~~~~~SpDg~-----~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT----KGEL-VAYVLTKANLKDNKYENTIVIENLK--NNARR---FI---ENATMPRISPDGK-----KIAFM 76 (347)
T ss_dssp CEEEEEEE----ETTE-EEEEEEEEETTTTEEEEEEEEEETT--TCCEE---EE---ESCEEEEECTTSS-----EEEEE
T ss_pred EEcccceE----CCcE-EEEEEeecCcccCCccceEEEEeCC--CCceE---Ec---ccCCCeEECCCCC-----EEEEE
Confidence 34556665 6885 66543211 125567777665 33322 12 4688999999998 66654
Q ss_pred C-----C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----------------------
Q psy17688 98 G-----D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---------------------- 148 (349)
Q Consensus 98 ~-----~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------------- 148 (349)
+ + .|.+|++.+++. ..+... . . +..+.|+| +++.|+.++.+
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~--~~l~~~-~-----~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSS--KKILEA-K-----N-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEE--EEEEEE-S-----E-EEEEEECT-TSSEEEEEEECCCC---------CCCC------
T ss_pred EeccCCCcceEEEEECCCCce--EEEEcC-C-----C-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 3 2 488888876542 112111 1 3 78899998 88888887642
Q ss_pred -----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-------cEEEEECCCCC
Q psy17688 149 -----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-------SVRMFDLRHLE 216 (349)
Q Consensus 149 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-------~v~iwd~~~~~ 216 (349)
..|.+||+.+++... .+.. . .+..++|+|++ +++++..++ ...+|.+.+++
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~-----------~l~~-~-~~~~~~~spdg----~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIE-----------EFEK-P-RFSSGIWHRDK----IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp ---CEEEEEEEETTTTEEEE-----------EEEE-E-TTCEEEEETTE----EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred ccCccceEEEEECCCCeEEe-----------eecC-C-CcccccCCCCe----EEEEEecccccccccccccEEEeCCCc
Confidence 568999998877631 2222 3 78899999986 555554432 33444443433
Q ss_pred ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-------cEEEEEeccCCCcceeEeecCCcceEE-EEEeeCCCCEE
Q psy17688 217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-------CEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHSSCHI 288 (349)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l 288 (349)
. ..+.. + ..+..+ +| +++.|+.++.+. ..|.+|| . ++.......+...+.. +.|+ ++ . +
T Consensus 210 ~-~~l~~--~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~-~ 276 (347)
T 2gop_A 210 E-EKMFE--K-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-V-Y 276 (347)
T ss_dssp E-EEEEE--E-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-E-E
T ss_pred e-EEecc--C-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-E-E
Confidence 2 22222 1 334443 89 888877766432 1488888 3 4444444556677886 9999 87 4 9
Q ss_pred EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeE-EEee
Q psy17688 289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYL-EVLR 348 (349)
Q Consensus 289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v-~vw~ 348 (349)
++++.++.+++| +.. ... ..+..+...|.+++|+| ..+++++.++.. .+|.
T Consensus 277 ~~~~~~~~~~l~-~~~-----g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 277 FTLFEEGSVNLY-IWD-----GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEEEETTEEEEE-EES-----SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred EEEecCCcEEEE-EcC-----Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 999999999999 873 122 33334477899999999 456666666554 6664
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.1e-15 Score=130.86 Aligned_cols=235 Identities=11% Similarity=0.012 Sum_probs=146.9
Q ss_pred EEEecCCCCCCCcEEEEeC--C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688 80 IMWIPDRKGVFPDLLATSG--D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW 154 (349)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~--~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw 154 (349)
.+|+||++ .|+.++ + .|.+||+.+++. ..+...+. ..+..+.|+| +++.|+.++.++.|.+|
T Consensus 41 ~~~SpDg~-----~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~-----~~~~~~~~sp-dg~~l~~~~~~~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGS-----KLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRG-----DNTFGGFLSP-DDDALFYVKDGRNLMRV 107 (388)
T ss_dssp CCBCTTSC-----EEEEEECTTSSCEEEEEETTTCEE--EECCCSSC-----BCSSSCEECT-TSSEEEEEETTTEEEEE
T ss_pred ccCCCCCC-----EEEEEEcCCCCceEEEEeCCCCce--EEeeeCCC-----CCccceEEcC-CCCEEEEEeCCCeEEEE
Confidence 78999998 555544 3 488888877642 22222222 3344578998 99999999999999999
Q ss_pred eccCcceeeeecccCCceeeeeeccCCceeeEE--EecCCCCccEEEEE----------------------cCCCcEEEE
Q psy17688 155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA--FSRAGGGRDMFASV----------------------GAEGSVRMF 210 (349)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~l~~~----------------------~~d~~v~iw 210 (349)
|+.+++.. ..+..+...+.... ++|++ ..++.. ..+..|.+|
T Consensus 108 d~~~g~~~-----------~~~~~~~~~~~~~~~~~~~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 108 DLATLEEN-----------VVYQVPAEWVGYGTWVANSDC---TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp ETTTCCEE-----------EEEECCTTEEEEEEEEECTTS---SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred ECCCCcce-----------eeeechhhcccccceeECCCC---CeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99988765 23334444443333 47887 566532 245789999
Q ss_pred ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----cEEEEEeccCCCcceeEeecCC--cceEEEEEeeC
Q psy17688 211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----CEVIILDVRVPCTPVARLNNHR--ACVNGIAWAPH 283 (349)
Q Consensus 211 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~p~ 283 (349)
|+.+++...... +...+..++|+|.++..|+....++ ..|.++|... .....+..+. ..+..+.|+|+
T Consensus 174 d~~~g~~~~l~~---~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 174 DLKTGESTVILQ---ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp ETTTCCEEEEEE---ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEEEEEECTT
T ss_pred ECCCCceEEeec---CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcccccceECCC
Confidence 999876544432 3456889999995566666555431 1377777753 3344444444 35788999999
Q ss_pred CCCEEEEEcCCC----cEEEEEeecCCCCCCCcEEEEeccCCc---eEEEEEcCCCCceEEE---------EcCCeEEEe
Q psy17688 284 SSCHICTAGDDH----QALIWDIQQMPRAIEDPILAYTAAGGE---INQIQWGATQPDWIAI---------CYNKYLEVL 347 (349)
Q Consensus 284 ~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~---------~~d~~v~vw 347 (349)
|+.++++...++ .|++||+.+++. ..+..+..+... ...+.|+|+|+.|+.. ..+..|.+|
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLEN---RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCE---EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCce---EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 998334333322 399999987432 122222221111 1234799999988764 345688888
Q ss_pred eC
Q psy17688 348 RV 349 (349)
Q Consensus 348 ~v 349 (349)
++
T Consensus 326 d~ 327 (388)
T 3pe7_A 326 NM 327 (388)
T ss_dssp ET
T ss_pred ec
Confidence 74
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=3.4e-14 Score=126.43 Aligned_cols=311 Identities=10% Similarity=0.017 Sum_probs=196.5
Q ss_pred CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEe----c
Q psy17688 9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI----P 84 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~ 84 (349)
+....+.+..+.....+..+.||| ||++ |.+++. ++.|.+|++...+++... .+........++|+ |
T Consensus 183 D~~t~~v~~~i~~g~~p~~v~~Sp--DGr~-lyv~~~----dg~V~viD~~~~t~~~v~--~i~~G~~P~~ia~s~~~~p 253 (567)
T 1qks_A 183 DGSTYEIKTVLDTGYAVHISRLSA--SGRY-LFVIGR----DGKVNMIDLWMKEPTTVA--EIKIGSEARSIETSKMEGW 253 (567)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCCEEE--EEECCSEEEEEEECCSTTC
T ss_pred ECCCCeEEEEEeCCCCccceEECC--CCCE-EEEEcC----CCeEEEEECCCCCCcEeE--EEecCCCCceeEEccccCC
Confidence 344455666777777788999999 9996 888776 899999988533344433 33334457899999 6
Q ss_pred CCCCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCC---CCCC-cCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688 85 DRKGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNK---NSDF-CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE 157 (349)
Q Consensus 85 ~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~---~~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 157 (349)
+++ ++++++ + .+.|+|..+.+........+.. ...+ ...+..+..++.....++....+|.|.++|..
T Consensus 254 DGk-----~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 254 EDK-----YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp TTT-----EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred CCC-----EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 998 666555 3 9999998876532221111100 0001 12566777777445566666677999999987
Q ss_pred CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeee-CCCCCceeEEE-
Q psy17688 158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYE-DPQHTPLLRLA- 234 (349)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~- 234 (349)
..+.+.. .. ........++.|+|++ +++ ++...++.|.++|+.+++....+.. .....+-....
T Consensus 329 ~~~~~~v---------~~-i~~~~~~~d~~~~pdg---r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 329 DLNNLKT---------TE-ISAERFLHDGGLDGSH---RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp CSSEEEE---------EE-EECCSSEEEEEECTTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred CCcccee---------ee-eeccccccCceECCCC---CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 7553310 11 2233456788999999 555 5555788999999999875544432 11111112222
Q ss_pred EeCCCCCeEEEEe-eCCcEEEEEeccCC------CcceeEeecCCcceEEEEEeeCCCCEEEEEcC-------CCcEEEE
Q psy17688 235 WNKQDPNYLAMVA-MNACEVIILDVRVP------CTPVARLNNHRACVNGIAWAPHSSCHICTAGD-------DHQALIW 300 (349)
Q Consensus 235 ~~~~~~~~l~~~~-~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-------d~~v~iw 300 (349)
++|..+..++++. .++ .|.++|.... .+.+.++......-..+..+|++++ |.+... .++|.++
T Consensus 396 ~~p~~g~v~~t~~~g~~-~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~-l~v~~~~~~~~~~~~~v~v~ 473 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDD-SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY-LYVDATLNPEAEISGSVAVF 473 (567)
T ss_dssp EETTTEEEEEEEBSSSS-EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE-EEEECTTCSSHHHHTCEEEE
T ss_pred ECCCCCcEEEeCCCCCC-eEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe-EEEecCCCCCcccCceEEEE
Confidence 5783355555554 346 6999998752 2355666654334355788999998 555442 3589999
Q ss_pred EeecCCCC-CCCcEEEEe--------ccCCceEEEEEcCCCCceEEEEc-----CCeEEEee
Q psy17688 301 DIQQMPRA-IEDPILAYT--------AAGGEINQIQWGATQPDWIAICY-----NKYLEVLR 348 (349)
Q Consensus 301 d~~~~~~~-~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vw~ 348 (349)
|+.+.+.. .......+. .-...+.++.|+|+|..+.++.. ++.|.|++
T Consensus 474 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 474 DIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp EGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred ECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEE
Confidence 99985110 011222221 11457899999999998887754 58888876
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=1.9e-15 Score=139.27 Aligned_cols=277 Identities=10% Similarity=-0.012 Sum_probs=171.1
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceE-----ecCCCCeeEEEEecCCCCCCCcEEE-----EeCC--cEE
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----IDHPYPTTKIMWIPDRKGVFPDLLA-----TSGD--YLR 102 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~l~-----~~~~--~i~ 102 (349)
+|++ ++.....+ ....-.||..+...++...... .+|...+..++||||++ +|| .|++ .|+
T Consensus 78 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~-----~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 78 RNGR-FFYVRTHK-DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK-----KVAFAQKPNAADEAVLH 150 (695)
T ss_dssp ETTE-EEEEEECT-TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS-----EEEEEEEETTCSCCEEE
T ss_pred ECCE-EEEEEEcC-CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC-----EEEEEECCCCCceEEEE
Confidence 8996 77665521 1113456665543343222111 13445689999999999 777 3443 899
Q ss_pred EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe-------------EEEEeccCcceeeeecccC
Q psy17688 103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT-------------CTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~ 169 (349)
+||+.+++......+.. .....++|+| +++.|+.++.|.. |++|++.+++...
T Consensus 151 v~dl~tg~~~~~~~~~~-------~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~------ 216 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVIEG-------GKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD------ 216 (695)
T ss_dssp EEETTTCCBCSSCCBSC-------CTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC------
T ss_pred EEECCCCCCcCCcccCc-------ccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc------
Confidence 99999875320001111 1125789998 9999999988776 9999998876320
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC----cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG----SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM 245 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 245 (349)
.++.....+...+..+.|+|++ ++|+.++.++ .|.+||..+++..... . +...+....| + ++.+++.
T Consensus 217 -~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~-~--~~~~~~~~~~-~-~g~l~~~ 287 (695)
T 2bkl_A 217 -TVVHERTGDPTTFLQSDLSRDG---KYLFVYILRGWSENDVYWKRPGEKDFRLLV-K--GVGAKYEVHA-W-KDRFYVL 287 (695)
T ss_dssp -EEEECCCCCTTCEEEEEECTTS---CCEEEEEEETTTEEEEEEECTTCSSCEEEE-E--CSSCCEEEEE-E-TTEEEEE
T ss_pred -eEEEecCCCCEEEEEEEECCCC---CEEEEEEeCCCCceEEEEEcCCCCceEEee-c--CCCceEEEEe-c-CCcEEEE
Confidence 0112233455678899999999 6777776655 6777766554433322 2 2334555566 4 4445444
Q ss_pred Ee---eCCcEEEEEeccCCCcc--eeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688 246 VA---MNACEVIILDVRVPCTP--VARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA 318 (349)
Q Consensus 246 ~~---~d~~~i~v~d~~~~~~~--~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 318 (349)
.. .++ .|.+||+.+ +.. ...+..+ ...+..++|+ ++. ++++...|+..++|.+... ......+..
T Consensus 288 s~~~~~~~-~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~----g~~~~~l~~ 359 (695)
T 2bkl_A 288 TDEGAPRQ-RVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLK----GKPVRTVQL 359 (695)
T ss_dssp ECTTCTTC-EEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETT----CCEEEECCC
T ss_pred ECCCCCCC-EEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCC----CCeeEEecC
Confidence 43 246 699999976 332 2444433 4567888887 444 4889999999999877631 112333443
Q ss_pred c-CCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688 319 A-GGEINQIQWGATQPDWIAICY----NKYLEVLRV 349 (349)
Q Consensus 319 ~-~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v 349 (349)
+ .+.+..++++|+++.++.... .+.|++|++
T Consensus 360 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 360 PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 3 567888999999876664333 267888864
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=7.2e-15 Score=135.74 Aligned_cols=279 Identities=9% Similarity=-0.001 Sum_probs=172.3
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccce-----EecCCCCeeEEEEecCCCCCCCcEEEEeC-----C--cEE
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS-----TIDHPYPTTKIMWIPDRKGVFPDLLATSG-----D--YLR 102 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----~--~i~ 102 (349)
+|++ ++.....+ ....-.||..+...++..... ..++...+..++||||++ .||.+. + .|+
T Consensus 82 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~-----~la~~~~~~G~~~~~i~ 154 (710)
T 2xdw_A 82 KGKR-YFYFYNTG-LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE-----YFAYGLSASGSDWVTIK 154 (710)
T ss_dssp ETTE-EEEEEECS-SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS-----EEEEEEEETTCSCEEEE
T ss_pred ECCE-EEEEEEcC-CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC-----EEEEEEcCCCCceEEEE
Confidence 8996 66655421 111224555543333322110 112334688999999998 666432 2 799
Q ss_pred EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe----------------EEEEeccCcceeeeec
Q psy17688 103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT----------------CTIWCLETNQVVGRVN 166 (349)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~ 166 (349)
+||+.+++.... .... ..+..++|+| +++.|+.++.++. |++|++.+++...
T Consensus 155 v~d~~tg~~~~~-~~~~-------~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~--- 222 (710)
T 2xdw_A 155 FMKVDGAKELPD-VLER-------VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED--- 222 (710)
T ss_dssp EEETTTTEEEEE-EEEE-------ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC---
T ss_pred EEECCCCCCCcc-cccC-------cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc---
Confidence 999988753221 1111 2356799998 9999998888766 9999998776320
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----CCcEEEEECCC------CC-ceeeeeeCCCCCceeEEE
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----EGSVRMFDLRH------LE-HSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~~~v~~~~ 234 (349)
..+.....|...+..+.|+|++ ++|+.++. +..|++||+.+ +. ....+. .+...+.. .
T Consensus 223 ----~~v~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~--~~~~~~~~-~ 292 (710)
T 2xdw_A 223 ----ILCAEFPDEPKWMGGAELSDDG---RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI--DNFEGEYD-Y 292 (710)
T ss_dssp ----EEEECCTTCTTCEEEEEECTTS---CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE--CSSSSCEE-E
T ss_pred ----eEEeccCCCCeEEEEEEEcCCC---CEEEEEEEccCCCccEEEEEECcccccccCCccceEEee--CCCCcEEE-E
Confidence 0001122244557899999999 67776654 57899999986 42 222232 22233333 5
Q ss_pred EeCCCCCeEEEEeeCC---cEEEEEeccCCCc-ceeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEE--EEeecCC
Q psy17688 235 WNKQDPNYLAMVAMNA---CEVIILDVRVPCT-PVARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALI--WDIQQMP 306 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~-~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~i--wd~~~~~ 306 (349)
|+| ++..|+..+..+ ..|.+||+..... ....+..|.. .+..+.|++++.. +++...|+..+| ||+..+
T Consensus 293 ~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-v~~~~~~g~~~l~~~~~~~g- 369 (710)
T 2xdw_A 293 VTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL-VLCYLHDVKNTLQLHDLATG- 369 (710)
T ss_dssp EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE-EEEEEETTEEEEEEEETTTC-
T ss_pred Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE-EEEEEECCEEEEEEEECCCC-
Confidence 888 777666655432 1499999876321 2355555544 6888999866554 888888886555 555332
Q ss_pred CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688 307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICY----NKYLEVLRV 349 (349)
Q Consensus 307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v 349 (349)
..+..+..+.+.+..+.++|+++.++.... .+.+.+|++
T Consensus 370 ----~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 370 ----ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp ----CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred ----CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 234556666778899999998876664433 267888764
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=1.8e-14 Score=133.08 Aligned_cols=250 Identities=12% Similarity=0.047 Sum_probs=163.1
Q ss_pred ceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.+..++||| ||++ ||.+.... .....|++|+++ +++.... ...+ ..+..++|+||++ .|+.++ + .
T Consensus 126 ~~~~~~~SP--Dg~~-la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~~-~~~~~~~wspDg~-----~l~~~~~~~~ 193 (710)
T 2xdw_A 126 ALRGYAFSE--DGEY-FAYGLSASGSDWVTIKFMKVD--GAKELPD-VLER-VKFSCMAWTHDGK-----GMFYNAYPQQ 193 (710)
T ss_dssp EEEEEEECT--TSSE-EEEEEEETTCSCEEEEEEETT--TTEEEEE-EEEE-ECSCCEEECTTSS-----EEEEEECCCC
T ss_pred EEEEEEECC--CCCE-EEEEEcCCCCceEEEEEEECC--CCCCCcc-cccC-cccceEEEEeCCC-----EEEEEEECCc
Confidence 578899998 9996 88776521 111278999875 4444432 2222 2367899999998 555444 3 4
Q ss_pred ----------------EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-----CCeEEEEeccC-
Q psy17688 101 ----------------LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-----DTTCTIWCLET- 158 (349)
Q Consensus 101 ----------------i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~- 158 (349)
|.+|++.++......+.... .+...+..+.|+| ++++|+.++. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~---~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP---DEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT---TCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccC---CCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECccc
Confidence 99999987643222222221 1224567899998 8888887765 56899999986
Q ss_pred -----cc-eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C---CcEEEEECCCCCc--eeeeeeCCC
Q psy17688 159 -----NQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E---GSVRMFDLRHLEH--STIIYEDPQ 226 (349)
Q Consensus 159 -----~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d---~~v~iwd~~~~~~--~~~~~~~~~ 226 (349)
+. .. ..+..+...+.. .|+|++ ..|+..+. + +.|.+||+.+++. ...+.....
T Consensus 270 ~~~~~~~~~~-----------~~l~~~~~~~~~-~~s~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 270 SNGITGILKW-----------VKLIDNFEGEYD-YVTNEG---TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp SSSSCSSCCC-----------EEEECSSSSCEE-EEEEET---TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred ccccCCccce-----------EEeeCCCCcEEE-EEeccC---CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 42 22 344555555544 488888 55555443 2 3699999987642 223322222
Q ss_pred CCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc---CCCcEEEEEe
Q psy17688 227 HTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG---DDHQALIWDI 302 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~ 302 (349)
...+..++|++ ++.++++...++. .|.+||+.. ++.+..+..+.+.+..+.++|+++.++++.+ ..+.++.||+
T Consensus 335 ~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 335 KDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp SCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 23688899997 7888888888873 255566644 5666777777788999999999877444433 3578999998
Q ss_pred ecCC
Q psy17688 303 QQMP 306 (349)
Q Consensus 303 ~~~~ 306 (349)
.+++
T Consensus 413 ~tg~ 416 (710)
T 2xdw_A 413 TKEE 416 (710)
T ss_dssp TSSS
T ss_pred CCCc
Confidence 7644
No 181
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=5.7e-13 Score=109.62 Aligned_cols=273 Identities=7% Similarity=-0.060 Sum_probs=179.2
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..+.++++++ +|++ .++... ++.|.+|+.+ +++...........+.++++.+++. ++++.. + .
T Consensus 15 ~~~~~i~~d~--~g~l-~v~~~~----~~~v~~~d~~---~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~ 79 (299)
T 2z2n_A 15 TGPYGITVSD--KGKV-WITQHK----ANMISCINLD---GKITEYPLPTPDAKVMCLTISSDGE-----VWFTENAANK 79 (299)
T ss_dssp CCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTE
T ss_pred CCccceEECC--CCCE-EEEecC----CCcEEEEcCC---CCeEEecCCcccCceeeEEECCCCC-----EEEeCCCCCe
Confidence 5789999998 8984 444333 6789999765 3333221112446799999999987 777665 4 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|..|+.+. .. . ..... .....+.++.+.+ ++.++++...++.|..||. +++... .......
T Consensus 80 i~~~~~~g-~~--~-~~~~~---~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~----------~~~~~~~ 140 (299)
T 2z2n_A 80 IGRITKKG-II--K-EYTLP---NPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIRE----------YELPNKG 140 (299)
T ss_dssp EEEECTTS-CE--E-EEECS---STTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEE----------EECSSTT
T ss_pred EEEECCCC-cE--E-EEeCC---CcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEE----------ecCCCCC
Confidence 99998762 21 1 11111 1124678899987 7777777777889999998 544331 1122234
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~ 260 (349)
..+..+++.+++ +++++...++.|..||. +++... .........+..+++++ ++.++++...++ .|.+||. +
T Consensus 141 ~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~-~i~~~~~-~ 212 (299)
T 2z2n_A 141 SYPSFITLGSDN---ALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGN-DDALWFVEIIGN-KIGRITT-S 212 (299)
T ss_dssp CCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTT-EEEEECT-T
T ss_pred CCCceEEEcCCC---CEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECC-CCCEEEEccCCc-eEEEECC-C
Confidence 568899999988 78887777889999998 544332 22222345688999999 777666655567 5999998 4
Q ss_pred CCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEE
Q psy17688 261 PCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIA 337 (349)
Q Consensus 261 ~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~ 337 (349)
+.... ....+...+.+++++++|.. +++...++.|..||... .+..+ ..+...+.++++ +++. +.+
T Consensus 213 -g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~~~~i~~~d~~g-------~~~~~~~~~~~~~~~~i~~-~~g~-l~v 281 (299)
T 2z2n_A 213 -GEITEFKIPTPNARPHAITAGAGIDL-WFTEWGANKIGRLTSNN-------IIEEYPIQIKSAEPHGICF-DGET-IWF 281 (299)
T ss_dssp -CCEEEEECSSTTCCEEEEEECSTTCE-EEEETTTTEEEEEETTT-------EEEEEECSSSSCCEEEEEE-CSSC-EEE
T ss_pred -CcEEEEECCCCCCCceeEEECCCCCE-EEeccCCceEEEECCCC-------ceEEEeCCCCCCccceEEe-cCCC-EEE
Confidence 43222 22334567899999999885 66666788999999732 12233 233467899999 8887 444
Q ss_pred EEcCCeEEEee
Q psy17688 338 ICYNKYLEVLR 348 (349)
Q Consensus 338 ~~~d~~v~vw~ 348 (349)
+...+.+..++
T Consensus 282 ~~~~~~l~~~~ 292 (299)
T 2z2n_A 282 AMECDKIGKLT 292 (299)
T ss_dssp EETTTEEEEEE
T ss_pred EecCCcEEEEE
Confidence 44455555543
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=6e-14 Score=115.52 Aligned_cols=236 Identities=10% Similarity=0.010 Sum_probs=157.8
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
....+++|+| +|+..+++++. ++.|..|+.+. + .. ....+...+.+++++|++. ++++.. + .
T Consensus 28 ~~~eg~~~d~--~g~~l~~~~~~----~~~i~~~~~~~--~-~~--~~~~~~~~~~~l~~~~dg~-----l~v~~~~~~~ 91 (296)
T 3e5z_A 28 TWTEGPVYVP--ARSAVIFSDVR----QNRTWAWSDDG--Q-LS--PEMHPSHHQNGHCLNKQGH-----LIACSHGLRR 91 (296)
T ss_dssp SSEEEEEEEG--GGTEEEEEEGG----GTEEEEEETTS--C-EE--EEESSCSSEEEEEECTTCC-----EEEEETTTTE
T ss_pred ccccCCeEeC--CCCEEEEEeCC----CCEEEEEECCC--C-eE--EEECCCCCcceeeECCCCc-----EEEEecCCCe
Confidence 5677899999 88733677776 88999997753 2 21 2234566799999999998 777765 3 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEE----EEc-------------CCeEEEEeccCcceee
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGT----SSI-------------DTTCTIWCLETNQVVG 163 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~ 163 (349)
|.+|+..+++.. ....... ......+.+++++| +++++++ |+. .+.|..++.. ++.
T Consensus 92 i~~~d~~~g~~~--~~~~~~~-~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-- 164 (296)
T 3e5z_A 92 LERQREPGGEWE--SIADSFE-GKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-- 164 (296)
T ss_dssp EEEECSTTCCEE--EEECEET-TEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE--
T ss_pred EEEEcCCCCcEE--EEeeccC-CCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE--
Confidence 999998766432 1111111 11113466789987 8888887 331 2455555554 332
Q ss_pred eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC-CCCc-e-eeeeeCCCCCceeEEEEeCCCC
Q psy17688 164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR-HLEH-S-TIIYEDPQHTPLLRLAWNKQDP 240 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~-~-~~~~~~~~~~~v~~~~~~~~~~ 240 (349)
..+..+......++|+|++ +.+++.+.++.|.+||+. .++. . .... ......+..+++++ ++
T Consensus 165 ----------~~~~~~~~~~~gi~~s~dg---~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~-~G 229 (296)
T 3e5z_A 165 ----------SAPIRDRVKPNGLAFLPSG---NLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA-GG 229 (296)
T ss_dssp ----------EEEECCCSSEEEEEECTTS---CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT-TS
T ss_pred ----------EEeecCCCCCccEEECCCC---CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC-CC
Confidence 2334555667899999999 677888888999999997 3332 1 1222 23445678899999 78
Q ss_pred CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE-eeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW-APHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+++++. ++ .|.+||.. ++.+..+..+.. +++++| .|+++. |++++.++ +.-++..+
T Consensus 230 ~l~v~~--~~-~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 230 LIWASA--GD-GVHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRT-LYMTVSTE-FWSIETNV 286 (296)
T ss_dssp CEEEEE--TT-EEEEECTT--SCEEEEEECSSC-CCEEEEESTTSCE-EEEEETTE-EEEEECSC
T ss_pred CEEEEc--CC-eEEEECCC--CCEEEEEECCCC-ceeEEEECCCCCE-EEEEcCCe-EEEEEccc
Confidence 766655 66 49999986 667777777777 999999 588887 66666553 33344433
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=3.1e-14 Score=120.45 Aligned_cols=278 Identities=11% Similarity=0.018 Sum_probs=169.1
Q ss_pred CCCceEEEEEeeec--ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-----------C-
Q psy17688 34 PDKLFRLAIGSYVE--EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-----------D- 99 (349)
Q Consensus 34 ~~~~~~la~g~~~~--~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----------~- 99 (349)
+++++ +.+..... ..++.|.+|+.. ++++.... ..+.. . .++|+|+++ ++.+++ +
T Consensus 13 ~~~~~-~yv~~~~~~~~~d~~v~v~D~~--t~~~~~~i-~~g~~-p-~i~~spdg~-----~lyv~~~~~~~~~~g~~~~ 81 (361)
T 2oiz_A 13 PQENR-IYVMDSVFMHLTESRVHVYDYT--NGKFLGMV-PTAFN-G-HVQVSNDGK-----KIYTMTTYHERITRGKRSD 81 (361)
T ss_dssp CGGGE-EEEEECCGGGGGGCEEEEEETT--TCCEEEEE-ECCEE-E-EEEECTTSS-----EEEEEEEEETTSSSSCEEE
T ss_pred CCCCE-EEEECCCCCccccCeEEEEECC--CCeEEEEe-cCCCC-C-ceEECCCCC-----EEEEEEecccccccCCCCC
Confidence 36774 55443211 126789999764 45544322 22222 3 899999998 554442 2
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeee-e
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQ-L 176 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~ 176 (349)
.|.+||..+.+........ ............++++| ++++|+++.. ++.|.+||+.+++.+. . +
T Consensus 82 ~v~v~d~~t~~~~~~i~~~-~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~-----------~~i 148 (361)
T 2oiz_A 82 VVEVWDADKLTFEKEISLP-PKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVE-----------DVT 148 (361)
T ss_dssp EEEEEETTTCCEEEEEEEC-TTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEE-----------EEG
T ss_pred EEEEEECcCCcEEEEEEcC-ccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEE-----------EEe
Confidence 7999999875432221111 11111123456789998 8999988874 5789999999987762 2 2
Q ss_pred eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeee---eCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688 177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIY---EDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 252 (349)
. .. ....+.+.|++. ..+++.+.||.+.+|++.. ++...... ..........+.++| ++..++..+.++ .
T Consensus 149 ~-~~-~~~~v~~~p~~~--~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~-~ 222 (361)
T 2oiz_A 149 A-AA-GCWSVIPQPNRP--RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPAL-DKDKAHFVSYYG-N 222 (361)
T ss_dssp G-GT-TEEEEEECTTSS--SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEE-CSSEEEEEBTTS-E
T ss_pred c-CC-CcceeEEcCCCC--eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecc-cCCEEEEEeCCC-e
Confidence 2 11 223356677663 6788889999999999875 33221111 001111122334456 566677777788 6
Q ss_pred EEEEeccCCCc-ceeEeec------CC----cceEEEEEeeCCCCEEEEEc----------CCCcEEEEEeecCCCCCCC
Q psy17688 253 VIILDVRVPCT-PVARLNN------HR----ACVNGIAWAPHSSCHICTAG----------DDHQALIWDIQQMPRAIED 311 (349)
Q Consensus 253 i~v~d~~~~~~-~~~~~~~------~~----~~v~~~~~~p~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~ 311 (349)
+.++|+..... ....+.. +. .....++|+|+++.++++.. ..+.|.+||+.+ .+
T Consensus 223 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-----~~ 297 (361)
T 2oiz_A 223 VYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-----KQ 297 (361)
T ss_dssp EEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-----TE
T ss_pred EEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-----Cc
Confidence 99999864221 1111111 00 11123789999888444433 134799999988 34
Q ss_pred cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 312 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.+..+..+. +.+++|+|+|++|++++. +.|.+|++
T Consensus 298 ~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 298 RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 566677755 999999999998887776 99999974
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=3.8e-14 Score=115.01 Aligned_cols=235 Identities=10% Similarity=-0.002 Sum_probs=155.8
Q ss_pred CeeEEEEecCCCCCCCcEEE-EeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688 76 PTTKIMWIPDRKGVFPDLLA-TSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT 152 (349)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~l~-~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~ 152 (349)
...++++++++. +++ +.. + .|.+|+..+... ..... .....+.++++++ +++++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g~-----l~v~~~~~~~~i~~~~~~~~~~---~~~~~----~~~~~p~~i~~~~-~g~l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAGN-----VYVTSEGMYGRVVKLATGSTGT---TVLPF----NGLYQPQGLAVDG-AGTVYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTCC-----EEEEECSSSCEEEEECC--------EECCC----CSCCSCCCEEECT-TCCEEEEET-TTEEE
T ss_pred CccceEECCCCC-----EEEEccCCCCcEEEecCCCccc---ceEee----CCcCCcceeEECC-CCCEEEEcC-CCEEE
Confidence 678999999987 777 534 4 899998765431 11111 1113566789987 777665555 88999
Q ss_pred EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688 153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR 232 (349)
Q Consensus 153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 232 (349)
+||....... .........+.+++++|++ +++++...++.|.+||..+...... .......+..
T Consensus 91 ~~d~~~~~~~-----------~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~ 154 (270)
T 1rwi_B 91 TLAAGSNNQT-----------VLPFDGLNYPEGLAVDTQG---AVYVADRGNNRVVKLAAGSKTQTVL--PFTGLNDPDG 154 (270)
T ss_dssp EECTTCSCCE-----------ECCCCSCSSEEEEEECTTC---CEEEEEGGGTEEEEECTTCCSCEEC--CCCSCCSCCC
T ss_pred EEeCCCceEe-----------eeecCCcCCCcceEECCCC---CEEEEECCCCEEEEEECCCceeEee--ccccCCCcee
Confidence 9998765432 1111223568899999988 7888878889999998665432221 1122346789
Q ss_pred EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688 233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312 (349)
Q Consensus 233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 312 (349)
++++| +++++++...++ .|.+||... .........+...+..++++++|.. +++...++.|.+||......
T Consensus 155 i~~~~-~g~l~v~~~~~~-~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l-~v~~~~~~~v~~~~~~~~~~----- 225 (270)
T 1rwi_B 155 VAVDN-SGNVYVTDTDNN-RVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTV-YVTEHNTNQVVKLLAGSTTS----- 225 (270)
T ss_dssp EEECT-TCCEEEEEGGGT-EEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCE-EEEETTTSCEEEECTTCSCC-----
T ss_pred EEEeC-CCCEEEEECCCC-EEEEEecCC-CceEeecccCCCCceEEEECCCCCE-EEEECCCCcEEEEcCCCCcc-----
Confidence 99999 788776666677 599999875 3322222233367889999999954 77777788999999865221
Q ss_pred EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
......+...+.+++++++|..+++...++.|+++++
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 1111122356899999999986666667899999874
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=1.1e-14 Score=122.08 Aligned_cols=239 Identities=10% Similarity=0.078 Sum_probs=157.0
Q ss_pred CCeeEEEEecCCCCCCCcEEEE-eCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLAT-SGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT 152 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~-~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~ 152 (349)
..|.++.|+++.. .++. +++ .++.|.-. ....+..+. ..+.+++|++ ++++++++..++.|.
T Consensus 6 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----~~~~~~~~~~-~g~l~~~~~~~~~i~ 69 (333)
T 2dg1_A 6 QDLPTLFYSGKSN-----SAVPIISESELQTITAE-----PWLEISKKG-----LQLEGLNFDR-QGQLFLLDVFEGNIF 69 (333)
T ss_dssp CCCCBCCSCGGGG-----CSSCCCCGGGSCEEECE-----EEEEEESSC-----CCEEEEEECT-TSCEEEEETTTCEEE
T ss_pred cccceeeecCCcc-----ceeEEeecccCcccccc-----eeEEEeccC-----ccccCcEECC-CCCEEEEECCCCEEE
Confidence 3577888998876 3333 334 78888221 111222221 3567899997 888888888899999
Q ss_pred EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcEEEEECCCCCceeeeeeCCCCC
Q psy17688 153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
+||..+++.. .....+...+.+++++|++ +++++...+ +.|.+||..+++............
T Consensus 70 ~~d~~~~~~~-----------~~~~~~~~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 135 (333)
T 2dg1_A 70 KINPETKEIK-----------RPFVSHKANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY 135 (333)
T ss_dssp EECTTTCCEE-----------EEEECSSSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred EEeCCCCcEE-----------EEeeCCCCCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence 9999887654 2222456779999999998 777777766 689999998865442332222345
Q ss_pred ceeEEEEeCCCCCeEEEEee------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688 229 PLLRLAWNKQDPNYLAMVAM------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 302 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~ 302 (349)
.+..++++| +++++++... .+ .|..+|... + .+..+..+...+..++|+|+++.++++.+.++.|.+||+
T Consensus 136 ~~~~i~~d~-~g~l~v~~~~~~~~~~~~-~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 136 CIDDMVFDS-KGGFYFTDFRGYSTNPLG-GVYYVSPDF-R-TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp CEEEEEECT-TSCEEEEECCCBTTBCCE-EEEEECTTS-C-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cccceEECC-CCCEEEEeccccccCCCc-eEEEEeCCC-C-EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 789999999 7877776553 23 366666543 2 233333333457899999999874566667889999999
Q ss_pred ecCCCCCCC---c-EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 303 QQMPRAIED---P-ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 303 ~~~~~~~~~---~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
......... . ...+.. ...+..++++++|..+++...++.|.+|+
T Consensus 212 ~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 212 EDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp CTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred cCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 642110000 0 001112 14678899999998666666778999986
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=6e-14 Score=113.83 Aligned_cols=239 Identities=7% Similarity=-0.026 Sum_probs=160.7
Q ss_pred ceeeEEEeecCCCceEEE-EEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688 24 PLYSMNWSVRPDKLFRLA-IGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL 101 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la-~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i 101 (349)
...+++++| +|++ ++ +.+. ++.|.+|+.... ..... .......+.++++.+++. ++++..+ .|
T Consensus 25 ~p~~i~~~~--~g~l-~v~~~~~----~~~i~~~~~~~~--~~~~~-~~~~~~~p~~i~~~~~g~-----l~v~~~~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDS--AGNV-YVTSEGM----YGRVVKLATGST--GTTVL-PFNGLYQPQGLAVDGAGT-----VYVTDFNNRV 89 (270)
T ss_dssp CEEEEEECT--TCCE-EEEECSS----SCEEEEECC-------EEC-CCCSCCSCCCEEECTTCC-----EEEEETTTEE
T ss_pred CccceEECC--CCCE-EEEccCC----CCcEEEecCCCc--ccceE-eeCCcCCcceeEECCCCC-----EEEEcCCCEE
Confidence 788999998 8884 44 3344 788999865422 21111 123335688999999987 7776655 99
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
.+|+...... ...... ....+.++++++ ++.++++...++.|.+|+..+.... ........
T Consensus 90 ~~~d~~~~~~---~~~~~~----~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~ 150 (270)
T 1rwi_B 90 VTLAAGSNNQ---TVLPFD----GLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQT-----------VLPFTGLN 150 (270)
T ss_dssp EEECTTCSCC---EECCCC----SCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCE-----------ECCCCSCC
T ss_pred EEEeCCCceE---eeeecC----CcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeE-----------eeccccCC
Confidence 9999876432 111111 114578899987 7787777777889999976554332 11122234
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP 261 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~ 261 (349)
.+.++++++++ +++++...++.|.+||.......... ......+..+++++ ++.++++...++ .|.+||...
T Consensus 151 ~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~d~-~g~l~v~~~~~~-~v~~~~~~~- 222 (270)
T 1rwi_B 151 DPDGVAVDNSG---NVYVTDTDNNRVVKLEAESNNQVVLP--FTDITAPWGIAVDE-AGTVYVTEHNTN-QVVKLLAGS- 222 (270)
T ss_dssp SCCCEEECTTC---CEEEEEGGGTEEEEECTTTCCEEECC--CSSCCSEEEEEECT-TCCEEEEETTTS-CEEEECTTC-
T ss_pred CceeEEEeCCC---CEEEEECCCCEEEEEecCCCceEeec--ccCCCCceEEEECC-CCCEEEEECCCC-cEEEEcCCC-
Confidence 67899999988 78888778899999998875432211 12225688999999 777666666677 499999864
Q ss_pred CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 262 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
.........+...+.+++++|+|.. +++...++.|+++++...
T Consensus 223 ~~~~~~~~~~~~~p~~i~~~~~g~l-~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 223 TTSTVLPFTGLNTPLAVAVDSDRTV-YVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCCEECCCCSCSCEEEEEECTTCCE-EEEEGGGTEEEEECCCGG
T ss_pred CcceeeccCCCCCceeEEECCCCCE-EEEECCCCEEEEEcCCCc
Confidence 3222222223356899999999975 888888999999998774
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.3e-13 Score=113.43 Aligned_cols=232 Identities=9% Similarity=-0.010 Sum_probs=155.2
Q ss_pred cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688 72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT 149 (349)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 149 (349)
.+.....+++|+|+++. +++++. + .|..|+..++ . . .+..+ ...+.++++++ +++++++...++
T Consensus 25 ~~~~~~eg~~~d~~g~~----l~~~~~~~~~i~~~~~~~~-~--~-~~~~~-----~~~~~~l~~~~-dg~l~v~~~~~~ 90 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSA----VIFSDVRQNRTWAWSDDGQ-L--S-PEMHP-----SHHQNGHCLNK-QGHLIACSHGLR 90 (296)
T ss_dssp CCCSSEEEEEEEGGGTE----EEEEEGGGTEEEEEETTSC-E--E-EEESS-----CSSEEEEEECT-TCCEEEEETTTT
T ss_pred cCCccccCCeEeCCCCE----EEEEeCCCCEEEEEECCCC-e--E-EEECC-----CCCcceeeECC-CCcEEEEecCCC
Confidence 34456789999999863 555555 4 9999998875 1 1 22222 24678999997 888877776778
Q ss_pred eEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEE----c-------------CCCcEEEEE
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASV----G-------------AEGSVRMFD 211 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~----~-------------~d~~v~iwd 211 (349)
.|.+||..+++..... .... .....+.+++++|++ +++++. + ..+.|..+|
T Consensus 91 ~i~~~d~~~g~~~~~~--------~~~~~~~~~~~~~i~~d~~G---~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 91 RLERQREPGGEWESIA--------DSFEGKKLNSPNDVCLAPDG---SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp EEEEECSTTCCEEEEE--------CEETTEECCCCCCEEECTTS---CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred eEEEEcCCCCcEEEEe--------eccCCCCCCCCCCEEECCCC---CEEEECCccccccccccccccccCCCcEEEEEC
Confidence 9999999877654110 0011 112346789999998 777773 2 134566666
Q ss_pred CCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc---eeEeecCCcceEEEEEeeCCCCEE
Q psy17688 212 LRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP---VARLNNHRACVNGIAWAPHSSCHI 288 (349)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l 288 (349)
.. ++. .... ........++|+| +++.+++.+.++ .|.+||+...+.. ...+..+...+..++++++|.. +
T Consensus 160 ~~-g~~-~~~~--~~~~~~~gi~~s~-dg~~lv~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l-~ 232 (296)
T 3e5z_A 160 PD-GTL-SAPI--RDRVKPNGLAFLP-SGNLLVSDTGDN-ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLI-W 232 (296)
T ss_dssp TT-SCE-EEEE--CCCSSEEEEEECT-TSCEEEEETTTT-EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCE-E
T ss_pred CC-CCE-EEee--cCCCCCccEEECC-CCCEEEEeCCCC-eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCE-E
Confidence 55 332 2221 3445678999999 888886666677 6999998732333 2233334556788999999985 5
Q ss_pred EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE-cCCCCceEEEEcCCeE
Q psy17688 289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW-GATQPDWIAICYNKYL 344 (349)
Q Consensus 289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~v 344 (349)
++. ++.|.+||... +.+..+..+.. +.+++| .|++..|++++.++..
T Consensus 233 v~~--~~~v~~~~~~g------~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~ 280 (296)
T 3e5z_A 233 ASA--GDGVHVLTPDG------DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFW 280 (296)
T ss_dssp EEE--TTEEEEECTTS------CEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEE
T ss_pred EEc--CCeEEEECCCC------CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEE
Confidence 554 78899999753 23556666566 899999 5888878888776543
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=2.4e-15 Score=129.02 Aligned_cols=232 Identities=10% Similarity=-0.015 Sum_probs=144.8
Q ss_pred eeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 77 TTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 77 v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
+..++|+|+++ .|+... + .|.+|++.+++. .. +.... ......+.|+| +++.|+.++.++.|
T Consensus 38 ~~~~~~SpdG~-----~l~~~~~~~g~~~l~~~d~~~~~~--~~-l~~~~----~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (396)
T 3c5m_A 38 FYQKCFTQDGK-----KLLFAGDFDGNRNYYLLNLETQQA--VQ-LTEGK----GDNTFGGFIST-DERAFFYVKNELNL 104 (396)
T ss_dssp TTSCCBCTTSC-----EEEEEECTTSSCEEEEEETTTTEE--EE-CCCSS----CBCTTTCEECT-TSSEEEEEETTTEE
T ss_pred eecCcCCCCCC-----EEEEEEecCCCceEEEEECCCCcE--EE-eecCC----CCccccceECC-CCCEEEEEEcCCcE
Confidence 77889999998 555432 2 688888877642 11 21111 11222377998 99999999999999
Q ss_pred EEEeccCcceeeeecccCCceeeeeeccCCceee-------------------EEEecCCCCccEEEEE-----cCCCcE
Q psy17688 152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD-------------------IAFSRAGGGRDMFASV-----GAEGSV 207 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~l~~~-----~~d~~v 207 (349)
.+||+.+++... ....+...... +.|+|++ +.++.. ..+..|
T Consensus 105 ~~~d~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg---~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 105 MKVDLETLEEQV-----------IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT---SWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp EEEETTTCCEEE-----------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC---SHHHHHHHHHTCCCEEE
T ss_pred EEEECCCCCcEE-----------EEecccccCCCCCEEEeccCCccccccccccccCCCC---cceeeeeeccCCCcceE
Confidence 999998876542 11212211111 3566776 454443 456789
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----cEEEEEeccCCCcceeEeecC--CcceEEEEE
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----CEVIILDVRVPCTPVARLNNH--RACVNGIAW 280 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~ 280 (349)
.+||+.+++..... .....+..+.|+|.++..|+..+.++ ..|.+||+.. +. ...+..+ ...+..+.|
T Consensus 171 ~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 171 IKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp EEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEE
T ss_pred EEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEE
Confidence 99999987654433 24467889999995466565554432 1488888864 32 3333333 235888999
Q ss_pred eeCCCCEEEEEcCC-----CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEE---------------
Q psy17688 281 APHSSCHICTAGDD-----HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAIC--------------- 339 (349)
Q Consensus 281 ~p~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--------------- 339 (349)
+|+|+. |+.++.+ +.|++||+.+... .. +.... ... +.|+| +++.+++++
T Consensus 246 spdg~~-l~~~~~~~~~~~~~l~~~d~~~g~~-----~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 246 IPDGSA-MAYVSYFKGQTDRVIYKANPETLEN-----EE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp CTTSSC-EEEEEEETTTCCEEEEEECTTTCCE-----EE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred CCCCCE-EEEEecCCCCccceEEEEECCCCCe-----EE-eeeCC-CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 999998 5555433 4499999876321 11 22112 233 89999 998666544
Q ss_pred -cCCeEEEeeC
Q psy17688 340 -YNKYLEVLRV 349 (349)
Q Consensus 340 -~d~~v~vw~v 349 (349)
.+..|.+|++
T Consensus 317 ~~~~~i~~~d~ 327 (396)
T 3c5m_A 317 ENDPFLYVLNT 327 (396)
T ss_dssp CCCCEEEEEET
T ss_pred CCCCcEEEEec
Confidence 2467888874
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=3.4e-14 Score=130.91 Aligned_cols=248 Identities=10% Similarity=0.029 Sum_probs=159.9
Q ss_pred ceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.+.+++||| ||++ ||.+.... ..+..|++|+++. ++......... .....++|+||++ .|+.++ + .
T Consensus 122 ~~~~~~~SP--DG~~-la~~~~~~G~~~~~i~v~dl~t--g~~~~~~~~~~-~~~~~~~wspDg~-----~l~~~~~d~~ 190 (695)
T 2bkl_A 122 SLGTWAVSW--DGKK-VAFAQKPNAADEAVLHVIDVDS--GEWSKVDVIEG-GKYATPKWTPDSK-----GFYYEWLPTD 190 (695)
T ss_dssp EEEEEEECT--TSSE-EEEEEEETTCSCCEEEEEETTT--CCBCSSCCBSC-CTTCCCEECTTSS-----EEEEEECCCC
T ss_pred EEEEEEECC--CCCE-EEEEECCCCCceEEEEEEECCC--CCCcCCcccCc-ccccceEEecCCC-----EEEEEEecCC
Confidence 588999998 9996 88665422 2246899998863 44331111111 1126899999998 555544 3 4
Q ss_pred -------------EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC----eEEEEeccCcceee
Q psy17688 101 -------------LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT----TCTIWCLETNQVVG 163 (349)
Q Consensus 101 -------------i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~ 163 (349)
|++|++.++......+.... .+...+..+.|+| ++++|+.++.++ .|.+|+..+++.
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~-- 264 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT---GDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDF-- 264 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC---CCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSC--
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecC---CCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCce--
Confidence 99999988753222332221 2224678899998 888888877666 677776654443
Q ss_pred eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCc--eeeeeeCCCCCceeEEEEeCC
Q psy17688 164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH--STIIYEDPQHTPLLRLAWNKQ 238 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 238 (349)
..+..+...+....+ +++ .+++.+. .++.|.+||+.+++. ...+........+..++|+
T Consensus 265 ----------~~l~~~~~~~~~~~~-~~g---~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-- 328 (695)
T 2bkl_A 265 ----------RLLVKGVGAKYEVHA-WKD---RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-- 328 (695)
T ss_dssp ----------EEEEECSSCCEEEEE-ETT---EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--
T ss_pred ----------EEeecCCCceEEEEe-cCC---cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--
Confidence 234455555666666 677 6444443 257899999987653 1233222224567888888
Q ss_pred CCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-CcceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecC
Q psy17688 239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-RACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQM 305 (349)
Q Consensus 239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~ 305 (349)
++.++++...++ ..++|.+...+.....+..+ .+.+..+.++|+++.++++.+ ..+.|++||+.++
T Consensus 329 ~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 329 GGHLSLEYLKDA-TSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp TTEEEEEEEETT-EEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCEEEEEEEECC-EEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 677888899998 58888765335555555544 667888899999987444443 3568999998764
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=8.2e-14 Score=117.36 Aligned_cols=216 Identities=10% Similarity=0.060 Sum_probs=139.4
Q ss_pred CCeeEEEEecCCCCCCCcEEEEe--------C--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATS--------G--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG 143 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~--------~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (349)
..+..+++ +++ .++.. . + .|.+|++.+++. . .+ ..+..+.|+| +++.|+
T Consensus 15 ~~~~~~~~--dG~-----~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~-~l---------~~~~~~~~Sp-Dg~~la 74 (347)
T 2gop_A 15 AYLSDPRT--KGE-----LVAYVLTKANLKDNKYENTIVIENLKNNAR--R-FI---------ENATMPRISP-DGKKIA 74 (347)
T ss_dssp CEEEEEEE--ETT-----EEEEEEEEEETTTTEEEEEEEEEETTTCCE--E-EE---------ESCEEEEECT-TSSEEE
T ss_pred EEcccceE--CCc-----EEEEEEeecCcccCCccceEEEEeCCCCce--E-Ec---------ccCCCeEECC-CCCEEE
Confidence 34667777 776 44432 1 3 788999887642 1 11 2467899998 898888
Q ss_pred EEEcC---C--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---------------
Q psy17688 144 TSSID---T--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA--------------- 203 (349)
Q Consensus 144 ~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--------------- 203 (349)
..+.+ + .|.+||+.+++.. .+..+.. +..++|+|++ +.|+.++.
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~------------~l~~~~~-~~~~~wspdg---~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSK------------KILEAKN-IRSLEWNEDS---RKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEE------------EEEEESE-EEEEEECTTS---SEEEEEEECCCC---------CC
T ss_pred EEEeccCCCcceEEEEECCCCceE------------EEEcCCC-ccceeECCCC---CEEEEEEccCCCcCCcEEEcccc
Confidence 87754 3 3778888877654 2222333 8999999999 67777653
Q ss_pred ------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----c-EEEEEeccCCCcce
Q psy17688 204 ------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----C-EVIILDVRVPCTPV 265 (349)
Q Consensus 204 ------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~-~i~v~d~~~~~~~~ 265 (349)
...|.+||+.+++....+.. . .+..++|+| ++ +++++..+. . ...+|.+.. ++ .
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~ 210 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWED-GK-E 210 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEET-TE-E
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCC-Cc-e
Confidence 25799999988765233322 2 788999999 77 777775542 0 144444442 44 3
Q ss_pred eEeecCCcceEEEEEeeCCCCEEEEEcCC--------CcEEEEEeecCCCCCCCcEEEEeccCCceEE-EEEcCCCCceE
Q psy17688 266 ARLNNHRACVNGIAWAPHSSCHICTAGDD--------HQALIWDIQQMPRAIEDPILAYTAAGGEINQ-IQWGATQPDWI 336 (349)
Q Consensus 266 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~ 336 (349)
..+..+ ..+..+ +|+|+. |+.++.+ ..|.+|| .. ........+...+.. +.|+ ++ .++
T Consensus 211 ~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~-----~~~~l~~~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GK-----EVMGILDEVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SS-----CEEESSTTCCSEEEEEEEET-TE-EEE
T ss_pred EEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CC-----ceEeccccCCcccCCccEEc-Cc-EEE
Confidence 334434 455544 999999 6555533 3677777 31 122223344667886 9999 88 777
Q ss_pred EEEcCCeEEEe
Q psy17688 337 AICYNKYLEVL 347 (349)
Q Consensus 337 ~~~~d~~v~vw 347 (349)
+++.++.+++|
T Consensus 278 ~~~~~~~~~l~ 288 (347)
T 2gop_A 278 TLFEEGSVNLY 288 (347)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 78888999998
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=5e-12 Score=103.99 Aligned_cols=273 Identities=9% Similarity=-0.045 Sum_probs=178.4
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..+.++++++ +|+. .++... ++.|.+|+.+ +++...........+.++++.+++. +.++.. + .
T Consensus 20 ~~p~~i~~d~--~g~l-~v~~~~----~~~v~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~ 84 (300)
T 2qc5_A 20 SGPYGITSSE--DGKV-WFTQHK----ANKISSLDQS---GRIKEFEVPTPDAKVMCLIVSSLGD-----IWFTENGANK 84 (300)
T ss_dssp CCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTE
T ss_pred CCcceeeECC--CCCE-EEEcCC----CCeEEEECCC---CceEEEECCCCCCcceeEEECCCCC-----EEEEecCCCe
Confidence 5788999987 8884 444434 6889999764 3333221112336789999999887 777665 4 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|..|+.. ++.. ...... ....+.++++.+ ++.++++...++.|..+|.. ++... ..+....
T Consensus 85 v~~~d~~-g~~~-~~~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~----------~~~~~~~ 145 (300)
T 2qc5_A 85 IGKLSKK-GGFT-EYPLPQ-----PDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYE----------YDLPNKG 145 (300)
T ss_dssp EEEECTT-SCEE-EEECSS-----TTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEE----------EECSSTT
T ss_pred EEEECCC-CCeE-EecCCC-----CCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEE----------ccCCCCC
Confidence 9999877 4321 111111 114578899986 77777777667899999987 54431 1122234
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~ 260 (349)
..+..+++.+++ +++++...++.|..+|. +++... .........+..+++++ ++.+.++....+ .|.+||..
T Consensus 146 ~~~~~i~~d~~g---~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~-~i~~~~~~- 217 (300)
T 2qc5_A 146 SYPAFITLGSDN---ALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGN-DGALWFVEIMGN-KIGRITTT- 217 (300)
T ss_dssp CCEEEEEECTTS---SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTT-EEEEECTT-
T ss_pred CCceeEEECCCC---CEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECC-CCCEEEEccCCC-EEEEEcCC-
Confidence 568899999988 77777777889999998 444332 22223345688999999 777666665666 59999983
Q ss_pred CCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEE
Q psy17688 261 PCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIA 337 (349)
Q Consensus 261 ~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~ 337 (349)
+.... .+..+...+.+++++++|.. +++...++.|..||... . +..+ ......+.+++++++|. +..
T Consensus 218 -g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~~~~~g-~------~~~~~~~~~~~~~~~i~~~~~g~-l~v 287 (300)
T 2qc5_A 218 -GEISEYDIPTPNARPHAITAGKNSEI-WFTEWGANQIGRITNDN-T------IQEYQLQTENAEPHGITFGKDGS-VWF 287 (300)
T ss_dssp -CCEEEEECSSTTCCEEEEEECSTTCE-EEEETTTTEEEEECTTS-C------EEEEECCSTTCCCCCEEECTTSC-EEE
T ss_pred -CcEEEEECCCCCCCceEEEECCCCCE-EEeccCCCeEEEECCCC-c------EEEEECCccCCccceeEeCCCCC-EEE
Confidence 33222 22334567899999999885 66666678999998732 1 2223 22245688999999997 544
Q ss_pred EEcCCeEEEee
Q psy17688 338 ICYNKYLEVLR 348 (349)
Q Consensus 338 ~~~d~~v~vw~ 348 (349)
++.+ .|..++
T Consensus 288 ~~~~-~i~~~~ 297 (300)
T 2qc5_A 288 ALKC-KIGKLN 297 (300)
T ss_dssp ECSS-EEEEEE
T ss_pred EccC-ceEEeC
Confidence 5444 665554
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.64 E-value=2e-13 Score=126.64 Aligned_cols=277 Identities=12% Similarity=0.016 Sum_probs=164.9
Q ss_pred CCceEEEEEeeecccCCeEEEEecccc---ccccccc-----eEecCCCCeeEEEEecCCCCCCCcEEEEeC-----C--
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNED---ISEFGPK-----STIDHPYPTTKIMWIPDRKGVFPDLLATSG-----D-- 99 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~---~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----~-- 99 (349)
||++ ++.....+ ....-.||..+.. .++.... ...++...+..++||||++ .||.+. +
T Consensus 117 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~-----~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 117 RGAS-VFYSWNSG-LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR-----LLAYSVQDGGSDWR 189 (741)
T ss_dssp ETTE-EEEEEECS-SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS-----EEEEEEEETTCSEE
T ss_pred ECCE-EEEEEEcC-CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC-----EEEEEEcCCCCceE
Confidence 9996 77665521 1113566665533 2322211 0112334688999999998 666543 2
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe--------------EEEEeccCcceeeee
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT--------------CTIWCLETNQVVGRV 165 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~~~~~ 165 (349)
.|++||+.+++.... .... ..+..++|+| + +.|+.++.++. |.+|++.+++...
T Consensus 190 ~i~v~dl~tg~~~~~-~~~~-------~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-- 257 (741)
T 1yr2_A 190 TVKFVGVADGKPLAD-ELKW-------VKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-- 257 (741)
T ss_dssp EEEEEETTTCCEEEE-EEEE-------EESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC--
T ss_pred EEEEEECCCCCCCCc-cCCC-------ceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC--
Confidence 699999998763211 1110 1235789998 7 88888776654 8899987765320
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCC--CceeeeeeCCCCCceeEEEEeCC
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHL--EHSTIIYEDPQHTPLLRLAWNKQ 238 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~ 238 (349)
..+.....+...+..+.|+|++ ++|+..+.+ ..|++||+.++ +....+.. ......... +|
T Consensus 258 -----~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~~-~~- 325 (741)
T 1yr2_A 258 -----QPVFATPELPKRGHGASVSSDG---RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP--DLKAQWDFV-DG- 325 (741)
T ss_dssp -----EEEECCTTCTTCEEEEEECTTS---CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC--SSSSCEEEE-EE-
T ss_pred -----EEEeccCCCCeEEEEEEECCCC---CEEEEEEEccCCCcceEEEEECCCCCCcccEEecC--CCCceEEEE-ec-
Confidence 0011112233357899999999 677776644 38999999876 31222322 223334443 47
Q ss_pred CCCeEEEEee----CCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688 239 DPNYLAMVAM----NACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI 313 (349)
Q Consensus 239 ~~~~l~~~~~----d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 313 (349)
++..|+..+. ++ .|.+||+.... .....+..+...+..+.|+ +..++++...|+..+||.+... ....
T Consensus 326 dg~~l~~~s~~~~~~~-~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~----g~~~ 398 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLK-KIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLD----GKPA 398 (741)
T ss_dssp ETTEEEEEECTTCTTC-EEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETT----SCEE
T ss_pred cCCEEEEEECCCCCCC-EEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC----CCce
Confidence 7777777665 34 49999987521 2233334445556677776 4445888889998888877631 1123
Q ss_pred EEEec-cCCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688 314 LAYTA-AGGEINQIQWGATQPDWIAICY----NKYLEVLRV 349 (349)
Q Consensus 314 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v 349 (349)
..+.. +.+.+..+.++|+++.++.... .+.|.+|++
T Consensus 399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 33433 2567889999999876664332 267888764
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=7.4e-13 Score=109.84 Aligned_cols=244 Identities=11% Similarity=0.062 Sum_probs=160.3
Q ss_pred CceeeEEEeecCCCceEEEE-------EeeecccCCeEEEEeccccccccccceE---ecCCCCeeEEEEecC-CCCCCC
Q psy17688 23 WPLYSMNWSVRPDKLFRLAI-------GSYVEEYNNKVQIVALNEDISEFGPKST---IDHPYPTTKIMWIPD-RKGVFP 91 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~-------g~~~~~~~g~i~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~~~~ 91 (349)
....+++|++ +|.+ +++ ++. ++.|.+|+.. ++++..... .++...+.+++++++ +.
T Consensus 18 ~~~~~~~~~~--~g~l-~~~~~~~~~~~~~----~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~---- 84 (314)
T 1pjx_A 18 PGAEGPVFDK--NGDF-YIVAPEVEVNGKP----AGEILRIDLK--TGKKTVICKPEVNGYGGIPAGCQCDRDANQ---- 84 (314)
T ss_dssp TTCEEEEECT--TSCE-EEEETTCEETTEE----CCEEEEECTT--TCCEEEEECCEETTEECCEEEEEECSSSSE----
T ss_pred CCccCceECC--CCCE-EEEEeccccCCCC----CCEEEEEeCC--CCcEEEEEecccCCCCCCCceEEEecCCCc----
Confidence 4668899997 8874 555 455 7889999654 344332211 013457899999999 75
Q ss_pred cEEEEeCC-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---------------CeEEEE
Q psy17688 92 DLLATSGD-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---------------TTCTIW 154 (349)
Q Consensus 92 ~~l~~~~~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------g~i~iw 154 (349)
++++..+ .|.+|+.+ ++. ... .... .......+.++++++ +++++++...+ +.|..|
T Consensus 85 -l~v~~~~~~l~~~d~~-g~~--~~~~~~~~-~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 85 -LFVADMRLGLLVVQTD-GTF--EEIAKKDS-EGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp -EEEEETTTEEEEEETT-SCE--EECCSBCT-TSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred -EEEEECCCCEEEEeCC-CCE--EEEEeccC-CCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEE
Confidence 6666655 89999987 432 111 1111 111124578899987 77777776654 567777
Q ss_pred eccCcceeeeecccCCceeeeeeccCCceeeEEEe----cCCCCccEE-EEEcCCCcEEEEECC-CCCce--eeeeeCC-
Q psy17688 155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS----RAGGGRDMF-ASVGAEGSVRMFDLR-HLEHS--TIIYEDP- 225 (349)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~l-~~~~~d~~v~iwd~~-~~~~~--~~~~~~~- 225 (349)
|.. ++.. .+..+......++++ |++ +.+ ++...++.|.+||+. .++.. .......
T Consensus 159 ~~~-g~~~------------~~~~~~~~~~~i~~~~~~d~dg---~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 159 TTD-GQMI------------QVDTAFQFPNGIAVRHMNDGRP---YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CTT-SCEE------------EEEEEESSEEEEEEEECTTSCE---EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred CCC-CCEE------------EeccCCCCcceEEEecccCCCC---CEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 765 4332 122333456889999 887 544 555678999999986 33211 1111111
Q ss_pred CC-CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 226 QH-TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 226 ~~-~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.. ..+..+++++ +++++++...++ .|.+||..+ ++.+..+..+...+.+++|+|+++.++++...++.|..|++..
T Consensus 223 ~~~~~p~~i~~d~-~G~l~v~~~~~~-~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 223 THEGGADGMDFDE-DNNLLVANWGSS-HIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSCEEEEEEEBT-TCCEEEEEETTT-EEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCceEECC-CCCEEEEEcCCC-EEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 22 4578899999 888877777777 599999875 5556666666678999999999986466666778999999875
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=5e-12 Score=112.54 Aligned_cols=274 Identities=14% Similarity=0.090 Sum_probs=175.3
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECC--CCCchhheeccCCCCCCC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAG--EPETRLECILNNNKNSDF 125 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~--~~~~~~~~~~~~~~~~~~ 125 (349)
++.|.+++.+ ++++... +.....+..+.|+||++ ++.+++ + .|.+||+. +.+. ...+...
T Consensus 176 ~~~V~viD~~--t~~v~~~--i~~g~~p~~v~~SpDGr-----~lyv~~~dg~V~viD~~~~t~~~--v~~i~~G----- 239 (567)
T 1qks_A 176 AGQIALIDGS--TYEIKTV--LDTGYAVHISRLSASGR-----YLFVIGRDGKVNMIDLWMKEPTT--VAEIKIG----- 239 (567)
T ss_dssp TTEEEEEETT--TCCEEEE--EECSSCEEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCCE--EEEEECC-----
T ss_pred CCeEEEEECC--CCeEEEE--EeCCCCccceEECCCCC-----EEEEEcCCCeEEEEECCCCCCcE--eEEEecC-----
Confidence 8999999775 4444433 33445678999999998 555555 5 99999995 4322 1222211
Q ss_pred cCceeEEEecC---CCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCC-ceeeEEEecCCCCccEEEE
Q psy17688 126 CAPLTSFDWNE---VDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK-EVYDIAFSRAGGGRDMFAS 200 (349)
Q Consensus 126 ~~~i~~~~~~~---~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~ 200 (349)
.....++|++ .+++++++++. ++.|.++|..+.+.+..+...... ......|.. .+..+..++++. .+++.
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~-~~~~~~~p~~rva~i~~s~~~~--~~vv~ 315 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT-YDEQEYHPEPRVAAILASHYRP--EFIVN 315 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC-TTTCCEESCCCEEEEEECSSSS--EEEEE
T ss_pred -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc-cccccccCCCceEEEEEcCCCC--EEEEE
Confidence 2356899993 38877776655 589999999998887543210000 000001222 577888888763 67777
Q ss_pred EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEeec-----CCcc
Q psy17688 201 VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARLNN-----HRAC 274 (349)
Q Consensus 201 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~-----~~~~ 274 (349)
...+|.|.++|....+...... .........+.|+| ++++++++.. ++ .|.++|+.+ ++.+..+.. |.+
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~p-dgr~~~va~~~sn-~V~ViD~~t-~kl~~~i~vgg~~Phpg- 390 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTE-ISAERFLHDGGLDG-SHRYFITAANARN-KLVVIDTKE-GKLVAIEDTGGQTPHPG- 390 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEE-EECCSSEEEEEECT-TSCEEEEEEGGGT-EEEEEETTT-TEEEEEEECSSSSBCCT-
T ss_pred ecCCCeEEEEecCCCccceeee-eeccccccCceECC-CCCEEEEEeCCCC-eEEEEECCC-CcEEEEEeccCcCCCCc-
Confidence 7888999999998765333222 22345577899999 8888877764 45 699999997 666555543 322
Q ss_pred eEEEE-EeeCCCCEEEEEc-CCCcEEEEEeecCCCC--CCCcEEEEeccCCceEEEEEcCCCCceEEEEc-------CCe
Q psy17688 275 VNGIA-WAPHSSCHICTAG-DDHQALIWDIQQMPRA--IEDPILAYTAAGGEINQIQWGATQPDWIAICY-------NKY 343 (349)
Q Consensus 275 v~~~~-~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~ 343 (349)
..+. ++|++..+++++. .++.|.++|......+ ..+.+..+......-..+..+|+++++.+... .++
T Consensus 391 -~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~ 469 (567)
T 1qks_A 391 -RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS 469 (567)
T ss_dssp -TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC
T ss_pred -cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce
Confidence 1222 5787555355554 4689999999873321 12345555553334355789999998887663 358
Q ss_pred EEEeeC
Q psy17688 344 LEVLRV 349 (349)
Q Consensus 344 v~vw~v 349 (349)
|.|+++
T Consensus 470 v~v~d~ 475 (567)
T 1qks_A 470 VAVFDI 475 (567)
T ss_dssp EEEEEG
T ss_pred EEEEEC
Confidence 888864
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.61 E-value=7.9e-13 Score=110.42 Aligned_cols=256 Identities=6% Similarity=-0.047 Sum_probs=165.0
Q ss_pred CCeEEEEeccccccccccceEe-----cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTI-----DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKN 122 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~ 122 (349)
++.|.+++.+ ++++...... ........+.+.. +. ++++.. + .|.+||..+.+... .+..
T Consensus 16 ~~~l~~~d~~--t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~-----lyv~~~~~~~v~viD~~t~~~~~--~i~~--- 82 (328)
T 3dsm_A 16 NATLSYYDPA--TCEVENEVFYRANGFKLGDVAQSMVIRD-GI-----GWIVVNNSHVIFAIDINTFKEVG--RITG--- 82 (328)
T ss_dssp CBEEEEEETT--TTEEECSHHHHHHSSCCBSCEEEEEEET-TE-----EEEEEGGGTEEEEEETTTCCEEE--EEEC---
T ss_pred CceEEEEECC--CCEEhhhhHhhhcCcccCccceEEEEEC-CE-----EEEEEcCCCEEEEEECcccEEEE--EcCC---
Confidence 7899999765 3443322110 1223467787754 32 555554 3 99999998875322 1221
Q ss_pred CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-----CceeeEEEecCCCCccE
Q psy17688 123 SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-----KEVYDIAFSRAGGGRDM 197 (349)
Q Consensus 123 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~ 197 (349)
......+++++ ++..+++...++.|.+||+.+++.... +.... .....+++ ..+ .+
T Consensus 83 ---~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~-----------i~~g~~~~~~~~p~~i~~-~~~---~l 143 (328)
T 3dsm_A 83 ---FTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGY-----------IECPDMDMESGSTEQMVQ-YGK---YV 143 (328)
T ss_dssp ---CSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEE-----------EECTTCCTTTCBCCCEEE-ETT---EE
T ss_pred ---CCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEE-----------EEcCCccccCCCcceEEE-ECC---EE
Confidence 14567888876 665444444789999999998887632 22111 14567777 444 55
Q ss_pred EEEEc-CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC----------CcEEEEEeccCCCccee
Q psy17688 198 FASVG-AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN----------ACEVIILDVRVPCTPVA 266 (349)
Q Consensus 198 l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~~i~v~d~~~~~~~~~ 266 (349)
+++.. .++.|.++|+.+++....+.. ......++++| ++++++++..+ + .|.++|..+ .+...
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~-~v~~id~~t-~~v~~ 217 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAP-SLYRIDAET-FTVEK 217 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCC-EEEEEETTT-TEEEE
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcC-CCCEEEEECCCccCCccccCCc-eEEEEECCC-CeEEE
Confidence 55554 488999999998765544432 24467889999 78877766654 6 599999986 66555
Q ss_pred EeecC-CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-----c
Q psy17688 267 RLNNH-RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-----Y 340 (349)
Q Consensus 267 ~~~~~-~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~ 340 (349)
.+... ......++|+|+++. |.++.. .|.+||..+...... .. +........+++++|++..+.++. .
T Consensus 218 ~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~-~~--~~~~~~~p~gi~vdp~~g~lyva~~~~y~~ 291 (328)
T 3dsm_A 218 QFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVR-PF--LEFRDTKYYGLTVNPNNGEVYVADAIDYQQ 291 (328)
T ss_dssp EEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSS-CS--BCCCSSCEEEEEECTTTCCEEEEECTTSSS
T ss_pred EEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeee-ee--ecCCCCceEEEEEcCCCCeEEEEccccccc
Confidence 55432 236899999999998 655544 899999877543111 11 111145688999999555566665 4
Q ss_pred CCeEEEeeC
Q psy17688 341 NKYLEVLRV 349 (349)
Q Consensus 341 d~~v~vw~v 349 (349)
++.|.+|+.
T Consensus 292 ~~~V~v~d~ 300 (328)
T 3dsm_A 292 QGIVYRYSP 300 (328)
T ss_dssp EEEEEEECT
T ss_pred CCEEEEECC
Confidence 689999873
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.59 E-value=7.8e-12 Score=102.77 Aligned_cols=235 Identities=10% Similarity=-0.025 Sum_probs=158.7
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (349)
+...+.++++.+++. +.++.. + .|.+|+.. +... ...... ....+.++++++ ++.++++...++.
T Consensus 13 ~~~~~~~i~~d~~g~-----l~v~~~~~~~v~~~d~~-~~~~-~~~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~ 79 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK-----VWITQHKANMISCINLD-GKIT-EYPLPT-----PDAKVMCLTISS-DGEVWFTENAANK 79 (299)
T ss_dssp SSCCEEEEEECTTSC-----EEEEETTTTEEEEECTT-CCEE-EEECSS-----TTCCEEEEEECT-TSCEEEEETTTTE
T ss_pred cCCCccceEECCCCC-----EEEEecCCCcEEEEcCC-CCeE-EecCCc-----ccCceeeEEECC-CCCEEEeCCCCCe
Confidence 345789999999997 766665 4 89999987 4321 111111 125678899987 7777777666889
Q ss_pred EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL 230 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v 230 (349)
|..||.. ++.. . ..+......+.++++.+++ .++++...++.|..||. +++... .........+
T Consensus 80 i~~~~~~-g~~~-~---------~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~ 143 (299)
T 2z2n_A 80 IGRITKK-GIIK-E---------YTLPNPDSAPYGITEGPNG---DIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYP 143 (299)
T ss_dssp EEEECTT-SCEE-E---------EECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCE
T ss_pred EEEECCC-CcEE-E---------EeCCCcCCCceeeEECCCC---CEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCC
Confidence 9999976 3321 0 1112234568899999988 78888778899999998 443322 2222234568
Q ss_pred eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688 231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI 309 (349)
Q Consensus 231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~ 309 (349)
..+++++ ++.++++...++ .|..||. . ++.... +......+..+++++++.. +++...++.|.+||. ...
T Consensus 144 ~~i~~~~-~g~l~v~~~~~~-~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~~~~i~~~~~-~g~--- 214 (299)
T 2z2n_A 144 SFITLGS-DNALWFTENQNN-AIGRITE-S-GDITEFKIPTPASGPVGITKGNDDAL-WFVEIIGNKIGRITT-SGE--- 214 (299)
T ss_dssp EEEEECT-TSCEEEEETTTT-EEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECT-TCC---
T ss_pred ceEEEcC-CCCEEEEeCCCC-EEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCE-EEEccCCceEEEECC-CCc---
Confidence 9999999 777777666667 5999998 4 443322 2334456889999999885 666666888999998 422
Q ss_pred CCcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 310 EDPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 310 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
...+ ..+...+.+++++++|..+++...++.|.+|+
T Consensus 215 ---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 215 ---ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp ---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred ---EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 1222 22346789999999997444444668888876
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=3.1e-12 Score=103.78 Aligned_cols=220 Identities=11% Similarity=0.050 Sum_probs=152.2
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhh
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLE 114 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~ 114 (349)
.+++ |++++. ++.|.+|+.+ +|+.+-.........+.++.++|+++ ++++..+.|..||. +++...
T Consensus 4 ~~~~-lv~~~~----~~~v~~~d~~--tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~~~~V~~~d~-~G~~~W- 69 (276)
T 3no2_A 4 PQHL-LVGGSG----WNKIAIINKD--TKEIVWEYPLEKGWECNSVAATKAGE-----ILFSYSKGAKMITR-DGRELW- 69 (276)
T ss_dssp CCEE-EEECTT----CSEEEEEETT--TTEEEEEEECCTTCCCCEEEECTTSC-----EEEECBSEEEEECT-TSCEEE-
T ss_pred CCcE-EEeeCC----CCEEEEEECC--CCeEEEEeCCCccCCCcCeEECCCCC-----EEEeCCCCEEEECC-CCCEEE-
Confidence 3564 888877 9999999653 56665443322224689999999998 88854459999998 554222
Q ss_pred eeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC
Q psy17688 115 CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG 193 (349)
Q Consensus 115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 193 (349)
.+.... ...+.++.+.+ +++.+++.+. ++.|..+|. +++.+..+.... ....+......++..+++
T Consensus 70 -~~~~~~----~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~-----~~~~~~~~~~~v~~~~~G- 136 (276)
T 3no2_A 70 -NIAAPA----GCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFET-----GIERPHAQFRQINKNKKG- 136 (276)
T ss_dssp -EEECCT----TCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECC-----SCSSGGGSCSCCEECTTS-
T ss_pred -EEcCCC----CccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC-----CCCcccccccCceECCCC-
Confidence 222211 13567788887 8999998887 778888886 566654321100 001222345667888888
Q ss_pred CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-
Q psy17688 194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR- 272 (349)
Q Consensus 194 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~- 272 (349)
+++++...++.|..||.. ++....... ...+.++...+ ++++++++..++ .|..+|..+ ++.+.++..+.
T Consensus 137 --~~lv~~~~~~~v~~~d~~-G~~~w~~~~---~~~~~~~~~~~-~g~~~v~~~~~~-~v~~~d~~t-G~~~w~~~~~~~ 207 (276)
T 3no2_A 137 --NYLVPLFATSEVREIAPN-GQLLNSVKL---SGTPFSSAFLD-NGDCLVACGDAH-CFVQLNLES-NRIVRRVNANDI 207 (276)
T ss_dssp --CEEEEETTTTEEEEECTT-SCEEEEEEC---SSCCCEEEECT-TSCEEEECBTTS-EEEEECTTT-CCEEEEEEGGGS
T ss_pred --CEEEEecCCCEEEEECCC-CCEEEEEEC---CCCccceeEcC-CCCEEEEeCCCC-eEEEEeCcC-CcEEEEecCCCC
Confidence 899999999999999998 665544432 24566777888 889998888888 599999987 88888876432
Q ss_pred -----cceEEEEEeeCCCCEEEEE
Q psy17688 273 -----ACVNGIAWAPHSSCHICTA 291 (349)
Q Consensus 273 -----~~v~~~~~~p~~~~~l~~~ 291 (349)
..+..+...++|.. +++.
T Consensus 208 ~~~~l~~~~~~~~~~~G~i-~v~~ 230 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGL-YICN 230 (276)
T ss_dssp BSCCCSEEEEEEECTTSCE-EEEE
T ss_pred CCccccccccceEcCCCCE-EEEe
Confidence 23778888888886 5554
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=6.3e-12 Score=104.20 Aligned_cols=241 Identities=8% Similarity=0.052 Sum_probs=153.3
Q ss_pred CCeeEEEEecCCCCCCCcEEEE-------eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEE
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLAT-------SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGT 144 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~-------~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~ 144 (349)
....+++|.+++. ++++ +. + .|.+|+..+++.. .. .......+...+.++.+++ + +.+++
T Consensus 18 ~~~~~~~~~~~g~-----l~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~-~~~~~~~~~~~~~~i~~~~-~~g~l~v- 87 (314)
T 1pjx_A 18 PGAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEILRIDLKTGKKT--VI-CKPEVNGYGGIPAGCQCDR-DANQLFV- 87 (314)
T ss_dssp TTCEEEEECTTSC-----EEEEETTCEETTEECCEEEEECTTTCCEE--EE-ECCEETTEECCEEEEEECS-SSSEEEE-
T ss_pred CCccCceECCCCC-----EEEEEeccccCCCCCCEEEEEeCCCCcEE--EE-EecccCCCCCCCceEEEec-CCCcEEE-
Confidence 4578999999887 7776 33 4 8999998766432 11 1100011224678899987 6 55444
Q ss_pred EEcCCeEEEEeccCcceeee-ecccCCceeeee-eccCCceeeEEEecCCCCccEEEEEcCC---------------CcE
Q psy17688 145 SSIDTTCTIWCLETNQVVGR-VNSVSGHVKTQL-IAHDKEVYDIAFSRAGGGRDMFASVGAE---------------GSV 207 (349)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d---------------~~v 207 (349)
++..+.|.+||.. ++.... . ... ......+.++++++++ +++++...+ +.|
T Consensus 88 ~~~~~~l~~~d~~-g~~~~~~~--------~~~~~~~~~~~~~i~~d~~g---~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 88 ADMRLGLLVVQTD-GTFEEIAK--------KDSEGRRMQGCNDCAFDYEG---NLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp EETTTEEEEEETT-SCEEECCS--------BCTTSCBCBCCCEEEECTTS---CEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred EECCCCEEEEeCC-CCEEEEEe--------ccCCCccccCCcCEEECCCC---CEEEEecCcccccccccccccCCCCeE
Confidence 4444578999987 554310 0 000 0112358899999998 677776654 567
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEe----CCCCCeEEEE-eeCCcEEEEEeccCCCc-----ceeEeecCC-cceE
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWN----KQDPNYLAMV-AMNACEVIILDVRVPCT-----PVARLNNHR-ACVN 276 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~-~~d~~~i~v~d~~~~~~-----~~~~~~~~~-~~v~ 276 (349)
..||.. ++...... .......++|+ | +++.++++ ..++ .|.+||....+. ....+..+. ..+.
T Consensus 156 ~~~~~~-g~~~~~~~---~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDT---AFQFPNGIAVRHMNDG-RPYQLIVAETPTK-KLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp EEECTT-SCEEEEEE---EESSEEEEEEEECTTS-CEEEEEEEETTTT-EEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred EEECCC-CCEEEecc---CCCCcceEEEecccCC-CCCEEEEEECCCC-eEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 777765 33322221 22346789999 9 77665555 4566 599999862132 222333333 5678
Q ss_pred EEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688 277 GIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV 349 (349)
Q Consensus 277 ~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v 349 (349)
.++++++|.. +++...++.|.+||..++. .+..+..+...+.+++|+|++..|++++. ++.|..|++
T Consensus 230 ~i~~d~~G~l-~v~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 230 GMDFDEDNNL-LVANWGSSHIEVFGPDGGQ-----PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEBTTCCE-EEEEETTTEEEEECTTCBS-----CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred ceEECCCCCE-EEEEcCCCEEEEEcCCCCc-----EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 8999999976 6666678899999987422 23445555678999999999985655554 578888864
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=6.7e-12 Score=104.74 Aligned_cols=238 Identities=11% Similarity=-0.001 Sum_probs=155.0
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-CC-cE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-GD-YL 101 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~~-~i 101 (349)
....+.+. +++. .++... ++.|.+|+.. +++.... +........+++++++. ++++. .+ .|
T Consensus 45 ~~~~i~~~---~~~l-yv~~~~----~~~v~viD~~--t~~~~~~--i~~~~~p~~i~~~~~g~-----lyv~~~~~~~v 107 (328)
T 3dsm_A 45 VAQSMVIR---DGIG-WIVVNN----SHVIFAIDIN--TFKEVGR--ITGFTSPRYIHFLSDEK-----AYVTQIWDYRI 107 (328)
T ss_dssp CEEEEEEE---TTEE-EEEEGG----GTEEEEEETT--TCCEEEE--EECCSSEEEEEEEETTE-----EEEEEBSCSEE
T ss_pred cceEEEEE---CCEE-EEEEcC----CCEEEEEECc--ccEEEEE--cCCCCCCcEEEEeCCCe-----EEEEECCCCeE
Confidence 45667765 4553 444444 7899999775 4444332 23456789999999885 77776 34 99
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
.+||..+.+... .+..............+++ . ++.++++.. .++.|.++|+.+++... .+.. .
T Consensus 108 ~~iD~~t~~~~~--~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~-----------~i~~-g 171 (328)
T 3dsm_A 108 FIINPKTYEITG--YIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD-----------ELTI-G 171 (328)
T ss_dssp EEEETTTTEEEE--EEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE-----------EEEC-S
T ss_pred EEEECCCCeEEE--EEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE-----------EEEc-C
Confidence 999998764321 1121110111113345666 2 444444443 48899999999988763 2322 2
Q ss_pred CceeeEEEecCCCCccEEEEEcCC----------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAE----------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
.....++++|++ ++++++..+ +.|.++|..+++....+.. ........++++| ++..|+++..
T Consensus 172 ~~p~~i~~~~dG---~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-~~g~~p~~la~~~-d~~~lyv~~~-- 244 (328)
T 3dsm_A 172 IQPTSLVMDKYN---KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-KLGDWPSEVQLNG-TRDTLYWINN-- 244 (328)
T ss_dssp SCBCCCEECTTS---EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC-CTTCCCEEEEECT-TSCEEEEESS--
T ss_pred CCccceEEcCCC---CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec-CCCCCceeEEEec-CCCEEEEEcc--
Confidence 346789999998 777776654 7899999998764433322 2234689999999 8888887755
Q ss_pred cEEEEEeccCCCccee-E-eecCCcceEEEEEeeCCCCEEEEE----cCCCcEEEEEee
Q psy17688 251 CEVIILDVRVPCTPVA-R-LNNHRACVNGIAWAPHSSCHICTA----GDDHQALIWDIQ 303 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~-~-~~~~~~~v~~~~~~p~~~~~l~~~----~~d~~v~iwd~~ 303 (349)
. |.+||..+ ++... . +.........++++|++..++++. ..++.|.+||..
T Consensus 245 ~-v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 D-IWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S-EEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred E-EEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 3 99999976 44321 1 222245688999999766646666 678899999987
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.57 E-value=1.3e-11 Score=101.52 Aligned_cols=235 Identities=11% Similarity=0.026 Sum_probs=150.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRV 103 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~v 103 (349)
-.-+..|+| ++...+.+... ++.|..|+.+ +++.. .......+.+++++++++ ++++..+.|.+
T Consensus 14 ~~Egp~w~~--~~~~l~~~d~~----~~~i~~~d~~--~~~~~---~~~~~~~~~~i~~~~dG~-----l~v~~~~~l~~ 77 (297)
T 3g4e_A 14 CGESPVWEE--VSNSLLFVDIP----AKKVCRWDSF--TKQVQ---RVTMDAPVSSVALRQSGG-----YVATIGTKFCA 77 (297)
T ss_dssp BEEEEEEET--TTTEEEEEETT----TTEEEEEETT--TCCEE---EEECSSCEEEEEEBTTSS-----EEEEETTEEEE
T ss_pred cccCCeEEC--CCCEEEEEECC----CCEEEEEECC--CCcEE---EEeCCCceEEEEECCCCC-----EEEEECCeEEE
Confidence 345778887 55533555555 7889888765 33332 234567899999999998 77766559999
Q ss_pred EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---------CeEEEEeccCcceeeeecccCCceee
Q psy17688 104 WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---------TTCTIWCLETNQVVGRVNSVSGHVKT 174 (349)
Q Consensus 104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~ 174 (349)
||.++++... +..... ......+.++.++| +++++++...+ ..-.+|.+...... .
T Consensus 78 ~d~~~g~~~~--~~~~~~-~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-----------~ 142 (297)
T 3g4e_A 78 LNWKEQSAVV--LATVDN-DKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-----------K 142 (297)
T ss_dssp EETTTTEEEE--EEECCT-TCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-----------E
T ss_pred EECCCCcEEE--EEecCC-CCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCE-----------E
Confidence 9988764321 111111 11124578899987 78766654322 23345554432222 1
Q ss_pred eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC--CCCce--eeeeeC-CCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR--HLEHS--TIIYED-PQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
.+..+....+.++|+|++. .++++.+.++.|.+||+. ++... ..+... .....+..+++++ ++++.++....
T Consensus 143 ~~~~~~~~pngi~~spdg~--~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~ 219 (297)
T 3g4e_A 143 KYFDQVDISNGLDWSLDHK--IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNG 219 (297)
T ss_dssp EEEEEESBEEEEEECTTSC--EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETT
T ss_pred EEeeccccccceEEcCCCC--EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCC
Confidence 2223334568999999983 345666778999999974 44321 122211 1234678899999 78776666666
Q ss_pred CcEEEEEeccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEEcCC
Q psy17688 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAGDD 294 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~d 294 (349)
+ .|..||..+ ++.+..+..+...+++++|. |+++.++++...+
T Consensus 220 ~-~v~~~d~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 G-RVIRLDPVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp T-EEEEECTTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred C-EEEEEcCCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 7 599999986 77778887777789999999 8888755555443
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=2.4e-12 Score=119.46 Aligned_cols=246 Identities=15% Similarity=0.112 Sum_probs=154.8
Q ss_pred ceeeEEEeecCCCceEEEEEeeecc-cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEE-YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-- 99 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-- 99 (349)
.+..++||| ||++ ||.++.... ....|++|+++ +++..... . +...+..++|+|| + .|+.++ +
T Consensus 164 ~~~~~~~SP--DG~~-la~~~~~~G~e~~~i~v~dl~--tg~~~~~~-~-~~~~~~~~~wspD-~-----~l~~~~~~~~ 230 (741)
T 1yr2_A 164 ALDAWAASD--DGRL-LAYSVQDGGSDWRTVKFVGVA--DGKPLADE-L-KWVKFSGLAWLGN-D-----ALLYSRFAEP 230 (741)
T ss_dssp EEEEEEECT--TSSE-EEEEEEETTCSEEEEEEEETT--TCCEEEEE-E-EEEESCCCEESTT-S-----EEEEEECCCC
T ss_pred EEEeEEECC--CCCE-EEEEEcCCCCceEEEEEEECC--CCCCCCcc-C-CCceeccEEEECC-C-----EEEEEEecCc
Confidence 678899998 9996 887765211 11468888775 44443221 1 1112367899999 7 444433 3
Q ss_pred -------------cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-----eEEEEeccCc--
Q psy17688 100 -------------YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-----TCTIWCLETN-- 159 (349)
Q Consensus 100 -------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~-- 159 (349)
.|.+|++.++......+.... .+...+..+.|+| +++.|+..+.++ .|.+||+.++
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP---ELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCT---TCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccC---CCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence 288999877643222232221 1113477899998 898888777554 8999999876
Q ss_pred ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC----CCcEEEEECCCCC-ceeeeeeCCCCCceeEEE
Q psy17688 160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA----EGSVRMFDLRHLE-HSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~ 234 (349)
+.. ..+..+...+.... +|++ ..|+..+. ++.|.+||+.++. ....+. ......+..++
T Consensus 307 ~~~-----------~~l~~~~~~~~~~~-~~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~ 370 (741)
T 1yr2_A 307 GPV-----------TALIPDLKAQWDFV-DGVG---DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVG 370 (741)
T ss_dssp CCC-----------EEEECSSSSCEEEE-EEET---TEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEE
T ss_pred ccc-----------EEecCCCCceEEEE-eccC---CEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEE
Confidence 312 23444444444443 4777 56666654 3459999998752 222232 23444566777
Q ss_pred EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecC
Q psy17688 235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQM 305 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~ 305 (349)
|+ ++.++++...++ ..++|.+...+.....+.. +.+.+..+.++|+++.++++.+ ..+.|++||+.++
T Consensus 371 ~~--~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 371 IA--GNRLFASYIHDA-KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EE--BTEEEEEEEETT-EEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EE--CCEEEEEEEECC-EEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 77 567888888888 5777766533555555554 3677899999999987444433 3578999998653
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.4e-11 Score=105.90 Aligned_cols=238 Identities=13% Similarity=0.062 Sum_probs=154.4
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--e
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--T 150 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~ 150 (349)
.....|+|+++++ ++++.. + .|++||.+++... ...... .... ++|++ +++.|+++..++ .
T Consensus 131 ~~P~~la~d~~g~-----lyv~d~~~~~I~~id~~~g~~~--~~~~~~------~~~~-ia~~~-~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-----VLAYQRDDPRVRLISVDDNKVT--TVHPGF------KGGK-PAVTK-DKQRVYSIGWEGTHT 195 (409)
T ss_dssp CCEEEEEECSTTE-----EEEEETTTTEEEEEETTTTEEE--EEEETC------CBCB-CEECT-TSSEEEEEBSSTTCE
T ss_pred CCceEEEEeCCCC-----EEEEecCCCcEEEEECCCCEEE--EeeccC------CCCc-eeEec-CCCcEEEEecCCCce
Confidence 3578999999987 777766 3 9999999875422 222221 1223 88887 888888888766 7
Q ss_pred EEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--eCCCC
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--EDPQH 227 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~ 227 (349)
|.+++...+.....+ ..+.. ....+.+++++|++ ..|+.+..++.|+.||..++....... .....
T Consensus 196 I~~~d~~~~~~~~~~--------g~~~~~~~~~p~~iav~p~~---g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~ 264 (409)
T 3hrp_A 196 VYVYMKASGWAPTRI--------GQLGSTFSGKIGAVALDETE---EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSL 264 (409)
T ss_dssp EEEEEGGGTTCEEEE--------EECCTTSCSCCCBCEECTTS---SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCC
T ss_pred EEEEEcCCCceeEEe--------eeccchhcCCcEEEEEeCCC---CeEEEEECCCcEEEEECCCCCEEEEecccccCCC
Confidence 888888765543111 11112 44567899999954 345557778899999998765322200 11111
Q ss_pred Cc--eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC---------------cceEEEEEeeCCCCEEEE
Q psy17688 228 TP--LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR---------------ACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 228 ~~--v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~~l~~ 290 (349)
.. ...++|+|.++.++++-..++ .|+.|+... . +..+.++. .....++++|+|.. +++
T Consensus 265 ~~~P~~~ia~~p~~g~lyv~d~~~~-~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-yva 339 (409)
T 3hrp_A 265 GTNPGPYLIYYFVDSNFYMSDQNLS-SVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-YIV 339 (409)
T ss_dssp CCSSCCEEEEETTTTEEEEEETTTT-EEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-EEE
T ss_pred CCCccccEEEeCCCCEEEEEeCCCC-EEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-EEE
Confidence 11 239999994455555555566 699998763 2 33333322 34789999999985 777
Q ss_pred Ec-CCCcEEEEEeecCCCCCCCcEEEEecc---------------CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 291 AG-DDHQALIWDIQQMPRAIEDPILAYTAA---------------GGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 291 ~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
-. .++.|+.||+..+ .+..+.++ -....++++++++..+++-..+++|+.+.+
T Consensus 340 d~~~~~~I~~~~~~~G------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDG------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTCEEEEEETTTT------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCEEEEEECCCC------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 77 8899999996542 13333332 135789999999876666666788887753
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=4.7e-13 Score=112.56 Aligned_cols=177 Identities=8% Similarity=0.031 Sum_probs=127.8
Q ss_pred CeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchhh---eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 76 PTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRLE---CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
+++.+++++... ++++|+ +.+.+|+++....... ............. |+.++| +++.|+++ .++.|
T Consensus 39 ~~nlLais~~~g-----ll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSKS-----LFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETTTT-----EEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEE
T ss_pred cccEEEEcCCCC-----EEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcE
Confidence 689999999988 888887 4888899764320000 0000000011224 999999 77888888 88999
Q ss_pred EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688 152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL 231 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~ 231 (349)
++||+.+.... .....|..++.++.+.+ ..+++++.||.|.+||+.++.... ....|.
T Consensus 109 ~v~dv~sl~~~-----------~~~~~~~~~v~~i~~~~-----p~~av~~~dG~L~v~dl~~~~~~~------~~~~Vs 166 (388)
T 1xip_A 109 YSLDLEELSEF-----------RTVTSFEKPVFQLKNVN-----NTLVILNSVNDLSALDLRTKSTKQ------LAQNVT 166 (388)
T ss_dssp EEEESSSTTCE-----------EEEEECSSCEEEEEECS-----SEEEEEETTSEEEEEETTTCCEEE------EEESEE
T ss_pred EEEEchhhhcc-----------CccceeecceeeEEecC-----CCEEEEECCCCEEEEEccCCcccc------ccCCce
Confidence 99999876644 34556677788777654 248889999999999999766432 235799
Q ss_pred EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEe------e---cCCcceEEEEEeeCCCCEEEE
Q psy17688 232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARL------N---NHRACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~------~---~~~~~v~~~~~~p~~~~~l~~ 290 (349)
+++|+| +| ++.|..|| .+++|+... ... ..++ . +|...|.+|.|.+++.+ |++
T Consensus 167 ~v~WSp-kG--~~vg~~dg-~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f-lv~ 230 (388)
T 1xip_A 167 SFDVTN-SQ--LAVLLKDR-SFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF-LAV 230 (388)
T ss_dssp EEEECS-SE--EEEEETTS-CEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE-EEE
T ss_pred EEEEcC-Cc--eEEEEcCC-cEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeE-EEE
Confidence 999999 77 78899999 599998875 332 4444 2 36789999999999988 554
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.53 E-value=1.9e-10 Score=97.45 Aligned_cols=275 Identities=10% Similarity=-0.012 Sum_probs=160.7
Q ss_pred CCCceEEEEEeeecccCC---eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC------------
Q psy17688 34 PDKLFRLAIGSYVEEYNN---KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG------------ 98 (349)
Q Consensus 34 ~~~~~~la~g~~~~~~~g---~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~------------ 98 (349)
+++++ +.+... ...+ .|.+++.+ +++.... +...... .++++||++ .+..+.
T Consensus 30 ~~~~~-~yv~~~--~~~~~~~~v~v~D~~--t~~~~~~--i~~g~~p-~i~~spDg~-----~lyv~n~~~~~~~rg~~~ 96 (373)
T 2mad_H 30 ADGRR-SYINLP--AHHSAIIQQWVLDAG--SGSILGH--VNGGFLP-NPVAAHSGS-----EFALASTSFSRIAKGKRT 96 (373)
T ss_pred CCCCE-EEEeCC--cccCCccEEEEEECC--CCeEEEE--ecCCCCC-CeEECCCCC-----EEEEEeccccccccCCCC
Confidence 47774 554421 0122 67787665 4554432 2222233 999999998 444432
Q ss_pred CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeee-
Q psy17688 99 DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQ- 175 (349)
Q Consensus 99 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~- 175 (349)
+.|.+||..+.+..................-..+.|+| ++++|+++.. ++.|.++| .+++... .
T Consensus 97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~-----------~~ 163 (373)
T 2mad_H 97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDD-----------QL 163 (373)
T ss_pred CeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEe-----------EE
Confidence 37999999875432211111001000012234688998 9999888874 47899999 8887762 2
Q ss_pred eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee---CCCCCce-eEEEEeCCCCCeEEEEeeCCc
Q psy17688 176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE---DPQHTPL-LRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~~~v-~~~~~~~~~~~~l~~~~~d~~ 251 (349)
+. ... ++.+.|.+. ..+++.+.||.+.++|. +++....... .....++ ....+.+.++.++++ +..+
T Consensus 164 i~-~~~---~~~~~~~~~--~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~- 234 (373)
T 2mad_H 164 LS-SPT---CYHIHPGAP--STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSG- 234 (373)
T ss_pred cC-CCc---eEEEEeCCC--ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCc-
Confidence 21 111 244556653 57778889999999999 6654422110 0111222 335667733444444 4566
Q ss_pred EEEEEeccCCC-cceeEeec----------CCcceEEEEEeeCCCCEEEEEc---------CCCcEEEEEeecCCCCCCC
Q psy17688 252 EVIILDVRVPC-TPVARLNN----------HRACVNGIAWAPHSSCHICTAG---------DDHQALIWDIQQMPRAIED 311 (349)
Q Consensus 252 ~i~v~d~~~~~-~~~~~~~~----------~~~~v~~~~~~p~~~~~l~~~~---------~d~~v~iwd~~~~~~~~~~ 311 (349)
.+.+.|+.... ..+..+.. .......+.++|+++.++++.. ..+.|.++|+.+. +
T Consensus 235 ~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-----~ 309 (373)
T 2mad_H 235 KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-----Q 309 (373)
T ss_pred eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-----E
Confidence 59999986421 11222211 1122344788999988344332 1357999999873 3
Q ss_pred cEEEEeccCCceEEEEEcCCCC-ceEEEE-cCCeEEEeeC
Q psy17688 312 PILAYTAAGGEINQIQWGATQP-DWIAIC-YNKYLEVLRV 349 (349)
Q Consensus 312 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~v~vw~v 349 (349)
.+..+.. .....+++|+|+|+ .++++. .++.|.++++
T Consensus 310 vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 310 TSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred EEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 4455544 55689999999998 677766 4799999974
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=1e-12 Score=110.58 Aligned_cols=185 Identities=12% Similarity=0.072 Sum_probs=128.2
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS 206 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~ 206 (349)
.++..+++++ ...++++|+.+ .+.+|++........-....... .....+.. |+.++| ++ ++|+++ .++.
T Consensus 38 ~~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~---~~L~v~-~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HG---DQVLVS-TRNA 107 (388)
T ss_dssp SCCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ET---TEEEEE-ESSE
T ss_pred ccccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CC---CEEEEE-cCCc
Confidence 3578899987 88899999987 55669876554110000000011 12234666 999999 66 688888 8899
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
|++||+++........ .+..++.++.+.+ . -+++++.|| .+.+||+.. +.... +...|++++|||+|
T Consensus 108 l~v~dv~sl~~~~~~~--~~~~~v~~i~~~~-p--~~av~~~dG-~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG-- 174 (388)
T 1xip_A 108 LYSLDLEELSEFRTVT--SFEKPVFQLKNVN-N--TLVILNSVN-DLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEESSSTTCEEEEE--ECSSCEEEEEECS-S--EEEEEETTS-EEEEEETTT-CCEEE----EEESEEEEEECSSE--
T ss_pred EEEEEchhhhccCccc--eeecceeeEEecC-C--CEEEEECCC-CEEEEEccC-Ccccc----ccCCceEEEEcCCc--
Confidence 9999999876443332 2445678877765 2 288889999 699999986 43332 45689999999999
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCCCcEEEE------e---ccCCceEEEEEcCCCCceEEE
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIEDPILAY------T---AAGGEINQIQWGATQPDWIAI 338 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~~~ 338 (349)
++.|..||.+++|+....... +...+ . +|...|.++.|.+++.++++-
T Consensus 175 -~~vg~~dg~i~~~~~~~~~~~---~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 175 -LAVLLKDRSFQSFAWRNGEME---KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp -EEEEETTSCEEEEEEETTEEE---EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred -eEEEEcCCcEEEEcCCCcccc---ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 567888999999988763210 02233 2 367899999999999877663
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=2.3e-10 Score=95.37 Aligned_cols=230 Identities=11% Similarity=-0.029 Sum_probs=145.4
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEE
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRV 103 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~v 103 (349)
-.....|+| ++...+.++.. ++.|.+|+.+ +++.. .......+.++.|+|+++ ++++..+.|.+
T Consensus 50 ~~egp~~~~--~~~~l~~~d~~----~~~i~~~d~~--~~~~~---~~~~~~~v~~i~~~~dg~-----l~v~~~~gl~~ 113 (326)
T 2ghs_A 50 LGEGPTFDP--ASGTAWWFNIL----ERELHELHLA--SGRKT---VHALPFMGSALAKISDSK-----QLIASDDGLFL 113 (326)
T ss_dssp BEEEEEEET--TTTEEEEEEGG----GTEEEEEETT--TTEEE---EEECSSCEEEEEEEETTE-----EEEEETTEEEE
T ss_pred CCcCCeEeC--CCCEEEEEECC----CCEEEEEECC--CCcEE---EEECCCcceEEEEeCCCe-----EEEEECCCEEE
Confidence 346788998 75533556555 7888888764 33332 223456799999999997 77766558999
Q ss_pred EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688 104 WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVGRVNSVSGHVKTQLI 177 (349)
Q Consensus 104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
||..+++.. .... .........+.++.++| +++++++... .+.|..++ +++.. .+.
T Consensus 114 ~d~~~g~~~--~~~~-~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~------------~~~ 175 (326)
T 2ghs_A 114 RDTATGVLT--LHAE-LESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVT------------KLF 175 (326)
T ss_dssp EETTTCCEE--EEEC-SSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEE------------EEE
T ss_pred EECCCCcEE--EEee-CCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEE------------Eee
Confidence 998776532 1111 11111124578899998 7776665442 23455555 34332 122
Q ss_pred ccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECC--CC-Cce--eeeee-CCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 178 AHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLR--HL-EHS--TIIYE-DPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~-~~~--~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
.+......++|+|++ +.+ ++.+.++.|.+||+. ++ +.. ..+.. ......+..+++++ ++.+.++...++
T Consensus 176 ~~~~~~~~i~~s~dg---~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~ 251 (326)
T 2ghs_A 176 ADISIPNSICFSPDG---TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEG 251 (326)
T ss_dssp EEESSEEEEEECTTS---CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTT
T ss_pred CCCcccCCeEEcCCC---CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCC
Confidence 233456789999998 554 555667899999986 44 211 12211 12234567899998 777666655566
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEEcCC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAGDD 294 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~d 294 (349)
.|.+||.. ++.+..+..+...+++++|+ |++..++++...+
T Consensus 252 -~v~~~d~~--g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 252 -AVDRYDTD--GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -EEEEECTT--CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -EEEEECCC--CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 59999983 56667777666789999998 8888744555444
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=2.3e-11 Score=101.98 Aligned_cols=282 Identities=13% Similarity=0.079 Sum_probs=169.0
Q ss_pred CccccceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEecC------CCC
Q psy17688 9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTIDH------PYP 76 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~ 76 (349)
+....+.+..+....... +++|| ||++ |.++..- ++.++.|.+|+.. +.+.......+. ...
T Consensus 65 D~~t~~v~~~I~vG~~P~-va~sp--DG~~-lyVan~~~~r~~~G~~~~~VsviD~~--t~~v~~~I~v~~g~r~~~g~~ 138 (386)
T 3sjl_D 65 DGEAGRVIGMIDGGFLPN-PVVAD--DGSF-IAHASTVFSRIARGERTDYVEVFDPV--TLLPTADIELPDAPRFLVGTY 138 (386)
T ss_dssp ETTTTEEEEEEEECSSCE-EEECT--TSSC-EEEEEEEEEETTEEEEEEEEEEECTT--TCCEEEEEEETTCCCCCBSCC
T ss_pred ECCCCeEEEEEECCCCCc-EEECC--CCCE-EEEEcccccccccCCCCCEEEEEECC--CCeEEEEEECCCccccccCCC
Confidence 444555566666664444 99998 9996 6655410 0125779999765 444444333322 225
Q ss_pred eeEEEEecCCCCCCCcEEEEe-C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE
Q psy17688 77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI 153 (349)
Q Consensus 77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i 153 (349)
...+.++||++. ++++. . + .|.++|+.+.+... .+... .. ...+ |.....+++.+.||.+.+
T Consensus 139 P~~~a~spDGk~----lyVan~~~~~~VsVID~~t~~vv~--tI~v~-------g~-~~~~-P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 139 PWMTSLTPDGKT----LLFYQFSPAPAVGVVDLEGKAFKR--MLDVP-------DC-YHIF-PTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp GGGEEECTTSSE----EEEEECSSSCEEEEEETTTTEEEE--EEECC-------SE-EEEE-EEETTEEEEEETTSCEEE
T ss_pred CceEEEcCCCCE----EEEEEcCCCCeEEEEECCCCcEEE--EEECC-------Cc-ceee-cCCCceeEEECCCCCEEE
Confidence 678999999984 34443 2 3 89999999875322 11110 11 1223 435667888899999999
Q ss_pred EeccC-cceeeeecccCCceeeeeeccCCcee-eEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCce--eeee--e---
Q psy17688 154 WCLET-NQVVGRVNSVSGHVKTQLIAHDKEVY-DIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIY--E--- 223 (349)
Q Consensus 154 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~--~--- 223 (349)
.++.+ ++..... . ..+.....++. ...|. +++ +++ ..+.+|.|.+.|+.+.... .... .
T Consensus 204 v~~~~~g~v~~~~---~----~~~~~~~~~~~~~~~~~~~dG---~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 204 VAFGTEGTPEITH---T----EVFHPEDEFLINHPAYSQKAG---RLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EECCSSSCCEEEE---C----CCCSCTTSCBCSCCEEETTTT---EEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EECCCCCeEEEee---c----ceeccccccccccceeEcCCC---cEE-EEeCCCEEEEEECCCCcceeecceecccccc
Confidence 99876 4442100 0 01111112222 24664 555 444 4666899999999865421 1111 0
Q ss_pred ---CCCCCceeEEEEeCCCCCeEEEEeeC---------CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEE-
Q psy17688 224 ---DPQHTPLLRLAWNKQDPNYLAMVAMN---------ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICT- 290 (349)
Q Consensus 224 ---~~~~~~v~~~~~~~~~~~~l~~~~~d---------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~- 290 (349)
.-.......++++| ++..+++...+ ++.|.++|+.+ .+.+.++.. ...+..|.++|+++.+|++
T Consensus 273 ~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred ccccccCCCcceeeECC-CCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence 00113345678898 77777776431 12699999998 777777754 2478899999999732544
Q ss_pred EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688 291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT 331 (349)
Q Consensus 291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 331 (349)
...++.|.++|..+ .+.+..+.. .+.-+.+.+++|
T Consensus 350 n~~~~~VsViD~~t-----~k~~~~i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 350 STGDKTLYIHDAES-----GEELRSVNQ-LGHGPQVITTAD 384 (386)
T ss_dssp ETTTTEEEEEETTT-----CCEEEEECC-CCSSCCEEEECC
T ss_pred cCCCCeEEEEECCC-----CcEEEEecC-CCCCceeEECCc
Confidence 55689999999988 344555555 444556666665
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=2.6e-10 Score=93.66 Aligned_cols=234 Identities=10% Similarity=-0.039 Sum_probs=155.3
Q ss_pred CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
...+.++.+.+++. +.++.. + .|.+|+.. ++... .... .....+.++++.+ ++.++++...++.|
T Consensus 19 ~~~p~~i~~d~~g~-----l~v~~~~~~~v~~~~~~-~~~~~-~~~~-----~~~~~~~~i~~~~-~g~l~v~~~~~~~v 85 (300)
T 2qc5_A 19 DSGPYGITSSEDGK-----VWFTQHKANKISSLDQS-GRIKE-FEVP-----TPDAKVMCLIVSS-LGDIWFTENGANKI 85 (300)
T ss_dssp TCCEEEEEECTTSC-----EEEEETTTTEEEEECTT-SCEEE-EECS-----STTCCEEEEEECT-TSCEEEEETTTTEE
T ss_pred CCCcceeeECCCCC-----EEEEcCCCCeEEEECCC-CceEE-EECC-----CCCCcceeEEECC-CCCEEEEecCCCeE
Confidence 45788999999987 776664 4 89999987 43211 1111 1124678899886 77777776667899
Q ss_pred EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688 152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL 231 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~ 231 (349)
..+|.. ++... .........+.++++.+++ +++++...++.|..+|.. ++... .........+.
T Consensus 86 ~~~d~~-g~~~~----------~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~ 149 (300)
T 2qc5_A 86 GKLSKK-GGFTE----------YPLPQPDSGPYGITEGLNG---DIWFTQLNGDRIGKLTAD-GTIYE-YDLPNKGSYPA 149 (300)
T ss_dssp EEECTT-SCEEE----------EECSSTTCCEEEEEECSTT---CEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEE
T ss_pred EEECCC-CCeEE----------ecCCCCCCCCccceECCCC---CEEEEccCCCeEEEECCC-CCEEE-ccCCCCCCCce
Confidence 999987 44321 1122233568899999988 788877778899999987 44332 22222345688
Q ss_pred EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688 232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE 310 (349)
Q Consensus 232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 310 (349)
.+++++ +++++++...++ .|..+|.. +.... ....+...+..+.+++++.. +++....+.|.+||... .
T Consensus 150 ~i~~d~-~g~l~v~~~~~~-~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~~~~~g-~---- 219 (300)
T 2qc5_A 150 FITLGS-DNALWFTENQNN-SIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGAL-WFVEIMGNKIGRITTTG-E---- 219 (300)
T ss_dssp EEEECT-TSSEEEEETTTT-EEEEECTT--CCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECTTC-C----
T ss_pred eEEECC-CCCEEEEecCCC-eEEEECCC--CcEEEeeCCCCCCCcceEEECCCCCE-EEEccCCCEEEEEcCCC-c----
Confidence 999999 777666555566 59999983 33322 12233456889999999865 66666677899998732 1
Q ss_pred CcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 311 DPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 311 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
...+ ..+...+.++++++++..+++...++.|..|+
T Consensus 220 --~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 220 --ISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp --EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred --EEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 1222 22345788999999997444444568888775
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=7.8e-12 Score=101.45 Aligned_cols=181 Identities=12% Similarity=0.014 Sum_probs=134.8
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE 216 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 216 (349)
.+++|++++.++.|.+||..+++.+. .+..+. ..+.++.+.|++ ++++ +.++.|+.||. +++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-----------~~~~~~~~~~~~~~~~pdG---~ilv--s~~~~V~~~d~-~G~ 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW-----------EYPLEKGWECNSVAATKAG---EILF--SYSKGAKMITR-DGR 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE-----------EEECCTTCCCCEEEECTTS---CEEE--ECBSEEEEECT-TSC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE-----------EeCCCccCCCcCeEECCCC---CEEE--eCCCCEEEECC-CCC
Confidence 46789999999999999999999884 444444 468899999999 7887 45778999999 666
Q ss_pred ceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEeec------CCcceEEEEEeeCCCCEEE
Q psy17688 217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARLNN------HRACVNGIAWAPHSSCHIC 289 (349)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~------~~~~v~~~~~~p~~~~~l~ 289 (349)
....... .....+.++.+.| +++++++.+. ++ .+..+|.. ++.+.++.. +......+.+.++|.+ ++
T Consensus 67 ~~W~~~~-~~~~~~~~~~~~~-dG~~lv~~~~~~~-~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-lv 140 (276)
T 3no2_A 67 ELWNIAA-PAGCEMQTARILP-DGNALVAWCGHPS-TILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNY-LV 140 (276)
T ss_dssp EEEEEEC-CTTCEEEEEEECT-TSCEEEEEESTTE-EEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCE-EE
T ss_pred EEEEEcC-CCCccccccEECC-CCCEEEEecCCCC-EEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCE-EE
Confidence 5444432 2335788899999 9999998887 66 47777753 666666542 2234556778999998 88
Q ss_pred EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 290 TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 290 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
+...++.|..||.+ ++ .+..+.. ...+.++...+++..+++++.+++|..++
T Consensus 141 ~~~~~~~v~~~d~~-G~-----~~w~~~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 141 PLFATSEVREIAPN-GQ-----LLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp EETTTTEEEEECTT-SC-----EEEEEEC-SSCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred EecCCCEEEEECCC-CC-----EEEEEEC-CCCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence 99999999999986 33 3556665 34567788899998777777777887775
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=1.6e-10 Score=96.85 Aligned_cols=281 Identities=12% Similarity=0.041 Sum_probs=164.9
Q ss_pred ecCCCceEEEEEeee-cccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----------CC
Q psy17688 32 VRPDKLFRLAIGSYV-EEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----------GD 99 (349)
Q Consensus 32 p~~~~~~~la~g~~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----------~~ 99 (349)
|.++++. +.+.... ...++.|.+++.. +++.......+.. + . ++++||++. ++++. ++
T Consensus 40 ~~pd~~~-vyV~~~~~~~~~~~V~ViD~~--t~~v~~~I~vG~~-P-~-va~spDG~~----lyVan~~~~r~~~G~~~~ 109 (386)
T 3sjl_D 40 PAPDARR-VYVNDPAHFAAVTQQFVIDGE--AGRVIGMIDGGFL-P-N-PVVADDGSF----IAHASTVFSRIARGERTD 109 (386)
T ss_dssp CCCCTTE-EEEEECGGGCSSEEEEEEETT--TTEEEEEEEECSS-C-E-EEECTTSSC----EEEEEEEEEETTEEEEEE
T ss_pred cCCCCCE-EEEEcCcccCCCCEEEEEECC--CCeEEEEEECCCC-C-c-EEECCCCCE----EEEEcccccccccCCCCC
Confidence 3348884 6666441 0124678888664 4555544333322 3 4 999999985 33433 13
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLI 177 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
.|.+||..+.+..................-..+.|+| ++++++++.. ++.|.++|+.+++.+.+ +.
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~t-----------I~ 177 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRM-----------LD 177 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEE-----------EE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEE-----------EE
Confidence 8999999887533222111101000112344688998 8998888764 68999999999988743 22
Q ss_pred ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeee--CCCCCce-eEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYE--DPQHTPL-LRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~--~~~~~~v-~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
.. + . ....|.+. +.+++.+.||.+.+.++.. ++....... .....++ ....|.+.++++++ .+.++ .|
T Consensus 178 v~-g-~--~~~~P~g~--~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g-~V 249 (386)
T 3sjl_D 178 VP-D-C--YHIFPTAP--DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTG-KI 249 (386)
T ss_dssp CC-S-E--EEEEEEET--TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTS-EE
T ss_pred CC-C-c--ceeecCCC--ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCC-EE
Confidence 11 1 1 12234432 5777888899999999876 443211100 0111223 23566542665554 55577 69
Q ss_pred EEEeccCCC-cceeEee---------c-CCcceEEEEEeeCCCCEEEEEcC----------CCcEEEEEeecCCCCCCCc
Q psy17688 254 IILDVRVPC-TPVARLN---------N-HRACVNGIAWAPHSSCHICTAGD----------DHQALIWDIQQMPRAIEDP 312 (349)
Q Consensus 254 ~v~d~~~~~-~~~~~~~---------~-~~~~v~~~~~~p~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~ 312 (349)
++.|+.... ..+..+. + ..+....+.++|+++. ++.... .+.|.+.|+.+. +.
T Consensus 250 ~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~-lyV~~~~~~~~~hk~~~~~V~viD~~t~-----kv 323 (386)
T 3sjl_D 250 HQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR-IYLLVDQRDEWRHKTASRFVVVLDAKTG-----ER 323 (386)
T ss_dssp EEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE-EEEEEEECCTTCTTSCEEEEEEEETTTC-----CE
T ss_pred EEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe-EEEEeccccccccCCCCCEEEEEECCCC-----eE
Confidence 999997522 1222221 0 1123345777999888 444322 246888999883 34
Q ss_pred EEEEeccCCceEEEEEcCCCC-ceEEEEc-CCeEEEeeC
Q psy17688 313 ILAYTAAGGEINQIQWGATQP-DWIAICY-NKYLEVLRV 349 (349)
Q Consensus 313 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~-d~~v~vw~v 349 (349)
+..+.. ...+.+++++++++ .|+++.. ++.|.+++.
T Consensus 324 ~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 324 LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 555554 45788999999986 5666655 799999874
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=2e-10 Score=98.04 Aligned_cols=280 Identities=12% Similarity=0.022 Sum_probs=166.0
Q ss_pred CCCceEEEEEeeecccC-CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe----------C-CcE
Q psy17688 34 PDKLFRLAIGSYVEEYN-NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS----------G-DYL 101 (349)
Q Consensus 34 ~~~~~~la~g~~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~----------~-~~i 101 (349)
++++. +.+........ +.|.++|.. +++.......+. .+ .+.++||++. ++++. . +.|
T Consensus 82 ~~~~~-vyV~n~~~~~~~~~VsVID~~--t~~vv~~I~vG~-~P--gia~SpDgk~----lyVan~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 82 PDARR-VYIQDPAHFAAITQQFVIDGS--TGRILGMTDGGF-LP--HPVAAEDGSF----FAQASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCTTE-EEEEECTTTCSSEEEEEEETT--TTEEEEEEEECS-SC--EEEECTTSSC----EEEEEEEEEETTEEEEEEEE
T ss_pred CCCCE-EEEECCCcCCCCCeEEEEECC--CCEEEEEEECCC-CC--ceEECCCCCE----EEEEeccccccccCCCCCEE
Confidence 57773 55554310001 788888765 455554443343 23 8999999985 44443 1 389
Q ss_pred EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688 102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.++|..+.+......+.+............+.|+| ++++++++.. ++.|.+.|+.+.+.+.. +.--
T Consensus 152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~-----------I~v~ 219 (426)
T 3c75_H 152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRM-----------LDVP 219 (426)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEE-----------EECC
T ss_pred EEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEE-----------EEcC
Confidence 99999887533222221011000012234678888 8998888874 57899999999988743 2211
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--eCCCCCc-eeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--EDPQHTP-LLRLAWNKQDPNYLAMVAMNACEVIIL 256 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~~i~v~ 256 (349)
. . ....|++. ..+++.+.||.+.+.++.+++...... ......+ ...+.+.+ ++..++.....+ .+.+.
T Consensus 220 -g-~--~~~~p~g~--~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g-~V~Vi 291 (426)
T 3c75_H 220 -D-C--YHIFPASP--TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTG-KIFQA 291 (426)
T ss_dssp -S-E--EEEEEEET--TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTS-EEEEE
T ss_pred -C-c--eeeccCCC--cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCC-cEEEE
Confidence 1 1 23345442 566677778888888885444321110 0011122 23456788 667666667777 69999
Q ss_pred eccCCCc-ceeEeec----------CCcceEEEEEeeCCCCEEEEEc---------CCCcEEEEEeecCCCCCCCcEEEE
Q psy17688 257 DVRVPCT-PVARLNN----------HRACVNGIAWAPHSSCHICTAG---------DDHQALIWDIQQMPRAIEDPILAY 316 (349)
Q Consensus 257 d~~~~~~-~~~~~~~----------~~~~v~~~~~~p~~~~~l~~~~---------~d~~v~iwd~~~~~~~~~~~~~~~ 316 (349)
|+..... .+..+.. .......+.++|+++.++++.. ..+.|.+.|+.+. +.+..+
T Consensus 292 D~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-----kvv~~I 366 (426)
T 3c75_H 292 DLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-----ERINKI 366 (426)
T ss_dssp EECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-----CEEEEE
T ss_pred eccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC-----eEEEEE
Confidence 9864211 1111110 0111223689999988444432 1357999999884 345555
Q ss_pred eccCCceEEEEEcCCCC-ceEEEEc-CCeEEEeeC
Q psy17688 317 TAAGGEINQIQWGATQP-DWIAICY-NKYLEVLRV 349 (349)
Q Consensus 317 ~~~~~~v~~~~~~~~~~-~l~~~~~-d~~v~vw~v 349 (349)
.. .....++.|+|+++ .++++.. ++.|.|+++
T Consensus 367 ~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 367 EL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred EC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 54 44688999999998 7888884 899999874
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.45 E-value=4.9e-10 Score=94.86 Aligned_cols=257 Identities=9% Similarity=-0.061 Sum_probs=152.6
Q ss_pred cceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec------CCCCeeEE
Q psy17688 13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID------HPYPTTKI 80 (349)
Q Consensus 13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~v~~~ 80 (349)
.+.+..+...... .++||| ||++ |.++... +..++.|.+|+.. +.+........ +......+
T Consensus 57 ~~~~~~i~~g~~p-~i~~sp--Dg~~-lyv~n~~~~~~~rg~~~~~v~viD~~--t~~~~~~i~~~~~~~~~~g~~p~~~ 130 (373)
T 2mad_H 57 GSILGHVNGGFLP-NPVAAH--SGSE-FALASTSFSRIAKGKRTDYVEVFDPV--TFLPIADIELPDAPRFDVGPYSWMN 130 (373)
T ss_pred CeEEEEecCCCCC-CeEECC--CCCE-EEEEeccccccccCCCCCeEEEEECC--CCcEEEEEECCCccccccCCCccce
Confidence 3444445444444 899998 9996 7766420 0125789999775 33333222111 11235689
Q ss_pred EEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688 81 MWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC 155 (349)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd 155 (349)
.|+||++ .|..++ + .|.++| .+.+.. .. .... . ++.+.|.....+++.+.||.+.++|
T Consensus 131 ~~spDG~-----~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~~------~---~~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 131 ANTPNNA-----DLLFFQFAAGPAVGLVV-QGGSSD--DQLLSSP------T---CYHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred EECCCCC-----EEEEEecCCCCeEEEEE-CCCCEE--eEEcCCC------c---eEEEEeCCCceEEEEcCCCCEEEEE
Confidence 9999998 444432 3 899999 776421 11 1110 1 1333343456777888899999999
Q ss_pred ccCcceeeeecccCCceeeeeeccCCc-eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeC--------
Q psy17688 156 LETNQVVGRVNSVSGHVKTQLIAHDKE-VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYED-------- 224 (349)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~-------- 224 (349)
. +++........ ..+ ....+ .....+.+++ ..++..+..+.+.+.|+....... .+...
T Consensus 194 ~-~g~~~~~~~~~-----~~~-~~~~p~~~~~~~~~~~---~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~ 263 (373)
T 2mad_H 194 H-AGGAAGAGLVG-----AML-TAAQNLLTQPAQANKS---GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADT 263 (373)
T ss_pred C-CCcEEEEEecc-----ccc-cCCcceeecceeEecC---CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccc
Confidence 9 77665211000 001 11112 1234566665 344444477899999997643211 11000
Q ss_pred CCCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-C
Q psy17688 225 PQHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-D 293 (349)
Q Consensus 225 ~~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~ 293 (349)
........++++| ++..++++.. .+ .|.++|..+ .+.+.++.. .....++.|+|||+.+++++. .
T Consensus 264 ~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~-~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~ 339 (373)
T 2mad_H 264 WRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAK-EVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAG 339 (373)
T ss_pred eecCceEeEEECC-CCCEEEEEeccCCcccccCCCC-eEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCC
Confidence 0112344578899 7777776543 24 599999987 777777754 346899999999994377766 5
Q ss_pred CCcEEEEEeecCC
Q psy17688 294 DHQALIWDIQQMP 306 (349)
Q Consensus 294 d~~v~iwd~~~~~ 306 (349)
++.|.++|+.+.+
T Consensus 340 ~~~V~ViD~~t~~ 352 (373)
T 2mad_H 340 TEVLHIYDAGAGD 352 (373)
T ss_pred CCeEEEEECCCCC
Confidence 8999999999843
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=1.5e-11 Score=103.26 Aligned_cols=274 Identities=9% Similarity=-0.004 Sum_probs=164.5
Q ss_pred ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-----eEecCCCCeeEEEEecCCCC
Q psy17688 14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-----STIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~ 88 (349)
+.+..+. ..+..++++| +|+. +++...- .++.+.||.++ .+++... ....+-..+..+++.++++
T Consensus 10 ~~v~~~~--~~p~~va~~~--~g~~-~v~~~~~--~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~- 79 (343)
T 2qe8_A 10 EVVAELS--LAPGNITLTP--DGRL-FLSLHQF--YQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI- 79 (343)
T ss_dssp EEEEEES--SCEEEEEECT--TSCE-EEEECGG--GCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-
T ss_pred EEEEEcC--CCcceEEECC--CCCE-EEEeCCC--CCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-
Confidence 4455554 5788999998 9984 5554320 12336677665 3433211 0112446799999999986
Q ss_pred CCCcEEEEe-C-----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE---cCCeEEEEeccC
Q psy17688 89 VFPDLLATS-G-----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS---IDTTCTIWCLET 158 (349)
Q Consensus 89 ~~~~~l~~~-~-----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~ 158 (349)
++++- + + .|.+||+.+++......+... .......+..+++++..+..+++-. .++.|.+||+.+
T Consensus 80 ----L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 80 ----VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp ----EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred ----EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 66543 2 3 899999987652211111111 1112235678889863444555555 678999999988
Q ss_pred cceeeeecccCCceeeeeeccCCcee-eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688 159 NQVVGRVNSVSGHVKTQLIAHDKEVY-DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK 237 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 237 (349)
++.. ..+.+|..... ...+.+++ ..+.+.+.++.++.|. ..+..++|+|
T Consensus 155 g~~~-----------r~~~~~~~~~~~~~~~~~~g---~~~~~~~~~g~~~~~~----------------~~~~gia~s~ 204 (343)
T 2qe8_A 155 GLAA-----------RVLQGYPGIAPEDIDLVIDG---VPVQIGQPDGTVIRPH----------------LGVNGIVLDA 204 (343)
T ss_dssp CCEE-----------EECTTCTTTSCCSCCCEETT---EECBEECTTSCEECCC----------------CCEEEEEECT
T ss_pred CCEE-----------EEecCCCcccccccceeECC---EEEEeccCCCceecee----------------cccceeEecc
Confidence 7765 23333322111 14455566 6777777777775542 2357899999
Q ss_pred CCCCeEEEEeeCCcEEEEEeccC--CC-----ccee--EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688 238 QDPNYLAMVAMNACEVIILDVRV--PC-----TPVA--RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA 308 (349)
Q Consensus 238 ~~~~~l~~~~~d~~~i~v~d~~~--~~-----~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~ 308 (349)
+++.|+++...+..+..++... .. +... ...++.+....++++++|.. +++...++.|.+||...++
T Consensus 205 -dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l-~va~~~~~~V~~~d~~~G~-- 280 (343)
T 2qe8_A 205 -ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNI-YVGDLAHSAIGVITSADRA-- 280 (343)
T ss_dssp -TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCE-EEEEGGGTEEEEEETTTTE--
T ss_pred -CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCE-EEEccCCCeEEEEECCCCC--
Confidence 8888888887764465555421 00 0011 12234455678999999876 8888888999999983321
Q ss_pred CCCcEEEEec-cCCceEEEEEcCCCCceEEEE
Q psy17688 309 IEDPILAYTA-AGGEINQIQWGATQPDWIAIC 339 (349)
Q Consensus 309 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 339 (349)
....... +...+.+++|.+++..+++.+
T Consensus 281 ---~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 281 ---YKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp ---EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred ---EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 1111221 245688999999987555554
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.44 E-value=4.9e-11 Score=109.76 Aligned_cols=240 Identities=12% Similarity=0.082 Sum_probs=147.7
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEE-----eCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLAT-----SGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS 145 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~-----~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (349)
+...+..++||||++ +||- |++ .|++||+++++.... .+.. .....++|+ +++.|+.+
T Consensus 127 ~~~~l~~~~~SpDg~-----~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~-------~k~~~~~Ws--Dg~~l~y~ 191 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR-----ILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD-------VKFSGISWL--GNEGFFYS 191 (693)
T ss_dssp SCCEEEEEEECTTSS-----EEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE-------EESCCCEEE--TTTEEEEE
T ss_pred CcEEEEEEEECCCCC-----EEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC-------ceeccEEEe--CCCEEEEE
Confidence 445688999999998 6663 444 899999998763211 1111 113467897 77778887
Q ss_pred EcCC-------------eEEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEE-EEc---CCCcE
Q psy17688 146 SIDT-------------TCTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFA-SVG---AEGSV 207 (349)
Q Consensus 146 ~~dg-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~-~~~---~d~~v 207 (349)
+.+. .|++|++.+..... ..+..... |...+..+.|+|++ ++|+ +.+ .+..|
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-------~~v~~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDD-------RLVFGAIPAQHHRYVGATVTEDD---RFLLISAANSTSGNRL 261 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGC-------EEEESCSGGGCCSEEEEEECTTS---CEEEEEEESSSSCCEE
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccc-------eEEEecCCCCCeEEEEEEEcCCC---CEEEEEEccCCCCcEE
Confidence 7764 39999988765320 00112222 34457889999999 5554 333 23589
Q ss_pred EEEECCCCC-ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC---CcEEEEEeccCCCc-ceeEeecCCcceEEEEEee
Q psy17688 208 RMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDVRVPCT-PVARLNNHRACVNGIAWAP 282 (349)
Q Consensus 208 ~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~p 282 (349)
+++|+.++. ....+. ......... |++.++.+++....+ + .|..+|+..... ....+..|...+. .|++
T Consensus 262 ~~~d~~~~~~~~~~l~--~~~~~~~~~-~~~~g~~l~~~t~~~~~~~-~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~ 335 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQ--GDLDADVSL-VDNKGSTLYLLTNRDAPNR-RLVTVDAANPGPAHWRDLIPERQQVL--TVHS 335 (693)
T ss_dssp EEEETTSTTCCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTCTTC-EEEEEETTSCCGGGCEEEECCCSSCE--EEEE
T ss_pred EEEECCCCCCceEEEe--CCCCceEEE-EeccCCEEEEEECCCCCCC-EEEEEeCCCCCccccEEEecCCCCEE--EEEE
Confidence 999998764 222222 122333333 566244455555443 4 599999986322 2355666666665 8999
Q ss_pred CCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEe-ccCCceEEEEEcCCCCceEEEEcC----CeEEEeeC
Q psy17688 283 HSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYT-AAGGEINQIQWGATQPDWIAICYN----KYLEVLRV 349 (349)
Q Consensus 283 ~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~v 349 (349)
+++.++++...++ .|++||+... ....+. ...+.+..+.++++++.++....+ +.+..|++
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~g~------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYEGK------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTSC------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred ECCEEEEEEEECCeeEEEEEECCCC------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 9998555555565 5788887642 122232 224567788888888877766554 67777763
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=1.2e-10 Score=95.76 Aligned_cols=199 Identities=14% Similarity=0.126 Sum_probs=128.9
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR 208 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~ 208 (349)
.-+..|++.++.++++...++.|..||..+++.. .+ .....+.+++++|++ +++++. ++.|.
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~------------~~-~~~~~~~~i~~~~dG---~l~v~~--~~~l~ 76 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ------------RV-TMDAPVSSVALRQSG---GYVATI--GTKFC 76 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE------------EE-ECSSCEEEEEEBTTS---SEEEEE--TTEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE------------EE-eCCCceEEEEECCCC---CEEEEE--CCeEE
Confidence 3467888755667777777899999999876553 12 234678999999998 655543 56899
Q ss_pred EEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeC---------CcEEEEEeccCCCcceeEeecCCcceEE
Q psy17688 209 MFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMN---------ACEVIILDVRVPCTPVARLNNHRACVNG 277 (349)
Q Consensus 209 iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d---------~~~i~v~d~~~~~~~~~~~~~~~~~v~~ 277 (349)
+||..+++........ .....+..++++| +++++++.... . .-.+|.+...+. +..+..+....+.
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~-~~~l~~~d~~g~-~~~~~~~~~~png 153 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERH-QGALYSLFPDHH-VKKYFDQVDISNG 153 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTT-CEEEEEECTTSC-EEEEEEEESBEEE
T ss_pred EEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCC-CcEEEEEECCCC-EEEEeeccccccc
Confidence 9999876543322211 1224578899999 88866654322 2 245555543233 2233333455789
Q ss_pred EEEeeCCCCEEEEEcCCCcEEEEEee--cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 278 IAWAPHSSCHICTAGDDHQALIWDIQ--QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 278 ~~~~p~~~~~l~~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
++|+|+++.++++.+.++.|.+||+. .+..........+..+......++++++|..+++...++.|.+|+
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 99999999856777778999999984 211100011122223345778999999997666666678888886
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=2.7e-10 Score=94.01 Aligned_cols=228 Identities=7% Similarity=-0.040 Sum_probs=144.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
.......|+| +|+..+.++.. ++.|..|+.+ ++... .......+..++++++++ ++++.. + .
T Consensus 45 ~~~egp~~~~--~g~~l~~~d~~----~~~i~~~~~~---g~~~~--~~~~~~~~~gl~~d~dG~-----l~v~~~~~~~ 108 (305)
T 3dr2_A 45 TWSEGPAWWE--AQRTLVWSDLV----GRRVLGWRED---GTVDV--LLDATAFTNGNAVDAQQR-----LVHCEHGRRA 108 (305)
T ss_dssp SSEEEEEEEG--GGTEEEEEETT----TTEEEEEETT---SCEEE--EEESCSCEEEEEECTTSC-----EEEEETTTTE
T ss_pred cCccCCeEeC--CCCEEEEEECC----CCEEEEEeCC---CCEEE--EeCCCCccceeeECCCCC-----EEEEECCCCE
Confidence 4566789998 88853566655 7889888652 33322 223556789999999997 777655 3 8
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEE----EEc-------------CCeEEEEeccCcceee
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGT----SSI-------------DTTCTIWCLETNQVVG 163 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~ 163 (349)
|.+|+.+ +.. ...... ........+.++.+++ ++.++++ |.. .+.|..+|..+++..
T Consensus 109 v~~~~~~-g~~--~~~~~~-~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~- 182 (305)
T 3dr2_A 109 ITRSDAD-GQA--HLLVGR-YAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ- 182 (305)
T ss_dssp EEEECTT-SCE--EEEECE-ETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-
T ss_pred EEEECCC-CCE--EEEEec-cCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-
Confidence 9999875 321 111111 1111113466788987 8888776 332 246777777666543
Q ss_pred eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------CcEEEEECCCCCce-eeeeeCCCCCceeEEEEe
Q psy17688 164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWN 236 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~ 236 (349)
. +. .....+.++|+|++ +.|+.+... +.|.+||+...... ..............++++
T Consensus 183 ----------~-~~-~~~~p~gl~~spdg---~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 183 ----------R-MA-DLDHPNGLAFSPDE---QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp ----------E-EE-EESSEEEEEECTTS---SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC
T ss_pred ----------E-Ee-cCCCCcceEEcCCC---CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC
Confidence 1 22 33456889999999 666666554 78999998764311 111111123445678999
Q ss_pred CCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC
Q psy17688 237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH 295 (349)
Q Consensus 237 ~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~ 295 (349)
+ +++ |.+++.++ |.+||.. ++.+..+..+. .+..++|+|+++. |..++.++
T Consensus 248 ~-~G~-lwv~~~~g--v~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~ 298 (305)
T 3dr2_A 248 R-GGW-LWSSSGTG--VCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQR-LFITGGPC 298 (305)
T ss_dssp T-TSC-EEECCSSE--EEEECTT--SCEEEEEECSS-CCCEEEECTTSCE-EEEEETTE
T ss_pred C-CCC-EEEecCCc--EEEECCC--CCEEEEEECCC-ceeEEEEeCCCCE-EEEEcCCe
Confidence 8 777 44444443 9999984 66666666554 5889999999887 55555554
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=2.8e-09 Score=90.14 Aligned_cols=233 Identities=9% Similarity=0.025 Sum_probs=139.8
Q ss_pred cCCCCCCCcEEEEeCC--cEEEEECCCCCch--hheeccC---CCCCCCcCceeEEEecCCCCCeEEEEEcC------Ce
Q psy17688 84 PDRKGVFPDLLATSGD--YLRVWRAGEPETR--LECILNN---NKNSDFCAPLTSFDWNEVDPNLLGTSSID------TT 150 (349)
Q Consensus 84 ~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~--~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~ 150 (349)
++++. +++++.. .|.++|+.+.... +....+. ....+. ..-..+...| ++ +++++..+ |.
T Consensus 93 ~~r~~----l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 93 IERRF----LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGP-DA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp CCSCE----EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECS-SC-EEEEEEEETTSCSCCE
T ss_pred ccCCE----EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECC-Ce-EEEEcCCCcCCCCCCe
Confidence 66652 4555553 9999999754221 1122210 000000 1222345556 77 77766655 78
Q ss_pred EEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEecCCCCccEEEEEc-------------------CCCcEEEE
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVG-------------------AEGSVRMF 210 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~-------------------~d~~v~iw 210 (349)
|.++|..+.+.+.+... .... .--.++.|+|++ +.+++.. .+.+|.+|
T Consensus 166 v~vlD~~T~~v~~~~~~---------~~~~~~~~Yd~~~~p~~---~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEI---------DRGDQYLAYDFWWNLPN---EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EEEECTTTCCEEEECCS---------BCTTCCCCCCEEEETTT---TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred EEEEECCCCeEEEEEcc---------CCCCccccceEEECCCC---CEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 99999999988743210 1111 224568899999 7887774 36899999
Q ss_pred ECCCCCceeeeeeCCCCCceeEEEE--eCCCCCeEEEEee-----CCcEEEEEeccCCCc--ceeE--eec---------
Q psy17688 211 DLRHLEHSTIIYEDPQHTPLLRLAW--NKQDPNYLAMVAM-----NACEVIILDVRVPCT--PVAR--LNN--------- 270 (349)
Q Consensus 211 d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~-----d~~~i~v~d~~~~~~--~~~~--~~~--------- 270 (349)
|+.+++....+...........+.| +| +++++++++. ..++|.+|.... +. .... +..
T Consensus 234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 234 DLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp ETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCG
T ss_pred ECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccc
Confidence 9998755544433212233455555 99 8888888886 544687766543 21 1111 000
Q ss_pred -------CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC--------------CceEEEEEc
Q psy17688 271 -------HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG--------------GEINQIQWG 329 (349)
Q Consensus 271 -------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~ 329 (349)
-......|.++|||+++.++.-..+.|.+||+..... .+.+....... +.-..++++
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~--~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS 389 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK--PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEIS 389 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS--CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEEC
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC--cEEEEEEEeCCeeccccccccccCCCCCCEEEEc
Confidence 0234788999999999666666789999999974221 11222222210 135889999
Q ss_pred CCCCceEEEE
Q psy17688 330 ATQPDWIAIC 339 (349)
Q Consensus 330 ~~~~~l~~~~ 339 (349)
|+|++|+++.
T Consensus 390 pDGk~LyVaN 399 (462)
T 2ece_A 390 RDGRRVYVTN 399 (462)
T ss_dssp TTSSEEEEEC
T ss_pred CCCCEEEEEc
Confidence 9999999887
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=8.7e-10 Score=91.84 Aligned_cols=196 Identities=7% Similarity=-0.050 Sum_probs=125.8
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR 208 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~ 208 (349)
..+..|+|..+.++++...++.|..||..+++.. .+. ....+.+++|+|++ +++++. .+ .|.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~------------~~~-~~~~v~~i~~~~dg---~l~v~~-~~-gl~ 112 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT------------VHA-LPFMGSALAKISDS---KQLIAS-DD-GLF 112 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE------------EEE-CSSCEEEEEEEETT---EEEEEE-TT-EEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE------------EEE-CCCcceEEEEeCCC---eEEEEE-CC-CEE
Confidence 3467888844667777777899999999876543 122 24578999999998 666654 33 499
Q ss_pred EEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeC------CcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688 209 MFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMN------ACEVIILDVRVPCTPVARLNNHRACVNGIAW 280 (349)
Q Consensus 209 iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~ 280 (349)
+||..+++........ .....+..++++| +++++++...+ + .|..++ . ++. ..+..+......++|
T Consensus 113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~-~l~~~~--~-g~~-~~~~~~~~~~~~i~~ 186 (326)
T 2ghs_A 113 LRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAG-SIYHVA--K-GKV-TKLFADISIPNSICF 186 (326)
T ss_dssp EEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCE-EEEEEE--T-TEE-EEEEEEESSEEEEEE
T ss_pred EEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCce-EEEEEe--C-CcE-EEeeCCCcccCCeEE
Confidence 9999876643322111 1124588999999 78766654332 3 355555 2 433 223233345688999
Q ss_pred eeCCCCEEEEEcCCCcEEEEEee--cC-CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 281 APHSSCHICTAGDDHQALIWDIQ--QM-PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~~v~iwd~~--~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
+|+++.++++.+.++.|.+||+. .+ ..........+......+.+++++++|..+++...++.|.+|+
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 99998745666678899999986 32 2111111222222345678899999997666665668888876
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=1.8e-09 Score=92.74 Aligned_cols=243 Identities=9% Similarity=0.037 Sum_probs=149.5
Q ss_pred ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--- 99 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--- 99 (349)
....++|+| ++++ +++... ++.|++|+.+ .+.+... ........ ++|+++++ .|+.+. +
T Consensus 132 ~P~~la~d~--~g~l-yv~d~~----~~~I~~id~~--~g~~~~~--~~~~~~~~-ia~~~~g~-----~l~~~d~~~~~ 194 (409)
T 3hrp_A 132 YMWGIAAVG--NNTV-LAYQRD----DPRVRLISVD--DNKVTTV--HPGFKGGK-PAVTKDKQ-----RVYSIGWEGTH 194 (409)
T ss_dssp CEEEEEECS--TTEE-EEEETT----TTEEEEEETT--TTEEEEE--EETCCBCB-CEECTTSS-----EEEEEBSSTTC
T ss_pred CceEEEEeC--CCCE-EEEecC----CCcEEEEECC--CCEEEEe--eccCCCCc-eeEecCCC-----cEEEEecCCCc
Confidence 577899997 8873 555544 7899999775 3333322 12233344 99999998 555544 2
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.|.+++...... ...+. .........+.+++++| +...|+.+..++.|..||..++..... .. ....++
T Consensus 195 ~I~~~d~~~~~~--~~~~g-~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~-~~------~~~~g~ 263 (409)
T 3hrp_A 195 TVYVYMKASGWA--PTRIG-QLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLI-KQ------LELSGS 263 (409)
T ss_dssp EEEEEEGGGTTC--EEEEE-ECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEE-EE------CCCCSC
T ss_pred eEEEEEcCCCce--eEEee-eccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEE-ec------ccccCC
Confidence 677777654421 11110 00000124567788987 445555577788999999987654310 00 001112
Q ss_pred CCce--eeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-------------CCCceeEEEEeCCCCCeEE
Q psy17688 180 DKEV--YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-------------QHTPLLRLAWNKQDPNYLA 244 (349)
Q Consensus 180 ~~~v--~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~ 244 (349)
...- ..++|+|++. .++++-..++.|+.||.... ...+.... .-.....++++| ++++++
T Consensus 264 ~~~~P~~~ia~~p~~g--~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyv 338 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDS--NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYI 338 (409)
T ss_dssp CCCSSCCEEEEETTTT--EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEE
T ss_pred CCCCccccEEEeCCCC--EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEE
Confidence 1111 3999999532 77777788899999998753 22221111 013478999999 788666
Q ss_pred EEe-eCCcEEEEEeccCCCcceeEeecC---------------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688 245 MVA-MNACEVIILDVRVPCTPVARLNNH---------------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303 (349)
Q Consensus 245 ~~~-~d~~~i~v~d~~~~~~~~~~~~~~---------------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~ 303 (349)
+-. .++ .|+.||+.. +. +.++.++ -.....++++|++.. +++-..+++|+.++++
T Consensus 339 ad~~~~~-~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l-yVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 339 VDGFKGY-CLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY-WIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EETTTTC-EEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE-EEEESTTCEEEEEEEC
T ss_pred EeCCCCC-EEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE-EEEECCCCeEEEEEeC
Confidence 666 667 699999754 43 4444443 235789999999765 7777778888887753
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=6.5e-10 Score=102.29 Aligned_cols=247 Identities=12% Similarity=0.099 Sum_probs=145.8
Q ss_pred CceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-- 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-- 99 (349)
..+..++||| ||++ ||.+.... .....|++++++ +++........ .....++|+ |++. ++.+..+
T Consensus 129 ~~l~~~~~Sp--Dg~~-lAy~~~~~G~~~~~i~v~dl~--tg~~~~~~~~~--~k~~~~~Ws-Dg~~----l~y~~~~~~ 196 (693)
T 3iuj_A 129 TALDQLSFSR--DGRI-LAYSLSLAGSDWREIHLMDVE--SKQPLETPLKD--VKFSGISWL-GNEG----FFYSSYDKP 196 (693)
T ss_dssp CEEEEEEECT--TSSE-EEEEEECSSCCEEEEEEEETT--TCSEEEEEEEE--EESCCCEEE-TTTE----EEEEESSCC
T ss_pred EEEEEEEECC--CCCE-EEEEEecCCCceEEEEEEECC--CCCCCccccCC--ceeccEEEe-CCCE----EEEEEecCc
Confidence 3577889998 9995 88765422 123568888775 45543321111 113577899 9883 3333323
Q ss_pred ------------cEEEEECCCCCchhheeccCCCCCC-CcCceeEEEecCCCCCeEEEEEc----CCeEEEEeccCccee
Q psy17688 100 ------------YLRVWRAGEPETRLECILNNNKNSD-FCAPLTSFDWNEVDPNLLGTSSI----DTTCTIWCLETNQVV 162 (349)
Q Consensus 100 ------------~i~vw~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~ 162 (349)
.|.+|++.+.......+.... . +...+.++.|+| ++++|+.... +..|.++|+.++...
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~---~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~ 272 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI---PAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAP 272 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCS---GGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecC---CCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence 399999987653322333221 1 123467889998 8887655433 258999999876421
Q ss_pred eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC---CcEEEEECCCCCc--eeeeeeCCCCCceeEEEEeC
Q psy17688 163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE---GSVRMFDLRHLEH--STIIYEDPQHTPLLRLAWNK 237 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~ 237 (349)
. ..+..+....... +++++. .+++....+ +.|..+|+.++.. ...+. .+...+. .|++
T Consensus 273 ~----------~~l~~~~~~~~~~-~~~~g~--~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~ 335 (693)
T 3iuj_A 273 L----------LTVQGDLDADVSL-VDNKGS--TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHS 335 (693)
T ss_dssp C----------EEEECSSSSCEEE-EEEETT--EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEE
T ss_pred e----------EEEeCCCCceEEE-EeccCC--EEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEE
Confidence 0 2344555555444 566662 555555544 6799999988654 12222 2333343 8888
Q ss_pred CCCCeEEEEe-eCCc-EEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcC---CCcEEEEEeecC
Q psy17688 238 QDPNYLAMVA-MNAC-EVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGD---DHQALIWDIQQM 305 (349)
Q Consensus 238 ~~~~~l~~~~-~d~~-~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~---d~~v~iwd~~~~ 305 (349)
+++.|+... .++. .|++||+.. .....+. ...+.+..+.++|+++.++++.+. -+.++.||+.+.
T Consensus 336 -~g~~lv~~~~~~g~~~l~~~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 336 -GSGYLFAEYMVDATARVEQFDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp -ETTEEEEEEEETTEEEEEEECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred -ECCEEEEEEEECCeeEEEEEECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 666665554 4441 378888863 3344443 244567788888998884444432 278888987653
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=2.2e-09 Score=88.48 Aligned_cols=229 Identities=10% Similarity=0.047 Sum_probs=144.7
Q ss_pred CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688 73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150 (349)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (349)
.........|+|+++. ++.+.. + .|..|+.. ++. . .+.... ..+..+.+++ +++++++...++.
T Consensus 43 ~~~~~egp~~~~~g~~----l~~~d~~~~~i~~~~~~-g~~--~-~~~~~~-----~~~~gl~~d~-dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRT----LVWSDLVGRRVLGWRED-GTV--D-VLLDAT-----AFTNGNAVDA-QQRLVHCEHGRRA 108 (305)
T ss_dssp CCSSEEEEEEEGGGTE----EEEEETTTTEEEEEETT-SCE--E-EEEESC-----SCEEEEEECT-TSCEEEEETTTTE
T ss_pred CCcCccCCeEeCCCCE----EEEEECCCCEEEEEeCC-CCE--E-EEeCCC-----CccceeeECC-CCCEEEEECCCCE
Confidence 4445778999999873 555555 3 89999874 321 1 122211 4578899987 7776665555678
Q ss_pred EEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEE----EcC-------------CCcEEEEEC
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFAS----VGA-------------EGSVRMFDL 212 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~----~~~-------------d~~v~iwd~ 212 (349)
|.+|+.. ++... + .....+ ....+++++++|++ +++++ |.. .+.|..+|.
T Consensus 109 v~~~~~~-g~~~~-~-------~~~~~~~~~~~~~~i~~d~dG---~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 109 ITRSDAD-GQAHL-L-------VGRYAGKRLNSPNDLIVARDG---AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEEECTT-SCEEE-E-------ECEETTEECSCCCCEEECTTS---CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEEECCC-CCEEE-E-------EeccCCCccCCCCCEEECCCC---CEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 9999986 44321 0 001111 12347789999998 67776 332 256888887
Q ss_pred CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC------CcEEEEEeccCCCccee---Ee-ecCCcceEEEEEee
Q psy17688 213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN------ACEVIILDVRVPCTPVA---RL-NNHRACVNGIAWAP 282 (349)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~~i~v~d~~~~~~~~~---~~-~~~~~~v~~~~~~p 282 (349)
.+++..... .......++|+| +++.|+++... + .|.+||+.. .. +. .+ ....+....+.+++
T Consensus 177 ~~g~~~~~~----~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~-~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~ 248 (305)
T 3dr2_A 177 DGSPLQRMA----DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSV-EITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDR 248 (305)
T ss_dssp SSCCCEEEE----EESSEEEEEECT-TSSEEEEEECCC---CCC-EEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECT
T ss_pred CCCcEEEEe----cCCCCcceEEcC-CCCEEEEEecCCcCCCCC-EEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECC
Confidence 666543332 124567899999 88877777665 5 599999875 22 21 11 11234456789999
Q ss_pred CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEE
Q psy17688 283 HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLE 345 (349)
Q Consensus 283 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 345 (349)
+|.. .++ +.+ .|.+||... +.+..+..+. .+.+++|.+++..|.+++.++..+
T Consensus 249 ~G~l-wv~-~~~-gv~~~~~~g------~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 249 GGWL-WSS-SGT-GVCVFDSDG------QLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp TSCE-EEC-CSS-EEEEECTTS------CEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCCE-EEe-cCC-cEEEECCCC------CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 9984 443 444 488998743 2345555533 688999999988788877764433
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.31 E-value=1.1e-09 Score=93.45 Aligned_cols=261 Identities=11% Similarity=0.032 Sum_probs=157.4
Q ss_pred CccccceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec------CCCC
Q psy17688 9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID------HPYP 76 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~ 76 (349)
++...+.+..+...... .++++| ||++ |.++... ++.++.|.++|.. +++.......+ ....
T Consensus 105 D~~t~~vv~~I~vG~~P-gia~Sp--Dgk~-lyVan~~~~~~~~G~~~~~VsviD~~--t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 105 DGSTGRILGMTDGGFLP-HPVAAE--DGSF-FAQASTVFERIARGKRTDYVEVFDPV--TFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp ETTTTEEEEEEEECSSC-EEEECT--TSSC-EEEEEEEEEETTEEEEEEEEEEECTT--TCCEEEEEEETTCCCCCBSCC
T ss_pred ECCCCEEEEEEECCCCC-ceEECC--CCCE-EEEEeccccccccCCCCCEEEEEECC--CCcEEEEEECCCccccccCCC
Confidence 34555666666666444 899998 9996 6666420 0125678888664 44444333332 1234
Q ss_pred eeEEEEecCCCCCCCcEEEEe-C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE
Q psy17688 77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI 153 (349)
Q Consensus 77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i 153 (349)
...+.++||++. ++++. . + .|.+.|+.+.+.... +... .. ....|.....+++.+.||.+.+
T Consensus 179 P~~~~~spDGk~----lyV~n~~~~~~VsVID~~t~kvv~~--I~v~-------g~--~~~~p~g~~~~v~~~~dG~~~~ 243 (426)
T 3c75_H 179 QWMNALTPDNKN----LLFYQFSPAPAVGVVDLEGKTFDRM--LDVP-------DC--YHIFPASPTVFYMNCRDGSLAR 243 (426)
T ss_dssp GGGSEECTTSSE----EEEEECSSSCEEEEEETTTTEEEEE--EECC-------SE--EEEEEEETTEEEEEETTSSEEE
T ss_pred cceEEEcCCCCE----EEEEecCCCCeEEEEECCCCeEEEE--EEcC-------Cc--eeeccCCCcEEEEEcCCCCEEE
Confidence 678899999983 33333 2 3 899999988653221 1110 11 1112323466777788888888
Q ss_pred EeccCcceeeeecccCCceeeeeeccCCce-eeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee--eeeC-C----
Q psy17688 154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEV-YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI--IYED-P---- 225 (349)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~-~---- 225 (349)
.++.+++...... ..+.....++ ..+.+.+++ ..++..+..+.+.+.|+........ .... .
T Consensus 244 V~~~~~~v~~~~~-------~~~~v~~~p~~~~~~~~~dg---~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 244 VDFADGETKVTNT-------EVFHTEDELLINHPAFSLRS---GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EECCTTCCEEEEC-------CCCSCTTSCBCSCCEECTTT---CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EECCCCcEEEEee-------eeeccCCCceeeEeeecCCC---CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 8885555431100 0111111121 235678887 5665666788999999976432110 0000 0
Q ss_pred ---CCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC-CEEEEE
Q psy17688 226 ---QHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS-CHICTA 291 (349)
Q Consensus 226 ---~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~~ 291 (349)
.......++++| ++..+++... .+ .|.++|..+ .+.+.++... .....+.|+|+++ . ++++
T Consensus 314 ~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s~-~VsVID~~T-~kvv~~I~vg-~~P~gia~spDg~~~-lyv~ 388 (426)
T 3c75_H 314 DDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAASR-FVVVLNAET-GERINKIELG-HEIDSINVSQDAEPL-LYAL 388 (426)
T ss_dssp GTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCEE-EEEEEETTT-CCEEEEEEEE-EEECEEEECCSSSCE-EEEE
T ss_pred cccccCCceeeEEcC-CCCEEEEEecccccccccCCCC-EEEEEECCC-CeEEEEEECC-CCcCeEEEccCCCEE-EEEE
Confidence 011223478999 7776666643 23 699999998 7777777642 3588999999999 6 6666
Q ss_pred c-CCCcEEEEEeecC
Q psy17688 292 G-DDHQALIWDIQQM 305 (349)
Q Consensus 292 ~-~d~~v~iwd~~~~ 305 (349)
. .++.|.++|+.+.
T Consensus 389 n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 389 SAGTQTLHIYDAATG 403 (426)
T ss_dssp ETTTTEEEEEETTTC
T ss_pred cCCCCeEEEEECCCC
Confidence 6 6999999999984
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.23 E-value=1.8e-09 Score=90.55 Aligned_cols=273 Identities=9% Similarity=-0.058 Sum_probs=160.3
Q ss_pred CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecC------CCC
Q psy17688 9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDH------PYP 76 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~ 76 (349)
+....+.+.++...... .+.|+| |+++ +.++.... ..++.|.+||.. +++.......+. ...
T Consensus 52 D~~t~~v~~~i~vG~~P-~i~~sp--Dg~~-lyVan~~~~r~~~G~~~~~VsviD~~--T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 52 CAGCGVTLGHSLGAFLS-LAVAGH--SGSD-FALASTSFARSAKGKRTDYVEVFDPV--TFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp ETTTTEEEEEEEECTTC-EEEECT--TSSC-EEEEEEEETTTTSSSEEEEEEEECTT--TCCEEEEEEETTSCSCCBSCC
T ss_pred ECCCCeEEEEEeCCCCC-ceEECC--CCCE-EEEEcccccccccCCCCCEEEEEECC--CCCEEEEEECCCccccccCCC
Confidence 45556777777777544 799998 9996 77664210 126789999775 445444433321 134
Q ss_pred eeEEEEecCCCCCCCcEEEEe-C-C-cEEE--EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688 77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRV--WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC 151 (349)
Q Consensus 77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~v--w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i 151 (349)
...+.++||++. ++++. + + .+.+ +|..+ ...+ ... .. ....|.....+++.+.||.+
T Consensus 126 P~~ia~SpDGk~----lyVan~~~~~~v~V~~iD~~t----v~~i-~v~------~~---~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 126 VHIIGNCASSAC----LLFFLFGSSAAAGLSVPGASD----DQLT-KSA------SC---FHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp TTSEEECTTSSC----EEEEECSSSCEEEEEETTTEE----EEEE-ECS------SC---CCCEEEETTEEECCCCTTSC
T ss_pred cceEEEcCCCCE----EEEEccCCCCeEEEEEEchhh----ceEE-ECC------Cc---eEEccCCCeEEEEEcCCCCE
Confidence 678999999984 33333 2 2 6777 88766 1111 110 01 11123244556667788888
Q ss_pred EEEeccC-----cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCC
Q psy17688 152 TIWCLET-----NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDP 225 (349)
Q Consensus 152 ~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~ 225 (349)
.+.|+.+ ++...... ..+.-...+. . .+++ ..++..+. +.+.+.|+......... ....
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t-------~~i~vg~~P~---~-~~~~---~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~ 252 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCT-------GAQNCSSQAA---Q-ANYP---GMLVWAVA-SSILQGDIPAAGATMKAAIDGN 252 (368)
T ss_dssp EEEECCSSCCCCEECCCCSC-------TTSCBCSCCE---E-ETTT---TEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred EEEECccccccCCeEEEEee-------eeeeCCCCcc---c-cccC---CEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence 8888876 33321000 0011112233 3 5555 45555555 89999999753211110 0000
Q ss_pred ---------CCCceeEEEEeCCCCCeEEEEee-C--------CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE
Q psy17688 226 ---------QHTPLLRLAWNKQDPNYLAMVAM-N--------ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH 287 (349)
Q Consensus 226 ---------~~~~v~~~~~~~~~~~~l~~~~~-d--------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 287 (349)
.......++++| ++..++++.. . + .+.++|+.+ .+.+.++.... ....+.|+|+|+.+
T Consensus 253 ~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~-~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l 328 (368)
T 1mda_H 253 ESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAE-NTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASD 328 (368)
T ss_dssp CTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEE-EEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCE
T ss_pred cccccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCC-CEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEE
Confidence 001122378999 7777776543 2 3 367999998 67777776533 68999999999976
Q ss_pred EEEEc-CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 288 ICTAG-DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 288 l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
+++.. .++.|.++|+.+. +.+..+.. ......+++.+
T Consensus 329 ~va~~~~~~~VsVID~~t~-----kvv~~I~v-g~~P~~i~~~~ 366 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASD-----QDQSSVEL-DKGPESLSVQN 366 (368)
T ss_dssp EEEEETTTTEEEEEESSSC-----EEEEECCC-CSCCCEEECCC
T ss_pred EEEccCCCCeEEEEECCCC-----cEEEEEEC-CCCCCEEEeec
Confidence 77777 5999999999983 33444544 44455666554
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.20 E-value=4.5e-08 Score=82.87 Aligned_cols=228 Identities=11% Similarity=0.072 Sum_probs=135.0
Q ss_pred CCCceEEEEEeeecccCCeEEEEeccccccccccceEec-------CC-CCeeEEEEecCCCCCCCcEEEEeC-C-----
Q psy17688 34 PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-------HP-YPTTKIMWIPDRKGVFPDLLATSG-D----- 99 (349)
Q Consensus 34 ~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-------~~-~~v~~~~~~~~~~~~~~~~l~~~~-~----- 99 (349)
.++++.++.|.. +++|.|++...+..+......+. .. .....+...|++ +++++. +
T Consensus 93 ~~r~~l~v~~l~----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG------i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVPGLR----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA------IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEEBTT----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC------EEEEEEEETTSCS
T ss_pred ccCCEEEEccCC----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe------EEEEcCCCcCCCC
Confidence 388874445544 89999999864434333333331 11 245667788988 444432 1
Q ss_pred --cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------------------cCCeEEEEeccC
Q psy17688 100 --YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------------------IDTTCTIWCLET 158 (349)
Q Consensus 100 --~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~ 158 (349)
.|.++|.++.+... ...... ....--..+-|+| +.+.+++.. ...+|.+||+.+
T Consensus 163 ~g~v~vlD~~T~~v~~--~~~~~~--~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 163 PGGILMLDHYSFEPLG--KWEIDR--GDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp CCEEEEECTTTCCEEE--ECCSBC--TTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred CCeEEEEECCCCeEEE--EEccCC--CCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 69999988765322 222111 0011123577788 888888774 368999999998
Q ss_pred cceeeeecccCCceeeeeec--cCCceeeEEE--ecCCCCccEEEEEc------CCCcEEEEECCCCCce--eeeeeCC-
Q psy17688 159 NQVVGRVNSVSGHVKTQLIA--HDKEVYDIAF--SRAGGGRDMFASVG------AEGSVRMFDLRHLEHS--TIIYEDP- 225 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~--~~~~~~~- 225 (349)
++... .+.. .......+.| +|++ ++++.++ .+++|.+|....++.. ..+....
T Consensus 238 ~k~~~-----------tI~vg~~g~~P~~i~f~~~Pdg---~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 238 RKRIH-----------SLTLGEENRMALELRPLHDPTK---LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE 303 (462)
T ss_dssp TEEEE-----------EEESCTTEEEEEEEEECSSTTC---CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE
T ss_pred CcEee-----------EEecCCCCCccceeEeeECCCC---CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc
Confidence 77663 2222 1123445555 9988 4555444 6778877666543211 1110000
Q ss_pred ---------------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC--cceeEeecCC--------------cc
Q psy17688 226 ---------------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC--TPVARLNNHR--------------AC 274 (349)
Q Consensus 226 ---------------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~--------------~~ 274 (349)
.......+.++| ++++|+++......|.+||+.... +.+..+.... +.
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred cccccccccccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 024478899999 999999888765589999986433 3333332210 13
Q ss_pred eEEEEEeeCCCCEEEEEc
Q psy17688 275 VNGIAWAPHSSCHICTAG 292 (349)
Q Consensus 275 v~~~~~~p~~~~~l~~~~ 292 (349)
-..+.++|+|++ |+++.
T Consensus 383 Pr~~~lSpDGk~-LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRR-VYVTN 399 (462)
T ss_dssp CCCEEECTTSSE-EEEEC
T ss_pred CCEEEEcCCCCE-EEEEc
Confidence 588999999999 55554
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.15 E-value=3.6e-08 Score=90.32 Aligned_cols=195 Identities=13% Similarity=0.143 Sum_probs=120.6
Q ss_pred EEEecCCCCCeEEEEEcCCe-------------------EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688 131 SFDWNEVDPNLLGTSSIDTT-------------------CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191 (349)
Q Consensus 131 ~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 191 (349)
.+.++| +.++++.+..++. |..+|..+++.+..++...... ..+. ...++.......+
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~-wd~~-~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA-WDYT-ATQHMILAELPID 315 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC-SCCC-CCSCEEEEEEEET
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc-cccc-CCCCcEEEeeccC
Confidence 467776 6788888887764 9999999999885432110000 0000 1111222222234
Q ss_pred CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-------------------------------------CCCceeEEE
Q psy17688 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-------------------------------------QHTPLLRLA 234 (349)
Q Consensus 192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------------------------------------~~~~v~~~~ 234 (349)
+.....++.++.+|.++++|.++++......... ....-..++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 4111378899999999999999987652221110 000112378
Q ss_pred EeCCCCCeEEEEee---------------------------------------------CCcEEEEEeccCCCcceeEee
Q psy17688 235 WNKQDPNYLAMVAM---------------------------------------------NACEVIILDVRVPCTPVARLN 269 (349)
Q Consensus 235 ~~~~~~~~l~~~~~---------------------------------------------d~~~i~v~d~~~~~~~~~~~~ 269 (349)
++| +..++++... ++ .|..||+.+ ++.+.++.
T Consensus 396 ~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g-~l~A~D~~t-G~~~W~~~ 472 (689)
T 1yiq_A 396 YNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSG-KLIAWDPVK-QQAAWEVP 472 (689)
T ss_dssp EET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEE-EEEEEETTT-TEEEEEEE
T ss_pred ECC-CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcce-eEEEEECCC-CCeEeEcc
Confidence 899 6667776533 25 599999987 78777776
Q ss_pred cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC-ceEEEEEcCCCCceEEE
Q psy17688 270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG-EINQIQWGATQPDWIAI 338 (349)
Q Consensus 270 ~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 338 (349)
.+. ++....+...+.. ++.++.||.++.||.+++ +.+..++...+ ...-+.|..+|+.+++.
T Consensus 473 ~~~-~~~~g~~~taggl-vf~gt~dg~l~a~D~~tG-----~~lw~~~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 473 YVT-IFNGGTLSTAGNL-VFEGSADGRVIAYAADTG-----EKLWEQPAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp ESS-SCCCCEEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCC-CccCccceECCCE-EEEECCCCcEEEEECCCC-----ccceeeeCCCCcccCceEEEECCEEEEEE
Confidence 543 3344466677776 888999999999999994 45666665322 22446777888755553
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=4.7e-08 Score=89.35 Aligned_cols=195 Identities=9% Similarity=0.096 Sum_probs=121.3
Q ss_pred EEEecCCCCCeEEEEEcCC-------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688 131 SFDWNEVDPNLLGTSSIDT-------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191 (349)
Q Consensus 131 ~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 191 (349)
.+.++| +.++++.+..++ .|..+|..+++....++...... ..+.. .....-+....+
T Consensus 247 ~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~-wd~~~-~~~p~l~~~~~d 323 (677)
T 1kb0_A 247 SMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN-WDYTS-TQPMILADIKIA 323 (677)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC-SCCCC-CSCCEEEEEEET
T ss_pred ceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc-ccccc-CCCcEEEecccC
Confidence 467777 677888777664 59999999999885432110000 00000 111222233334
Q ss_pred CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC---------CCce------------------------eEEEEeCC
Q psy17688 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ---------HTPL------------------------LRLAWNKQ 238 (349)
Q Consensus 192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~---------~~~v------------------------~~~~~~~~ 238 (349)
+.....++.++.+|.++++|.++++.......... ..++ ..++++|
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp- 402 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP- 402 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-
Confidence 41114788999999999999999876543322110 0011 2578899
Q ss_pred CCCeEEEEeeC-------------------------------------------CcEEEEEeccCCCcceeEeecCCcce
Q psy17688 239 DPNYLAMVAMN-------------------------------------------ACEVIILDVRVPCTPVARLNNHRACV 275 (349)
Q Consensus 239 ~~~~l~~~~~d-------------------------------------------~~~i~v~d~~~~~~~~~~~~~~~~~v 275 (349)
+..++++...+ + .|..||+.+ ++.+.++.. ..++
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g-~l~A~D~~t-G~~~W~~~~-~~~~ 479 (677)
T 1kb0_A 403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFG-RLLAWDPVA-QKAAWSVEH-VSPW 479 (677)
T ss_dssp TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEE-EEEEEETTT-TEEEEEEEE-SSSC
T ss_pred CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCcc-EEEEEeCCC-CcEEeecCC-CCCC
Confidence 77777775432 5 699999987 777777653 3445
Q ss_pred EEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcCCCCceEEE
Q psy17688 276 NGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGATQPDWIAI 338 (349)
Q Consensus 276 ~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~ 338 (349)
....+...+.. ++.++.||.+++||.++ .+.+..+.... ....-+.|..+|+.+++.
T Consensus 480 ~~g~~~~~g~~-v~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 480 NGGTLTTAGNV-VFQGTADGRLVAYHAAT-----GEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CCCEEEETTTE-EEEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred cCcceEeCCCE-EEEECCCCcEEEEECCC-----CceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 55667778887 78889999999999998 44566666422 223445667788755544
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.11 E-value=3.5e-11 Score=101.96 Aligned_cols=179 Identities=11% Similarity=0.005 Sum_probs=94.2
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH 217 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 217 (349)
++..+++++.||.|..||..+++...+ +.. +.+.+..+..++ ..+++++.|+.|+.||.++++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~-----------~~~--~~~~s~p~~~~g---~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWT-----------LKE--DPVLQVPTHVEE---PAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEE-----------EEC--CCSCCCC--------CCEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE-----------ecC--CCceecceEcCC---CEEEEeCCCCEEEEEECCCCce
Confidence 678899999999999999999998853 222 344444455556 6788889999999999988765
Q ss_pred eeeeeeCCCCCcee-EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688 218 STIIYEDPQHTPLL-RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296 (349)
Q Consensus 218 ~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~ 296 (349)
...... .....+. +.... .+..+++++.++ .++.||.++ ++.+..+..+. ...++|++.. +++++.|+.
T Consensus 72 ~w~~~~-~~~~~~~~sp~~~--~~~~v~~g~~dg-~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~-v~~~~~dg~ 141 (369)
T 2hz6_A 72 LTKLPF-TIPELVQASPCRS--SDGILYMGKKQD-IWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSL-LYLGRTEYT 141 (369)
T ss_dssp SEECSC-CHHHHHTTCSCC-------CCCCEEEE-EEEEECCC----------------------------EEEEEEEEE
T ss_pred eeeeec-cCccccccCceEe--cCCEEEEEeCCC-EEEEEECCC-CcEEEEecCCC----cccccccCCE-EEEEecCCE
Confidence 332211 0000110 11111 344677788888 699999997 77777766543 2456677777 888899999
Q ss_pred EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC---CceEEEEcCCeEEEeeC
Q psy17688 297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ---PDWIAICYNKYLEVLRV 349 (349)
Q Consensus 297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~vw~v 349 (349)
|+.||.++++. +..+..+. .....+.++. ..+++++.|+.|..|+.
T Consensus 142 v~a~d~~tG~~-----~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 142 ITMYDTKTREL-----RWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp EECCCSSSSSC-----CCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred EEEEECCCCCE-----EEeEeccc--ccCccccCCccccceEEEECCCCEEEEEEC
Confidence 99999988543 22222111 1223333321 45788888999988863
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=1.9e-08 Score=84.37 Aligned_cols=255 Identities=7% Similarity=-0.082 Sum_probs=144.8
Q ss_pred eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe---------C-C-cEEEEECCCCCchhheeccCC
Q psy17688 52 KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS---------G-D-YLRVWRAGEPETRLECILNNN 120 (349)
Q Consensus 52 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~---------~-~-~i~vw~~~~~~~~~~~~~~~~ 120 (349)
.|.++|.+ +++.+.....+.. + .+.++||++. ++++. . + .|.+||+.+.+......+.+.
T Consensus 47 ~vsvID~~--t~~v~~~i~vG~~-P--~i~~spDg~~----lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAG--CGVTLGHSLGAFL-S--LAVAGHSGSD----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETT--TTEEEEEEEECTT-C--EEEECTTSSC----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECC--CCeEEEEEeCCCC-C--ceEECCCCCE----EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence 67777554 5666555444443 4 7999999985 34443 1 3 899999998764322222100
Q ss_pred CCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEE--EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688 121 KNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTI--WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD 196 (349)
Q Consensus 121 ~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 196 (349)
...........+.++| ++++++++.. +..+.+ +|..+ +. .+.. .+. ....|++. .
T Consensus 118 ~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~-----------~i~v-~~~---~~~~p~g~--~ 176 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQ-----------LTKS-ASC---FHIHPGAA--A 176 (368)
T ss_dssp CSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EE-----------EEEC-SSC---CCCEEEET--T
T ss_pred cccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ce-----------EEEC-CCc---eEEccCCC--e
Confidence 0000001234588998 8988888875 457888 99877 21 1211 111 22345553 5
Q ss_pred EEEEEcCCCcEEEEECCC-----CCceeee--eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEe
Q psy17688 197 MFASVGAEGSVRMFDLRH-----LEHSTII--YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARL 268 (349)
Q Consensus 197 ~l~~~~~d~~v~iwd~~~-----~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~ 268 (349)
.+++.+.|+.+.+.|+.+ ++..... .......+. . .+ ++..++..+. + .+.+.|..... ..+..+
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~-~~~~~~~vs~-~-~V~viD~~~~~~~v~~~~ 249 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN-YPGMLVWAVA-S-SILQGDIPAAGATMKAAI 249 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ET-TTTEEEECBS-S-CCEEEECCSSCCEEECCC
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cc-cCCEEEEEcC-C-EEEEEECCCCcceEEEEE
Confidence 667777888888889876 2211000 000112233 3 55 4444444444 6 59999986411 122222
Q ss_pred ec-------C---CcceEEEEEeeCCCCEEEEEc---C-----CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 269 NN-------H---RACVNGIAWAPHSSCHICTAG---D-----DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 269 ~~-------~---~~~v~~~~~~p~~~~~l~~~~---~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
.. + ......+.++|+++.++++.. . ++.+.++|+.+.+. +..+.. .....+++|+|
T Consensus 250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v-----v~~i~v-g~~p~gi~~s~ 323 (368)
T 1mda_H 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-----SGPISN-GHDSDAIIAAQ 323 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-----EECCEE-EEEECEEEECC
T ss_pred EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE-----EEEEEC-CCCcceEEECC
Confidence 11 0 011222689999998444433 2 23566999988433 333333 33678999999
Q ss_pred CCCceEEEEc--CCeEEEeeC
Q psy17688 331 TQPDWIAICY--NKYLEVLRV 349 (349)
Q Consensus 331 ~~~~l~~~~~--d~~v~vw~v 349 (349)
+++.++.++. ++.|.++++
T Consensus 324 Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 324 DGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SSSCEEEEEETTTTEEEEEES
T ss_pred CCCEEEEEccCCCCeEEEEEC
Confidence 9986555554 899999975
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=1.5e-07 Score=74.78 Aligned_cols=203 Identities=10% Similarity=0.055 Sum_probs=132.1
Q ss_pred EecCCC--CeeEEEEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688 70 TIDHPY--PTTKIMWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG 143 (349)
Q Consensus 70 ~~~~~~--~v~~~~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (349)
.+.|.. ....+.|++++. ++++.+ + .|+++|+.+++......+..+ .....+++. .+.+.+
T Consensus 14 ~~p~~~~~f~~Gl~~~~dg~-----Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~------~fgeGi~~~--g~~lyv 80 (266)
T 2iwa_A 14 EFPHDPYAFTQGLVYAENDT-----LFESTGLYGRSSVRQVALQTGKVENIHKMDDS------YFGEGLTLL--NEKLYQ 80 (266)
T ss_dssp EEECCTTCCEEEEEECSTTE-----EEEEECSTTTCEEEEEETTTCCEEEEEECCTT------CCEEEEEEE--TTEEEE
T ss_pred EEECCCCCCcccEEEeCCCe-----EEEECCCCCCCEEEEEECCCCCEEEEEecCCC------cceEEEEEe--CCEEEE
Confidence 344553 367999999864 555543 3 999999998764322222111 111235543 334555
Q ss_pred EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
+.-.++.+.++|..+.+.+. .+..... ....+++++ ..++.+..++.|.++|..+.+....+..
T Consensus 81 ~t~~~~~v~viD~~t~~v~~-----------~i~~g~~--~g~glt~Dg---~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIK-----------NFTHQMK--DGWGLATDG---KILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EETTCSEEEEEETTTTEEEE-----------EEECCSS--SCCEEEECS---SSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEecCCEEEEEECCCCcEEE-----------EEECCCC--CeEEEEECC---CEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 55567899999999988873 3322111 224456677 4555566789999999998775554443
Q ss_pred CCCCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCE
Q psy17688 224 DPQHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCH 287 (349)
Q Consensus 224 ~~~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~ 287 (349)
..... .++.+.|. ++.+++....++ .|.+.|..+ ++.+..+... ....+.|+|+|+++.+
T Consensus 145 g~~~~p~~~~nele~~--dg~lyvn~~~~~-~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l 220 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI--NGEVWANIWQTD-CIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI 220 (266)
T ss_dssp EETTEECCCEEEEEEE--TTEEEEEETTSS-EEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred CCCCcccccceeEEEE--CCEEEEecCCCC-eEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence 22222 35678887 454444443456 799999998 7777776531 1246899999999887
Q ss_pred EEEEcCCCcEEEEEeecC
Q psy17688 288 ICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 288 l~~~~~d~~v~iwd~~~~ 305 (349)
++++...+.|...++...
T Consensus 221 fVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 221 FVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTCSEEEEEEEEEC
T ss_pred EEECCCCCeEEEEEEecc
Confidence 889989999999999874
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=2.9e-06 Score=68.27 Aligned_cols=256 Identities=9% Similarity=-0.005 Sum_probs=144.3
Q ss_pred CceEEEEEeeecccCCeEEEEeccccccccc-cceEe-cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc
Q psy17688 36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFG-PKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET 111 (349)
Q Consensus 36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~ 111 (349)
|++ |..+.. +.|+.++++....... ..... .....+..++|++++.. ++++.. + .|..++.+....
T Consensus 1 ~~~-l~~~~~-----~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~----ly~~d~~~~~I~~~~~~g~~~ 70 (267)
T 1npe_A 1 GTH-LLFAQT-----GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKV----VYWTDISEPSIGRASLHGGEP 70 (267)
T ss_dssp CEE-EEEEEE-----EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTE----EEEEETTTTEEEEEESSSCCC
T ss_pred CcE-EEEEcC-----CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCE----EEEEECCCCEEEEEecCCCCc
Confidence 344 555543 4677777754321110 01111 11235789999997653 555544 3 999999876432
Q ss_pred hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688 112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191 (349)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 191 (349)
....... ......+++++..+.++++-...+.|.++++...... ............++++|+
T Consensus 71 --~~~~~~~-----~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-----------~~~~~~~~~P~~i~vd~~ 132 (267)
T 1npe_A 71 --TTIIRQD-----LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-----------VLFDTGLVNPRGIVTDPV 132 (267)
T ss_dssp --EEEECTT-----CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSSEEEEEEETT
T ss_pred --EEEEECC-----CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-----------EEEECCCCCccEEEEeeC
Confidence 1121111 1345788888733445555556788999998643321 111112245789999996
Q ss_pred CCCccEEEEEcC--CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688 192 GGGRDMFASVGA--EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN 269 (349)
Q Consensus 192 ~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~ 269 (349)
+. .++++... .+.|..+++..... ..+.. ........++++| ++..|+.+......|.++|+.. ......+.
T Consensus 133 ~g--~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~-~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~ 206 (267)
T 1npe_A 133 RG--NLYWTDWNRDNPKIETSHMDGTNR-RILAQ-DNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQ-PGRRKVLE 206 (267)
T ss_dssp TT--EEEEEECCSSSCEEEEEETTSCCC-EEEEC-TTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTE-EEEEEEEE
T ss_pred CC--EEEEEECCCCCcEEEEEecCCCCc-EEEEE-CCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCC-CceEEEec
Confidence 51 44454433 46888888875332 22221 2234678999999 6666665554433699999874 33222223
Q ss_pred cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcCCCC
Q psy17688 270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGATQP 333 (349)
Q Consensus 270 ~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 333 (349)
. ......++. ++..++++....+.|..+|..+++ .+..+.... ....++++.|++.
T Consensus 207 ~-~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~-----~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 207 G-LQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISK-----EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp C-CCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTE-----EEEEECCSSCCCCCCEEEECSCC
T ss_pred C-CCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCC-----ceEEEccccccccceeeecCccC
Confidence 2 233456654 456645555567889999987632 234443322 2467788887753
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.05 E-value=2.7e-08 Score=83.42 Aligned_cols=208 Identities=12% Similarity=0.049 Sum_probs=124.2
Q ss_pred ceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC--
Q psy17688 128 PLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-- 203 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-- 203 (349)
....+++++ +++++++.. .++.++||.+.+++.. .+.... .....+...+..+++++++ +++++-..
T Consensus 18 ~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~----~~~~~~~~~p~gv~~d~~g---~L~v~D~g~~ 88 (343)
T 2qe8_A 18 APGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS----GNAIITFDTVLGIKSDGNG---IVWMLDNGNQ 88 (343)
T ss_dssp CEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC----SSCCCCCSCEEEEEECSSS---EEEEEECHHH
T ss_pred CcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc----cCcccceeEeeEEEEcCCC---cEEEEcCCCC
Confidence 567889987 888888864 2343566666544322 111000 0112355679999999998 66665443
Q ss_pred ---CCcEEEEECCCCCceeeeeeC----CCCCceeEEEEeCCCCCeEEEEe---eCCcEEEEEeccCCCcceeEeecC--
Q psy17688 204 ---EGSVRMFDLRHLEHSTIIYED----PQHTPLLRLAWNKQDPNYLAMVA---MNACEVIILDVRVPCTPVARLNNH-- 271 (349)
Q Consensus 204 ---d~~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~---~d~~~i~v~d~~~~~~~~~~~~~~-- 271 (349)
++.|.+||+.+++....+... .....+..++++|.++..+++.. .++ .|.+||+.. ++....+..|
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~-~i~v~d~~~-g~~~r~~~~~~~ 166 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA-ALIRVDLQT-GLAARVLQGYPG 166 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC-EEEEEETTT-CCEEEECTTCTT
T ss_pred cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC-eEEEEECCC-CCEEEEecCCCc
Confidence 578999999987644333221 12235689999983344444444 566 599999875 4433333221
Q ss_pred ---------------------------CcceEEEEEeeCCCCEEEEEcCCC-cEEEEEeecCCCCC-C-----CcEEEEe
Q psy17688 272 ---------------------------RACVNGIAWAPHSSCHICTAGDDH-QALIWDIQQMPRAI-E-----DPILAYT 317 (349)
Q Consensus 272 ---------------------------~~~v~~~~~~p~~~~~l~~~~~d~-~v~iwd~~~~~~~~-~-----~~~~~~~ 317 (349)
...+..|+|+|+++. |+.+..++ .+..++........ . ..+. ..
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~ 244 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RY 244 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EE
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ec
Confidence 123688999999998 66665555 45444433211000 0 0111 12
Q ss_pred ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 318 AAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 318 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
++......++++++|..+++...++.|.+|+
T Consensus 245 g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 245 SEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp EECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred ccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 3344567899999998666666678999987
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=8.6e-07 Score=75.21 Aligned_cols=264 Identities=9% Similarity=0.034 Sum_probs=145.1
Q ss_pred EEEEeeecccCCeEEEEeccccccccccceEecCCCCee-EEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheec
Q psy17688 40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT-KIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECIL 117 (349)
Q Consensus 40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~ 117 (349)
+.+++. ++.|..++.. +|+..-..... ..+. .... .++. +++...+ .+..+|..+++.......
T Consensus 106 v~v~~~----~g~l~a~d~~--tG~~~W~~~~~--~~~~~~p~~-~~~~-----v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 106 VYIGSE----KAQVYALNTS--DGTVAWQTKVA--GEALSRPVV-SDGL-----VLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp EEEEET----TSEEEEEETT--TCCEEEEEECS--SCCCSCCEE-ETTE-----EEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEcC----CCEEEEEECC--CCCEEEEEeCC--CceEcCCEE-ECCE-----EEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 677776 7888888654 45544332221 1221 1112 2342 4444445 899999988764333222
Q ss_pred cCCCC--CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCce-eeEEEecCCCC
Q psy17688 118 NNNKN--SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV-YDIAFSRAGGG 194 (349)
Q Consensus 118 ~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~ 194 (349)
..... .....++ . .+..++.+..++.|..+|..+++...............+... ..+ ..... .+
T Consensus 172 ~~~~~~~~~~~~~~----~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~~~p~~--~~-- 239 (376)
T 3q7m_A 172 DMPSLSLRGESAPT----T---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRL-SDVDTTPVV--VN-- 239 (376)
T ss_dssp CC-----CCCCCCE----E---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC------------CCCCCCEE--ET--
T ss_pred CCCceeecCCCCcE----E---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccc-cccCCCcEE--EC--
Confidence 11100 0001111 1 245788888899999999999988754321100000000000 001 11111 12
Q ss_pred ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCc
Q psy17688 195 RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRA 273 (349)
Q Consensus 195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~ 273 (349)
..++.++.++.+..+|.++++...... ......+.. .+..+++++.++ .+..+|..+ ++.+..... ...
T Consensus 240 -~~v~~~~~~g~l~~~d~~tG~~~w~~~----~~~~~~~~~---~~~~l~~~~~~g-~l~~~d~~t-G~~~w~~~~~~~~ 309 (376)
T 3q7m_A 240 -GVVFALAYNGNLTALDLRSGQIMWKRE----LGSVNDFIV---DGNRIYLVDQND-RVMALTIDG-GVTLWTQSDLLHR 309 (376)
T ss_dssp -TEEEEECTTSCEEEEETTTCCEEEEEC----CCCEEEEEE---ETTEEEEEETTC-CEEEEETTT-CCEEEEECTTTTS
T ss_pred -CEEEEEecCcEEEEEECCCCcEEeecc----CCCCCCceE---ECCEEEEEcCCC-eEEEEECCC-CcEEEeecccCCC
Confidence 477778889999999999887543332 122344443 456777788888 499999987 666665542 122
Q ss_pred ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 274 CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 274 ~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
.+...... +.. |+.++.+|.|+++|..++ +.+..+......+.......++ .|++++.+|.|..|+
T Consensus 310 ~~~~~~~~--~~~-l~v~~~~g~l~~~d~~tG-----~~~~~~~~~~~~~~~~~~~~~~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 310 LLTSPVLY--NGN-LVVGDSEGYLHWINVEDG-----RFVAQQKVDSSGFQTEPVAADG-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCCCCEEE--TTE-EEEECTTSEEEEEETTTC-----CEEEEEECCTTCBCSCCEEETT-EEEEEBTTSCEEEEE
T ss_pred cccCCEEE--CCE-EEEEeCCCeEEEEECCCC-----cEEEEEecCCCcceeCCEEECC-EEEEEeCCCEEEEEe
Confidence 22223332 455 888888999999999884 3344444323333221111234 588899999999886
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.03 E-value=1.1e-06 Score=70.76 Aligned_cols=224 Identities=10% Similarity=0.025 Sum_probs=133.7
Q ss_pred EEEEeCCcEEEEECCCCCchhh---eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688 93 LLATSGDYLRVWRAGEPETRLE---CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS 169 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (349)
++.+..+.|+.++++....... ..+... ......++|++.++.++++-..++.|..+++......
T Consensus 4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~------- 71 (267)
T 1npe_A 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIP-----AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT------- 71 (267)
T ss_dssp EEEEEEEEEEEEEESSSCBCGGGCEEEEEEE-----EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------
T ss_pred EEEEcCCeEEEEEecCcccccccceeeecCC-----CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------
Confidence 3443334888888876432110 111110 1345689998734455555556789999998765432
Q ss_pred CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-
Q psy17688 170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM- 248 (349)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~- 248 (349)
............++++|++. .++++-...+.|.++|+....... +.. ........++++| ++..|+.+..
T Consensus 72 ----~~~~~~~~~p~~ia~d~~~~--~lyv~d~~~~~I~~~~~~g~~~~~-~~~-~~~~~P~~i~vd~-~~g~lyv~~~~ 142 (267)
T 1npe_A 72 ----TIIRQDLGSPEGIALDHLGR--TIFWTDSQLDRIEVAKMDGTQRRV-LFD-TGLVNPRGIVTDP-VRGNLYWTDWN 142 (267)
T ss_dssp ----EEECTTCCCEEEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEE-EEC-SSCSSEEEEEEET-TTTEEEEEECC
T ss_pred ----EEEECCCCCccEEEEEecCC--eEEEEECCCCEEEEEEcCCCCEEE-EEE-CCCCCccEEEEee-CCCEEEEEECC
Confidence 12222224678999998652 566666778899999987643322 221 1224578999999 5555555554
Q ss_pred --CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688 249 --NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ 325 (349)
Q Consensus 249 --d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 325 (349)
.+ .|..+++.. .....+. ..-.....++++|++..++++-...+.|.++|..... ....... ......
T Consensus 143 ~~~~-~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-----~~~~~~~-~~~P~g 213 (267)
T 1npe_A 143 RDNP-KIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-----RRKVLEG-LQYPFA 213 (267)
T ss_dssp SSSC-EEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-----EEEEEEC-CCSEEE
T ss_pred CCCc-EEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-----eEEEecC-CCCceE
Confidence 35 588888763 3233332 2234678999999888756666677899999986521 1122222 233456
Q ss_pred EEEcCCCCceEEEEc-CCeEEEee
Q psy17688 326 IQWGATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 326 ~~~~~~~~~l~~~~~-d~~v~vw~ 348 (349)
++.. +..++.+.. ++.|.+++
T Consensus 214 i~~d--~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 214 VTSY--GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEEe--CCEEEEEECCCCeEEEEe
Confidence 6654 345666654 47787765
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.99 E-value=2.5e-07 Score=84.65 Aligned_cols=237 Identities=13% Similarity=0.008 Sum_probs=141.8
Q ss_pred EEEEeCC-cEEEEECCCCCchhheecc-CCC--CCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCccee
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILN-NNK--NSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVV 162 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~-~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~ 162 (349)
+++...+ .+..+|..+++........ ... ......++ + .+..+++++. +|.|..+|..+++.+
T Consensus 131 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~--v-----~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 131 VYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPR--V-----FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcE--E-----ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 4444446 9999999888644333221 100 00111121 1 2345555553 689999999999998
Q ss_pred eeecccCCceee------------eee---------ccCCceeeEEEecCCCCccEEEEEcCCC----------------
Q psy17688 163 GRVNSVSGHVKT------------QLI---------AHDKEVYDIAFSRAGGGRDMFASVGAEG---------------- 205 (349)
Q Consensus 163 ~~~~~~~~~~~~------------~~~---------~~~~~v~~~~~~~~~~~~~~l~~~~~d~---------------- 205 (349)
.+.......... ... +.......++++|++ .+++.++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~---~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL---NTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC---CEEEEECCCCccccCCCCCccCCCCe
Confidence 765332111000 000 111223467888887 6788777664
Q ss_pred ---cEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688 206 ---SVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARLNNHR 272 (349)
Q Consensus 206 ---~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~ 272 (349)
.|..+|.++++..-......+. .....+.... ++ ..++.++.+| .++++|.++ ++.+..+....
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G-~l~~lD~~t-G~~l~~~~~~~ 357 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNG-FFFVLDRTN-GKFISAKNFVP 357 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSC
T ss_pred eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCC-EEEEEECCC-CCEeccccccc
Confidence 5999999998866554433221 2222333333 55 6888999999 699999987 77665543211
Q ss_pred -----------cce------------------------EEEEEeeCCCCEEEEEcC------------------------
Q psy17688 273 -----------ACV------------------------NGIAWAPHSSCHICTAGD------------------------ 293 (349)
Q Consensus 273 -----------~~v------------------------~~~~~~p~~~~~l~~~~~------------------------ 293 (349)
.++ ..++++|+... +++...
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~ 436 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL-VYLPAQNVPVNLMDDKKWEFNQAGPGKPQS 436 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE-EEEEEEECCCEEEECTTCCTTCCCTTSTTG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE-EEEeChhcceeeeccccccccccccccccc
Confidence 001 14688888876 555332
Q ss_pred -------------------CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 294 -------------------DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 294 -------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
.|.|..||+.+++ .+-.+.. ..++.+..+...+..++.++.|+.+++|++
T Consensus 437 ~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 437 GTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK-----AAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp GGTCCCCEEECSSCCCSCCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ccccccccccccccCCCCCccEEEEEeCCCCc-----EEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 2678999988743 2333433 445566667777777888888999999974
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=2.5e-08 Score=82.98 Aligned_cols=273 Identities=10% Similarity=-0.021 Sum_probs=151.0
Q ss_pred ccceeeeeecCCce-eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688 12 TQKEIYKYEAPWPL-YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF 90 (349)
Q Consensus 12 ~~~~~~~~~~~~~v-~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 90 (349)
..+.+.++..+..+ .+..... +|. |.+++. ++.|..|+ . +++...... .....+.++...+++.
T Consensus 8 ~g~~~W~~~~~~~~~~~~~~d~--~g~--l~v~t~----~~~l~~~d-~--~g~~~~~~~-~~~~~~~~~~~~~~g~--- 72 (330)
T 3hxj_A 8 DCKIKWEFLIGNSIDSSPILAK--NGT--IYLGSS----NKNLYAIN-T--DGSVKWFFK-SGEIIECRPSIGKDGT--- 72 (330)
T ss_dssp ----CCTTTSCEEECCCCEECT--TSC--EECSST----TTTTEEEC-T--TSCEEESSC-GGGEEEECCEETTTTE---
T ss_pred CceEEEEEeCCCCcccCceEcc--CCe--EEEEcC----CCEEEEEC-C--CCcEEEEEe-cCCCcccceEEecCCc---
Confidence 34445555555332 2333322 564 777776 77788886 3 344332211 1222345666666664
Q ss_pred CcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 91 PDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 91 ~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
+.+...+ +..+|. +++... ...... ........ .+..+..++.++.|..+|.. ++...
T Consensus 73 --l~v~t~~-l~~~d~-~g~~~~--~~~~~~-----~~~~~~~~---~~~~l~v~t~~~~l~~~d~~-g~~~~------- 130 (330)
T 3hxj_A 73 --IYFGSDK-VYAINP-DGTEKW--RFDTKK-----AIVSDFTI---FEDILYVTSMDGHLYAINTD-GTEKW------- 130 (330)
T ss_dssp --ECCSSCE-EEEECC-CGGGGG--GSCC----------CCEEE---ETTEEEEECTTSEEEEECTT-SCEEE-------
T ss_pred --EEEecCc-EEEECC-CCcEEE--EEECCC-----CcccCceE---ECCEEEEEecCCEEEEEcCC-CCEEE-------
Confidence 4443335 666764 322111 111111 11112222 15567888888999999988 66552
Q ss_pred ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
........+.++...+++ .+..++.++.|..+|.. ++...... .....+.++...+ ++.+ .+++ +
T Consensus 131 ----~~~~~~~~~~~~~~~~~g----~l~vgt~~~~l~~~d~~-g~~~~~~~--~~~~~~~~~~~d~-~g~l-~v~t--~ 195 (330)
T 3hxj_A 131 ----RFKTKKAIYATPIVSEDG----TIYVGSNDNYLYAINPD-GTEKWRFK--TNDAITSAASIGK-DGTI-YFGS--D 195 (330)
T ss_dssp ----EEECSSCCCSCCEECTTS----CEEEECTTSEEEEECTT-SCEEEEEE--CSSCCCSCCEECT-TCCE-EEES--S
T ss_pred ----EEcCCCceeeeeEEcCCC----EEEEEcCCCEEEEECCC-CCEeEEEe--cCCCceeeeEEcC-CCEE-EEEe--C
Confidence 233334446667776666 46678888999999998 55433332 1234566777766 5554 4445 5
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
. +..+| .+ ++...........+.++...++|. |..++.++.+..+|... ..+..+......+..+...+
T Consensus 196 ~-l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g------~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3hxj_A 196 K-VYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG------TEKWRFKTGKRIESSPVIGN 264 (330)
T ss_dssp S-EEEEC-TT-SCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS------CEEEEEECSSCCCSCCEECT
T ss_pred E-EEEEC-CC-CcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC------CEeEEeeCCCCccccceEcC
Confidence 3 99999 54 666666655556688888887775 56666777888886422 22333433333344555555
Q ss_pred CCCceEEEEcCCeEEEee
Q psy17688 331 TQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 331 ~~~~l~~~~~d~~v~vw~ 348 (349)
++. |.+++.++.|..++
T Consensus 265 ~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 265 TDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp TSC-EEEECTTCEEEEEC
T ss_pred CCe-EEEecCCCCEEEEC
Confidence 553 66666676666654
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=6.5e-07 Score=71.12 Aligned_cols=191 Identities=9% Similarity=0.039 Sum_probs=124.0
Q ss_pred eeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688 129 LTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS 206 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~ 206 (349)
...+.|++ ++.++++.+. ++.|.++|+.+++.+..+. +..+ .....+++. +. .+.++.-.++.
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~---------l~~~-~fgeGi~~~--g~--~lyv~t~~~~~ 87 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHK---------MDDS-YFGEGLTLL--NE--KLYQVVWLKNI 87 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEE---------CCTT-CCEEEEEEE--TT--EEEEEETTCSE
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEe---------cCCC-cceEEEEEe--CC--EEEEEEecCCE
Confidence 46788987 5554444443 5799999999999884321 1111 122345554 32 56667778899
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-----cceEEEEEe
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-----ACVNGIAWA 281 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-----~~v~~~~~~ 281 (349)
+.++|..+.+....+... ... ...+++ ++..++++..++ .|.++|..+ .+.+..+.-.. ..++.+.|.
T Consensus 88 v~viD~~t~~v~~~i~~g--~~~--g~glt~-Dg~~l~vs~gs~-~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ--MKD--GWGLAT-DGKILYGSDGTS-ILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp EEEEETTTTEEEEEEECC--SSS--CCEEEE-CSSSEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECCCCcEEEEEECC--CCC--eEEEEE-CCCEEEEECCCC-eEEEEECCC-CcEEEEEEECCCCcccccceeEEEE
Confidence 999999987765555322 112 233455 666666666677 699999987 56666654321 136788888
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-------------CCceEEEEEcCCCCceEEEEc-CCeEEEe
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-------------GGEINQIQWGATQPDWIAICY-NKYLEVL 347 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~-d~~v~vw 347 (349)
++.. .+....++.|.+.|..+++ .+..+... ......++|+|+++.+++++. ..++.+.
T Consensus 161 -dg~l-yvn~~~~~~V~vID~~tg~-----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 161 -NGEV-WANIWQTDCIARISAKDGT-----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp -TTEE-EEEETTSSEEEEEETTTCC-----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred -CCEE-EEecCCCCeEEEEECCCCc-----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence 6643 6666668899999998843 34444321 135689999999988887775 4777765
Q ss_pred e
Q psy17688 348 R 348 (349)
Q Consensus 348 ~ 348 (349)
+
T Consensus 234 ~ 234 (266)
T 2iwa_A 234 K 234 (266)
T ss_dssp E
T ss_pred E
Confidence 4
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.96 E-value=2.5e-07 Score=76.90 Aligned_cols=211 Identities=11% Similarity=0.000 Sum_probs=129.8
Q ss_pred EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
+.+...+ .+..+|.. ++.... ..... ..+.++...+ ...+..++.++.|..+|.. ++...
T Consensus 110 l~v~t~~~~l~~~d~~-g~~~~~--~~~~~-----~~~~~~~~~~--~g~l~vgt~~~~l~~~d~~-g~~~~-------- 170 (330)
T 3hxj_A 110 LYVTSMDGHLYAINTD-GTEKWR--FKTKK-----AIYATPIVSE--DGTIYVGSNDNYLYAINPD-GTEKW-------- 170 (330)
T ss_dssp EEEECTTSEEEEECTT-SCEEEE--EECSS-----CCCSCCEECT--TSCEEEECTTSEEEEECTT-SCEEE--------
T ss_pred EEEEecCCEEEEEcCC-CCEEEE--EcCCC-----ceeeeeEEcC--CCEEEEEcCCCEEEEECCC-CCEeE--------
Confidence 4444435 88899887 432211 11111 2233444432 3457778888999999988 66652
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 251 (349)
.+......+.++...+++ . +..++ +.|..+| .+++...... .....+.++...+ ++ .+.+++.++.
T Consensus 171 ---~~~~~~~~~~~~~~d~~g---~-l~v~t--~~l~~~d-~~g~~~~~~~--~~~~~~~~~~~~~-~g-~l~v~t~~~g 236 (330)
T 3hxj_A 171 ---RFKTNDAITSAASIGKDG---T-IYFGS--DKVYAIN-PDGTEKWNFY--AGYWTVTRPAISE-DG-TIYVTSLDGH 236 (330)
T ss_dssp ---EEECSSCCCSCCEECTTC---C-EEEES--SSEEEEC-TTSCEEEEEC--CSSCCCSCCEECT-TS-CEEEEETTTE
T ss_pred ---EEecCCCceeeeEEcCCC---E-EEEEe--CEEEEEC-CCCcEEEEEc--cCCcceeceEECC-CC-eEEEEcCCCe
Confidence 233334456777777776 4 44455 8899999 5554332222 2335577888876 55 4556666774
Q ss_pred EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT 331 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 331 (349)
+..+|.. +..+..+......+..+...+++ . |..++.+|.|..+|. . .+.+..+......+.++...++
T Consensus 237 -l~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g-~-l~v~t~~ggl~~~d~-~-----g~~~~~~~~~~~~~~~~~~d~~ 305 (330)
T 3hxj_A 237 -LYAINPD--GTEKWRFKTGKRIESSPVIGNTD-T-IYFGSYDGHLYAINP-D-----GTEKWNFETGSWIIATPVIDEN 305 (330)
T ss_dssp -EEEECTT--SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTCEEEEECT-T-----SCEEEEEECSSCCCSCCEECTT
T ss_pred -EEEECCC--CCEeEEeeCCCCccccceEcCCC-e-EEEecCCCCEEEECC-C-----CcEEEEEEcCCccccceEEcCC
Confidence 8888753 55555555444444555555555 4 777888888999985 3 2234444444556778888788
Q ss_pred CCceEEEEcCCeEEEee
Q psy17688 332 QPDWIAICYNKYLEVLR 348 (349)
Q Consensus 332 ~~~l~~~~~d~~v~vw~ 348 (349)
+. |.+++.+|.+++..
T Consensus 306 g~-l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 306 GT-IYFGTRNGKFYALF 321 (330)
T ss_dssp CC-EEEECTTSCEEEEE
T ss_pred CE-EEEEcCCCeEEEEe
Confidence 85 78888999988764
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.96 E-value=9.5e-10 Score=93.17 Aligned_cols=201 Identities=11% Similarity=-0.011 Sum_probs=101.2
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR 112 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~ 112 (349)
++. +|++++. +|.|..|+.. +|+..-... . ..+.+..+..++. ++++++ + .|..||..+++..
T Consensus 8 ~~~-~v~~gs~----dg~v~a~d~~--tG~~~W~~~--~-~~~~s~p~~~~g~-----~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PET-LLFVSTL----DGSLHAVSKR--TGSIKWTLK--E-DPVLQVPTHVEEP-----AFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CTT-EEEEEET----TSEEEEEETT--TCCEEEEEE--C-CCSCCCC-----C-----CEEECTTTCCEEEC-----CCS
T ss_pred eCC-EEEEEcC----CCEEEEEECC--CCCEEEEec--C-CCceecceEcCCC-----EEEEeCCCCEEEEEECCCCcee
Confidence 566 3888988 9999999765 555543332 2 4555555566665 666654 5 9999999776532
Q ss_pred hheeccCCCC-CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688 113 LECILNNNKN-SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191 (349)
Q Consensus 113 ~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 191 (349)
... ..+.. .....++. ..+..+++++.++.|..||..+++.... +..+. ...++|.
T Consensus 73 w~~--~~~~~~~~~~sp~~------~~~~~v~~g~~dg~v~a~D~~tG~~~w~-----------~~~~~----~~~~~p~ 129 (369)
T 2hz6_A 73 TKL--PFTIPELVQASPCR------SSDGILYMGKKQDIWYVIDLLTGEKQQT-----------LSSAF----ADSLSPS 129 (369)
T ss_dssp EEC--SCCHHHHHTTCSCC-----------CCCCEEEEEEEEECCC----------------------------------
T ss_pred eee--eccCccccccCceE------ecCCEEEEEeCCCEEEEEECCCCcEEEE-----------ecCCC----ccccccc
Confidence 211 11100 00011111 1345778888999999999999988742 22222 1345666
Q ss_pred CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARL 268 (349)
Q Consensus 192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~ 268 (349)
+ ..+++++.|+.|+.||.++++........ .....++.+ +. ..+++++.++ .+..||.++ ++.+...
T Consensus 130 ~---~~v~~~~~dg~v~a~d~~tG~~~W~~~~~----~~~~~~~~~-~~~~~~~v~~~~~dg-~v~a~d~~t-G~~~W~~ 199 (369)
T 2hz6_A 130 T---SLLYLGRTEYTITMYDTKTRELRWNATYF----DYAASLPED-DVDYKMSHFVSNGDG-LVVTVDSES-GDVLWIQ 199 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCCEEEEE----EECCBCCCC-CTTCCCCEEEEETSC-EEEEECTTT-CCEEEEE
T ss_pred C---CEEEEEecCCEEEEEECCCCCEEEeEecc----cccCccccC-CccccceEEEECCCC-EEEEEECCC-CcEEEEe
Confidence 6 78889999999999999988754333211 112222332 21 5677788899 699999987 7777666
Q ss_pred ecCCcceEE-EEEeeCC
Q psy17688 269 NNHRACVNG-IAWAPHS 284 (349)
Q Consensus 269 ~~~~~~v~~-~~~~p~~ 284 (349)
.. ..++.. ..+++++
T Consensus 200 ~~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 200 NY-ASPVVAFYVWQREG 215 (369)
T ss_dssp EC-SSCEEEEEECTTSS
T ss_pred cC-CCceEEEEEecCCc
Confidence 53 334332 3334444
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=2.6e-06 Score=72.21 Aligned_cols=264 Identities=9% Similarity=-0.021 Sum_probs=145.2
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecC--------CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEE
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH--------PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWR 105 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~ 105 (349)
++. +|.+++. ++.|..++.. +++..-...... ...+.+.-...++. +++...+ .|..+|
T Consensus 52 ~~~-~v~~~~~----~g~v~a~d~~--tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~v~~~~g~l~a~d 119 (376)
T 3q7m_A 52 ADN-VVYAADR----AGLVKALNAD--DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGH-----VYIGSEKAQVYALN 119 (376)
T ss_dssp ETT-EEEEECT----TSEEEEEETT--TCCEEEEEECCC---CCSCCCCCEEEEEEEETTE-----EEEEETTSEEEEEE
T ss_pred ECC-EEEEEcC----CCeEEEEEcc--CCceeeeecCccccccccccCcccccCceEeCCE-----EEEEcCCCEEEEEE
Confidence 344 3777766 7888888664 455443322211 22333322223443 5555455 899999
Q ss_pred CCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688 106 AGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD 185 (349)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (349)
..+++......... .....++ . .+..++.++.++.|..+|..+++.......... ....... ..
T Consensus 120 ~~tG~~~W~~~~~~---~~~~~p~----~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~--~~~~~~~----~~ 183 (376)
T 3q7m_A 120 TSDGTVAWQTKVAG---EALSRPV----V---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP--SLSLRGE----SA 183 (376)
T ss_dssp TTTCCEEEEEECSS---CCCSCCE----E---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-------CCC----CC
T ss_pred CCCCCEEEEEeCCC---ceEcCCE----E---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC--ceeecCC----CC
Confidence 98876443322221 1111222 1 345788888999999999999988754321100 0000000 11
Q ss_pred EEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC--c------e-eEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688 186 IAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT--P------L-LRLAWNKQDPNYLAMVAMNACEVIIL 256 (349)
Q Consensus 186 ~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~------v-~~~~~~~~~~~~l~~~~~d~~~i~v~ 256 (349)
.... + ..++.++.++.+..+|.++++............ . + ..... .+..+++++.++ .+..+
T Consensus 184 ~~~~--~---~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g-~l~~~ 254 (376)
T 3q7m_A 184 PTTA--F---GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNG-NLTAL 254 (376)
T ss_dssp CEEE--T---TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTS-CEEEE
T ss_pred cEEE--C---CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCc-EEEEE
Confidence 2222 2 367778889999999999887554332211100 0 1 11111 246677778888 49999
Q ss_pred eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCCCce
Q psy17688 257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQPDW 335 (349)
Q Consensus 257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 335 (349)
|.++ ++.+..... .....+.. ++.. +..++.++.|..+|..+++ .+..... ....+...... +..+
T Consensus 255 d~~t-G~~~w~~~~--~~~~~~~~--~~~~-l~~~~~~g~l~~~d~~tG~-----~~w~~~~~~~~~~~~~~~~--~~~l 321 (376)
T 3q7m_A 255 DLRS-GQIMWKREL--GSVNDFIV--DGNR-IYLVDQNDRVMALTIDGGV-----TLWTQSDLLHRLLTSPVLY--NGNL 321 (376)
T ss_dssp ETTT-CCEEEEECC--CCEEEEEE--ETTE-EEEEETTCCEEEEETTTCC-----EEEEECTTTTSCCCCCEEE--TTEE
T ss_pred ECCC-CcEEeeccC--CCCCCceE--ECCE-EEEEcCCCeEEEEECCCCc-----EEEeecccCCCcccCCEEE--CCEE
Confidence 9987 666655442 23344433 3555 7777889999999998743 2333331 11222222222 3457
Q ss_pred EEEEcCCeEEEee
Q psy17688 336 IAICYNKYLEVLR 348 (349)
Q Consensus 336 ~~~~~d~~v~vw~ 348 (349)
++++.++.|.+++
T Consensus 322 ~v~~~~g~l~~~d 334 (376)
T 3q7m_A 322 VVGDSEGYLHWIN 334 (376)
T ss_dssp EEECTTSEEEEEE
T ss_pred EEEeCCCeEEEEE
Confidence 7777788888776
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.89 E-value=1.7e-07 Score=82.16 Aligned_cols=243 Identities=12% Similarity=0.102 Sum_probs=138.4
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEE-e-cCCCCCCCcEEEEeC--------------
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW-I-PDRKGVFPDLLATSG-------------- 98 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~~l~~~~-------------- 98 (349)
||+| |.+.. ..+++|.+.+++. .+......+.....+..+++ + |++. ++.+++
T Consensus 100 DG~~-lfVnd---~~~~rVavIdl~t--~~~~~ii~ip~g~~phg~~~~~~p~~~-----~v~~~~~~~~p~~~dg~~l~ 168 (595)
T 1fwx_A 100 DGRF-LFMND---KANTRVARVRCDV--MKCDAILEIPNAKGIHGLRPQKWPRSN-----YVFCNGEDETPLVNDGTNME 168 (595)
T ss_dssp EEEE-EEEEE---TTTTEEEEEETTT--TEEEEEEECSSCCSEEEEEECCSSBCS-----EEEEEECSCEESSCSSSSTT
T ss_pred CCCE-EEEEc---CCCCEEEEEECCC--ceEeeEEeCCCCCCCcceeeeecCCCc-----EEEEecccccccCCCCcccc
Confidence 7886 55432 2378899998863 33333224444456889887 4 8887 444441
Q ss_pred -----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---------------eEEEEecc
Q psy17688 99 -----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---------------TCTIWCLE 157 (349)
Q Consensus 99 -----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~ 157 (349)
+ .+.+.|.++.+...+....+ ....++.+| +++++++.+.+. .|.+.|..
T Consensus 169 ~~~~~~~~vtvID~~t~~v~~qI~Vgg--------~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWEVAWQVLVSG--------NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp CGGGEEEEEEEEETTTTEEEEEEEESS--------CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred cccccCceEEEEECCCCeEEEEEEeCC--------CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 2 78888888754332222212 112356776 788877777553 24444432
Q ss_pred Ccce------------eeeecccC--Cce-eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-----
Q psy17688 158 TNQV------------VGRVNSVS--GHV-KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH----- 217 (349)
Q Consensus 158 ~~~~------------~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----- 217 (349)
.... +..++... +.. ...+.. .....++.++|+++ ..++++..+.+|.++|+.+.+.
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk--~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKK--HLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSS--EEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCC--EEEEeCCCCCeEEEEECcccccccccc
Confidence 2110 11111111 111 122222 23578899999994 4555566789999999996421
Q ss_pred ----eeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCC---------CcceeEeecCCcce-----EEE
Q psy17688 218 ----STIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVP---------CTPVARLNNHRACV-----NGI 278 (349)
Q Consensus 218 ----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~---------~~~~~~~~~~~~~v-----~~~ 278 (349)
...............++|+| ++ .+++.. .++ +|.+||+... .+.+.++..|-.+- ..+
T Consensus 317 l~~~~~v~~~v~vG~gP~h~aF~~-dG-~aY~t~~lds-qV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~ 393 (595)
T 1fwx_A 317 ADPRSAVVAEPELGLGPLHTAFDG-RG-NAYTSLFLDS-QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGE 393 (595)
T ss_dssp CCGGGGEEECCBCCSCEEEEEECT-TS-EEEEEETTTT-EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTT
T ss_pred cCcccceEEEcCCCCCcceEEECC-CC-eEEEEEecCC-cEEEEEhhHhhhhhcccccceeEEEeecccccccceeccce
Confidence 11222334456789999999 77 555544 555 7999998751 23455555553322 223
Q ss_pred EEeeCCCCEEEEEc-CC-CcE-----------EEEEeec
Q psy17688 279 AWAPHSSCHICTAG-DD-HQA-----------LIWDIQQ 304 (349)
Q Consensus 279 ~~~p~~~~~l~~~~-~d-~~v-----------~iwd~~~ 304 (349)
.++|||++ |+++. .. .++ .++|+..
T Consensus 394 t~~~DGk~-l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 394 TLDATNDW-LVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp STTCCSSE-EEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred EeCCCCCE-EEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 55799999 55443 22 233 8888854
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.88 E-value=1.5e-06 Score=79.62 Aligned_cols=237 Identities=11% Similarity=0.023 Sum_probs=137.0
Q ss_pred EEEEeCC-cEEEEECCCCCchhheecc-CCC--CCCCcCceeEEEecCCCCCeEEEEE------cCCeEEEEeccCccee
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILN-NNK--NSDFCAPLTSFDWNEVDPNLLGTSS------IDTTCTIWCLETNQVV 162 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~-~~~--~~~~~~~i~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~ 162 (349)
+++.+.+ .|..+|..+++........ ... ......++ + .+..+++++ .+|.|..||..+++.+
T Consensus 124 v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~--v-----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 124 VYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPR--V-----VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcE--E-----ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 4444446 9999999988754333221 100 01111121 1 123445543 3689999999999998
Q ss_pred eeecccCCceeee------------e--------eccCCceeeEEEecCCCCccEEEEEcCCCc----------------
Q psy17688 163 GRVNSVSGHVKTQ------------L--------IAHDKEVYDIAFSRAGGGRDMFASVGAEGS---------------- 206 (349)
Q Consensus 163 ~~~~~~~~~~~~~------------~--------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~---------------- 206 (349)
.+.....+..... . .++......++++|+. .+++.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~---~~vy~~~~~g~~w~~~~~~~~~gd~~y 273 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL---NLLYIGVGNGSLWDPKWRSQAKGDNLF 273 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC---CEEEEeCCCCCccccCCCCCCCCCcee
Confidence 7654211100000 0 0111122367888887 68888887763
Q ss_pred ---EEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCCC---eEEEEeeCCcEEEEEeccCCCcceeEeecCC-
Q psy17688 207 ---VRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDPN---YLAMVAMNACEVIILDVRVPCTPVARLNNHR- 272 (349)
Q Consensus 207 ---v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~- 272 (349)
|..+|.++++..-......+. .+........ ++. .++.++.+| .++++|.++ ++.+.......
T Consensus 274 ~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~l~~~~~~~~ 350 (689)
T 1yiq_A 274 LSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNG-FFYVIDRAT-GELLSAKGIVPQ 350 (689)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSCC
T ss_pred eeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCC-eEEEEECCC-CCEecccccccc
Confidence 999999999866555433221 1222222222 443 788899999 699999987 66653321100
Q ss_pred cc--------------------------------------eEEEEEeeCCCCEEEEEcC---------------------
Q psy17688 273 AC--------------------------------------VNGIAWAPHSSCHICTAGD--------------------- 293 (349)
Q Consensus 273 ~~--------------------------------------v~~~~~~p~~~~~l~~~~~--------------------- 293 (349)
.. -..++++|+... +++...
T Consensus 351 ~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~~~~~~~~ 429 (689)
T 1yiq_A 351 SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGL-VYIPAHIMSAYYEHIPEAPKRNPFKSM 429 (689)
T ss_dssp SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTE-EEEEEEECCEEEECCSSCCCCCSCTTS
T ss_pred ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCE-EEEeccccceeeeeccccccccccccc
Confidence 00 012678888776 554321
Q ss_pred ------------------------CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 294 ------------------------DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 294 ------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
+|.|+.||+.+++ .+-.+.. ..++....+...+..++.++.|+.++.|+.
T Consensus 430 ~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 430 YQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ-----AAWEVPY-VTIFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp CCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cccCccccccCcccccCCCCCCCcceeEEEEECCCCC-----eEeEccC-CCCccCccceECCCEEEEECCCCcEEEEEC
Confidence 3778899988743 3444444 334444456666777888888999999974
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=5e-05 Score=71.11 Aligned_cols=283 Identities=8% Similarity=0.025 Sum_probs=163.9
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------cCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------DHPYPTTKIMWIPDRKGVFPDLLAT 96 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~l~~ 96 (349)
..|.++...+ +|. |-+|+. ++.|.+|+.. ++++...... -....|.++...+++. +.+.
T Consensus 215 ~~i~~i~~d~--~g~--lwigt~----~~Gl~~~~~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-----lWig 279 (795)
T 4a2l_A 215 KQIQAILQQS--PTR--IWVATE----GAGLFLINPK--TKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-----LWIG 279 (795)
T ss_dssp CCEEEEEEEE--TTE--EEEEEB----SSCEEEEETT--TTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-----EEEE
T ss_pred CeeEEEEEcC--CCC--EEEEEC----CCCeEEEeCC--CCeEEEeecCCCCccccCCCeEEEEEEcCCCC-----EEEE
Confidence 4577777665 675 555665 4457777653 2332211100 0135699998888876 5444
Q ss_pred eCCcEEEEECCCCCchhheeccC--CCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688 97 SGDYLRVWRAGEPETRLECILNN--NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT 174 (349)
Q Consensus 97 ~~~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 174 (349)
..+-|.+|+..+.... ..... .........|.++...+ + ..|-.|+.++-|..|+..+..... +.....
T Consensus 280 t~~Gl~~~~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~D~-~-g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~---- 350 (795)
T 4a2l_A 280 TFNDLNIYHEGTDSFA--SYSSNPVENGSLSQRSVRSIFMDS-Q-GGMWLGTYFGGLNYYHPIRNRFKN-IRNIPY---- 350 (795)
T ss_dssp ESSCEEEEETTTTEEE--EECCCTTSTTSCSSSCEEEEEECT-T-SCEEEEESSSCEEEECGGGGSSEE-ECCCTT----
T ss_pred eCChhheEcCCCCeEE--EEecCCCCCCCCCCCcEEEEEEeC-C-cCEEEEECCCCeEEeCCCcccceE-EcCCCC----
Confidence 3347888887765321 11111 11112235688888764 4 456677877888999876654321 000000
Q ss_pred eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCCCCCeEEEEee
Q psy17688 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
.-.-....|.++...+++ .|-.|+.++-|..||..+++........ -....|.++...+ ++.+|.+|+.
T Consensus 351 ~~~l~~~~V~~i~~d~~g----~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~ 425 (795)
T 4a2l_A 351 KNSLSDNVVSCIVEDKDK----NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTH 425 (795)
T ss_dssp SSSCSCSSEEEEEECTTS----CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEET
T ss_pred CCCCCCCeeEEEEECCCC----CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeC
Confidence 000123458888888776 4556777778999998875432221110 1235688999887 6775777887
Q ss_pred CCcEEEEEeccCCCcceeEee-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-----
Q psy17688 249 NACEVIILDVRVPCTPVARLN-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA----- 318 (349)
Q Consensus 249 d~~~i~v~d~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~----- 318 (349)
+++ +..||..+ ++ ...+. .....|.++...++|.. ..|+.+ .+.+||..+.. ...+..
T Consensus 426 ~~G-l~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~l--wigt~~-Gl~~~~~~~~~------~~~~~~~~~~~ 493 (795)
T 4a2l_A 426 AGG-LSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEGNL--WLGTLS-ALVRFNPEQRS------FTTIEKEKDGT 493 (795)
T ss_dssp TTE-EEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSSCE--EEEESS-CEEEEETTTTE------EEECCBCTTCC
T ss_pred cCc-eeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCCE--EEEecC-ceeEEeCCCCe------EEEcccccccc
Confidence 675 99999875 33 33332 13457899988888874 334444 48888876521 111111
Q ss_pred --cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 319 --AGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 319 --~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
....|.++...+++..+++ +. +.|..|+
T Consensus 494 ~~~~~~i~~i~~d~~g~lWig-t~-~Gl~~~~ 523 (795)
T 4a2l_A 494 PVVSKQITTLFRDSHKRLWIG-GE-EGLSVFK 523 (795)
T ss_dssp BCCCCCEEEEEECTTCCEEEE-ES-SCEEEEE
T ss_pred ccCCceEEEEEECCCCCEEEE-eC-CceEEEe
Confidence 1357899999999875554 44 3455553
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.82 E-value=6.2e-07 Score=78.70 Aligned_cols=231 Identities=13% Similarity=0.004 Sum_probs=142.6
Q ss_pred eEEEEec-----CCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEec--CCCCCeEEEEE--
Q psy17688 78 TKIMWIP-----DRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWN--EVDPNLLGTSS-- 146 (349)
Q Consensus 78 ~~~~~~~-----~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~-- 146 (349)
.....|. |++. ++++..+ .|.+.|+++.+... ++.... ......+++. | +++++++++
T Consensus 88 hh~~~s~t~g~~DG~~----lfVnd~~~~rVavIdl~t~~~~~--ii~ip~----g~~phg~~~~~~p-~~~~v~~~~~~ 156 (595)
T 1fwx_A 88 HHVHMSFTEGKYDGRF----LFMNDKANTRVARVRCDVMKCDA--ILEIPN----AKGIHGLRPQKWP-RSNYVFCNGED 156 (595)
T ss_dssp CCEEEEEETTEEEEEE----EEEEETTTTEEEEEETTTTEEEE--EEECSS----CCSEEEEEECCSS-BCSEEEEEECS
T ss_pred CccccCCCCCCcCCCE----EEEEcCCCCEEEEEECCCceEee--EEeCCC----CCCCcceeeeecC-CCcEEEEeccc
Confidence 3355555 6663 4444443 89999999865322 112111 1345677773 5 788887774
Q ss_pred ----------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----
Q psy17688 147 ----------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG----- 205 (349)
Q Consensus 147 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~----- 205 (349)
.++.+.+.|..+.+...+ +.-- +....++++|++ +++++.+.+.
T Consensus 157 ~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q-----------I~Vg-g~pd~~~~spdG---k~~~vt~~~se~~~~ 221 (595)
T 1fwx_A 157 ETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ-----------VLVS-GNLDNCDADYEG---KWAFSTSYNSEKGMT 221 (595)
T ss_dssp CEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE-----------EEES-SCCCCEEECSSS---SEEEEEESCTTCCSS
T ss_pred ccccCCCCcccccccccCceEEEEECCCCeEEEE-----------EEeC-CCccceEECCCC---CEEEEEecCcccCcc
Confidence 345789999998877742 2211 134667788887 5666555332
Q ss_pred ---------------------------------cEEEEECCC--CCc-eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 206 ---------------------------------SVRMFDLRH--LEH-STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 206 ---------------------------------~v~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
.|.+.|.++ ++. ...+. ......++.++| +++++++++..
T Consensus 222 i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip---vg~~PhGv~~sP-DGk~v~V~~~~ 297 (595)
T 1fwx_A 222 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP---IANNPHGCNMAP-DKKHLCVAGKL 297 (595)
T ss_dssp HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE---EESSCCCEEECT-TSSEEEEECTT
T ss_pred hhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe---cCCCceEEEEcC-CCCEEEEeCCC
Confidence 477777776 322 22221 224567899999 88887777654
Q ss_pred CcEEEEEeccCCC-----------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC-----CCCCCcE
Q psy17688 250 ACEVIILDVRVPC-----------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP-----RAIEDPI 313 (349)
Q Consensus 250 ~~~i~v~d~~~~~-----------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~-----~~~~~~~ 313 (349)
..+|.++|+.+.. ..+..+.. ......++|+|+| +..++.-.|+.|.+||+.... ......+
T Consensus 298 s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi 375 (595)
T 1fwx_A 298 SPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIK 375 (595)
T ss_dssp SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEE
T ss_pred CCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeE
Confidence 4479999998521 12233332 3457889999999 646777789999999997621 0112344
Q ss_pred EEEeccCCce-----EEEEEcCCCCceEEEEc
Q psy17688 314 LAYTAAGGEI-----NQIQWGATQPDWIAICY 340 (349)
Q Consensus 314 ~~~~~~~~~v-----~~~~~~~~~~~l~~~~~ 340 (349)
..+..|-.+- .++..+|||++|+++..
T Consensus 376 ~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 376 DKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 5555543321 33466899999888766
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.81 E-value=4.6e-05 Score=71.34 Aligned_cols=282 Identities=10% Similarity=0.020 Sum_probs=162.4
Q ss_pred eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEE
Q psy17688 25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRV 103 (349)
Q Consensus 25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~v 103 (349)
|.++...+ +|. |-+|+. ++.|..|+.. ++++...........|.++...+++. +.++..+ -+.+
T Consensus 175 i~~i~~d~--~g~--lwigt~----~~Gl~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~g~-----lwigt~~~Gl~~ 239 (795)
T 4a2l_A 175 IASTLYRQ--GDQ--IYIGTS----TDGLYTYSIT--QKTFEKVIPILGTKQIQAILQQSPTR-----IWVATEGAGLFL 239 (795)
T ss_dssp CEEEEEEE--TTE--EEEEES----SSCEEEEETT--TCCEEECC----CCCEEEEEEEETTE-----EEEEEBSSCEEE
T ss_pred eEEEEECC--CCC--EEEEEC----CCCEEEEeCC--CCeEEEecCCCCCCeeEEEEEcCCCC-----EEEEECCCCeEE
Confidence 77777776 776 455665 5557777654 23332221112345788988888775 5555444 7888
Q ss_pred EECCCCCchhheeccCC--CCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688 104 WRAGEPETRLECILNNN--KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181 (349)
Q Consensus 104 w~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
|+..+.... ...... ........|.++...+ ++ .|..|+.+ -|.+||..+++...-. .... ....-...
T Consensus 240 ~~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~d~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~-~~~~---~~~~l~~~ 310 (795)
T 4a2l_A 240 INPKTKEIK--NYLHSPSNPKSISSNYIRSLAMDS-QN-RLWIGTFN-DLNIYHEGTDSFASYS-SNPV---ENGSLSQR 310 (795)
T ss_dssp EETTTTEEE--EECCCTTCTTSCSCSBEEEEEECT-TS-CEEEEESS-CEEEEETTTTEEEEEC-CCTT---STTSCSSS
T ss_pred EeCCCCeEE--EeecCCCCccccCCCeEEEEEEcC-CC-CEEEEeCC-hhheEcCCCCeEEEEe-cCCC---CCCCCCCC
Confidence 998765321 111110 0111235688888764 44 45556665 5888998766543100 0000 00011235
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee----CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE----DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD 257 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d 257 (349)
.|.++...+++ .+-.|+.++-|..||............ .-....|.++..++ ++. |.+|+.+++ |..||
T Consensus 311 ~i~~i~~D~~g----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~-lWiGt~~~G-l~~~~ 383 (795)
T 4a2l_A 311 SVRSIFMDSQG----GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKN-LWIGTNDGG-LNLYN 383 (795)
T ss_dssp CEEEEEECTTS----CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSC-EEEEESSSC-EEEEC
T ss_pred cEEEEEEeCCc----CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCC-EEEEECCCC-eEEEc
Confidence 68899888877 456677777888998765432211111 01235688898886 554 555777765 99999
Q ss_pred ccCCCcceeEee---------cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-----ccCCce
Q psy17688 258 VRVPCTPVARLN---------NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-----AAGGEI 323 (349)
Q Consensus 258 ~~~~~~~~~~~~---------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~v 323 (349)
..+ +. ...+. .....|.++...+++.. |..|+.++-|..||..+.. ...+. .....|
T Consensus 384 ~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~-lWigt~~~Gl~~~d~~~~~------~~~~~~~~~~l~~~~v 454 (795)
T 4a2l_A 384 PIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSL-VYIGTHAGGLSILHRNSGQ------VENFNQRNSQLVNENV 454 (795)
T ss_dssp TTT-CC-EEEECCC------CCSCSCEEEEEEETTTTE-EEEEETTTEEEEEETTTCC------EEEECTTTSCCSCSCE
T ss_pred CCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCCE-EEEEeCcCceeEEeCCCCc------EEEeecCCCCcCCCee
Confidence 875 32 22221 12357889988888874 5556666779999877632 22222 124578
Q ss_pred EEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 324 NQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 324 ~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
.++...+++. |.+++.+ .+.+|+
T Consensus 455 ~~i~~d~~g~-lwigt~~-Gl~~~~ 477 (795)
T 4a2l_A 455 YAILPDGEGN-LWLGTLS-ALVRFN 477 (795)
T ss_dssp EEEEECSSSC-EEEEESS-CEEEEE
T ss_pred EEEEECCCCC-EEEEecC-ceeEEe
Confidence 9999988887 4444444 455554
No 245
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=2.8e-05 Score=66.05 Aligned_cols=222 Identities=9% Similarity=-0.024 Sum_probs=132.3
Q ss_pred EEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 93 LLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 93 ~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
+|..+. ..|+..++..... ....... .....++|++.++.++++-...+.|..+++......
T Consensus 89 ~l~~~~~~~I~~i~~~~~~~--~~~~~~~------~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--------- 151 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSEY--TLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--------- 151 (386)
T ss_dssp EEEEECBSCEEEECTTSCCC--EEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---------
T ss_pred eeEeecCccceeeccCCCcE--EEEecCC------CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---------
Confidence 444444 4888888876532 2222211 356789998745555556556788999998765533
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eC-
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MN- 249 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d- 249 (349)
..+.........+++.+.+. .++++-...+.|.+.++......... .........++++| .+..|+... ..
T Consensus 152 --~~~~~~~~~p~glavd~~~g--~lY~~d~~~~~I~~~~~dg~~~~~l~--~~~l~~P~giavdp-~~g~ly~td~~~~ 224 (386)
T 3v65_B 152 --EVVSTGLESPGGLAVDWVHD--KLYWTDSGTSRIEVANLDGAHRKVLL--WQSLEKPRAIALHP-MEGTIYWTDWGNT 224 (386)
T ss_dssp --EEECSSCSCCCCEEEETTTT--EEEEEETTTTEEEECBTTSCSCEEEE--CSSCSCEEEEEEET-TTTEEEEEECSSS
T ss_pred --EEEeCCCCCccEEEEEeCCC--eEEEEcCCCCeEEEEeCCCCceEEee--cCCCCCCcEEEEEc-CCCeEEEeccCCC
Confidence 12222233567889987552 56677777788999998764433222 12335678999999 555444444 44
Q ss_pred CcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688 250 ACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW 328 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 328 (349)
+ .|..+++.. .....+ ...-...+.|+++|++..+.++-+..+.|..+|+.... ....+........++++
T Consensus 225 ~-~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~giav 296 (386)
T 3v65_B 225 P-RIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITV 296 (386)
T ss_dssp C-EEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-----CEEEECSSCSSEEEEEE
T ss_pred C-EEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-----eEEEEECCCCCceEEEE
Confidence 5 588888763 333333 22334578999999887756666667889999876521 12222222345567777
Q ss_pred cCCCCceEEEEc-CCeEEEee
Q psy17688 329 GATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 329 ~~~~~~l~~~~~-d~~v~vw~ 348 (349)
.. + .++.+.. .+.|..++
T Consensus 297 ~~-~-~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 297 FE-D-SLYWTDWHTKSINSAN 315 (386)
T ss_dssp ET-T-EEEEEETTTTEEEEEE
T ss_pred EC-C-EEEEeeCCCCeEEEEE
Confidence 33 3 3444443 46665543
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.80 E-value=1.2e-05 Score=66.58 Aligned_cols=241 Identities=9% Similarity=-0.070 Sum_probs=138.3
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------------------cCCCCeeEEEEec
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------------------DHPYPTTKIMWIP 84 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~ 84 (349)
....+++|++ +|++ +.++.. ++.|..|+.+ .+.+...... .....+..+++.+
T Consensus 19 ~~p~~i~~d~--~g~~-l~v~~~----~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 19 YAPNSFTFDS--TNKG-FYTSVQ----DGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp SCCCCEECCT--TCSS-EEEECT----TSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred CCceEEEEcC--CCCE-EEEEcC----CCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcC
Confidence 3567788888 8884 667766 7888888654 2222211100 0113578999997
Q ss_pred -CCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---------------
Q psy17688 85 -DRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--------------- 147 (349)
Q Consensus 85 -~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--------------- 147 (349)
++. ++++... .+..++..++.. ...... ...........+++.+.++.+.++-..
T Consensus 90 ~~g~-----l~v~d~~~~i~~~d~~~g~~--~~~~~~-~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 90 QNNQ-----LYIVDCYYHLSVVGSEGGHA--TQLATS-VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp TTTE-----EEEEETTTEEEEECTTCEEC--EEEESE-ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred CCCc-----EEEEECCCCEEEEeCCCCEE--EEeccc-CCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 665 6655444 677887664321 111110 000011235677776524555554322
Q ss_pred --CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccE-EEEEcCCCcEEEEECCCCC--ceeeee
Q psy17688 148 --DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDM-FASVGAEGSVRMFDLRHLE--HSTIIY 222 (349)
Q Consensus 148 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~--~~~~~~ 222 (349)
++.|..+|..+++.. .+.......+.++++|++ +. +++-...+.|..||+.... ....+.
T Consensus 162 ~~~g~v~~~d~~~~~~~------------~~~~~~~~p~gia~~~dg---~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETT------------LLLKELHVPGGAEVSADS---SFVLVAEFLSHQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp CCCEEEEEEETTTTEEE------------EEEEEESCCCEEEECTTS---SEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred CCCceEEEEeCCCCEEE------------EeccCCccCcceEECCCC---CEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence 366888887665543 111112346789999998 54 4555667899999988532 112222
Q ss_pred eCCCCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCC----cceEEEEEeeCCCCEE
Q psy17688 223 EDPQHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHR----ACVNGIAWAPHSSCHI 288 (349)
Q Consensus 223 ~~~~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l 288 (349)
. ... ...+++++ ++++.++... .+ .|..+|.. ++.+..+.... ..++.+.+ .++.. +
T Consensus 227 ~--~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~-~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~-~~g~L-~ 297 (322)
T 2fp8_A 227 K--IPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDP-KGIKFDEF--GNILEVIPLPPPFAGEHFEQIQE-HDGLL-Y 297 (322)
T ss_dssp E--CSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEE-EEEEECTT--SCEEEEEECCTTTTTSCCCEEEE-ETTEE-E
T ss_pred e--CCC-CCCeEECC-CCCEEEEecCcccccccCCCcc-EEEEECCC--CCEEEEEECCCCCccccceEEEE-eCCEE-E
Confidence 2 123 78899999 7776655544 34 48888764 56666655432 34666666 34543 6
Q ss_pred EEEcCCCcEEEEEeec
Q psy17688 289 CTAGDDHQALIWDIQQ 304 (349)
Q Consensus 289 ~~~~~d~~v~iwd~~~ 304 (349)
++...++.|..+++..
T Consensus 298 v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECSSCSEEEEEEC--
T ss_pred EeecCCCceEEEeccc
Confidence 6666778899998765
No 247
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=4.4e-05 Score=63.90 Aligned_cols=222 Identities=9% Similarity=-0.029 Sum_probs=130.9
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++.+....|+..+++.... ....... .....++|++.++.++.+-...+.|..+++......
T Consensus 47 ll~~~~~~I~~i~~~g~~~--~~~~~~~------~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------- 108 (349)
T 3v64_C 47 LLFANRIDIRQVLPHRSEY--TLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------- 108 (349)
T ss_dssp EEEECBSCEEEECTTSCCE--EEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------
T ss_pred eEeecccceEEEeCCCCee--EEeecCC------CceEEEEEeccccEEEEEeccCCceEEEecCCCCce----------
Confidence 4444334787777765432 2222211 346789999745555555556788999998765433
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-Cc
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-AC 251 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~ 251 (349)
............+++.+.+. +++++-...+.|.+.++......... ...-.....++++|.++.++.+-... +
T Consensus 109 -~~~~~~~~~p~glavd~~~g--~ly~~d~~~~~I~~~~~dG~~~~~l~--~~~l~~P~~iavdp~~g~ly~td~~~~~- 182 (349)
T 3v64_C 109 -EVVSTGLESPGGLAVDWVHD--KLYWTDSGTSRIEVANLDGAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTP- 182 (349)
T ss_dssp -EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE--CTTCSCEEEEEEETTTTEEEEEECSSSC-
T ss_pred -EEEeCCCCCccEEEEecCCC--eEEEEcCCCCeEEEEcCCCCceEEEE--eCCCCCcceEEEecCcCeEEEeccCCCC-
Confidence 12222234567889987552 66677777889999998865433222 12335678999999444444444444 5
Q ss_pred EEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 252 EVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
.|..+++.. .....+ ...-...+.|+++|++..+.++-...+.|..+|+.... .............++++.
T Consensus 183 ~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-----~~~~~~~~~~~P~giav~- 254 (349)
T 3v64_C 183 RIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITVF- 254 (349)
T ss_dssp EEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSSCSSEEEEEEE-
T ss_pred EEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-----eEEEEeCCCCCceEEEEE-
Confidence 588888763 333333 22234578999999887746666667889999876522 122222223455677773
Q ss_pred CCCceEEEEc-CCeEEEe
Q psy17688 331 TQPDWIAICY-NKYLEVL 347 (349)
Q Consensus 331 ~~~~l~~~~~-d~~v~vw 347 (349)
.+ .++.+.. .+.|..+
T Consensus 255 ~~-~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 255 ED-SLYWTDWHTKSINSA 271 (349)
T ss_dssp TT-EEEEEETTTTEEEEE
T ss_pred CC-EEEEecCCCCeEEEE
Confidence 33 3444443 4566544
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=1.3e-06 Score=68.68 Aligned_cols=189 Identities=15% Similarity=0.193 Sum_probs=115.6
Q ss_pred EecCCCC--eeEEEEecCCCCCCCcEEEEeC--C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688 70 TIDHPYP--TTKIMWIPDRKGVFPDLLATSG--D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG 143 (349)
Q Consensus 70 ~~~~~~~--v~~~~~~~~~~~~~~~~l~~~~--~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (349)
.+.|... ...+.|+ ++. ++.+.+ + .|+++|+++++......+.. ..+. -.++.. .+.+.+
T Consensus 36 ~~phd~~~ftqGL~~~-~~~-----LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~Fg---eGit~~--g~~ly~ 101 (262)
T 3nol_A 36 SYPHDTKAFTEGFFYR-NGY-----FYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFG---EGISDW--KDKIVG 101 (262)
T ss_dssp EEECCTTCEEEEEEEE-TTE-----EEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCE---EEEEEE--TTEEEE
T ss_pred EecCCCCcccceEEEE-CCE-----EEEECCCCCCceEEEEECCCCcEEEEEecCC---ccce---eEEEEe--CCEEEE
Confidence 4455544 4889998 554 555554 2 89999999886433322211 1111 123332 334445
Q ss_pred EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
..-.++.+.++|..+.+.+. .+.... .-..+ ++++ ..|+.+..++.|.++|..+.+....+..
T Consensus 102 ltw~~~~v~v~D~~t~~~~~-----------ti~~~~-eG~gl--t~dg---~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVR-----------SFNYDG-EGWGL--THND---QYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EESSSSEEEEEETTTCCEEE-----------EEECSS-CCCCE--EECS---SCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEeeCCEEEEEECccCcEEE-----------EEECCC-CceEE--ecCC---CEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 55568899999999998884 333221 22344 4566 4566556678899999998876555433
Q ss_pred CCCC---CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC------------CcceEEEEEeeCCCCEE
Q psy17688 224 DPQH---TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH------------RACVNGIAWAPHSSCHI 288 (349)
Q Consensus 224 ~~~~---~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~------------~~~v~~~~~~p~~~~~l 288 (349)
.... ..++.+.|. ++.+.+..-.++ .|.+.|.++ ++.+..+... ..-.+.|+|+|+++.++
T Consensus 165 ~~~g~~~~~lNELe~~--~G~lyan~w~~~-~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 165 TAHGEELPELNELEWV--DGEIFANVWQTN-KIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp EETTEECCCEEEEEEE--TTEEEEEETTSS-EEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred ccCCccccccceeEEE--CCEEEEEEccCC-eEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 2222 234557776 565554443455 699999987 7776665431 13458999999998866
Q ss_pred EEEcC
Q psy17688 289 CTAGD 293 (349)
Q Consensus 289 ~~~~~ 293 (349)
+||-.
T Consensus 241 VTGK~ 245 (262)
T 3nol_A 241 VTGKL 245 (262)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 66643
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.78 E-value=3.2e-06 Score=66.38 Aligned_cols=181 Identities=10% Similarity=0.009 Sum_probs=120.3
Q ss_pred eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR 208 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~ 208 (349)
...+.|+ ++.++.+.+.+|.|+++|+.+++.+. .+ -..........+.+. .+.+..-.++.+.
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~-----------~~--l~~~~FgeGit~~g~--~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVW-----------ME--RLGNIFAEGLASDGE--RLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSE-----------EE--ECTTCCEEEEEECSS--CEEEEESSSCEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEe-----------EE--CCCCcceeEEEEeCC--EEEEEEccCCEEE
Confidence 3567775 46777888888999999999999874 22 112333322233442 5666677889999
Q ss_pred EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--CCc---ceEEEEEeeC
Q psy17688 209 MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--HRA---CVNGIAWAPH 283 (349)
Q Consensus 209 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~---~v~~~~~~p~ 283 (349)
+||..+.+....+... ..-..+++ ++..|+.+..++ .|.++|..+ .+.+.++.. +.. .++.+.|. +
T Consensus 120 V~D~~Tl~~~~ti~~~---~eGwGLt~---Dg~~L~vSdGs~-~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 120 TWSGMPPQRERTTRYS---GEGWGLCY---WNGKLVRSDGGT-MLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp EEETTTTEEEEEEECS---SCCCCEEE---ETTEEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEECCcCcEEEEEeCC---CceeEEec---CCCEEEEECCCC-EEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-C
Confidence 9999998766655432 22345554 566777776677 699999987 666666543 222 34677877 6
Q ss_pred CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEcCCCCceEEEEcC
Q psy17688 284 SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWGATQPDWIAICYN 341 (349)
Q Consensus 284 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d 341 (349)
|+. .+..-.++.|.+.|.++++. +..+.. -....+.|+|+|+++.|++++..
T Consensus 191 G~l-yanvw~s~~I~vIDp~TG~V-----~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 191 GVI-YANIWHSSDVLEIDPATGTV-----VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TEE-EEEETTCSEEEEECTTTCBE-----EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CEE-EEEECCCCeEEEEeCCCCcE-----EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 653 66655678899999887432 232221 12467899999998888888763
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.77 E-value=3.6e-06 Score=66.11 Aligned_cols=182 Identities=13% Similarity=0.150 Sum_probs=118.1
Q ss_pred eeEEEecCCCCCeEEEEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688 129 LTSFDWNEVDPNLLGTSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS 206 (349)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~ 206 (349)
...+.|+ ++.++.+.+.+| .|+.+|+.+++...+ ... ..........+.+. .+.+..-.++.
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~-----------~~l-~~~~FgeGit~~g~--~ly~ltw~~~~ 108 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQ-----------IEL-GKRYFGEGISDWKD--KIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEE-----------EEC-CTTCCEEEEEEETT--EEEEEESSSSE
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEE-----------Eec-CCccceeEEEEeCC--EEEEEEeeCCE
Confidence 4567786 456777777776 899999999998843 222 12333332333442 55666667899
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC--C---cceEEEEEe
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH--R---ACVNGIAWA 281 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~--~---~~v~~~~~~ 281 (349)
+.+||..+.+....+... ..-..++ + ++..|+.+...+ .|.++|..+ .+.+.++... . ..++.+.|.
T Consensus 109 v~v~D~~t~~~~~ti~~~---~eG~glt--~-dg~~L~~SdGs~-~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYD---GEGWGLT--H-NDQYLIMSDGTP-VLRFLDPES-LTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEEEETTTCCEEEEEECS---SCCCCEE--E-CSSCEEECCSSS-EEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEECccCcEEEEEECC---CCceEEe--c-CCCEEEEECCCC-eEEEEcCCC-CeEEEEEEeccCCccccccceeEEE
Confidence 999999998876665432 2223444 4 556666666566 699999987 6666665432 1 234567776
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------------CCceEEEEEcCCCCceEEEEcC
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------------GGEINQIQWGATQPDWIAICYN 341 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~d 341 (349)
+|+. .+..-.++.|.+.|.++++. +..+... ....+.|+|+|+++.|++++..
T Consensus 181 -~G~l-yan~w~~~~I~vIDp~tG~V-----~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 181 -DGEI-FANVWQTNKIVRIDPETGKV-----TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp -TTEE-EEEETTSSEEEEECTTTCBE-----EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred -CCEE-EEEEccCCeEEEEECCCCcE-----EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6653 66665688899999887432 2322220 2356899999998888888764
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.77 E-value=1.3e-05 Score=65.80 Aligned_cols=245 Identities=10% Similarity=0.036 Sum_probs=135.9
Q ss_pred cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688 11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF 90 (349)
Q Consensus 11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 90 (349)
...+.+..|..+.....++|+| +|++ +++... ++.|..|+.+ +.... .......+..+++.++++
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~--~g~l-yv~d~~----~~~I~~~d~~---g~~~~--~~~~~~~p~gia~~~dG~--- 84 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAP--DGTI-FVTNHE----VGEIVSITPD---GNQQI--HATVEGKVSGLAFTSNGD--- 84 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---CCEEE--EEECSSEEEEEEECTTSC---
T ss_pred CCceEeEeCCCCCCcceEEECC--CCCE-EEEeCC----CCeEEEECCC---CceEE--EEeCCCCceeEEEcCCCc---
Confidence 4455667776667788999998 8873 444434 7888777654 33222 223345789999999997
Q ss_pred CcEEEEeC--Cc--EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce-eeee
Q psy17688 91 PDLLATSG--DY--LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV-VGRV 165 (349)
Q Consensus 91 ~~~l~~~~--~~--i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~ 165 (349)
++++.. +. |..++..+++.. ....... . .....++..+ .+..+++-..++.|..+|..+++. +...
T Consensus 85 --l~vad~~~~~~~v~~~d~~~g~~~--~~~~~~~-~---~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~ 155 (306)
T 2p4o_A 85 --LVATGWNADSIPVVSLVKSDGTVE--TLLTLPD-A---IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLE 155 (306)
T ss_dssp --EEEEEECTTSCEEEEEECTTSCEE--EEEECTT-C---SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred --EEEEeccCCcceEEEEcCCCCeEE--EEEeCCC-c---cccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEE
Confidence 666553 24 555665555421 1111111 0 1223333333 444444444578888888765421 1000
Q ss_pred cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCc--eeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688 166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEH--STIIYEDPQHTPLLRLAWNKQDPNY 242 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~~ 242 (349)
... ... ..........+.+ +|++. .++++-...+.|..+|+.. ++. ....... .....+++++ ++++
T Consensus 156 ~~~-~~~-~~~~~~~~~pngi--s~dg~--~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~-dG~l 225 (306)
T 2p4o_A 156 HPM-LAR-SNSESVFPAANGL--KRFGN--FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDV-EGNL 225 (306)
T ss_dssp CGG-GSC-SSTTCCSCSEEEE--EEETT--EEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBT-TCCE
T ss_pred CCc-ccc-ccccCCCCcCCCc--CcCCC--EEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECC-CCCE
Confidence 000 000 0000111234455 77763 4666667788999999875 221 1112111 3467789999 7877
Q ss_pred EEEEeeCCcEEEEEeccCCCcce--eEeecCCcceEEEEEe---eCCCCEEEEEc
Q psy17688 243 LAMVAMNACEVIILDVRVPCTPV--ARLNNHRACVNGIAWA---PHSSCHICTAG 292 (349)
Q Consensus 243 l~~~~~d~~~i~v~d~~~~~~~~--~~~~~~~~~v~~~~~~---p~~~~~l~~~~ 292 (349)
+++....+ .|.++|.. ++.. ..+...-...++++|. |++..++++..
T Consensus 226 ~va~~~~~-~V~~~~~~--G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 226 YGATHIYN-SVVRIAPD--RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECBTTC-CEEEECTT--CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEeCCCC-eEEEECCC--CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 66555566 49999975 3332 2233223568999998 88887444443
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.72 E-value=4.5e-05 Score=60.23 Aligned_cols=199 Identities=10% Similarity=0.092 Sum_probs=128.4
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS 206 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~ 206 (349)
..+..++|+|..+.++++...++.|...|.. ++..+++ .+.+ ......+++.+++ .++++.-.++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i---------~l~g-~~D~EGIa~~~~g---~~~vs~E~~~~ 92 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI---------PLDF-VKDLETIEYIGDN---QFVISDERDYA 92 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE---------ECSS-CSSEEEEEECSTT---EEEEEETTTTE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE---------ecCC-CCChHHeEEeCCC---EEEEEECCCCc
Confidence 5789999998444566667888899999987 6665321 1222 2457888888877 66677667788
Q ss_pred EEEEECCCCCce---eeee----eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CCcceeEee-------c
Q psy17688 207 VRMFDLRHLEHS---TIIY----EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARLN-------N 270 (349)
Q Consensus 207 v~iwd~~~~~~~---~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~~-------~ 270 (349)
+.++++...... .... ........-.++|+| .++.|+++.+... ..+|.+.. ....+..+. .
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhcccc
Confidence 999988764421 1111 112345578999999 6766776776653 56665541 111222221 1
Q ss_pred CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC---------CceEEEEEcCCCCceEEEEcC
Q psy17688 271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG---------GEINQIQWGATQPDWIAICYN 341 (349)
Q Consensus 271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d 341 (349)
+...+..++++|....+++.......+..+|.+.. ++..+.-.. ...-.|+|.++|. |..++.-
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~ 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP 243 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC------EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC------EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC
Confidence 23457899999987776777777888888887652 222222211 2557899999997 6666777
Q ss_pred CeEEEee
Q psy17688 342 KYLEVLR 348 (349)
Q Consensus 342 ~~v~vw~ 348 (349)
+.+++|+
T Consensus 244 n~~y~f~ 250 (255)
T 3qqz_A 244 NRFYRFT 250 (255)
T ss_dssp TEEEEEE
T ss_pred ceEEEEE
Confidence 7776664
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=1.2e-05 Score=73.40 Aligned_cols=237 Identities=12% Similarity=0.008 Sum_probs=134.1
Q ss_pred EEEEeCC-cEEEEECCCCCchhheeccCCC--CCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceee
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILNNNK--NSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVG 163 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~ 163 (349)
+++...+ .|..+|..+++........... ......++ + .+..++++.. +|.|..+|..+++.+.
T Consensus 120 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~--v-----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 120 VYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR--V-----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE--E-----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 4444446 9999999988654433221111 00111122 1 2345555543 5899999999999987
Q ss_pred eecccCCceeee------------e--------eccCCceeeEEEecCCCCccEEEEEcCCC------------------
Q psy17688 164 RVNSVSGHVKTQ------------L--------IAHDKEVYDIAFSRAGGGRDMFASVGAEG------------------ 205 (349)
Q Consensus 164 ~~~~~~~~~~~~------------~--------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~------------------ 205 (349)
+.....+.+... . .++......+++.|.. .+++.++.++
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~---~~vy~~~~~g~~w~~~~~~~~~gd~l~~ 269 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL---DLLYVGTGNGSPWNREVRSPGGGDNLYL 269 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC---CEEEEeCCCCCccccCCCCCCCCCceee
Confidence 654211110000 0 0111223357888877 6888887765
Q ss_pred -cEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCCC---eEEEEeeCCcEEEEEeccCCCcceeEeecCC--
Q psy17688 206 -SVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDPN---YLAMVAMNACEVIILDVRVPCTPVARLNNHR-- 272 (349)
Q Consensus 206 -~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-- 272 (349)
.|..+|.++++..-......+. .+........ ++. .++.++.+| .++++|..+ ++.+.......
T Consensus 270 ~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~l~~~~~~~~~ 346 (668)
T 1kv9_A 270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNG-FFYVLDRTN-GKLISAEKFGKVT 346 (668)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSCCC
T ss_pred eeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCC-EEEEEECCC-CCEeccccccccc
Confidence 3999999998866555433222 2332233333 443 688889999 699999987 66653322111
Q ss_pred ----------cce------------------------EEEEEeeCCCCEEEE----------------------------
Q psy17688 273 ----------ACV------------------------NGIAWAPHSSCHICT---------------------------- 290 (349)
Q Consensus 273 ----------~~v------------------------~~~~~~p~~~~~l~~---------------------------- 290 (349)
.++ ..++++|+... +..
T Consensus 347 w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~-~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 347 WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGL-VYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTE-EEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred cccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCE-EEEeccccceEeeeeccccccccccccCccc
Confidence 000 12567776554 332
Q ss_pred --------EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 291 --------AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 291 --------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
...+|.|..||+.+++ .+-.+.. ..+.....+...+..+++++.|+.+++|+.
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQK-----AAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cccCCCCCCCccceEEEEeCCCCc-----EEEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhh
Confidence 1134789999988743 2333333 334444445556667888888999999873
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.68 E-value=2e-05 Score=72.03 Aligned_cols=187 Identities=9% Similarity=0.109 Sum_probs=111.5
Q ss_pred EEEecCCCCCeEEEEEcCC-------------------eEEEEeccCcceeeeecccCCceeeeeeccC-------Ccee
Q psy17688 131 SFDWNEVDPNLLGTSSIDT-------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-------KEVY 184 (349)
Q Consensus 131 ~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~ 184 (349)
.++++| ..++++.++.++ .|..+|..+++.....+. ..|. .+..
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~---------~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV---------TPGDSWDFTATQQIT 303 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES---------STTCCSCCCCCSCEE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec---------CCCccccccCCCCcE
Confidence 356766 667888887766 399999999998864321 1121 2222
Q ss_pred eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----------CCC------------------------ce
Q psy17688 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----------QHT------------------------PL 230 (349)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~------------------------~v 230 (349)
...+..++.....++.++.+|.++++|.++++......... ... .-
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 22333345111268899999999999999987552221110 000 01
Q ss_pred eEEEEeCCCCCeEEEEe------------------------------------eCCcEEEEEeccCCCcceeEeecCCcc
Q psy17688 231 LRLAWNKQDPNYLAMVA------------------------------------MNACEVIILDVRVPCTPVARLNNHRAC 274 (349)
Q Consensus 231 ~~~~~~~~~~~~l~~~~------------------------------------~d~~~i~v~d~~~~~~~~~~~~~~~~~ 274 (349)
..++++| +..++++.. .++ .|..||+.+ ++.+.+...+ .+
T Consensus 384 ~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g-~l~A~D~~t-G~~~W~~~~~-~~ 459 (668)
T 1kv9_A 384 HSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSG-ALLAWDPVK-QKAAWKVPYP-TH 459 (668)
T ss_dssp SCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEE-EEEEEETTT-TEEEEEEEES-SS
T ss_pred CcceECC-CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccc-eEEEEeCCC-CcEEEEccCC-CC
Confidence 2367888 555555421 225 599999987 7777766543 33
Q ss_pred eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce-EEEEEcCCCCceEE
Q psy17688 275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI-NQIQWGATQPDWIA 337 (349)
Q Consensus 275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~ 337 (349)
.....+...+.. ++.++.|+.++.||.+++ +.+..++...+.. .-+.+..+|+..++
T Consensus 460 ~~~~~~~t~gg~-vf~g~~dg~l~a~d~~tG-----~~l~~~~~~~~~~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 460 WNGGTLSTAGNL-VFQGTAAGQMHAYSADKG-----EALWQFEAQSGIVAAPMTFELAGRQYVA 517 (668)
T ss_dssp CCCCEEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CcCceeEeCCCE-EEEECCcccchhhhhhcC-----hhheEecCCCCcccCceEEEECCEEEEE
Confidence 344455566776 888899999999999884 3455555422111 22344456654443
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.67 E-value=5.7e-05 Score=62.48 Aligned_cols=243 Identities=12% Similarity=0.090 Sum_probs=135.4
Q ss_pred CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCC------------CCCCCcCceeEEEecCCCCCe
Q psy17688 76 PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNN------------KNSDFCAPLTSFDWNEVDPNL 141 (349)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~~ 141 (349)
...+++|.+++. ++.++. + .|..|+..+............ ...........+++.+ +...
T Consensus 20 ~p~~i~~d~~g~-----~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~ 93 (322)
T 2fp8_A 20 APNSFTFDSTNK-----GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQ 93 (322)
T ss_dssp CCCCEECCTTCS-----SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTE
T ss_pred CceEEEEcCCCC-----EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC-CCCc
Confidence 467788999876 555555 4 888888765432110000000 0000113467888875 3445
Q ss_pred EEEEEcCCeEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEec-CCCCccEEEEEcC----------------
Q psy17688 142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSR-AGGGRDMFASVGA---------------- 203 (349)
Q Consensus 142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~l~~~~~---------------- 203 (349)
|+.+...+.|..+|..++.... + ..... ........+++.+ ++ +++++-..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~~~-~-------~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHATQ-L-------ATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp EEEEETTTEEEEECTTCEECEE-E-------ESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTC
T ss_pred EEEEECCCCEEEEeCCCCEEEE-e-------cccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccC
Confidence 6666555668888876554321 0 00011 1113468899999 88 66665432
Q ss_pred -CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCC-cceeEeecCCcceEEEEE
Q psy17688 204 -EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPC-TPVARLNNHRACVNGIAW 280 (349)
Q Consensus 204 -d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~ 280 (349)
++.|..+|..+++....... ......++++| ++..|+++. ..+ .|.+|++.... .....+....+ ...+++
T Consensus 163 ~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~-dg~~lyv~d~~~~-~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 163 KTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSA-DSSFVLVAEFLSH-QIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp CCEEEEEEETTTTEEEEEEEE---ESCCCEEEECT-TSSEEEEEEGGGT-EEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred CCceEEEEeCCCCEEEEeccC---CccCcceEECC-CCCEEEEEeCCCC-eEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 36788899876543222211 13456799999 888666664 456 59999987411 11122211223 788999
Q ss_pred eeCCCCEEEEEcC----------CCcEEEEEeecCCCCCCCcEEEEeccC----CceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688 281 APHSSCHICTAGD----------DHQALIWDIQQMPRAIEDPILAYTAAG----GEINQIQWGATQPDWIAICYNKYLEV 346 (349)
Q Consensus 281 ~p~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~v~v 346 (349)
.++|.. .++... .+.|..+|... +.+..+.... ..+..+++ .++..+++...++.|.+
T Consensus 237 d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G------~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 237 NADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFG------NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp CTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTS------CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEE
T ss_pred CCCCCE-EEEecCcccccccCCCccEEEEECCCC------CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEE
Confidence 999975 444433 35577776532 2334444322 34666766 35554444445688888
Q ss_pred eeC
Q psy17688 347 LRV 349 (349)
Q Consensus 347 w~v 349 (349)
+++
T Consensus 309 ~~~ 311 (322)
T 2fp8_A 309 LVY 311 (322)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.65 E-value=0.00011 Score=60.63 Aligned_cols=225 Identities=6% Similarity=-0.029 Sum_probs=132.3
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
+|.+....|+..+++............. ....+++|++.++.++.+-...+.|..+++.......
T Consensus 7 ll~~~~~~I~~i~l~~~~~~~~~~~~~~------~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--------- 71 (318)
T 3sov_A 7 LLYANRRDLRLVDATNGKENATIVVGGL------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--------- 71 (318)
T ss_dssp EEEECEEEEEEEETTCTTSCCEEEEEEE------EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC---------
T ss_pred EEEEccCeEEEEECCCCceEEEEEecCC------CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE---------
Confidence 4444444899999986531112222211 2456899987455555665667889999887653210
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--CC
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM--NA 250 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~ 250 (349)
..+.........+++.+.+. +++++-...+.|.++++......... . ........++++| .+..|+.... .+
T Consensus 72 -~~~~~~l~~p~glavd~~~g--~ly~~d~~~~~I~~~~~dG~~~~~l~-~-~~~~~P~giavdp-~~g~ly~td~~~~~ 145 (318)
T 3sov_A 72 -NVVVSGLLSPDGLACDWLGE--KLYWTDSETNRIEVSNLDGSLRKVLF-W-QELDQPRAIALDP-SSGFMYWTDWGEVP 145 (318)
T ss_dssp -EEEEECCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE-C-SSCSSEEEEEEEG-GGTEEEEEECSSSC
T ss_pred -EEEcCCCCCccEEEEEcCCC--eEEEEECCCCEEEEEECCCCcEEEEE-e-CCCCCccEEEEeC-CCCEEEEEecCCCC
Confidence 11222234567889987542 66677677889999998764332222 1 2335678999999 5555555542 45
Q ss_pred cEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688 251 CEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG 329 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 329 (349)
.|...++. +.....+ ...-...+.|+++|++..+..+=+..+.|..+|+.... .............++++.
T Consensus 146 -~I~r~~~d--G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 146 -KIERAGMD--GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-----RQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp -EEEEEETT--SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSCCSCEEEEEEE
T ss_pred -EEEEEEcC--CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-----eEEEecCCCCCceEEEEe
Confidence 58888876 3333333 22234568999999877745665667889999886522 122222223455667765
Q ss_pred CCCCceEEEEc-CCeEEEee
Q psy17688 330 ATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 330 ~~~~~l~~~~~-d~~v~vw~ 348 (349)
.+ .++.+.. .+.|..++
T Consensus 218 ~~--~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 218 ED--ILYWTDWSTHSILACN 235 (318)
T ss_dssp TT--EEEEEETTTTEEEEEE
T ss_pred CC--EEEEEecCCCeEEEEE
Confidence 33 3443333 45665543
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.65 E-value=9.2e-06 Score=63.83 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=117.6
Q ss_pred EecCCCC--eeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688 70 TIDHPYP--TTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS 145 (349)
Q Consensus 70 ~~~~~~~--v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (349)
.+.|... ...+.|+. +. ++.+.+ + .|+++|+++++..... +.. ..+ --.+++. ...+.+..
T Consensus 48 ~~phd~~~ftqGL~~~~-~~-----Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---~~F---geGit~~--g~~Ly~lt 112 (268)
T 3nok_A 48 EYPHATNAFTQGLVFHQ-GH-----FFESTGHQGTLRQLSLESAQPVWME-RLG---NIF---AEGLASD--GERLYQLT 112 (268)
T ss_dssp EEECCTTCCEEEEEEET-TE-----EEEEETTTTEEEECCSSCSSCSEEE-ECT---TCC---EEEEEEC--SSCEEEEE
T ss_pred EEcCCCccccceEEEEC-CE-----EEEEcCCCCEEEEEECCCCcEEeEE-CCC---Ccc---eeEEEEe--CCEEEEEE
Confidence 3445443 47888874 33 555555 3 8999999988644333 221 111 1224442 34555556
Q ss_pred EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688 146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP 225 (349)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 225 (349)
-.++.+.+||..+.+.+. .+... ..-..++ +++ ..|+.+..++.|.++|..+.+....+....
T Consensus 113 w~~~~v~V~D~~Tl~~~~-----------ti~~~-~eGwGLt--~Dg---~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRER-----------TTRYS-GEGWGLC--YWN---GKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp SSSCEEEEEETTTTEEEE-----------EEECS-SCCCCEE--EET---TEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred ccCCEEEEEECCcCcEEE-----------EEeCC-CceeEEe--cCC---CEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 678999999999999884 33321 2234454 456 566666678999999999987655443322
Q ss_pred CCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCEEE
Q psy17688 226 QHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCHIC 289 (349)
Q Consensus 226 ~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~l~ 289 (349)
... .++.+.|. ++.+++..-..+ .|.+.|.++ ++.+..+... ..-.+.|+++|+++.+++
T Consensus 176 ~g~~v~~lNeLe~~--dG~lyanvw~s~-~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 176 RGQPVELINELECA--NGVIYANIWHSS-DVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp TTEECCCEEEEEEE--TTEEEEEETTCS-EEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred CCcccccccccEEe--CCEEEEEECCCC-eEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence 222 34667777 565444443455 699999987 7766665421 135689999999888677
Q ss_pred EEcC
Q psy17688 290 TAGD 293 (349)
Q Consensus 290 ~~~~ 293 (349)
||-.
T Consensus 252 TGK~ 255 (268)
T 3nok_A 252 TGKL 255 (268)
T ss_dssp EETT
T ss_pred eCCC
Confidence 7653
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.63 E-value=0.00012 Score=60.30 Aligned_cols=224 Identities=10% Similarity=0.018 Sum_probs=131.1
Q ss_pred cEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc---ceeeeeccc
Q psy17688 92 DLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN---QVVGRVNSV 168 (349)
Q Consensus 92 ~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~ 168 (349)
.+|.+..+.|+..+++..+.. .+... .....+++|++.++.++++-..++.|..+++... ....
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~--~~~~~------~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~----- 69 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD----- 69 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCE--EEECS------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE-----
T ss_pred EEEEECCCeEEEEECCCcceE--ehhcC------CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE-----
Confidence 355555568999998875422 22221 1356789998744455555556789999998752 1110
Q ss_pred CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
..+.........+++.+.+. +++++-...+.|.+.|+......... . ........++++| .+..|+....
T Consensus 70 -----~~~~~~~~~p~glavd~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~-~-~~~~~P~~iavdp-~~g~ly~~d~ 139 (316)
T 1ijq_A 70 -----TVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLF-R-ENGSKPRAIVVDP-VHGFMYWTDW 139 (316)
T ss_dssp -----EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSSSEEEEE-E-CTTCCEEEEEEET-TTTEEEEEEC
T ss_pred -----EEEeCCCCCcCEEEEeecCC--eEEEEECCCCEEEEEeCCCCceEEEE-E-CCCCCcceEEeCC-CCCEEEEEcc
Confidence 11222224567899987542 56666677889999998764333222 2 2235678999999 5555544443
Q ss_pred -C-CcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCce
Q psy17688 249 -N-ACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEI 323 (349)
Q Consensus 249 -d-~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v 323 (349)
. + .|..+++. +.....+. ..-.....++++|++..+.++-+..+.|..+|+..... ...... .....
T Consensus 140 ~~~~-~I~~~~~d--G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-----~~~~~~~~~~~~P 211 (316)
T 1ijq_A 140 GTPA-KIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDEKRLAHP 211 (316)
T ss_dssp SSSC-EEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEECTTTTSSE
T ss_pred CCCC-eEEEEcCC--CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-----EEEeecCCccCCc
Confidence 3 5 58888875 33333332 22356789999998877456666678899999875211 111221 12345
Q ss_pred EEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688 324 NQIQWGATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 324 ~~~~~~~~~~~l~~~~~-d~~v~vw~ 348 (349)
.++++.. + .++.+.. .+.|..++
T Consensus 212 ~giav~~-~-~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 212 FSLAVFE-D-KVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEEET-T-EEEEEETTTTEEEEEE
T ss_pred EEEEEEC-C-EEEEEECCCCeEEEEe
Confidence 6777753 3 3444443 46666553
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.63 E-value=2.1e-05 Score=61.27 Aligned_cols=189 Identities=15% Similarity=0.140 Sum_probs=116.6
Q ss_pred EecCCC--CeeEEEEecCCCCCCCcEEEEeCC----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688 70 TIDHPY--PTTKIMWIPDRKGVFPDLLATSGD----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG 143 (349)
Q Consensus 70 ~~~~~~--~v~~~~~~~~~~~~~~~~l~~~~~----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (349)
.+.|.. -...+.|++ +. ++.+.+. .|+.+|+.+++......+... .+. -.++.. .+.++.
T Consensus 14 ~~phd~~~ftqGL~~~~-~~-----LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fg---eGi~~~--~~~ly~ 79 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLR-GH-----LYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFG---AGIVAW--RDRLIQ 79 (243)
T ss_dssp EEECCTTCCEEEEEEET-TE-----EEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCE---EEEEEE--TTEEEE
T ss_pred EcCCCCccccccEEEEC-CE-----EEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cce---eEEEEe--CCEEEE
Confidence 345543 366899987 33 5555442 899999998864332222211 111 123332 345555
Q ss_pred EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
..-.++.+.++|..+.+.+. .+... ..-..++ +++ ..|+.+..++.|.++|..+.+....+..
T Consensus 80 ltw~~~~v~v~D~~tl~~~~-----------ti~~~-~~Gwglt--~dg---~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRA-----------RFRYP-GEGWALT--SDD---SHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EESSSSEEEEEETTTTEEEE-----------EEECS-SCCCEEE--ECS---SCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEeeCCEEEEEECCcCcEEE-----------EEeCC-CCceEEe--eCC---CEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 56678999999999998884 33322 2223444 556 4555556688999999999876554433
Q ss_pred CCCC---CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCE
Q psy17688 224 DPQH---TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCH 287 (349)
Q Consensus 224 ~~~~---~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~ 287 (349)
.... ..++.+.|. ++.+++..-... .|.+.|.++ ++.+..+... ..-.+.|+++|+++.+
T Consensus 143 ~~~g~~~~~lNeLe~~--~G~lyanvw~s~-~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l 218 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV--NGELLANVWLTS-RIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL 218 (243)
T ss_dssp EETTEECCCEEEEEEE--TTEEEEEETTTT-EEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred ccCCcccccceeeEEe--CCEEEEEECCCC-eEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence 2222 234567776 555554443455 699999998 7766665421 1356899999998886
Q ss_pred EEEEcC
Q psy17688 288 ICTAGD 293 (349)
Q Consensus 288 l~~~~~ 293 (349)
++||-.
T Consensus 219 fVTGK~ 224 (243)
T 3mbr_X 219 FVTGKR 224 (243)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 777654
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=3.3e-05 Score=71.73 Aligned_cols=198 Identities=13% Similarity=0.094 Sum_probs=111.3
Q ss_pred CeeEEEEe-cCCCCCCCcEEEEeC-----C--cEEEEECCCC-CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688 76 PTTKIMWI-PDRKGVFPDLLATSG-----D--YLRVWRAGEP-ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS 146 (349)
Q Consensus 76 ~v~~~~~~-~~~~~~~~~~l~~~~-----~--~i~vw~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (349)
.+...+|| ||++ +||-.. + .|+++|+.++ +.. ...+. .....+.|+| +++.|+...
T Consensus 175 ~~~~~~~S~PDG~-----~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~--------~~~~~~~Wsp-Dg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-----LVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS--------GTNGEIVWGP-DHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTC-----EEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE--------EECSCCEECS-STTEEEEEE
T ss_pred EEeeeEecCCCCC-----EEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc--------CceeeEEEec-CCCEEEEEE
Confidence 57889999 9998 666432 2 5999999886 421 11111 1234688998 877777666
Q ss_pred cC-----CeEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCc
Q psy17688 147 ID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH 217 (349)
Q Consensus 147 ~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~ 217 (349)
.+ ..|..+++.+++... ...+. ........+.|+|++ ++|+..+ ....|.++|+.++..
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~---------~lv~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSED---------VCLYEEHNPLFSAFMYKAADT---NTLCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGC---------EEEEECCCTTCEEEEEECTTS---SEEEEEEECSSCEEEEEEESSSCTT
T ss_pred ECCCCCCCEEEEEECCCCchhc---------EEEEecCCCceEEEEEECCCC---CEEEEEecCCCCceEEEEECCCCCC
Confidence 65 257788887654210 01122 222345678999999 6666544 234688899987531
Q ss_pred ee--eeeeCCCCCceeEEEEeCCCCCeEEEEeeC--Cc-EEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEE
Q psy17688 218 ST--IIYEDPQHTPLLRLAWNKQDPNYLAMVAMN--AC-EVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTA 291 (349)
Q Consensus 218 ~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~-~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~ 291 (349)
.. ............++.|+. ++.+++....+ +. .|..+|+... ..... +..+...+.--.+++.+..++++.
T Consensus 308 ~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~~~~lv~~~ 385 (751)
T 2xe4_A 308 HNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVRSNYLVVAG 385 (751)
T ss_dssp CCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEECSSEEEEEE
T ss_pred CceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEECCEEEEEE
Confidence 11 111122334556666654 44455554443 21 3666676531 22233 333443333233455566767788
Q ss_pred cCCCcEEEEEe
Q psy17688 292 GDDHQALIWDI 302 (349)
Q Consensus 292 ~~d~~v~iwd~ 302 (349)
..++..++|-+
T Consensus 386 ~~~g~~~l~~~ 396 (751)
T 2xe4_A 386 RRAGLTRIWTM 396 (751)
T ss_dssp EETTEEEEEEE
T ss_pred EeCCEEEEEEE
Confidence 88886555543
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.62 E-value=8.1e-06 Score=74.60 Aligned_cols=283 Identities=6% Similarity=-0.082 Sum_probs=140.5
Q ss_pred eEEEeecCCCceEEEEEeeeccc-----CC--eEEEEeccccccccccceEec--CCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688 27 SMNWSVRPDKLFRLAIGSYVEEY-----NN--KVQIVALNEDISEFGPKSTID--HPYPTTKIMWIPDRKGVFPDLLATS 97 (349)
Q Consensus 27 ~~~~sp~~~~~~~la~g~~~~~~-----~g--~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~l~~~ 97 (349)
++++.| .+++. ++.|+...+. .+ .+.+|+.. +++........ +.....++++..++. +++.|
T Consensus 190 ~~av~~-~~g~l-~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~-----lyv~G 260 (656)
T 1k3i_A 190 AAAIEP-TSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQ-----IVVTG 260 (656)
T ss_dssp EEEEET-TTTEE-EEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSC-----EEEEC
T ss_pred eEEEEe-cCCEE-EEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCC-----EEEeC
Confidence 455554 26774 7777652211 11 45666554 44444333322 233344577888888 88888
Q ss_pred C-C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cC-----CeEEEEeccCcceeeeeccc
Q psy17688 98 G-D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-ID-----TTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 98 ~-~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~ 168 (349)
+ + .+.+||..+....... ..... ..-.++...+ ++++++.|+ .+ ..+.+||..+.+-... ...
T Consensus 261 G~~~~~v~~yd~~t~~W~~~~--~~~~~----R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~ 332 (656)
T 1k3i_A 261 GNDAKKTSLYDSSSDSWIPGP--DMQVA----RGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNA 332 (656)
T ss_dssp SSSTTCEEEEEGGGTEEEECC--CCSSC----CSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTS
T ss_pred CCCCCceEEecCcCCceeECC--CCCcc----ccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCc
Confidence 7 3 8999998876422111 11110 1112233333 788999988 34 5689999987664311 000
Q ss_pred CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC---------CcEEEEECCCCCceeeeeeCC-------CCCceeE
Q psy17688 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE---------GSVRMFDLRHLEHSTIIYEDP-------QHTPLLR 232 (349)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~-------~~~~v~~ 232 (349)
...+... ..+. ..+..++ ..++.++.+ ..+..||..+........... ....-.+
T Consensus 333 ~~~p~~~-~~~~-----~~~~~~~---~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 333 KVNPMLT-ADKQ-----GLYRSDN---HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp CSGGGCC-CCTT-----GGGTTTC---SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred ccccccc-cccc-----ceeecCC---ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence 0000000 0000 1111223 344444433 457889988765332221111 0112345
Q ss_pred EEEeCCCCCeEEEEeeCC-------c---EEEEEeccCCCcceeEe--ecCCcc-eEEEEEeeCCCCEEEEEcCC-----
Q psy17688 233 LAWNKQDPNYLAMVAMNA-------C---EVIILDVRVPCTPVARL--NNHRAC-VNGIAWAPHSSCHICTAGDD----- 294 (349)
Q Consensus 233 ~~~~~~~~~~l~~~~~d~-------~---~i~v~d~~~~~~~~~~~--~~~~~~-v~~~~~~p~~~~~l~~~~~d----- 294 (349)
+.|...++.++++|+.++ . .+.+||..+ ..-.... ..+... -.+....|+++. ++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i-~v~GG~~~~~~~ 481 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGST-FITGGQRRGIPF 481 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCE-EEECCBSBCCTT
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCE-EEECCcccCcCc
Confidence 555554778888887532 0 377777764 2211111 112222 234456678887 8888754
Q ss_pred ------CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688 295 ------HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY 340 (349)
Q Consensus 295 ------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 340 (349)
..+.+||..+..-.. +..............+.|+++.+++++.
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~---~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYK---QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEE---CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCCceee---cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468899987632100 0000011112234556788886666664
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.60 E-value=5.3e-05 Score=58.99 Aligned_cols=183 Identities=12% Similarity=0.054 Sum_probs=116.6
Q ss_pred ceeEEEecCCCCCeEEEEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG 205 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~ 205 (349)
-...+.|+. +.++.+.+.+| .|+.+|+.+++...+ ..-. .........+.+. .+.+..-.++
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~-----------~~l~-~~~fgeGi~~~~~--~ly~ltw~~~ 85 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQR-----------AEVP-PPYFGAGIVAWRD--RLIQLTWRNH 85 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEE-----------EECC-TTCCEEEEEEETT--EEEEEESSSS
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEE-----------EeCC-CCcceeEEEEeCC--EEEEEEeeCC
Confidence 455788864 55666666654 899999999998843 2211 1222222223332 5666667889
Q ss_pred cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-----cceEEEEE
Q psy17688 206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-----ACVNGIAW 280 (349)
Q Consensus 206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-----~~v~~~~~ 280 (349)
.+.+||..+.+....+... ..-..++ + ++..|+++..++ .|.++|..+ .+.+.++.... ..++.+.|
T Consensus 86 ~v~v~D~~tl~~~~ti~~~---~~Gwglt--~-dg~~L~vSdgs~-~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYP---GEGWALT--S-DDSHLYMSDGTA-VIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp EEEEEETTTTEEEEEEECS---SCCCEEE--E-CSSCEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEEEECCcCcEEEEEeCC---CCceEEe--e-CCCEEEEECCCC-eEEEEeCCC-CeEEEEEEEccCCcccccceeeEE
Confidence 9999999998766665432 2234554 3 556666666677 699999987 66666654321 24556676
Q ss_pred eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEcCCCCceEEEEcC
Q psy17688 281 APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWGATQPDWIAICYN 341 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d 341 (349)
. +|+. ++..-.+..|.+.|.++++. +..+.. -....+.|+|+|++..|++++..
T Consensus 158 ~-~G~l-yanvw~s~~I~vIDp~tG~V-----~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 158 V-NGEL-LANVWLTSRIARIDPASGKV-----VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp E-TTEE-EEEETTTTEEEEECTTTCBE-----EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred e-CCEE-EEEECCCCeEEEEECCCCCE-----EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5 5553 65555677889998887432 222221 12467899999998888888763
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00018 Score=67.23 Aligned_cols=283 Identities=12% Similarity=0.041 Sum_probs=157.2
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-------e------cCCCCeeEEEEecCCCCC
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-------I------DHPYPTTKIMWIPDRKGV 89 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-------~------~~~~~v~~~~~~~~~~~~ 89 (349)
..|+++...+ +|. |-+|+. .+-|.+++... +.+..... . -....|.++...+++.
T Consensus 258 ~~i~~i~~d~--~g~--lWigt~----~~Gl~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-- 325 (781)
T 3v9f_A 258 SYIFSIKQLK--DNK--LWIATE----LNGIMILDLQQ--NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-- 325 (781)
T ss_dssp CCEEEEEECT--TSE--EEEEES----SSCEEEEETTC--C---------CEEECBCSSTTSBSSSCEEEEEECSSCC--
T ss_pred ceEEEEEECC--CCC--EEEEeC----CCCeEEECCCC--CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--
Confidence 4577777665 775 666765 56677776543 22221111 0 1235689998888775
Q ss_pred CCcEEEEe-CCcEEEEECCCCCchhheecc--CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 90 FPDLLATS-GDYLRVWRAGEPETRLECILN--NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 90 ~~~~l~~~-~~~i~vw~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
+-+.. .+-|..++............. ..........|.++...+ + ..|-.|+.++-|..||..++....-.
T Consensus 326 ---lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~-g~lWigt~~~Gl~~~~~~~~~~~~~~- 399 (781)
T 3v9f_A 326 ---IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-Q-GKLWIGTDGGGINVFENGKRVAIYNK- 399 (781)
T ss_dssp ---EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-T-SCEEEEEBSSCEEEEETTEEEEECC--
T ss_pred ---EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-C-CCEEEEeCCCcEEEEECCCCeEEEcc-
Confidence 44444 348888887654321110000 001111225688887754 3 45667776677888998765432100
Q ss_pred ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688 167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 246 (349)
.........|.++...+++ . |..|+.++-|..+|.++++.............|.++...+ ++. |..|
T Consensus 400 -------~~~~~~~~~v~~i~~d~~g---~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lwig 466 (781)
T 3v9f_A 400 -------ENRELLSNSVLCSLKDSEG---N-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKK-IWIG 466 (781)
T ss_dssp -----------CCCSBEEEEEECTTS---C-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSE-EEEE
T ss_pred -------CCCCCCCcceEEEEECCCC---C-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCC-EEEE
Confidence 0001233568888887776 4 4556766778999987654322211012346788888876 554 5555
Q ss_pred eeCCcEEEEEeccCCCcceeEeecC-----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec---
Q psy17688 247 AMNACEVIILDVRVPCTPVARLNNH-----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--- 318 (349)
Q Consensus 247 ~~d~~~i~v~d~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--- 318 (349)
+..| +..||..+ ++........ ...|.++...++|.. ..|+.++-+..||.... ....+..
T Consensus 467 t~~G--l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~~~Gl~~~~~~~~------~~~~~~~~~~ 535 (781)
T 3v9f_A 467 THAG--VFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRF--WIGTFGGGVGIYTPDMQ------LVRKFNQYEG 535 (781)
T ss_dssp ETTE--EEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCE--EEEESSSCEEEECTTCC------EEEEECTTTT
T ss_pred ECCc--eEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCE--EEEEcCCCEEEEeCCCC------eEEEccCCCC
Confidence 5544 99999875 3322221111 357899988888874 44444344777876542 1222321
Q ss_pred -cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 319 -AGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 319 -~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
....|.++...++|..++ ++.+|-+..|+
T Consensus 536 l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d 565 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWL-ATGEGLVCFPS 565 (781)
T ss_dssp CSCSCEEEEEECTTSCEEE-EETTEEEEESC
T ss_pred CCCCeeEEEEECCCCCEEE-EECCCceEEEC
Confidence 135788999988887444 44455435543
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.54 E-value=0.00011 Score=63.29 Aligned_cols=236 Identities=8% Similarity=0.064 Sum_probs=131.3
Q ss_pred CeeEEEEecC---CCCCCCcEEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---
Q psy17688 76 PTTKIMWIPD---RKGVFPDLLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID--- 148 (349)
Q Consensus 76 ~v~~~~~~~~---~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--- 148 (349)
....++|.|+ +. ++++-. ..|+.++..++.. ..... .......++|++ +++++++....
T Consensus 140 ~P~gvavd~~s~~g~-----Lyv~D~~~~I~~id~~~g~v--~~~~~------~~~~P~giavd~-dG~lyVad~~~~~~ 205 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDD-----LYWVGQRDAFRHVDFVNQYV--DIKTT------NIGQCADVNFTL-NGDMVVVDDQSSDT 205 (433)
T ss_dssp CCCEEEECTTTTTCE-----EEEECBTSCEEEEETTTTEE--EEECC------CCSCEEEEEECT-TCCEEEEECCSCTT
T ss_pred CCceEEEccccCCCE-----EEEEeCCCCEEEEECCCCEE--EEeec------CCCCccEEEECC-CCCEEEEcCCCCcc
Confidence 4678899985 43 555544 3888888866532 11111 114567899997 77754444321
Q ss_pred C-eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688 149 T-TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ 226 (349)
Q Consensus 149 g-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 226 (349)
. .+...+....... ...+. .......++++| ++ .++++-..++.|+.+|..++.....+.....
T Consensus 206 ~~gv~~~~~~~~~~~----------~~~~~-~~~~P~giavd~~~G---~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~ 271 (433)
T 4hw6_A 206 NTGIYLFTRASGFTE----------RLSLC-NARGAKTCAVHPQNG---KIYYTRYHHAMISSYDPATGTLTEEEVMMDT 271 (433)
T ss_dssp SEEEEEECGGGTTCC----------EEEEE-ECSSBCCCEECTTTC---CEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred cceEEEEECCCCeec----------ccccc-ccCCCCEEEEeCCCC---eEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence 1 1333332221110 01111 234567899999 55 6666666788999999986654222222222
Q ss_pred CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc---eeEeecC---------------CcceEEEEE--------
Q psy17688 227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP---VARLNNH---------------RACVNGIAW-------- 280 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~---------------~~~v~~~~~-------- 280 (349)
......++|+| +++.|+++......|+.+++...... ...+.+. -.....+++
T Consensus 272 ~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~ 350 (433)
T 4hw6_A 272 KGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAG 350 (433)
T ss_dssp CSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTT
T ss_pred CCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccc
Confidence 23335799999 88866666554336999886531111 1122211 123567888
Q ss_pred -eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------------------CCceEEEEEc-CCCCceEEEEc
Q psy17688 281 -APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------------------GGEINQIQWG-ATQPDWIAICY 340 (349)
Q Consensus 281 -~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~~-~~~~~l~~~~~ 340 (349)
.+++.. +++-...+.|+.++... .+..+.+. -.....|+++ +++..+++=..
T Consensus 351 dd~~g~l-yvaD~~n~~I~~~~~~G-------~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 351 EEDEYDF-YFCDRDSHTVRVLTPEG-------RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp SSCCEEE-EEEETTTTEEEEECTTS-------EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred cCCCCcE-EEEECCCCEEEEECCCC-------CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 556654 66666677888887422 12222211 1236789999 56654444444
Q ss_pred CCeEEEee
Q psy17688 341 NKYLEVLR 348 (349)
Q Consensus 341 d~~v~vw~ 348 (349)
++.|+.++
T Consensus 423 n~rIr~i~ 430 (433)
T 4hw6_A 423 NHRVRKIA 430 (433)
T ss_dssp GTEEEEEE
T ss_pred CCEEEEEe
Confidence 68888765
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.51 E-value=0.00027 Score=57.90 Aligned_cols=228 Identities=8% Similarity=0.044 Sum_probs=130.4
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--e
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--T 150 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~ 150 (349)
.....++|++++. ++++.. + .|..|+.+... ...... ......+++.+ +++++++..... .
T Consensus 32 ~~pegia~~~~g~-----lyv~d~~~~~I~~~d~~g~~---~~~~~~------~~~p~gia~~~-dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 32 TFLENLASAPDGT-----IFVTNHEVGEIVSITPDGNQ---QIHATV------EGKVSGLAFTS-NGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEECTTSC-----EEEEETTTTEEEEECTTCCE---EEEEEC------SSEEEEEEECT-TSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCC-----EEEEeCCCCeEEEECCCCce---EEEEeC------CCCceeEEEcC-CCcEEEEeccCCcce
Confidence 4678899999887 777764 4 88888876531 111111 13577899987 777655544322 4
Q ss_pred EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-e------e
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-Y------E 223 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~------~ 223 (349)
|..+|..+++.... ... ........++..+.+ ..+++-..++.|..+|...++..... . .
T Consensus 97 v~~~d~~~g~~~~~---------~~~-~~~~~~~g~~~~~~~---~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~ 163 (306)
T 2p4o_A 97 VVSLVKSDGTVETL---------LTL-PDAIFLNGITPLSDT---QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSN 163 (306)
T ss_dssp EEEEECTTSCEEEE---------EEC-TTCSCEEEEEESSSS---EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSS
T ss_pred EEEEcCCCCeEEEE---------EeC-CCccccCcccccCCC---cEEEEECCCCeEEEEeCCCCcEeEEEECCcccccc
Confidence 66677766664311 011 111223444444544 55666556889999998754211110 0 0
Q ss_pred -CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688 224 -DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300 (349)
Q Consensus 224 -~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw 300 (349)
...-.....+ +| ++..|+++....+.|..||+...+.. ...+.. ......++++++|.. +++....+.|.++
T Consensus 164 ~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l-~va~~~~~~V~~~ 238 (306)
T 2p4o_A 164 SESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNL-YGATHIYNSVVRI 238 (306)
T ss_dssp TTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCE-EEECBTTCCEEEE
T ss_pred ccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCE-EEEeCCCCeEEEE
Confidence 0111234455 77 66666666544336999998642211 112211 134567899999975 6666667889999
Q ss_pred EeecCCCCCCCcEEE--EeccCCceEEEEEc---CCCCceEEEEcC
Q psy17688 301 DIQQMPRAIEDPILA--YTAAGGEINQIQWG---ATQPDWIAICYN 341 (349)
Q Consensus 301 d~~~~~~~~~~~~~~--~~~~~~~v~~~~~~---~~~~~l~~~~~d 341 (349)
|... +.... +.......++++|. |++..|++++..
T Consensus 239 ~~~G------~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 239 APDR------STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CTTC------CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCC------CEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 8642 11111 12213568999999 887777776653
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.50 E-value=0.00037 Score=59.13 Aligned_cols=221 Identities=9% Similarity=-0.051 Sum_probs=128.2
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA 127 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 127 (349)
.+.|+.++++. ..... .......+..++|.+.+.. ++.+-. . .|..++++.... ........ .
T Consensus 95 ~~~I~~i~~~~--~~~~~--~~~~~~~~~gl~~d~~~~~----ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~-----~ 159 (386)
T 3v65_B 95 RIDIRQVLPHR--SEYTL--LLNNLENAIALDFHHRREL----VFWSDVTLDRILRANLNGSNV--EEVVSTGL-----E 159 (386)
T ss_dssp BSCEEEECTTS--CCCEE--EECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCCE--EEEECSSC-----S
T ss_pred CccceeeccCC--CcEEE--EecCCCccEEEEEecCCCe----EEEEeCCCCcEEEEecCCCCc--EEEEeCCC-----C
Confidence 35566665542 22221 2234456889999986652 444443 3 888898876531 11111111 1
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-Cc
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GS 206 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~ 206 (349)
....+++.+..+.++++-...+.|.+.++...... ..+.........++++|.+. .++++-... +.
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~-----------~l~~~~l~~P~giavdp~~g--~ly~td~~~~~~ 226 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-----------VLLWQSLEKPRAIALHPMEG--TIYWTDWGNTPR 226 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-----------EEECSSCSCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-----------EeecCCCCCCcEEEEEcCCC--eEEEeccCCCCE
Confidence 23456666545566666666778888887654332 12223335678999998762 455555455 78
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
|..+++.......... ..-.....++++| ++..|+.+......|..+|+.. ......+.........|++ ..+ .
T Consensus 227 I~r~~~dG~~~~~~~~--~~~~~PnGlavd~-~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~-~ 300 (386)
T 3v65_B 227 IEASSMDGSGRRIIAD--THLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-S 300 (386)
T ss_dssp EEEEETTSCSCEEEEC--SSCSCEEEEEEEG-GGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETT-E
T ss_pred EEEEeCCCCCcEEEEE--CCCCCeeeEEEeC-CCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECC-E
Confidence 9999987644333221 2234578999998 5555555554433699999864 2222223323345677887 333 4
Q ss_pred EEEEEcCCCcEEEEEeec
Q psy17688 287 HICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~ 304 (349)
++.+-...+.|..+|..+
T Consensus 301 ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEeeCCCCeEEEEECCC
Confidence 466766778888887444
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=0.00088 Score=62.60 Aligned_cols=287 Identities=10% Similarity=-0.005 Sum_probs=155.2
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------cCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------DHPYPTTKIMWIPDRKGVFPDLLAT 96 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~l~~ 96 (349)
..|.++...+ +|. |-+|+. + -|.+|+.. ++++...... -....|.++...+++. +.+.
T Consensus 211 ~~i~~i~~d~--~g~--lwigt~----~-Gl~~~d~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-----lWig 274 (781)
T 3v9f_A 211 NDVRCIYKDT--NGN--IWIGTS----K-GLALFNAN--TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-----LWIA 274 (781)
T ss_dssp SSEEEEEECT--TCC--EEEEET----T-EEEEEETT--TTEEEC-----------CCCCEEEEEECTTSE-----EEEE
T ss_pred CceeEEEEcC--CCC--EEEEeC----C-cHheECCC--CCcEEEEEcCCCccccccCceEEEEEECCCCC-----EEEE
Confidence 3577777554 675 555665 4 57777653 3333222111 1235699998888875 5444
Q ss_pred eC-CcEEEEECCCCCchhhee-------ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688 97 SG-DYLRVWRAGEPETRLECI-------LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 97 ~~-~~i~vw~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (349)
.. +-|.+++..+........ ............|.++...+ ++ .|-.|+.++-|..++..+..... +...
T Consensus 275 t~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~lWigt~~~Gl~~~~~~~~~~~~-~~~~ 351 (781)
T 3v9f_A 275 TELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-NIWIGTWGGGINFISNAPPTFHT-WSYS 351 (781)
T ss_dssp ESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SC-CEEEEEBSSCEEEECSSCCSCEE-EC--
T ss_pred eCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CC-CEEEEecCCeEEEeCCCCCccee-eccC
Confidence 44 488889887654221111 00001112235688888764 44 56677777788888877654321 0000
Q ss_pred CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-eCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-EDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
... ..........|.++...+++ .|..|+.++-|..||..+........ .......|.++...+ ++. |.+|+
T Consensus 352 ~~~-~~~~~l~~~~v~~i~~d~~g----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt 424 (781)
T 3v9f_A 352 PTQ-MNESSLSNKVVSSVCDDGQG----KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGT 424 (781)
T ss_dssp --C-CCSSCCSSSCEEEEEECTTS----CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEE
T ss_pred ccc-cccCCCCCcceEEEEEcCCC----CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEe
Confidence 000 00001123458888887776 45566666678899987542211110 012335688888876 555 44566
Q ss_pred eCCcEEEEEeccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-----
Q psy17688 248 MNACEVIILDVRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA----- 319 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~----- 319 (349)
.+++ +..+|.++ ++ ...+. .....|.++...+++.. ..|+. +-|..||..+... .......
T Consensus 425 ~~~G-l~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~l--wigt~-~Gl~~~~~~~~~~-----~~~~~~~~~~~~ 493 (781)
T 3v9f_A 425 YLGN-ISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKKI--WIGTH-AGVFVIDLASKKV-----IHHYDTSNSQLL 493 (781)
T ss_dssp TTEE-EEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSEE--EEEET-TEEEEEESSSSSC-----CEEECTTTSSCS
T ss_pred ccCC-EEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCCE--EEEEC-CceEEEeCCCCeE-----EecccCcccccc
Confidence 6554 99998865 32 22232 13467888888877764 44444 4588888765321 1111111
Q ss_pred CCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688 320 GGEINQIQWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw 347 (349)
...|.++...++|..+ +++.++.|..|
T Consensus 494 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~ 520 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFW-IGTFGGGVGIY 520 (781)
T ss_dssp CSCEEEEEECTTCCEE-EEESSSCEEEE
T ss_pred cceeEEEEEcCCCCEE-EEEcCCCEEEE
Confidence 3578999999988744 44543334444
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.45 E-value=0.00059 Score=61.18 Aligned_cols=176 Identities=11% Similarity=0.071 Sum_probs=98.0
Q ss_pred CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-
Q psy17688 149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ- 226 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~- 226 (349)
+.|..+|..+++....++..... ...+.....++. +... .++.....++.++.+|.++++|.++++..........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d-~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPND-AWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTC-CSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCC-cccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCc
Confidence 58999999999988643211000 000000111221 1111 2441013688899999999999998875433222110
Q ss_pred ----------CC--------------------------------ceeEEEEeCCCCCeEEEEee----------------
Q psy17688 227 ----------HT--------------------------------PLLRLAWNKQDPNYLAMVAM---------------- 248 (349)
Q Consensus 227 ----------~~--------------------------------~v~~~~~~~~~~~~l~~~~~---------------- 248 (349)
.. .-..++++| ...++++...
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g 447 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ-DTGLFYVPANHWKEDYWTEEVSYTKG 447 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT-TTCCEEEEEECEEEEEEECCCCCCTT
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC-CCCEEEEechhcceeeecccccccCC
Confidence 00 012457777 4444444332
Q ss_pred -----------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688 249 -----------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED 311 (349)
Q Consensus 249 -----------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 311 (349)
++ .|..||+.+ ++.+.+.... .++..-.....+.. ++.++.|+.++.||.+++ +
T Consensus 448 ~~~~g~~~~~~p~~~~~~G-~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~taggl-vf~g~~dg~l~A~D~~tG-----~ 518 (582)
T 1flg_A 448 SAYLGMGFRIKRMYDDHVG-SLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNL-VFTGTGDGYFKAFDAKSG-----K 518 (582)
T ss_dssp SCCCCEEEEEEESCSSCSE-EEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTE-EEEECTTSEEEEEETTTC-----C
T ss_pred CceeccceeecCCCCCCcc-eEEEEECCC-CCEEEEecCC-CCCcccceEeCCCE-EEEECCCCcEEEEECCCC-----C
Confidence 45 589999987 7766665532 22222222334555 777999999999999984 4
Q ss_pred cEEEEeccCCceE--EEEEcCCCCceEE
Q psy17688 312 PILAYTAAGGEIN--QIQWGATQPDWIA 337 (349)
Q Consensus 312 ~~~~~~~~~~~v~--~~~~~~~~~~l~~ 337 (349)
.+-.++. ...+. -+.|..+|+.+++
T Consensus 519 ~lW~~~~-~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 519 ELWKFQT-GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EEEEEEC-SSCCCSCCEEEEETTEEEEE
T ss_pred EEEEecC-CCCcccCceEEEECCEEEEE
Confidence 4666665 33332 2667677765444
No 269
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.42 E-value=0.00014 Score=65.05 Aligned_cols=176 Identities=10% Similarity=0.024 Sum_probs=97.4
Q ss_pred eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP---- 225 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---- 225 (349)
.|..+|..+++.+...+...... ..+.....++. +...+++.....++.++.+|.++++|.++++.........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~-~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDE-WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCS-SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcc-cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 58999999998875432110000 00001112221 2222344100257788899999999999987554332211
Q ss_pred -------CCCce--------------------------eEEEEeCCCCCeEEEEee------------------------
Q psy17688 226 -------QHTPL--------------------------LRLAWNKQDPNYLAMVAM------------------------ 248 (349)
Q Consensus 226 -------~~~~v--------------------------~~~~~~~~~~~~l~~~~~------------------------ 248 (349)
...++ ..++++| +..++++...
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCccccccc
Confidence 00111 3467888 6666666542
Q ss_pred -------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEE
Q psy17688 249 -------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILA 315 (349)
Q Consensus 249 -------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 315 (349)
++ .|..||..+ ++.+.++... ..+....+...+.. ++.++.||.|+.+|.+++ +.+..
T Consensus 430 ~~~~~~~~~~~~~~g-~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~-v~~g~~dg~l~a~D~~tG-----~~lw~ 500 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMG-QIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGL-VWYATLDGYLKALDNKDG-----KELWN 500 (571)
T ss_dssp EEEECTTSTTSCCCE-EEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTE-EEEECTTSEEEEEETTTC-----CEEEE
T ss_pred eeccCccccCCCCCC-eEEEEECCC-CCEEEEecCC-CCccceeEEECCCE-EEEEcCCCeEEEEECCCC-----CEEEE
Confidence 35 589999887 7766666532 22333333444565 777899999999999884 34555
Q ss_pred EeccCCc-eEEEEEcCCCCceEE
Q psy17688 316 YTAAGGE-INQIQWGATQPDWIA 337 (349)
Q Consensus 316 ~~~~~~~-v~~~~~~~~~~~l~~ 337 (349)
+...... -.-+.+..++..+++
T Consensus 501 ~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 501 FKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EECSSCCCSCCEEEEETTEEEEE
T ss_pred EeCCCCcEeeeEEEEECCEEEEE
Confidence 5542211 122345567764443
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00058 Score=56.20 Aligned_cols=177 Identities=11% Similarity=-0.020 Sum_probs=106.4
Q ss_pred CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC---CceeeeeeCC
Q psy17688 149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL---EHSTIIYEDP 225 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~ 225 (349)
..|+..|+.+.+.. . +......+.+++|++.+. .++++-...+.|..+|+... .....+.. .
T Consensus 10 ~~I~~i~~~~~~~~-----------~-~~~~~~~p~g~~~d~~~~--~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-~ 74 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT-----------S-LIPNLRNVVALDTEVASN--RIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-R 74 (316)
T ss_dssp SSEEEEETTSCCCE-----------E-EECSCSSEEEEEEETTTT--EEEEEETTTTEEEEEEC--------CEEEEC-S
T ss_pred CeEEEEECCCcceE-----------e-hhcCCCceEEEEEEeCCC--EEEEEECCCCcEEEEECCCCCCCcccEEEEe-C
Confidence 56888898876554 1 222345678999998652 56666667789999998861 12122221 1
Q ss_pred CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCC-CcEEEEEee
Q psy17688 226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDD-HQALIWDIQ 303 (349)
Q Consensus 226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d-~~v~iwd~~ 303 (349)
.-.....+++++.++.++++-...+ .|.++|+.. .....+ ...-.....++++|.+..++.+.... +.|...++.
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~-~I~~~~~~g--~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLG-TVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTT-EEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCcCEEEEeecCCeEEEEECCCC-EEEEEeCCC--CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 2234578899873444444445566 699999864 323332 32335678999999777645554333 678777765
Q ss_pred cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688 304 QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~ 348 (349)
... ........-.....+++++++..|+.+.. .+.|..++
T Consensus 152 G~~-----~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 152 GVD-----IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 192 (316)
T ss_dssp SCC-----EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCC-----eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence 411 11112222346789999997777776665 46777765
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=7.5e-05 Score=69.32 Aligned_cols=195 Identities=12% Similarity=0.056 Sum_probs=108.5
Q ss_pred ceeEEEec-CCCCCeEEEEEc-CC----eEEEEeccCc-ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEE
Q psy17688 128 PLTSFDWN-EVDPNLLGTSSI-DT----TCTIWCLETN-QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS 200 (349)
Q Consensus 128 ~i~~~~~~-~~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 200 (349)
.+....|| | ++++||.+.. +| .|+++|+.++ +.+. ..+.. ....++|+|++ +.|+.
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----------~~~~~---~~~~~~WspDg---~~l~y 237 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----------DKVSG---TNGEIVWGPDH---TSLFY 237 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----------CCEEE---ECSCCEECSST---TEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----------ccccC---ceeeEEEecCC---CEEEE
Confidence 56788999 8 8887775543 33 4999999988 6331 11111 24578999998 56665
Q ss_pred EcCC-----CcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeC--CcEEEEEeccCCCcce--eEee-
Q psy17688 201 VGAE-----GSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN--ACEVIILDVRVPCTPV--ARLN- 269 (349)
Q Consensus 201 ~~~d-----~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~~i~v~d~~~~~~~~--~~~~- 269 (349)
...+ ..|+++++.++... ..+...........+.|+| ++++|+..... ...|.++|+....... ..+.
T Consensus 238 ~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 238 VTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 5554 36888898876432 2333323334467889999 88887766532 2268888987632222 3332
Q ss_pred cCCcceEEEEEeeCCCCEEEEEcCC--C--cEEEEEeecCCCCCCCcEEEEeccCC--ceEEEEEcCCCCceEE-EEcCC
Q psy17688 270 NHRACVNGIAWAPHSSCHICTAGDD--H--QALIWDIQQMPRAIEDPILAYTAAGG--EINQIQWGATQPDWIA-ICYNK 342 (349)
Q Consensus 270 ~~~~~v~~~~~~p~~~~~l~~~~~d--~--~v~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~d~ 342 (349)
........+.|+. |..+++....+ + .|..+|+..... .... .+. +.. .+.++.+. +..|+. ...++
T Consensus 317 ~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~--~~~~-li~-~~~~~~l~~~~~~--~~~lv~~~~~~g 389 (751)
T 2xe4_A 317 REKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD--WSHV-LVD-HSEDVFMESIAVR--SNYLVVAGRRAG 389 (751)
T ss_dssp CCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTC--CCCE-EEC-CCSSEEEEEEEEC--SSEEEEEEEETT
T ss_pred CCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc--ceee-EEC-CCCCcEEEEEEEE--CCEEEEEEEeCC
Confidence 2334445555443 55535555544 3 455555543110 1110 122 222 44555554 344544 44566
Q ss_pred eEEEe
Q psy17688 343 YLEVL 347 (349)
Q Consensus 343 ~v~vw 347 (349)
..++|
T Consensus 390 ~~~l~ 394 (751)
T 2xe4_A 390 LTRIW 394 (751)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65554
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.37 E-value=0.00083 Score=57.27 Aligned_cols=189 Identities=12% Similarity=0.071 Sum_probs=114.7
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++.+....|+..+++..... .+... ...+..++|++.++.++.+-...+.|..+++....... ..
T Consensus 86 ll~~~~~~I~~i~l~~~~~~--~~~~~------~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-------~~ 150 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-------SY 150 (400)
T ss_dssp EEEEETTEEEEECTTSCSCE--EEECS------CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C-------CC
T ss_pred eEEeccceeEEEccCCccee--Eeccc------cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-------cc
Confidence 44444458888888765422 22211 14677899997445555555567889888886532100 00
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-e-CC
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-M-NA 250 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~-d~ 250 (349)
.............+++.+.+. +++++-...+.|.+.|+........+. ........++++| .+..|+... . .+
T Consensus 151 ~~~~~~~~~~p~glavD~~~~--~lY~~d~~~~~I~~~~~~g~~~~~l~~--~~~~~P~~iavdp-~~g~ly~td~~~~~ 225 (400)
T 3p5b_L 151 DTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDP-VHGFMYWTDWGTPA 225 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTT--EEEEEETTTTEEEEECTTTCSEEEEEE--CSSCCEEEEEEET-TTTEEEEEECSSSC
T ss_pred eEEEeCCCCCcccEEEEecCC--ceEEEECCCCeEEEEeCCCCceEEEEe--CCCCCcceEEEec-ccCeEEEEeCCCCC
Confidence 012222334678899987542 667777778899999998754333332 2334578999999 555555544 2 35
Q ss_pred cEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 251 CEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.|...++.. .....+ ...-.....|+++|++..+..+=...+.|..+|+..
T Consensus 226 -~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 226 -KIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp -CEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -EEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 488888863 333333 223356799999998887455555677899998865
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00047 Score=54.38 Aligned_cols=211 Identities=9% Similarity=0.035 Sum_probs=122.9
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (349)
..+..++|+| ++.. |.+.+. .++.|..++.+ +++.....+.-......|++.+++. ++++.- + .
T Consensus 27 ~~lSGla~~~--~~~~-L~aV~d---~~~~I~~ld~~---g~v~~~i~l~g~~D~EGIa~~~~g~-----~~vs~E~~~~ 92 (255)
T 3qqz_A 27 NNISSLTWSA--QSNT-LFSTIN---KPAAIVEMTTN---GDLIRTIPLDFVKDLETIEYIGDNQ-----FVISDERDYA 92 (255)
T ss_dssp SCEEEEEEET--TTTE-EEEEEE---TTEEEEEEETT---CCEEEEEECSSCSSEEEEEECSTTE-----EEEEETTTTE
T ss_pred cCcceeEEeC--CCCE-EEEEEC---CCCeEEEEeCC---CCEEEEEecCCCCChHHeEEeCCCE-----EEEEECCCCc
Confidence 5799999998 6653 544333 26666666553 6665554444446788999988885 555543 3 8
Q ss_pred EEEEECCCCCc-hhheecc-CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC---cceeeeecccCCceeee
Q psy17688 101 LRVWRAGEPET-RLECILN-NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET---NQVVGRVNSVSGHVKTQ 175 (349)
Q Consensus 101 i~vw~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~ 175 (349)
+.++++..... ....... .............++|+| .++.|.++.......+|.+.. ...+..... ... .
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~--~~~--~ 167 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD--KAL--Q 167 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC--HHH--H
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecc--hhh--c
Confidence 88888876542 0011111 111112235678999998 666666676665666666541 111100000 000 0
Q ss_pred eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-------CCceeEEEEeCCCCCeEEEEee
Q psy17688 176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-------HTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
-..+...+.+++++|... .+++....++.|..+|.... .......... -...-.|+|.+ ++++++ .++
T Consensus 168 ~~~~~~d~S~l~~dp~tg--~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyI-vsE 242 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKN--TLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYI-VSE 242 (255)
T ss_dssp HTCCSSCCCEEEEETTTT--EEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEE-EET
T ss_pred cccccCCceeEEEcCCCC--eEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECC-CCCEEE-EcC
Confidence 001234578999999764 78888888899999997753 3333322211 13568899999 777444 466
Q ss_pred CCcEEEEEec
Q psy17688 249 NACEVIILDV 258 (349)
Q Consensus 249 d~~~i~v~d~ 258 (349)
.+ .++.+.-
T Consensus 243 ~n-~~y~f~~ 251 (255)
T 3qqz_A 243 PN-RFYRFTP 251 (255)
T ss_dssp TT-EEEEEEC
T ss_pred Cc-eEEEEEe
Confidence 65 5776643
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.34 E-value=0.0018 Score=59.99 Aligned_cols=189 Identities=11% Similarity=0.061 Sum_probs=113.9
Q ss_pred EEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688 93 LLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH 171 (349)
Q Consensus 93 ~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (349)
+|.... ..|+..++..... ..+... ...+..++|.+..+.++++-...+.|+.+++....... .
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~--~~l~~~------~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-------~ 461 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEY--TSLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-------S 461 (791)
T ss_dssp EEEEECBSSEEEECTTSCCC--EEEECS------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------
T ss_pred ccccccccceeEeeccCCcc--eeeecC------CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-------c
Confidence 344444 4888888775432 122221 14567899987455555665666889888887532100 0
Q ss_pred eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eC-
Q psy17688 172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MN- 249 (349)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d- 249 (349)
....+.........|++.+.+. +++++-...+.|.+.++........+. ........|+++| ....|+... ..
T Consensus 462 ~~~vi~~~l~~P~GLAvD~~~~--~LY~tD~~~~~I~v~~ldG~~~~~l~~--~~l~~P~gIaVDp-~~g~LYwtD~g~~ 536 (791)
T 3m0c_C 462 YDTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDP-VHGFMYWTDWGTP 536 (791)
T ss_dssp CEEEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSSSEEEEEE--CTTCCEEEEEEET-TTTEEEEEECSSS
T ss_pred eeEEEecCCCCcceeeeeecCC--cEEEEecCCCeEEEEeCCCCeEEEEEe--CCCCCcceEEEec-CCCCEEEecCCCC
Confidence 0022232345577899987763 566777788899999998654333332 2335688999999 555555544 33
Q ss_pred CcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 250 ACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 250 ~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+ .|...++.. .....+. ..-.....|++++.+..|+++=...+.|...++..
T Consensus 537 ~-~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 537 A-KIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp C-EEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred C-eEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 5 588888863 3333333 23357899999988777455545567888888865
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.34 E-value=0.00088 Score=55.97 Aligned_cols=221 Identities=9% Similarity=-0.051 Sum_probs=128.1
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA 127 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 127 (349)
.+.|+..+++. .... ........+..++|.+.... ++.+-. . .|..++++.... ........ .
T Consensus 52 ~~~I~~i~~~g--~~~~--~~~~~~~~~~~l~~d~~~~~----ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~-----~ 116 (349)
T 3v64_C 52 RIDIRQVLPHR--SEYT--LLLNNLENAIALDFHHRREL----VFWSDVTLDRILRANLNGSNV--EEVVSTGL-----E 116 (349)
T ss_dssp BSCEEEECTTS--CCEE--EEECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCSC--EEEECSSC-----S
T ss_pred ccceEEEeCCC--CeeE--EeecCCCceEEEEEeccccE----EEEEeccCCceEEEecCCCCc--eEEEeCCC-----C
Confidence 34566665542 2222 12233456899999986652 444443 3 888888876532 11111111 2
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-Cc
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GS 206 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~ 206 (349)
....+++.+..+.++++-...+.|.+.++...... ............++++|.+. .++++-... +.
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-----------~l~~~~l~~P~~iavdp~~g--~ly~td~~~~~~ 183 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-----------VLLWQSLEKPRAIALHPMEG--TIYWTDWGNTPR 183 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECTTCSCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE-----------EEEeCCCCCcceEEEecCcC--eEEEeccCCCCE
Confidence 23467776545566666666788999988754332 12223334578999998652 555555555 78
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
|...++.......... ..-.....++++| ++..|+.+......|..+|+.. ......+.........+++ ..+ .
T Consensus 184 I~r~~~dG~~~~~~~~--~~~~~PnGla~d~-~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav-~~~-~ 257 (349)
T 3v64_C 184 IEASSMDGSGRRIIAD--THLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-S 257 (349)
T ss_dssp EEEEETTSCSCEESCC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEE-ETT-E
T ss_pred EEEEeCCCCCcEEEEE--CCCCCcceEEEeC-CCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEE-ECC-E
Confidence 9999987643322221 2234578999999 5666665554433699999864 2222222223345677777 333 4
Q ss_pred EEEEEcCCCcEEEEEeec
Q psy17688 287 HICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~ 304 (349)
++.+-...+.|..+|..+
T Consensus 258 ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 258 LYWTDWHTKSINSANKFT 275 (349)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEecCCCCeEEEEEccC
Confidence 366666677787777433
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.00079 Score=58.00 Aligned_cols=156 Identities=11% Similarity=0.142 Sum_probs=92.1
Q ss_pred CeeEEEEecC-CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC---
Q psy17688 76 PTTKIMWIPD-RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT--- 149 (349)
Q Consensus 76 ~v~~~~~~~~-~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg--- 149 (349)
....++++|+ +.. ++++-.. .|+.++++.... ..+.. .......++|++ +++.|+++.. ++
T Consensus 138 ~P~~lavdp~~~g~----Lyv~d~~~~I~~id~~~~~v--~~~~~------~~~~P~~ia~d~-~G~~lyvad~~~~~~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH----LYLVGEQHPTRLIDFEKEYV--STVYS------GLSKVRTICWTH-EADSMIITNDQNNNDR 204 (430)
T ss_dssp CCCEEEEETTEEEE----EEEEEBTEEEEEEETTTTEE--EEEEC------CCSCEEEEEECT-TSSEEEEEECCSCTTS
T ss_pred CCCEEEECCCCCCe----EEEEeCCCcEEEEECCCCEE--EEEec------CCCCcceEEEeC-CCCEEEEEeCCCCccc
Confidence 4578888873 331 5555444 888888876532 12211 114567899997 7775555544 22
Q ss_pred -eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688 150 -TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH 227 (349)
Q Consensus 150 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 227 (349)
.+.+.+. .+.... ...+. .......++++| ++ .++++-..++.|..+|......... ......
T Consensus 205 ~~v~~~~~-~g~~~~---------~~~l~-~~~~p~giavdp~~g---~lyv~d~~~~~V~~~~~~~~~~~~~-~~~~~~ 269 (430)
T 3tc9_A 205 PNNYILTR-ESGFKV---------ITELT-KGQNCNGAETHPING---ELYFNSWNAGQVFRYDFTTQETTPL-FTIQDS 269 (430)
T ss_dssp EEEEEEEG-GGTSCS---------EEEEE-ECSSCCCEEECTTTC---CEEEEETTTTEEEEEETTTTEEEEE-EECSSS
T ss_pred ceEEEEeC-CCceee---------eeeec-cCCCceEEEEeCCCC---EEEEEECCCCEEEEEECCCCcEEEE-EEcCCC
Confidence 2333333 232210 01122 133467899999 56 6777777788999999987543222 222223
Q ss_pred CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688 228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260 (349)
Q Consensus 228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~ 260 (349)
.....++|+| ++++|+.+......|..++...
T Consensus 270 ~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CcceeEEEcC-CCCEEEEEECCCCEEEEEeCCc
Confidence 4578899999 8886666654443699988763
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.29 E-value=0.0021 Score=58.16 Aligned_cols=223 Identities=9% Similarity=-0.007 Sum_probs=134.6
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV 172 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 172 (349)
++.+....|+..+++..... ..+... . ......++|++.++.++.+-..++.|..+++......
T Consensus 9 Ll~s~~~~I~~i~l~~~~~~--~~~~~~---~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~---------- 72 (628)
T 4a0p_A 9 LLFSRRADIRRISLETNNNN--VAIPLT---G-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE---------- 72 (628)
T ss_dssp EEEEETTEEEEEESSCTTCE--EECCCC---S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------
T ss_pred EEEEeCCcEEEEECCCCCcc--eEEEcC---C-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----------
Confidence 44444458999999865321 111110 0 1356789999855555566666788998888754332
Q ss_pred eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--CC
Q psy17688 173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM--NA 250 (349)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~ 250 (349)
..+.........+++.+.+. +++++-...+.|.+.++......... . ..-.....++++| ....|+.... .+
T Consensus 73 -~v~~~g~~~P~GlAvD~~~~--~LY~tD~~~~~I~v~~~dG~~~~~l~-~-~~l~~P~~iavdp-~~G~lY~tD~g~~~ 146 (628)
T 4a0p_A 73 -HVVEFGLDYPEGMAVDWLGK--NLYWADTGTNRIEVSKLDGQHRQVLV-W-KDLDSPRALALDP-AEGFMYWTEWGGKP 146 (628)
T ss_dssp -EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSTTCEEEE-C-SSCCCEEEEEEET-TTTEEEEEECSSSC
T ss_pred -EEEeCCCCCcceEEEEeCCC--EEEEEECCCCEEEEEecCCCcEEEEE-e-CCCCCcccEEEcc-CCCeEEEeCCCCCC
Confidence 12222224577889987652 66677777889999999765433222 1 2335678999999 5455555542 34
Q ss_pred cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA 330 (349)
Q Consensus 251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 330 (349)
.|...++.. .....+...-.....|++++++..+..+=...+.|...|+..... ..+........++++..
T Consensus 147 -~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 147 -KIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------EVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp -EEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEEECCSCEEEEEEET
T ss_pred -EEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------EEeeccCCCceEEEEEC
Confidence 477777763 333333334457789999998877455656678899998866322 12222233456777765
Q ss_pred CCCceEEEEc-CCeEEEee
Q psy17688 331 TQPDWIAICY-NKYLEVLR 348 (349)
Q Consensus 331 ~~~~l~~~~~-d~~v~vw~ 348 (349)
+ .++.+.. .+.|...+
T Consensus 218 -~-~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 218 -D-YIYWTDWSRRSIERAN 234 (628)
T ss_dssp -T-EEEEEETTTTEEEEEE
T ss_pred -C-EEEEecCCCCEEEEEE
Confidence 2 4555554 46665543
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.26 E-value=0.00068 Score=60.84 Aligned_cols=193 Identities=11% Similarity=0.026 Sum_probs=103.4
Q ss_pred EEecCCCCCeEEEEEcC----------------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCC
Q psy17688 132 FDWNEVDPNLLGTSSID----------------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGG 194 (349)
Q Consensus 132 ~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~ 194 (349)
+++.+ ...+++.+..+ +.|..+|.++++....++...... ..+.....++. +... .++..
T Consensus 246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~-wd~d~~~~p~l-~d~~~~~G~~ 322 (599)
T 1w6s_A 246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE-WDYAGVNVMML-SEQKDKDGKA 322 (599)
T ss_dssp CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS-SCCCCCCCCEE-EEEECTTSCE
T ss_pred eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc-ccccCCCccEE-EeccccCCcE
Confidence 34444 55667766654 379999999999885432110000 00001111221 2221 23311
Q ss_pred ccEEEEEcCCCcEEEEECCCCCceeeeeeCC-----------CCCc--------------------------eeEEEEeC
Q psy17688 195 RDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-----------QHTP--------------------------LLRLAWNK 237 (349)
Q Consensus 195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----------~~~~--------------------------v~~~~~~~ 237 (349)
...++.++.+|.+.++|.++++......... ...+ -..++++|
T Consensus 323 ~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 402 (599)
T 1w6s_A 323 RKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP 402 (599)
T ss_dssp EEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred EEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC
Confidence 1367778999999999999987654332211 0011 13467777
Q ss_pred CCCCeEEEEe---------------------------------------eCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688 238 QDPNYLAMVA---------------------------------------MNACEVIILDVRVPCTPVARLNNHRACVNGI 278 (349)
Q Consensus 238 ~~~~~l~~~~---------------------------------------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~ 278 (349)
+..++++.. ..+ .+..||+.+ ++.+.+... ..+...-
T Consensus 403 -~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G-~l~A~D~~t-G~~~W~~~~-~~~~~~g 478 (599)
T 1w6s_A 403 -KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG-QIKAYNAIT-GDYKWEKME-RFAVWGG 478 (599)
T ss_dssp -TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE-EEEEECTTT-CCEEEEEEE-SSCCCSB
T ss_pred -CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC-eEEEEECCC-CCEEeEecC-CCCccCc
Confidence 555554432 234 588888876 666655532 1122211
Q ss_pred EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC-ceEEEEEcCCCCceEE
Q psy17688 279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG-EINQIQWGATQPDWIA 337 (349)
Q Consensus 279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~ 337 (349)
.....+.. ++.++.|+.++.||.+++ +.+-.++.... ...-+.|..+|+.+++
T Consensus 479 ~~~tagg~-vf~gt~dg~l~A~D~~tG-----~~lW~~~l~~g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 479 TMATAGDL-VFYGTLDGYLKARDSDTG-----DLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp CEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ceEecCCE-EEEECCCCeEEEEECCCC-----CEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence 22334555 777899999999999984 34555554222 1122455567764443
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.24 E-value=0.00093 Score=54.89 Aligned_cols=193 Identities=9% Similarity=0.118 Sum_probs=113.8
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC----CCCccEEEE-EcC--CCcEEEE
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA----GGGRDMFAS-VGA--EGSVRMF 210 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~l~~-~~~--d~~v~iw 210 (349)
...+++.....+-+.+||+ +++.++ .+.. +.++.+..-|. +....++++ .-. +++|.+|
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~-----------~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf 104 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLH-----------SYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY 104 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEE-----------EECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEE-----------EccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence 3456776777889999999 777763 3322 45666666552 100002233 334 5789999
Q ss_pred ECC--CCCceeeeeeC-----CCCCceeEEEE--eCCCCC-eEEEEeeCCcEEEEEeccCC------CcceeEeecCCcc
Q psy17688 211 DLR--HLEHSTIIYED-----PQHTPLLRLAW--NKQDPN-YLAMVAMNACEVIILDVRVP------CTPVARLNNHRAC 274 (349)
Q Consensus 211 d~~--~~~~~~~~~~~-----~~~~~v~~~~~--~~~~~~-~l~~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~~ 274 (349)
++. +.. ...+... .....+..+++ +|..+. ++++...++ .+..|++... .+.++++.. .+.
T Consensus 105 ~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G-~~~q~~l~~~~~g~~~~~lVR~f~l-gsq 181 (355)
T 3amr_A 105 AIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG-EFEQYELKADKNGYISGKKVRAFKM-NSQ 181 (355)
T ss_dssp EECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS-EEEEEEEEECTTSCEEEEEEEEEEC-SSC
T ss_pred EECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC-eEEEEEEEeCCCCcccceEEEEecC-CCC
Confidence 773 322 2222111 11156677777 774454 677888888 6999988431 245666654 357
Q ss_pred eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-cc-CCceEEEEE--cCCCC-ceEEEEc-CCeEEEee
Q psy17688 275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-AA-GGEINQIQW--GATQP-DWIAICY-NKYLEVLR 348 (349)
Q Consensus 275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~~~~-d~~v~vw~ 348 (349)
+-.+...+.... |+.+-++.-|..+|.+.........+..+. ++ ...+-.++. .+++. +|++++- ++++.||+
T Consensus 182 ~EgcvvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 182 TEGMAADDEYGR-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEEEETTTTE-EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred cceEEEcCCCCe-EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 888888888787 888888855444443332211111222221 11 236778877 45555 6777774 67888886
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.23 E-value=0.00052 Score=61.44 Aligned_cols=164 Identities=11% Similarity=0.025 Sum_probs=88.2
Q ss_pred EEEEeCC-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceee
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVG 163 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~ 163 (349)
+++...+ .+..+|..+++.........+.. .....++ + .+..+++++. ++.|..+|..+++.+.
T Consensus 118 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~--v-----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 118 IVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPF--V-----AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCE--E-----ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCE--E-----ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 4444445 89999998886544332222110 1111222 1 2345566654 7999999999999887
Q ss_pred eecccCCcee---------------------eee------eccCCceeeEEEecCCCCccEEEEEcCC------------
Q psy17688 164 RVNSVSGHVK---------------------TQL------IAHDKEVYDIAFSRAGGGRDMFASVGAE------------ 204 (349)
Q Consensus 164 ~~~~~~~~~~---------------------~~~------~~~~~~v~~~~~~~~~~~~~~l~~~~~d------------ 204 (349)
+......... ... .+.......+++.+.. ..++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~---g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL---NLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT---TEEEEECCCCSCSCGGGSCSC
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC---CeEEEECCCCccccCCccCCC
Confidence 6533211000 000 0000001235666665 455555432
Q ss_pred ----CcEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688 205 ----GSVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARLN 269 (349)
Q Consensus 205 ----~~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~ 269 (349)
+.|..+|.++++..-......+. ....-+...+ ++ ..++.++.+| .+.++|..+ ++.+....
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~~w~~~ 343 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPV-NGKMTPLLSHIDRNG-ILYTLNREN-GNLIVAEK 343 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEE-TTEEEEEEEEECTTS-EEEEEETTT-CCEEEEEE
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEeccc-CCcEEEEEEEeCCCc-EEEEEECCC-CCEEeeec
Confidence 35999999998866554433221 1111122223 45 3677888888 699999987 66665543
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=0.0024 Score=55.42 Aligned_cols=246 Identities=8% Similarity=0.019 Sum_probs=134.5
Q ss_pred CeeEEEEecC-CCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe-------cCCCCCeEEEE
Q psy17688 76 PTTKIMWIPD-RKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW-------NEVDPNLLGTS 145 (349)
Q Consensus 76 ~v~~~~~~~~-~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~l~~~ 145 (349)
....|+|.|. ... ++++..+ .|++.|++++.. ..+..... ........++| ++ +++.|+++
T Consensus 140 ~p~~la~dp~~~~~----Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~--~~~~~p~~ia~~~~~~~~d~-~G~~lyva 210 (496)
T 3kya_A 140 DNGRLAFDPLNKDH----LYICYDGHKAIQLIDLKNRML--SSPLNINT--IPTNRIRSIAFNKKIEGYAD-EAEYMIVA 210 (496)
T ss_dssp SEEEEEEETTEEEE----EEEEEETEEEEEEEETTTTEE--EEEECCTT--SSCSBEEEEEECCCBTTTBC-TTCEEEEE
T ss_pred CCCEEEEccCCCCE----EEEEECCCCeEEEEECCCCEE--EEEEccCc--cccCCCcEEEEeecccccCC-CCCEEEEE
Confidence 3568899984 331 5555553 888888877542 22222211 11235778999 87 77756665
Q ss_pred EcCC-------eEEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC----
Q psy17688 146 SIDT-------TCTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR---- 213 (349)
Q Consensus 146 ~~dg-------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~---- 213 (349)
...+ .|.+.+... +..... ... ..+.. ......++.+|++. .++++-..++.|..+|+.
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~---~~~---~~v~~-~~~p~giavdp~~g--~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDR---SDI---QLIAA-YKQCNGATIHPING--ELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTT---SCE---EEEEE-ESCCCCEEECTTTC--CEEEEETTTTEEEEECHHHHHH
T ss_pred eCCCCCcccCceEEEEecCCCCceeec---ccc---eeecc-CCCceEEEEcCCCC--eEEEEECCCCEEEEEecccccc
Confidence 5543 255555333 121100 000 11111 12456889999542 677777788899999997
Q ss_pred ---CCCc-----------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce---eEeecC---C-
Q psy17688 214 ---HLEH-----------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV---ARLNNH---R- 272 (349)
Q Consensus 214 ---~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~---~~~~~~---~- 272 (349)
++.. ...+...........++|+| ++.+|+.+......|+.++.......+ ..+.+. .
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G 360 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSG 360 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCC
T ss_pred cccCceeecccccccccccceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCc
Confidence 4432 11222223334568999999 888766666544468887764311111 222221 0
Q ss_pred -----------cceE-EEEEe-------eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--------------
Q psy17688 273 -----------ACVN-GIAWA-------PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-------------- 319 (349)
Q Consensus 273 -----------~~v~-~~~~~-------p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-------------- 319 (349)
.... .+... +++.. +++=....+|+.++... .+..+-+.
T Consensus 361 ~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~l-yVaD~~N~rIr~i~~~G-------~v~TiaG~g~~~~~~~~~~~G~ 432 (496)
T 3kya_A 361 YRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDF-YFVDRLNFCVRKVTPEG-------IVSTYAGRGASTSLADGNQWGT 432 (496)
T ss_dssp CBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEE-EEEEGGGTEEEEECTTC-------BEEEEEESCTTHHHHHSCSCCC
T ss_pred ccCCcccccccCCCeEEEEEccccccccCCCeE-EEEECCCCEEEEEeCCC-------CEEEEecccccccccCcccccc
Confidence 1233 34444 34443 55556677888887322 12333221
Q ss_pred ----------CCceEEEEEcCC-CCceEEEEcCCeEEEee
Q psy17688 320 ----------GGEINQIQWGAT-QPDWIAICYNKYLEVLR 348 (349)
Q Consensus 320 ----------~~~v~~~~~~~~-~~~l~~~~~d~~v~vw~ 348 (349)
-.....|+++++ +..+++=..+.+|+.+.
T Consensus 433 ~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 433 DDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp CCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 123578999996 65444444468888775
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.16 E-value=0.00027 Score=57.56 Aligned_cols=156 Identities=13% Similarity=0.223 Sum_probs=101.3
Q ss_pred eEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeec----c--CCceeeEEE---ecCCCCccEEE
Q psy17688 130 TSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA----H--DKEVYDIAF---SRAGGGRDMFA 199 (349)
Q Consensus 130 ~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~~~l~ 199 (349)
-+..|.+ ....|..++ ..+.|..||...+.... ..+.. . ...+..+.| .|++ .+++
T Consensus 16 E~~~wd~-~~g~~~vs~l~~g~V~~~~~~~~~~~~----------~~~~~~s~~g~~~~~~sGl~~~~~D~~g---rL~v 81 (334)
T 2p9w_A 16 EDTIYDR-TRQVFYQSNLYKGRIEVYNPKTQSHFN----------VVIDGASSNGDGEQQMSGLSLLTHDNSK---RLFA 81 (334)
T ss_dssp SCEEEET-TTTEEEEEETTTTEEEEECTTTCCEEE----------ECCTTTCCSSCCSEEEEEEEESSSSSCC---EEEE
T ss_pred cCccCcC-CCCEEEEEeccCCEEEEEcCCCCeEEE----------EecCCccccCCCcceeeEEEEeccCCCC---cEEE
Confidence 3578987 445555555 78999999997554431 11111 0 113578999 5777 6777
Q ss_pred EEc-------------CCCcEEEEECC---CCCceeeeeeCC-----------CCCceeEEEEeCCCCCeEEEEeeC-Cc
Q psy17688 200 SVG-------------AEGSVRMFDLR---HLEHSTIIYEDP-----------QHTPLLRLAWNKQDPNYLAMVAMN-AC 251 (349)
Q Consensus 200 ~~~-------------~d~~v~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~~~~d-~~ 251 (349)
+.. .+..|..||+. +++......... .......++..+ +|+..++++.. +
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~- 159 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMP- 159 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSC-
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCC-
Confidence 543 26789999999 665443332110 113478999999 89999999888 7
Q ss_pred EEEEEeccCCCcceeEee------cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 252 EVIILDVRVPCTPVARLN------NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 252 ~i~v~d~~~~~~~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.|..++... +.+..+. ......+.|+++|+|.. |++....|.+..+|+..
T Consensus 160 ~I~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 160 AIARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNK-LIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTE-EEEESSSSSEEEEECSS
T ss_pred eEEEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCE-EEEEcCCCeEEEEcCCC
Confidence 577777653 3333221 11223679999999998 55554499999999884
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.14 E-value=0.0028 Score=54.00 Aligned_cols=223 Identities=9% Similarity=0.013 Sum_probs=129.8
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC--chhheeccCCCCCCC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE--TRLECILNNNKNSDF 125 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~--~~~~~~~~~~~~~~~ 125 (349)
...|+..+++.. ... ........+..++|.+.... ++.+-. . .|+.++++... ..........
T Consensus 91 ~~~I~~i~l~~~--~~~--~~~~~~~~~~~l~~d~~~~~----lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~----- 157 (400)
T 3p5b_L 91 RHEVRKMTLDRS--EYT--SLIPNLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----- 157 (400)
T ss_dssp TTEEEEECTTSC--SCE--EEECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEEC------CCCEEEECSS-----
T ss_pred cceeEEEccCCc--cee--EeccccCcceEEeeeeccCc----eEEEecCCCeEEEEEcccCCCCCcceEEEeCC-----
Confidence 567887777533 222 12344567899999986653 444433 3 88888886521 0111121111
Q ss_pred cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C
Q psy17688 126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E 204 (349)
Q Consensus 126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d 204 (349)
......+++.+..++++++-...+.|.+.++...... ..+.........+++.|.+. .++.+-.. .
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~-----------~l~~~~~~~P~~iavdp~~g--~ly~td~~~~ 224 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------TLFRENGSKPRAIVVDPVHG--FMYWTDWGTP 224 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE-----------EEEECSSCCEEEEEEETTTT--EEEEEECSSS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE-----------EEEeCCCCCcceEEEecccC--eEEEEeCCCC
Confidence 1345567776545666666666788999988755433 22233344578999999652 44444322 4
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ec--CCcceEEEEEe
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NN--HRACVNGIAWA 281 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~--~~~~v~~~~~~ 281 (349)
+.|...++.......... ..-.....|+++| .+..|+.+......|..+|+.. .....+ .. .-.....+++
T Consensus 225 ~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~-~~~~lY~aD~~~~~I~~~d~dG--~~~~~~~~~~~~l~~P~gl~v- 298 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVT--ENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV- 298 (400)
T ss_dssp CCEEEEETTSCSCEEEEC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CCCEEEEECSSTTSSEEEEEE-
T ss_pred CEEEEEeCCCCccEEEEE--CCCCceEEEEEEe-CCCEEEEEECCCCEEEEEeCCC--CccEEEEeCCCCCCCCEEEEE-
Confidence 789999987654333322 2235678999999 6666666654433699999864 323332 21 1234456666
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
++..++.+-...+.|..+|..++
T Consensus 299 -~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 299 -FEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp -ETTEEEEEESSSCSEEEEESSSC
T ss_pred -eCCEEEEecCCCCeEEEEEcCCC
Confidence 34454667777788888886553
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.14 E-value=0.001 Score=57.27 Aligned_cols=156 Identities=10% Similarity=0.033 Sum_probs=94.6
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc-EEEEEcCCC-
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD-MFASVGAEG- 205 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~d~- 205 (349)
....++++|.+...|.++...+.|+.+|+..+... .+.........+++++++ + ++++...++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~------------~~~~~~~~P~~ia~d~~G---~~lyvad~~~~~ 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS------------TVYSGLSKVRTICWTHEA---DSMIITNDQNNN 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE------------EEECCCSCEEEEEECTTS---SEEEEEECCSCT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE------------EEecCCCCcceEEEeCCC---CEEEEEeCCCCc
Confidence 34578887622344555555578888888776543 223344568899999998 6 444444322
Q ss_pred ---cEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEE
Q psy17688 206 ---SVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIA 279 (349)
Q Consensus 206 ---~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~ 279 (349)
.+..++... ... ..+. .......++++|.++.++++-..++ .|..++... ......... .......++
T Consensus 203 ~~~~v~~~~~~g-~~~~~~~l~---~~~~p~giavdp~~g~lyv~d~~~~-~V~~~~~~~-~~~~~~~~~~~~~~P~gia 276 (430)
T 3tc9_A 203 DRPNNYILTRES-GFKVITELT---KGQNCNGAETHPINGELYFNSWNAG-QVFRYDFTT-QETTPLFTIQDSGWEFHIQ 276 (430)
T ss_dssp TSEEEEEEEGGG-TSCSEEEEE---ECSSCCCEEECTTTCCEEEEETTTT-EEEEEETTT-TEEEEEEECSSSSCCEEEE
T ss_pred ccceEEEEeCCC-ceeeeeeec---cCCCceEEEEeCCCCEEEEEECCCC-EEEEEECCC-CcEEEEEEcCCCCcceeEE
Confidence 234444332 221 1221 1244678889995555555555566 699999875 332121211 224578899
Q ss_pred EeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 280 WAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 280 ~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
|+|++++++++-...+.|..++...
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EcCCCCEEEEEECCCCEEEEEeCCc
Confidence 9999997466666788999988774
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.13 E-value=0.0012 Score=56.97 Aligned_cols=200 Identities=12% Similarity=-0.005 Sum_probs=112.3
Q ss_pred ceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--
Q psy17688 128 PLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-- 204 (349)
Q Consensus 128 ~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-- 204 (349)
....++|+|. +...|..+...+.|+.+|+.+++.. .+.........+++++++ +++++....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~------------~~~~~~~~P~giavd~dG---~lyVad~~~~~ 204 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD------------IKTTNIGQCADVNFTLNG---DMVVVDDQSSD 204 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE------------EECCCCSCEEEEEECTTC---CEEEEECCSCT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE------------EeecCCCCccEEEECCCC---CEEEEcCCCCc
Confidence 3457889873 2445555554488999998776654 233344568899999999 755554321
Q ss_pred -C-cEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ec-CCcceEEEE
Q psy17688 205 -G-SVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NN-HRACVNGIA 279 (349)
Q Consensus 205 -~-~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~-~~~~v~~~~ 279 (349)
. .+...+....... .... .......++++|.++.++++-..++ .|+.+|... +.....+ .. ....-..++
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~-~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia 279 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHA-MISSYDPAT-GTLTEEEVMMDTKGSNFHIV 279 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCS-EEEEECTTT-CCEEEEEEECSCCSSCEEEE
T ss_pred ccceEEEEECCCCeecccccc---ccCCCCEEEEeCCCCeEEEEECCCC-EEEEEECCC-CeEEEEEeccCCCCCcccEE
Confidence 1 2333333221110 1111 2244577889984455444444556 699999874 3331222 11 122335799
Q ss_pred EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc---------------CCceEEEEE---------cCCCCce
Q psy17688 280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA---------------GGEINQIQW---------GATQPDW 335 (349)
Q Consensus 280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~---------~~~~~~l 335 (349)
|+|++..++++-...+.|+.++..........+ ..+.+. -.....+++ .+++..+
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~-~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ly 358 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP-YIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFY 358 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC-EEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE-EEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEE
Confidence 999999646666677889998876421111111 112111 123567888 6777644
Q ss_pred EEEEcCCeEEEee
Q psy17688 336 IAICYNKYLEVLR 348 (349)
Q Consensus 336 ~~~~~d~~v~vw~ 348 (349)
++-..+++|+.++
T Consensus 359 vaD~~n~~I~~~~ 371 (433)
T 4hw6_A 359 FCDRDSHTVRVLT 371 (433)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEECCCCEEEEEC
Confidence 4444467787764
No 286
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.13 E-value=0.0017 Score=54.03 Aligned_cols=209 Identities=13% Similarity=0.061 Sum_probs=110.4
Q ss_pred ceeeEEEeecCCCceEEEEEee---------ecccCCeEEEEeccccccccccceEec-----CCCCeeEEEEecC--CC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSY---------VEEYNNKVQIVALNEDISEFGPKSTID-----HPYPTTKIMWIPD--RK 87 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~---------~~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~--~~ 87 (349)
..-.+...| +|. +.+++. ..+.+|.|.+++.+....+.......+ .......+.+.++ +.
T Consensus 51 G~EDi~~~~--~G~--~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 51 GSEDLEILP--NGL--AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp CCCEEEECT--TSE--EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred CcceeEEcC--CCe--EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence 455667666 785 444430 002389999998875444433332222 2246788888774 32
Q ss_pred CCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----------------
Q psy17688 88 GVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---------------- 147 (349)
Q Consensus 88 ~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---------------- 147 (349)
. .++++-. + .|.+|+++......... ....... -...+++...+ ++.+.++...
T Consensus 127 ~---~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~~g~~-~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 127 V---YLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTIRHKL-LPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp E---EEEEEECSTTCCEEEEEEEETTTTEEEEE-EEECCTT-CSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred E---EEEEEECCCCCCeEEEEEEECCCCEEEEE-eccccCC-CCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccC
Confidence 1 1444422 3 88888876643222111 1111111 24567788876 7776666431
Q ss_pred -CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688 148 -DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ 226 (349)
Q Consensus 148 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 226 (349)
.|.|.-+|. ++. ..+...-...+.++|+|+++ .++++-+..+.|..||+..............
T Consensus 201 ~~g~vyr~d~--~~~------------~~~~~~l~~pNGia~spDg~--~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~ 264 (355)
T 3sre_A 201 AWSFVTYYSP--NDV------------RVVAEGFDFANGINISPDGK--YVYIAELLAHKIHVYEKHANWTLTPLRVLSF 264 (355)
T ss_dssp CCEEEEEECT--TCC------------EEEEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEEEEC
T ss_pred CccEEEEEEC--CeE------------EEeecCCcccCcceECCCCC--EEEEEeCCCCeEEEEEECCCCcEecCEEEeC
Confidence 234444443 221 12222334578999999983 4555556788999999874321111100122
Q ss_pred CCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
....-.++.++.+|++.+++..++..|..||.
T Consensus 265 ~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 265 DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp SSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 45667888887227766656545422444443
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.10 E-value=0.0064 Score=56.40 Aligned_cols=223 Identities=9% Similarity=0.006 Sum_probs=125.2
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc--hhheeccCCCCCCC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET--RLECILNNNKNSDF 125 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~--~~~~~~~~~~~~~~ 125 (349)
...|+..+++.. .... .......+..|+|.+.... ++.+-. . .|+.+++..... ....++....
T Consensus 403 ~~~Ir~i~l~~~--~~~~--l~~~~~~~~gl~~d~~~~~----lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l---- 470 (791)
T 3m0c_C 403 RHEVRKMTLDRS--EYTS--LIPNLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---- 470 (791)
T ss_dssp BSSEEEECTTSC--CCEE--EECSCSSEEEEEEETTTTE----EEEEETTTTEEEEEEC--------CEEEECSSC----
T ss_pred ccceeEeeccCC--ccee--eecCCCceEEEeecccCCe----eEEeeccceeEEEEeccCCCCCcceeEEEecCC----
Confidence 345666666432 2221 2234557889999986552 444444 3 888888865311 1112222111
Q ss_pred cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-
Q psy17688 126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE- 204 (349)
Q Consensus 126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d- 204 (349)
.....|++.+..++++++-...+.|.+.++...... ..+.........|++.|... .++++-...
T Consensus 471 -~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-----------~l~~~~l~~P~gIaVDp~~g--~LYwtD~g~~ 536 (791)
T 3m0c_C 471 -QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------TLFRENGSKPRAIVVDPVHG--FMYWTDWGTP 536 (791)
T ss_dssp -SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-----------EEEECTTCCEEEEEEETTTT--EEEEEECSSS
T ss_pred -CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-----------EEEeCCCCCcceEEEecCCC--CEEEecCCCC
Confidence 234467776545566666667789999998754432 22223344588999999752 444443333
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecC--CcceEEEEEe
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNH--RACVNGIAWA 281 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~--~~~v~~~~~~ 281 (349)
+.|...++........+. ..-.....|++++ ....|+.+......|..+++.. .....+ ... -.....|++
T Consensus 537 ~~I~~~~~dG~~~~~lv~--~~l~~P~GLavD~-~~~~LYwaD~~~~~I~~~d~dG--~~~~~v~~~~~~l~~P~glav- 610 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVT--ENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV- 610 (791)
T ss_dssp CEEEEEETTSCCEEEEEC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CSCEEEEECTTTTSSEEEEEE-
T ss_pred CeEEEEecCCCceEEEEe--CCCCCceEEEEec-CCCeEEEEeCCCCcEEEEecCC--CceEEEecCCCccCCCCEEEE-
Confidence 789999987654333332 2335688999998 5566666554433699999864 333333 221 123345555
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecC
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~ 305 (349)
.+..++++-...+.|...|..++
T Consensus 611 -~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 611 -FEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTC
T ss_pred -eCCEEEEEECCCCEEEEEeCCCC
Confidence 44554666666777877775543
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.09 E-value=0.0029 Score=57.18 Aligned_cols=190 Identities=7% Similarity=0.011 Sum_probs=111.2
Q ss_pred CcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688 91 PDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG 170 (349)
Q Consensus 91 ~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (349)
|.+|-+-...|+..+++............. .....++|++.++.++.+=...+.|..+++.......
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~------~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~------- 76 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVGGL------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ------- 76 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CBCC------SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CE-------
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEcCC------CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceE-------
Confidence 335555555899988876421111121111 3466899987444444454456788888886543210
Q ss_pred ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--
Q psy17688 171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-- 248 (349)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-- 248 (349)
..+.........+++.+.+. +++++-...+.|.+.++......... . ..-.....|+++| ....|+....
T Consensus 77 ---~v~~~~~~~P~GlAvD~~~~--~ly~~d~~~~~I~v~~~dG~~~~~l~-~-~~l~~P~~Iavdp-~~g~ly~tD~g~ 148 (619)
T 3s94_A 77 ---NVVVSGLLSPDGLACDWLGE--KLYWTDSETNRIEVSNLDGSLRKVLF-W-QELDQPRAIALDP-SSGFMYWTDWGE 148 (619)
T ss_dssp ---EEECSSCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE-C-SSCSCCCCEEEET-TTTEEEEEECSS
T ss_pred ---EEEeCCCCCcCeEEEEecCC--EEEEEeCCCCEEEEEECCCCCEEEEE-e-CCCCCCceEEEec-CCCeEEEeccCC
Confidence 12222224688999998652 67777778899999999875433332 1 2335678999999 5444544443
Q ss_pred CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 249 NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 249 d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.+ .|...++. +.....+. ..-.....|++++++..+..+=...+.|...|+..
T Consensus 149 ~~-~I~r~~~d--G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 149 VP-KIERAGMD--GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp SC-EEEEEETT--SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CC-EEEEEECC--CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 34 47666665 33333332 23456789999998777455656677888888865
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.09 E-value=0.0029 Score=52.03 Aligned_cols=224 Identities=8% Similarity=-0.023 Sum_probs=129.1
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA 127 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 127 (349)
...|+.++++....+.. ........+..++|.+.... ++.+-. . .|..++++..... ........ .
T Consensus 12 ~~~I~~i~l~~~~~~~~--~~~~~~~~~~~ld~d~~~~~----lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l-----~ 79 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT--IVVGGLEDAAAVDFVFSHGL----IYWSDVSEEAIKRTEFNKTESV-QNVVVSGL-----L 79 (318)
T ss_dssp EEEEEEEETTCTTSCCE--EEEEEEEEEEEEEEEGGGTE----EEEEETTTTEEEEEETTSSSCC-CEEEEECC-----S
T ss_pred cCeEEEEECCCCceEEE--EEecCCCccEEEEEEeCCCE----EEEEECCCCcEEEEEccCCCce-EEEEcCCC-----C
Confidence 45688887764421211 12222235779999986552 444443 3 8888888765311 11111110 2
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCc
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGS 206 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~ 206 (349)
....+++.+..+.++++-...+.|.++++...... ............+++.|.+. .++.+-. ..+.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-----------~l~~~~~~~P~giavdp~~g--~ly~td~~~~~~ 146 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-----------VLFWQELDQPRAIALDPSSG--FMYWTDWGEVPK 146 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSSEEEEEEEGGGT--EEEEEECSSSCE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-----------EEEeCCCCCccEEEEeCCCC--EEEEEecCCCCE
Confidence 34467776545666666666788999998754332 11223345678999998752 4444432 3578
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSS 285 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~ 285 (349)
|...++......... . ..-.....++++| ++..|+.+......|..+|+.. .....+ .........+++. +.
T Consensus 147 I~r~~~dG~~~~~~~-~-~~l~~Pnglavd~-~~~~lY~aD~~~~~I~~~d~dG--~~~~~~~~~~~~~P~glav~--~~ 219 (318)
T 3sov_A 147 IERAGMDGSSRFIII-N-SEIYWPNGLTLDY-EEQKLYWADAKLNFIHKSNLDG--TNRQAVVKGSLPHPFALTLF--ED 219 (318)
T ss_dssp EEEEETTSCSCEEEE-C-SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CSCEEEECSCCSCEEEEEEE--TT
T ss_pred EEEEEcCCCCeEEEE-E-CCCCCccEEEEec-cCCEEEEEECCCCEEEEEcCCC--CceEEEecCCCCCceEEEEe--CC
Confidence 888888754332222 1 2234568999999 6666666654433699999863 222222 2233455677774 33
Q ss_pred CEEEEEcCCCcEEEEEeecC
Q psy17688 286 CHICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 286 ~~l~~~~~d~~v~iwd~~~~ 305 (349)
.++.+-...+.|..+|..++
T Consensus 220 ~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 220 ILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEEEETTTTEEEEEETTTC
T ss_pred EEEEEecCCCeEEEEECCCC
Confidence 44666666788888887553
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.08 E-value=0.0029 Score=56.77 Aligned_cols=163 Identities=15% Similarity=0.010 Sum_probs=89.7
Q ss_pred EEEeC-C-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEE------cCCeEEEEeccCcceee
Q psy17688 94 LATSG-D-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSS------IDTTCTIWCLETNQVVG 163 (349)
Q Consensus 94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~ 163 (349)
+..++ + .+.-+|..+++............ .....++ + .+..+++++ .+|.|+.+|..+++.+.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~--v-----~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPY--V-----VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCE--E-----ETTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCE--E-----ECCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 55554 5 88889998886543332221110 1111222 1 123555555 37999999999999987
Q ss_pred eecccCCceee--------------------------eeeccCCce-eeEEEecCCCCccEEEEEcCC------------
Q psy17688 164 RVNSVSGHVKT--------------------------QLIAHDKEV-YDIAFSRAGGGRDMFASVGAE------------ 204 (349)
Q Consensus 164 ~~~~~~~~~~~--------------------------~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~d------------ 204 (349)
+.......... .+..-...+ ..+++.+.. .+++.+..+
T Consensus 197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~---g~vy~g~g~~~p~~~~~r~gd 273 (599)
T 1w6s_A 197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT---NLIYFGTGNPAPWNETMRPGD 273 (599)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT---TEEEEECCCCSCSCGGGSCSC
T ss_pred EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC---CEEEEeCCCCccccCcccCCC
Confidence 65332111000 000000011 134566666 567766654
Q ss_pred ----CcEEEEECCCCCceeeeeeCCCCC-------ceeEEEEe-CCCC---CeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688 205 ----GSVRMFDLRHLEHSTIIYEDPQHT-------PLLRLAWN-KQDP---NYLAMVAMNACEVIILDVRVPCTPVARLN 269 (349)
Q Consensus 205 ----~~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~-~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~ 269 (349)
+.|..+|.++++..-......+.. ...-+... . ++ ..++.++.+| .+.++|.++ ++++....
T Consensus 274 ~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~lw~~~ 350 (599)
T 1w6s_A 274 NKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDK-DGKARKLLTHPDRNG-IVYTLDRTD-GALVSANK 350 (599)
T ss_dssp CTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECT-TSCEEEEEEEECTTS-EEEEEETTT-CCEEEEEE
T ss_pred ccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEecccc-CCcEEEEEEEECCCc-EEEEEECCC-CCEeeccc
Confidence 379999999988665554433321 11112222 3 55 4677788899 699999987 76665543
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.04 E-value=0.0064 Score=54.53 Aligned_cols=169 Identities=12% Similarity=0.009 Sum_probs=89.7
Q ss_pred EEEEeCC-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCC-eEEEEEc------CCeEEEEeccCccee
Q psy17688 93 LLATSGD-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPN-LLGTSSI------DTTCTIWCLETNQVV 162 (349)
Q Consensus 93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~-~l~~~~~------dg~i~iwd~~~~~~~ 162 (349)
+++...+ .+.-+|..+++.........+.. .....++ +.=...+++ .+++++. +|.|..+|..+++.+
T Consensus 120 v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 120 VFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp EEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred EEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 4444445 89999998886544332221110 1111222 110111222 5666553 789999999999988
Q ss_pred eeecccCCcee----eee-----------e---------------ccCCceeeEEEecCCCCccEEEEEcC---------
Q psy17688 163 GRVNSVSGHVK----TQL-----------I---------------AHDKEVYDIAFSRAGGGRDMFASVGA--------- 203 (349)
Q Consensus 163 ~~~~~~~~~~~----~~~-----------~---------------~~~~~v~~~~~~~~~~~~~~l~~~~~--------- 203 (349)
.+......... ..+ . +....-..+++.|.. .+++.+..
T Consensus 198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~---g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAET---NTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTT---TEEEEEECCBSSSCGGG
T ss_pred eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCC---CEEEEeCCCCCcccCcc
Confidence 75432110000 000 0 000011245667765 45655542
Q ss_pred -----------C----CcEEEEECCCCCceeeeeeCCCCC-------ceeEEEEe-CCCC---CeEEEEeeCCcEEEEEe
Q psy17688 204 -----------E----GSVRMFDLRHLEHSTIIYEDPQHT-------PLLRLAWN-KQDP---NYLAMVAMNACEVIILD 257 (349)
Q Consensus 204 -----------d----~~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~-~~~~---~~l~~~~~d~~~i~v~d 257 (349)
| +.|..+|.++++..-......+.. ...-+... . ++ ..++.++.+| .++++|
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~-~G~~~~~v~~~~~~G-~l~~lD 352 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAK-DGKIVKATAHADRNG-FFYVVD 352 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECS-SSCEEEEEEEECTTS-EEEEEE
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecC-CCCEEEEEEEECCCc-eEEEEE
Confidence 2 589999999988765554332221 11112222 3 45 3788889999 699999
Q ss_pred ccCCCcceeEee
Q psy17688 258 VRVPCTPVARLN 269 (349)
Q Consensus 258 ~~~~~~~~~~~~ 269 (349)
.++ ++.+....
T Consensus 353 ~~t-G~~lw~~~ 363 (582)
T 1flg_A 353 RSN-GKLQNAFP 363 (582)
T ss_dssp TTT-CCEEEEEE
T ss_pred CCC-CCEecccc
Confidence 987 66665543
No 292
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.04 E-value=0.00022 Score=65.11 Aligned_cols=232 Identities=8% Similarity=-0.027 Sum_probs=118.8
Q ss_pred EEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--------C
Q psy17688 28 MNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--------D 99 (349)
Q Consensus 28 ~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--------~ 99 (349)
+++.+ +|+. +++|+. + ++.+.+|+... .+............-.++...++++ +++.|+ +
T Consensus 248 ~~~~~--~g~l-yv~GG~--~-~~~v~~yd~~t--~~W~~~~~~~~~R~~~s~~~~~dg~-----iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 248 ISMDG--NGQI-VVTGGN--D-AKKTSLYDSSS--DSWIPGPDMQVARGYQSSATMSDGR-----VFTIGGSWSGGVFEK 314 (656)
T ss_dssp EEECT--TSCE-EEECSS--S-TTCEEEEEGGG--TEEEECCCCSSCCSSCEEEECTTSC-----EEEECCCCCSSSCCC
T ss_pred ccCCC--CCCE-EEeCCC--C-CCceEEecCcC--CceeECCCCCccccccceEEecCCe-----EEEEeCcccCCcccc
Confidence 45555 8885 777764 1 44788887653 3333222222222234555667887 777776 2
Q ss_pred cEEEEECCCCCchhheec--cCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---------eEEEEeccCcceeeeeccc
Q psy17688 100 YLRVWRAGEPETRLECIL--NNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---------TCTIWCLETNQVVGRVNSV 168 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~ 168 (349)
.+.+||..++........ .......+ .. .+. .++..++.|+.+| .+..||..+.......
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~----~~~-~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~--- 385 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADK-QG----LYR-SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA--- 385 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCT-TG----GGT-TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE---
T ss_pred cceEeCCCCCcceeCCCccccccccccc-cc----eee-cCCceEEEECCCCcEEEecCccceeeeecCCcceeecC---
Confidence 689999987642211000 00000000 00 111 2455556665544 4677887766543110
Q ss_pred CCceeeeeec------cCCceeeEEEec-CCCCccEEEEEcCCC-----------cEEEEECCCCCceeee-eeCCCCCc
Q psy17688 169 SGHVKTQLIA------HDKEVYDIAFSR-AGGGRDMFASVGAEG-----------SVRMFDLRHLEHSTII-YEDPQHTP 229 (349)
Q Consensus 169 ~~~~~~~~~~------~~~~v~~~~~~~-~~~~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~-~~~~~~~~ 229 (349)
..... ....-.++.+.. ++ ++++.|+.++ .+.+||..+....... ........
T Consensus 386 -----~~~~~~~~~~~~~~~~~av~~~~~~~---~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~ 457 (656)
T 1k3i_A 386 -----GKRQSNRGVAPDAMCGNAVMYDAVKG---KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFART 457 (656)
T ss_dssp -----EECEETTEECCCCBTCEEEEEETTTT---EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCB
T ss_pred -----CccccccccCCCCCCCceEeccCCCC---eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcc
Confidence 00000 011123344433 44 7888887532 6788888775533222 01112222
Q ss_pred eeEEEEeCCCCCeEEEEeeC-----------CcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcC
Q psy17688 230 LLRLAWNKQDPNYLAMVAMN-----------ACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGD 293 (349)
Q Consensus 230 v~~~~~~~~~~~~l~~~~~d-----------~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 293 (349)
-.+++..| ++.+++.|+.+ . .+.+||..+ .+ .+..+...+.......+.|+++. ++.|+.
T Consensus 458 ~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~-~v~~ydp~t-~~W~~~~~~~~~R~~hs~a~ll~dg~v-~v~GG~ 530 (656)
T 1k3i_A 458 FHTSVVLP-DGSTFITGGQRRGIPFEDSTPVF-TPEIYVPEQ-DTFYKQNPNSIVRVYHSISLLLPDGRV-FNGGGG 530 (656)
T ss_dssp SCEEEECT-TSCEEEECCBSBCCTTCCCSBCC-CCEEEEGGG-TEEEECCCCSSCCCTTEEEEECTTSCE-EEEECC
T ss_pred cCCeEECC-CCCEEEECCcccCcCcCCCCccc-ceEEEcCCC-CceeecCCCCCccccccHhhcCCCcEE-EecCCC
Confidence 34556667 88999998854 3 589999875 22 11112222223334556789987 888774
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.00 E-value=0.0044 Score=51.18 Aligned_cols=233 Identities=8% Similarity=0.064 Sum_probs=120.0
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-cCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSGD-Y 100 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~ 100 (349)
..++++.|+| +.. +++| . .+.|.. -............. .++..+..+.+.+++. +++.+.+ .
T Consensus 80 ~~~~~i~~~~---~~~-~~~g-~----~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~g~ 143 (327)
T 2xbg_A 80 YRFNSVSFQG---NEG-WIVG-E----PPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-----AEMITNVGA 143 (327)
T ss_dssp CEEEEEEEET---TEE-EEEE-E----TTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-----EEEEETTCC
T ss_pred ccEEEEEecC---CeE-EEEE-C----CCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCC-----EEEEeCCcc
Confidence 4688888874 442 4444 3 554433 22221222221111 2334578888877765 7776654 3
Q ss_pred EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE-EeccCcceeeeecccCCceeeeeecc
Q psy17688 101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI-WCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
| |...+............ ...+..+.+.+ ++.+++.+ .+|.+.. +|- .++... ..-...
T Consensus 144 v--~~S~DgG~tW~~~~~~~-----~~~~~~~~~~~-~~~~~~~g-~~G~~~~S~d~-gG~tW~----------~~~~~~ 203 (327)
T 2xbg_A 144 I--YRTKDSGKNWQALVQEA-----IGVMRNLNRSP-SGEYVAVS-SRGSFYSTWEP-GQTAWE----------PHNRTT 203 (327)
T ss_dssp E--EEESSTTSSEEEEECSC-----CCCEEEEEECT-TSCEEEEE-TTSSEEEEECT-TCSSCE----------EEECCS
T ss_pred E--EEEcCCCCCCEEeecCC-----CcceEEEEEcC-CCcEEEEE-CCCcEEEEeCC-CCCcee----------ECCCCC
Confidence 3 33333222222222221 24678889987 66666555 4454433 332 122221 011233
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD 257 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d 257 (349)
...+..+.+.+++ .++ .++.+|.+++.+...++.-..+... .....+..+.+.+ ++.+++++. ++ .+ ++.
T Consensus 204 ~~~~~~~~~~~~g---~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g-~i-~~S 275 (327)
T 2xbg_A 204 SRRLHNMGFTPDG---RLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AG-AL-LCS 275 (327)
T ss_dssp SSCEEEEEECTTS---CEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TT-CE-EEE
T ss_pred CCccceeEECCCC---CEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CC-eE-EEe
Confidence 4568888888877 444 4556788877643322211111111 1224588899988 677666655 55 25 333
Q ss_pred ccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688 258 VRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 302 (349)
Q Consensus 258 ~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~ 302 (349)
... ++.-..+. .....+..+.|.+++. +++++.+|.|.-++-
T Consensus 276 ~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 276 QDG-GQTWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp SST-TSSCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred CCC-CcccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 332 33333332 1235678898876554 566677897766654
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.98 E-value=7.4e-05 Score=68.55 Aligned_cols=180 Identities=11% Similarity=0.029 Sum_probs=102.6
Q ss_pred CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc----ceeeeecccCCceee
Q psy17688 99 DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN----QVVGRVNSVSGHVKT 174 (349)
Q Consensus 99 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~ 174 (349)
..|+..++...... .+... ...+..++|++..+.++++-...+.|+.+++... ... .
T Consensus 386 ~~I~~id~~~~~~~--~~~~~------~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~-----------~ 446 (699)
T 1n7d_A 386 HEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-----------T 446 (699)
T ss_dssp TC-CEECTTSCCEE--CCSCC------CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC-----------C
T ss_pred cceEEEeCCCCcce--eeecc------CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE-----------E
Confidence 37777777654321 11111 1245578888733444444445678988888751 111 1
Q ss_pred eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-CcEE
Q psy17688 175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-ACEV 253 (349)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~~i 253 (349)
.+.........|++.+.+. +++++-...+.|.++++........+. ........++++|.++.++++-... + .|
T Consensus 447 ~i~~~~~~P~glavD~~~g--~LY~tD~~~~~I~v~d~dg~~~~~l~~--~~~~~P~giavDp~~g~ly~td~~~~~-~I 521 (699)
T 1n7d_A 447 VISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--EQGSKPRAIVVDPVHGFMYWTDWGTPA-KI 521 (699)
T ss_dssp BCCSCC--CCCEECCCSSS--BCEECCTTTSCEEEEBSSSCCEEEECC--CSSCCCCCEECCSSSSCCEECCCSSSC-CE
T ss_pred EEeCCCCCcceEEEEeeCC--cEEEEeccCCeEEEEecCCCceEEEEe--CCCCCcceEEEccCCCcEEEcccCCCC-eE
Confidence 1111223456788876542 566666677899999988654322221 1224567899999444444443333 5 48
Q ss_pred EEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 254 IILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
..+++.. .....+ ...-...+.|+|+|++..|+++-+..+.|..+|+..
T Consensus 522 ~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 522 KKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp EBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 8877753 222222 122345678999998887566666778899999865
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.88 E-value=0.00015 Score=66.52 Aligned_cols=225 Identities=8% Similarity=-0.034 Sum_probs=115.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D- 99 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~- 99 (349)
..+..++|++ .+.. |.++.. ..+.|+.++++... +................|++.+.+.. ++++-. .
T Consensus 406 ~~p~gla~d~--~~~~-Ly~sD~---~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~----LY~tD~~~~ 475 (699)
T 1n7d_A 406 RNVVALDTEV--ASNR-IYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLG 475 (699)
T ss_dssp TTCCCCEEET--TTTE-EEECCT---TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSB----CEECCTTTS
T ss_pred cceEEEcccc--ccCe-EEEEec---CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCc----EEEEeccCC
Confidence 4566788887 5553 555432 25778888775310 01111111111224567788755442 444433 3
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-CeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-TTCTIWCLETNQVVGRVNSVSGHVKTQLIA 178 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.|.+++++.... ..+..... .....++++|..+.++++-... +.|...++...... .....
T Consensus 476 ~I~v~d~dg~~~--~~l~~~~~-----~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-----------~l~~~ 537 (699)
T 1n7d_A 476 TVSVADTKGVKR--KTLFREQG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTE 537 (699)
T ss_dssp CEEEEBSSSCCE--EEECCCSS-----CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------EESCS
T ss_pred eEEEEecCCCce--EEEEeCCC-----CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------EEEeC
Confidence 899998875431 11211111 2345677877444444443332 67777776533221 11112
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV 258 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~ 258 (349)
.-...+.|+|+|++. .++++-+..+.|..+|+........+...........|++.. ..++++....+ .|..+|.
T Consensus 538 ~l~~PnGlavd~~~~--~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~-~V~~~d~ 612 (699)
T 1n7d_A 538 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINE-AIFSANR 612 (699)
T ss_dssp SCSSCCCEEECTTTC--CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTT-CEEEEET
T ss_pred CCCCccEEEEeccCC--EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCC-eEEEEEc
Confidence 223467899998763 566666777899999997643333322111223345566654 34444444455 5999887
Q ss_pred cCCCcceeEeecCCcceEEEEEe
Q psy17688 259 RVPCTPVARLNNHRACVNGIAWA 281 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~ 281 (349)
.+ ++.+..+.........|++.
T Consensus 613 ~~-G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 613 LT-GSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp TT-EEEEECCCTTCSSCCCCCBC
T ss_pred cC-CCceEEeecCCCCCcEEEEe
Confidence 65 55555543322233444433
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.78 E-value=0.012 Score=49.16 Aligned_cols=243 Identities=12% Similarity=0.072 Sum_probs=122.5
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC----CCeEEEEEcC-
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD----PNLLGTSSID- 148 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~~d- 148 (349)
.....++|.|+++ ++++-.+ .|.+++ ++.. ...........-......++|+| + +.++++-...
T Consensus 31 ~~P~~ia~~pdG~-----l~V~e~~g~I~~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 31 EVPWALAFLPDGG-----MLIAERPGRIRLFR--EGRL--STYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAE 100 (352)
T ss_dssp SCEEEEEECTTSC-----EEEEETTTEEEEEE--TTEE--EEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECT
T ss_pred CCceEEEEcCCCe-----EEEEeCCCeEEEEE--CCCc--cEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCC
Confidence 3578999999998 7777665 888888 3221 11111111011124577899998 5 3444443332
Q ss_pred ----CeEEEEeccCcceeeeecccCCceeeeee---ccCCceeeEEEecCCCCccEEEEEcC-------------CCcEE
Q psy17688 149 ----TTCTIWCLETNQVVGRVNSVSGHVKTQLI---AHDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVR 208 (349)
Q Consensus 149 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~ 208 (349)
+.|..++........ . ......+. ........++|.|++ .++++.+. .|.|.
T Consensus 101 ~~~~~~v~r~~~~~~~~~~-~----~~l~~~~p~~~~~~h~~~~l~~~pdG---~Lyv~~G~~~~~~~~~d~~~~~g~I~ 172 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVL-D----RVVLDGIPARPHGLHSGGRIAFGPDG---MLYVTTGEVYERELAQDLASLGGKIL 172 (352)
T ss_dssp TSSEEEEEEEEECSSCEEE-E----EEEEEEECCCTTCCCCCCCEEECTTS---CEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred CCCccEEEEEEeCCCCcCc-e----EEEEEeCCCCCCCCcCCceEEECCCC---CEEEEECCCCCCccccCCCCCceEEE
Confidence 567778776432110 0 00011122 111124689999998 66666432 25666
Q ss_pred EEECCCCC-----------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-------EEEEEeccC----------
Q psy17688 209 MFDLRHLE-----------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-------EVIILDVRV---------- 260 (349)
Q Consensus 209 iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-------~i~v~d~~~---------- 260 (349)
-+|....- ....+... .......++|+|.++.++++-...+. .|.+.....
T Consensus 173 ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~ 251 (352)
T 2ism_A 173 RLTPEGEPAPGNPFLGRRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGR 251 (352)
T ss_dssp EECTTSSBCTTCTTTTCTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSC
T ss_pred EEcCCCCCCCCCcccCCCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCC
Confidence 66655310 00011111 12346789999944554444332221 133322110
Q ss_pred -----CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-CCcEEEEeccCCceEEEEEcCCCCc
Q psy17688 261 -----PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI-EDPILAYTAAGGEINQIQWGATQPD 334 (349)
Q Consensus 261 -----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 334 (349)
...++..+.. ......++| .+|.. +++.-..+.|...++....... ......+......+.++++.|+|..
T Consensus 252 ~~~~~~~~p~~~~~~-~~ap~G~~~-~~G~l-~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 252 GNDPRYRDPLYFWPQ-GFPPGNLAF-FRGDL-YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGAL 328 (352)
T ss_dssp CCCTTSCCCSEECTT-CCCEEEEEE-ETTEE-EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCE
T ss_pred CCCCCCcCCeEecCC-CCCCcceEE-ECCEE-EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcE
Confidence 0123333322 234567888 45654 6665566778888776532100 0001122122467899999999975
Q ss_pred eEEEE
Q psy17688 335 WIAIC 339 (349)
Q Consensus 335 l~~~~ 339 (349)
+++..
T Consensus 329 yv~~~ 333 (352)
T 2ism_A 329 YVTTS 333 (352)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.0091 Score=51.88 Aligned_cols=158 Identities=11% Similarity=0.036 Sum_probs=94.2
Q ss_pred ceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec---cCCceeeEEE-------ecCCCCcc
Q psy17688 128 PLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA---HDKEVYDIAF-------SRAGGGRD 196 (349)
Q Consensus 128 ~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~~~ 196 (349)
....|+|+|. .++++++-...+.|++.|+.++.... .... .......++| ++++ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-----------l~~~~~~~~~~p~~ia~~~~~~~~d~~G---~ 205 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-----------PLNINTIPTNRIRSIAFNKKIEGYADEA---E 205 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-----------EECCTTSSCSBEEEEEECCCBTTTBCTT---C
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-----------EEccCccccCCCcEEEEeecccccCCCC---C
Confidence 3457889873 34444444444678888988776641 1111 1235889999 9998 5
Q ss_pred EEEEEcCCC-------cEEEEECCC-CCce-----eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc----
Q psy17688 197 MFASVGAEG-------SVRMFDLRH-LEHS-----TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR---- 259 (349)
Q Consensus 197 ~l~~~~~d~-------~v~iwd~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~---- 259 (349)
.|+.+...+ .|.+++... +... ..+.. ......++.+|.++.++++-..++ .|..+|+.
T Consensus 206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYvtd~~~g-~V~r~d~~~~~~ 281 (496)
T 3kya_A 206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYFNSYEKG-QVFRLDLVDYFK 281 (496)
T ss_dssp EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEEEETTTT-EEEEECHHHHHH
T ss_pred EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEEEECCCC-EEEEEecccccc
Confidence 454444332 266776443 1211 12211 134567889995555555666666 69999987
Q ss_pred ---CCCcc-----------eeEe-e-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 260 ---VPCTP-----------VARL-N-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 260 ---~~~~~-----------~~~~-~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+ +.. ...+ . ........|+|+|+|..++++-+....|+.++...
T Consensus 282 ~~~t-g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 282 TIKN-GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp HHHT-TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cccC-ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 3 221 1121 1 12345689999999996455556677888877654
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.70 E-value=0.016 Score=48.35 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=122.4
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEEc---
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSSI--- 147 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~--- 147 (349)
.....++|.|+++ ++++-.+ .|.+++. ++. ...........-......++++|. ++.++++-+.
T Consensus 29 ~~P~~ia~~pdG~-----l~V~e~~g~I~~~d~-~G~---~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-----YLVTERPGRLVLISP-SGK---KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp SCEEEEEEEETTE-----EEEEETTTEEEEECS-SCE---EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred CCCeEEEEcCCCe-----EEEEeCCCEEEEEeC-CCc---eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 4578999999997 7777665 8888863 222 111111000111145778999883 2444444332
Q ss_pred C----CeEEEEeccCcc-eeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcC-------------CCcEE
Q psy17688 148 D----TTCTIWCLETNQ-VVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVR 208 (349)
Q Consensus 148 d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~ 208 (349)
+ ..|..|+..... .+... ..+...+.. .......++|.|++ .++++.+. .|.|.
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~----~~l~~~~~~~~~h~~~~l~~~pDG---~Lyvt~G~~~~~~~~~d~~~~~G~I~ 172 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFKLKEV----KTLIDGIPGAYIHNGGRIRFGPDG---MLYITTGDAADPRLAQDLSSLAGKIL 172 (354)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEE----EEEEEEEECCSSCCCCCEEECTTS---CEEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred CCCcceEEEEEEECCCCcCcCcc----EEEEEcCCCCCCcCCceEEECCCC---cEEEEECCCCCCccccCCCCCCeEEE
Confidence 3 567777765431 00000 000011211 11124689999998 66666432 24566
Q ss_pred EEECCCCCc------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccC---------------CCcce
Q psy17688 209 MFDLRHLEH------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRV---------------PCTPV 265 (349)
Q Consensus 209 iwd~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~---------------~~~~~ 265 (349)
-+|....-. ...+... .......++|+|.++.++++-...+. .|.+..... ...++
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 251 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPV 251 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred EEcCCCCCCCCCCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCE
Confidence 666543200 0011111 12345689999955555544332211 244332111 01233
Q ss_pred eEeecCCcceEEEEEe-------eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-ccCCceEEEEEcCCCCceEE
Q psy17688 266 ARLNNHRACVNGIAWA-------PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-AAGGEINQIQWGATQPDWIA 337 (349)
Q Consensus 266 ~~~~~~~~~v~~~~~~-------p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 337 (349)
..+.........+.|. .+|.+ +++.-..+.|...++...... .. ...+. .....+.++++.|+|..+++
T Consensus 252 ~~~~~~~~ap~G~~~y~g~~fp~~~G~l-~v~~~~~~~v~~~~~~~~g~~-~~-~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 252 IDTGSETWAPSGASFVHGDMFPGLRGWL-LIACLRGSMLAAVNFGDNMEV-RK-ISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp EECTTCCCCEEEEEECCSSSCGGGTTEE-EEEETTTTEEEEEEECGGGCE-EE-EEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred eecCCCCcCCcceEEECCCCCcccCCcE-EEEEcCCCEEEEEEECCCCcc-cc-eeeeccCCCCCeeEEEECCCCcEEEE
Confidence 3331123457888884 45554 666566677888887752110 00 11222 22457899999999964444
Q ss_pred E
Q psy17688 338 I 338 (349)
Q Consensus 338 ~ 338 (349)
.
T Consensus 329 ~ 329 (354)
T 3a9g_A 329 T 329 (354)
T ss_dssp E
T ss_pred E
Confidence 4
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.69 E-value=0.0055 Score=49.93 Aligned_cols=161 Identities=11% Similarity=0.107 Sum_probs=101.4
Q ss_pred eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----C--CCceeEEEE---eCCCCCeEEEE
Q psy17688 176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----Q--HTPLLRLAW---NKQDPNYLAMV 246 (349)
Q Consensus 176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~l~~~ 246 (349)
+.....-..+++|++... .++++.-..++|..||...+..... .... . ...+..+.| .| +++++++.
T Consensus 8 ~~~~~~yPE~~~wd~~~g--~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~ 83 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQ--VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVM 83 (334)
T ss_dssp ECCTTCCCSCEEEETTTT--EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEE
T ss_pred ecCcccCCcCccCcCCCC--EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCC-CCcEEEEE
Confidence 334444567899988652 4444444789999999975543333 2111 1 124578999 68 67777764
Q ss_pred ee-------------CCcEEEEEecc---CCCcceeEee--cC-----------CcceEEEEEeeCCCCEEEEEcCC-Cc
Q psy17688 247 AM-------------NACEVIILDVR---VPCTPVARLN--NH-----------RACVNGIAWAPHSSCHICTAGDD-HQ 296 (349)
Q Consensus 247 ~~-------------d~~~i~v~d~~---~~~~~~~~~~--~~-----------~~~v~~~~~~p~~~~~l~~~~~d-~~ 296 (349)
.. +. .+..||+. + ++.+.... .. ......++..++|.. .++++.- +.
T Consensus 84 ~~~~af~~~g~~~~g~~-~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-YVt~s~~~~~ 160 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGAS-SFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-YVAFALGMPA 160 (334)
T ss_dssp EETTTTCTTSCCSSSCC-EEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-EEEEEESSCE
T ss_pred cccccccccccccCCCC-EEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCCE-EEeCCCCCCe
Confidence 42 45 59999998 5 44444332 11 124789999999997 7777766 66
Q ss_pred EEEEEeecCCCCCCCcEEEEe-c-----cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688 297 ALIWDIQQMPRAIEDPILAYT-A-----AGGEINQIQWGATQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 297 v~iwd~~~~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v 349 (349)
|...+.... .+..+. . .....+.|+++|++..|++...++.+..+++
T Consensus 161 I~rV~pdG~------~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 161 IARVSADGK------TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEECTTSC------CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred EEEEeCCCC------EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 555444331 112121 1 1224679999999998888877888887764
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.59 E-value=0.023 Score=47.35 Aligned_cols=245 Identities=11% Similarity=0.050 Sum_probs=117.9
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE----ecCCCCeeEEEEecC---CCCCCCcEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST----IDHPYPTTKIMWIPD---RKGVFPDLLA 95 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~~~~~~l~ 95 (349)
.....++|.| ||+ |.++.. .|.|.+++ + ++...... .........|+|+|+ +.. +.+
T Consensus 31 ~~P~~ia~~p--dG~--l~V~e~----~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~----lYv 94 (352)
T 2ism_A 31 EVPWALAFLP--DGG--MLIAER----PGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPY----VYA 94 (352)
T ss_dssp SCEEEEEECT--TSC--EEEEET----TTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEE
T ss_pred CCceEEEEcC--CCe--EEEEeC----CCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCE----EEE
Confidence 4567899998 997 555555 68888886 2 22111111 112356899999998 332 444
Q ss_pred EeC-------CcEEEEECCCCCch-hheeccC-C--CCCCCcCceeEEEecCCCCCeEEEEEcC-------------CeE
Q psy17688 96 TSG-------DYLRVWRAGEPETR-LECILNN-N--KNSDFCAPLTSFDWNEVDPNLLGTSSID-------------TTC 151 (349)
Q Consensus 96 ~~~-------~~i~vw~~~~~~~~-~~~~~~~-~--~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------g~i 151 (349)
+-. +.|..|+....... .+.++.. . ....| ....+.|.| ++.++++-+.. |.|
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I 171 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKI 171 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEE
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECC-CCCEEEEECCCCCCccccCCCCCceEE
Confidence 433 35666776543110 1111111 1 11122 224789988 77766664321 455
Q ss_pred EEEeccCcceeeeeccc---CCceeee-eeccCCceeeEEEec-CCCCccEEEEEcCCCcE------EEEECCCCCc---
Q psy17688 152 TIWCLETNQVVGRVNSV---SGHVKTQ-LIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSV------RMFDLRHLEH--- 217 (349)
Q Consensus 152 ~iwd~~~~~~~~~~~~~---~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v------~iwd~~~~~~--- 217 (349)
.-++... +... -++. .+..... ..++ .....++|+| .+ .++++-.....+ .+.-+..+..
T Consensus 172 ~ri~~dG-~~p~-~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g---~l~v~d~g~~~~~~~~~dei~~i~~G~nyGw 245 (352)
T 2ism_A 172 LRLTPEG-EPAP-GNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTG---ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGW 245 (352)
T ss_dssp EEECTTS-SBCT-TCTTTTCTTSCTTEEEECC-SEECCCEECTTTC---CEEEEEECC------CCCEEEEECTTCBCCT
T ss_pred EEEcCCC-CCCC-CCcccCCCCCCccEEEEcC-CCcccEEEECCCC---CEEEEEcCCCCCCCCCCeEEEEeccCCcCCC
Confidence 5555442 1100 0000 0000011 2233 3478899999 55 555544333321 1222222210
Q ss_pred ------------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc-----eeEeecCCcceEEEEE
Q psy17688 218 ------------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP-----VARLNNHRACVNGIAW 280 (349)
Q Consensus 218 ------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~-----~~~~~~~~~~v~~~~~ 280 (349)
...............++|. ++.++++.-..+ .|...++...... ...+......+..+++
T Consensus 246 p~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 322 (352)
T 2ism_A 246 PRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQ-ALLRLVLEGERGRWRVLRVETALSGFGRLREVQV 322 (352)
T ss_dssp TTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTT-EEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEE
T ss_pred CcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCC-EEEEEEECCCCcceeecchheecccCCCeeEEEE
Confidence 0011111122345667773 566555544555 5888877642211 1222222357889999
Q ss_pred eeCCCCEEEEEcCCC
Q psy17688 281 APHSSCHICTAGDDH 295 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~ 295 (349)
.|+|..++++...+|
T Consensus 323 ~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 323 GPDGALYVTTSNRDG 337 (352)
T ss_dssp CTTSCEEEEECSTTT
T ss_pred CCCCcEEEEEeCCCC
Confidence 999976333333343
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.59 E-value=0.039 Score=49.84 Aligned_cols=160 Identities=8% Similarity=-0.013 Sum_probs=100.0
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS 206 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~ 206 (349)
..+.+++|.+.++.++++-...+.|..+++...... ..+...-.....+++.+.+. +++++-+..+.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~-----------~v~~~~~~~p~GlAvD~~~~--~lY~tD~~~~~ 415 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ-----------FVVTAQIAHPDGIAVDWVAR--NLYWTDTGTDR 415 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSCCCEEEEETTTT--EEEEEETTTTE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE-----------EEEECCCCCcCceEEecccC--cEEEEeCCCCc
Confidence 346689998744555555556788888888754332 12222234677899987542 67777777889
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHS 284 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~ 284 (349)
|.+.++...... .+.. ..-.....++++|..+.++.+-.. .. .|...++. +.....+ ...-...+.|++++++
T Consensus 416 I~v~~~~G~~~~-~l~~-~~l~~P~~iavdp~~G~ly~tD~g~~~-~I~r~~~d--G~~~~~l~~~~l~~P~GlalD~~~ 490 (619)
T 3s94_A 416 IEVTRLNGTMRK-ILIS-EDLEEPRAIVLDPMVGYMYWTDWGEIP-KIERAALD--GSDRVVLVNTSLGWPNGLALDYDE 490 (619)
T ss_dssp EEEEETTSCSCE-EEEC-TTCCSEEEEEEETTTTEEEEEECSSSC-EEEEEETT--SCSCEEEECSSCSCEEEEEEETTT
T ss_pred EEEEeCCCCeEE-EEEE-CCCCCeeeEEEEcCCCcEEEecCCCCC-EEEEEccC--CCccEEEEeCCCCCCeeeEEcccC
Confidence 999999865432 2322 234568999999943444444322 24 46666665 3323333 2234567899999987
Q ss_pred CCEEEEEcCCCcEEEEEeec
Q psy17688 285 SCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 285 ~~~l~~~~~d~~v~iwd~~~ 304 (349)
..+..+=+..+.|...++..
T Consensus 491 ~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 491 GKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp TEEEEEETTTTEEEEEESSS
T ss_pred CEEEEEECCCCEEEEEecCC
Confidence 77455545567888888765
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.56 E-value=0.022 Score=46.17 Aligned_cols=238 Identities=8% Similarity=0.088 Sum_probs=143.8
Q ss_pred EeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCC
Q psy17688 30 WSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGE 108 (349)
Q Consensus 30 ~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~ 108 (349)
.+| ..+ .||.-. ...++|++++.. ..+. ......+|.-=+|-.+. .|+--. ..|.-|+++.
T Consensus 74 MnP--~~~-ViALra-----g~~LQiFnletK--~klk--s~~~~e~VvfWkWis~~------~L~lVT~taVyHWs~~~ 135 (365)
T 2xzh_A 74 MNP--ASK-VIALKA-----GKTLQIFNIEMK--SKMK--AHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEG 135 (365)
T ss_dssp ECS--SSS-EEEEEE-----TTEEEEEETTTT--EEEE--EEECSSCEEEEEECSSS------EEEEEESSEEEEEESST
T ss_pred eCC--Ccc-EEEEec-----CCeEEEechHHh--hhhc--ceecCCccEEEEecCCC------eEEEEcCCcEEEEcccC
Confidence 355 556 366643 578999999644 2222 23345688888888777 455555 4999999976
Q ss_pred CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688 109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181 (349)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
.. .+...+..|..-. ...|....-++ +.+.++..+ -.|.+.+|..+.+.. +.+.+|..
T Consensus 136 ~s-~P~kvFdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s------------Q~ieGhaa 200 (365)
T 2xzh_A 136 ES-QPVKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAA 200 (365)
T ss_dssp TC-CCEEEEECCGGGT-TCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTEE------------EEECCSEE
T ss_pred CC-CCceeeecchhcc-cceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeeccccc------------ceeeeeee
Confidence 43 2344444443222 25666666666 666554433 236788888876655 35677765
Q ss_pred ceeeEEEecCCCCccEEEEEcC---CCcEEEEECCCC---C-----ceeeeeeC--CCCCceeEEEEeCCCCCeEEEEee
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGA---EGSVRMFDLRHL---E-----HSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~---~-----~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
....+...-......+++.+.. .+.+++.++... . ....+... ...+-..++..++ .-..++.-+.
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK 279 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITK 279 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEET
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeC
Confidence 5444433221111134444433 268999998543 1 11111111 1223356788887 7788889999
Q ss_pred CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 249 d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
-| .+++||+.+ +.++..-+-....|-.-+-+....- ++.....|.|.--.++.
T Consensus 280 ~G-~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 280 YG-YIHLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp TS-EEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECT
T ss_pred Cc-EEEEEEccc-CcEEEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECc
Confidence 99 799999998 8888777666677765555555455 55556788777666654
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.55 E-value=0.026 Score=46.56 Aligned_cols=275 Identities=6% Similarity=-0.017 Sum_probs=136.6
Q ss_pred CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-e-cCCCCeeEEEEecCCCCCCCcEEEEeCC
Q psy17688 22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-I-DHPYPTTKIMWIPDRKGVFPDLLATSGD 99 (349)
Q Consensus 22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~~~~~l~~~~~ 99 (349)
...+.++.|.+ ++.. +|+|. .|.| |.............. . .....+.+|.|.+ +. +++.+..
T Consensus 35 ~~~~~~v~~~~--~~~~-~~~G~-----~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-----~~~~g~~ 98 (327)
T 2xbg_A 35 TATILDMSFID--RHHG-WLVGV-----NATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-----GWIVGEP 98 (327)
T ss_dssp SSCEEEEEESS--SSCE-EEEET-----TTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-----EEEEEET
T ss_pred CCcEEEEEECC--CCcE-EEEcC-----CCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-----EEEEECC
Confidence 46789999875 5653 66553 4554 322222112222111 0 1234689999986 33 5555544
Q ss_pred cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688 100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179 (349)
Q Consensus 100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
. .||...++........... .....+..+.+.+ ++..+++ +.+|.|.. ..+.++.-. ......
T Consensus 99 g-~i~~S~DgG~tW~~~~~~~---~~~~~~~~i~~~~-~~~~~~~-~~~g~v~~-S~DgG~tW~----------~~~~~~ 161 (327)
T 2xbg_A 99 P-IMLHTTDGGQSWSQIPLDP---KLPGSPRLIKALG-NGSAEMI-TNVGAIYR-TKDSGKNWQ----------ALVQEA 161 (327)
T ss_dssp T-EEEEESSTTSSCEECCCCT---TCSSCEEEEEEEE-TTEEEEE-ETTCCEEE-ESSTTSSEE----------EEECSC
T ss_pred C-eEEEECCCCCCceECcccc---CCCCCeEEEEEEC-CCCEEEE-eCCccEEE-EcCCCCCCE----------EeecCC
Confidence 2 2333333222222211110 1113456676654 4445554 44565432 122233321 112234
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR 259 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~ 259 (349)
...+..+.+.|++ .+++.+...+..+-.|-. ++.-..+. ......+..+.+.+ ++.++ ..+.+| .+++.+..
T Consensus 162 ~~~~~~~~~~~~~---~~~~~g~~G~~~~S~d~g-G~tW~~~~-~~~~~~~~~~~~~~-~g~~~-~~~~~G-~~~~s~~D 233 (327)
T 2xbg_A 162 IGVMRNLNRSPSG---EYVAVSSRGSFYSTWEPG-QTAWEPHN-RTTSRRLHNMGFTP-DGRLW-MIVNGG-KIAFSDPD 233 (327)
T ss_dssp CCCEEEEEECTTS---CEEEEETTSSEEEEECTT-CSSCEEEE-CCSSSCEEEEEECT-TSCEE-EEETTT-EEEEEETT
T ss_pred CcceEEEEEcCCC---cEEEEECCCcEEEEeCCC-CCceeECC-CCCCCccceeEECC-CCCEE-EEeCCc-eEEEecCC
Confidence 4568889999887 677666554444444431 22222222 23456788899988 66655 445567 47766321
Q ss_pred CCCcceeEee----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---ccCCceEEEEEcCCC
Q psy17688 260 VPCTPVARLN----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---AAGGEINQIQWGATQ 332 (349)
Q Consensus 260 ~~~~~~~~~~----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 332 (349)
. ++.-..+. .+...+..+.+.+++.. ++++ .+|.+ ++....+.. -.... .....+.++.|.+++
T Consensus 234 ~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~-~~~g-~~g~i-~~S~DgG~t-----W~~~~~~~~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 234 N-SENWGELLSPLRRNSVGFLDLAYRTPNEV-WLAG-GAGAL-LCSQDGGQT-----WQQDVDVKKVPSNFYKILFFSPD 304 (327)
T ss_dssp E-EEEECCCBCTTSSCCSCEEEEEESSSSCE-EEEE-STTCE-EEESSTTSS-----CEECGGGTTSSSCCCEEEEEETT
T ss_pred C-CCeeEeccCCcccCCcceEEEEecCCCEE-EEEe-CCCeE-EEeCCCCcc-----cEEcCccCCCCCCeEEEEEECCC
Confidence 1 22111111 12235888999887664 5554 46766 333332211 01111 123467888887655
Q ss_pred CceEEEEcCCeEEEe
Q psy17688 333 PDWIAICYNKYLEVL 347 (349)
Q Consensus 333 ~~l~~~~~d~~v~vw 347 (349)
. +++++.+|.|.-+
T Consensus 305 ~-~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 305 Q-GFILGQKGILLRY 318 (327)
T ss_dssp E-EEEECSTTEEEEE
T ss_pred c-eEEEcCCceEEEE
Confidence 4 7788888877654
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.52 E-value=0.012 Score=49.49 Aligned_cols=134 Identities=13% Similarity=0.223 Sum_probs=88.4
Q ss_pred CcEEEEECCCCCceeeeeeCC--CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC---c--------ceeEeec-
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDP--QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC---T--------PVARLNN- 270 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~---~--------~~~~~~~- 270 (349)
+.||.-++.....-+.+.... .-..+..+..+| +|.+||..+..+ |.|..+.... . ..+.+.-
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g~~~--V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFNDNE--IFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEECSSE--EEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEecCCe--EEEEEecCccccCcccccccccceeEEEcC
Confidence 677777777433222222221 223688899999 999999998774 9998886311 0 1122322
Q ss_pred -----CCcceEEEEEeeCC---CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---------ccCCceEEEEEcCCCC
Q psy17688 271 -----HRACVNGIAWAPHS---SCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---------AAGGEINQIQWGATQP 333 (349)
Q Consensus 271 -----~~~~v~~~~~~p~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~ 333 (349)
...+|..+.|+|-+ .. |++-..|+.|++||+.... .+|. .++ .....|.+++|..++-
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~-LVVLtsD~~Ir~yDl~~s~---~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSC-IVVLKEDDTITMFDILNSQ---EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCE-EEEEETTSCEEEEETTCTT---SCCE-EESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred CcccCCCCceeEEEeccccCCCCe-EEEEecCCEEEEEEcccCC---CCCc-chhccccccCCCcccceEEEEEEcCCCc
Confidence 24679999999964 45 8888899999999998732 2233 222 1225788999999887
Q ss_pred ceEEEE--cCCeEEE
Q psy17688 334 DWIAIC--YNKYLEV 346 (349)
Q Consensus 334 ~l~~~~--~d~~v~v 346 (349)
.|.+.+ .+|.|+-
T Consensus 193 TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 193 TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CEEEEECTTSCEEEE
T ss_pred EEEEEecCCCCCEEE
Confidence 777755 5677754
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.50 E-value=0.031 Score=46.39 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=100.2
Q ss_pred cCCeEEEEeccCcce-eeeecccCCceeee-eeccCCceeeEEEecCCCCc-cEEEEEcC--CCcEEEEECCCCCce-ee
Q psy17688 147 IDTTCTIWCLETNQV-VGRVNSVSGHVKTQ-LIAHDKEVYDIAFSRAGGGR-DMFASVGA--EGSVRMFDLRHLEHS-TI 220 (349)
Q Consensus 147 ~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~-~~ 220 (349)
.+|.|.++|+.+... ...+. .... +....-....+.+.++..+. .++++-.. +..+.+|++...... ..
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~-----~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELE-----IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECE-----EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE
T ss_pred CCCeEEEEecCCCCCceEEEE-----ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE
Confidence 689999999874321 11110 0000 11123456778876641111 24444333 467888877654222 22
Q ss_pred eee--CCCCCceeEEEEeCCCCCeEEEEee-----------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEe
Q psy17688 221 IYE--DPQHTPLLRLAWNKQDPNYLAMVAM-----------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWA 281 (349)
Q Consensus 221 ~~~--~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~ 281 (349)
+.. ...-...+.+.+.+ ++.+.++... .+ .|.-+|. ++ +..+...-...+.++|+
T Consensus 156 ~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g-~vyr~d~---~~-~~~~~~~l~~pNGia~s 229 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWS-FVTYYSP---ND-VRVVAEGFDFANGINIS 229 (355)
T ss_dssp EEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCE-EEEEECT---TC-CEEEEEEESSEEEEEEC
T ss_pred EeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCcc-EEEEEEC---Ce-EEEeecCCcccCcceEC
Confidence 211 12234578899999 7877666541 13 3555554 22 33333223456899999
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEEcC
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAICYN 341 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 341 (349)
||++.+.++-+..+.|..|++...... .....+.. .+..-.++..+ +|..++++..+
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~~~g~l--~~~~~~~~-~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKHANWTL--TPLRVLSF-DTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEC-SSEEEEEEECTTTCCEEEEEESC
T ss_pred CCCCEEEEEeCCCCeEEEEEECCCCcE--ecCEEEeC-CCCCceEEEeCCCCcEEEEecCC
Confidence 999985666667889999999742110 11223322 55678899999 58866655433
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.41 E-value=0.068 Score=48.35 Aligned_cols=222 Identities=8% Similarity=-0.025 Sum_probs=131.2
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA 127 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 127 (349)
.+.|+..+++... .........-..+..++|.+.... ++.+-. + .|..++++.... ........ .
T Consensus 14 ~~~I~~i~l~~~~--~~~~~~~~~~~~~~~l~~d~~~~~----lywtD~~~~~I~r~~~~g~~~--~~v~~~g~-----~ 80 (628)
T 4a0p_A 14 RADIRRISLETNN--NNVAIPLTGVKEASALDFDVTDNR----IYWTDISLKTISRAFMNGSAL--EHVVEFGL-----D 80 (628)
T ss_dssp TTEEEEEESSCTT--CEEECCCCSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCSC--EEEECSSC-----S
T ss_pred CCcEEEEECCCCC--cceEEEcCCCCceEEEEEECCCCE----EEEEECCCCeEEEEECCCCCc--EEEEeCCC-----C
Confidence 6788888886432 111111223346889999997663 444443 3 888888875432 22222111 2
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE-cCCCc
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GAEGS 206 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~~ 206 (349)
....+++.+..++++++-...+.|.+.++...... ......-....++++.|... .++.+- +..+.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-----------~l~~~~l~~P~~iavdp~~G--~lY~tD~g~~~~ 147 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-----------VLVWKDLDSPRALALDPAEG--FMYWTEWGGKPK 147 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-----------EEECSSCCCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-----------EEEeCCCCCcccEEEccCCC--eEEEeCCCCCCE
Confidence 34456666545566666666788999998654332 11223334578999998651 444443 23568
Q ss_pred EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
|...++......... ..-.....+++++ .+..|+.+......|..+|+..... ..+...-.....+++.. ..
T Consensus 148 I~r~~~dG~~~~~l~---~~~~~P~GlalD~-~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~--~~ 219 (628)
T 4a0p_A 148 IDRAAMDGSERTTLV---PNVGRANGLTIDY-AKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ--DY 219 (628)
T ss_dssp EEEEETTSCSCEEEE---CSCSSEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET--TE
T ss_pred EEEEeCCCCceEEEE---CCCCCcceEEEcc-ccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC--CE
Confidence 888888765443333 2345678999999 6666666655443699999875222 33333334456777753 44
Q ss_pred EEEEEcCCCcEEEEEeecC
Q psy17688 287 HICTAGDDHQALIWDIQQM 305 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~ 305 (349)
++.+-...+.|...|..++
T Consensus 220 ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 220 IYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEEETTTTEEEEEETTTC
T ss_pred EEEecCCCCEEEEEECCCC
Confidence 3566556788888886553
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.34 E-value=0.13 Score=50.00 Aligned_cols=186 Identities=9% Similarity=0.105 Sum_probs=108.2
Q ss_pred CCeEEEEE----------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688 139 PNLLGTSS----------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR 208 (349)
Q Consensus 139 ~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~ 208 (349)
..+|++|. ..|.|.++++..++... +. -....++|++++-- .+ .++++. .++|+
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~l---------v~-~~~v~g~v~al~~~-~g---~Lla~i--g~~l~ 907 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQT---------VA-EKEVKGAVYSMVEF-NG---KLLASI--NSTVR 907 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEE---------EE-EEEESSCEEEEEEE-TT---EEEEEE--TTEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEE---------EE-EEEcCCcCEEEeee-CC---EEEEEc--CCEEE
Confidence 46888886 34789999987443321 11 12345678887643 34 444443 47899
Q ss_pred EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcceEEEEEeeCCCC
Q psy17688 209 MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACVNGIAWAPHSSC 286 (349)
Q Consensus 209 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~ 286 (349)
+|++...+...... ..-..+..+.... .++++++|..-.+ |.++..+.....+..+. .+..+++++.+-.++ .
T Consensus 908 vy~l~~~~~L~~~~--~~~~~i~~~~l~~-~~~~I~vgD~~~S-v~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t 982 (1158)
T 3ei3_A 908 LYEWTTEKELRTEC--NHYNNIMALYLKT-KGDFILVGDLMRS-VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-N 982 (1158)
T ss_dssp EEEECTTSCEEEEE--EECCCSCEEEEEE-ETTEEEEEESSBC-EEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-E
T ss_pred EEECCCCceEEEEe--eccccEEEEEEec-cCCEEEEEEhhhe-EEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-c
Confidence 99998754332111 0111133323333 5678888888774 88776654333344332 245678888887654 4
Q ss_pred EEEEEcCCCcEEEEEeecCCCCCC--Cc---EEEEeccCCceEEEE---EcCC---------CCceEEEEcCCeEEEe
Q psy17688 287 HICTAGDDHQALIWDIQQMPRAIE--DP---ILAYTAAGGEINQIQ---WGAT---------QPDWIAICYNKYLEVL 347 (349)
Q Consensus 287 ~l~~~~~d~~v~iwd~~~~~~~~~--~~---~~~~~~~~~~v~~~~---~~~~---------~~~l~~~~~d~~v~vw 347 (349)
++.+..+|.+.+........... .. ...|.. +..|+++. +.+. .+.++.++.+|.|.+.
T Consensus 983 -~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhl-G~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 983 -FLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL-GEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp -EEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEEC-SSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred -EEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeC-CCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 77789999999988766322111 11 122222 56777765 3332 2247778888888764
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.31 E-value=0.061 Score=45.49 Aligned_cols=235 Identities=9% Similarity=0.099 Sum_probs=144.9
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL 113 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~ 113 (349)
..+. ||.-. ...++|++++.. ... .......+|.-=+|-.+. .|+--.+ .|.-|+++... .+
T Consensus 76 ~~~i-iALra-----g~~lQiFnle~K--~kl--ks~~~~e~VvfWkWis~~------~l~lVT~taVyHWsi~~~s-~P 138 (494)
T 1bpo_A 76 ASKV-IALKA-----GKTLQIFNIEMK--SKM--KAHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEGES-QP 138 (494)
T ss_dssp SSSC-EEEEE-----TTEEEEEETTTT--EEE--EEEECSSCCCEEEEEETT------EEEEECSSEEEEEESSSSC-CC
T ss_pred CCcE-EEEec-----CCeEEEEchHHh--hhh--cceecCCCceEEEecCCC------eEEEEcCCeeEEecccCCC-Cc
Confidence 5563 66643 688999999643 112 122345578888888777 5665555 99999997643 33
Q ss_pred heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE
Q psy17688 114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI 186 (349)
Q Consensus 114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (349)
...+..|..-. ...|....-++ +.+.++..+ -.|.+.+|..+.+.. +.+.+|......+
T Consensus 139 ~kvFdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s------------Q~ieGhaa~F~~~ 204 (494)
T 1bpo_A 139 VKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQF 204 (494)
T ss_dssp EEEEECCGGGT-TCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTCCE------------EEECCSEEEEEEE
T ss_pred hhheecchhcc-cceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecccccc------------chheeeeeeeEEE
Confidence 44444443222 25666666676 666555433 236788898877655 3567777655544
Q ss_pred EEecCCCCccEEEEEcC---CCcEEEEECCCC--------CceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 187 AFSRAGGGRDMFASVGA---EGSVRMFDLRHL--------EHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 187 ~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
...-......+++.+.. .+.+++.++... +....+... ...+-..++..++ .-..++.-+.-| .+
T Consensus 205 ~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G-~i 282 (494)
T 1bpo_A 205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG-YI 282 (494)
T ss_dssp ECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTS-EE
T ss_pred ecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCc-eE
Confidence 44322111134554443 378999998653 111111111 1223356788888 788888999999 79
Q ss_pred EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
++||+.+ +.++..-+-....|-.-+-+....- ++.....|.|.--.++.
T Consensus 283 ~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 283 HLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEETTT-CCEEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECT
T ss_pred EEEeccc-ceeeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEcc
Confidence 9999998 7777776666667765555555555 55566788776666654
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.25 E-value=0.056 Score=43.89 Aligned_cols=290 Identities=10% Similarity=0.146 Sum_probs=156.1
Q ss_pred CCCccccceeeeeecCC-cee-----eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEE
Q psy17688 7 GVPPTTQKEIYKYEAPW-PLY-----SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKI 80 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-~v~-----~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (349)
+..|....++..+..-+ ... ++.+. ..+| +.+--. .+.+..|.|.|+..... ........ -+.
T Consensus 4 ~~~PI~~~e~~~L~~lGI~~~~i~f~~lTmE---SDky-icVrE~-~~~~~~VvIiDl~n~~~--~~Rrpi~A----dsA 72 (365)
T 2xzh_A 4 QILPIRFQEHLQLQNLGINPANIGFSTLTME---SDKF-ICIREK-VGEQAQVVIIDMNDPSN--PIRRPISA----DSA 72 (365)
T ss_dssp TCCSEEEEEEEEGGGGTCCGGGCSTTTEEEE---ETTE-EEEEEE-ETTEEEEEEEETTSTTS--CEEEECCC----SEE
T ss_pred CCCCceEEEeeehhhcCCCccccccceeeee---cCce-EEEEec-CCCCCEEEEEECCCCCC--cccccccc----cee
Confidence 34566677777665441 222 23333 3565 665432 12345788888865422 22222222 233
Q ss_pred EEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc
Q psy17688 81 MWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN 159 (349)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 159 (349)
--+|..+ ++|.-.+ .+.+||+++........+. .+|.-=.| .+.+.|+-.+. ..|.-|++...
T Consensus 73 IMnP~~~-----ViALrag~~LQiFnletK~klks~~~~--------e~VvfWkW--is~~~L~lVT~-taVyHWs~~~~ 136 (365)
T 2xzh_A 73 IMNPASK-----VIALKAGKTLQIFNIEMKSKMKAHTMT--------DDVTFWKW--ISLNTVALVTD-NAVYHWSMEGE 136 (365)
T ss_dssp EECSSSS-----EEEEEETTEEEEEETTTTEEEEEEECS--------SCEEEEEE--CSSSEEEEEES-SEEEEEESSTT
T ss_pred eeCCCcc-----EEEEecCCeEEEechHHhhhhcceecC--------CccEEEEe--cCCCeEEEEcC-CcEEEEcccCC
Confidence 4588887 8887776 9999999986422222221 46665667 35666666665 58999999753
Q ss_pred ceeeeecccCCceeeeeeccC----CceeeEEEecCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688 160 QVVGRVNSVSGHVKTQLIAHD----KEVYDIAFSRAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHT 228 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~ 228 (349)
.... +.+..|. ..|..-..+++. ++++..+ -.|.+.+|..+.... +.+ + .|..
T Consensus 137 s~P~----------kvFdR~~~L~~~QIInY~~d~~~---kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~i-e-Ghaa 200 (365)
T 2xzh_A 137 SQPV----------KMFDRHSSLAGCQIINYRTDAKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI-E-GHAA 200 (365)
T ss_dssp CCCE----------EEEECCGGGTTCEEEEEEECTTS---CEEEEEEEEEETTEEEEEEEEEETTTTEE-EEE-C-CSEE
T ss_pred CCCc----------eeeecchhcccceEEEEEECCCC---CEEEEEeEeccCCccceeEEEEeeccccc-cee-e-eeee
Confidence 3221 2333332 346666667776 5655544 236788999886432 222 1 2222
Q ss_pred ceeEEEEe--CCCCCeEEEEeeC--CcEEEEEeccCC--Cccee------Eee---cCCcceEEEEEeeCCCCEEEEEcC
Q psy17688 229 PLLRLAWN--KQDPNYLAMVAMN--ACEVIILDVRVP--CTPVA------RLN---NHRACVNGIAWAPHSSCHICTAGD 293 (349)
Q Consensus 229 ~v~~~~~~--~~~~~~l~~~~~d--~~~i~v~d~~~~--~~~~~------~~~---~~~~~v~~~~~~p~~~~~l~~~~~ 293 (349)
....+... +....+++.+... |..+++.++..+ +.+.. .+. ...+-..++..++.... +..-+.
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygv-iyviTK 279 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITK 279 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTE-EEEEET
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCE-EEEEeC
Confidence 22111111 1011233333331 125999998543 22111 111 11334456777766665 777788
Q ss_pred CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEE
Q psy17688 294 DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLE 345 (349)
Q Consensus 294 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 345 (349)
-|.+++||++++ .++..-+-..+.|..-+-+.....++.....|.|.
T Consensus 280 ~G~ihlyDleTg-----t~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 280 YGYIHLYDLETG-----TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp TSEEEEEETTTC-----CEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred CcEEEEEEcccC-----cEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 999999999994 34544444455665555544434466666666553
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.18 E-value=0.07 Score=45.04 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=93.2
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecC---CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCC
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH---PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPE 110 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~ 110 (349)
+|. .|+++. ++.|+.-++.++. .+... ...+ -..|..+..+|+|+ +||..++ .|.|-.+..+.
T Consensus 31 n~t-~i~~a~-----~n~iR~~~i~~~~-~Yk~L-~~~~~i~f~~i~qlvlSpsG~-----lLAl~g~~~V~Vv~LP~~~ 97 (452)
T 3pbp_A 31 NGT-RIVFIQ-----DNIIRWYNVLTDS-LYHSL-NFSRHLVLDDTFHVISSTSGD-----LLCLFNDNEIFVMEVPWGY 97 (452)
T ss_dssp TTT-EEEEEE-----TTEEEEEETTTCS-SCEEE-ECTTTCCCCTTCEEEECTTSS-----EEEEECSSEEEEEECCTTC
T ss_pred CCC-EEEEEE-----CCEEEEEECCCCC-cceEE-ecCcccccCceeEEEECCCCC-----EEEEecCCeEEEEEecCcc
Confidence 454 355543 5778887776543 23222 1221 23688999999999 9998887 99998887332
Q ss_pred chh---------he-eccCC-CCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCccee-eeecccCCceeeee
Q psy17688 111 TRL---------EC-ILNNN-KNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVV-GRVNSVSGHVKTQL 176 (349)
Q Consensus 111 ~~~---------~~-~~~~~-~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~ 176 (349)
... +. ..... .......+|..+.|+|.. +..|++-..|+.|++||+...... ..++.... ...+
T Consensus 98 ~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~--~fg~ 175 (452)
T 3pbp_A 98 SNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN--SFGL 175 (452)
T ss_dssp SCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS--EEES
T ss_pred ccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc--ccCC
Confidence 100 00 01110 111123689999999843 458999999999999999863221 01110000 0111
Q ss_pred eccCCceeeEEEecCCCCccEEEE--EcCCCcEEEE
Q psy17688 177 IAHDKEVYDIAFSRAGGGRDMFAS--VGAEGSVRMF 210 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iw 210 (349)
......|.+++|.+++ -.|.. .+..|.|+-.
T Consensus 176 d~~~~ev~S~~Fg~~~---lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 176 DARVNDITDLEFSKDG---LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CSSCCCEEEEEECTTS---SCEEEEECTTSCEEEEE
T ss_pred CcccceEEEEEEcCCC---cEEEEEecCCCCCEEEE
Confidence 2233678899999876 45555 4477877654
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.10 E-value=0.094 Score=43.71 Aligned_cols=239 Identities=7% Similarity=-0.032 Sum_probs=118.0
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe----cCCCCeeEEEEecC---CCCCCCcEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI----DHPYPTTKIMWIPD---RKGVFPDLLA 95 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~~~~~l~ 95 (349)
.....++|.| ||+ |.++.. .|.|.+++- .+. .....+ ........|+++|+ +.. +.+
T Consensus 29 ~~P~~ia~~p--dG~--l~V~e~----~g~I~~~d~---~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lyv 92 (354)
T 3a9g_A 29 EVPWSIAPLG--GGR--YLVTER----PGRLVLISP---SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSW----VYL 92 (354)
T ss_dssp SCEEEEEEEE--TTE--EEEEET----TTEEEEECS---SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEE
T ss_pred CCCeEEEEcC--CCe--EEEEeC----CCEEEEEeC---CCc-eEeeccceeecCCCceeeEEeCCCCCcCCE----EEE
Confidence 5678999999 996 566655 688888852 233 111111 12356899999997 332 444
Q ss_pred EeC---------CcEEEEECCCCCch---hheeccC-CCCCCCcCceeEEEecCCCCCeEEEEEcC-------------C
Q psy17688 96 TSG---------DYLRVWRAGEPETR---LECILNN-NKNSDFCAPLTSFDWNEVDPNLLGTSSID-------------T 149 (349)
Q Consensus 96 ~~~---------~~i~vw~~~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------g 149 (349)
+-. +.|..|+....... .+.++.. .....| ....+.|.| ++.++++-+.. |
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G 169 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAG 169 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSS
T ss_pred EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECC-CCcEEEEECCCCCCccccCCCCCCe
Confidence 332 25666666543100 1111111 111112 234688988 88776664321 3
Q ss_pred eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCC---cEEEEECCCCCc--------
Q psy17688 150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEG---SVRMFDLRHLEH-------- 217 (349)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~---~v~iwd~~~~~~-------- 217 (349)
.|.-++.... ... -++.. .......++. ....++|+| .+ +++++-.... .|.+.. .+..
T Consensus 170 ~I~ri~~dG~-~p~-~npf~-~~~i~a~G~r-np~Gla~d~~~g---~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g 240 (354)
T 3a9g_A 170 KILRVDEEGR-PPA-DNPFP-NSPIWSYGHR-NPQGIDWHRASG---VMVATEHGPVGHDEVNIIL--KGGNYGWPLATG 240 (354)
T ss_dssp EEEEECTTSC-CCT-TSSST-TCCEEEECCS-CCCEEEECTTTC---CEEEEECCSSSCCEEEEEC--TTCBCCTTTCCS
T ss_pred EEEEEcCCCC-CCC-CCCCC-CCcEEEEccC-CcceEEEeCCCC---CEEEEecCCCCCcEEEEec--CCCcCCCCcccC
Confidence 4554444321 000 00000 0001123333 467899999 55 5555443322 233322 1110
Q ss_pred -------eeeeeeC-CCCCceeEEEEeC------CCCCeEEEEeeCCcEEEEEeccCCCcce--eEee-cCCcceEEEEE
Q psy17688 218 -------STIIYED-PQHTPLLRLAWNK------QDPNYLAMVAMNACEVIILDVRVPCTPV--ARLN-NHRACVNGIAW 280 (349)
Q Consensus 218 -------~~~~~~~-~~~~~v~~~~~~~------~~~~~l~~~~~d~~~i~v~d~~~~~~~~--~~~~-~~~~~v~~~~~ 280 (349)
....... ........++|.. .++.++++.-..+ .|...++...+... ..+. .....+..+++
T Consensus 241 ~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~ 319 (354)
T 3a9g_A 241 KAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGS-MLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI 319 (354)
T ss_dssp CCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTT-EEEEEEECGGGCEEEEEEECTTTSCCEEEEEE
T ss_pred CCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCC-EEEEEEECCCCcccceeeeccCCCCCeeEEEE
Confidence 0011111 1234567788832 2555655555555 58888886422221 2222 22457889999
Q ss_pred eeCCCCEEEEE
Q psy17688 281 APHSSCHICTA 291 (349)
Q Consensus 281 ~p~~~~~l~~~ 291 (349)
.|+|.. +++.
T Consensus 320 ~pDG~l-yv~~ 329 (354)
T 3a9g_A 320 DDDGGI-LIST 329 (354)
T ss_dssp CTTSCE-EEEE
T ss_pred CCCCcE-EEEE
Confidence 999965 4443
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.10 E-value=0.08 Score=42.83 Aligned_cols=146 Identities=12% Similarity=0.115 Sum_probs=73.1
Q ss_pred CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcE
Q psy17688 138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSV 207 (349)
Q Consensus 138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v 207 (349)
++.+++.|+.+ ..+.+||+.+.+-... ..+..... -.+++. .++ .+++.|+.+ ..+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~~~~~~-~~~---~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSML---------GDMQTARE-GAGLVV-ASG---VIYCLGGYDGLNILNSV 177 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEE---------EECSSCCB-SCEEEE-ETT---EEEEECCBCSSCBCCCE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEEC---------CCCCCCcc-cceEEE-ECC---EEEEECCCCCCcccceE
Confidence 56777777654 3588888877664321 11111111 112222 245 677777654 468
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCCc--ceeEeecCCcceEEEEEe
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPCT--PVARLNNHRACVNGIAWA 281 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~ 281 (349)
.+||+.+.+-.... .......-.+++.. ++.+++.|+.++ ..+.+||+.+ .. .+..+.........+.
T Consensus 178 ~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~-- 251 (301)
T 2vpj_A 178 EKYDPHTGHWTNVT-PMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRT-DSWTTVTSMTTPRCYVGATV-- 251 (301)
T ss_dssp EEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEE--
T ss_pred EEEeCCCCcEEeCC-CCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCC-CcEEECCCCCCcccceeEEE--
Confidence 89999886533221 11111112222222 567777777642 1489999875 22 1111111111112222
Q ss_pred eCCCCEEEEEcCCC-----cEEEEEeec
Q psy17688 282 PHSSCHICTAGDDH-----QALIWDIQQ 304 (349)
Q Consensus 282 p~~~~~l~~~~~d~-----~v~iwd~~~ 304 (349)
-+++. ++.|+.++ .+.+||+++
T Consensus 252 ~~~~i-~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 252 LRGRL-YAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp ETTEE-EEECCBCSSSBEEEEEEEETTT
T ss_pred ECCEE-EEEcCcCCCcccccEEEEcCCC
Confidence 24554 77777653 466777655
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.07 E-value=0.087 Score=42.74 Aligned_cols=229 Identities=10% Similarity=0.049 Sum_probs=108.1
Q ss_pred eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC------CcEEEEECCCCCc
Q psy17688 38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG------DYLRVWRAGEPET 111 (349)
Q Consensus 38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~------~~i~vw~~~~~~~ 111 (349)
+.++.|+. ...+.+.+|+.. +.+............-.++.. -++. +++.|+ +.+.+||..+...
T Consensus 13 ~l~~~GG~--~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~-~~~~-----lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 13 YRIALFGG--SQPQSCRYFNPK--DYSWTDIRCPFEKRRDAACVF-WDNV-----VYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp EEEEEECC--SSTTSEEEEETT--TTEEEECCCCSCCCBSCEEEE-ETTE-----EEEECCBSSSBCCEEEEEETTTTEE
T ss_pred eEEEEeCC--CCCceEEEecCC--CCCEecCCCCCcccceeEEEE-ECCE-----EEEEeCCCCCCcceEEEEeCCCCeE
Confidence 34677766 224567777654 333332221111111122222 2444 666665 2788888887643
Q ss_pred hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------CeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688 112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD 185 (349)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (349)
.....+. . .. .....+. .++.+++.|+.+ ..+.+||+.+.+-... ..+..... -.+
T Consensus 83 ~~~~~~p--~-~r--~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~~~ 144 (306)
T 3ii7_A 83 YSKLGPP--T-PR--DSLAACA---AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK---------PSMLTQRC-SHG 144 (306)
T ss_dssp EEEECCS--S-CC--BSCEEEE---ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE---------CCCSSCCB-SCE
T ss_pred EECCCCC--c-cc--cceeEEE---ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC---------CCCcCCcc-eeE
Confidence 2211111 1 00 1111222 256777888765 4588899887764311 00110011 111
Q ss_pred EEEecCCCCccEEEEEcC---------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cE
Q psy17688 186 IAFSRAGGGRDMFASVGA---------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CE 252 (349)
Q Consensus 186 ~~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~ 252 (349)
++. -++ .+++.|+. -..+.+||+.+.+-.... .......-.+++.. ++.+++.|+.++ ..
T Consensus 145 ~~~-~~~---~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 145 MVE-ANG---LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN 217 (306)
T ss_dssp EEE-ETT---EEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC
T ss_pred EEE-ECC---EEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-CccchhhcceEEEE--CCEEEEEeCCCCCCCCce
Confidence 222 244 67777663 345889999886433221 11111112223333 567777776532 14
Q ss_pred EEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688 253 VIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDD-----HQALIWDIQQ 304 (349)
Q Consensus 253 i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----~~v~iwd~~~ 304 (349)
+.+||+.+.. ..+..+.........+.+ ++.. ++.|+.+ ..+.+||+.+
T Consensus 218 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i-~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIV-YVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEE-EEEECBCSSSBCCEEEEEETTT
T ss_pred EEEeeCCCCcEEECCCCCCCccceeEEEE--CCEE-EEEeCcCCCeeeeeEEEEcCCC
Confidence 8899987521 111112111222222222 4554 7777754 4577777765
No 314
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.90 E-value=0.14 Score=42.22 Aligned_cols=207 Identities=11% Similarity=0.073 Sum_probs=113.5
Q ss_pred EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC----CCCCCCcEEEEeC---C-cEEEEECCCCCc
Q psy17688 40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD----RKGVFPDLLATSG---D-YLRVWRAGEPET 111 (349)
Q Consensus 40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~l~~~~---~-~i~vw~~~~~~~ 111 (349)
++.|+. +.+-+.+|+++ |+.+... . .+.++.+..-|+ ++.. +..+++.. + +|.+|+++....
T Consensus 42 ~ii~t~---k~~gL~Vydl~---G~~l~~~--~-~g~~nnVD~r~~~~l~g~~~-dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 42 KLITTN---KKSGLVVYSLD---GKMLHSY--N-TGKLNNVDIRYDFPLNGKKV-DIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp EEEEEE---TTTEEEEEETT---SCEEEEE--C-CSCEEEEEEEEEEEETTEEE-EEEEEEECSTTCCEEEEEEECTTTC
T ss_pred EEEEEc---CCCCEEEEcCC---CcEEEEc--c-CCCcccEEEecccccCCceE-eEEEEeCCCCCCCeEEEEEECCCCC
Confidence 455554 26789999984 5544332 1 256777776663 1100 00234432 3 899998753221
Q ss_pred hhheeccC--CCCCCCcCceeEEEe--cCCCCC-eEEEEEcCCeEEEEeccC---cceeeeecccCCceeeeeeccCCce
Q psy17688 112 RLECILNN--NKNSDFCAPLTSFDW--NEVDPN-LLGTSSIDTTCTIWCLET---NQVVGRVNSVSGHVKTQLIAHDKEV 183 (349)
Q Consensus 112 ~~~~~~~~--~~~~~~~~~i~~~~~--~~~~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~v 183 (349)
.+...... ..... ...+..+++ +|..+. ++++...+|.+..|++.. ++.. .+.+..+.. .+.+
T Consensus 112 ~l~~i~~~~~pv~t~-~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~-------~~lVR~f~l-gsq~ 182 (355)
T 3amr_A 112 TLQSMTDPDHPIATA-INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS-------GKKVRAFKM-NSQT 182 (355)
T ss_dssp CEEECSCTTSCEECC-CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE-------EEEEEEEEC-SSCE
T ss_pred ceeeccccccCcCCC-CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc-------ceEEEEecC-CCCc
Confidence 22222110 00000 034455666 664444 688888899999999843 2121 122244443 3468
Q ss_pred eeEEEecCCCCccEEEEEcCCCcEEEEECCCCC--ceeeee---eCCCCCceeEEEEeCC-CCC-eEEEEe-eCCcEEEE
Q psy17688 184 YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE--HSTIIY---EDPQHTPLLRLAWNKQ-DPN-YLAMVA-MNACEVII 255 (349)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~---~~~~~~~v~~~~~~~~-~~~-~l~~~~-~d~~~i~v 255 (349)
..+...+.. ..|+.+-++.-|..+|.+... ....+. .......+..|+.-+. +++ +|++++ .++ +..+
T Consensus 183 EgcvvDd~~---g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~-s~~V 258 (355)
T 3amr_A 183 EGMAADDEY---GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS-SYAI 258 (355)
T ss_dssp EEEEEETTT---TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT-EEEE
T ss_pred ceEEEcCCC---CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC-EEEE
Confidence 888888877 688889888777777755221 111221 1223346788887431 344 566666 455 7999
Q ss_pred EeccCCCcceeEee
Q psy17688 256 LDVRVPCTPVARLN 269 (349)
Q Consensus 256 ~d~~~~~~~~~~~~ 269 (349)
||.....+.+..+.
T Consensus 259 ydr~~~~~~vg~f~ 272 (355)
T 3amr_A 259 YDRQGKNKYVADFR 272 (355)
T ss_dssp EESSTTCCEEEEEE
T ss_pred EECCCCCcEEEEEE
Confidence 99974355555553
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.89 E-value=0.13 Score=41.70 Aligned_cols=232 Identities=12% Similarity=0.136 Sum_probs=106.9
Q ss_pred CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C------cEEEEECCC
Q psy17688 36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D------YLRVWRAGE 108 (349)
Q Consensus 36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~------~i~vw~~~~ 108 (349)
+. .++.|+.....-..+.+|++... .............-.++... ++. +++.|+ + .+.+||..+
T Consensus 16 ~~-i~v~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~-~~~-----lyv~GG~~~~~~~~~~~~~d~~~ 86 (302)
T 2xn4_A 16 KL-MVVVGGQAPKAIRSVECYDFKEE--RWHQVAELPSRRCRAGMVYM-AGL-----VFAVGGFNGSLRVRTVDSYDPVK 86 (302)
T ss_dssp EE-EEEECCBSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE-TTE-----EEEESCBCSSSBCCCEEEEETTT
T ss_pred CE-EEEECCCCCCCCCcEEEEcCcCC--cEeEcccCCcccccceEEEE-CCE-----EEEEeCcCCCccccceEEECCCC
Confidence 44 36667653222345677766433 32222111111111222222 444 666665 1 588888877
Q ss_pred CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-----eEEEEeccCcceeeeecccCCceeeeeeccCCce
Q psy17688 109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-----TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV 183 (349)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v 183 (349)
........+. . .. .......+ ++.+++.|+.++ .+.+||+.+.+-... ..+..... -
T Consensus 87 ~~W~~~~~~p--~-~r--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~ 148 (302)
T 2xn4_A 87 DQWTSVANMR--D-RR--STLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV---------APMNTRRS-S 148 (302)
T ss_dssp TEEEEECCCS--S-CC--BSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE---------CCCSSCCB-S
T ss_pred CceeeCCCCC--c-cc--cceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCeEeec---------CCCCCccc-C
Confidence 6422211111 1 00 11112222 567788887653 477888877654311 01111111 1
Q ss_pred eeEEEecCCCCccEEEEEcCC-------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cE
Q psy17688 184 YDIAFSRAGGGRDMFASVGAE-------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CE 252 (349)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~ 252 (349)
.+++. -++ .+++.|+.+ ..+.+||+.+.+-..... ......-.+++.. ++.+++.|+.++ ..
T Consensus 149 ~~~~~-~~~---~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 221 (302)
T 2xn4_A 149 VGVGV-VGG---LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS 221 (302)
T ss_dssp CEEEE-ETT---EEEEECCEETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC
T ss_pred ceEEE-ECC---EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEEE--CCEEEEECCCCCCcccce
Confidence 12222 244 677777643 458899998765332211 1111112233332 567777777543 14
Q ss_pred EEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEeec
Q psy17688 253 VIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDIQQ 304 (349)
Q Consensus 253 i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~~~ 304 (349)
+.+||+.+.. ..+..+.........+ ..+++. ++.|+.++ .+.+||+.+
T Consensus 222 ~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i-~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 222 VEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLL-YVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEE--EETTEE-EEECCBCSSSBCCCEEEEETTT
T ss_pred EEEEeCCCCCEeeCCCCCCccccCeEE--EECCEE-EEECCcCCCcccccEEEEcCCC
Confidence 8899987511 1111111111111112 224554 77777653 377777765
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.77 E-value=0.19 Score=41.87 Aligned_cols=252 Identities=7% Similarity=0.032 Sum_probs=119.1
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-c--eEecCCCCeeEEEEecC---CCCCCCcEEEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-K--STIDHPYPTTKIMWIPD---RKGVFPDLLAT 96 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~--~~~~~~~~v~~~~~~~~---~~~~~~~~l~~ 96 (349)
.....|+|.| +|++ |.++.. .|.|.+++.+....+... . ...........|+++|+ +.. +.++
T Consensus 18 ~~P~~i~~~p--dG~~-l~V~e~----~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLP--DNHG-MLITLR----GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR----IWLS 86 (353)
T ss_dssp SSEEEEEECS--TTCC-EEEEET----TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE----EEEE
T ss_pred CCcEEEEEcC--CCCE-EEEEeC----CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCE----EEEE
Confidence 4568899998 9973 556655 788888864311111111 0 00112346789999996 332 4444
Q ss_pred eC--------C-cEEEEECCCCCch---hheeccCCC---CCCCcCceeEEEecCCCCCeEEEEEcC-------------
Q psy17688 97 SG--------D-YLRVWRAGEPETR---LECILNNNK---NSDFCAPLTSFDWNEVDPNLLGTSSID------------- 148 (349)
Q Consensus 97 ~~--------~-~i~vw~~~~~~~~---~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~d------------- 148 (349)
-. . .|..|+++..... .+.++.... ...| .-..+.|.| ++.++++-+..
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~ 163 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQ 163 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCT
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECC-CCcEEEEECCCCCCCccCCCCCCC
Confidence 21 2 5666666543211 111222111 1112 124689988 77666654332
Q ss_pred CeEEEEeccCcceeeeeccc---CCceeeee-eccCCceeeEEEec-CCCCccEEEEEcC-CCcEEEEECCCCCc-----
Q psy17688 149 TTCTIWCLETNQVVGRVNSV---SGHVKTQL-IAHDKEVYDIAFSR-AGGGRDMFASVGA-EGSVRMFDLRHLEH----- 217 (349)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~---~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~l~~~~~-d~~v~iwd~~~~~~----- 217 (349)
|.|.-++....-.. -++. .+.....+ .++ .....++|+| .+ .++++-.. ++.=.|.-+..+..
T Consensus 164 g~I~ri~~dG~~p~--~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g---~l~~~d~g~~~~dei~~i~~G~nyGwp~ 237 (353)
T 2g8s_A 164 GKLVRLTDQGEIPD--DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSN---ALWLNEHGPRGGDEINIPQKGKNYGWPL 237 (353)
T ss_dssp TEEEEEETTSCCCT--TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTT---EEEEEEECSBSCEEEECCCTTCBCCTTT
T ss_pred eEEEEECCCCCCCC--CCCCcCCCCCCccEEEEcC-cCccceEEECCCC---CEEEEecCCCCCcEEeEeccCCcCCCCC
Confidence 45655565422000 0000 00001122 233 3578999999 55 44444221 21112222221110
Q ss_pred -----------------------eeeeeeCCCCCceeEEEEeCC------CCCeEEEEeeCCcEEEEEeccCCCcceeE-
Q psy17688 218 -----------------------STIIYEDPQHTPLLRLAWNKQ------DPNYLAMVAMNACEVIILDVRVPCTPVAR- 267 (349)
Q Consensus 218 -----------------------~~~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~d~~~i~v~d~~~~~~~~~~- 267 (349)
........+...+..++|.+. .+.++++.-..+ .|...++.. +.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~-~v~~~~~~~-~~~~~~~ 315 (353)
T 2g8s_A 238 ATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDK-DVIVMSVNG-DKVTEDG 315 (353)
T ss_dssp BCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTT-EEEEEEEET-TEEEEEE
T ss_pred ccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCC-EEEEEEeCC-CeEeeeE
Confidence 000000011234566777641 355555554555 588888774 433322
Q ss_pred -e-ecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688 268 -L-NNHRACVNGIAWAPHSSCHICTAGDDHQ 296 (349)
Q Consensus 268 -~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~ 296 (349)
+ ......+..+++.|+|..++++-..+|.
T Consensus 316 ~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 316 RILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp EESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred EcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 2 1223578999999999852333323443
No 317
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.71 E-value=0.4 Score=47.09 Aligned_cols=235 Identities=9% Similarity=0.110 Sum_probs=132.3
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchh
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRL 113 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~ 113 (349)
..+ .||.-. ...++|++++... ++. ......+|.-=+|-... .|+--. ..|.-|++.... .+
T Consensus 76 ~~~-iiALra-----g~~lQiFnl~~k~-klk---s~~~~e~VvfWkWis~~------~l~lVT~~aVyHW~~~~~s-~P 138 (1630)
T 1xi4_A 76 ASK-VIALKA-----GKTLQIFNIEMKS-KMK---AHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEGES-QP 138 (1630)
T ss_pred Ccc-eEEEec-----CCeEEEeehHHhh-hhc---ccccCCCceEEEecCCC------eeEEEcCCeEEEeccCCCC-cc
Confidence 445 366542 5789999996442 122 22344577777887776 455555 499999997533 23
Q ss_pred heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE
Q psy17688 114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI 186 (349)
Q Consensus 114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (349)
...+..|..-. ...|....-++ +.+.++..+ -.|.+.+|..+.+.. +.+.+|......+
T Consensus 139 ~k~fdR~~~L~-~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s------------Q~iegha~~F~~~ 204 (1630)
T 1xi4_A 139 VKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQF 204 (1630)
T ss_pred HHHHhcchhcc-cCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccccc------------hhhhHhHhhhhee
Confidence 33344333221 24566666665 555554332 347888998876554 3456776655444
Q ss_pred EEecCCCCccEEEEEcC---CCcEEEEECCCC-C-------ceeeeeeCC--CCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688 187 AFSRAGGGRDMFASVGA---EGSVRMFDLRHL-E-------HSTIIYEDP--QHTPLLRLAWNKQDPNYLAMVAMNACEV 253 (349)
Q Consensus 187 ~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~-~-------~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~i 253 (349)
...-......+++.+.. .+.++|.++... . ...-+...+ ...-..++..++ .-..++.-+.-| .+
T Consensus 205 ~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G-~~ 282 (1630)
T 1xi4_A 205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG-YI 282 (1630)
T ss_pred ccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCc-eE
Confidence 44211111134433322 378999998653 1 001111111 122345677777 677888888889 79
Q ss_pred EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
++||+.+ +.++..-+-...+|-..+-+....- ++.....|.|.--.+..
T Consensus 283 ~~~d~~t-~~~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 283 HLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EEEeccc-chhhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEcc
Confidence 9999998 7666555444455544444443344 44455667665555544
No 318
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.56 E-value=0.64 Score=45.34 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=85.7
Q ss_pred cEEEEEc----------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce
Q psy17688 196 DMFASVG----------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV 265 (349)
Q Consensus 196 ~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~ 265 (349)
.+++.|. ..|.|++|++... ....+.....++++++++-- ++ +|++|-. . .+++|++.. .+.+
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~--~g-~Lla~ig-~-~l~vy~l~~-~~~L 917 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF--NG-KLLASIN-S-TVRLYEWTT-EKEL 917 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE--TT-EEEEEET-T-EEEEEEECT-TSCE
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee--CC-EEEEEcC-C-EEEEEECCC-CceE
Confidence 5777775 3578999999743 44444444566788888754 45 4444443 4 599999986 3333
Q ss_pred eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe--ccCCceEEEEEcCCCCceEEEEcCCe
Q psy17688 266 ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT--AAGGEINQIQWGATQPDWIAICYNKY 343 (349)
Q Consensus 266 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 343 (349)
..-..+-..|..+.....+.+ ++.|..-..|.+...+..+ ..+..+. .+...++++.+-.++ .++.+..+|.
T Consensus 918 ~~~~~~~~~i~~~~l~~~~~~-I~vgD~~~Sv~~~~y~~~~----~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gN 991 (1158)
T 3ei3_A 918 RTECNHYNNIMALYLKTKGDF-ILVGDLMRSVLLLAYKPME----GNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFN 991 (1158)
T ss_dssp EEEEEECCCSCEEEEEEETTE-EEEEESSBCEEEEEEETTT----TEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSE
T ss_pred EEEeeccccEEEEEEeccCCE-EEEEEhhheEEEEEEEcCC----CeEEEEEeecccccEEEEEEEccC-cEEEEcCCCc
Confidence 311111112333334345676 8888888888887766532 1233332 235578888887655 5777777899
Q ss_pred EEEee
Q psy17688 344 LEVLR 348 (349)
Q Consensus 344 v~vw~ 348 (349)
+.+++
T Consensus 992 l~vl~ 996 (1158)
T 3ei3_A 992 LFVCQ 996 (1158)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88875
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.56 E-value=0.24 Score=40.35 Aligned_cols=185 Identities=11% Similarity=0.078 Sum_probs=89.0
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----C-------CeEEEEeccCcce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----D-------TTCTIWCLETNQV 161 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~ 161 (349)
+++.|++.+.+||..+.+... ..+.... ...-.++.. .++.+++.|+. + ..+..||+.+.+-
T Consensus 7 l~~~GG~~~~~yd~~~~~W~~-~~~~~p~----~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISEEGAVAYDPAANECYC-ASLSSQV----PKNHVSLVT--KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEETTEEEEEETTTTEEEE-EECCCCS----CSSEEEEEC--TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcCCceEEECCCCCeEec-CCCCCCC----CccceEEEE--ECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 556666789999998875432 1111110 011122222 36778888874 1 1267788877654
Q ss_pred eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--------CcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688 162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--------GSVRMFDLRHLEHSTIIYEDPQHTPLLRL 233 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 233 (349)
.. +. .+..... -.+++.. ++ .+++.|+.+ ..+.+||+.+.+-..... .+....-.++
T Consensus 80 ~~-~~--------~~p~~r~-~~~~~~~-~~---~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~ 144 (315)
T 4asc_A 80 LG-MP--------PLPSPRC-LFGLGEA-LN---SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYVVYGHTV 144 (315)
T ss_dssp EE-CC--------CBSSCEE-SCEEEEE-TT---EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSCCBSCEE
T ss_pred EE-CC--------CCCcchh-ceeEEEE-CC---EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCcccceeE
Confidence 31 10 0110000 0112222 44 677777732 458899998764322211 1111112223
Q ss_pred EEeCCCCCeEEEEee-CC----cEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEe
Q psy17688 234 AWNKQDPNYLAMVAM-NA----CEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDI 302 (349)
Q Consensus 234 ~~~~~~~~~l~~~~~-d~----~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~ 302 (349)
+.. ++.+++.|+. ++ ..+.+||..+.. ..+..+......-..+. -+++. ++.|+.++ .+.+||+
T Consensus 145 ~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i-yv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 145 LSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRI-IVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp EEE--TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEE-EEEEEECSSSEEEEEEEEET
T ss_pred EEE--CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEE-EEEeccCCCCccceEEEEEC
Confidence 332 5677777776 21 148899987521 11111111111112222 24554 77776654 4777777
Q ss_pred ec
Q psy17688 303 QQ 304 (349)
Q Consensus 303 ~~ 304 (349)
.+
T Consensus 220 ~~ 221 (315)
T 4asc_A 220 TD 221 (315)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.40 E-value=0.29 Score=39.50 Aligned_cols=147 Identities=11% Similarity=0.039 Sum_probs=74.1
Q ss_pred CCCeEEEEEcC-----CeEEEEeccCcc---eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----
Q psy17688 138 DPNLLGTSSID-----TTCTIWCLETNQ---VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----- 204 (349)
Q Consensus 138 ~~~~l~~~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----- 204 (349)
++.+++.|+.+ ..+.+||+.+.+ -.. + ..+...... .+++. .++ .+++.|+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~-~--------~~~p~~r~~-~~~~~-~~~---~lyv~GG~~~~~~~ 127 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYS-V--------APMNVRRGL-AGATT-LGD---MIYVSGGFDGSRRH 127 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEE-E--------CCCSSCCBS-CEEEE-ETT---EEEEECCBCSSCBC
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEE-C--------CCCCCCccc-eeEEE-ECC---EEEEEcccCCCccc
Confidence 56778888765 468899988776 321 0 111111111 11222 245 677777644
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCC-cceeEeecCCcceEEEE
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPC-TPVARLNNHRACVNGIA 279 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~ 279 (349)
..+.+||+.+.+-...... .....-.+++.. ++.+++.|+.++ ..+.+||+.+.. ..+..+.........+.
T Consensus 128 ~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDM-QTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp CEEEEEETTTTEEEEEEEC-SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ceEEEEcCCCCeEEECCCC-CCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence 3688999987653332221 121222223322 567777776542 148899987511 11111111111112222
Q ss_pred EeeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688 280 WAPHSSCHICTAGDD-----HQALIWDIQQ 304 (349)
Q Consensus 280 ~~p~~~~~l~~~~~d-----~~v~iwd~~~ 304 (349)
-++.. ++.|+.+ ..+.+||+.+
T Consensus 205 --~~~~i-~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 205 --LNDHI-YVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp --ETTEE-EEECCBCSSSBCCCEEEEETTT
T ss_pred --ECCEE-EEEeCCCCCcccceEEEEeCCC
Confidence 24444 7777764 4588888876
No 321
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.32 E-value=0.37 Score=40.03 Aligned_cols=244 Identities=16% Similarity=0.116 Sum_probs=117.6
Q ss_pred CeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCC-CCCCCcCceeEEEecCC---CCCeEEEEEc---
Q psy17688 76 PTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNN-KNSDFCAPLTSFDWNEV---DPNLLGTSSI--- 147 (349)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~l~~~~~--- 147 (349)
....|+|.|+++. ++++-.. .|++++.+... . ....... ....-......++|+|. ++.++++-+.
T Consensus 19 ~P~~i~~~pdG~~----l~V~e~~G~i~~~~~~g~~-~-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 19 HPWALAFLPDNHG----MLITLRGGELRHWQAGKGL-S-APLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SEEEEEECSTTCC----EEEEETTTEEEEEETTTEE-C-CCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CcEEEEEcCCCCE----EEEEeCCceEEEEeCCCce-e-eEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 5689999999963 4444444 88888743211 0 0011000 00011235678999873 3444444332
Q ss_pred ----CCeEEEEeccCcc-eeeeecccCCceeeeee---ccCCceeeEEEecCCCCccEEEEEcC-------------CCc
Q psy17688 148 ----DTTCTIWCLETNQ-VVGRVNSVSGHVKTQLI---AHDKEVYDIAFSRAGGGRDMFASVGA-------------EGS 206 (349)
Q Consensus 148 ----dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~ 206 (349)
...|..+++.... .+... ......+. ........++|.|++ .++++.+. .|.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~----~~i~~~~p~~~~~~h~~~~l~~~pdG---~Lyv~~Gd~~~~~~~q~~~~~~g~ 165 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDF----RTVFRQMPKLSTGNHFGGRLVFDGKG---YLFIALGENNQRPTAQDLDKLQGK 165 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEE----EEEEECSSCCBSSSCCCCCEEECSSS---EEEEEECCTTCGGGGGCTTSCTTE
T ss_pred CCCceeEEEEEEECCCCCCCCce----EEEEEECCCCCCCcccCccEEECCCC---cEEEEECCCCCCCccCCCCCCCeE
Confidence 2356666654321 01000 00001111 001124679999998 66666543 246
Q ss_pred EEEEECCCCCc-----------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--c-EEEEEeccC------------
Q psy17688 207 VRMFDLRHLEH-----------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--C-EVIILDVRV------------ 260 (349)
Q Consensus 207 v~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~-~i~v~d~~~------------ 260 (349)
|.-+|....-. ...+... .......++|+|.++. |.++.... . .|.+.....
T Consensus 166 I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~ 243 (353)
T 2g8s_A 166 LVRLTDQGEIPDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGIN 243 (353)
T ss_dssp EEEEETTSCCCTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBC
T ss_pred EEEECCCCCCCCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCC
Confidence 77777654200 0111111 2245788999994444 44433321 0 232211000
Q ss_pred ----------------CCcceeEeecCCcceEEEEEee-------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-
Q psy17688 261 ----------------PCTPVARLNNHRACVNGIAWAP-------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY- 316 (349)
Q Consensus 261 ----------------~~~~~~~~~~~~~~v~~~~~~p-------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~- 316 (349)
...++..+..| .....+.|.. ++.+ +++.-..+.|...++..... . ....+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l-~v~~~~~~~v~~~~~~~~~~-~--~~~~~~ 318 (353)
T 2g8s_A 244 YSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKL-FIGALKDKDVIVMSVNGDKV-T--EDGRIL 318 (353)
T ss_dssp TTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEE-EEEETTTTEEEEEEEETTEE-E--EEEEES
T ss_pred CCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcE-EEEEccCCEEEEEEeCCCeE-e--eeEEcc
Confidence 00122223322 3567888874 3544 66655677788888774211 0 01112
Q ss_pred eccCCceEEEEEcCCCCceEEEEc
Q psy17688 317 TAAGGEINQIQWGATQPDWIAICY 340 (349)
Q Consensus 317 ~~~~~~v~~~~~~~~~~~l~~~~~ 340 (349)
......+.++++.|+|. |..++.
T Consensus 319 ~~~~~rp~~v~~~pdG~-lyv~td 341 (353)
T 2g8s_A 319 TDRGQRIRDVRTGPDGY-LYVLTD 341 (353)
T ss_dssp GGGCCCEEEEEECTTSC-EEEEEC
T ss_pred cCCCCceeEEEECCCCc-EEEEEe
Confidence 22245789999999998 444433
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.32 E-value=0.46 Score=41.05 Aligned_cols=108 Identities=8% Similarity=0.098 Sum_probs=61.7
Q ss_pred CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCC--CCCeEEEEee---
Q psy17688 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQ--DPNYLAMVAM--- 248 (349)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~--~~~~l~~~~~--- 248 (349)
-.....++|.|++ +++++-...+.|++++..+++........ .....+..|+|+|+ ....|++...
T Consensus 26 l~~P~~~a~~pdG---~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 26 LNKPHALLWGPDN---QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CSSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCceEEEEcCCC---cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 3457899999999 67776655557888887654432221111 12456779999993 0455554442
Q ss_pred ----------CCcEEEEEeccCCC------cceeE-ee-cCCcceEEEEEeeCCCCEEEEE
Q psy17688 249 ----------NACEVIILDVRVPC------TPVAR-LN-NHRACVNGIAWAPHSSCHICTA 291 (349)
Q Consensus 249 ----------d~~~i~v~d~~~~~------~~~~~-~~-~~~~~v~~~~~~p~~~~~l~~~ 291 (349)
.. .|.-++..... +.+.. +. ........|.|.|+|.+++.+|
T Consensus 103 ~~~~~~~~~~~~-~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQT-IIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEE-EEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCcccccccc-EEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 12 36666554211 11111 21 1123568999999998644444
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.27 E-value=0.35 Score=39.21 Aligned_cols=106 Identities=11% Similarity=0.024 Sum_probs=55.4
Q ss_pred CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcE
Q psy17688 138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSV 207 (349)
Q Consensus 138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v 207 (349)
++.+++.|+.+ ..+.+||+.+.+-... ..+...... .+++.. ++ .+++.|+.+ ..+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---------~~~p~~r~~-~~~~~~-~~---~iyv~GG~~~~~~~~~~ 186 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV---------APMLTRRIG-VGVAVL-NR---LLYAVGGFDGTNRLNSA 186 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEEC---------CCCSSCCBS-CEEEEE-TT---EEEEECCBCSSCBCCCE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeEC---------CCCCccccc-eEEEEE-CC---EEEEEeCCCCCCcCceE
Confidence 56777777644 3578888877654311 011111111 112222 44 677777654 468
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccC
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRV 260 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~ 260 (349)
.+||+.+.+-..... ......-.+++.. ++.+++.|+.++ ..+.+||+.+
T Consensus 187 ~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 187 ECYYPERNEWRMITA-MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEEeCCCCeEeeCCC-CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC
Confidence 899998764322211 1111112223332 567777776542 1489999875
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.27 E-value=0.35 Score=39.13 Aligned_cols=183 Identities=9% Similarity=-0.003 Sum_probs=89.3
Q ss_pred EEEEeC-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeee
Q psy17688 93 LLATSG-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGR 164 (349)
Q Consensus 93 ~l~~~~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~ 164 (349)
+++.|+ + .+.+||..+........+.. .. .....+. .++.+++.|+.+ ..+.+||+.+.+-...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~---~r--~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFE---KR--RDAACVF---WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSC---CC--BSCEEEE---ETTEEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCc---cc--ceeEEEE---ECCEEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 555554 2 88999988765322111111 00 1112222 256778888755 5788889887754311
Q ss_pred ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC
Q psy17688 165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ 238 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 238 (349)
..+...... .+++ .-++ .+++.|+.+ ..+.+||+.+.+-...- .......-.+++..
T Consensus 86 ---------~~~p~~r~~-~~~~-~~~~---~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~-- 148 (306)
T 3ii7_A 86 ---------LGPPTPRDS-LAAC-AAEG---KIYTSGGSEVGNSALYLFECYDTRTESWHTKP-SMLTQRCSHGMVEA-- 148 (306)
T ss_dssp ---------ECCSSCCBS-CEEE-EETT---EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--
T ss_pred ---------CCCCccccc-eeEE-EECC---EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-CCcCCcceeEEEEE--
Confidence 011111111 1122 2245 677777755 46899999886532221 11111122223332
Q ss_pred CCCeEEEEeeC---------CcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCC-----CcEEEEEee
Q psy17688 239 DPNYLAMVAMN---------ACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDD-----HQALIWDIQ 303 (349)
Q Consensus 239 ~~~~l~~~~~d---------~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----~~v~iwd~~ 303 (349)
++.+++.|+.+ . .+.+||+.+.. ..+..+......-..+.+ +++. ++.|+.+ ..+.+||+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~-~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i-~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLN-SCEVYDPATETWTELCPMIEARKNHGLVFV--KDKI-FAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp TTEEEEECCEESCTTTCEECC-CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEE-EEECCEETTEEBCCEEEEETT
T ss_pred CCEEEEECCCCCCCCcccccc-eEEEeCCCCCeEEECCCccchhhcceEEEE--CCEE-EEEeCCCCCCCCceEEEeeCC
Confidence 56677777642 3 48899987521 111111111111122222 4554 7777654 357888876
Q ss_pred c
Q psy17688 304 Q 304 (349)
Q Consensus 304 ~ 304 (349)
+
T Consensus 225 ~ 225 (306)
T 3ii7_A 225 L 225 (306)
T ss_dssp T
T ss_pred C
Confidence 6
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.26 E-value=0.26 Score=37.60 Aligned_cols=149 Identities=5% Similarity=-0.044 Sum_probs=79.7
Q ss_pred CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce------eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI 254 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~ 254 (349)
..+.+++|+|++ .+.+. .+|.++-.+..+.... ..+-. ..-.....+.|.| ++.+.++ .|| .|+
T Consensus 41 ~~~~~laf~P~G---~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~-~Gw~~F~a~~fD~-~G~LYav--~dG-~iy 110 (236)
T 1tl2_A 41 SNFKFLFLSPGG---ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN-GGWNQFQFLFFDP-NGYLYAV--SKD-KLY 110 (236)
T ss_dssp TTCSEEEECTTS---CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC-SCGGGCSEEEECT-TSCEEEE--ETT-EEE
T ss_pred ccceeEEECCCc---cEEEE--eCCeEEEECCCCCCcccccccccEecc-cccccceEEEECC-CCCEEEe--CCC-EEE
Confidence 367899999988 55555 7777776666542211 11111 0111247899999 8888877 568 588
Q ss_pred EEeccCCCcce-----eEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC-cEEEEe-ccCCceEEE
Q psy17688 255 ILDVRVPCTPV-----ARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED-PILAYT-AAGGEINQI 326 (349)
Q Consensus 255 v~d~~~~~~~~-----~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~-~~~~~v~~~ 326 (349)
-++-.+.+..- ..+ ..-=..+..|.+.|+|.. .+.. |+.++-............ ....+. ..-..-+.+
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~L-yav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l 187 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYL-YAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL 187 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCE-EEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceE-EEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence 77754322111 111 111246899999999984 4444 777443221111100000 011111 222344567
Q ss_pred EEcCCCCceEEEEcCCeE
Q psy17688 327 QWGATQPDWIAICYNKYL 344 (349)
Q Consensus 327 ~~~~~~~~l~~~~~d~~v 344 (349)
.|.+++. |.++. ++.+
T Consensus 188 ~f~~~G~-l~~v~-~g~~ 203 (236)
T 1tl2_A 188 FFSSVGT-LFGVQ-GGKF 203 (236)
T ss_dssp EECTTSC-EEEEE-TTEE
T ss_pred EECCCCc-EEEEe-CCeE
Confidence 7999986 55555 6644
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.15 E-value=1.2 Score=44.05 Aligned_cols=256 Identities=10% Similarity=0.156 Sum_probs=132.6
Q ss_pred CccccceeeeeecCC-ceeeEEEeec--CCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC
Q psy17688 9 PPTTQKEIYKYEAPW-PLYSMNWSVR--PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD 85 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~-~v~~~~~sp~--~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 85 (349)
.|....++..+..-+ ...++.|... ...+| +.+--. .++...|.|.|+..... . ..... ..-+.--+|.
T Consensus 5 ~pi~~~e~~~L~~lGi~~~~i~f~~~T~eSDky-icvre~-~~~~~~vvIidl~~~~~-~-~rrpi----~AdsAIMnP~ 76 (1630)
T 1xi4_A 5 LPIRFQEHLQLQNLGINPANIGFSTLTMESDKF-ICIREK-VGEQAQVVIIDMNDPSN-P-IRRPI----SADSAIMNPA 76 (1630)
T ss_pred CCeehhhhhhhhhcCCCcccccccceeeecCce-EEEEec-CCCCceEEEEECCCCCC-c-ccccc----cchhhccCCC
Confidence 355555655554432 3334444321 13555 555432 23355888888865422 1 11111 1223346787
Q ss_pred CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688 86 RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR 164 (349)
Q Consensus 86 ~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 164 (349)
.+ ++|.-.+ ++.|||+++.... ..+.- ..+|.-=.|- +.+.|+..+. ..|.-|++.......
T Consensus 77 ~~-----iiALrag~~lQiFnl~~k~kl-----ks~~~---~e~VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~s~P~- 139 (1630)
T 1xi4_A 77 SK-----VIALKAGKTLQIFNIEMKSKM-----KAHTM---TDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPV- 139 (1630)
T ss_pred cc-----eEEEecCCeEEEeehHHhhhh-----ccccc---CCCceEEEec--CCCeeEEEcC-CeEEEeccCCCCccH-
Confidence 77 8888776 9999999875422 22221 1456555663 5556665554 589999997532221
Q ss_pred ecccCCceeeeeecc----CCceeeEEEecCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688 165 VNSVSGHVKTQLIAH----DKEVYDIAFSRAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL 233 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 233 (349)
+.+..| ...|..-..+++. ++++..+ ..|.+.+|..+..... .+. +|......+
T Consensus 140 ---------k~fdR~~~L~~~QIinY~~d~~~---kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~ie--gha~~F~~~ 204 (1630)
T 1xi4_A 140 ---------KMFDRHSSLAGCQIINYRTDAKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIE--GHAASFAQF 204 (1630)
T ss_pred ---------HHHhcchhcccCeeEEeeeCCCC---CeEEEEeeccCCCcccceeeeeecccccch-hhh--HhHhhhhee
Confidence 222222 2446666777777 5665443 3478889988764321 110 111111111
Q ss_pred EEe--CCCCCeEEEEee---CCcEEEEEeccCC--CcceeE------eec---CCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688 234 AWN--KQDPNYLAMVAM---NACEVIILDVRVP--CTPVAR------LNN---HRACVNGIAWAPHSSCHICTAGDDHQA 297 (349)
Q Consensus 234 ~~~--~~~~~~l~~~~~---d~~~i~v~d~~~~--~~~~~~------~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~v 297 (349)
... +....+++.+.. .+ .++|.++..+ +.+... +.. ..+-...+..++.... +..-+.-|.+
T Consensus 205 ~~~~~~~~~~l~~f~~~~~~g~-kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~-iy~itk~G~~ 282 (1630)
T 1xi4_A 205 KMEGNAEESTLFCFAVRGQAGG-KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKYGYI 282 (1630)
T ss_pred ccCCCCCCceEEEEEEecCCCc-eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE-EEEEecCceE
Confidence 111 101122222221 14 5999888542 111111 111 1223345666766665 7777889999
Q ss_pred EEEEeecCC
Q psy17688 298 LIWDIQQMP 306 (349)
Q Consensus 298 ~iwd~~~~~ 306 (349)
.+||+.++.
T Consensus 283 ~~~d~~t~~ 291 (1630)
T 1xi4_A 283 HLYDLETGT 291 (1630)
T ss_pred EEEecccch
Confidence 999999954
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.14 E-value=0.19 Score=38.32 Aligned_cols=154 Identities=6% Similarity=0.020 Sum_probs=82.1
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee--ccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRAGGGRDMFASVGAEG 205 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d~ 205 (349)
.+..++|+| ++.+.++ .+|.+.-.+..+.....=+ +. ...+- +-.. ..++.|.|++ .+.++ .||
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~----~s-~t~IG~~Gw~~-F~a~~fD~~G---~LYav--~dG 107 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWM----GR-AKKIGNGGWNQ-FQFLFFDPNG---YLYAV--SKD 107 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHH----HH-CEEEECSCGGG-CSEEEECTTS---CEEEE--ETT
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCccccc----cc-ccEeccccccc-ceEEEECCCC---CEEEe--CCC
Confidence 677999998 8887777 6787766665442221000 00 01110 1111 4788999998 55555 569
Q ss_pred cEEEEECCCCCceee-----eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc-----ceeEee-cCCcc
Q psy17688 206 SVRMFDLRHLEHSTI-----IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT-----PVARLN-NHRAC 274 (349)
Q Consensus 206 ~v~iwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~-----~~~~~~-~~~~~ 274 (349)
.|+-++.-+...... ......=..+..|.+.| ++.+.++. |+ .++-........ ....+. ..-..
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg-~lyr~~~P~~~~~~wl~~~~~~g~~g~~~ 183 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQ-QFYKALPPVSNQDNWLARATKIGQGGWDT 183 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TT-EEEEECCCSSTTCCHHHHCEEEESSSGGG
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CC-cEEecCCCCCCCcccccccceeccCCcce
Confidence 888887643221111 11111225679999999 88888877 77 343322211010 111111 22234
Q ss_pred eEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
.+.+.|.|++.. .++. ++ ++|....
T Consensus 184 yr~l~f~~~G~l-~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 184 FKFLFFSSVGTL-FGVQ--GG--KFYEDYP 208 (236)
T ss_dssp EEEEEECTTSCE-EEEE--TT--EEEEESC
T ss_pred EEEEEECCCCcE-EEEe--CC--eEEecCC
Confidence 455778888875 4443 66 4554443
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.12 E-value=0.43 Score=38.79 Aligned_cols=106 Identities=7% Similarity=0.010 Sum_probs=55.9
Q ss_pred CCCeEEEEEcC--------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C----
Q psy17688 138 DPNLLGTSSID--------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E---- 204 (349)
Q Consensus 138 ~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d---- 204 (349)
++.+++.|+.+ ..+.+||+.+.+-.. + ..+..... -.+++ ..++ .+++.|+. +
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~--------~~~p~~r~-~~~~~-~~~~---~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE-S--------DPLPYVVY-GHTVL-SHMD---LVYVIGGKGSDRKC 163 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE-C--------CCCSSCCB-SCEEE-EETT---EEEEECCBCTTSCB
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE-C--------CCCCCccc-ceeEE-EECC---EEEEEeCCCCCCcc
Confidence 56677777742 458888988765431 1 01111111 11122 2344 67777775 2
Q ss_pred -CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688 205 -GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIILDVRV 260 (349)
Q Consensus 205 -~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~d~~~ 260 (349)
..+.+||+.+.+-..... ......-.+++.. ++.+++.|+.++. .+.+||+.+
T Consensus 164 ~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAP-MQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred cceEEEEeCCCCeEEECCC-CCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 468999998764322211 1111112223332 5678888876542 478888875
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.00 E-value=0.62 Score=39.60 Aligned_cols=287 Identities=10% Similarity=0.138 Sum_probs=155.6
Q ss_pred CccccceeeeeecCC-cee-----eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEE
Q psy17688 9 PPTTQKEIYKYEAPW-PLY-----SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW 82 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~-~v~-----~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (349)
.|....++..+..-+ ... ++.+. ..+| +.+--. .+....|.|.|+..... . ..... ..-+.--
T Consensus 5 ~PI~~~e~~~L~~lGi~~~~i~f~~~TmE---SDky-icVrE~-~~~~~~vvIiDl~~~~~-~-~rrpi----~AdsAIM 73 (494)
T 1bpo_A 5 LPIRFQEHLQLQNLGINPANIGFSTLTME---SDKF-ICIREK-VGEQAQVVIIDMNDPSN-P-IRRPI----SADSAIM 73 (494)
T ss_dssp CCEEEEEEEEGGGGTCCTTSCSTTTEEEE---ETTE-EEEEEC-CTTCCEEEEEETTSTTS-C-EEEEC----CCSEEEE
T ss_pred CCceeEeeechhhcCCCccccccceeeee---cCce-EEEEec-CCCCCeEEEEECCCCCc-c-eeccc----ccceeee
Confidence 456666666655431 112 22222 3565 665432 23355889998865422 2 22222 2234457
Q ss_pred ecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce
Q psy17688 83 IPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV 161 (349)
Q Consensus 83 ~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 161 (349)
+|..+ ++|--.+ .+.|||+++........+. .+|.-=.|- +.+.|+..+. ..|.-|++.....
T Consensus 74 nP~~~-----iiALrag~~lQiFnle~K~klks~~~~--------e~VvfWkWi--s~~~l~lVT~-taVyHWsi~~~s~ 137 (494)
T 1bpo_A 74 NPASK-----VIALKAGKTLQIFNIEMKSKMKAHTMT--------DDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQ 137 (494)
T ss_dssp CSSSS-----CEEEEETTEEEEEETTTTEEEEEEECS--------SCCCEEEEE--ETTEEEEECS-SEEEEEESSSSCC
T ss_pred CCCCc-----EEEEecCCeEEEEchHHhhhhcceecC--------CCceEEEec--CCCeEEEEcC-CeeEEecccCCCC
Confidence 88877 7877666 9999999986422222211 355555663 4566666554 5899999975332
Q ss_pred eeeecccCCceeeeeeccC----CceeeEEEecCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688 162 VGRVNSVSGHVKTQLIAHD----KEVYDIAFSRAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHTPL 230 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~v 230 (349)
.. +.+..|. ..|..-..+++. ++++..+ -.|.+.+|..+.... +.+ ..|....
T Consensus 138 P~----------kvFdR~~~L~~~QIInY~~d~~~---kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~i--eGhaa~F 201 (494)
T 1bpo_A 138 PV----------KMFDRHSSLAGCQIINYRTDAKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI--EGHAASF 201 (494)
T ss_dssp CE----------EEEECCGGGTTCEEEEEEECTTS---SEEEEEEEEEETTEEEEEEEEEESTTCCE-EEE--CCSEEEE
T ss_pred ch----------hheecchhcccceEEEEEECCCC---CeEEEEeecccCCcccceEEEeecccccc-chh--eeeeeee
Confidence 21 2333332 346666667777 5665443 247788999886432 222 1222222
Q ss_pred eEEEEeC--CCCCeEEEEeeC---CcEEEEEeccCC--Cccee------Eee---cCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688 231 LRLAWNK--QDPNYLAMVAMN---ACEVIILDVRVP--CTPVA------RLN---NHRACVNGIAWAPHSSCHICTAGDD 294 (349)
Q Consensus 231 ~~~~~~~--~~~~~l~~~~~d---~~~i~v~d~~~~--~~~~~------~~~---~~~~~v~~~~~~p~~~~~l~~~~~d 294 (349)
..+.... ....+++.+... + .++|.++..+ +.+.. .+. ...+-..++..++.... +..-+.-
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~-kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv-iyviTK~ 279 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGG-KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKY 279 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCC-EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE-EEEEETT
T ss_pred EEEecCCCCCCceEEEEEEecCCCc-EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE-EEEEecC
Confidence 2222211 011233333332 4 5999998643 11111 111 11334556777877666 7777889
Q ss_pred CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEE
Q psy17688 295 HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLE 345 (349)
Q Consensus 295 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 345 (349)
|.+++||++++ .++..-+-..+.|..-+-+.....++.....|.|.
T Consensus 280 G~i~lyDleTg-----t~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 280 GYIHLYDLETG-----TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp SEEEEEETTTC-----CEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred ceEEEEecccc-----eeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 99999999994 34444444455666555555544566666666553
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.84 E-value=1.2 Score=41.43 Aligned_cols=266 Identities=8% Similarity=0.042 Sum_probs=138.6
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLR 102 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~ 102 (349)
..|+++.-.. +|. |=.|+. +| +..|+- ................|.++.-..++. +.+...+-+.
T Consensus 22 n~V~~I~qD~--~G~--lWigT~----~G-L~ryDG--~~~~~~~~~~~~~~~~i~~i~~d~~g~-----lWigT~~Gl~ 85 (758)
T 3ott_A 22 SVVSCFLQDS--EGL--IWIGSN----KG-LFSYDG--YSTQQHFTYGENNNTRIYCGVIIDNTY-----LYMGTDNGIL 85 (758)
T ss_dssp CCEEEEEECT--TSC--EEEEES----SC-EEEECS--SCEEECSCTTSTTSSCEEEEEEETTTE-----EEEEETTEEE
T ss_pred ceEEEEEECC--CCC--EEEEEC----CC-ccccCC--CceEEEEccCCCCCceEEEEEEcCCCc-----EEEEeCCCeE
Confidence 5788888654 675 556665 55 444532 111100000001234688887777663 4333334788
Q ss_pred EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688 103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE 182 (349)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (349)
.||..+..... ... .....|.++... + ..|..++.+ -|..+|..+++... +.. .........
T Consensus 86 ~yd~~~~~f~~-----~~~--~~~~~i~~i~~~--~-g~lWigt~~-Gl~~~~~~~~~~~~-~~~------~~~~l~~~~ 147 (758)
T 3ott_A 86 VYNYRADRYEQ-----PET--DFPTDVRTMALQ--G-DTLWLGALN-GLYTYQLQSRKLTS-FDT------RRNGLPNNT 147 (758)
T ss_dssp EEETTTTEECC-----CSC--CCCSCEEEEEEE--T-TEEEEEETT-EEEEEETTTCCEEE-ECH------HHHCCSCSC
T ss_pred EEeCCCCEEEC-----ccc--CCCceEEEEEec--C-CcEEEEcCC-cceeEeCCCCeEEE-ecc------CCCCcCCCe
Confidence 89987653211 000 112346666532 3 456666665 57788877655431 000 000011235
Q ss_pred eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC---CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688 183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP---QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR 259 (349)
Q Consensus 183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~ 259 (349)
|.++....++ .+.+ ++.+ -|..+|..+.+......... ....|.++...+ ++..|..|+..| +..+|..
T Consensus 148 i~~i~~d~~g---~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~~G--l~~~~~~ 219 (758)
T 3ott_A 148 IYSIIRTKDN---QIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTEGY--LFQYFPS 219 (758)
T ss_dssp EEEEEECTTC---CEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEEEE--EEEEETT
T ss_pred EEEEEEcCCC---CEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEECCC--CeEEcCC
Confidence 7777777666 4444 4444 47788877653221111100 123478888876 566566666544 8889976
Q ss_pred CCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--------cCCceEEEEEcC
Q psy17688 260 VPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--------AGGEINQIQWGA 330 (349)
Q Consensus 260 ~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~ 330 (349)
+ .+ ...+. .....|.++...++|.. ..|+.+ -+.+++..... ...+.. ....|.++.-..
T Consensus 220 ~-~~-~~~~~~l~~~~i~~i~~d~~g~l--WigT~~-Gl~~~~~~~~~------~~~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 220 T-GQ-IKQTEAFHNNSIKSLALDGNGDL--LAGTDN-GLYVYHNDTTP------LQHIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp T-TE-EEEEEEEEEEEEEEEEECTTCCE--EEEETT-EEEEECCTTSC------CEEECCCTTCTTSCSCSCEEEEEECT
T ss_pred C-Ce-EEeccCCCCCeEEEEEEcCCCCE--EEEeCC-ceeEEecCCCc------EEEEEcCCCCcCcCCcCeEEEEEEcC
Confidence 5 32 22221 12345788887777764 444444 47788765421 112211 134688888888
Q ss_pred CCCceEEEEcCC
Q psy17688 331 TQPDWIAICYNK 342 (349)
Q Consensus 331 ~~~~l~~~~~d~ 342 (349)
+|..++. +..|
T Consensus 289 ~g~lWiG-T~~G 299 (758)
T 3ott_A 289 EHNIWLG-TDYG 299 (758)
T ss_dssp TCCEEEE-ESSS
T ss_pred CCCEEEE-eCCc
Confidence 8875444 4444
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.57 E-value=0.82 Score=37.78 Aligned_cols=248 Identities=15% Similarity=0.143 Sum_probs=124.9
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEE--c
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSS--I 147 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~--~ 147 (349)
.....|+|.|++. ++++-. . .|++++...+.......+.. ....-......|+++|. ++.+.++-+ .
T Consensus 32 ~~P~~ia~~pdG~-----llVter~~G~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 32 NSPWGLAPLPGGD-----LLVSSRDEATITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp SSEEEEEECTTSC-----EEEEETTTCEEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CCceEEEEcCCCc-----EEEEEecCCEEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 4678999999998 888876 4 88888755433211111110 00111246788999873 233433322 3
Q ss_pred CCeEEEEeccCccee-eeecccCCceeeee---eccCCceeeEEEecCCCCccEEEEEcC-------------CCcEEEE
Q psy17688 148 DTTCTIWCLETNQVV-GRVNSVSGHVKTQL---IAHDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVRMF 210 (349)
Q Consensus 148 dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~iw 210 (349)
++.|.-|.+...... ..+. ....+...+ ..| ....|.|.|++ .++++.+. .|.|.-.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~-~~~~i~~~~p~~~~H--~g~~l~fgpDG---~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLG-APDTVFRGIPKGVIH--NGGRIAFGPDK---MLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBC-CCEEEEEEECCCSSC--CCCCEEECTTS---CEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred CCEEEEEEeCCCCcccccCC-CcEEEEEcCCCCCCc--cCccccCCCCC---CEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 445666665542100 0000 000001111 123 34679999998 67766542 3555555
Q ss_pred ECCCCCc------eeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-EEEEEeccC---------------CCcceeE
Q psy17688 211 DLRHLEH------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-EVIILDVRV---------------PCTPVAR 267 (349)
Q Consensus 211 d~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-~i~v~d~~~---------------~~~~~~~ 267 (349)
+....-. ...++.. .......++|+| ++.++++=.. ++. .|....-.. ...++..
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~-G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSY-GHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEB-CCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred eCCCCccCCCCCCCCeEEee-CCCCcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence 5543200 0112222 224567899999 7776655432 221 233321110 0123333
Q ss_pred eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688 268 LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC 339 (349)
Q Consensus 268 ~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 339 (349)
+..+......+.|. ++.. +...-..+.|....+..... ..++...+.+..+.+.+++..|+|..+++..
T Consensus 258 ~~~~~~ap~G~~~~-~g~~-~~~~l~~~~l~~v~~~~~~~-~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 258 WSTDEASPSGIAYA-EGSV-WMAGLRGERLWRIPLKGTAA-AADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp ECTTTCCEEEEEEE-TTEE-EEEESTTCSEEEEEEETTEE-SSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cCCCCCCCcceEEE-cCce-eeccccCCEEEEEEecCCce-ecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 43333456778887 3443 55444455666666665321 1222333444357899999999997655554
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.34 E-value=0.87 Score=36.65 Aligned_cols=147 Identities=12% Similarity=0.122 Sum_probs=72.7
Q ss_pred CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----cE
Q psy17688 138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----SV 207 (349)
Q Consensus 138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----~v 207 (349)
++.+++.|+.+ ..+.+||+.+.+-... ..+...... .+++. .++ .+++.|+.++ .+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~~-~~~~~-~~~---~iyv~GG~~~~~~~~~~ 126 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV---------ANMRDRRST-LGAAV-LNG---LLYAVGGFDGSTGLSSV 126 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE---------CCCSSCCBS-CEEEE-ETT---EEEEEEEECSSCEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeC---------CCCCccccc-eEEEE-ECC---EEEEEcCCCCCccCceE
Confidence 56777887755 3578888887654311 011111111 12222 244 6777777553 57
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC------cEEEEEeccCCC-cceeEeecCCcceEEEEE
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA------CEVIILDVRVPC-TPVARLNNHRACVNGIAW 280 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~------~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~ 280 (349)
.+||+.+.+-.... .......-.+++.. ++.+++.|+.++ ..+.+||+.+.. ..+..+.........+.
T Consensus 127 ~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 202 (302)
T 2xn4_A 127 EAYNIKSNEWFHVA-PMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV- 202 (302)
T ss_dssp EEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred EEEeCCCCeEeecC-CCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-
Confidence 88998876533221 11111112223332 567777776432 148889987521 11111111111112222
Q ss_pred eeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688 281 APHSSCHICTAGDD-----HQALIWDIQQ 304 (349)
Q Consensus 281 ~p~~~~~l~~~~~d-----~~v~iwd~~~ 304 (349)
-++.. ++.|+.+ ..+.+||+.+
T Consensus 203 -~~~~i-yv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 203 -LNNLL-YAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp -ETTEE-EEECCBSSSSBCCCEEEEETTT
T ss_pred -ECCEE-EEECCCCCCcccceEEEEeCCC
Confidence 24554 7777764 3588888765
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.34 E-value=1 Score=37.32 Aligned_cols=14 Identities=14% Similarity=-0.142 Sum_probs=10.3
Q ss_pred CeEEEEeccCccee
Q psy17688 149 TTCTIWCLETNQVV 162 (349)
Q Consensus 149 g~i~iwd~~~~~~~ 162 (349)
..+.+||+.+.+-.
T Consensus 168 ~~v~~yd~~~~~W~ 181 (357)
T 2uvk_A 168 KFLLSFDPSTQQWS 181 (357)
T ss_dssp CEEEEEETTTTEEE
T ss_pred ccEEEEeCCCCcEE
Confidence 47888998876554
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.92 E-value=1.7 Score=37.58 Aligned_cols=111 Identities=12% Similarity=0.095 Sum_probs=57.8
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee--ccCCceeeEEEecC---CCCccEEEEEc
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRA---GGGRDMFASVG 202 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~---~~~~~~l~~~~ 202 (349)
....|+|.| ++.++++-...+.|.+++..+++...... ....+. ........|+|+|+ +. .+.++-+
T Consensus 28 ~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~-----~~~~~~~~~g~~Gllgia~~Pdf~~~g--~lYv~~s 99 (454)
T 1cru_A 28 KPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQ-----VPEIVNDADGQNGLLGFAFHPDFKNNP--YIYISGT 99 (454)
T ss_dssp SEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEE-----CTTCCCCTTSSCSEEEEEECTTTTTSC--EEEEEEE
T ss_pred CceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEec-----CCccccccCCCCceeEEEECCCcCcCC--EEEEEEe
Confidence 456899987 77766654433478888765444321000 000010 12345779999995 31 4444433
Q ss_pred C------------CCcEEEEECCCCC----ceeeee---eCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 203 A------------EGSVRMFDLRHLE----HSTIIY---EDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 203 ~------------d~~v~iwd~~~~~----~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
. ...|.-+++.... ....+. ..........|+|.| ++.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 2 2356666654321 111121 111223478999999 777666544
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.85 E-value=1.4 Score=36.43 Aligned_cols=50 Identities=14% Similarity=-0.009 Sum_probs=27.0
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCce-eEEEEeCCCCCeEEEEeeC------CcEEEEEec
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPL-LRLAWNKQDPNYLAMVAMN------ACEVIILDV 258 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d------~~~i~v~d~ 258 (349)
..+.+||+.+.+-..... ....... .+++.. ++.+++.|+.+ . .+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~-~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTD-AVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEE--TTEEEEECCEEETTEECC-CEEEEEC
T ss_pred ccEEEEeCCCCcEEECCC-CCCCCcccccEEEE--CCEEEEEeeecCCCcccC-ceEEEEe
Confidence 578999998865433321 1211111 333333 56677776642 2 3777876
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.63 E-value=1.6 Score=36.06 Aligned_cols=247 Identities=11% Similarity=0.026 Sum_probs=120.5
Q ss_pred CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-----ecCCCCeeEEEEecC---CCCCCCcEE
Q psy17688 23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----IDHPYPTTKIMWIPD---RKGVFPDLL 94 (349)
Q Consensus 23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~---~~~~~~~~l 94 (349)
.....|+|.| ||++ +++-.. .|.|.+++.+ .+....... .........|+++|+ +.. +.
T Consensus 32 ~~P~~ia~~p--dG~l-lVter~----~G~I~~v~~~--~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~----lY 98 (347)
T 3das_A 32 NSPWGLAPLP--GGDL-LVSSRD----EATITRVDAK--TGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM----VY 98 (347)
T ss_dssp SSEEEEEECT--TSCE-EEEETT----TCEEEEECTT--TCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE----EE
T ss_pred CCceEEEEcC--CCcE-EEEEec----CCEEEEEECC--CCcEeeecccCceeecCCCCceeeEeccccccCCE----EE
Confidence 5778999998 9983 554432 6888887543 233221111 123456899999996 221 44
Q ss_pred EEe---CC-cEEEEECCCCCc------hhheeccC-CCCCCCcCceeEEEecCCCCCeEEEEEc-------------CCe
Q psy17688 95 ATS---GD-YLRVWRAGEPET------RLECILNN-NKNSDFCAPLTSFDWNEVDPNLLGTSSI-------------DTT 150 (349)
Q Consensus 95 ~~~---~~-~i~vw~~~~~~~------~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~ 150 (349)
++- .+ .|.-|.+..... ..+.++.. .....| .-..|.|.| ++.++++.+. .|.
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTC
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCC-CCCEEEEECCCCCCccccCCCCCCCE
Confidence 431 23 666666654210 11122211 111222 234688987 8877777543 244
Q ss_pred EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCce-----------
Q psy17688 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHS----------- 218 (349)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~----------- 218 (349)
|.-.+.... .. .-++.... .....+|. ....++|+|++ .++++-. .|+.-.|--++.+..-
T Consensus 176 IlRi~~dG~-ip-~~nPf~~~-~i~a~G~R-Np~Gla~dp~G---~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~ 248 (347)
T 3das_A 176 ILRMTPDGE-PA-PGNPFPGS-PVYSYGHR-NVQGLAWDDKQ---RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGG 248 (347)
T ss_dssp EEEECTTSS-BC-TTCSSTTC-CEEEBCCS-BCCEEEECTTC---CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCC
T ss_pred EEEEeCCCC-cc-CCCCCCCC-eEEeeCCC-CcceEEECCCC---CEEEEecCCCCCceeeEEcCCCEecCCcccCCCCC
Confidence 444443321 00 00000000 01123443 56789999977 5555432 2332222222222110
Q ss_pred -----eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688 219 -----TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPHSSCHICT 290 (349)
Q Consensus 219 -----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 290 (349)
.......+......++|. ++.++...-..+ .|....+...+ ++...+.+..+.+..|...|||..++++
T Consensus 249 ~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~-~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 249 SGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGE-RLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp TTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTC-SEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred ccccCCcEecCCCCCCCcceEEE--cCceeeccccCC-EEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 000001111245567776 355555544455 36666665421 1122233445689999999999874555
Q ss_pred EcCCC
Q psy17688 291 AGDDH 295 (349)
Q Consensus 291 ~~~d~ 295 (349)
...||
T Consensus 326 d~~~g 330 (347)
T 3das_A 326 SNTDG 330 (347)
T ss_dssp CTTSS
T ss_pred cCCCC
Confidence 54554
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.16 E-value=1.9 Score=34.97 Aligned_cols=106 Identities=8% Similarity=0.145 Sum_probs=55.0
Q ss_pred CCCeEEEEEcC-------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC------C
Q psy17688 138 DPNLLGTSSID-------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA------E 204 (349)
Q Consensus 138 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------d 204 (349)
++.+++.|+.+ ..+.+||+.+.+-... ... ......| +++. .++ .+++.|+. -
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~----p~~r~~~-----~~~~-~~~---~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNL----PIKVYGH-----NVIS-HNG---MIYCLGGKTDDKKCT 174 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCC----SSCEESC-----EEEE-ETT---EEEEECCEESSSCBC
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCC----CCccccc-----EEEE-ECC---EEEEEcCCCCCCCcc
Confidence 56777777764 2477888877654311 000 0001112 1222 345 67777764 2
Q ss_pred CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688 205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIILDVRV 260 (349)
Q Consensus 205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~d~~~ 260 (349)
..+.+||+.+.+-.... .......-.+++.. ++.+++.|+.++. .+.+||+.+
T Consensus 175 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp CCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred ceEEEEcCCCCEEEECC-CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC
Confidence 45899999886533221 11111122233333 5677777765431 477888875
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.12 E-value=1.5 Score=35.97 Aligned_cols=116 Identities=7% Similarity=0.041 Sum_probs=68.8
Q ss_pred CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE---ecCCCCccEEEEE-cCCCcEEEEECCC
Q psy17688 139 PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF---SRAGGGRDMFASV-GAEGSVRMFDLRH 214 (349)
Q Consensus 139 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~l~~~-~~d~~v~iwd~~~ 214 (349)
+.+++.++.||.|.-+|..+++...++.... ..++....- ..++ ..++.. +.||.|..+|..+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------~~p~~~~~~~~~~~~~---~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPEN----------FQPLIEIQEPSRLETY---ETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGG----------SCCSEECCCSCTTTSS---EEEEECCSTTTEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCc----------cCCcEEecCCccccCC---cEEEEEECCCCEEEEEECCC
Confidence 4588999999999999999999987553320 011111000 0122 333333 6899999999887
Q ss_pred CCceeeeeeC--CCCCceeEEEEeC--------CCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688 215 LEHSTIIYED--PQHTPLLRLAWNK--------QDPNYLAMVAMNACEVIILDVRVPCTPVARLNN 270 (349)
Q Consensus 215 ~~~~~~~~~~--~~~~~v~~~~~~~--------~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~ 270 (349)
+......... ....++.. .=.| ..+..+++|+.++ .+...|+++ ++.+.++..
T Consensus 77 G~~~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g-~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 77 GLQKLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRT-IMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp EEEEEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEE-EEEEEETTT-CCEEEEEST
T ss_pred CcEEeeeccccceecccccc-CCCceeecccccccCCEEEEEecCC-EEEEEECCC-CcEEEEEec
Confidence 6433222110 01112211 0000 0356788999999 599999998 888887754
No 339
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.95 E-value=3 Score=33.56 Aligned_cols=143 Identities=12% Similarity=0.108 Sum_probs=71.4
Q ss_pred EEEEeC-------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----CeEEEEeccCcc
Q psy17688 93 LLATSG-------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----TTCTIWCLETNQ 160 (349)
Q Consensus 93 ~l~~~~-------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 160 (349)
+++.|+ +.+.+||..+........+.. .. .....+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT---RR--IGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEEEECCCCSS---CC--BSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEEEcCCCCCcccccEEEECCCCCeEeECCCCCc---cc--cceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 666665 168888887764322111111 00 11112222 56777777764 458888987765
Q ss_pred eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCCCceeeeeeCCCCCceeEEEE
Q psy17688 161 VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW 235 (349)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 235 (349)
-... ..+..... -.+++.. ++ .+++.|+.+ ..+.+||+.+.+-.... .......-.+++.
T Consensus 196 W~~~---------~~~p~~r~-~~~~~~~-~~---~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 196 WRMI---------TAMNTIRS-GAGVCVL-HN---CIYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSALGITV 260 (308)
T ss_dssp EEEC---------CCCSSCCB-SCEEEEE-TT---EEEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEE
T ss_pred EeeC---------CCCCCccc-cceEEEE-CC---EEEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCCCccceEEEE
Confidence 4311 01111111 1122222 44 677777754 56899999886433221 1111111222333
Q ss_pred eCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688 236 NKQDPNYLAMVAMNAC----EVIILDVRV 260 (349)
Q Consensus 236 ~~~~~~~l~~~~~d~~----~i~v~d~~~ 260 (349)
. ++.+++.|+.++. .+.+||+.+
T Consensus 261 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 261 H--QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred E--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 2 5677777765431 477787764
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.79 E-value=6 Score=36.62 Aligned_cols=284 Identities=13% Similarity=0.090 Sum_probs=136.0
Q ss_pred eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEE
Q psy17688 25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVW 104 (349)
Q Consensus 25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw 104 (349)
|.++.... ++.. |-+|+. . -+..++. .++++.....+ ....|.++....++. +.+...+-+.++
T Consensus 193 i~~i~~d~--~~~~-lWigt~----~-Gl~~~~~--~~~~~~~~~~l-~~~~i~~i~~d~~g~-----lWigT~~Gl~~~ 256 (758)
T 3ott_A 193 VNSLLEDT--TRQC-VWIGTE----G-YLFQYFP--STGQIKQTEAF-HNNSIKSLALDGNGD-----LLAGTDNGLYVY 256 (758)
T ss_dssp EEEEEEET--TTTE-EEEEEE----E-EEEEEET--TTTEEEEEEEE-EEEEEEEEEECTTCC-----EEEEETTEEEEE
T ss_pred eEEEEEEC--CCCE-EEEEEC----C-CCeEEcC--CCCeEEeccCC-CCCeEEEEEEcCCCC-----EEEEeCCceeEE
Confidence 66666554 4552 455654 3 3555544 33333222111 123578887776765 544443467778
Q ss_pred ECCCCCchhheeccC--CCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688 105 RAGEPETRLECILNN--NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE 182 (349)
Q Consensus 105 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (349)
+..+.... ..... ....-....|.++.-.. ++ .|-.|+..| +.++.............. .-......
T Consensus 257 ~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~D~-~g-~lWiGT~~G-l~~~~~~~~~~~~~~~~~------~~~~~~~~ 325 (758)
T 3ott_A 257 HNDTTPLQ--HIIHDSRNIQSLTNNIIWNIFADQ-EH-NIWLGTDYG-ISLSRYNSALQFIPISQI------TGTGDGNQ 325 (758)
T ss_dssp CCTTSCCE--EECCCTTCTTSCSCSCEEEEEECT-TC-CEEEEESSS-EEEECCCC-CEEEEHHHH------SCSCCCCB
T ss_pred ecCCCcEE--EEEcCCCCcCcCCcCeEEEEEEcC-CC-CEEEEeCCc-ccccccCCceeEEecccC------CCCCCCce
Confidence 77654321 11111 01111224577777653 33 455566666 544432211100000000 00011235
Q ss_pred eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeC------CCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688 183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYED------PQHTPLLRLAWNKQDPNYLAMVAMNACEVII 255 (349)
Q Consensus 183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~------~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v 255 (349)
|.++.-..++ .+. .|+.+| +..++..+++.... .... -....|.++.-.+ ++. |-.|+. ++ +..
T Consensus 326 v~~i~~D~~g---~lW-iGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~-~G-L~~ 396 (758)
T 3ott_A 326 FYSLFRDSKG---FYW-FGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK-EQQ-LWIATD-GS-INR 396 (758)
T ss_dssp EEEEEECTTC---CEE-EEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT-TSC-EEEEET-TE-EEE
T ss_pred EEEEEEcCCC---CEE-EeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECC-CCC-EEEEeC-Cc-Hhh
Confidence 7777777666 444 444554 66676654321111 1110 1124578887776 454 444554 44 999
Q ss_pred EeccCCCcceeEee--c-----CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE---EEEec----cCC
Q psy17688 256 LDVRVPCTPVARLN--N-----HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI---LAYTA----AGG 321 (349)
Q Consensus 256 ~d~~~~~~~~~~~~--~-----~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~~----~~~ 321 (349)
||..+ ++ ...+. . ....|.++...+++. |-.|+..+-+..+|............ ..+.. ...
T Consensus 397 ~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (758)
T 3ott_A 397 YDYAT-RQ-FIHYNIVDNTGTYNTNWTYYIFEDTAGQ--LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM 472 (758)
T ss_dssp EETTT-TE-EEEEEEECCC--CBSSSEEEEEECTTSE--EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCS
T ss_pred cCcCC-Cc-EEEeecCCCcCCCCCceEEEEEEcCCCC--EEEEECCCceEEEccccccccCCcceecccccccccccccc
Confidence 99875 33 22221 1 124577777666665 55566666688888653100000011 11211 123
Q ss_pred ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 322 EINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
.|.++...++|..+++++..+.|..++
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d 499 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKIN 499 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEE
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEe
Confidence 588898888887665334444454443
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.41 E-value=8.5 Score=35.30 Aligned_cols=196 Identities=9% Similarity=0.026 Sum_probs=94.2
Q ss_pred EEEEeC-C-----cEEEEECCCCCchhhe-eccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC------eEEEEeccCc
Q psy17688 93 LLATSG-D-----YLRVWRAGEPETRLEC-ILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT------TCTIWCLETN 159 (349)
Q Consensus 93 ~l~~~~-~-----~i~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~ 159 (349)
+++.|+ + .+.+||..+....... ................+.+.. ++.+++.|+.++ .+.+||+.+.
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 666665 1 6888888776432211 100000000001122233211 566777877543 5778888876
Q ss_pred ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC--cEEEEECCCCCceeeee---eCCCCCceeEEE
Q psy17688 160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG--SVRMFDLRHLEHSTIIY---EDPQHTPLLRLA 234 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~---~~~~~~~v~~~~ 234 (349)
+-... ..+.. ...-.+++...++ .+++.|+.++ .+.+||+.+..-..... ..........+.
T Consensus 479 ~W~~~---------~~~p~-~R~~h~~~~~~~~---~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 479 EWSMI---------KSLSH-TRFRHSACSLPDG---NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp EEEEC---------CCCSB-CCBSCEEEECTTS---CEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred cEEEC---------CCCCC-CcccceEEEEcCC---EEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence 54311 01111 0111222222355 6888887654 79999998865322211 011112223356
Q ss_pred EeCCCCCeEEEEeeC--C----cEEEEEeccCCCc--c--eeEeec----CCcceEEEEEeeCCCCEEEEEcC-------
Q psy17688 235 WNKQDPNYLAMVAMN--A----CEVIILDVRVPCT--P--VARLNN----HRACVNGIAWAPHSSCHICTAGD------- 293 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d--~----~~i~v~d~~~~~~--~--~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~------- 293 (349)
+....+.+++.|+.+ + +.+.+||+.+..- . -..+.. .... .++....++.. ++.|+.
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~i-yv~GG~~~~~~~~ 623 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYG-SQIKYITPRKL-LIVGGTSPSGLFD 623 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEE-EEECCBCSSCCCC
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCccc-ceEEEeCCCEE-EEECCccCCCCCC
Confidence 665236677777752 1 1588999886320 0 111111 1111 12233333554 777774
Q ss_pred -CCcEEEEEeec
Q psy17688 294 -DHQALIWDIQQ 304 (349)
Q Consensus 294 -d~~v~iwd~~~ 304 (349)
...+.+||+.+
T Consensus 624 ~~~~v~~yd~~t 635 (695)
T 2zwa_A 624 RTNSIISLDPLS 635 (695)
T ss_dssp TTTSEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 34588888876
No 342
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.10 E-value=6.1 Score=33.12 Aligned_cols=236 Identities=9% Similarity=-0.021 Sum_probs=103.5
Q ss_pred EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--cEEEEECCCCCchhhe
Q psy17688 39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--YLRVWRAGEPETRLEC 115 (349)
Q Consensus 39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i~vw~~~~~~~~~~~ 115 (349)
+|.+|+. .| +.+++-+.....+...........|.+|.+.|..... +.+.+. + .-.||...........
T Consensus 24 ~l~vgt~----~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~---l~~g~~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 24 MLLVATI----KG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER---MLMAARTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp EEEEEET----TE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC---EEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred EEEEEec----Cc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe---EEEEecCCCCCccEEEeCCCCCCceE
Confidence 4778877 66 5555433211233322111234569999999832211 555443 2 2245544433222222
Q ss_pred eccCC---CCCC-----CcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceee-ee-------ec
Q psy17688 116 ILNNN---KNSD-----FCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT-QL-------IA 178 (349)
Q Consensus 116 ~~~~~---~~~~-----~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~-------~~ 178 (349)
..... .... ....|.++++.|.+ .+.+..+...+-|...+- .++....+......+.. .+ ..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCC
Confidence 11110 0000 11357788888654 667777766666554432 22222111000000000 00 01
Q ss_pred cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-CC----------CCceeEEEEeCCCCCeEEEEe
Q psy17688 179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-PQ----------HTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~----------~~~v~~~~~~~~~~~~l~~~~ 247 (349)
....+.+|.++|... ..+..+..++.|...+-. ++.-...... .. ...+.++.++|.++..++++.
T Consensus 175 ~~~~i~~i~~d~~~~--~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 175 DGPKMHSILVDPRDP--KHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp CCCEEEEEEECTTCT--TCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CCCceeEEEECCCCC--CEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 123578888887431 344445444444433222 2211111100 00 134889999995567777776
Q ss_pred eCCcEEEEEeccCCCcceeEeec--CC---cceEEEEEeeCC-CCEEEEE
Q psy17688 248 MNACEVIILDVRVPCTPVARLNN--HR---ACVNGIAWAPHS-SCHICTA 291 (349)
Q Consensus 248 ~d~~~i~v~d~~~~~~~~~~~~~--~~---~~v~~~~~~p~~-~~~l~~~ 291 (349)
..+ |...+-. ++.-..+.. .. ..+..+.++|.. .. |..+
T Consensus 252 ~~g--l~~s~D~--G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~-l~~~ 296 (394)
T 3b7f_A 252 HCG--IYRMDRR--EGVWKRIGDAMPREVGDIGFPIVVHQRDPRT-VWVF 296 (394)
T ss_dssp TTE--EEEEETT--TTEEECGGGGSCTTTCSCEEEEEECSSCTTC-EEEE
T ss_pred CCe--EEEeCCC--CCcceECCCCCCCCCccceEEEEECCCCCCE-EEEE
Confidence 554 5544322 222222111 11 235678887743 33 4444
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.04 E-value=3.7 Score=33.76 Aligned_cols=61 Identities=7% Similarity=-0.096 Sum_probs=35.7
Q ss_pred cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc-----eeEEE---EeC-CCCCeEEEEeeCCcEEEEEe
Q psy17688 196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP-----LLRLA---WNK-QDPNYLAMVAMNACEVIILD 257 (349)
Q Consensus 196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----v~~~~---~~~-~~~~~l~~~~~d~~~i~v~d 257 (349)
..+++|+.+|.+...|+++++............. ..|.. +.. ..+..++.+..+. .+.+.+
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y-~v~~~~ 181 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIF-ELGIHS 181 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEE-ECEECC
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceE-EEEEEC
Confidence 5889999999999999999986655432211110 00111 100 1245677777777 577766
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.77 E-value=0.39 Score=42.10 Aligned_cols=96 Identities=11% Similarity=0.059 Sum_probs=60.7
Q ss_pred EEEEeccCC---CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC-------CCCCcEEEEeccCCc
Q psy17688 253 VIILDVRVP---CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR-------AIEDPILAYTAAGGE 322 (349)
Q Consensus 253 i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~-------~~~~~~~~~~~~~~~ 322 (349)
|.+.|.+.. +..+..+..-......+..+|||+++++++-.+.++.++|++.... .....+..-..-.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 666776541 1122222223345678899999999888888899999999986321 111112111112456
Q ss_pred eEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688 323 INQIQWGATQPDWIAIC-YNKYLEVLRV 349 (349)
Q Consensus 323 v~~~~~~~~~~~l~~~~-~d~~v~vw~v 349 (349)
....+|.++|. ..++. -|..|.-|++
T Consensus 380 PlHt~Fd~~G~-aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 380 PLHTTFDGRGN-AYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEEEEECSSSE-EEEEETTTTEEEEEEH
T ss_pred ccEEEECCCCc-eEeeeeecceEEEEec
Confidence 78899999994 44544 4899999974
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.27 E-value=6.2 Score=31.82 Aligned_cols=184 Identities=11% Similarity=0.089 Sum_probs=85.9
Q ss_pred EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----CC-------eEEEEeccCcce
Q psy17688 93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----DT-------TCTIWCLETNQV 161 (349)
Q Consensus 93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~ 161 (349)
+++.|+..+..||..+.+.... ...... ...-.++.. .++.+++.|+. ++ .+..||..+.+-
T Consensus 18 i~~~GG~~~~~yd~~~~~W~~~-~~~~~~----~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 18 ILLVNDTAAVAYDPMENECYLT-ALAEQI----PRNHSSIVT--QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEECSSEEEEEETTTTEEEEE-EECTTS----CSSEEEEEC--SSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred hhhccccceEEECCCCCceecc-cCCccC----CccceEEEE--ECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 5555555788899887653321 111101 011122322 36777888873 12 167788876654
Q ss_pred eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-------CcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688 162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 234 (349)
... ..+..... -.+++.. ++ .+++.|+.+ ..+.+||+.+.+-.... .......-.+++
T Consensus 91 ~~~---------~~~p~~r~-~~~~~~~-~~---~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~ 155 (318)
T 2woz_A 91 VGL---------PPLPSARC-LFGLGEV-DD---KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVI 155 (318)
T ss_dssp EEC---------SCBSSCBC-SCEEEEE-TT---EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEE
T ss_pred EEC---------CCCCcccc-ccceEEE-CC---EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEE
Confidence 311 01111111 1122222 44 677777754 35788999876533221 111111112222
Q ss_pred EeCCCCCeEEEEeeC------CcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEe
Q psy17688 235 WNKQDPNYLAMVAMN------ACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDI 302 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d------~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~ 302 (349)
. . ++.+++.|+.+ . .+.+||+.+.. ..+..+.........+. -+++. ++.|+.++ .+.+||+
T Consensus 156 ~-~-~~~iyv~GG~~~~~~~~~-~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i-yv~GG~~~~~~~~~~~~yd~ 229 (318)
T 2woz_A 156 S-H-NGMIYCLGGKTDDKKCTN-RVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKI-VIAGGVTEDGLSASVEAFDL 229 (318)
T ss_dssp E-E-TTEEEEECCEESSSCBCC-CEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEE-EEEEEEETTEEEEEEEEEET
T ss_pred E-E-CCEEEEEcCCCCCCCccc-eEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEE-EEEcCcCCCCccceEEEEEC
Confidence 2 2 66777777642 2 48899987521 11111111111112222 24554 66666432 4667777
Q ss_pred ec
Q psy17688 303 QQ 304 (349)
Q Consensus 303 ~~ 304 (349)
.+
T Consensus 230 ~~ 231 (318)
T 2woz_A 230 KT 231 (318)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.25 E-value=6.1 Score=34.89 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=52.8
Q ss_pred ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC---------c-eeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688 178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE---------H-STIIYEDPQHTPLLRLAWNKQDPNYLAMVA 247 (349)
Q Consensus 178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 247 (349)
.-......+..+|++. ..++++-.+.++.++|++... . .....+..........+|++ ++....+--
T Consensus 320 P~pksPHGv~vsPDGk--yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlf 396 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGK--YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLF 396 (638)
T ss_dssp EESSSCCCEEECTTSC--EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEET
T ss_pred eCCCCCcceeeCCCCC--EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeee
Confidence 3345678899999994 455555678899999998421 1 11222333456678899999 774444445
Q ss_pred eCCcEEEEEeccC
Q psy17688 248 MNACEVIILDVRV 260 (349)
Q Consensus 248 ~d~~~i~v~d~~~ 260 (349)
-|. .|.-|++..
T Consensus 397 idS-qvvkWni~~ 408 (638)
T 3sbq_A 397 IDS-QVVKWNMEE 408 (638)
T ss_dssp TTT-EEEEEEHHH
T ss_pred ecc-eEEEEeccH
Confidence 677 799999864
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.38 E-value=15 Score=33.67 Aligned_cols=162 Identities=12% Similarity=0.094 Sum_probs=76.1
Q ss_pred CCceEEEEEeeecc--cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---cEEEEECCC
Q psy17688 35 DKLFRLAIGSYVEE--YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---YLRVWRAGE 108 (349)
Q Consensus 35 ~~~~~la~g~~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---~i~vw~~~~ 108 (349)
+++. ++.|+.... .-+.+.+|+.. +..............-.++....++. +++.|+ + .+.+||..+
T Consensus 451 ~~~l-yv~GG~~~~~~~~~dv~~yd~~--t~~W~~~~~~p~~R~~h~~~~~~~~~-----iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 451 NNQL-LLIGGRKAPHQGLSDNWIFDMK--TREWSMIKSLSHTRFRHSACSLPDGN-----VLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp TTEE-EEECCBSSTTCBCCCCEEEETT--TTEEEECCCCSBCCBSCEEEECTTSC-----EEEECCBCSSCSEEEEETTT
T ss_pred CCEE-EEEcCCCCCCCccccEEEEeCC--CCcEEECCCCCCCcccceEEEEcCCE-----EEEECCCCCCCCEEEEECCC
Confidence 4553 666665221 12345666554 33333222111121222333323555 777776 3 688999887
Q ss_pred CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--C-----CeEEEEeccCcce-----eeeecccCCceeeee
Q psy17688 109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--D-----TTCTIWCLETNQV-----VGRVNSVSGHVKTQL 176 (349)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~ 176 (349)
......... + ..........++.++...+.+++.|+. + ..+.+||+.+... ...+ ...
T Consensus 523 ~~W~~~~~~-g-~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~--------~~~ 592 (695)
T 2zwa_A 523 EIFKDVTPK-D-EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK--------LQH 592 (695)
T ss_dssp TEEEECCCS-S-GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE--------EEC
T ss_pred CceEEccCC-C-CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc--------CCC
Confidence 643221110 0 000000112234444423667888876 2 4588999988772 1110 010
Q ss_pred eccCCceeeEEEecCCCCccEEEEEcC--------CCcEEEEECCCCCc
Q psy17688 177 IAHDKEVYDIAFSRAGGGRDMFASVGA--------EGSVRMFDLRHLEH 217 (349)
Q Consensus 177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~--------d~~v~iwd~~~~~~ 217 (349)
......-.++....++ .+++.|+. ...+.+||+.+.+-
T Consensus 593 p~~~R~~~~~~~~~~~---~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 593 PLFQRYGSQIKYITPR---KLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp GGGCCBSCEEEEEETT---EEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred CCCCcccceEEEeCCC---EEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 0011111122333325 67777774 34689999988653
No 348
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=88.18 E-value=9 Score=30.86 Aligned_cols=139 Identities=10% Similarity=0.068 Sum_probs=71.8
Q ss_pred EecCCCCCeEEEEE--cCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-CCcE
Q psy17688 133 DWNEVDPNLLGTSS--IDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-EGSV 207 (349)
Q Consensus 133 ~~~~~~~~~l~~~~--~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~~v 207 (349)
.|++ +++.|+-.. .++ .|..-++..... ..+..+.. ..++|++ +.|+-.+. ...|
T Consensus 110 ~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~------------~~lt~~~~----~~~~~~g---~~iy~t~~g~~~I 169 (302)
T 3s25_A 110 YASL-IGNYIYYLHYDTQTATSLYRIRIDGEEK------------KKIKNHYL----FTCNTSD---RYFYYNNPKNGQL 169 (302)
T ss_dssp EEEE-ETTEEEEEEESSSSCEEEEEEETTSCCC------------EEEESSCC----CCSEEET---TEEEEECTTTCCE
T ss_pred EEEE-eCCEEEEEeecCCCCceEEEEECCCCCe------------EEEeCCCc----eEeeEEC---CEEEEEeCCCceE
Confidence 5565 666766655 333 455555553332 23333322 3467777 45554444 6788
Q ss_pred EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688 208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC 286 (349)
Q Consensus 208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 286 (349)
...++.......+ .. .... ..+.| ++.+|+-....+ ..|..-++. +.....+.. ..+ ..|+|++..
T Consensus 170 y~~~l~g~~~~~l-~~----~~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ld--G~~~~~Lt~--~~~--~~~~~~g~~ 236 (302)
T 3s25_A 170 YRYDTASQSEALF-YD----CNCY-KPVVL-DDTNVYYMDVNRDNAIVHVNIN--NPNPVVLTE--ANI--EHYNVYGSL 236 (302)
T ss_dssp EEEETTTTEEEEE-EC----SCEE-EEEEE-ETTEEEEEEGGGTTEEEEECSS--SCCCEECSC--SCE--EEEEEETTE
T ss_pred EEEECCCCCEEEE-eC----CCcc-ceeee-cCCEEEEEEcCCCcEEEEEECC--CCCeEEEeC--CCc--ceEEECCCE
Confidence 8888877554333 22 1222 34568 667666655433 135555555 333444432 223 348889988
Q ss_pred EEEEEc-CCCcEEEEEeec
Q psy17688 287 HICTAG-DDHQALIWDIQQ 304 (349)
Q Consensus 287 ~l~~~~-~d~~v~iwd~~~ 304 (349)
+..+.. ..+.|..-++..
T Consensus 237 Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEEECCCCcEEEEEECCC
Confidence 443322 234455555544
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=86.18 E-value=14 Score=30.92 Aligned_cols=179 Identities=12% Similarity=0.127 Sum_probs=92.4
Q ss_pred eEEEEeccCc--ceeeeecccCCceeeeeeccCCceeeEEEe---cC--CCCccEEEEEcCCCcEEEEECCCCCceeeee
Q psy17688 150 TCTIWCLETN--QVVGRVNSVSGHVKTQLIAHDKEVYDIAFS---RA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIY 222 (349)
Q Consensus 150 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 222 (349)
.|.+||+.+. +.++++.-.. ......+.+.++++. |. ..+....++=+....|.++|+.+++......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~-----~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPT-----RLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCG-----GGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred eEEEEECCCCCceeEEEEECCH-----HhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 5667777777 6664432100 001123457788877 22 1111233444457789999999876443331
Q ss_pred e---CC-------------CCCceeEEEEeCCC----CCeEEEEeeCCcEEEEEeccC-----C--CcceeEeecCCc--
Q psy17688 223 E---DP-------------QHTPLLRLAWNKQD----PNYLAMVAMNACEVIILDVRV-----P--CTPVARLNNHRA-- 273 (349)
Q Consensus 223 ~---~~-------------~~~~v~~~~~~~~~----~~~l~~~~~d~~~i~v~d~~~-----~--~~~~~~~~~~~~-- 273 (349)
. .. ....+..|+.+| + ++.|+.....+ -++|.+.+ . ...+..+ +.++
T Consensus 199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss--~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~ 274 (381)
T 3q6k_A 199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSA--IKVYSVNTKELKQKGGKLNPELL-GNRGKY 274 (381)
T ss_dssp GGGSCCSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSC--SEEEEEEHHHHSSTTCCCCCEEE-EECCTT
T ss_pred CCCccccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCC--CcEEEEEHHHhhCcchhhceEEe-eecCCC
Confidence 0 00 024678899998 5 67777776665 45554432 1 1112222 2222
Q ss_pred -ceEEEEEe-eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCCCceEEE
Q psy17688 274 -CVNGIAWA-PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQPDWIAI 338 (349)
Q Consensus 274 -~v~~~~~~-p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 338 (349)
.-..++.. .+|.. +++--..+.|..|+....+............ .-..+.++...+++..++.+
T Consensus 275 s~~~~~~~D~~~G~l-y~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 275 NDAIALAYDPKTKVI-FFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCEEEEEECTTTCEE-EEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CCcceEEEeCCCCeE-EEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 23345565 45544 7777778889999986511111111111221 12256778887777544433
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.63 E-value=17 Score=29.17 Aligned_cols=170 Identities=9% Similarity=-0.038 Sum_probs=83.3
Q ss_pred EEEecCCCCCCCcEEEEe---C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEE
Q psy17688 80 IMWIPDRKGVFPDLLATS---G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTI 153 (349)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~---~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~i 153 (349)
..|+++++. +..+. . + .|..-+++... .+.+ ..+. + ..|++ +++.|+-.+. ...|..
T Consensus 109 ~~~s~~g~~----Iy~~~~~~~~~~~Iy~~~~dGs~--~~~l-t~~~-------~--~~~~~-~g~~iy~t~~g~~~Iy~ 171 (302)
T 3s25_A 109 IYASLIGNY----IYYLHYDTQTATSLYRIRIDGEE--KKKI-KNHY-------L--FTCNT-SDRYFYYNNPKNGQLYR 171 (302)
T ss_dssp EEEEEETTE----EEEEEESSSSCEEEEEEETTSCC--CEEE-ESSC-------C--CCSEE-ETTEEEEECTTTCCEEE
T ss_pred cEEEEeCCE----EEEEeecCCCCceEEEEECCCCC--eEEE-eCCC-------c--eEeeE-ECCEEEEEeCCCceEEE
Confidence 367888873 33333 2 2 66666666433 2222 2211 1 22344 4455554443 567888
Q ss_pred EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--CcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688 154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--GSVRMFDLRHLEHSTIIYEDPQHTPLL 231 (349)
Q Consensus 154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~v~ 231 (349)
-++..+... ..+. +... ..+.|++ ..|+-...+ ..|..-++......... ...+
T Consensus 172 ~~l~g~~~~-----------~l~~---~~~~-~~~~P~g---~~iy~t~~~~~~~I~~~~ldG~~~~~Lt-----~~~~- 227 (302)
T 3s25_A 172 YDTASQSEA-----------LFYD---CNCY-KPVVLDD---TNVYYMDVNRDNAIVHVNINNPNPVVLT-----EANI- 227 (302)
T ss_dssp EETTTTEEE-----------EEEC---SCEE-EEEEEET---TEEEEEEGGGTTEEEEECSSSCCCEECS-----CSCE-
T ss_pred EECCCCCEE-----------EEeC---CCcc-ceeeecC---CEEEEEEcCCCcEEEEEECCCCCeEEEe-----CCCc-
Confidence 787665543 1122 1222 2356887 566655433 35767777665433222 1233
Q ss_pred EEEEeCCCCCeEEEEeeC-CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688 232 RLAWNKQDPNYLAMVAMN-ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL 298 (349)
Q Consensus 232 ~~~~~~~~~~~l~~~~~d-~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~ 298 (349)
..|+| .+..|+.+... +..|..-++. +.....+... .+. .+++.+.++..+--..+.|.
T Consensus 228 -~~~~~-~g~~Iy~~~~~~~~~i~~~~~D--G~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~ 287 (302)
T 3s25_A 228 -EHYNV-YGSLIFYQRGGDNPALCVVKND--GTGFKELAKG--EFC--NINVTSQYVYFTDFVSNKEY 287 (302)
T ss_dssp -EEEEE-ETTEEEEEECSSSCEEEEEETT--SCCCEEEEES--CEE--EEEECSSEEEEEETTTCCEE
T ss_pred -ceEEE-CCCEEEEEECCCCcEEEEEECC--CCccEEeeCC--ccc--eEEEeCCEEEEEECCCCeEE
Confidence 34777 66777655332 2246666665 4333333322 233 45666777455544445433
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.78 E-value=31 Score=29.73 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=0.0
Q ss_pred eEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc------------CCceeeEEEecC----C
Q psy17688 130 TSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH------------DKEVYDIAFSRA----G 192 (349)
Q Consensus 130 ~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~----~ 192 (349)
..|+|.| ++. .++++...|.|++++....... ..+..- ......|+++|+ +
T Consensus 17 ~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~-----------~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 17 VGALHSG-DGSQRLFILEKEGYVKILTPEGEIFK-----------EPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEECCS-SSSCCEEEEETTTEEEEECTTSCBCS-----------SCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred eEEEECC-CCCeEEEEEeCCceEEEEeCCCCeee-----------eeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Q ss_pred CCccEEEEEcCCC------------cEEEEECC----------CCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688 193 GGRDMFASVGAEG------------SVRMFDLR----------HLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250 (349)
Q Consensus 193 ~~~~~l~~~~~d~------------~v~iwd~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 250 (349)
.+.++-+.+. .|.-|.+. +.+.+..............|+|.| ++.++++.+..+
T Consensus 85 ---~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 85 ---KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp ---EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred ---EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.48 E-value=32 Score=28.64 Aligned_cols=163 Identities=12% Similarity=0.056 Sum_probs=74.1
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee----ccCCceeeEEEecCCCCccEEEEEc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI----AHDKEVYDIAFSRAGGGRDMFASVG 202 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~l~~~~ 202 (349)
..+.+|.++|.+.+.+..+..++.|...+ ..++....+.. +.....+. .-...+..+.++|... ..+..+.
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~--~~~~~~~p~~~~~~g~~~~~i~~~~~~~--~~l~vg~ 251 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNR--GCAANFLPDPNVEFGHDPHCVVQHPAAP--DILYQQN 251 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCT--TCCCTTSSSSSSSSCBCEEEEEECSSST--TEEEEEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCC--CccccccCCCccccCcceeEEEECCCCC--CEEEEEc
Confidence 45778888875556666666555444332 22222211100 00000000 0012478899988632 4566565
Q ss_pred CCCcEEEEECCCCCceeeeee-CCC--CCceeEEEEeCCCCCeEEEEee-----------CCcEEEEEeccCCCcceeEe
Q psy17688 203 AEGSVRMFDLRHLEHSTIIYE-DPQ--HTPLLRLAWNKQDPNYLAMVAM-----------NACEVIILDVRVPCTPVARL 268 (349)
Q Consensus 203 ~d~~v~iwd~~~~~~~~~~~~-~~~--~~~v~~~~~~~~~~~~l~~~~~-----------d~~~i~v~d~~~~~~~~~~~ 268 (349)
..+ |...+-.. +.-..+.. ... ...+..++++|.+...++++.. ++. ..+|.....++.-..+
T Consensus 252 ~~g-l~~s~D~G-~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~-~~~~~S~DgG~tW~~~ 328 (394)
T 3b7f_A 252 HCG-IYRMDRRE-GVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGK-PAVYVTRDAGESWQRQ 328 (394)
T ss_dssp TTE-EEEEETTT-TEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSS-CCEEEESSTTSCCEEE
T ss_pred CCe-EEEeCCCC-CcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCc-eeEEEECCCCCCceEC
Confidence 544 44443222 21111111 111 0235678888755555665542 222 4556554433333322
Q ss_pred ec---CCc-----ceEEEEEeeCC-CCEEEEEcCCCcEE
Q psy17688 269 NN---HRA-----CVNGIAWAPHS-SCHICTAGDDHQAL 298 (349)
Q Consensus 269 ~~---~~~-----~v~~~~~~p~~-~~~l~~~~~d~~v~ 298 (349)
.. ... ....++++|.. .. |+.++.++.|.
T Consensus 329 ~~glp~~~~~~~~~~~~~~~~p~~~~~-l~~g~~~g~l~ 366 (394)
T 3b7f_A 329 DRGLPTDQAWLTVKRQAMTADAHAPVG-VYFGTTGGEIW 366 (394)
T ss_dssp CBTSCCSSCCCCCCTBSEEECCSSSCC-EEEECTTSCEE
T ss_pred CCCCCCccccceEEEEEEEECCCCCCE-EEEEeCCCeEE
Confidence 11 000 11357888754 44 66666555544
No 353
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=75.08 E-value=31 Score=27.83 Aligned_cols=201 Identities=12% Similarity=0.108 Sum_probs=108.7
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC---C
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR---H 214 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~---~ 214 (349)
+...+++.+.+|.|+--.+...+....- ..+.....+... +.+..+...... ..++..+..|.++-+... .
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~--~~g~~~~~lke~-D~l~~~~~~~~~---~~ll~~T~~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTG--GKGLSSFDLNDG-DEIVIALCVNTH---DYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSS--CCCEECCCCCTT-CCEEEEEEEETT---CEEEEEETTSEEEEEEGGGSCC
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccC--CCCceecccCCC-CEEEEEEEECCC---CEEEEEECCCeEEEEEHHHCCC
Confidence 5678899999999998877654332100 000001122333 334444444444 577777888887766543 2
Q ss_pred CC------ceeeeeeCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCC------CcceeEeecCCcceEEEEE
Q psy17688 215 LE------HSTIIYEDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVP------CTPVARLNNHRACVNGIAW 280 (349)
Q Consensus 215 ~~------~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~ 280 (349)
.. +............|..+..-+. ...+++..+.+| .++...+... +.....+.. .+.+..+..
T Consensus 81 ~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G-~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~ 158 (312)
T 1suu_A 81 SSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASG-KIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEI 158 (312)
T ss_dssp -------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGCC----CEECBCCCT-TCCEEEEEE
T ss_pred CCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCC-eEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEE
Confidence 11 1000111223344555543321 356788889999 6888876431 222223333 456666665
Q ss_pred eeCCCCEEEEEcCCCcEEEEEeecCCCC----CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688 281 APHSSCHICTAGDDHQALIWDIQQMPRA----IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR 348 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~ 348 (349)
...... ++..+.+|.+..+........ .......+.. ...|.++..-.++..+++.+..|..+...
T Consensus 159 ~~~~~~-i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~ 228 (312)
T 1suu_A 159 VFKDEK-VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLN 228 (312)
T ss_dssp ECTTCE-EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEE
T ss_pred eCCCCE-EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEE
Confidence 554555 778888999988887653211 1111112222 45666665555555688888888776654
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.04 E-value=23 Score=32.41 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=29.8
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS 167 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (349)
..|.++.+ +..++++-+.|.++|+|++.+++.+...+.
T Consensus 222 ~~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34665554 467999999999999999999998865543
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=73.73 E-value=35 Score=27.78 Aligned_cols=200 Identities=11% Similarity=0.052 Sum_probs=105.0
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE---EECCC
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM---FDLRH 214 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i---wd~~~ 214 (349)
....+++.+.+|.|+--.+.+.+....- -.+.....++. .+.+..+...... ..++.-+..|.++- |++..
T Consensus 2 ~E~v~v~ls~~GyiKr~~~~~y~~~~rg--g~g~~~~~~ke-~D~~~~~~~~~t~---d~ll~fT~~Gr~y~~~~~~lp~ 75 (327)
T 3uc1_A 2 AEDVVVTITETGYAKRTKTDLYRSQKRG--GKGVQGAGLKQ-DDIVAHFFVCSTH---DLILFFTTQGRVYRAKAYDLPE 75 (327)
T ss_dssp CCEEEEEEETTSEEEEEEHHHHHHHC----------CCCCG-GGCEEEEEEEETT---SEEEEEETTSEEEEEEGGGSCB
T ss_pred CccEEEEEeCCCEEEEeeHHHhhhcccC--CCCccccccCC-CCEEEEEEEeCCC---CEEEEEeCCCeEEEEEHHHCcC
Confidence 3457888899999997665543221000 00000011222 2334444433344 45665666676554 44443
Q ss_pred CC------ceeeeeeCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCCC------cceeEeecCCcceEEEEE
Q psy17688 215 LE------HSTIIYEDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVPC------TPVARLNNHRACVNGIAW 280 (349)
Q Consensus 215 ~~------~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~~------~~~~~~~~~~~~v~~~~~ 280 (349)
.. +...+........|..+..-+. +..++++.+.+| .++--.+.... .....+.. .+.+..+..
T Consensus 76 ~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G-~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~ 153 (327)
T 3uc1_A 76 ASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNG-LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVL 153 (327)
T ss_dssp CCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTS-EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEE
T ss_pred CCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCC-EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEE
Confidence 21 1111111223455655544331 467999999999 69988765411 11222333 345555555
Q ss_pred eeCCCCEEEEEcCCCcEEEEEee--cCCCC----CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688 281 APHSSCHICTAGDDHQALIWDIQ--QMPRA----IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~~v~iwd~~--~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw 347 (349)
...... |+..+..|.+..+... ..+.. ...+...+.. ...|.++...+.+.+++..+..|.++.-
T Consensus 154 ~~~~d~-ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 154 CSAGDD-LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp ECTTCE-EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred ecCCCE-EEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 555566 7777889998888776 32211 1111112223 5567777666666678888888877653
No 356
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=72.50 E-value=37 Score=27.56 Aligned_cols=194 Identities=11% Similarity=0.054 Sum_probs=102.4
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE---CCC
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD---LRH 214 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd---~~~ 214 (349)
+...+++.+.+|.|+--.+...+... .....+.... .+..+...... ..++..+..|.++-+. +..
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~-------~~~~~lke~D-~l~~~~~~~t~---d~ll~fT~~Gr~~~~~~~elp~ 72 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASN-------GQDFAMKDTD-RLLAMLEMNTK---DVLLLFTNKGNYLYCPVHELPD 72 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTT-------TCCCCCCTTC-CEEEEEEEETT---SEEEEEETTSEEEEEEGGGSCB
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcC-------ccccccCCCC-EEEEEEEECCC---CEEEEEECCCEEEEEEHHHCcC
Confidence 56788999999999977655332210 0001233333 34344444344 4666677777765544 332
Q ss_pred CC------ceeeeeeCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCC-------CcceeEeecCCcceEEEE
Q psy17688 215 LE------HSTIIYEDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVP-------CTPVARLNNHRACVNGIA 279 (349)
Q Consensus 215 ~~------~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~-------~~~~~~~~~~~~~v~~~~ 279 (349)
.. +............|.++..-+. ++.+++..+.+| .++-..+... +.....+.. .+.+..+.
T Consensus 73 ~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G-~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~ 150 (323)
T 1wp5_A 73 IRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNG-MVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVH 150 (323)
T ss_dssp CCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTS-EEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEE
T ss_pred CCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCC-eEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEE
Confidence 21 1111111223345655433331 256788999999 6998877421 111222332 25565555
Q ss_pred EeeCCCCEEEEEcCCCcEEEEEeecCCCC--CCCcEE--EEeccCCceEEEEEcCCCC-ceEEEEcCCeEEE
Q psy17688 280 WAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPIL--AYTAAGGEINQIQWGATQP-DWIAICYNKYLEV 346 (349)
Q Consensus 280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~v 346 (349)
....... ++..+.+|.+..++....... ...-.. .+.. .+.|.++..-+++. .++..+..|..+.
T Consensus 151 ~~~~~~~-i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr 220 (323)
T 1wp5_A 151 LTDGMNE-LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKK 220 (323)
T ss_dssp EECSCSE-EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEE
T ss_pred EeCCCCE-EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEE
Confidence 5555555 777788999888877653211 011111 1222 44566665444444 5777887777554
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.57 E-value=89 Score=29.93 Aligned_cols=38 Identities=26% Similarity=0.255 Sum_probs=31.0
Q ss_pred ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688 128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN 166 (349)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 166 (349)
.+.++...+ +..++++-+.|+++++|++.+++++.+.+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 455666655 77899999999999999999999886643
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.67 E-value=93 Score=29.81 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=29.9
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL 268 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~ 268 (349)
.+.+++..+ +..++++-+.|+ .+|+|++.+ ++++.+.
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~-~LRiWsl~t-~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDY-KLKVLDLST-NQCVETI 273 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTC-EEEEEETTT-TEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCC-EEEEEECCC-CCeEeee
Confidence 466777777 788999999999 699999997 7666654
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=64.96 E-value=86 Score=28.83 Aligned_cols=98 Identities=11% Similarity=0.135 Sum_probs=57.2
Q ss_pred CCCcEEEEECCCCC-------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccCCCc-ceeE-eecC-
Q psy17688 203 AEGSVRMFDLRHLE-------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRVPCT-PVAR-LNNH- 271 (349)
Q Consensus 203 ~d~~v~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~~~~-~~~~-~~~~- 271 (349)
..+.|...|+.++. ....+........+..+.|.. ..++++...++. .+.++|+.. +. .... +...
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~~~~~~~~~~~l~~~~~~~-g~~~~~~~i~lp~ 394 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--DRVFLATYDNVVAKVVTFTLEN-EQWTKPVVLKLPY 394 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS--SCEEEEEEETTEEEEEEECEET-TEECCCEEECCCS
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC--CEEEEEEEECCEEEEEEEECCC-CceEEEeccCCCC
Confidence 46778999987642 222333334456678888886 467777777763 366777654 32 2232 2211
Q ss_pred CcceEEEEEeeCCCCEEEEEcC---CCcEEEEEee
Q psy17688 272 RACVNGIAWAPHSSCHICTAGD---DHQALIWDIQ 303 (349)
Q Consensus 272 ~~~v~~~~~~p~~~~~l~~~~~---d~~v~iwd~~ 303 (349)
.+.+.....++++..++++.+. -+.+..+|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 395 QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 3456666777777765555443 3456666654
No 360
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=64.31 E-value=93 Score=29.00 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=77.2
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec----cCCceeeEEEecCCCCccEEEEEc
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA----HDKEVYDIAFSRAGGGRDMFASVG 202 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~ 202 (349)
..|.++.++|.+...++.+...+.|...+ +.++.-..+ ..... ....+.+++++|... ..++.+.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~--------~~~~~~~~~~~~~i~~ia~dp~~~--~~i~~~~ 83 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPL--------NDFIEAQDMNIMGTESIALDPNNP--DRLYLAQ 83 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEES--------CTTCCGGGGGGCSEEEEEEETTEE--EEEEEEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeEC--------ccCCCcccccCCceeEEEECCCCC--CEEEEEe
Confidence 57899999997778888888777665443 233333111 00000 124689999988542 3444443
Q ss_pred CCCc----EEEE-ECCCCCceeeeeeC-C------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-
Q psy17688 203 AEGS----VRMF-DLRHLEHSTIIYED-P------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN- 269 (349)
Q Consensus 203 ~d~~----v~iw-d~~~~~~~~~~~~~-~------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~- 269 (349)
.+.. -.|| ....++.-..+... . ....+..++++|.+...++.+...+. | |-....++.-..+.
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g-l--~~S~DgG~TW~~~~~ 160 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG-I--WKSSDRAKTWTNVTS 160 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC-E--EEESSTTSSCEEETT
T ss_pred CccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC-E--EEECCCCcccCCCcc
Confidence 2211 2233 23333322222111 0 11135678899866677777764442 3 32222122222221
Q ss_pred -----cCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688 270 -----NHRACVNGIAWAPHSSCHICTAGDD 294 (349)
Q Consensus 270 -----~~~~~v~~~~~~p~~~~~l~~~~~d 294 (349)
.....+..+.++|.....++.+..+
T Consensus 161 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 161 IPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp SCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578889988543225555443
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=60.47 E-value=61 Score=25.59 Aligned_cols=219 Identities=15% Similarity=0.072 Sum_probs=112.2
Q ss_pred CCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688 75 YPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW 154 (349)
Q Consensus 75 ~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw 154 (349)
..|..++-..... +++ ..+.+..|-.......-... .....|..++-. ....++. . ||.|..|
T Consensus 24 ~~i~~ia~G~~h~-----~~l-~~G~v~~wG~n~~Gqlg~p~-------~~~~~i~~ia~G--~~hs~~l-~-~G~v~~w 86 (282)
T 3qhy_B 24 SGVDAIAGGYFHG-----LAL-KGGKVLGWGANLNGQLTMPA-------ATQSGVDAIAAG--NYHSLAL-K-DGEVIAW 86 (282)
T ss_dssp SSCCEEEECSSEE-----EEE-ETTEEEEEECCSSSTTSCCG-------GGGSCCCEEEEC--SSEEEEE-E-TTEEEEE
T ss_pred CCCcEEEeCCCeE-----EEE-ECCEEEEEeCCCCCCCCCCc-------cCCCCEEEEEeC--CCEEEEE-E-CCEEEEe
Confidence 3677777655442 333 33388888765432111000 011356666642 3344444 4 8999999
Q ss_pred eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688 155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLA 234 (349)
Q Consensus 155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 234 (349)
-......+. .+ ..-...|..++..... .++ -. ||.|+.|-.......... ......|..++
T Consensus 87 G~n~~Gqlg-------~P----~~~~~~v~~ia~G~~h----s~a-l~-~G~v~~wG~n~~gqlg~~--~~~~~~i~~i~ 147 (282)
T 3qhy_B 87 GGNEDGQTT-------VP----AEARSGVDAIAAGAWA----SYA-LK-DGKVIAWGDDSDGQTTVP--AEAQSGVTALD 147 (282)
T ss_dssp ECCTTSTTC-------CC----GGGSSSEEEEEEETTE----EEE-EE-TTEEEEEECCTTSTTSCC--GGGGSSEEEEE
T ss_pred eCCCCCCCC-------CC----cccCCCeEEEECcCCE----EEE-Ee-CCeEEEecCCCCCcCCCC--ccCCCCeEEEE
Confidence 766543331 00 0112467777776543 333 33 899999976543221110 11224566666
Q ss_pred EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688 235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL 314 (349)
Q Consensus 235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 314 (349)
... ...++ -. ++ .|..|-....++.-.. ..-...|..++...+.. ++. .||.|+.|=.....+. ..|.
T Consensus 148 ~G~--~~~~~-l~-~G-~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~hs--~al--~~G~v~~wG~n~~gql-g~p~- 215 (282)
T 3qhy_B 148 GGV--YTALA-VK-NG-GVIAWGDNYFGQTTVP-AEAQSGVDDVAGGIFHS--LAL--KDGKVIAWGDNRYKQT-TVPT- 215 (282)
T ss_dssp ECS--SEEEE-EE-TT-EEEEEECCTTSTTSCC-GGGGSSEEEEEECSSEE--EEE--ETTEEEEEECCTTSTT-CCCG-
T ss_pred ccc--CEEEE-EE-CC-EEEEecCCCCCCCCCc-eecCCCeEEEEecCCEE--EEE--ECCeEEEEECCCCCCC-CCCc-
Confidence 543 22333 33 78 5999977653332111 11134577776543322 333 5999999976553221 1111
Q ss_pred EEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688 315 AYTAAGGEINQIQWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 315 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw 347 (349)
. ....|..++-.... .++.. |+.|..|
T Consensus 216 --~-~~~~v~~i~~G~~h--~~al~-~g~v~~w 242 (282)
T 3qhy_B 216 --E-ALSGVSAIASGEWY--SLALK-NGKVIAW 242 (282)
T ss_dssp --G-GGSSCCEEEECSSC--EEEEE-TTEEEEE
T ss_pred --c-cCCCceEEEcCCCE--EEEEE-CCEEEEe
Confidence 1 12356677655543 34444 8888887
No 362
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=58.74 E-value=1.2e+02 Score=28.33 Aligned_cols=163 Identities=10% Similarity=-0.022 Sum_probs=76.5
Q ss_pred CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCC-CcCceeEEEecCCCCCeEEEEEcCCe-
Q psy17688 74 PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSD-FCAPLTSFDWNEVDPNLLGTSSIDTT- 150 (349)
Q Consensus 74 ~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~- 150 (349)
...|.+|+++|..... +++.+.. .| |...+.......+........ ....+.+++++|.+.+.++.+..+..
T Consensus 14 ~g~i~~i~~~p~~~~~---~~a~~~~ggv--~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDL---LYARTDIGGA--YRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CSCEEEEEECSSSTTC---EEEEESSSCE--EEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCcEEEEEECCCCCCE---EEEEecCCCE--EEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC
Confidence 4589999999976542 4444333 43 433333222222211110000 12468899998755566665543211
Q ss_pred ---EEEEe-ccCcceeeeecccCCceeeeeec---cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688 151 ---CTIWC-LETNQVVGRVNSVSGHVKTQLIA---HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE 223 (349)
Q Consensus 151 ---i~iwd-~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 223 (349)
-.||- .+.++.-..+... ..... ....+..++++|... ..++.+...+.|.. ....++.-..+..
T Consensus 89 ~~~~~v~~S~DgG~TW~~~~~~-----~~~~~~~~~~~~~~~iav~p~~~--~~v~~g~~~~gl~~-S~DgG~TW~~~~~ 160 (789)
T 1sqj_A 89 DEWAAFYVSEDRGQSFTIYESP-----FPMGANDMGRNNGERLAVNPFNS--NEVWMGTRTEGIWK-SSDRAKTWTNVTS 160 (789)
T ss_dssp SSCCEEEEESSTTSEEEEEECS-----SCCCTTSTTTTSCCCEEEETTEE--EEEEEECSSSCEEE-ESSTTSSCEEETT
T ss_pred CcccEEEEECCCCCcceeccCC-----cccCccCCCccceeEEEEcCCCC--CEEEEEeccCCEEE-ECCCCcccCCCcc
Confidence 23343 3334333211000 00000 011356788888642 56666664443321 2222332222211
Q ss_pred C----CCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688 224 D----PQHTPLLRLAWNKQDPNYLAMVAMN 249 (349)
Q Consensus 224 ~----~~~~~v~~~~~~~~~~~~l~~~~~d 249 (349)
. .....+..+.++|.++..++++..+
T Consensus 161 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 161 IPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp SCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred CccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1 1124578899999666677777655
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.06 E-value=44 Score=32.72 Aligned_cols=36 Identities=8% Similarity=0.206 Sum_probs=28.7
Q ss_pred ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee
Q psy17688 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI 220 (349)
Q Consensus 182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 220 (349)
.+.+++..++. .++++-+.|+++|+||+.++++...
T Consensus 239 ~~vs~~~~~~~---~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTY---NVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTT---TEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCc---cEEEEEeCCCEEEEEECCCCCeEEe
Confidence 35566666766 7999999999999999999876544
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=53.08 E-value=1.4e+02 Score=27.46 Aligned_cols=192 Identities=11% Similarity=0.084 Sum_probs=94.9
Q ss_pred ecCCCCCeEEEE-EcCC----eEEEEeccCcceeeeecccCCceeeeee-ccCC------ceeeEEEecCCCCccEEEEE
Q psy17688 134 WNEVDPNLLGTS-SIDT----TCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDK------EVYDIAFSRAGGGRDMFASV 201 (349)
Q Consensus 134 ~~~~~~~~l~~~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~~~~l~~~ 201 (349)
++| ++++++.+ |..| .++++|+.+++.+. ..+. .-+. ....++|...+ ..+++.
T Consensus 137 ~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~----------~~~~~~~k~~~~~~~~~~~~~W~d~~---~~~~~~ 202 (711)
T 4hvt_A 137 CFQ-NPNRYLISMSFGGKDEMFFREWDLEKKDFVK----------NGFEPITNSGKLLEGKFTYPTWINKD---TIIFNL 202 (711)
T ss_dssp CSS-STTEEEEEEEETTCSEEEEEEEETTTTEECT----------TCSCCBCTTCCBCCEETCCEEEEETT---EEEECC
T ss_pred cCC-CCCEEEEEeCCCCCceeEEEEEECCcCCcCC----------CCcccccccccccccccceeeEECCC---EEEEEe
Confidence 666 66655543 4333 69999999988762 1111 0000 12345887544 344432
Q ss_pred c----------CCCcEEEEECCCCC-ceeeeeeCCCCCceeEEEEeCCCCC-----eEEEEe--eCCcEEEEEeccCCCc
Q psy17688 202 G----------AEGSVRMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPN-----YLAMVA--MNACEVIILDVRVPCT 263 (349)
Q Consensus 202 ~----------~d~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-----~l~~~~--~d~~~i~v~d~~~~~~ 263 (349)
. ....|+.|.+-+.. .-..++......--.....++ ++. .+++.+ ...+.+.+.|...+..
T Consensus 203 ~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 203 VLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred CCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 1 22568899888763 223444433333233444555 444 233333 2222466767653223
Q ss_pred ceeEeecCCcceEEEEEeeCCCCEEEEE-c---------CCCcEEEEEeecCCCC---CCCcEEEEec-cCCceEEEEEc
Q psy17688 264 PVARLNNHRACVNGIAWAPHSSCHICTA-G---------DDHQALIWDIQQMPRA---IEDPILAYTA-AGGEINQIQWG 329 (349)
Q Consensus 264 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~---------~d~~v~iwd~~~~~~~---~~~~~~~~~~-~~~~v~~~~~~ 329 (349)
.+..+...... .+..++++.. ++.. + ..+.|...|+...... .......+.. ....+.++.|.
T Consensus 282 ~~~~l~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (711)
T 4hvt_A 282 KLQKINMPSDA--TLQGSFKEYV-FWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT 358 (711)
T ss_dssp EEEECCSCTTC--EEEEEETTEE-EEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC
T ss_pred cceEeecCCcc--eEeeeECCEE-EEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE
Confidence 33333322221 1344556655 4422 1 3677899998774210 1112222333 24467788888
Q ss_pred CCCCceEEEEcCCeE
Q psy17688 330 ATQPDWIAICYNKYL 344 (349)
Q Consensus 330 ~~~~~l~~~~~d~~v 344 (349)
.+. .+++...++.-
T Consensus 359 ~~~-l~~~~~~~~~~ 372 (711)
T 4hvt_A 359 KDR-VFLATYDNVVA 372 (711)
T ss_dssp SSC-EEEEEEETTEE
T ss_pred CCE-EEEEEEECCEE
Confidence 764 44555555543
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=48.67 E-value=1e+02 Score=24.68 Aligned_cols=200 Identities=10% Similarity=0.019 Sum_probs=100.6
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE---CCC
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD---LRH 214 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd---~~~ 214 (349)
+...+++.+.+|.|+--.+...+....- ..+.....+.... .+..+...... ..++..+..|.++-+. +..
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~--~~g~~~~~~ke~D-~l~~~~~~~~~---~~ll~fT~~G~~~~~~~~elp~ 75 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRG--GKGKSAARIKEED-FIDRLLVANTH---DHILCFSSRGRVYSMKVYQLPE 75 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC----------------------C-CEEEEEEEETT---CEEEEEETTSEEEEEEGGGSCC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccC--CCCceeeeeCCCC-EEEEEEEECCC---CEEEEEECCCEEEEEEhhHCcC
Confidence 4567889999999987776553332100 0000001122332 33333333334 4666677777755544 433
Q ss_pred CCc------eeeeeeCCCCCceeEEEEeC--CCCCeEEEEeeCCcEEEEEeccCC------CcceeEeecCCcceEEEEE
Q psy17688 215 LEH------STIIYEDPQHTPLLRLAWNK--QDPNYLAMVAMNACEVIILDVRVP------CTPVARLNNHRACVNGIAW 280 (349)
Q Consensus 215 ~~~------~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~ 280 (349)
... ............|..+..-+ .+..+++..+.+| .++-..+... +.....+..+ +.+..+..
T Consensus 76 ~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G-~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~ 153 (307)
T 1zi0_A 76 ATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANG-TVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDL 153 (307)
T ss_dssp CCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEE
T ss_pred CCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCC-eEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEE
Confidence 211 11111122344566554322 1456788999999 6998876421 1112223333 55655555
Q ss_pred eeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688 281 APHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL 347 (349)
Q Consensus 281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw 347 (349)
...... ++..+.+|.+..++....+... ......+.. .+.|.++...+++..++..+..|.++-.
T Consensus 154 ~~~~~~-i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~ 222 (307)
T 1zi0_A 154 TSGEDE-VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRT 222 (307)
T ss_dssp ECTTCE-EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEE
T ss_pred eCCCCE-EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEE
Confidence 555555 7777888988888775532210 111112222 4566666555555567888887776654
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=47.17 E-value=1e+02 Score=24.24 Aligned_cols=198 Identities=11% Similarity=0.024 Sum_probs=107.7
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEE---eccCcceeeeecccCCceeeeeeccCCceeeEEEec--CCCCccEEEEE
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIW---CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR--AGGGRDMFASV 201 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iw---d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~l~~~ 201 (349)
..+..+.-.. ..+.|+.-+.+|.++-- ++...... . + +. ....|..+.. + +. ..++..
T Consensus 24 D~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~-------~--l--l~-~~e~i~~v~~-~~~~~---~~~v~~ 86 (276)
T 3no0_A 24 APVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKV-------S--L--KS-REEKIVGAFI-REKFG---NRLLLA 86 (276)
T ss_dssp CCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEEC-------C--C--SS-TTCCEEEEEE-GGGSC---SEEEEE
T ss_pred CeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCccc-------c--c--CC-CCCEEEEEEC-CcCCC---CEEEEE
Confidence 4454444433 44566667777876643 33322111 0 1 22 2445655543 3 33 689999
Q ss_pred cCCCcEEEEECCCCC---ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC--------CcceeEeec
Q psy17688 202 GAEGSVRMFDLRHLE---HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP--------CTPVARLNN 270 (349)
Q Consensus 202 ~~d~~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~--------~~~~~~~~~ 270 (349)
+.+|.++-..+..-. .............+..+.... +...++..+..| .+..+....- +.....+..
T Consensus 87 T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~-~~~~ill~T~~G-~~~r~~~~eip~~gR~a~Gv~~i~L~~ 164 (276)
T 3no0_A 87 TKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSV-DETHILLFTKKG-RVARFSVREVPPSTPGARGVQGIKLEK 164 (276)
T ss_dssp ETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECC-SSCEEEEEETTS-EEEEEEGGGSCBCCTTCCCEECCCCCT
T ss_pred eCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeC-CCCEEEEEECCC-EEEEEEhhhCCCcCCCCCCEEEEccCC
Confidence 999999998875432 011111112345566665555 566788888888 4777765321 112222332
Q ss_pred CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC--CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688 271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI--EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV 346 (349)
Q Consensus 271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 346 (349)
...|..+...+++.. ++..+..|.++...+....... .+-+..+. ..+.+..+........++..+.+|.+..
T Consensus 165 -~d~vv~~~~~~~~~~-ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 165 -NDETSGLRIWNGEPY-LLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp -TCCEEEEEEESSCSE-EEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred -CCEEEEEEEeCCCCE-EEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 355666655555666 8888899999998877644321 11222222 2445555443333335677777766554
No 367
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=46.33 E-value=1.3e+02 Score=26.22 Aligned_cols=73 Identities=10% Similarity=-0.067 Sum_probs=43.7
Q ss_pred ceEEEEEeeC----CCC-EEEEEcCCCcEEEEEee-cCCC-C-CCCcEEEEec--cCCceEEEEEcCCCCceEEEEcCCe
Q psy17688 274 CVNGIAWAPH----SSC-HICTAGDDHQALIWDIQ-QMPR-A-IEDPILAYTA--AGGEINQIQWGATQPDWIAICYNKY 343 (349)
Q Consensus 274 ~v~~~~~~p~----~~~-~l~~~~~d~~v~iwd~~-~~~~-~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~ 343 (349)
..++|+...- +.+ ++..|+.+|.|.=.-+. .... . ....+..+.. ...+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677766543 433 57788889976433222 2110 0 0112233332 2579999999999999999988887
Q ss_pred EEE
Q psy17688 344 LEV 346 (349)
Q Consensus 344 v~v 346 (349)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 368
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.91 E-value=1.1e+02 Score=24.12 Aligned_cols=225 Identities=11% Similarity=0.048 Sum_probs=112.1
Q ss_pred CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCce
Q psy17688 50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPL 129 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i 129 (349)
+|.|..|-.+.. +++-.. ......|..++-..+.. +++ -.+.|..|-.......- ... .....|
T Consensus 41 ~G~v~~wG~n~~-Gqlg~p--~~~~~~i~~ia~G~~hs-----~~l-~~G~v~~wG~n~~Gqlg--~P~-----~~~~~v 104 (282)
T 3qhy_B 41 GGKVLGWGANLN-GQLTMP--AATQSGVDAIAAGNYHS-----LAL-KDGEVIAWGGNEDGQTT--VPA-----EARSGV 104 (282)
T ss_dssp TTEEEEEECCSS-STTSCC--GGGGSCCCEEEECSSEE-----EEE-ETTEEEEEECCTTSTTC--CCG-----GGSSSE
T ss_pred CCEEEEEeCCCC-CCCCCC--ccCCCCEEEEEeCCCEE-----EEE-ECCEEEEeeCCCCCCCC--CCc-----ccCCCe
Confidence 788888865433 322111 11223577776655443 333 32388888765432110 000 001357
Q ss_pred eEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE
Q psy17688 130 TSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM 209 (349)
Q Consensus 130 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i 209 (349)
..++-. ....+.-. ||.|..|-......+. ........|..++..... .++. . ||.|..
T Consensus 105 ~~ia~G---~~hs~al~-~G~v~~wG~n~~gqlg-----------~~~~~~~~i~~i~~G~~~----~~~l-~-~G~v~~ 163 (282)
T 3qhy_B 105 DAIAAG---AWASYALK-DGKVIAWGDDSDGQTT-----------VPAEAQSGVTALDGGVYT----ALAV-K-NGGVIA 163 (282)
T ss_dssp EEEEEE---TTEEEEEE-TTEEEEEECCTTSTTS-----------CCGGGGSSEEEEEECSSE----EEEE-E-TTEEEE
T ss_pred EEEECc---CCEEEEEe-CCeEEEecCCCCCcCC-----------CCccCCCCeEEEEcccCE----EEEE-E-CCEEEE
Confidence 677653 23333344 8999999765533321 011123457777665443 3333 3 689999
Q ss_pred EECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEE
Q psy17688 210 FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHIC 289 (349)
Q Consensus 210 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 289 (349)
|-.........- ......|..++-.. ...++. .++ .|..|-....++.-.... ....|..|+.... +.++
T Consensus 164 wG~n~~gqlg~p--~~~~~~v~~i~~G~--~hs~al--~~G-~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~--h~~a 233 (282)
T 3qhy_B 164 WGDNYFGQTTVP--AEAQSGVDDVAGGI--FHSLAL--KDG-KVIAWGDNRYKQTTVPTE-ALSGVSAIASGEW--YSLA 233 (282)
T ss_dssp EECCTTSTTSCC--GGGGSSEEEEEECS--SEEEEE--ETT-EEEEEECCTTSTTCCCGG-GGSSCCEEEECSS--CEEE
T ss_pred ecCCCCCCCCCc--eecCCCeEEEEecC--CEEEEE--ECC-eEEEEECCCCCCCCCCcc-cCCCceEEEcCCC--EEEE
Confidence 976543221110 01124567776542 334444 588 699997665333211111 1234666665433 3133
Q ss_pred EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688 290 TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ 332 (349)
Q Consensus 290 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 332 (349)
. . ||.|+.|=.....+ +. . ...|.+++-....
T Consensus 234 l-~-~g~v~~wG~n~~gq-----~~---v-~~~v~~iaaG~~h 265 (282)
T 3qhy_B 234 L-K-NGKVIAWGSSRTAP-----SS---V-QSGVSSIEAGPNA 265 (282)
T ss_dssp E-E-TTEEEEESTTCCCC-----GG---G-SSCEEEEEECSSC
T ss_pred E-E-CCEEEEecCCCCcc-----cc---C-CCCcEEEEECcCe
Confidence 3 3 99999996554221 11 0 2356667666554
No 369
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=45.82 E-value=1.8e+02 Score=26.74 Aligned_cols=159 Identities=14% Similarity=0.016 Sum_probs=0.0
Q ss_pred CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC------CceeeEEEecCCCCccEEEE
Q psy17688 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD------KEVYDIAFSRAGGGRDMFAS 200 (349)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~l~~ 200 (349)
..|..++++|.+.+.+.++...+.|...+-....-. ....... ..|.+|+++|... +.++.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~-----------~i~~~~~~~~~~~~~i~~i~~dp~~~--~~v~v 89 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWI-----------PLLDHFQMDEYSYYGVESIATDPVDP--NRVYI 89 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEE-----------ECCTTCCGGGGGGGCEEEEEECSSST--TCEEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEE-----------ECcCccCcccccCCCcceEEeCCCCC--CEEEE
Q ss_pred EcCC--------CcEEEEECCCCCceeeeeeCCCCCc-------eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce
Q psy17688 201 VGAE--------GSVRMFDLRHLEHSTIIYEDPQHTP-------LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV 265 (349)
Q Consensus 201 ~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~ 265 (349)
+... ..-.......++.-..+........ +..++++|.+...++.+...+ -.+|-....++.-
T Consensus 90 ~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g--~gl~~S~DgG~tW 167 (737)
T 2cn3_A 90 VAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG--NGLWRSTDYGVTW 167 (737)
T ss_dssp EECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT--CCEEEESSTTSSC
T ss_pred EecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC--CcEEEeCCCCcce
Q ss_pred eEeecCCcc-----------------eEEEEEeeCCCC------EEEEEcCCCcEEEE
Q psy17688 266 ARLNNHRAC-----------------VNGIAWAPHSSC------HICTAGDDHQALIW 300 (349)
Q Consensus 266 ~~~~~~~~~-----------------v~~~~~~p~~~~------~l~~~~~d~~v~iw 300 (349)
..+..-... +..+.++|.... .+..+..++.-.+|
T Consensus 168 ~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~ 225 (737)
T 2cn3_A 168 SKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIY 225 (737)
T ss_dssp EECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEE
T ss_pred ecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEE
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.14 E-value=1.2e+02 Score=23.85 Aligned_cols=164 Identities=12% Similarity=0.019 Sum_probs=91.5
Q ss_pred CceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688 127 APLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG 205 (349)
Q Consensus 127 ~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~ 205 (349)
..|..+-- +. +...++..+.+|.++-..+.... .. ..+.....+.. .+.+..+...... ..++..+..|
T Consensus 68 e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~-~~----~~G~~~i~lke-gD~l~~~~~~~~~---~~ill~T~~G 137 (276)
T 3no0_A 68 EKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE-YK----AQGMPIIKLTE-GDEVVSIASSVDE---THILLFTKKG 137 (276)
T ss_dssp CCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT-TC----STTEECSCCCT-TCCEEEEEECCSS---CEEEEEETTS
T ss_pred CEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh-hh----cCCeEEEecCC-CCEEEEEEEeCCC---CEEEEEECCC
Confidence 45555533 21 45689999999999999876643 11 11111122333 2345555444444 5788888889
Q ss_pred cEEEEECCCCC------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC------CcceeEeecCCc
Q psy17688 206 SVRMFDLRHLE------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP------CTPVARLNNHRA 273 (349)
Q Consensus 206 ~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~ 273 (349)
.+..++...-. .-...........|..+...+ ++..++..+..| .++...+... ++-+..+ ...+
T Consensus 138 ~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~-~~~~ll~~T~~G-~~kr~~~~e~~~~~R~gkGv~~i-~~~~ 214 (276)
T 3no0_A 138 RVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWN-GEPYLLVITAKG-RVKKISHEEIPKTNRGVKGTEVS-GTKD 214 (276)
T ss_dssp EEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEES-SCSEEEEEETTS-CEEEEEGGGSCCCCTTCCCEECC-CSSS
T ss_pred EEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeC-CCCEEEEEeCCC-cEEEeEHHHcccCCCCCcceEEE-cCCC
Confidence 88887753211 111111123345666665555 566888888899 5888876431 1122222 2234
Q ss_pred ceEEEEEeeCCCCEEEEEcCCCcEEE--EEeec
Q psy17688 274 CVNGIAWAPHSSCHICTAGDDHQALI--WDIQQ 304 (349)
Q Consensus 274 ~v~~~~~~p~~~~~l~~~~~d~~v~i--wd~~~ 304 (349)
.+..+........ ++..+.+|.+.. ++...
T Consensus 215 ~lv~~~~~~~~~~-i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 215 TLVDLIPIKEEVE-LLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp CEEEEEEESSEEE-EEEEETTSCEEEEEEEGGG
T ss_pred cEEEEEEeCCCCE-EEEEcCCCeEEEeeeCHHH
Confidence 4555443333334 666677888877 87665
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.94 E-value=78 Score=31.04 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=28.8
Q ss_pred ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL 268 (349)
Q Consensus 229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~ 268 (349)
.+.+++..+ +..++++-+.|+ ++|+|++.+ +.++.+.
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~-~LRiWsl~t-~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDY-KLKVLDLST-NQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTC-EEEEEETTT-TEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCC-EEEEEECCC-CCeEEee
Confidence 345556666 788999999999 699999997 7666654
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=42.21 E-value=1.4e+02 Score=26.66 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=40.8
Q ss_pred CceeeEEEecCCCCccEEEEEcC------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688 181 KEVYDIAFSRAGGGRDMFASVGA------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM 248 (349)
Q Consensus 181 ~~v~~~~~~~~~~~~~~l~~~~~------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 248 (349)
.....|.|.+++ .+.+.... ...+..++..+++....+ .......++.++|+| +++.|++.-.
T Consensus 476 nsPDnL~fd~~G---~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~P~~aEpnGiafSP-D~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAG---RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSP-DQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTC---CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECT-TSSEEEEEEE
T ss_pred CCCCceEECCCC---CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eCCCCccccCCEECC-CCCEEEEEEe
Confidence 346789999988 56553321 125667777666543333 333456789999999 8887776554
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=39.74 E-value=1.4e+02 Score=26.79 Aligned_cols=59 Identities=14% Similarity=0.185 Sum_probs=38.1
Q ss_pred eeeEEEecCCCCccEEEEEcCC------------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688 183 VYDIAFSRAGGGRDMFASVGAE------------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV 246 (349)
Q Consensus 183 v~~~~~~~~~~~~~~l~~~~~d------------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 246 (349)
.-.|+|+|.+ ++++.-..+ ..+.+.+..+++... +...+...+++.++|+| +++.|++.
T Consensus 478 PDNL~fd~~G---~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r-f~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG---RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR-FMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC---CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE-EEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CcceEECCCC---CEEEEecCCCcccccccccccceEEEEeCCCCeEEE-EEeCCCCccCcCeeECC-CCCEEEEE
Confidence 4568899998 666554332 235555666655433 33445678999999999 77666544
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=39.68 E-value=77 Score=27.98 Aligned_cols=72 Identities=8% Similarity=0.011 Sum_probs=44.2
Q ss_pred ceEEEEEeeCCCC-EEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCceE-EEEEcCCCCceEEEEcCCeEEE
Q psy17688 274 CVNGIAWAPHSSC-HICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEIN-QIQWGATQPDWIAICYNKYLEV 346 (349)
Q Consensus 274 ~v~~~~~~p~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~-~~~~~~~~~~l~~~~~d~~v~v 346 (349)
..++|+....+.+ ++..|+.+|.|.=..+...... ...+..+.. ...+|. .+.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~-~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHG-GVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTE-EEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCcc-ceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4566666654443 5778888998765555432110 011222222 246785 9999999888988888776654
No 375
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=36.91 E-value=1.7e+02 Score=23.75 Aligned_cols=193 Identities=17% Similarity=0.092 Sum_probs=97.7
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC--CC
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR--HL 215 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~ 215 (349)
+...++..+.+|.++--.+........ .+.....+.. .+.+..+...... ..++..+..|.+..+... .-
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r----~G~~~i~lke-~D~lv~~~~~~~~---d~ill~T~~G~~~rf~~~~~ei 179 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRS----GGIVAVNLRD-NDELVGAVLCSAG---DDLLLVSANGQSIRFSATDEAL 179 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCS----SCEESCBCCT-TCCEEEEEEECTT---CEEEEEETTSEEEEEECCTTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhcccc----CceEEEEECC-CCEEEEEEEecCC---CEEEEEECCCeEEEEECccccc
Confidence 467899999999999988776443211 1111123333 3345555444444 567778888888877766 21
Q ss_pred ----C--ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC------Cccee--EeecCCcceEEEEEe
Q psy17688 216 ----E--HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP------CTPVA--RLNNHRACVNGIAWA 281 (349)
Q Consensus 216 ----~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~------~~~~~--~~~~~~~~v~~~~~~ 281 (349)
+ .-...........|.++...+ .+..++..+..| .++.-.+... ++-+. .+..-.+.+..+...
T Consensus 180 p~~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G-~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~ 257 (327)
T 3uc1_A 180 RPMGRATSGVQGMRFNIDDRLLSLNVVR-EGTYLLVATSGG-YAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIV 257 (327)
T ss_dssp CCCCTTSBCEESSCCCTTCCEEEEEECC-TTCEEEEEETTS-EEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEE
T ss_pred CcCCcCCCCeeeecCCCCCEEEEEEEEC-CCCEEEEEeCCC-cEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEe
Confidence 1 001111123345677766655 566888999999 6888775431 11111 122213445555444
Q ss_pred eCCCCEEEEEcCCCcEEEEEeecCCCCCC--CcEEE--EeccCCceEEEEEcC-CCCceEEEEcCC
Q psy17688 282 PHSSCHICTAGDDHQALIWDIQQMPRAIE--DPILA--YTAAGGEINQIQWGA-TQPDWIAICYNK 342 (349)
Q Consensus 282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 342 (349)
.+... ++..+.+|.+.-++......... .-... +.. .+.|.++...+ +...+++.+.+|
T Consensus 258 ~~~~~-i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~-~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 258 DDDSE-LYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGE-GDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp CTTCE-EEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCT-TCCEEEEEECC-------------
T ss_pred CCCcc-EEEEcCCCeEEEEehhhccccCCCCCCeEeEecCC-CCEEEEEEEcCCCcceEEEEecCC
Confidence 44444 66667788887777655321100 00111 111 44566665554 234466555543
No 376
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.70 E-value=1.2e+02 Score=27.06 Aligned_cols=61 Identities=13% Similarity=0.038 Sum_probs=34.8
Q ss_pred ceeeEEEeecCCCceEEEEEeeec-----c--cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688 24 PLYSMNWSVRPDKLFRLAIGSYVE-----E--YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG 88 (349)
Q Consensus 24 ~v~~~~~sp~~~~~~~la~g~~~~-----~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 88 (349)
....|.|.+ +|.+ -.++... . ..+.=.+|.++..++++...........++.++|+||++.
T Consensus 477 sPDnL~fd~--~G~L--Wf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~kt 544 (592)
T 4a9v_A 477 SPDGLGFDK--AGRL--WILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKT 544 (592)
T ss_dssp CEEEEEECT--TCCE--EEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSE
T ss_pred CCCceEECC--CCCE--EEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCE
Confidence 456788887 8874 3333210 0 0111155656666676554332223457899999999983
No 377
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=36.50 E-value=2.5e+02 Score=25.60 Aligned_cols=73 Identities=8% Similarity=-0.001 Sum_probs=42.1
Q ss_pred ceEEEEEe----eCCCC-EEEEEcCCCcEE-EEEeecCCCCCCC--cEEEEe--ccCCceEEEEEcCCCCceEEEEcCCe
Q psy17688 274 CVNGIAWA----PHSSC-HICTAGDDHQAL-IWDIQQMPRAIED--PILAYT--AAGGEINQIQWGATQPDWIAICYNKY 343 (349)
Q Consensus 274 ~v~~~~~~----p~~~~-~l~~~~~d~~v~-iwd~~~~~~~~~~--~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 343 (349)
..+.|+.+ +++.+ ++..|+.+|.|. +.-.......... .+..+. ....+|..+.++++...|++++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 34556553 33433 477888899864 4333221110001 111122 23668999999999999999988887
Q ss_pred EEE
Q psy17688 344 LEV 346 (349)
Q Consensus 344 v~v 346 (349)
++|
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 378
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.73 E-value=89 Score=27.96 Aligned_cols=59 Identities=15% Similarity=0.040 Sum_probs=35.7
Q ss_pred eeeEEEeecCCCceEEEEEeeecc-------cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCC
Q psy17688 25 LYSMNWSVRPDKLFRLAIGSYVEE-------YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRK 87 (349)
Q Consensus 25 v~~~~~sp~~~~~~~la~g~~~~~-------~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 87 (349)
.-.|+|+| .|. |.+++..+. ..+.-.+|-....++++...........++.+.|+||++
T Consensus 478 PDNL~fd~--~G~--LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~ 543 (592)
T 3zwu_A 478 PDGLGFDK--AGR--LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK 543 (592)
T ss_dssp EEEEEECT--TCC--EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS
T ss_pred CcceEECC--CCC--EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCC
Confidence 45678888 887 455543110 012234555565666665443334557899999999987
No 379
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=34.88 E-value=1.8e+02 Score=23.50 Aligned_cols=248 Identities=10% Similarity=0.021 Sum_probs=120.0
Q ss_pred CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---cEEEEECCCCC
Q psy17688 35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---YLRVWRAGEPE 110 (349)
Q Consensus 35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---~i~vw~~~~~~ 110 (349)
+..+ +++-|. +|.|+--.++.-...-.....+...+.+..+......+. +++..+ + .+.++++....
T Consensus 4 ~e~~-~v~lT~----~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~----ll~fT~~Gr~~~~~~~elp~~~ 74 (323)
T 1wp5_A 4 SEDV-IVTVTK----DGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDV----LLLFTNKGNYLYCPVHELPDIR 74 (323)
T ss_dssp CCEE-EEEEET----TCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSE----EEEEETTSEEEEEEGGGSCBCC
T ss_pred CCcE-EEEEeC----CCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCE----EEEEECCCEEEEEEHHHCcCCC
Confidence 5554 677777 899988766422110000111223345555444444432 444444 4 44445544322
Q ss_pred ch-----hheeccCCCCCCCcCceeEE-EecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCce
Q psy17688 111 TR-----LECILNNNKNSDFCAPLTSF-DWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV 183 (349)
Q Consensus 111 ~~-----~~~~~~~~~~~~~~~~i~~~-~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v 183 (349)
.. ....+... ....|.++ ...+ .++..++..+.+|.++--.+........ ..+.....+... +.+
T Consensus 75 r~a~G~~i~~~i~L~----~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r---~~G~~ai~l~e~-d~l 146 (323)
T 1wp5_A 75 WKDLGQHIANIIPID----RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY---SKPLTGINLKND-DQV 146 (323)
T ss_dssp TTSCCEEGGGTSCCC----TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC---SSCEECSCCCTT-CCE
T ss_pred CCCCCcChhhccCCC----CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc---cCceEEEEeCCC-CEE
Confidence 10 11111111 11345544 2321 1255789999999999988765433210 011111223322 455
Q ss_pred eeEEEecCCCCccEEEEEcCCCcEEEEECCCC----C--ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688 184 YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL----E--HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD 257 (349)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~----~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d 257 (349)
..+...... ..++..+.+|.+..++...- + .............|.++..-+.+...+++.+..| ..+..+
T Consensus 147 v~~~~~~~~---~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G-~gKr~~ 222 (323)
T 1wp5_A 147 VDVHLTDGM---NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRG-AVKKMK 222 (323)
T ss_dssp EEEEEECSC---SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTS-EEEEEE
T ss_pred EEEEEeCCC---CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCC-ceEEEE
Confidence 555544444 56778888888888876431 1 0111111223455666655442332788888888 577777
Q ss_pred ccCC------CcceeE---eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688 258 VRVP------CTPVAR---LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 258 ~~~~------~~~~~~---~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~ 304 (349)
+... ++-+.. +......+..+....++.. ++..+.+|.+.-..+..
T Consensus 223 ~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~-i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 223 LTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDT-IYLQTEKSFIETIKVGD 277 (323)
T ss_dssp GGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCE-EEEEETTSCEEEEEGGG
T ss_pred HHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCe-EEEEeCCCeEEEEEhhh
Confidence 6431 111111 2222224543333333444 55666777777666665
No 380
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=34.38 E-value=36 Score=19.99 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=17.7
Q ss_pred CCeEEEEeccccccccccceEe
Q psy17688 50 NNKVQIVALNEDISEFGPKSTI 71 (349)
Q Consensus 50 ~g~i~i~~~~~~~~~~~~~~~~ 71 (349)
+|.|+||.++++++++.....+
T Consensus 37 ~g~iKIykyde~tNeI~LkKE~ 58 (72)
T 3kvp_A 37 DGYIKIYEYNESRNEVKLKKEY 58 (72)
T ss_dssp TTEEEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEEeCCCCCeEEEEEee
Confidence 7899999999998887665543
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=32.85 E-value=2.1e+02 Score=23.69 Aligned_cols=195 Identities=9% Similarity=0.003 Sum_probs=0.0
Q ss_pred CCCCCeEEEEEcCCeEEEEeccCcc--------eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688 136 EVDPNLLGTSSIDTTCTIWCLETNQ--------VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV 207 (349)
Q Consensus 136 ~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v 207 (349)
| +...+++.+.+|.|+--.+...+ .. ..-....+.+..+...... ..++..+..|.+
T Consensus 5 ~-~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~-----------~~~lke~D~l~~~~~~~t~---d~ll~fT~~G~~ 69 (370)
T 3l6v_A 5 A-PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRS-----------AASTKEEDFIDQLWLVNTH---DTLLTFTSSGKV 69 (370)
T ss_dssp C-CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSE-----------EEECSCCCCEEEEEEECTT---CEEEEEETTSEE
T ss_pred c-CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCce-----------ecccCCCCEEEEEEEecCC---CEEEEEeCCCeE
Q ss_pred EEEE---------CCCCCceeeeeeCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccC------CCcceeEeec
Q psy17688 208 RMFD---------LRHLEHSTIIYEDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRV------PCTPVARLNN 270 (349)
Q Consensus 208 ~iwd---------~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~------~~~~~~~~~~ 270 (349)
+-+. ...+.+...+........|.++..-+. ...+|+.++..| .++-..+.. .+.....+..
T Consensus 70 ~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G-~vKrt~l~e~~~~~~~G~~ai~L~~ 148 (370)
T 3l6v_A 70 FWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNG-TVKKTPLSEFAFRLARGKIAINLDE 148 (370)
T ss_dssp EEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGCSCCTTCEESSCCCT
T ss_pred EEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCC-eEEEeEHHHhhcccCCceEEEEeCC
Q ss_pred CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec----CCCCCCCcEEEEeccCCceEEEEEcC----------------
Q psy17688 271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ----MPRAIEDPILAYTAAGGEINQIQWGA---------------- 330 (349)
Q Consensus 271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~---------------- 330 (349)
.+.+..+........ ++..+.+|.+..++... +..........+.. ...|.++...+
T Consensus 149 -~d~lv~v~~~~~~~~-i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~ 225 (370)
T 3l6v_A 149 -GDALVGVALTDGDRD-VLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEE 225 (370)
T ss_dssp -TCCEEEEEEECSCCE-EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC--------------
T ss_pred -CCEEEEEEEeCCCce-EEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEeccccccccccccccccc
Q ss_pred -------------------CCCceEEEEcCCeEEEeeC
Q psy17688 331 -------------------TQPDWIAICYNKYLEVLRV 349 (349)
Q Consensus 331 -------------------~~~~l~~~~~d~~v~vw~v 349 (349)
.+..++..+..|..+...+
T Consensus 226 ~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~ 263 (370)
T 3l6v_A 226 VVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPL 263 (370)
T ss_dssp ---------------------CEEEEEETTSEEEEEEG
T ss_pred cccccccccccccccccccCCceEEEeeCCCCEEEEEH
No 382
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=29.69 E-value=2.6e+02 Score=24.54 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=43.4
Q ss_pred ceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-ccCCce-EEEEEcCCCCceEEEEcCCeEEE
Q psy17688 274 CVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-AAGGEI-NQIQWGATQPDWIAICYNKYLEV 346 (349)
Q Consensus 274 ~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~v~v 346 (349)
..+.|+... ++..++..|+.+|.|.-.-+..... ...+..+. ....+| ..+.++++...|++++..+.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~--~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSD--GHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCC--SCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCC--eeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 356666654 3434577888899876443332111 11122222 235678 48999998888999888877765
No 383
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=28.78 E-value=64 Score=29.60 Aligned_cols=26 Identities=8% Similarity=0.149 Sum_probs=22.1
Q ss_pred cEEEEEcCCCcEEEEECCCCCceeee
Q psy17688 196 DMFASVGAEGSVRMFDLRHLEHSTII 221 (349)
Q Consensus 196 ~~l~~~~~d~~v~iwd~~~~~~~~~~ 221 (349)
.++++-+.|.++|+||++++++....
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEee
Confidence 69999999999999999998755433
No 384
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.12 E-value=2.8e+02 Score=24.07 Aligned_cols=58 Identities=9% Similarity=-0.055 Sum_probs=35.6
Q ss_pred cEEEEEcCCCcEEEEEC-CCCC-------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688 196 DMFASVGAEGSVRMFDL-RHLE-------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII 255 (349)
Q Consensus 196 ~~l~~~~~d~~v~iwd~-~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v 255 (349)
..+..|+.+|.|+=.-+ .... ....+.......+|..|.+++ ....|++++.++ .++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~-V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG-VAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC-EEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe-EEEE
Confidence 46777888887753333 2211 011111112357899999999 889999999887 4544
No 385
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=25.05 E-value=2.9e+02 Score=25.19 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=36.4
Q ss_pred cEEEEEcCCCcEE-EEECCCCCc-------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688 196 DMFASVGAEGSVR-MFDLRHLEH-------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII 255 (349)
Q Consensus 196 ~~l~~~~~d~~v~-iwd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v 255 (349)
..+..|+.+|.|+ +........ ...+.......+|..|.+++ +...|++++..+ .++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~-~~~~LYV~t~~~-V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG-VAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET-TTTEEEEEBSSC-EEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC-CCCEEEEEECCE-EEEE
Confidence 4677788888875 333222110 11112234567899999999 889999999888 4554
No 386
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=24.46 E-value=89 Score=28.43 Aligned_cols=70 Identities=6% Similarity=-0.043 Sum_probs=40.2
Q ss_pred eEEEEEe----eCCC--CEEEEEcCCCcEEEE-EeecCCCCCCCcEEEEeccCCceEEEEEcCCC--CceEEEEcCCeEE
Q psy17688 275 VNGIAWA----PHSS--CHICTAGDDHQALIW-DIQQMPRAIEDPILAYTAAGGEINQIQWGATQ--PDWIAICYNKYLE 345 (349)
Q Consensus 275 v~~~~~~----p~~~--~~l~~~~~d~~v~iw-d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~ 345 (349)
.+.|+.. .++. .++..|+.+|.|.=. ....... ..+.+..+. ...+|..+.++++. ..|++++.++.++
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~-~~ee~~~~~-~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVH-IIEETQLFQ-DFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEE-EEEEEECCT-TCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCce-EEEEecccC-CCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 4566653 2332 257788889976433 3222110 000111121 25689999999987 8888888877666
Q ss_pred E
Q psy17688 346 V 346 (349)
Q Consensus 346 v 346 (349)
|
T Consensus 477 v 477 (663)
T 1olz_A 477 A 477 (663)
T ss_dssp E
T ss_pred E
Confidence 5
No 387
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.77 E-value=3.2e+02 Score=22.78 Aligned_cols=189 Identities=7% Similarity=0.053 Sum_probs=94.0
Q ss_pred cEEEEECCCC--CchhheeccCCCCCCCcCceeEEEec---CC---CCCeEEEEE-cCCeEEEEeccCcceeeeecccC-
Q psy17688 100 YLRVWRAGEP--ETRLECILNNNKNSDFCAPLTSFDWN---EV---DPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVS- 169 (349)
Q Consensus 100 ~i~vw~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~---~~---~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~- 169 (349)
.|.+||+.++ +......+...... ....+..+.+. |. +..++.... ..+.|.++|+.+++..+......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 7889999887 53333333221111 12456777776 21 133444443 45789999999988875442110
Q ss_pred Cc--eeeeeecc----CCceeeEEEecCCCC-ccEEEEEcCCC-cEEEEE---CCCCC---ceeeeeeCCCCCceeEEEE
Q psy17688 170 GH--VKTQLIAH----DKEVYDIAFSRAGGG-RDMFASVGAEG-SVRMFD---LRHLE---HSTIIYEDPQHTPLLRLAW 235 (349)
Q Consensus 170 ~~--~~~~~~~~----~~~v~~~~~~~~~~~-~~~l~~~~~d~-~v~iwd---~~~~~---~~~~~~~~~~~~~v~~~~~ 235 (349)
.. ......+. ...+..++++|+..+ .+.|.-....+ .+.--. ++... ....+........-..++.
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 00 00111111 246889999997110 14555554443 333322 22221 1222222111234455677
Q ss_pred eCCCCCeEEEEeeCCcEEEEEeccC-CC--cceeEeec--CCcceEEEEEeeCCCCEEEEE
Q psy17688 236 NKQDPNYLAMVAMNACEVIILDVRV-PC--TPVARLNN--HRACVNGIAWAPHSSCHICTA 291 (349)
Q Consensus 236 ~~~~~~~l~~~~~d~~~i~v~d~~~-~~--~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~ 291 (349)
++.++.++++--..+ .|..|+... +- .....+.. .-..+..+++.++|.. .++.
T Consensus 283 D~~~G~ly~~~~~~~-aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~L-wv~s 341 (381)
T 3q6k_A 283 DPKTKVIFFAEANTK-QVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGL-WFMS 341 (381)
T ss_dssp CTTTCEEEEEESSSS-EEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCE-EEEE
T ss_pred eCCCCeEEEEeccCC-eEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeE-EEEE
Confidence 643666666666666 599999874 22 12222221 1234667777666654 4433
No 388
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.60 E-value=2.8e+02 Score=25.23 Aligned_cols=58 Identities=2% Similarity=-0.005 Sum_probs=35.7
Q ss_pred CeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcceEEEEEeeCC--CCEEEEEcCCCcEEE
Q psy17688 241 NYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACVNGIAWAPHS--SCHICTAGDDHQALI 299 (349)
Q Consensus 241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~~p~~--~~~l~~~~~d~~v~i 299 (349)
..++.|+.+|...++.........+..+. ....+|..+.++++. .+ |..++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~-Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRF-VYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCE-EEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccE-EEEEEcCeEEEE
Confidence 36778888885445545443122222222 234688899999987 77 777777665544
No 389
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=20.47 E-value=4.5e+02 Score=23.33 Aligned_cols=73 Identities=8% Similarity=-0.032 Sum_probs=42.9
Q ss_pred ceEEEEEeeC----CC-CEEEEEcCCCcEE-EEEeecCCC-CCCC-cEEEEec-----------cCCceEEEEEcCCCCc
Q psy17688 274 CVNGIAWAPH----SS-CHICTAGDDHQAL-IWDIQQMPR-AIED-PILAYTA-----------AGGEINQIQWGATQPD 334 (349)
Q Consensus 274 ~v~~~~~~p~----~~-~~l~~~~~d~~v~-iwd~~~~~~-~~~~-~~~~~~~-----------~~~~v~~~~~~~~~~~ 334 (349)
..+.|+.... +. .++..|+.+|.|. +........ .... .+..+.. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 4578877752 22 3577888999875 332221110 0011 1112221 1457889999999888
Q ss_pred eEEEEcCCeEEE
Q psy17688 335 WIAICYNKYLEV 346 (349)
Q Consensus 335 l~~~~~d~~v~v 346 (349)
|++++.++.++|
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999888887765
No 390
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=20.27 E-value=3.3e+02 Score=21.67 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=86.0
Q ss_pred CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH 217 (349)
Q Consensus 138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 217 (349)
+...++..+.+|.++--.+........ .+.....+..+ +.+..+...... ..++..+.+|.+..++...-..
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r----~G~~~i~l~~~-d~lv~~~~~~~~---~~i~l~T~~G~~irf~~~~v~~ 179 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRT----AGKVAIKLVDG-DELIGVDLTSGE---DEVMLFSAEGKVVRFKESSVRA 179 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCT----TCEESSCCCTT-CCEEEEEEECTT---CEEEEEETTSEEEEEEGGGSCB
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhcccc----CCeEEEEECCC-CEEEEEEEeCCC---CEEEEECCCCcEEEEEHHHcCc
Confidence 456788999999999987764333210 11111223333 455555554444 4677788888887777643110
Q ss_pred ------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC--------cceeEeecCCcceEEEEEeeC
Q psy17688 218 ------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC--------TPVARLNNHRACVNGIAWAPH 283 (349)
Q Consensus 218 ------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~--------~~~~~~~~~~~~v~~~~~~p~ 283 (349)
............|.++..-+ ++..+++.+..| .++-.++.... .....+....+.+..+....+
T Consensus 180 ~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G-~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~ 257 (307)
T 1zi0_A 180 MGCNTTGVRGIRLGEGDKVVSLIVPR-GDGAILTATQNG-YGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDD 257 (307)
T ss_dssp CCTTCCCEECCCCCTTCCEEEEECCC-SSCEEEEEETTS-EEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECT
T ss_pred cCCCCCCeEeEEeCCCCEEEEEEEec-CCCEEEEEEcCC-ceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCC
Confidence 11111122345666665544 456788888888 58887763210 111222223355555544434
Q ss_pred CCCEEEEEcCCCcEEEEEeec
Q psy17688 284 SSCHICTAGDDHQALIWDIQQ 304 (349)
Q Consensus 284 ~~~~l~~~~~d~~v~iwd~~~ 304 (349)
... ++..+.+|.+.-+++..
T Consensus 258 ~~~-l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 258 CDQ-IMMITDAGTLVRTRVSE 277 (307)
T ss_dssp TCE-EEEEESSCCEEEEEGGG
T ss_pred Cce-EEEEcCCCcEEEEeccc
Confidence 444 55666778777776665
Done!